BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041265
(309 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225446170|ref|XP_002271585.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic [Vitis vinifera]
gi|297735326|emb|CBI17766.3| unnamed protein product [Vitis vinifera]
Length = 735
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/382 (56%), Positives = 243/382 (63%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQTCGL E+++DAFG GHSSTSISAGL GMAVGRDLLGKNN
Sbjct: 175 MHTIRQTCGLAGFPKRDESIYDAFGAGHSSTSISAGL----------GMAVGRDLLGKNN 224
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NNAG L+KA
Sbjct: 225 HVISVIGDGAMTAGQAYEAMNNAGYLDSNLIIILNDNGQVSLPTATVDGPAPPVGALSKA 284
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L L S+ +FRQL + A K ++ GGQ HEI D + R + GS AC FE+LGLY
Sbjct: 285 LTNLQSSRKFRQLREAA---KGFTKQVGGQAHEIAAKVDEYMRGMVGGSNACLFEELGLY 341
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL-------------- 184
YIGPVDGHN+EDL ++LK+V+A+P PG VL+HVITEK K P ++
Sbjct: 342 YIGPVDGHNVEDLVHILKKVRAMPAPGPVLVHVITEKGKGYAPAEVAADKMHGVVKFDAM 401
Query: 185 --------QQTRLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVG 219
+TR + + MGGGTGLNLFQKHFP RCFDVG
Sbjct: 402 SGKQLKTKSKTRSYTQYFAESLIAEAERDENIIAIHAAMGGGTGLNLFQKHFPDRCFDVG 461
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR FDQVAHDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 462 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGFDQVAHDVDLQKLPVRFAMDRAGLVGAD 521
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFDTTFMACLPNMVVM
Sbjct: 522 GPTHCGAFDTTFMACLPNMVVM 543
>gi|147803271|emb|CAN71054.1| hypothetical protein VITISV_003721 [Vitis vinifera]
Length = 1638
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/382 (56%), Positives = 243/382 (63%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQTCGL E+++DAFG GHSSTSISAGL GMAVGRDLLGKNN
Sbjct: 175 MHTIRQTCGLAGFPKRDESIYDAFGAGHSSTSISAGL----------GMAVGRDLLGKNN 224
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NNAG L+KA
Sbjct: 225 HVISVIGDGAMTAGQAYEAMNNAGYLDSNLIIILNDNGQVSLPTATVDGPAPPVGALSKA 284
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L L S+ +FRQL + A K ++ GGQ HEI D + R + GS AC FE+LGLY
Sbjct: 285 LTNLQSSRKFRQLREAA---KGFTKQVGGQAHEIAAKVDEYMRGMVGGSNACLFEELGLY 341
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL-------------- 184
YIGPVDGHN+EDL ++LK+V+A+P PG VL+HVITEK K P ++
Sbjct: 342 YIGPVDGHNVEDLVHILKKVRAMPAPGPVLVHVITEKGKGYAPAEVAADKMHGVVKFDAM 401
Query: 185 --------QQTRLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVG 219
+TR + + MGGGTGLNLFQKHFP RCFDVG
Sbjct: 402 SGKQLKTKSKTRSYTQYFAESLIAEAERDENIIAIHAAMGGGTGLNLFQKHFPDRCFDVG 461
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR FDQVAHDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 462 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGFDQVAHDVDLQKLPVRFAVDRAGLVGAD 521
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFDTTFMACLPNMVVM
Sbjct: 522 GPTHCGAFDTTFMACLPNMVVM 543
>gi|297735368|emb|CBI17808.3| unnamed protein product [Vitis vinifera]
Length = 808
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/382 (56%), Positives = 242/382 (63%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+VHDAFG GHSSTSISAGL GMAV RDLL KNN
Sbjct: 247 MHTIRQTSGLAGFPKRDESVHDAFGAGHSSTSISAGL----------GMAVARDLLRKNN 296
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVI+VI +GA A +YEA+NNAG L+KA
Sbjct: 297 HVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIIILNDNNQVSLPTATADGPAPPVGALSKA 356
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
LKRL S+ +F+QL Q A K ++ GGQ HEI D + R + G ACFFE+LGL+
Sbjct: 357 LKRLQSSRKFQQLHQTA---KAITERVGGQAHEIAAKVDLYLRGMINGLGACFFEELGLH 413
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+E+L ++LK VKAIP GAVLIH++TEK K P +
Sbjct: 414 YIGPVDGHNMEELVHILKVVKAIPGQGAVLIHIVTEKGKGYAPAEAAPDKMHGVVKFDPH 473
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLNLFQK FP RCFDVG
Sbjct: 474 SGKQLKSKSSTLSYTQYFAESLIAEAERDDKIVAIHAAMGGGTGLNLFQKRFPNRCFDVG 533
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR FDQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 534 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRAFDQVVHDVDLQKLPVRFAMDRAGLVGAD 593
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFDTTFMACLPNMVVM
Sbjct: 594 GPTHCGAFDTTFMACLPNMVVM 615
>gi|225446107|ref|XP_002270336.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Vitis vinifera]
Length = 731
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/382 (56%), Positives = 242/382 (63%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+VHDAFG GHSSTSISAGL GMAV RDLL KNN
Sbjct: 170 MHTIRQTSGLAGFPKRDESVHDAFGAGHSSTSISAGL----------GMAVARDLLRKNN 219
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVI+VI +GA A +YEA+NNAG L+KA
Sbjct: 220 HVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIIILNDNNQVSLPTATADGPAPPVGALSKA 279
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
LKRL S+ +F+QL Q A K ++ GGQ HEI D + R + G ACFFE+LGL+
Sbjct: 280 LKRLQSSRKFQQLHQTA---KAITERVGGQAHEIAAKVDLYLRGMINGLGACFFEELGLH 336
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+E+L ++LK VKAIP GAVLIH++TEK K P +
Sbjct: 337 YIGPVDGHNMEELVHILKVVKAIPGQGAVLIHIVTEKGKGYAPAEAAPDKMHGVVKFDPH 396
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLNLFQK FP RCFDVG
Sbjct: 397 SGKQLKSKSSTLSYTQYFAESLIAEAERDDKIVAIHAAMGGGTGLNLFQKRFPNRCFDVG 456
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR FDQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 457 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRAFDQVVHDVDLQKLPVRFAMDRAGLVGAD 516
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFDTTFMACLPNMVVM
Sbjct: 517 GPTHCGAFDTTFMACLPNMVVM 538
>gi|147855372|emb|CAN83878.1| hypothetical protein VITISV_003880 [Vitis vinifera]
Length = 713
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/382 (56%), Positives = 242/382 (63%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+VHDAFG GHSSTSISAGL GMAV RDLL KNN
Sbjct: 152 MHTIRQTSGLAGFPKRDESVHDAFGAGHSSTSISAGL----------GMAVARDLLRKNN 201
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVI+VI +GA A +YEA+NNAG L+KA
Sbjct: 202 HVIAVIGDGAMTAGQAYEAMNNAGYLDSNXIIILNDNNQVSLPTATADGPAPPVGALSKA 261
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
LKRL S+ +F+QL Q A K ++ GGQ HEI D + R + G ACFFE+LGL+
Sbjct: 262 LKRLQSSRKFQQLHQTA---KAITERVGGQAHEIAAKVDLYLRGMINGLGACFFEELGLH 318
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+E+L ++LK VKAIP GAVLIH++TEK K P +
Sbjct: 319 YIGPVDGHNMEELVHILKVVKAIPGQGAVLIHIVTEKGKGYAPAEAAPDKMHGVVKFDPH 378
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLNLFQK FP RCFDVG
Sbjct: 379 SGKQLKSKSSTLSYTQYFAESLIAEAERDDKIVAIHAAMGGGTGLNLFQKRFPNRCFDVG 438
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR FDQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 439 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRAFDQVVHDVDLQKLPVRFAMDRAGLVGAD 498
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFDTTFMACLPNMVVM
Sbjct: 499 GPTHCGAFDTTFMACLPNMVVM 520
>gi|359485061|ref|XP_002271782.2| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Vitis vinifera]
Length = 815
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/382 (55%), Positives = 238/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQTCGL E+++DAFG GHSSTSISAGL GMA GRDLLGKNN
Sbjct: 255 MHTIRQTCGLAGFPKRDESIYDAFGAGHSSTSISAGL----------GMAAGRDLLGKNN 304
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VISVI +GA A +YEA+NNAG L+KA
Sbjct: 305 NVISVIGDGAMTAGQAYEAMNNAGYLDSNLIIILNDNGQVSLPTATVDGPAPPVGALSKA 364
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L L S+ +FRQL + A K + GGQ HEI D + R I GS AC FE+LGL
Sbjct: 365 LTNLQSSRKFRQLREAA---KGFTKHVGGQAHEIAAKVDEYMRGIVGGSHACLFEELGLS 421
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL ++L +V+ +P PG VL+HVITEK K P +
Sbjct: 422 YIGPVDGHNVEDLVHILTKVRVMPAPGPVLVHVITEKGKGYAPAEVAADKMHGVVKFDAM 481
Query: 184 -----------LQQTRLFCKIL-------DN------RMGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L +N MGGGTGLNLFQK FP RCFDVG
Sbjct: 482 SGKQLKTKSKTLSHTQYFAESLIAEAERDENIVAIHAAMGGGTGLNLFQKRFPDRCFDVG 541
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGL EGLKPFCAIYSSFLQR FDQVAHDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 542 IAEQHAVTFAAGLDTEGLKPFCAIYSSFLQRGFDQVAHDVDLQKLPVRFAMDRAGLVGAD 601
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFDTTFMACLPNMVVM
Sbjct: 602 GPTHCGAFDTTFMACLPNMVVM 623
>gi|449500270|ref|XP_004161053.1| PREDICTED: LOW QUALITY PROTEIN: probable
1-deoxy-D-xylulose-5-phosphate synthase 2,
chloroplastic-like [Cucumis sativus]
Length = 724
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/382 (55%), Positives = 239/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+VHDAFGVGHSSTSISAGL GMAVGRD+LGKNN
Sbjct: 164 MHTIRQTFGLAGFPKREESVHDAFGVGHSSTSISAGL----------GMAVGRDILGKNN 213
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HV+SVI +GA M+YEA+NNAG LNKA
Sbjct: 214 HVVSVIGDGAMTGGMAYEALNNAGYLDSNLIVILNDNRQVSLPTATIDGPATPVGALNKA 273
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEIDA----FSREIEAGSRACFFEDLGLY 138
L +L ++ + RQL + A K ++ GG+ H I A R + G+ A FE+LG+Y
Sbjct: 274 LTKLQASKKLRQLREAA---KAVSKQMGGETHGIAAKVEHCVRGMVGGTGASLFEELGIY 330
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL Y+LKQVKA+P G VLIHVITEK K P +
Sbjct: 331 YIGPVDGHNVEDLVYILKQVKAMPASGPVLIHVITEKGKGYPPAEIAADKMHGVVNFDPK 390
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F L D++ MGGGTGLN FQK FP RCFDVG
Sbjct: 391 SGKQMKKKTETLSYTQYFADSLIAEAERDDKIVAIHAAMGGGTGLNYFQKQFPNRCFDVG 450
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQVAHDVDLQKLPVRFAIDRAGLVGAD
Sbjct: 451 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRAYDQVAHDVDLQKLPVRFAIDRAGLVGAD 510
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFDTTFMACLPNMVVM
Sbjct: 511 GPTHCGAFDTTFMACLPNMVVM 532
>gi|224117606|ref|XP_002331678.1| predicted protein [Populus trichocarpa]
gi|222874097|gb|EEF11228.1| predicted protein [Populus trichocarpa]
Length = 646
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/382 (55%), Positives = 240/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ HDAFG GHSSTSISA L GMAVGRDLLGK+N
Sbjct: 97 MHTIRQTFGLAGFPKREESEHDAFGAGHSSTSISAAL----------GMAVGRDLLGKDN 146
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVI+VI +GA A +YEA+NNAG L++A
Sbjct: 147 HVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIIILNDNRQVSLPTATVDGPAPPVGALSRA 206
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L RLHS+ +FRQL + A K ++ GGQ EI D++ R + S AC FE+LGLY
Sbjct: 207 LTRLHSSRKFRQLREAA---KGITKQIGGQTQEIAAKVDSYMRGMTGASGACLFEELGLY 263
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL +LK+VKA+P PG VLIHVITEK K P +
Sbjct: 264 YIGPVDGHNVEDLVDLLKKVKAMPAPGPVLIHVITEKGKGYTPAEVAADKMHGVVKFDTK 323
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLNLFQK FP RCFDVG
Sbjct: 324 TGKQLKSKSNTLSYTQYFAESLIAEAEKDDKIVAIHAAMGGGTGLNLFQKRFPYRCFDVG 383
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 384 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFALDRAGLVGAD 443
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFDTTFMA LPNMVVM
Sbjct: 444 GPTHCGAFDTTFMASLPNMVVM 465
>gi|297735323|emb|CBI17763.3| unnamed protein product [Vitis vinifera]
Length = 690
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/382 (55%), Positives = 238/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQTCGL E+++DAFG GHSSTSISAGL GMA GRDLLGKNN
Sbjct: 130 MHTIRQTCGLAGFPKRDESIYDAFGAGHSSTSISAGL----------GMAAGRDLLGKNN 179
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VISVI +GA A +YEA+NNAG L+KA
Sbjct: 180 NVISVIGDGAMTAGQAYEAMNNAGYLDSNLIIILNDNGQVSLPTATVDGPAPPVGALSKA 239
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L L S+ +FRQL + A K + GGQ HEI D + R I GS AC FE+LGL
Sbjct: 240 LTNLQSSRKFRQLREAA---KGFTKHVGGQAHEIAAKVDEYMRGIVGGSHACLFEELGLS 296
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL ++L +V+ +P PG VL+HVITEK K P +
Sbjct: 297 YIGPVDGHNVEDLVHILTKVRVMPAPGPVLVHVITEKGKGYAPAEVAADKMHGVVKFDAM 356
Query: 184 -----------LQQTRLFCKIL-------DN------RMGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L +N MGGGTGLNLFQK FP RCFDVG
Sbjct: 357 SGKQLKTKSKTLSHTQYFAESLIAEAERDENIVAIHAAMGGGTGLNLFQKRFPDRCFDVG 416
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGL EGLKPFCAIYSSFLQR FDQVAHDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 417 IAEQHAVTFAAGLDTEGLKPFCAIYSSFLQRGFDQVAHDVDLQKLPVRFAMDRAGLVGAD 476
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFDTTFMACLPNMVVM
Sbjct: 477 GPTHCGAFDTTFMACLPNMVVM 498
>gi|449457233|ref|XP_004146353.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2,
chloroplastic-like [Cucumis sativus]
Length = 721
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/382 (55%), Positives = 239/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+VHDAFGVGHSSTSISAGL GMAVGRD+LGKNN
Sbjct: 161 MHTIRQTFGLAGFPKREESVHDAFGVGHSSTSISAGL----------GMAVGRDILGKNN 210
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HV+SVI +GA M+YEA+NNAG LNKA
Sbjct: 211 HVVSVIGDGAMTGGMAYEALNNAGYLDSNLIVILNDNRQVSLPTATIDGPATPVGALNKA 270
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEIDA----FSREIEAGSRACFFEDLGLY 138
L +L ++ + RQL + A K ++ GG+ H I A R + G+ A FE+LG+Y
Sbjct: 271 LTKLQASKKLRQLREAA---KAVSKQMGGETHGIAAKVEHCVRGMVGGTGASLFEELGIY 327
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL Y+LKQVKA+P G VLIHVITEK K P +
Sbjct: 328 YIGPVDGHNVEDLVYILKQVKAMPASGPVLIHVITEKGKGYPPAEIAADKMHGVVNFDPK 387
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F L D++ MGGGTGLN FQK FP RCFDVG
Sbjct: 388 SGKQMKKKTETLSYTQYFADSLIAEAERDDKIVAIHAAMGGGTGLNYFQKQFPNRCFDVG 447
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQVAHDVDLQKLPVRFAIDRAGLVGAD
Sbjct: 448 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRAYDQVAHDVDLQKLPVRFAIDRAGLVGAD 507
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFDTTFMACLPNMVVM
Sbjct: 508 GPTHCGAFDTTFMACLPNMVVM 529
>gi|255586041|ref|XP_002533688.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
gi|223526414|gb|EEF28696.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
Length = 728
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 208/382 (54%), Positives = 240/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +IRQT GL E+ HDAFG GHSSTSISAGL GMAVGRDL+GKNN
Sbjct: 168 MSSIRQTFGLAGFPKRDESEHDAFGAGHSSTSISAGL----------GMAVGRDLVGKNN 217
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVI+VI +GA A +YEA+NNAG L+KA
Sbjct: 218 HVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIIILNDNKQVSLPTATVDGPAPPVGALSKA 277
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L S+ + RQL + A K ++ GGQ HEI D + R + AGS A FE+LGLY
Sbjct: 278 LTKLQSSRKIRQLREAA---KGITKQIGGQTHEIAAKVDTYVRGMAAGSGASLFEELGLY 334
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL-------------- 184
YIGPVDGH++EDL +LK+VK++P PG VLIHVITEK K P ++
Sbjct: 335 YIGPVDGHSVEDLVTILKKVKSLPAPGPVLIHVITEKGKGYSPAEVAADKMHGVVKFDPT 394
Query: 185 ------------QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
T+ F + L D++ MGGGTGLNLFQK FP +CFDVG
Sbjct: 395 SGKQLKSKSNTKSYTQYFAESLIAEAEQDDKIVAIHAAMGGGTGLNLFQKQFPEKCFDVG 454
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFAIDRAGLVGAD
Sbjct: 455 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAIDRAGLVGAD 514
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 515 GPTHCGAFDVTYMACLPNMVVM 536
>gi|113473649|gb|ABI35993.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Catharanthus roseus]
Length = 740
Score = 363 bits (932), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 204/382 (53%), Positives = 239/382 (62%), Gaps = 95/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQTCGL E+ HDAFGVGHSSTSISAGL GMA+GRDLLGK N
Sbjct: 181 MHTMRQTCGLAGFPKRDESAHDAFGVGHSSTSISAGL----------GMAIGRDLLGKKN 230
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVI+VI +GA A +YEA+NNAG L+ A
Sbjct: 231 HVITVIGDGAMTAGQAYEAMNNAGYLDSNLIIILNDNKQVSLPTATIDGPAPPTGALSNA 290
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL S+ +FR L + A K ++ GGQ+HE +D + R + + RA FEDLG+Y
Sbjct: 291 LTRLQSSRKFRLLREAA---KGVTKQLGGQVHEMAAKVDTYMRGMNS-QRASLFEDLGMY 346
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL-------------- 184
YIGP+DGHN+EDL +L++VK++P G VLIH+ITEK K P +
Sbjct: 347 YIGPLDGHNMEDLVDILEKVKSVPATGPVLIHIITEKGKGYPPAEAAADKMHGVVKFEPM 406
Query: 185 ------------QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
T F + L D++ MGGGTGLNLFQKHFP RCFDVG
Sbjct: 407 TGKQFKSRSKTKSYTNYFAESLISEAREDDKIIAIHAAMGGGTGLNLFQKHFPERCFDVG 466
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA+EGLKPFCAIYSSFLQR +DQV HDVDLQK+PVRFA+DRAGLVGAD
Sbjct: 467 IAEQHAVTFAAGLASEGLKPFCAIYSSFLQRGYDQVVHDVDLQKIPVRFAMDRAGLVGAD 526
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCG FDTTFMACLPNMVVM
Sbjct: 527 GPTHCGTFDTTFMACLPNMVVM 548
>gi|256619606|emb|CAZ66649.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 precursor [Solanum
lycopersicum]
Length = 714
Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/382 (53%), Positives = 238/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R+T GL E+VHDAFG GHSSTSISAGL GMAV RDLLG NN
Sbjct: 156 MHTMRKTSGLAPFPKRDESVHDAFGAGHSSTSISAGL----------GMAVARDLLGNNN 205
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NNAG L+ A
Sbjct: 206 HVISVIGDGAMTAGQAYEAMNNAGFLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSA 265
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L ++ +FRQL + A K ++ G Q HE+ D ++R + + S + FE+LGLY
Sbjct: 266 LSKLQASLKFRQLREAA---KTITKQIGPQAHEVAAKVDEYARGMLSASGSTLFEELGLY 322
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL +L++VKA+P PG VLIH++TEK K LP +
Sbjct: 323 YIGPVDGHNIEDLITILEKVKALPAPGPVLIHIVTEKGKGYLPAEAADDKMHGVAQFDPK 382
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L DN+ MGGGTGLN FQK FP RCFDVG
Sbjct: 383 TGKQFKAKSPTLTYTQYFAESLIKEAENDNKIVAIHAAMGGGTGLNYFQKQFPERCFDVG 442
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 443 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 502
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 503 GPTHCGAFDVTYMACLPNMVVM 524
>gi|291170708|gb|ADD82535.1| 1-deoxyxylulose-5-phosphate synthase [Narcissus tazetta var.
chinensis]
Length = 634
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 203/382 (53%), Positives = 237/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+VHDAFG GHSSTSISAGL GMAV RDLLGK N
Sbjct: 76 MHTLRQTSGLAGFPKRDESVHDAFGAGHSSTSISAGL----------GMAVARDLLGKGN 125
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK-------------------------------A 82
HVISVI +GA A +YEA+NNAG L+ A
Sbjct: 126 HVISVIGDGAMTAGQAYEAMNNAGYLDSNLIVVLNDNKQVSLPTATLDGPATPVGALSGA 185
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L ++ +FRQL + A K ++ GGQ HE+ D ++R + + S AC FE+LGLY
Sbjct: 186 LAKLQASTKFRQLREAA---KSITKQIGGQAHEVAAKVDEYARGMISASGACLFEELGLY 242
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL + K+VKA+P G VLIH++TEK K P +
Sbjct: 243 YIGPVDGHNVEDLVAIFKKVKAMPSRGPVLIHIVTEKGKGYPPAEAAADKMHGVVKFDPK 302
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLN FQK FP RCFDVG
Sbjct: 303 TGKQFKTKFPTLSYTQYFAESLVKEAEVDDKIIAIHAAMGGGTGLNFFQKKFPDRCFDVG 362
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 363 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFALDRAGLVGAD 422
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNM+VM
Sbjct: 423 GPTHCGAFDVTYMACLPNMIVM 444
>gi|9971824|gb|AAG10432.1| 1-deoxy-D-xylulose-5-phosphate synthase [Tagetes erecta]
Length = 725
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 201/382 (52%), Positives = 237/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRTIRQT GL E+ HDAFG GHSSTSISAGL GMAVGRDLLGKNN
Sbjct: 165 MRTIRQTFGLAGFPKRDESNHDAFGAGHSSTSISAGL----------GMAVGRDLLGKNN 214
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVI+VI +GA A +YEA+NNAG L+++
Sbjct: 215 HVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIIVLNDNRQVSLPTATIDGPAPPVGALSRS 274
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L RL ++ +FRQL + A K+ ++ G + HE+ D+ + + G A FE+LGLY
Sbjct: 275 LTRLQTSQKFRQLREAA---KEVTKQLGDKTHEVAAKMDSLVKGMVGGQGASMFEELGLY 331
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
Y+GPVDGHNLEDL YV ++K++ PG VL+H++TEK K P +
Sbjct: 332 YVGPVDGHNLEDLVYVFDKIKSMTAPGPVLVHIVTEKGKGYPPAEVAADKMHGVVKFDTQ 391
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F L D++ MGGGTGLN FQK FP RCFDVG
Sbjct: 392 TGKQKKNKTKTLSYTQYFVDSLVAEAKEDDKIVAIHAAMGGGTGLNTFQKEFPARCFDVG 451
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHA+TFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 452 IAEQHAITFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 511
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFDTTFMACLPNMVVM
Sbjct: 512 GPTHCGAFDTTFMACLPNMVVM 533
>gi|51234083|gb|AAT97962.1| putative 1-deoxy-D-xylulose 5-phosphate synthase 2 [Solanum
habrochaites]
Length = 714
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 202/382 (52%), Positives = 236/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R+T GL E+ HDAFG GHSSTSISAGL GMAV RDLLG NN
Sbjct: 156 MHTMRKTSGLAPFPKRDESAHDAFGAGHSSTSISAGL----------GMAVARDLLGNNN 205
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NNAG L+ A
Sbjct: 206 HVISVIGDGAMTAGQAYEAMNNAGFLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSA 265
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L ++ +FRQL + A K ++ G Q HE+ D ++R + + S + FE+LGLY
Sbjct: 266 LSKLQASLKFRQLREAA---KTITKQIGPQAHEVAAKVDEYARGMLSASGSTLFEELGLY 322
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL +L++VK +P PG VLIH++TEK K LP +
Sbjct: 323 YIGPVDGHNIEDLITILEKVKEMPAPGPVLIHIVTEKGKGYLPAEAADDKMHGVAQFDPK 382
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L TR F + L DN+ MGGGTGLN FQK FP RCFDVG
Sbjct: 383 TGKQFKAKSPTLSYTRYFAESLIKEAENDNKIVAIHAAMGGGTGLNYFQKQFPERCFDVG 442
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 443 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 502
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 503 GPTHCGAFDVTYMACLPNMVVM 524
>gi|356523939|ref|XP_003530591.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Glycine max]
Length = 714
Score = 359 bits (922), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 201/382 (52%), Positives = 239/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR+T GL E+VHDAFGVGHSSTSISAGL GMAV RDLLGKNN
Sbjct: 156 MHTIRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGL----------GMAVARDLLGKNN 205
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+ISVI +GA A +YEA+NNAG L+ A
Sbjct: 206 SIISVIGDGALTAGQAYEAMNNAGFLDSNMIVVLNDNKQVSLPTATLDGPATPVGALSSA 265
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L ++ ++ +FR+L + A K ++ GGQ H++ D ++R + + S + FE+LGLY
Sbjct: 266 LSKIQASSEFRKLREAA---KTITKQIGGQTHQVAAKVDEYARGMISASGSTLFEELGLY 322
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL + ++VKA+P PG VLIHV+TEK K P +
Sbjct: 323 YIGPVDGHNIEDLVTIFEKVKAMPAPGPVLIHVVTEKGKGYPPAEKAADRMHGVVKFDPK 382
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L DN+ MGGGTGLN FQK FP RCFDVG
Sbjct: 383 TGHQLKAKSSTLSYTQYFAESLIKEAEIDNKIVAIHAAMGGGTGLNYFQKKFPERCFDVG 442
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 443 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFALDRAGLVGAD 502
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+M+CLPNMVVM
Sbjct: 503 GPTHCGAFDITYMSCLPNMVVM 524
>gi|87299429|dbj|BAE79547.1| 1-deoxyxylulose 5-phosphate synthase [Chrysanthemum x morifolium]
Length = 669
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 200/382 (52%), Positives = 238/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R+T GL E+VHDAFG GHSSTSISAGL GMAVGRDLLGKNN
Sbjct: 108 MNTMRKTSGLAGFPKRDESVHDAFGAGHSSTSISAGL----------GMAVGRDLLGKNN 157
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VISVI +GA A +YEA+NNAG L+
Sbjct: 158 NVISVIGDGAMTAGQAYEAMNNAGFLDSNLIVVLNDNKQVSLPTATLDGPATPVGALSST 217
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L ++P+FR+L + A K ++ G Q HE+ D ++R + + S + FE+LGLY
Sbjct: 218 LAKLQASPKFRKLREAA---KSITKQIGPQAHEVAAKVDEYARGMISASGSTLFEELGLY 274
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL + ++VK++P PG VLIH++TEK K P +
Sbjct: 275 YIGPVDGHNVEDLVTIFEKVKSMPAPGPVLIHIVTEKGKGHPPAEAAADRMHGVVKFDVG 334
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L DN+ MGGGTGLN FQK FP RCFDVG
Sbjct: 335 TGKQFKTKSPTLSYTQYFAEALIKEAEVDNKVVAIHAAMGGGTGLNYFQKKFPDRCFDVG 394
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 395 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 454
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 455 GPTHCGAFDVTYMACLPNMVVM 476
>gi|56785668|gb|AAW28999.1| 1-deoxy-D-xylulose-5-phosphate synthase [Antirrhinum majus]
Length = 733
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 200/382 (52%), Positives = 238/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R+T GL E+VHDAFG GHSSTSISAGL GMAV RDLLG NN
Sbjct: 173 MHTMRKTFGLAGFPKREESVHDAFGAGHSSTSISAGL----------GMAVARDLLGNNN 222
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-------------------------------KA 82
HVISVI +GA A +YEA+NNAG L+ KA
Sbjct: 223 HVISVIGDGAMTAGQAYEAMNNAGYLDSNLIIILNDNKQVSLPTATVDGPAPPVGALTKA 282
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L RL ++ +FRQL + A K+ ++ G + HE+ D+F R + AC FE+LG+Y
Sbjct: 283 LTRLQTSRKFRQLREVA---KELTKQIGTEAHEVAAKVDSFVRGVAGSPGACLFEELGIY 339
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGH++EDL ++ K++K +P PG V+IH+ITEK K P +
Sbjct: 340 YIGPVDGHSIEDLVFIFKKIKEMPAPGPVMIHIITEKGKGYPPAEVAADKMHGVVKFDPR 399
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLN+FQK FP R FDVG
Sbjct: 400 TGQQKKSKSETLSYTQYFAESLIAEAEQDDKVVAIHAAMGGGTGLNIFQKRFPGRTFDVG 459
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQVAHDVDLQKLPVRF +DRAGLVGAD
Sbjct: 460 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVAHDVDLQKLPVRFIMDRAGLVGAD 519
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFDTT+MACLPNMVVM
Sbjct: 520 GPTHCGAFDTTYMACLPNMVVM 541
>gi|10178920|emb|CAC08458.1| 1-D-desoxyxylulose 5-phosphate synthase (DXS) [Narcissus
pseudonarcissus]
Length = 709
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 200/382 (52%), Positives = 235/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+VHDAFG GHSSTSISAGL GMAV RDLLGK+N
Sbjct: 151 MHTLRQTSGLAGFPKRDESVHDAFGAGHSSTSISAGL----------GMAVARDLLGKSN 200
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK-------------------------------A 82
HVISVI +G A +YEA+NN G L+ A
Sbjct: 201 HVISVIGDGVMTAGQAYEAMNNVGYLDSNLIVVLNDNKQVSLPTATLNGPATPVGALSGA 260
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L ++ +FRQL + A K ++ GGQ HE+ D ++R + + S A FE+LGLY
Sbjct: 261 LAKLQASAKFRQLREAA---KCITKQIGGQAHEVAAKVDEYARGMISASGASLFEELGLY 317
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL + K+VKA+P PG VL+H++TEK K P +
Sbjct: 318 YIGPVDGHNVEDLVAIFKKVKAMPSPGPVLVHIVTEKGKGYPPAEAAADKMHGVVKFDPK 377
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D + MGGGTGLN FQK FP RCFDVG
Sbjct: 378 TGKQFKTKFPTLSYTQYFAESLVKEAEVDEKIVAIHAAMGGGTGLNFFQKKFPDRCFDVG 437
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 438 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFALDRAGLVGAD 497
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNM+VM
Sbjct: 498 GPTHCGAFDVTYMACLPNMIVM 519
>gi|255583239|ref|XP_002532384.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
gi|223527908|gb|EEF29996.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
Length = 714
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 199/382 (52%), Positives = 238/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R+T GL E+VHDAFG GHSSTSISAGL GMAV RDLLGKNN
Sbjct: 156 MHTMRKTSGLAGFPKRDESVHDAFGAGHSSTSISAGL----------GMAVARDLLGKNN 205
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NNAG L+ A
Sbjct: 206 HVISVIGDGAMTAGQAYEAMNNAGYLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSA 265
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L ++ ++ +FR+L + A K ++ GGQ H++ D ++R + + S + FE+LGLY
Sbjct: 266 LTKIQASTKFRKLREAA---KSITKQIGGQTHQVAAKVDEYARGMISASGSTLFEELGLY 322
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGH++EDL + ++VKA+P PG VLIH++TEK K P +
Sbjct: 323 YIGPVDGHSIEDLVTIFQKVKAMPAPGPVLIHIVTEKGKGYPPAEAAADKMHGVVKFDVE 382
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L DN+ MGGGTGLN FQK FP RCFDVG
Sbjct: 383 TGKQFKQKSSTLSYTQYFAEALIKEAEVDNKIVAIHAAMGGGTGLNYFQKRFPDRCFDVG 442
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 443 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 502
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 503 GPTHCGAFDITYMACLPNMVVM 524
>gi|374639395|gb|AEZ55686.1| putative 1-deoxy-D-xylulose 5-phosphate synthase of [Salvia
miltiorrhiza]
Length = 713
Score = 357 bits (915), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 199/382 (52%), Positives = 238/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+VHDAFGVGHSSTSISAGL GMAV RDLLGK+N
Sbjct: 155 MHTIRQTSGLAGFPKRDESVHDAFGVGHSSTSISAGL----------GMAVARDLLGKDN 204
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
V+SVI +GA A +YEA+NNAG L+ A
Sbjct: 205 SVVSVIGDGAMTAGQAYEAMNNAGFLDSNLIIVLNDNKQVSLPTATLDGPATPVGALSSA 264
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L ++P+FRQL + A K ++ G Q HE+ D ++R + + S + FFE+LGLY
Sbjct: 265 LTKLQASPKFRQLREAA---KSITKQIGPQAHEVAAKVDEYARGMLSASGSTFFEELGLY 321
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN++DL + ++VK++P PG VLIH++TEK K P +
Sbjct: 322 YIGPVDGHNIDDLVTIFQKVKSMPAPGPVLIHIVTEKGKGYPPAEAAADRMHGVVKFDPC 381
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLN FQK FP RCFDVG
Sbjct: 382 TGKQNKAKSSTLSYTQYFAESLIREAEADSKIVAIHAAMGGGTGLNYFQKRFPDRCFDVG 441
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFC IYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 442 IAEQHAVTFAAGLATEGLKPFCTIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 501
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCG+FD T+MACLPNMVVM
Sbjct: 502 GPTHCGSFDVTYMACLPNMVVM 523
>gi|449432964|ref|XP_004134268.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2,
chloroplastic-like [Cucumis sativus]
Length = 721
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 199/382 (52%), Positives = 238/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E++HDAFG GHSSTSISAGL GMAVGRDLLGK N
Sbjct: 153 MHTLRQTSGLAGFPKRDESIHDAFGAGHSSTSISAGL----------GMAVGRDLLGKKN 202
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
VISVI +GA A +YEA+NNAG L+ A
Sbjct: 203 SVISVIGDGAMTAGQAYEAMNNAGYLDTNMIVILNDNKQVSLPTATLDGPATPVGALSSA 262
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH----EIDAFSREIEAGSRACFFEDLGLY 138
L +L ++ QFR+L + A K ++ G Q H ++D ++R + +GS + FFE+LGLY
Sbjct: 263 LTKLQASTQFRKLREAA---KTITKQIGKQTHGVAAKVDEYARGMISGSGSTFFEELGLY 319
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+ DL +L++VK++P PG VLIH++TEK K P +
Sbjct: 320 YIGPVDGHNVGDLVTILEKVKSMPAPGPVLIHILTEKGKGYPPAEAAADKMHGVVKFDPK 379
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLN FQK FP RCFDVG
Sbjct: 380 TGKQFKTKSPTLSYTQYFAESLIKEAELDDKIVAIHAAMGGGTGLNYFQKKFPQRCFDVG 439
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EG+KPFCAIYSSFLQR FDQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 440 IAEQHAVTFAAGLATEGIKPFCAIYSSFLQRGFDQVVHDVDLQKLPVRFAMDRAGLVGAD 499
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNM+VM
Sbjct: 500 GPTHCGAFDITYMACLPNMIVM 521
>gi|242043226|ref|XP_002459484.1| hypothetical protein SORBIDRAFT_02g005380 [Sorghum bicolor]
gi|241922861|gb|EER96005.1| hypothetical protein SORBIDRAFT_02g005380 [Sorghum bicolor]
Length = 730
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/382 (51%), Positives = 237/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ HDAFGVGHSSTSISA L GMAV RDLLG+ N
Sbjct: 172 MHTIRQTSGLAGFPKRDESAHDAFGVGHSSTSISAAL----------GMAVARDLLGRKN 221
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HV+SVI +GA A +YEA+NN+G L++A
Sbjct: 222 HVVSVIGDGAMTAGQAYEAMNNSGFLDANMIVVLNDNKQVSLPTATLDGPSKPVGALSRA 281
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L S+ +FR+L + A K ++ GG HE+ D ++R + + S + FE+LGLY
Sbjct: 282 LTKLQSSTKFRRLREAA---KSVTKQIGGPTHEVAAKVDEYARGMMSASGSSLFEELGLY 338
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGH++EDL + ++VK++P PG VLIHV+TEK K P +
Sbjct: 339 YIGPVDGHSVEDLVTIFEKVKSMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFEPS 398
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLN FQK FP RCFDVG
Sbjct: 399 TGKQLKSKSSTLSYTQYFAESLIREADADDKVVAIHAAMGGGTGLNYFQKRFPERCFDVG 458
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR +DQV HDVDLQ+LPVRFA+DRAGLVGAD
Sbjct: 459 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFALDRAGLVGAD 518
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 519 GPTHCGAFDVTYMACLPNMVVM 540
>gi|449532138|ref|XP_004173040.1| PREDICTED: LOW QUALITY PROTEIN: probable
1-deoxy-D-xylulose-5-phosphate synthase 2,
chloroplastic-like, partial [Cucumis sativus]
Length = 694
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/382 (52%), Positives = 238/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E++HDAFG GHSSTSISAGL GMAVGRDLLGK N
Sbjct: 153 MHTLRQTSGLAGFPKRDESIHDAFGAGHSSTSISAGL----------GMAVGRDLLGKKN 202
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
VISVI +GA A +YEA+NNAG L+ A
Sbjct: 203 SVISVIGDGAMTAGQAYEAMNNAGYLDTNMIVILNDNKQVSLPTATLDGPATPVGALSSA 262
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH----EIDAFSREIEAGSRACFFEDLGLY 138
L +L ++ QFR+L + A K ++ G Q H ++D ++R + +GS + FFE+LGLY
Sbjct: 263 LTKLQASTQFRKLREAA---KTITKQIGKQTHGVAAKVDEYARGMISGSGSTFFEELGLY 319
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+ DL +L++VK++P PG VLIH++TEK K P +
Sbjct: 320 YIGPVDGHNVGDLVTILEKVKSMPAPGPVLIHILTEKGKGYPPAEAAADKMHGVVKFDPK 379
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLN FQK FP RCFDVG
Sbjct: 380 TGKQFKTKSPTLSYTQYFAESLIKEAELDDKIVAIHAAMGGGTGLNYFQKKFPQRCFDVG 439
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EG+KPFCAIYSSFLQR FDQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 440 IAEQHAVTFAAGLATEGIKPFCAIYSSFLQRGFDQVVHDVDLQKLPVRFAMDRAGLVGAD 499
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNM+VM
Sbjct: 500 GPTHCGAFDITYMACLPNMIVM 521
>gi|11691594|emb|CAA09804.2| 1-deoxyxylulose 5-phosphate synthase [Catharanthus roseus]
Length = 716
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/382 (51%), Positives = 237/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+++DAFG GHSSTSISAGL GMAV RD+LGKNN
Sbjct: 158 MHTIRQTSGLAGFPKRDESIYDAFGAGHSSTSISAGL----------GMAVARDILGKNN 207
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VISVI +GA A +YEA+NNAG L+ A
Sbjct: 208 NVISVIGDGAMTAGQAYEAMNNAGFLDANLIVVLNDNKQVSLPTATLDGPATPVGALSSA 267
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L ++P+FRQL + A K ++ G Q HE+ D ++R + + + + FE+LGLY
Sbjct: 268 LSKLQASPKFRQLREAA---KSITKQIGPQAHEVAAKVDEYARGMLSATGSTLFEELGLY 324
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGH++EDL + ++VKA+P PG VLIH++TEK K P +
Sbjct: 325 YIGPVDGHSIEDLVTIFQKVKAMPAPGPVLIHIVTEKGKGYPPAEVAADKMHGVVKFDPK 384
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L DN+ MGGGTGLN FQK FP RCFDVG
Sbjct: 385 TGKQFKSKSPTLSYTQYFAESLIKEAEIDNKIIAIHAAMGGGTGLNYFQKRFPDRCFDVG 444
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 445 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 504
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD +MACLPNM+VM
Sbjct: 505 GPTHCGAFDVAYMACLPNMIVM 526
>gi|356564868|ref|XP_003550669.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Glycine max]
Length = 728
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 202/382 (52%), Positives = 237/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E++HDAFGVGHSSTSISA L GMAV RDL+GK+N
Sbjct: 166 MHTIRQTGGLAGFPKRDESLHDAFGVGHSSTSISASL----------GMAVARDLIGKDN 215
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA +YEA+NNAG L++A
Sbjct: 216 HVISVIGDGAMTGGQAYEAMNNAGFLDTNLIIILNDNEQVSLPTATIDGPAPPVGALSRA 275
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL+++ +F QL A K ++ G + +E +D++ R + G+ AC FE+LGL+
Sbjct: 276 LARLNTSSKFHQLRDLA---KGITKQIGSRAYEFTSKLDSYLRGMVGGAGACLFEELGLF 332
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL-------------- 184
YIGPVDGH++EDL ++LK VK +P G VLIHVITEK K P ++
Sbjct: 333 YIGPVDGHDIEDLVHILKSVKGMPTLGPVLIHVITEKGKGYHPAEVAPDKMHGVVKFDPK 392
Query: 185 ------------QQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
T+ F + L MGGGTGLNLFQK FP RCFDVG
Sbjct: 393 SGKQLKSKASTRSYTQYFAESLTAEAEVDEKIVAIHAAMGGGTGLNLFQKRFPERCFDVG 452
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR +DQVAHDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 453 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVAHDVDLQKLPVRFALDRAGLVGAD 512
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFDTTFMACLPNMVVM
Sbjct: 513 GPTHCGAFDTTFMACLPNMVVM 534
>gi|16930804|gb|AAL32062.1|AF443590_1 deoxy-D-xylulose-5-phosphate synthase [Morinda citrifolia]
Length = 722
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 200/382 (52%), Positives = 237/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+TIRQT G+ E+V+DAFG GHSSTSISAGL GMAVGRDLLGKNN
Sbjct: 164 MQTIRQTYGIAGFPKRDESVYDAFGAGHSSTSISAGL----------GMAVGRDLLGKNN 213
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VISVI +GA A +YEA+NNAG L+ A
Sbjct: 214 NVISVIGDGAMTAGQAYEAMNNAGFLDANLIVILNDNKQVSLPTGTLDGPATPVGALSSA 273
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L ++P+FRQL + A K ++ G Q HE+ D ++R + + S + FFE+LGLY
Sbjct: 274 LTKLQASPKFRQLREAA---KSITKQIGPQAHEVAAKVDEYARGLISASGSTFFEELGLY 330
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL + +VK +P PG VLIH++TEK K P +
Sbjct: 331 YIGPVDGHNIEDLITIFDKVKTMPAPGPVLIHIVTEKGKGYPPAEAAADRMHGVVKFDVA 390
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L DN+ MGGGTGLN FQK FP RCFDVG
Sbjct: 391 SGKQFKSKSPTLSYTQYFAEALIKEAEIDNKIVAIHAAMGGGTGLNYFQKIFPERCFDVG 450
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 451 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 510
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD +MACL NM+VM
Sbjct: 511 GPTHCGAFDVAYMACLSNMIVM 532
>gi|117553508|gb|ABK35283.1| deoxyxylulose-5-phosphate synthase [Adonis aestivalis var.
palaestina]
Length = 717
Score = 353 bits (907), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 198/382 (51%), Positives = 235/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ HDAFG GHSSTSISAGL GMAVGRDLLGK+N
Sbjct: 155 MHTIRQTSGLAGFPKRDESDHDAFGAGHSSTSISAGL----------GMAVGRDLLGKSN 204
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NNAG L+ A
Sbjct: 205 HVISVIGDGAMTAGQAYEAMNNAGFLDSNLIVVLNDNKQVSLPTATLDGPATPVGALSSA 264
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L ++ +FR+L + A K ++ GGQ EI D ++R + + + FE+LGLY
Sbjct: 265 LSKLQASSKFRKLREAA---KKVTKQIGGQTQEIAAKVDEYARGMMSAQGSTLFEELGLY 321
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL + ++VKA+P PG VL+H++TEK K P +
Sbjct: 322 YIGPVDGHNVEDLVTIFEKVKALPAPGPVLVHIVTEKGKGYPPAEAAADRMHGVVKFDPE 381
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLN FQK FP R FDVG
Sbjct: 382 TGKQFKSKAPTLSYTQYFAEALIKEAEVDSKIVAIHAAMGGGTGLNFFQKKFPERTFDVG 441
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 442 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAVDRAGLVGAD 501
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNM+VM
Sbjct: 502 GPTHCGAFDITYMACLPNMIVM 523
>gi|21322715|emb|CAD22531.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Medicago truncatula]
gi|154815950|emb|CAN89180.1| 1-Deoxy-D-xylulose 5-phosphate synthase 2 precursor [Medicago
truncatula]
Length = 711
Score = 353 bits (907), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 198/382 (51%), Positives = 238/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR+T GL E+VHDAFGVGHSSTSISAGL GMAV RDLLGK N
Sbjct: 153 MHTIRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGL----------GMAVARDLLGKKN 202
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
VISVI +GA A +YEA+NNAG L+
Sbjct: 203 SVISVIGDGAMTAGQAYEAMNNAGFIDSNLIVILNDNKQVSLPTATLDGPATPVGALSST 262
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH----EIDAFSREIEAGSRACFFEDLGLY 138
L ++ ++ +FR+L + ++K+ ++ GGQ H ++D ++R+ +GS + FE+LG+Y
Sbjct: 263 LSKIQASRKFRKLRE---ATKNITKQIGGQTHLVASKVDKYARDFISGSGSSLFEELGMY 319
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPL---------------- 182
YIGP+DGHN+EDL + ++VKA+P PG VLIH++TEK K P
Sbjct: 320 YIGPMDGHNIEDLVNIFEKVKAMPAPGPVLIHIVTEKGKGYPPALAAADRMHGVVKFDPK 379
Query: 183 ----------KLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F L DN+ MGGGTGLN FQK FP RCFDVG
Sbjct: 380 TGHQFKPKPSTLAYTQYFADSLIKEAEMDNKIVAIHAAMGGGTGLNYFQKRFPDRCFDVG 439
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 440 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 499
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNM+VM
Sbjct: 500 GPTHCGAFDITFMACLPNMIVM 521
>gi|224071349|ref|XP_002303416.1| predicted protein [Populus trichocarpa]
gi|222840848|gb|EEE78395.1| predicted protein [Populus trichocarpa]
Length = 692
Score = 353 bits (906), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 199/382 (52%), Positives = 235/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR+T GL E+V+DAFG GHSSTSISAGL GMAV RDLLGK+N
Sbjct: 133 MHTIRKTSGLAGFPKRDESVYDAFGAGHSSTSISAGL----------GMAVARDLLGKSN 182
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NNAG L+
Sbjct: 183 HVISVIGDGAMTAGQAYEAMNNAGFLDSNLIVILNDNKQVSLPTATLDGPATPVGALSST 242
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L ++ +FR+L + A K ++ GQ H++ D ++R + + S + FE+LGLY
Sbjct: 243 LTKLQASAKFRKLHEAA---KGITKQIDGQTHQVAAKVDEYARGMISASGSTLFEELGLY 299
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGH++EDL + + VKA+P PG VLIH+ITEK K P +
Sbjct: 300 YIGPVDGHSIEDLVTIFQNVKAMPAPGPVLIHIITEKGKGYPPAEAAADKMHGVVKFDVK 359
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L TR F + L DN+ MGGGTGLN FQK FP RCFDVG
Sbjct: 360 SGQQFKLKSSTLSYTRYFAESLIKEAEVDNKIVAIHAAMGGGTGLNYFQKRFPDRCFDVG 419
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 420 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 479
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 480 GPTHCGAFDITYMACLPNMVVM 501
>gi|229463110|gb|ACQ66107.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Salvia miltiorrhiza]
Length = 724
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 201/382 (52%), Positives = 231/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ HDAFG GHSSTSISAGL GMAVGRDLL KNN
Sbjct: 164 MHTIRQTFGLAGFPKRDESAHDAFGAGHSSTSISAGL----------GMAVGRDLLHKNN 213
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NNAG L+KA
Sbjct: 214 HVISVIGDGAMTAGQAYEALNNAGFLDSNLIIVLNDNKQVSLPTATIDGPAPPVGALSKA 273
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L RL ++ +FRQL + A K ++ G Q HEI D + + + A FE+LG+Y
Sbjct: 274 LTRLQASRKFRQLREAA---KGMTRQMGEQAHEIASKVDTYMKGMMGKPGASLFEELGIY 330
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL-------------- 184
YIGPVDGHN+ED Y+ K+VK +P PG VLIH+ITEK K P ++
Sbjct: 331 YIGPVDGHNVEDPVYIFKKVKEMPAPGPVLIHIITEKGKGYSPAEVAADKMHGVVKFDPT 390
Query: 185 ------------QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
T+ F + L D+R MGGGTGLN FQK FP RCFDVG
Sbjct: 391 TGKQLKSKTNTKSYTQYFAESLVAEAEHDDRIVAIHAAMGGGTGLNYFQKRFPDRCFDVG 450
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFC IYSSFLQR +DQV HDVDLQKLPVRF +DRAG+VGAD
Sbjct: 451 IAEQHAVTFAAGLATEGLKPFCTIYSSFLQRGYDQVVHDVDLQKLPVRFMMDRAGVVGAD 510
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFDTT+MACLPNM VM
Sbjct: 511 GPTHCGAFDTTYMACLPNMFVM 532
>gi|356523941|ref|XP_003530592.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Glycine max]
Length = 714
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 198/382 (51%), Positives = 236/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR++ GL E+VHDAFGVGHSSTSISAGL GMAV RDLLGKNN
Sbjct: 156 MHTIRKSSGLAGFPKRDESVHDAFGVGHSSTSISAGL----------GMAVARDLLGKNN 205
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+ISVI +GA A +YEA+NNAG L+ A
Sbjct: 206 SIISVIGDGALTAGQAYEAMNNAGFLDSNMIVVLNDNKQVSLPTATLDGPATPVGALSSA 265
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L ++ ++ +FR+L + A K ++ GGQ H++ D ++R + + S + FE+LGLY
Sbjct: 266 LSKIQASSEFRKLREAA---KTITKQIGGQTHQVAAKVDEYARGMISASGSTLFEELGLY 322
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL + ++VKA+P PG VLIHV+TEK K P +
Sbjct: 323 YIGPVDGHNIEDLVTIFEKVKAMPAPGPVLIHVVTEKGKGYPPAEKAADRMHGVVKFDPK 382
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D + MGGGTGLN F K FP RCFDVG
Sbjct: 383 TGQQFKAKTSTLSYTQYFAESLIKEAENDKKIVAIHAAMGGGTGLNYFHKRFPKRCFDVG 442
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 443 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 502
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD +MACLPNMVVM
Sbjct: 503 GPTHCGAFDIAYMACLPNMVVM 524
>gi|94421690|gb|ABF18929.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea
brasiliensis]
Length = 711
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 198/382 (51%), Positives = 237/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR+T GL E+V+DAFG GHSSTSISAGL GMAV RDLLGKNN
Sbjct: 153 MHTIRKTSGLAGFPKRDESVYDAFGAGHSSTSISAGL----------GMAVARDLLGKNN 202
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VISVI +GA A +YEA+NNAG L+ A
Sbjct: 203 NVISVIGDGAMTAGQAYEAMNNAGFLDANLIVILNDNKQVSLPTATLDGPATPVGALSSA 262
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L ++ ++ QFR+L + A K ++ GG+ H++ D ++R + + S + FE+LGLY
Sbjct: 263 LAKIQASTQFRKLREAA---KSITKQIGGKTHQVAAKVDEYARGMISASGSTLFEELGLY 319
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL + ++VKA+P PG VLIH++TEK K P +
Sbjct: 320 YIGPVDGHNIEDLVTIFQKVKAMPAPGPVLIHIVTEKGKGYPPAEAAADKMHGVVKFDVQ 379
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L DN+ MGGGTGLN FQK FP RCFDVG
Sbjct: 380 TGKQFKPKSPTLSYTQYFAEALIKEAETDNKIVAIHAAMGGGTGLNYFQKRFPDRCFDVG 439
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 440 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 499
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD +MACLPNMVVM
Sbjct: 500 GPTHCGAFDIAYMACLPNMVVM 521
>gi|356567757|ref|XP_003552082.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Glycine max]
Length = 714
Score = 353 bits (905), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 199/382 (52%), Positives = 235/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR+T GL E++HDAFGVGHSSTSISAGL GMAV RDLLGKNN
Sbjct: 156 MHTIRKTSGLAGFPKRDESIHDAFGVGHSSTSISAGL----------GMAVARDLLGKNN 205
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+ISVI +GA A +YEA+NNAG L+ A
Sbjct: 206 SIISVIGDGALTAGQAYEAMNNAGFLDSNMIVVLNDNKQVSLPTATLDGPASPVGALSSA 265
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L ++ ++ +FR+L + A K ++ G Q H++ D ++R I +GS FFE+LGLY
Sbjct: 266 LSKIQASAEFRKLREAA---KSITKQIGKQTHQVAAKVDEYARGIISGSACTFFEELGLY 322
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGH +EDL + ++VKA+P PG VLIH +TEK K P +
Sbjct: 323 YIGPVDGHKIEDLVTIFEKVKAMPAPGPVLIHCVTEKGKGYPPAEKASDKMHGVVKFDPK 382
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D + MGGGTGLN F K FP RCFDVG
Sbjct: 383 TGEQFKAKSSTLSYTQYFAESLIKEAENDKKIVAIHAAMGGGTGLNYFHKRFPERCFDVG 442
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 443 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFALDRAGLVGAD 502
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 503 GPTHCGAFDITYMACLPNMVVM 524
>gi|3114573|gb|AAC33513.1| 1-deoxyxylulose-5-phosphate synthase [Mentha x piperita]
Length = 724
Score = 353 bits (905), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 199/382 (52%), Positives = 234/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ HDAFG GHSSTSISAGL GMAV RDLL KNN
Sbjct: 163 MHTIRQTFGLAGFPKRDESAHDAFGAGHSSTSISAGL----------GMAVARDLLQKNN 212
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NNAG L+KA
Sbjct: 213 HVISVIGDGAMTAGQAYEALNNAGFLDSNLIIVLNDNKQVSLPTATVDGPAPPVGALSKA 272
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEIDA----FSREIEAGSRACFFEDLGLY 138
L +L ++ +FRQL + A K ++ G HEI + + + + A FE+LG+Y
Sbjct: 273 LTKLQASRKFRQLREAA---KSMTKQMGAPAHEIASKLTQYVKGMMGKPGASLFEELGIY 329
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL-------------- 184
YIGPVDGHN+EDL Y+ K+VK +P PG VLIH+ITEK K P ++
Sbjct: 330 YIGPVDGHNVEDLVYIFKKVKEMPAPGPVLIHIITEKGKGYPPAEIAADKMHGVVKFDAK 389
Query: 185 ------------QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
T+ F + L D++ MGGGTGLN+FQK FP RCFDVG
Sbjct: 390 TGKQMKTKNKTKSYTQYFAESLVAEAEHDDKIVAIHAAMGGGTGLNIFQKQFPDRCFDVG 449
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAG+AAEGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRF +DRAG+VGAD
Sbjct: 450 IAEQHAVTFAAGMAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFMMDRAGVVGAD 509
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFDTT+MACLPNMVVM
Sbjct: 510 GPTHCGAFDTTYMACLPNMVVM 531
>gi|225469658|ref|XP_002266925.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic [Vitis vinifera]
gi|296090521|emb|CBI40852.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 199/382 (52%), Positives = 237/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR+T GL E+VHDAFGVGHSSTSISAGL GMAVGRDLLGK N
Sbjct: 156 MHTIRKTSGLAGFPKREESVHDAFGVGHSSTSISAGL----------GMAVGRDLLGKTN 205
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
V++VI +GA A +YEA+NNAG L++
Sbjct: 206 SVVAVIGDGAMTAGQAYEAMNNAGYLDTNMIIILNDNKQVSLPTATLDGPAIPVGALSRT 265
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L S+ +FR+L + A K ++ GGQ E+ D ++R + + S + FE+LGLY
Sbjct: 266 LTKLQSSTKFRKLREAA---KSITKQLGGQTFEVAAKVDEYARGLLSASGSTLFEELGLY 322
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN++DL + ++VKA+P PG VLIH++TEK K P +
Sbjct: 323 YIGPVDGHNVDDLVGIFQKVKAMPAPGPVLIHIVTEKGKGYPPAEAAADRMHGVVKFDPK 382
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L TR F + L D++ MGGGTGLN FQK FP RCFDVG
Sbjct: 383 SGQQFKSKSPTLPYTRYFAESLIGEAKVDDKIVAIHAAMGGGTGLNYFQKRFPDRCFDVG 442
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 443 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVIHDVDLQKLPVRFAMDRAGLVGAD 502
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 503 GPTHCGAFDITYMACLPNMVVM 524
>gi|326501314|dbj|BAJ98888.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 714
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 197/382 (51%), Positives = 236/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR+T GL E+ HDAFGVGHSSTSISA L GMAV RDL GK N
Sbjct: 156 MHTIRKTSGLAGFPKRDESAHDAFGVGHSSTSISAAL----------GMAVARDLQGKKN 205
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NN+G L+KA
Sbjct: 206 HVISVIGDGAMTAGQAYEAMNNSGFLDSNMIVVLNDNKQVSLPTATLDGPSKPVGALSKA 265
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L S+ +FR+L + A K ++ GG HE+ D ++R + + S + FE+LGLY
Sbjct: 266 LTKLQSSTKFRRLREAA---KTITKQIGGSTHEVAAKVDEYARGMISASGSTLFEELGLY 322
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGH+LEDL + ++VK++P PG VLIH++TEK K P +
Sbjct: 323 YIGPVDGHSLEDLVTIFEKVKSMPAPGPVLIHIVTEKGKGYPPAEAAADKMHGVVKFDPT 382
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLN FQK FP RCFDVG
Sbjct: 383 TGKQFKTKSPTLSYTQYFAESLIREAEGDDKVVAIHAAMGGGTGLNYFQKRFPERCFDVG 442
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLAAEG+KPFCAIYSSFLQR +DQV HDVDLQ+LPVRFA+DRAGLVGAD
Sbjct: 443 IAEQHAVTFAAGLAAEGMKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFALDRAGLVGAD 502
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 503 GPTHCGAFDVTYMACLPNMVVM 524
>gi|164604986|dbj|BAF98289.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
Length = 711
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 197/382 (51%), Positives = 237/382 (62%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR+T GL E+V+DAFG GHSSTSISAGL GMAV RDLLGKNN
Sbjct: 153 MHTIRKTSGLAGFPKRDESVYDAFGAGHSSTSISAGL----------GMAVARDLLGKNN 202
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VISVI +GA A ++EA+NNAG L+ A
Sbjct: 203 NVISVIGDGAMTAGQAHEAMNNAGFLDANLIVILNDNKQVSLPTATLDGPATPVGALSSA 262
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L ++ ++ QFR+L + A K ++ GG+ H++ D ++R + + S + FE+LGLY
Sbjct: 263 LAKIQASTQFRKLREAA---KSITKQIGGKTHQVAAKVDEYARGMISASGSTLFEELGLY 319
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL + ++VKA+P PG VLIH++TEK K P +
Sbjct: 320 YIGPVDGHNIEDLVTIFQKVKAMPAPGPVLIHIVTEKGKGYPPAEAAADKMHGVVKFDVQ 379
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L DN+ MGGGTGLN FQK FP RCFDVG
Sbjct: 380 TGKQFKPKSPTLSYTQYFAEALIKEAETDNKIVAIHAAMGGGTGLNYFQKRFPDRCFDVG 439
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 440 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 499
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD +MACLPNMVVM
Sbjct: 500 GPTHCGAFDIAYMACLPNMVVM 521
>gi|209360747|gb|ACI43010.1| 1-deoxy-D-xylulose 5-phosphate synthase [Stevia rebaudiana]
Length = 715
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 199/382 (52%), Positives = 235/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR+T GL E+ HDAFG GHSSTSISAGL GMAVGRDLLGK N
Sbjct: 154 MHTIRKTSGLAGFPKRDESAHDAFGAGHSSTSISAGL----------GMAVGRDLLGKTN 203
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK-------------------------------A 82
+VISVI +GA A +YEAINNAG L+ A
Sbjct: 204 NVISVIGDGAMTAGRAYEAINNAGFLDSNLIVVLNDNKQVSLPTATLDGPATPVGALSGA 263
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L ++ +FR+L + A K ++ G Q HE+ D ++R + + S + FE+LGLY
Sbjct: 264 LSKLQASTKFRKLREAA---KSITKQIGPQAHEVAAKVDEYARGMISASGSTLFEELGLY 320
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL + ++VK++P PG VLIH++TEK K P +
Sbjct: 321 YIGPVDGHNVEDLVNIFEKVKSMPAPGPVLIHIVTEKGKGYPPAEAAADRMHGVVKFDVP 380
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L DN+ MGGGTGLN FQK P RCFDVG
Sbjct: 381 TGKQFKTKSPTLSYTQYFAESLIKEAEADNKIVAIHAAMGGGTGLNYFQKKCPERCFDVG 440
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 441 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 500
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 501 GPTHCGAFDITYMACLPNMVVM 522
>gi|153799538|gb|ABS50520.1| 1-deoxy-D-xylulose 5-phosphate synthase type II [Picea abies]
Length = 746
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 199/382 (52%), Positives = 235/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ HDAFGVGHSSTSISA +GMAVGRDLLGK+N
Sbjct: 180 MGTMRQTSGLAGFPRRVESEHDAFGVGHSSTSISAA----------IGMAVGRDLLGKHN 229
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVI+VI +GA A +YEA+NNAG L+ A
Sbjct: 230 HVIAVIGDGAMTAGQAYEALNNAGFLDSNMIIILNDNKQVSLPTATIDGPAPPVGALSSA 289
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL ++ +FRQL + A KD + GG H+ +D ++R + + + FE+LGLY
Sbjct: 290 LCRLQASKKFRQLREVA---KDITHQIGGATHQLAAKVDDYARGMFSAPGSALFEELGLY 346
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN++DL +L+ VK++P PG VLIHV+TEK K P +
Sbjct: 347 YIGPVDGHNIQDLVAILENVKSMPTPGPVLIHVVTEKGKGYPPAEKAADKLHGVVKFDPA 406
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D + MGGGTGLN FQK FP RCFDVG
Sbjct: 407 TGKQFKPKSSTLSYTQYFAEGLMAEAERDEKIVAIHAAMGGGTGLNYFQKRFPERCFDVG 466
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 467 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFALDRAGLVGAD 526
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 527 GPTHCGAFDVTYMACLPNMVVM 548
>gi|22797427|emb|CAD22155.2| 1-deoxy-D-xylulose 5-phosphate synthase [Stevia rebaudiana]
Length = 715
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 199/382 (52%), Positives = 235/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR+T GL E+ HDAFG GHSSTSISAGL GMAVGRDLLGK N
Sbjct: 154 MHTIRKTSGLAGFPKRDESAHDAFGAGHSSTSISAGL----------GMAVGRDLLGKTN 203
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK-------------------------------A 82
+VISVI +GA A +YEAINNAG L+ A
Sbjct: 204 NVISVIGDGAMTAGRAYEAINNAGFLDSNLIVVLNDNKQVSLPTATLDGPATPVGALSGA 263
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L ++ +FR+L + A K ++ G Q HE+ D ++R + + S + FE+LGLY
Sbjct: 264 LSKLQASTKFRKLREAA---KSITKQIGPQAHEVAAKVDEYARGMISASGSTLFEELGLY 320
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL + ++VK++P PG VLIH++TEK K P +
Sbjct: 321 YIGPVDGHNVEDLVNIFEKVKSMPAPGPVLIHIVTEKGKGYPPAEAAADRMHGVVKFDVP 380
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L DN+ MGGGTGLN FQK P RCFDVG
Sbjct: 381 TGKQFKTKSPTLSYTQYFAESLIKEAEADNKIVAIHAAMGGGTGLNYFQKKCPERCFDVG 440
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 441 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 500
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 501 GPTHCGAFDITYMACLPNMVVM 522
>gi|414883878|tpg|DAA59892.1| TPA: 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
Length = 727
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 196/382 (51%), Positives = 234/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ HDAFGVGHSSTSISA L GMAV RDLLG+ N
Sbjct: 168 MHTIRQTSGLAGFPKRDESAHDAFGVGHSSTSISAAL----------GMAVARDLLGRKN 217
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NN+G L++A
Sbjct: 218 HVISVIGDGAMTAGQAYEAMNNSGYLDANMIVVLNDNKQVSLPTATLDGPSKPVGALSRA 277
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L S+ +FR+L + A K ++ GG HE+ D ++R + + S + FE+LGLY
Sbjct: 278 LTKLQSSTKFRRLREAA---KSVTKQIGGPTHEVAAKVDEYARGMISASGSSLFEELGLY 334
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGH +EDL + ++VK++P PG VLIH++TEK K P +
Sbjct: 335 YIGPVDGHCVEDLVTIFEKVKSMPAPGPVLIHIVTEKGKGYPPAEAAADRMHGVVKFEPA 394
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D + MGGGTGLN FQK FP RCFDVG
Sbjct: 395 TGRQLKSKSPTLSYTQYFAESLIREAESDEKVVAIHAAMGGGTGLNYFQKRFPERCFDVG 454
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR +DQV HDVDLQ+LPVRFA+DRAGLVGAD
Sbjct: 455 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFALDRAGLVGAD 514
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD +MACLPNMVVM
Sbjct: 515 GPTHCGAFDVAYMACLPNMVVM 536
>gi|408833346|gb|AFU93069.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Eucommia
ulmoides]
Length = 713
Score = 349 bits (896), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 196/382 (51%), Positives = 235/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR+T GL E+ +DAFG GHSSTSISAGL GMA+ RDLLGKNN
Sbjct: 155 MHTIRKTSGLAGFPKRDESTYDAFGAGHSSTSISAGL----------GMAIARDLLGKNN 204
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VISVI +GA A +YEA+NNAG L+ A
Sbjct: 205 NVISVIGDGAMTAGQAYEALNNAGFLDSNLIVVLNDNKQVSLPTATIDGPATPVGALSSA 264
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L ++P+FRQL + A K ++ G Q HE+ D ++R + + + + FE+LGLY
Sbjct: 265 LSKLQASPKFRQLREAA---KTITKQIGPQAHEVAAKVDEYARGMFSATGSTLFEELGLY 321
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL + ++VK +P PG VLIH++TEK K P +
Sbjct: 322 YIGPVDGHNIEDLVTIFQKVKEMPAPGPVLIHIVTEKGKGYPPAESAPDKMHGVVKFDPA 381
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLN FQK FP RCFDVG
Sbjct: 382 TGKQFKVKAPTLSYTQYFAESLIKEAEADSKIVAIHAAMGGGTGLNYFQKRFPDRCFDVG 441
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 442 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 501
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD +MACLPNMVVM
Sbjct: 502 GPTHCGAFDIAYMACLPNMVVM 523
>gi|145652154|gb|ABP88135.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
Length = 705
Score = 349 bits (896), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 196/382 (51%), Positives = 234/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ HDAFGVGHSSTSISA L GMAV RDLLG+ N
Sbjct: 146 MHTIRQTSGLAGFPKRDESAHDAFGVGHSSTSISAAL----------GMAVARDLLGRKN 195
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NN+G L++A
Sbjct: 196 HVISVIGDGAMTAGQAYEAMNNSGYLDANMIVVLNDNKQVSLPTATLDGPSKPVGALSRA 255
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L S+ +FR+L + A K ++ GG HE+ D ++R + + S + FE+LGLY
Sbjct: 256 LTKLQSSTKFRRLREAA---KSVTKQIGGPTHEVAAKVDEYARGMISASGSSLFEELGLY 312
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGH +EDL + ++VK++P PG VLIH++TEK K P +
Sbjct: 313 YIGPVDGHCVEDLVTIFEKVKSMPAPGPVLIHIVTEKGKGYPPAEAAADRMHGVVKFEPA 372
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D + MGGGTGLN FQK FP RCFDVG
Sbjct: 373 TGRQLKSKSPTLSYTQYFAESLIREAESDEKVVAIHAAMGGGTGLNYFQKRFPERCFDVG 432
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR +DQV HDVDLQ+LPVRFA+DRAGLVGAD
Sbjct: 433 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFALDRAGLVGAD 492
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD +MACLPNMVVM
Sbjct: 493 GPTHCGAFDVAYMACLPNMVVM 514
>gi|357111282|ref|XP_003557443.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Brachypodium distachyon]
Length = 713
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 194/382 (50%), Positives = 234/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR+T GL E+ HDAFG GHSSTSISA L GMAV RDL GK N
Sbjct: 155 MHTIRKTSGLAGFPKRDESAHDAFGAGHSSTSISAAL----------GMAVARDLQGKKN 204
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NN+G L+KA
Sbjct: 205 HVISVIGDGAMTAGQAYEAMNNSGYLDSNMIVVLNDNKQVSLPTATMDGPAKPVGALSKA 264
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L S+ +FR+L + A K ++ GG HE+ D ++R + + + + FE+LGLY
Sbjct: 265 LTKLQSSTKFRKLREAA---KTITKQIGGSTHEVAAKVDEYARGMISATGSSLFEELGLY 321
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGH+LEDL + ++VK++P PG VLIH++TEK K P +
Sbjct: 322 YIGPVDGHSLEDLVTIFQKVKSMPAPGPVLIHIVTEKGKGYPPAEAAADKMHGVVKFDPV 381
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D + MGGGTGLN FQK FP RCFDVG
Sbjct: 382 TGKQFKTKSPTLSYTQYFAESLIREAEADEKVVAIHAAMGGGTGLNYFQKRFPERCFDVG 441
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAG+AAEG+KPFCAIYSSFLQR +DQV HDVDLQ+LPVRFA+DRAGLVGAD
Sbjct: 442 IAEQHAVTFAAGMAAEGMKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFAMDRAGLVGAD 501
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 502 GPTHCGAFDVTYMACLPNMVVM 523
>gi|356529695|ref|XP_003533424.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Glycine max]
Length = 712
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/382 (51%), Positives = 234/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR+T GL E+V+D FG GHSSTSISAGL GMAV RDLLGK N
Sbjct: 154 MHTIRKTSGLAGFPKREESVYDVFGTGHSSTSISAGL----------GMAVARDLLGKKN 203
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
++SVI +GA A +YEA+NNAG L+ A
Sbjct: 204 SIVSVIGDGAMTAGQAYEAMNNAGFLDSNMIIILNDNKQVSLPTATIDGPATPVGALSSA 263
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L ++ ++ +FR+L + A K ++ GG H+ +D ++R + +GS + FE+LGLY
Sbjct: 264 LSKIQASTKFRKLREAA---KGITKQIGGTTHQLAAKVDEYARGMISGSGSTLFEELGLY 320
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL +L++VK +P PG LIHV+TEK K P +
Sbjct: 321 YIGPVDGHNIEDLVTILEKVKEMPAPGPTLIHVVTEKGKGYPPAEVAADKMHGVVKFVPT 380
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L DN+ MGGGTGLN F K FP RCFDVG
Sbjct: 381 SGHQLKPKSSTLTYTQYFAESLIKEAEIDNKIVAIHAAMGGGTGLNYFHKRFPDRCFDVG 440
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 441 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 500
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 501 GPTHCGAFDITYMACLPNMVVM 522
>gi|218199226|gb|EEC81653.1| hypothetical protein OsI_25196 [Oryza sativa Indica Group]
Length = 713
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 194/382 (50%), Positives = 233/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ HDAFG GHSSTSISA L GMAV RDLLGK N
Sbjct: 155 MHTIRQTSGLAGFPKRDESAHDAFGAGHSSTSISAAL----------GMAVARDLLGKKN 204
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NN+G L+KA
Sbjct: 205 HVISVIGDGAMTAGQAYEAMNNSGYLDSNMIVVLNDNKQVSLPTATLDGPATPVGALSKA 264
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L S+ + R+L + A K ++ GGQ HE+ D ++R + + S + FE+LGLY
Sbjct: 265 LTKLQSSTKLRRLREAA---KTVTKQIGGQAHEVAAKVDEYARGMVSASGSTLFEELGLY 321
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGH+++DL + +VK++P PG VL+H++TEK K P +
Sbjct: 322 YIGPVDGHSVDDLVAIFNKVKSMPAPGPVLVHIVTEKGKGYPPAEAAADRMHGVVKFDPT 381
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLN F K FP RCFDVG
Sbjct: 382 TGRQFKSKCSTLSYTQYFAEALIREAEADDKVVGIHAAMGGGTGLNYFHKRFPERCFDVG 441
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR +DQV HDVDLQ+LPVRFA+DRAGLVGAD
Sbjct: 442 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFAMDRAGLVGAD 501
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD +MACLPNMVVM
Sbjct: 502 GPTHCGAFDVAYMACLPNMVVM 523
>gi|115470975|ref|NP_001059086.1| Os07g0190000 [Oryza sativa Japonica Group]
gi|75225072|sp|Q6YU51.1|DXS2_ORYSJ RecName: Full=Probable 1-deoxy-D-xylulose-5-phosphate synthase 2,
chloroplastic; Short=1-deoxyxylulose-5-phosphate
synthase; Short=DXP synthase; Short=DXPS; Flags:
Precursor
gi|34394179|dbj|BAC84616.1| putative 1-deoxyxylulose 5-phosphate synthase [Oryza sativa
Japonica Group]
gi|50509413|dbj|BAD31023.1| putative 1-deoxyxylulose 5-phosphate synthase [Oryza sativa
Japonica Group]
gi|113610622|dbj|BAF21000.1| Os07g0190000 [Oryza sativa Japonica Group]
gi|215704796|dbj|BAG94824.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636586|gb|EEE66718.1| hypothetical protein OsJ_23394 [Oryza sativa Japonica Group]
Length = 713
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 194/382 (50%), Positives = 233/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ HDAFG GHSSTSISA L GMAV RDLLGK N
Sbjct: 155 MHTIRQTSGLAGFPKRDESAHDAFGAGHSSTSISAAL----------GMAVARDLLGKKN 204
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NN+G L+KA
Sbjct: 205 HVISVIGDGAMTAGQAYEAMNNSGYLDSNMIVVLNDNKQVSLPTATLDGPATPVGALSKA 264
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L S+ + R+L + A K ++ GGQ HE+ D ++R + + S + FE+LGLY
Sbjct: 265 LTKLQSSTKLRRLREAA---KTVTKQIGGQAHEVAAKVDEYARGMVSASGSTLFEELGLY 321
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGH+++DL + +VK++P PG VL+H++TEK K P +
Sbjct: 322 YIGPVDGHSVDDLVAIFNKVKSMPAPGPVLVHIVTEKGKGYPPAEAAADRMHGVVKFDPT 381
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLN F K FP RCFDVG
Sbjct: 382 TGRQFKSKCSTLSYTQYFAEALIREAEADDKVVGIHAAMGGGTGLNYFHKRFPERCFDVG 441
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR +DQV HDVDLQ+LPVRFA+DRAGLVGAD
Sbjct: 442 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFAMDRAGLVGAD 501
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD +MACLPNMVVM
Sbjct: 502 GPTHCGAFDVAYMACLPNMVVM 523
>gi|40317612|gb|AAP14354.2| 1-deoxy-D-xylulose-5-phosphate synthase [Andrographis paniculata]
Length = 585
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 198/382 (51%), Positives = 234/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +DAFG GHSSTSISA L GMAVGRDLLGK+N
Sbjct: 21 MHTIRQGFGLAGFPKRDESPYDAFGAGHSSTSISAAL----------GMAVGRDLLGKSN 70
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NNAG L++A
Sbjct: 71 HVISVIGDGAMTAGQAYEAMNNAGFLDSNLIIVLNDNNQVSLPTATVDGPAPPVGALSEA 130
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL ++ +FR L + A K ++ G +HE +D + R + RA FE+LGLY
Sbjct: 131 LTRLQASRKFRLLREAA---KSMTKQMGEHVHETAAKVDTYVRGMAGPPRATLFEELGLY 187
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL-------------- 184
YIGPVDGH++EDL ++LK+VK +P PG VLIH++TEK K P +
Sbjct: 188 YIGPVDGHSIEDLVHILKKVKEMPAPGPVLIHILTEKGKGYSPAEAAADKMHGVVKFDVR 247
Query: 185 ------------QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
T+ F + L D++ MGGGTGLN+FQK FP RCFDVG
Sbjct: 248 TGKQAKSKSKTKSYTQYFAESLVAEAKQDDKIVAIHAAMGGGTGLNIFQKQFPDRCFDVG 307
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRF +DRAGLVGAD
Sbjct: 308 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFIMDRAGLVGAD 367
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFDTT+MACLPNMVVM
Sbjct: 368 GPTHCGAFDTTYMACLPNMVVM 389
>gi|154815951|emb|CAN89181.1| 1-Deoxy-D-xylulose 5-phosphate synthase 2 precursor [Medicago
truncatula]
Length = 710
Score = 347 bits (889), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 194/382 (50%), Positives = 235/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR+T GL E+VHDAFGVGHSSTSISAGL GMA+ RDLLGK N
Sbjct: 153 MHTIRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGL----------GMAIARDLLGKKN 202
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
VISVI +GA A +YEA+NNAG L+
Sbjct: 203 SVISVIGDGAMTAGQAYEALNNAGFLDSNLIVILNDNKQVSLPTATLDGPATPVGALSST 262
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH----EIDAFSREIEAGSRACFFEDLGLY 138
L ++ ++ +FR+L + ++K+ ++ GGQ H ++D ++R+ +GS + FE+LG+Y
Sbjct: 263 LSKIQASRKFRKLRE---ATKNITKQIGGQTHLVASKVDKYARDFISGSGSSLFEELGMY 319
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPL---------------- 182
YIGP+DGHN+EDL + ++VKA P G VLIH++TEK K P
Sbjct: 320 YIGPMDGHNIEDLVNIFEKVKATPASGPVLIHIVTEKGKGYPPAVAAADRMHGVVKFDPK 379
Query: 183 ----------KLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F L DN+ MGGGTGLN FQK FP RCFDVG
Sbjct: 380 TGHQFKPKPSTLAYTQYFADSLIKEAEMDNKIVAIHAAMGGGTGLNYFQKRFPDRCFDVG 439
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYS+FLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 440 IAEQHAVTFAAGLATEGLKPFCAIYSTFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 499
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNM+VM
Sbjct: 500 GPTHCGAFDITFMACLPNMIVM 521
>gi|40849969|gb|AAR95699.1| putative 1-D-deoxyxylulose 5-phosphate synthase [Ginkgo biloba]
Length = 738
Score = 346 bits (887), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 194/382 (50%), Positives = 234/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ HDAFG GHSSTSISAGL GMAVGRDLLGK N
Sbjct: 179 MHTIRQTSGLAGFPKRDESEHDAFGAGHSSTSISAGL----------GMAVGRDLLGKRN 228
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HV++VI +GA A +YEA+NN+G L+ A
Sbjct: 229 HVVAVIGDGAMTAGQAYEAMNNSGYLDSNMIIILNDNKQVSLPTATLDGAAPPVGALSSA 288
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L + S+ + R+L + A K ++ GGQ HEI D ++R + + + + FE+LGLY
Sbjct: 289 LTKPQSSKKLRKLREAA---KSLTKQIGGQTHEIASKVDEYARGMISPAGSSLFEELGLY 345
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+ED+ +L +VK++P PG VLIH++T+K K P +
Sbjct: 346 YIGPVDGHNMEDMVTILDKVKSMPAPGPVLIHLVTDKGKGYPPAEKAADKLHGVVNFDPA 405
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F L D++ MGGGTGLN FQK FP RCFDVG
Sbjct: 406 TGKQFKSKSSTLSYTQYFADALIAEAEEDSKIVAIHAAMGGGTGLNYFQKRFPDRCFDVG 465
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAG+A EGLKPFCAIYS+FLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 466 IAEQHAVTFAAGMATEGLKPFCAIYSTFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 525
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 526 GPTHCGAFDITYMACLPNMVVM 547
>gi|46361693|gb|AAS89342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Taxus x media]
Length = 742
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 195/382 (51%), Positives = 233/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +IRQT G+ E+ HDAFG GHSSTSISA L GMA GRDLLG N
Sbjct: 184 MSSIRQTSGIAGFPKRAESEHDAFGAGHSSTSISAAL----------GMAAGRDLLGLPN 233
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
H I+VI +GA A +YEA+NNAG L+KA
Sbjct: 234 HCIAVIGDGAMTAGQAYEAMNNAGFLDSNLIIILNDNKQVSLPTATVDGPAPPVGALSKA 293
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L ++ ++ +FR L + A KD Q+ GG HEI D ++R + + R+ E+LGLY
Sbjct: 294 LSKIQASKKFRLLREAA---KDITQQIGGPTHEIAAKVDEYARGMISAPRSTLLEELGLY 350
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGH+++DL +L+ VKA+P PG VLIHV+TEK K P +
Sbjct: 351 YIGPVDGHSIQDLVAILENVKAMPAPGPVLIHVVTEKGKGYPPAEKAADRLHGVVKFDPS 410
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLN+FQK FP RCFDVG
Sbjct: 411 TGKQFKAKSPTLSYTQYFAEGLIAEAEKDDKIVGIHAAMGGGTGLNIFQKRFPERCFDVG 470
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 471 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 530
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNM+VM
Sbjct: 531 GPTHCGAFDITYMACLPNMIVM 552
>gi|215478266|gb|ACJ67020.1| 1-deoxy-D-xylulose 5-phosphate synthase type II [Pinus taeda]
Length = 740
Score = 343 bits (881), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 191/382 (50%), Positives = 234/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT G+ E+ HDAFG GHSSTSISA VGMAVGRDLLGK+N
Sbjct: 179 MSTLRQTSGIAGFPRRVESEHDAFGAGHSSTSISAA----------VGMAVGRDLLGKHN 228
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVI VI +GA A +YEA+NNAG L+ A
Sbjct: 229 HVIGVIGDGAMTAGQAYEAMNNAGFLDSNMIIILNDNKQVSLPTANLDGPIPPVGALSSA 288
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L S+ R+L + A K ++ G MHE +D ++R + +GSR+ F++LGLY
Sbjct: 289 LSKLQSSKPLRELREVA---KGVTKQLGAPMHELAAKVDEYARGMISGSRSSLFDELGLY 345
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+ED+ +L+++K++P G VLIH++TEK K P +
Sbjct: 346 YIGPVDGHNIEDMVTILEKIKSMPATGPVLIHLVTEKGKGYPPAEEAADKLHGVVKFDPV 405
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLN FQK FP RCFDVG
Sbjct: 406 TGKQFKSKSSVLSYTQYFAEALIAEAEVDSKIVAIHAAMGGGTGLNYFQKKFPERCFDVG 465
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYS+FLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 466 IAEQHAVTFAAGLATEGLKPFCAIYSTFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 525
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCG+FD +MACLPNM+VM
Sbjct: 526 GPTHCGSFDVAYMACLPNMIVM 547
>gi|153799536|gb|ABS50519.1| 1-deoxy-D-xylulose 5-phosphate synthase type II [Picea abies]
Length = 740
Score = 343 bits (879), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 235/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ +DAFG GHSSTSISAGL GMAVGRDLL K+N
Sbjct: 179 MHTIRQTSGLAGFPKRDESKYDAFGAGHSSTSISAGL----------GMAVGRDLLRKSN 228
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HV++VI +GA A +YEA+NN+G L +A
Sbjct: 229 HVVAVIGDGAMTAGQAYEAMNNSGYLESNLIIILNDNKQVSLPTATLDGAAPPVGALTRA 288
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L S+ + R+L + A K ++ GGQ HE +D ++R I + + FE+LGLY
Sbjct: 289 LTKLQSSKKIRKLREAA---KGLTKQIGGQTHEMASKVDKYTRGIINPAASSLFEELGLY 345
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+ED+ +L+++K++PD G VLIH++TEK K P +
Sbjct: 346 YIGPVDGHNIEDMVTILEKIKSMPDSGPVLIHLVTEKGKGYPPAEEAADKLHGVVKFDPA 405
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLN FQK FP RCFDVG
Sbjct: 406 TGKQFKSKSSVLSYTQYFAESLIAEAEVDSKIVAIHAAMGGGTGLNYFQKKFPERCFDVG 465
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYS+FLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 466 IAEQHAVTFAAGLATEGLKPFCAIYSTFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 525
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCG+FD +MACLPNMVVM
Sbjct: 526 GPTHCGSFDVAYMACLPNMVVM 547
>gi|224284202|gb|ACN39837.1| unknown [Picea sitchensis]
Length = 740
Score = 343 bits (879), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 235/382 (61%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ +DAFG GHSSTSISAGL GMAVGRDLL K+N
Sbjct: 179 MHTIRQTSGLAGFPKRDESKYDAFGAGHSSTSISAGL----------GMAVGRDLLRKSN 228
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HV++VI +GA A +YEA+NN+G L +A
Sbjct: 229 HVVAVIGDGAMTAGQAYEAMNNSGYLESNLIIILNDNKQVSLPTATLDGAAPPVGALTRA 288
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L S+ + R+L + A K ++ GGQ HE +D ++R I + + FE+LGLY
Sbjct: 289 LTKLQSSKKLRKLREAA---KGLTKQIGGQTHEMASKVDKYTRGIINPAASSLFEELGLY 345
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+ED+ +L+++K++PD G VLIH++TEK K P +
Sbjct: 346 YIGPVDGHNIEDMVTILEKIKSMPDSGPVLIHLVTEKGKGYPPAEEAADKLHGVVKFDPA 405
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLN FQK FP RCFDVG
Sbjct: 406 TGKQFKSKSSVLSYTQYFAESLIAEAEVDSKIVAIHAAMGGGTGLNYFQKKFPERCFDVG 465
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYS+FLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 466 IAEQHAVTFAAGLATEGLKPFCAIYSTFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 525
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCG+FD +MACLPNMVVM
Sbjct: 526 GPTHCGSFDVAYMACLPNMVVM 547
>gi|91771913|gb|ABE60813.1| CLA1-like protein [Brassica rapa]
Length = 716
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 195/382 (51%), Positives = 231/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ HD FG GHSST+ISAGLR MAVGRDL GKNN
Sbjct: 160 MPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLR----------MAVGRDLKGKNN 209
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 210 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSA 269
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SNP R+L + A K ++ GG MH+ +D ++R + +G+ + FE+LGLY
Sbjct: 270 LSRLQSNPALRELREVA---KGVTKQIGGPMHQLAAKVDEYARGMISGTGSTLFEELGLY 326
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+VK+ G VLIHVITEK + P
Sbjct: 327 YIGPVDGHNIDDLVAILKEVKSARTTGPVLIHVITEKGRGYPYAERADDKYHGVVKFDPA 386
Query: 183 KLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L MGGGTGLNLFQ+ FP RCFDVG
Sbjct: 387 TGKQFKTTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVG 446
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 447 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 506
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNM+VM
Sbjct: 507 GPTHCGAFDVTFMACLPNMIVM 528
>gi|297804692|ref|XP_002870230.1| hypothetical protein ARALYDRAFT_493326 [Arabidopsis lyrata subsp.
lyrata]
gi|297316066|gb|EFH46489.1| hypothetical protein ARALYDRAFT_493326 [Arabidopsis lyrata subsp.
lyrata]
Length = 717
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 194/382 (50%), Positives = 231/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ HD FG GHSST+ISAGL GMAVGRDL GKNN
Sbjct: 161 MPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGL----------GMAVGRDLKGKNN 210
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 211 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSA 270
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SNP R+L + A K ++ GG MH+ +D ++R + +G+ + FE+LGLY
Sbjct: 271 LSRLQSNPALRELREVA---KGMTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLY 327
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+VK+ G VLIHV+TEK + P
Sbjct: 328 YIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGVVKFDPA 387
Query: 183 KLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L MGGGTGLNLFQ+ FP RCFDVG
Sbjct: 388 TGKQFKSTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVG 447
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 448 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 507
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNM+VM
Sbjct: 508 GPTHCGAFDVTFMACLPNMIVM 529
>gi|1399261|gb|AAC49368.1| DEF [Arabidopsis thaliana]
Length = 717
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 194/382 (50%), Positives = 231/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ HD FG GHSST+ISAGL GMAVGRDL GKNN
Sbjct: 161 MPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGL----------GMAVGRDLKGKNN 210
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 211 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSA 270
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SNP R+L + A K ++ GG MH+ +D ++R + +G+ + FE+LGLY
Sbjct: 271 LSRLQSNPALRELREVA---KGMTKQIGGPMHQLAAKVDVYARGMISGTGSSLFEELGLY 327
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+VK+ G VLIHV+TEK + P
Sbjct: 328 YIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGVVKFDPA 387
Query: 183 KLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L MGGGTGLNLFQ+ FP RCFDVG
Sbjct: 388 TGRQFKTTNETQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVG 447
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 448 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 507
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNM+VM
Sbjct: 508 GPTHCGAFDVTFMACLPNMIVM 529
>gi|15234642|ref|NP_193291.1| Deoxyxylulose-5-phosphate synthase [Arabidopsis thaliana]
gi|13124705|sp|Q38854.2|DXS_ARATH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic; Short=1-deoxyxylulose-5-phosphate
synthase; Short=DXP synthase; Short=DXPS; AltName:
Full=Protein CLOROPLASTOS ALTERADOS 1; Flags: Precursor
gi|5281019|emb|CAB45992.1| DEF (CLA1) protein [Arabidopsis thaliana]
gi|7268304|emb|CAB78598.1| DEF (CLA1) protein [Arabidopsis thaliana]
gi|26983842|gb|AAN86173.1| putative DEF (CLA1) protein [Arabidopsis thaliana]
gi|332658225|gb|AEE83625.1| Deoxyxylulose-5-phosphate synthase [Arabidopsis thaliana]
gi|392931109|gb|AFM91070.1| 1-deoxy-D-xylulose 5-phosphate synthase [synthetic construct]
Length = 717
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 194/382 (50%), Positives = 231/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ HD FG GHSST+ISAGL GMAVGRDL GKNN
Sbjct: 161 MPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGL----------GMAVGRDLKGKNN 210
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 211 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSA 270
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SNP R+L + A K ++ GG MH+ +D ++R + +G+ + FE+LGLY
Sbjct: 271 LSRLQSNPALRELREVA---KGMTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLY 327
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+VK+ G VLIHV+TEK + P
Sbjct: 328 YIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGVVKFDPA 387
Query: 183 KLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L MGGGTGLNLFQ+ FP RCFDVG
Sbjct: 388 TGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVG 447
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 448 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 507
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNM+VM
Sbjct: 508 GPTHCGAFDVTFMACLPNMIVM 529
>gi|2894445|emb|CAA74713.1| transketolase [Arabidopsis thaliana]
Length = 739
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 193/382 (50%), Positives = 231/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ HD FG GHSST+ISAGL GMA+GRDL GKNN
Sbjct: 183 MPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGL----------GMAIGRDLKGKNN 232
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 233 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSA 292
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L RL SNP R+L + A K ++ GG MH++ D ++R + +G+ + FE+LGLY
Sbjct: 293 LSRLQSNPALRELREVA---KGMTKQIGGPMHQVAAKVDVYARGMISGTGSSLFEELGLY 349
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+VK+ G VLIHV+TEK + P
Sbjct: 350 YIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGVVKFDPA 409
Query: 183 KLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L MGGGTGLNLFQ+ FP RCFDVG
Sbjct: 410 TGRQFKTTNETQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVG 469
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 470 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 529
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNM+VM
Sbjct: 530 GPTHCGAFDVTFMACLPNMIVM 551
>gi|215478268|gb|ACJ67021.1| 1-deoxy-D-xylulose 5-phosphate synthase type I [Pinus taeda]
Length = 707
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 194/378 (51%), Positives = 230/378 (60%), Gaps = 90/378 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT G+ E+ HDAFG GHSSTSISA VGMAVGRDLLGK+N
Sbjct: 152 MSTLRQTSGIAGFPRRVESEHDAFGAGHSSTSISAA----------VGMAVGRDLLGKHN 201
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK---------------------------ALKRL 86
HVI VI +GA A +YEA+NNAG L+ AL +L
Sbjct: 202 HVIGVIGDGAMTAGQAYEAMNNAGFLDSNMIVILNDNKQVSLPTANLDGPIPPVGALSKL 261
Query: 87 HSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGP 142
S+ R+L + A K ++ G MHE +D ++R + +GSR+ FE+LGLYYIGP
Sbjct: 262 QSSKPLRELREVA---KGVTKQLGAPMHELAAKVDEYARGMISGSRSTLFEELGLYYIGP 318
Query: 143 VDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PLKLQQ 186
VDGHN++DL +L++VKA G VLIHV+TEK + P +Q
Sbjct: 319 VDGHNIDDLLTILREVKATHTTGPVLIHVVTEKGRGYPYAERAADKYHGVVKFDPATGKQ 378
Query: 187 ----------TRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQ 223
T F + L + MGGGTGLN+F K FP RCFDVGIAEQ
Sbjct: 379 FKGKAPTQTYTTYFAEALISEAEADKNIVAIHAAMGGGTGLNMFSKRFPTRCFDVGIAEQ 438
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
HAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGADGPTH
Sbjct: 439 HAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVIHDVDLQKLPVRFAMDRAGLVGADGPTH 498
Query: 284 CGAFDTTFMACLPNMVVM 301
CGAFD T++ACLPNMVVM
Sbjct: 499 CGAFDVTYLACLPNMVVM 516
>gi|171850410|gb|ACB55417.1| 1-deoxy-D-xylulose 5-phosphate synthase [Picrorhiza kurrooa]
Length = 687
Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 194/380 (51%), Positives = 226/380 (59%), Gaps = 91/380 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ HDAFGVGHSSTSISA L GMAVGRDLLGK+N
Sbjct: 129 MSTIRQTFGLAGFPKREESAHDAFGVGHSSTSISAALG---------GMAVGRDLLGKDN 179
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN--------------------------------K 81
HVISVI +GA A +YEA+NNAG L+ K
Sbjct: 180 HVISVIGDGAMTAGQAYEAMNNAGFLDSNLIIVLNEQTKQVSLPTATIDGPAPPVGALTK 239
Query: 82 ALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ-MHEIDAFSREIEAGSRACFFEDLGLYYI 140
AL +L FRQL + A K ++ GG+ ++D F+ + A FE+LG+YYI
Sbjct: 240 ALTKLQLGTSFRQLPEAA---KGIAKQVGGEGAAKLDTFASGLMGSPGASLFEELGIYYI 296
Query: 141 GPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------- 183
GP DGH++ Y KQ+K +P PG V++H++TEK K P +
Sbjct: 297 GPGDGHSINYFVYFFKQIKEMPAPGPVMVHIVTEKGKGSPPAEAAANKMRGVVKFEPSTG 356
Query: 184 ---------LQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIA 221
L T+ F + L + MGGGTGLN FQKHFP RCFDVGIA
Sbjct: 357 KQIKSKPKTLSYTQYFAESLIAKAAVNKKIVAVHAAMGGGTGLNFFQKHFPERCFDVGIA 416
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
+QHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRF +DRAGLVGADGP
Sbjct: 417 KQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFLMDRAGLVGADGP 476
Query: 282 THCGAFDTTFMACLPNMVVM 301
THCGAFDTTFMACLPNMVVM
Sbjct: 477 THCGAFDTTFMACLPNMVVM 496
>gi|194396283|gb|ACF60511.1| 1-D-deoxyxylulose 5-phosphate synthase [Nicotiana tabacum]
Length = 717
Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 194/382 (50%), Positives = 230/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+V+D FG GHSST+ISAGL GMAVGRDL GKNN
Sbjct: 158 MSTLRQTDGLAGFTKRSESVYDCFGTGHSSTTISAGL----------GMAVGRDLKGKNN 207
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +GA A +YEA+NNAG L+ A
Sbjct: 208 NVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPAPPVGALSSA 267
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 268 LSRLQSNRPLRELREVA---KGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 324
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+V++ G VLIHVITEK + P
Sbjct: 325 YIGPVDGHNIDDLISILKEVRSTKTTGPVLIHVITEKGRGYPYAERAADKYHGVAKFDPA 384
Query: 183 KLQQTRLFCKI-----------------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q ++ K + MGGGTG+NLF + FP RCFDVG
Sbjct: 385 TGKQFKVSAKTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFHRRFPTRCFDVG 444
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 445 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 504
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNMVVM
Sbjct: 505 GPTHCGAFDVTFMACLPNMVVM 526
>gi|449454454|ref|XP_004144970.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Cucumis sativus]
gi|449473276|ref|XP_004153837.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Cucumis sativus]
gi|449507648|ref|XP_004163093.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 718
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/383 (50%), Positives = 230/383 (60%), Gaps = 96/383 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ D+FG GHSST+ISAGL GMAVGRDL G+ N
Sbjct: 159 MSTIRQTNGLSGFTKRSESEFDSFGAGHSSTTISAGL----------GMAVGRDLKGRKN 208
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +GA A +YEA+NNAG L+ A
Sbjct: 209 NVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSA 268
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 269 LSRLQSNRPLRELREVA---KGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 325
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK----------------------- 175
YIGPVDGHN++DL +LK+VK+ G VLIHV+TEK
Sbjct: 326 YIGPVDGHNVDDLVSILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVTKFDPA 385
Query: 176 ----EKAMLPLKLQQTRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDV 218
+KA P + T F + L MGGGTGLNLFQ+ FP RCFDV
Sbjct: 386 TGKQQKAKAPTQ-SYTTYFAEALIAEAERDKDIIAIHAAMGGGTGLNLFQRRFPTRCFDV 444
Query: 219 GIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGA 278
GIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGA
Sbjct: 445 GIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGA 504
Query: 279 DGPTHCGAFDTTFMACLPNMVVM 301
DGPTHCG+FD TFMACLPNMVVM
Sbjct: 505 DGPTHCGSFDVTFMACLPNMVVM 527
>gi|302793999|ref|XP_002978764.1| hypothetical protein SELMODRAFT_268187 [Selaginella moellendorffii]
gi|300153573|gb|EFJ20211.1| hypothetical protein SELMODRAFT_268187 [Selaginella moellendorffii]
Length = 636
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 196/382 (51%), Positives = 231/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSSTSISAGL GMAV RDL+G N
Sbjct: 76 MHTMRQTNGLSGFTKRSESEYDSFGAGHSSTSISAGL----------GMAVARDLMGNKN 125
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NNAG L+ A
Sbjct: 126 HVISVIGDGAMTAGQAYEAMNNAGYLDSNMIVILNDNKQVSLPTATLDGPAPPVGALSSA 185
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L S+ R+L + A K ++ GGQMHE +D ++R + +GS + FE+LGLY
Sbjct: 186 LSKLQSSRPLRELREVA---KGVTKQLGGQMHELAAKVDEYARGMISGSGSTLFEELGLY 242
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGH++EDL +LK+VK G VLIH++TEK + P
Sbjct: 243 YIGPVDGHSIEDLVTILKEVKNTRTTGPVLIHIVTEKGRGYPYAERASDKYHGVVKFDPA 302
Query: 183 KLQQ----------TRLFCKIL------DN-------RMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L DN MGGGTGLN+FQK FP RCFDVG
Sbjct: 303 TGKQFKGKTATQAYTTYFAEALIAEAEVDNGIIAIHAAMGGGTGLNMFQKRFPDRCFDVG 362
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 363 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 422
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 423 GPTHCGAFDVTYMACLPNMVVM 444
>gi|30144404|gb|AAP14353.1| 1-deoxy-D-xylulose-5-phosphate synthase [Andrographis paniculata]
Length = 691
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 198/382 (51%), Positives = 232/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSST+ISAGL GMAVGRDL G+ N
Sbjct: 132 MPTLRQTDGLCGFTKRSESNYDCFGAGHSSTTISAGL----------GMAVGRDLQGRKN 181
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HV++VI +GA IA +YEA+NNAG L+ A
Sbjct: 182 HVVAVIGDGAMIAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSA 241
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 242 LSRLQSNRPLRELREVA---KGVTKQIGGSMHELAAKVDEYARGLISGSGSTLFEELGLY 298
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPL 182
YIGPVDGHN++DL +LK+VK+ G V IHV+TEK EKA P
Sbjct: 299 YIGPVDGHNIDDLTAILKEVKSTKTTGPVSIHVVTEKGRGYSYAEKAADKYHGVAKFDPA 358
Query: 183 KLQQ----------TRLFCKIL------DN-------RMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L DN MGGGTGLNLF + FP RCFDVG
Sbjct: 359 TGKQFKSSTPTQAYTTYFAEALIAEAEQDNIIVAIHAAMGGGTGLNLFDRRFPTRCFDVG 418
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 419 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 478
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 479 GPTHCGAFDITYMACLPNMVVM 500
>gi|302805853|ref|XP_002984677.1| hypothetical protein SELMODRAFT_268893 [Selaginella moellendorffii]
gi|300147659|gb|EFJ14322.1| hypothetical protein SELMODRAFT_268893 [Selaginella moellendorffii]
Length = 636
Score = 336 bits (862), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 195/382 (51%), Positives = 230/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSSTSISAGL GMAV RDL+G N
Sbjct: 76 MHTLRQTNGLSGFTKRSESEYDSFGAGHSSTSISAGL----------GMAVARDLMGNKN 125
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NNAG L+ A
Sbjct: 126 HVISVIGDGAMTAGQAYEAMNNAGYLDSNMIVILNDNKQVSLPTATLDGPAPPVGALSSA 185
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L S+ R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 186 LSKLQSSRPLRELREVA---KGVTKQLGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 242
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGH++EDL +LK+VK G VLIH++TEK + P
Sbjct: 243 YIGPVDGHSIEDLVTILKEVKNTRTTGPVLIHIVTEKGRGYPYAERASDKYHGVVKFDPA 302
Query: 183 KLQQ----------TRLFCKIL------DN-------RMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L DN MGGGTGLN+FQK FP RCFDVG
Sbjct: 303 TGKQFKGKTATQAYTTYFAEALIAEAEVDNGIIAIHAAMGGGTGLNMFQKRFPDRCFDVG 362
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 363 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 422
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 423 GPTHCGAFDVTYMACLPNMVVM 444
>gi|255068751|emb|CBA12009.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nicotiana tabacum]
Length = 717
Score = 336 bits (862), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 230/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSST+ISAGL GMAVGRDL GKNN
Sbjct: 158 MSTLRQTDGLAGFTKRSESEYDCFGTGHSSTTISAGL----------GMAVGRDLKGKNN 207
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +GA A +YEA+NNAG L++A
Sbjct: 208 NVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPAPPVGALSRA 267
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 268 LSRLQSNRPLRELREVA---KGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 324
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+V++ G VLIHVITEK + P
Sbjct: 325 YIGPVDGHNIDDLISILKEVRSTKTTGPVLIHVITEKGRGYPYAERAADKYHGVAKFDPA 384
Query: 183 KLQQTRLFCKI-----------------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q ++ K + MGGGTG+N+F + FP RCFDVG
Sbjct: 385 TGKQFKVSAKTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNIFHRRFPNRCFDVG 444
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 445 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 504
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNMVVM
Sbjct: 505 GPTHCGAFDVTFMACLPNMVVM 526
>gi|357517205|ref|XP_003628891.1| 1-Deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
gi|355522913|gb|AET03367.1| 1-Deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
Length = 736
Score = 336 bits (861), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 194/405 (47%), Positives = 234/405 (57%), Gaps = 114/405 (28%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR+T GL E+VHDAFGVGHSSTSISAGL GMA+ RDLLGK N
Sbjct: 153 MHTIRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGL----------GMAIARDLLGKKN 202
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
VISVI +GA A +YEA+NNAG L+
Sbjct: 203 SVISVIGDGAMTAGQAYEALNNAGFLDSNLIVILNDNKQVSLPTATLDGPATPVGALSST 262
Query: 83 LKRLHSNPQFRQLCQEAFSS-----------------------KDKKQKFGGQMH----E 115
L ++ ++ +FR+L + S ++ ++ GGQ H +
Sbjct: 263 LSKIQASRKFRKLREATKVSPFRPLYYSKTSIPFWNLTLIYLLQNITKQIGGQTHLVASK 322
Query: 116 IDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK 175
+D ++R+ +GS + FE+LG+YYIGP+DGHN+EDL + ++VKA P G VLIH++TEK
Sbjct: 323 VDKYARDFISGSGSSLFEELGMYYIGPMDGHNIEDLVNIFEKVKATPASGPVLIHIVTEK 382
Query: 176 EKAMLPL--------------------------KLQQTRLFCKIL------DNR------ 197
K P L T+ F L DN+
Sbjct: 383 GKGYPPAVAAADRMHGVVKFDPKTGHQFKPKPSTLAYTQYFADSLIKEAEMDNKIVAIHA 442
Query: 198 -MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVA 256
MGGGTGLN FQK FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYS+FLQR +DQV
Sbjct: 443 AMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSTFLQRGYDQVV 502
Query: 257 HDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
HDVDLQKLPVRFA+DRAGLVGADGPTHCGAFD TFMACLPNM+VM
Sbjct: 503 HDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMACLPNMIVM 547
>gi|343466207|gb|AEM42997.1| 1-deoxyxylulose-5-phosphate synthase [Siraitia grosvenorii]
Length = 719
Score = 336 bits (861), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 193/382 (50%), Positives = 229/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ D FG GHSST+ISAGL GMAVGRDL G+ N
Sbjct: 160 MSTIRQTNGLSGFTKRSESEFDCFGAGHSSTTISAGL----------GMAVGRDLKGRKN 209
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 210 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSA 269
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 270 LSRLQSNRPLRELREVA---KGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 326
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+VK+ G VLIHV+TEK + P
Sbjct: 327 YIGPVDGHNMDDLVSILKEVKSTNTTGPVLIHVVTEKGRGYPYAERAADKYHGVTKFDPA 386
Query: 183 KLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L MGGGTGLNLFQ+ FP RCFDVG
Sbjct: 387 TGKQQKSKGATQSYTTYFAEALVAEAEVDKDIIAIHAAMGGGTGLNLFQRRFPTRCFDVG 446
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA+EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 447 IAEQHAVTFAAGLASEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 506
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCG+FD TFMACLPNMVVM
Sbjct: 507 GPTHCGSFDVTFMACLPNMVVM 528
>gi|164604984|dbj|BAF98288.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
Length = 720
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 197/382 (51%), Positives = 230/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ +D FG GHSST+ISAGL GMAVGRDL GK N
Sbjct: 160 MYTIRQTNGLSGFTKRSESEYDCFGTGHSSTTISAGL----------GMAVGRDLKGKKN 209
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 210 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 269
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 270 LSRLQSNRPLRELREVA---KGVTKQIGGPMHEWAAKVDEYARGMISGSGSTLFEELGLY 326
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPL 182
YIGPVDGHN++DL +LK+VK+ G VLIHV+TEK EKA P
Sbjct: 327 YIGPVDGHNIDDLIAILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVTKFDPA 386
Query: 183 KLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L MGGGTGLNLF + FP RCFDVG
Sbjct: 387 TGKQFKGSAITQSYTTYFAEALIAEAEVDKDIVAIHAAMGGGTGLNLFLRRFPTRCFDVG 446
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 447 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 506
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNMVVM
Sbjct: 507 GPTHCGAFDVTFMACLPNMVVM 528
>gi|225432422|ref|XP_002277919.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic [Vitis vinifera]
gi|297736933|emb|CBI26134.3| unnamed protein product [Vitis vinifera]
Length = 716
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 196/382 (51%), Positives = 231/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSST+ISAGL GMAVGRDL GKNN
Sbjct: 157 MHTMRQTDGLAGFTKRSESEYDCFGTGHSSTTISAGL----------GMAVGRDLKGKNN 206
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +GA A +YEA+NNAG L+ A
Sbjct: 207 NVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 266
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 267 LSRLQSNRPLRELREVA---KGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 323
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPL 182
YIGPVDGHN++DL +LK+VK+ G VLIHV+TEK EKA P
Sbjct: 324 YIGPVDGHNIDDLVAILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVTKFDPA 383
Query: 183 KLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L MGGGTGLNLF + FP RCFDVG
Sbjct: 384 TGKQFKSSAPTQSYTTYFAEALIAEAEVDKDIVAIHAAMGGGTGLNLFHRRFPTRCFDVG 443
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EG+KPFCAIYSSF+QR +DQV HDVDLQKLPV+FA+DRAGLVGAD
Sbjct: 444 IAEQHAVTFAAGLACEGIKPFCAIYSSFMQRAYDQVVHDVDLQKLPVKFAMDRAGLVGAD 503
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNMVVM
Sbjct: 504 GPTHCGAFDVTFMACLPNMVVM 525
>gi|153799534|gb|ABS50518.1| 1-deoxy-D-xylulose 5-phosphate synthase type I [Picea abies]
Length = 717
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 195/382 (51%), Positives = 230/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSSTSISAGL GMAVGRDL G+NN
Sbjct: 158 MPTLRQTNGLSGFTKRSESEYDCFGAGHSSTSISAGL----------GMAVGRDLKGRNN 207
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A ++EA+NNAG L+ A
Sbjct: 208 HVISVIGDGAMTAGQAFEAMNNAGYLDSNMIVILNDNKQVSLPTANLDGPMPPVGALSSA 267
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L S+ R+L + A K ++ G MHE +D ++R + +GSR+ FE+LGLY
Sbjct: 268 LSKLQSSKPLRELREVA---KGVTKQLGAPMHELAAKVDEYARGMISGSRSTLFEELGLY 324
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +L+ VKA G VLIHV+TEK + P
Sbjct: 325 YIGPVDGHNIDDLLTILQDVKATHTTGPVLIHVVTEKGRGYPYAXRAADKYHGVAKFDPA 384
Query: 183 KLQQ----------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L DN MGGGTGLN+F K FP RCFDVG
Sbjct: 385 TGKQFKGKAPTQTYTAYFAEALISEADIDNXVVAIHAAMGGGTGLNMFSKRFPSRCFDVG 444
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 445 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVIHDVDLQKLPVRFAMDRAGLVGAD 504
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T++ACLPNMVVM
Sbjct: 505 GPTHCGAFDVTYLACLPNMVVM 526
>gi|255551595|ref|XP_002516843.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
gi|223543931|gb|EEF45457.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
Length = 720
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 195/382 (51%), Positives = 231/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T+RQT GL E+ +D FG GHSST+ISAGL GMAVGRDL G+ N
Sbjct: 160 MQTMRQTNGLSGFTKRSESEYDCFGTGHSSTTISAGL----------GMAVGRDLKGRKN 209
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 210 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSA 269
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 270 LSRLQSNKPLRELREVA---KGVTKRIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 326
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPL 182
YIGPVDGHN++DL +LK+VK+ G VLIHV+TEK EKA P
Sbjct: 327 YIGPVDGHNVDDLVAILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVTKFDPA 386
Query: 183 KLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L MGGGTGLNLF + FP RCFDVG
Sbjct: 387 TGKQFKGSASTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVG 446
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 447 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 506
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNMVVM
Sbjct: 507 GPTHCGAFDVTFMACLPNMVVM 528
>gi|46410858|gb|AAS94123.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea
brasiliensis]
Length = 720
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 196/382 (51%), Positives = 229/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ +D FG GHSST+ISAGL GMAVGRDL G+ N
Sbjct: 160 MHTIRQTNGLSGFTKRSESEYDCFGTGHSSTTISAGL----------GMAVGRDLKGRKN 209
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 210 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 269
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 270 LSRLQSNRPLRELREVA---KGVTKRIGGSMHELAAKVDEYARGMISGSGSTLFEELGLY 326
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPL 182
YIGPVDGHN++DL +LK+VK G VLIHV+TEK EKA P
Sbjct: 327 YIGPVDGHNIDDLIAILKEVKGTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVTKFDPA 386
Query: 183 KLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L MGGGTGLNLF + FP RCFDVG
Sbjct: 387 TGKQFKGSAITQSYTTYFAEALIAEAEVDKDIVAIHAAMGGGTGLNLFLRRFPTRCFDVG 446
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 447 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 506
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNMVVM
Sbjct: 507 GPTHCGAFDVTFMACLPNMVVM 528
>gi|189017038|gb|ACD70396.1| putative chloroplast 1-deoxy-D-xylulose 5-phosphate synthase
[Populus trichocarpa]
Length = 685
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 195/382 (51%), Positives = 226/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ +D FG GHSST+ISAGL GMAVGRDL G N
Sbjct: 125 MHTIRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGL----------GMAVGRDLKGGTN 174
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
V++VI +GA A +YEA+NNAG L+ A
Sbjct: 175 KVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSA 234
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 235 LSRLQSNRPLRELREVA---KGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 291
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------ 179
YIGPVDGHN++DL +LK+VK+ G VLIHV+TEK E+A
Sbjct: 292 YIGPVDGHNIDDLIAILKEVKSTKTTGPVLIHVVTEKGRGYPFAERAADKYHGVAKFDPA 351
Query: 180 -------LPLKLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
P T F + L MGGGTGLNLF + FP RCFDVG
Sbjct: 352 TGKQFKASPSTQSYTTYFAEALTAEAEVDKDIVAIHAAMGGGTGLNLFLRRFPTRCFDVG 411
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 412 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 471
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNMVVM
Sbjct: 472 GPTHCGAFDVTFMACLPNMVVM 493
>gi|386081792|gb|AFI98878.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Withania
somnifera]
gi|386082787|gb|AFI98880.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Withania
somnifera]
Length = 717
Score = 333 bits (854), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 191/382 (50%), Positives = 227/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSST+ISAGL GMAVGRDL G+NN
Sbjct: 158 MSTLRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGL----------GMAVGRDLKGRNN 207
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +GA A +YEA+NNAG L+ A
Sbjct: 208 NVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPVPPVGALSSA 267
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 268 LSRLQSNRPLRELREVA---KGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 324
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+VK+ G VLIHV+TEK + P
Sbjct: 325 YIGPVDGHNIDDLISILKEVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 384
Query: 183 KLQQTRLFCKI-----------------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q + K + MGGGTG+NLF FP RCFDVG
Sbjct: 385 TGKQFKGIAKTQSYTTYFAEALIAEAEANKDIVAIHAAMGGGTGMNLFLGRFPTRCFDVG 444
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 445 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 504
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNMVVM
Sbjct: 505 GPTHCGAFDVTFMACLPNMVVM 526
>gi|30315812|sp|O78328.1|DXS_CAPAN RecName: Full=Probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic; Short=1-deoxyxylulose-5-phosphate
synthase; Short=DXP synthase; Short=DXPS; AltName:
Full=CapTKT2; Flags: Precursor
gi|3559816|emb|CAA75778.1| transketolase 2 [Capsicum annuum]
Length = 719
Score = 333 bits (854), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 190/382 (49%), Positives = 228/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSST+ISAGL GMAVGRDL G+NN
Sbjct: 160 MSTLRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGL----------GMAVGRDLKGRNN 209
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +GA A +YEA+NNAG L+ A
Sbjct: 210 NVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPVPPVGALSSA 269
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 270 LSRLQSNRPLRELREVA---KGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 326
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+V++ G VLIHV+TEK + P
Sbjct: 327 YIGPVDGHNIDDLISILKEVRSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 386
Query: 183 KLQQTRLFCKI-----------------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q + K + MGGGTG+NLF + FP RCFDVG
Sbjct: 387 TGKQFKGSAKTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFLRRFPTRCFDVG 446
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 447 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 506
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNMVVM
Sbjct: 507 GPTHCGAFDVTFMACLPNMVVM 528
>gi|183206723|gb|ACC54554.1| putative 1-D-deoxyxylulose 5-phosphate synthase type 2 [Pinus
densiflora]
Length = 740
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 186/382 (48%), Positives = 232/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ +DAFG GHSSTSISAGL GMAVGRDLL K N
Sbjct: 179 MHTIRQTSGLAGFPKRDESKYDAFGAGHSSTSISAGL----------GMAVGRDLLKKKN 228
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HV++VI +GA A +YEA+NN+G L +A
Sbjct: 229 HVVAVIGDGAMTAGQAYEAMNNSGYLESNLIIILNDNKQVSLPTATLDGAAPPVGALTRA 288
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L S+ + R+L + A K ++ GG HE+ D ++R + + + + F++LGLY
Sbjct: 289 LTKLQSSKKLRKLREAA---KGLTKQIGGPTHEVASKVDKYARGLISPAGSSLFDELGLY 345
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+ED+ +L+++K++P G VLIH++TEK K P +
Sbjct: 346 YIGPVDGHNIEDMVTILEKIKSMPATGPVLIHLVTEKGKGYPPAEEAADKLHGVVKFDPV 405
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLN FQK FP RC DVG
Sbjct: 406 TGKQFKSKSSVLSYTQYFAEALIAEAEVDSKIVGIHAAMGGGTGLNFFQKKFPERCLDVG 465
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYS+FLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 466 IAEQHAVTFAAGLATEGLKPFCAIYSTFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 525
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCG+FD +MACLPNM+VM
Sbjct: 526 GPTHCGSFDVAYMACLPNMIVM 547
>gi|155369183|dbj|BAF75640.1| 1-deoxy-D-xylulose-5-phosphate synthase [Croton stellatopilosus]
Length = 720
Score = 333 bits (853), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 227/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRTIRQT GL E+ HD FG GHSST+ISAGL GMAVGRDL + N
Sbjct: 160 MRTIRQTNGLSGFTKRAESEHDCFGTGHSSTTISAGL----------GMAVGRDLKERKN 209
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 210 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 269
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GGQMHE +D ++R + + S + FE+LGLY
Sbjct: 270 LSRLQSNRPLRELREIA---KGVTKQIGGQMHELAAKVDEYARGMISASGSSLFEELGLY 326
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN+EDL +LK+VK+ G VLIHV+TEK + P
Sbjct: 327 YIGPVDGHNIEDLVDILKEVKSTKSTGPVLIHVVTEKGRGYPYAERAADKYHGVTKFDPA 386
Query: 183 KLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L MGGGTGLNLF + FP +CFDVG
Sbjct: 387 TGKQFKSGGSTQSYTTYFAEALIAEAEVDKDIVAIHAAMGGGTGLNLFHRRFPNKCFDVG 446
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGL+GAD
Sbjct: 447 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLIGAD 506
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMAC PNMVVM
Sbjct: 507 GPTHCGAFDVTFMACPPNMVVM 528
>gi|302815172|ref|XP_002989268.1| hypothetical protein SELMODRAFT_427859 [Selaginella moellendorffii]
gi|300143011|gb|EFJ09706.1| hypothetical protein SELMODRAFT_427859 [Selaginella moellendorffii]
Length = 728
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 230/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT G+ E+ +D FG GHSST+ISAGL GMAV RDL GK N
Sbjct: 168 MHTLRQTDGICGFTKRSESEYDPFGAGHSSTTISAGL----------GMAVARDLQGKKN 217
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +GA A +YEA+NNAG L+ A
Sbjct: 218 NVIAVIGDGAMTAGQAYEAMNNAGYLDTNLIVILNDNKQVSLPTATLDGPAPPVGALSSA 277
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL S+ + R+L + A K ++ GG MH+ +D ++R + +G+ A FFE+LGLY
Sbjct: 278 LSRLQSSKKLRELREVA---KGVTKQIGGHMHQLAAKVDEYARGMISGTGATFFEELGLY 334
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------ 179
YIGPVDGH ++DL +LK+VKA G VLIHV+TEK E+A
Sbjct: 335 YIGPVDGHRIDDLIAILKEVKAAETIGPVLIHVVTEKGRGYPYAERAADKYHGVVKFDPA 394
Query: 180 -------LPLKLQQTRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
P T F + L MGGGTGLN+FQK FP RCFDVG
Sbjct: 395 TGKQQKGKPATKAYTTYFAESLVAEAQKDESIVAIHAAMGGGTGLNIFQKQFPERCFDVG 454
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA+EG+KPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 455 IAEQHAVTFAAGLASEGIKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 514
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 515 GPTHCGAFDVTYMACLPNMVVM 536
>gi|350539507|ref|NP_001234672.1| 1-D-deoxyxylulose 5-phosphate synthase [Solanum lycopersicum]
gi|5059160|gb|AAD38941.1|AF143812_1 1-D-deoxyxylulose 5-phosphate synthase [Solanum lycopersicum]
Length = 719
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 188/382 (49%), Positives = 228/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSST+ISAGL GMAVGRDL G+NN
Sbjct: 160 MSTLRQTDGLAGFTKRSESEYDCFGTGHSSTTISAGL----------GMAVGRDLKGRNN 209
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +GA A +YEA+NNAG L+ A
Sbjct: 210 NVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPVAPVGALSSA 269
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 270 LSRLQSNRPLRELREVA---KGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 326
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+V++ G VLIHV+TEK + P
Sbjct: 327 YIGPVDGHNIDDLIAILKEVRSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 386
Query: 183 KLQQTRLFCKI-----------------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q + K + MGGGTG+NLF + FP RCFDVG
Sbjct: 387 TGKQFKASAKTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFHRRFPTRCFDVG 446
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EG+KPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 447 IAEQHAVTFAAGLACEGIKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 506
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 507 GPTHCGAFDVTYMACLPNMVVM 528
>gi|256619604|emb|CAZ66648.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 precursor [Solanum
lycopersicum]
Length = 719
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 188/382 (49%), Positives = 228/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSST+ISAGL GMAVGRDL G+NN
Sbjct: 160 MSTLRQTDGLAGFTKRSESEYDCFGTGHSSTTISAGL----------GMAVGRDLKGRNN 209
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +GA A +YEA+NNAG L+ A
Sbjct: 210 NVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPVAPVGALSSA 269
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 270 LSRLQSNRPLRELREVA---KGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 326
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+V++ G VLIHV+TEK + P
Sbjct: 327 YIGPVDGHNIDDLIAILKEVRSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 386
Query: 183 KLQQTRLFCKI-----------------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q + K + MGGGTG+NLF + FP RCFDVG
Sbjct: 387 TGKQFKASAKTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFHRRFPTRCFDVG 446
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EG+KPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 447 IAEQHAVTFAAGLACEGIKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 506
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 507 GPTHCGAFDVTYMACLPNMVVM 528
>gi|302764446|ref|XP_002965644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selaginella
moellendorffii]
gi|300166458|gb|EFJ33064.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selaginella
moellendorffii]
Length = 636
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 230/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT G+ E+ +D FG GHSST+ISAGL GMAV RDL GK N
Sbjct: 76 MHTLRQTDGICGFTKRSESEYDPFGAGHSSTTISAGL----------GMAVARDLQGKKN 125
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +GA A +YEA+NNAG L+ A
Sbjct: 126 NVIAVIGDGAMTAGQAYEAMNNAGYLDTNMIVILNDNKQVSLPTATLDGPAPPVGALSSA 185
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL S+ + R+L + A K ++ GG MH+ +D ++R + +G+ A FFE+LGLY
Sbjct: 186 LSRLQSSKKLRELREVA---KGVTKQIGGHMHQLAAKVDEYARGMISGTGATFFEELGLY 242
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------ 179
YIGPVDGH ++DL +LK+VKA G VLIHV+TEK E+A
Sbjct: 243 YIGPVDGHRIDDLITILKEVKAAETIGPVLIHVVTEKGHGYPYAERAADKYHGVVKFDPA 302
Query: 180 -------LPLKLQQTRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
P T F + L MGGGTGLN+FQK FP RCFDVG
Sbjct: 303 TGKQQKGKPATKAYTTYFAESLVAEAQKDESIVAIHAAMGGGTGLNIFQKQFPERCFDVG 362
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA+EG+KPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 363 IAEQHAVTFAAGLASEGIKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 422
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 423 GPTHCGAFDVTYMACLPNMVVM 444
>gi|124558735|gb|ABN13970.1| 1-deoxy-D-xylulose 5-phosphate synthase [Gossypium barbadense]
Length = 720
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 227/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSST+ISAGL GMAVGRDL G+ N
Sbjct: 158 MHTMRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGL----------GMAVGRDLKGERN 207
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HV++VI +GA A +YEA+NNAG L+ A
Sbjct: 208 HVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSA 267
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 268 LSRLQSNRPLRELREVA---KGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 324
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+VK G VLIHV+TEK + P
Sbjct: 325 YIGPVDGHNIDDLVSILKEVKTTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVVKFDPA 384
Query: 183 KLQQ----------TRLFCKI-------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + + MGGGTGLNLF + FP RCFDVG
Sbjct: 385 TGKQFKGNSATQSYTTYFAEALIAEAEADKNIVAIHAAMGGGTGLNLFLRRFPQRCFDVG 444
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 445 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 504
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNMVVM
Sbjct: 505 GPTHCGAFDVTFMACLPNMVVM 526
>gi|183206797|gb|ACC54557.1| putative 1-D-deoxyxylulose 5-phosphate synthase type 1 [Pinus
densiflora]
Length = 707
Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 191/378 (50%), Positives = 226/378 (59%), Gaps = 90/378 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSSTSISAGL GMA GRDL GKNN
Sbjct: 152 MPTLRQTNGLSGFTKRSESEYDCFGAGHSSTSISAGL----------GMAAGRDLKGKNN 201
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK---------------------------ALKRL 86
HVISVI +GA A ++EA+NNA L+ AL +L
Sbjct: 202 HVISVIGDGAMTAGQAFEAMNNARYLDSNMIVILNDNKQVSLPTANLDGPIPPVGALSKL 261
Query: 87 HSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGP 142
S+ R+L + A K ++ G MHE +D ++R + +GSR+ FE+LGLYYIGP
Sbjct: 262 QSSKPLRELREVA---KGVTKQLGAPMHELAAKVDEYARGMISGSRSTLFEELGLYYIGP 318
Query: 143 VDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PLKLQQ 186
VDGHN++DL +L+ VKA G VLIHV+TEK + P +Q
Sbjct: 319 VDGHNIDDLLTILRDVKATHTTGPVLIHVVTEKGRGYPYAERAADKYHGVVKFDPATGKQ 378
Query: 187 ----------TRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQ 223
T F + L + MGGGTGLN+F K FP RCFDVGIAEQ
Sbjct: 379 FKGKAPTQTYTTYFAEALISEAEADKNIVAVHAAMGGGTGLNMFSKRFPTRCFDVGIAEQ 438
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
HAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQ LPVRFA+DRAGLVGADGPTH
Sbjct: 439 HAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVIHDVDLQNLPVRFAMDRAGLVGADGPTH 498
Query: 284 CGAFDTTFMACLPNMVVM 301
CGAFD T++ACLPNMVVM
Sbjct: 499 CGAFDVTYLACLPNMVVM 516
>gi|168002605|ref|XP_001754004.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694980|gb|EDQ81326.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 725
Score = 330 bits (845), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 190/382 (49%), Positives = 227/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T+RQT GL E+ +D FG GHSSTSISAGL GMAVGRDL GK N
Sbjct: 166 MQTLRQTDGLSGFVKRAESEYDPFGAGHSSTSISAGL----------GMAVGRDLKGKKN 215
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VISVI +GA A +YEA+NNAG L+ A
Sbjct: 216 NVISVIGDGAMTAGQAYEAMNNAGYLDCNMIVILNDNKQVSLPTATLDGPAPPVGALSSA 275
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH----EIDAFSREIEAGSRACFFEDLGLY 138
L RL S+ R+L + A K ++FGG H ++D ++R + +GS + FE+LGLY
Sbjct: 276 LSRLQSSRPLRELREVA---KGVTKQFGGSAHILASKVDEYARGMISGSGSTLFEELGLY 332
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK----------------------- 175
YIGPVDGHNL+DL +L++VK G VLIH++TEK
Sbjct: 333 YIGPVDGHNLDDLVTILREVKNTSTTGPVLIHLVTEKGRGYPYAERAADKYHGVVKFDPA 392
Query: 176 ---EKAMLPLKLQQTRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+K + T F + L MGGGTG+N+F K FP RCFDVG
Sbjct: 393 TGKQKKVKTATQAYTTYFAEALIAEAELDKSIIGIHAAMGGGTGMNMFAKRFPERCFDVG 452
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFC+IYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 453 IAEQHAVTFAAGLACEGLKPFCSIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 512
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 513 GPTHCGAFDVTYMACLPNMVVM 534
>gi|356563764|ref|XP_003550129.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Glycine max]
Length = 712
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 226/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ D FG GHSST+ISAGL GMAVGRDL G+ N
Sbjct: 153 MHTMRQTNGLSGFTKRSESEFDCFGTGHSSTTISAGL----------GMAVGRDLKGRKN 202
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 203 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 262
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 263 LSRLQSNRPLRELREVA---KGVTKRIGGPMHELAAKVDEYARGMISGSGSSLFEELGLY 319
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM----------LP 181
YIGPVDGHN+ DL +L +VK+ G VLIHVITEK EKA P
Sbjct: 320 YIGPVDGHNINDLVAILNEVKSTNTTGPVLIHVITEKGRGYPYAEKAADKYHGVTKFDPP 379
Query: 182 LKLQ-----QTRLFCKI-----------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
Q TR + + MGGGTG+NLF + FP RCFDVG
Sbjct: 380 TGKQFKSKATTRSYTTYFAEALIAEAEADKDVVAIHAAMGGGTGMNLFHRRFPTRCFDVG 439
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 440 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 499
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCG+FD TFMACLPNMVVM
Sbjct: 500 GPTHCGSFDVTFMACLPNMVVM 521
>gi|301341852|gb|ADK73609.1| 1-D-deoxyxylulose 5-phosphate synthase [Solanum tuberosum]
Length = 719
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 189/382 (49%), Positives = 229/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSST+ISAGL GMAVGRDL G+NN
Sbjct: 160 MSTLRQTDGLAGFTKRSESEYDCFGTGHSSTTISAGL----------GMAVGRDLKGRNN 209
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +GA A +YEA+NNAG L+ A
Sbjct: 210 NVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPVAPVGALSSA 269
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 270 LSRLQSNRPLRELREVA---KGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 326
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPL 182
YIGPVDGHN++DL +LK+V++ G VLIHV+TEK E+A P
Sbjct: 327 YIGPVDGHNIDDLIAILKEVRSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 386
Query: 183 KLQQTRLFCKI-----------------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q + K + MGGGTG+NLF + FP RCFDVG
Sbjct: 387 TGKQFKANAKTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFHRRFPTRCFDVG 446
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQ AVTFAAGLA EG+KPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 447 IAEQRAVTFAAGLACEGIKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 506
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 507 GPTHCGAFDVTYMACLPNMVVM 528
>gi|35187002|gb|AAQ84169.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pueraria montana var.
lobata]
Length = 717
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/382 (50%), Positives = 229/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSST+ISAGL GMAVGRDL G+ N
Sbjct: 158 MHTMRQTNGLSGFTKRSESEYDCFGTGHSSTTISAGL----------GMAVGRDLKGRKN 207
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 208 NVVAVIGDGAMTAGQAYEALNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 267
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 268 LSRLQSNRPLRELREVA---KGVTKRIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 324
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPL 182
YIGPVDGHN++DL +L +VK+ G VLIHVITEK EKA P
Sbjct: 325 YIGPVDGHNIDDLVAILNEVKSTKTTGPVLIHVITEKGRGYPYAEKAADKYHGVTKFDPP 384
Query: 183 KLQQ----------TRLFCKI-------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + + MGGGTG+N+F + FP RCFDVG
Sbjct: 385 TGKQFKSKATTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNIFHRRFPTRCFDVG 444
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 445 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 504
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCG+FD TFMACLPNMVVM
Sbjct: 505 GPTHCGSFDVTFMACLPNMVVM 526
>gi|340764675|gb|AEK69519.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Alpinia officinarum]
Length = 711
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 189/382 (49%), Positives = 227/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR+T GL E+ HDAFGVGHSSTSISAGL GMAV RDL GK +
Sbjct: 153 MHTIRRTDGLAGFPKREESEHDAFGVGHSSTSISAGL----------GMAVARDLQGKKS 202
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVI+VI +GA A +YEA+NNAG L+KA
Sbjct: 203 HVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIVVLNDNRHGSLPTAALDEPATPVGALSKA 262
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L L S+P+ R L + A K ++ GGQ +E +D ++R + + S + FE+LGLY
Sbjct: 263 LTTLQSSPKLRMLREAA---KSLTKQIGGQTYELASKVDEYARGMISASGSTLFEELGLY 319
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGHN+EDL + +VKA+P PG VLIH++TEKEK P++
Sbjct: 320 YIGPVDGHNVEDLVTIFDKVKALPAPGPVLIHIVTEKEKEYPPIEAAADKMHGVMKIDPK 379
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D+R MG G GL+ FQ FP +CFDVG
Sbjct: 380 TGKQFKTKSPSLSYTQCFAESLIKEAEVDDRIVAVHAAMGSGIGLDYFQNKFPEKCFDVG 439
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAI+SSFLQR +DQV DVDLQKLPVRFA+D AGLVG D
Sbjct: 440 IAEQHAVTFAAGLATEGLKPFCAIHSSFLQRGYDQVVRDVDLQKLPVRFALDWAGLVGGD 499
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTH G FD +MACLPNMVVM
Sbjct: 500 GPTHSGVFDIAYMACLPNMVVM 521
>gi|193792541|gb|ACF21004.1| 1-deoxy-D-xylulose 5-phosphate synthase [Salvia miltiorrhiza]
Length = 714
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 193/382 (50%), Positives = 230/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQT GL E+ +D FG GHSST+ISAGL GMAVGRDL G+ +
Sbjct: 155 MPSLRQTGGLSGFTKRSESDYDCFGAGHSSTTISAGL----------GMAVGRDLKGRKD 204
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 205 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPTAPVGALSSA 264
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 265 LSRLQSNRPLRELREVA---KGVTKQIGGPMHELAAKVDEYARGLISGSGSTLFEELGLY 321
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPL 182
YIGPVDGHNL+DL + ++VK+ G VLIHV+TEK EKA P
Sbjct: 322 YIGPVDGHNLDDLTAIHREVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVTKFDPA 381
Query: 183 KLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L MGGGTGLNLFQ+ FP RCFDVG
Sbjct: 382 TGKQFKSSAPTQPYTTYFAEALIAEAEVDKDIVAIHAAMGGGTGLNLFQRRFPTRCFDVG 441
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EG+KPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 442 IAEQHAVTFAAGLACEGIKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 501
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNMVVM
Sbjct: 502 GPTHCGAFDVTFMACLPNMVVM 523
>gi|357478563|ref|XP_003609567.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
gi|355510622|gb|AES91764.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
Length = 717
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 189/382 (49%), Positives = 228/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSST+ISAGL GMAVGRDL G+ N
Sbjct: 158 MHTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAGL----------GMAVGRDLKGRKN 207
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
V++VI +GA A +YEA+NNAG L+ A
Sbjct: 208 DVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 267
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +G+ + FE+LGLY
Sbjct: 268 LSRLQSNKPLRELREVA---KGVTKRIGGPMHELAAKVDEYARGMISGTGSTLFEELGLY 324
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPL 182
YIGPVDGHN++DL +LK+VK G VLIHVITEK EKA P
Sbjct: 325 YIGPVDGHNIDDLVAILKEVKTTNSTGPVLIHVITEKGRGYPYAEKAADKYHGVAKFDPP 384
Query: 183 KLQQTRLFCKI-----------------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q ++ K + MGGGTG+N+F + FP RCFDVG
Sbjct: 385 TGKQFKVAAKTQSYTTYFAEALIAEAKADKDIIAIHAAMGGGTGMNIFHRRFPTRCFDVG 444
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVG+D
Sbjct: 445 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGSD 504
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTH G+FD TFMACLPNMVVM
Sbjct: 505 GPTHSGSFDVTFMACLPNMVVM 526
>gi|357478565|ref|XP_003609568.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
gi|355510623|gb|AES91765.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
Length = 672
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 189/382 (49%), Positives = 228/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSST+ISAGL GMAVGRDL G+ N
Sbjct: 113 MHTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAGL----------GMAVGRDLKGRKN 162
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
V++VI +GA A +YEA+NNAG L+ A
Sbjct: 163 DVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 222
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +G+ + FE+LGLY
Sbjct: 223 LSRLQSNKPLRELREVA---KGVTKRIGGPMHELAAKVDEYARGMISGTGSTLFEELGLY 279
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPL 182
YIGPVDGHN++DL +LK+VK G VLIHVITEK EKA P
Sbjct: 280 YIGPVDGHNIDDLVAILKEVKTTNSTGPVLIHVITEKGRGYPYAEKAADKYHGVAKFDPP 339
Query: 183 KLQQTRLFCKI-----------------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q ++ K + MGGGTG+N+F + FP RCFDVG
Sbjct: 340 TGKQFKVAAKTQSYTTYFAEALIAEAKADKDIIAIHAAMGGGTGMNIFHRRFPTRCFDVG 399
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVG+D
Sbjct: 400 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGSD 459
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTH G+FD TFMACLPNMVVM
Sbjct: 460 GPTHSGSFDVTFMACLPNMVVM 481
>gi|351725475|ref|NP_001236070.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Glycine max]
gi|226536911|gb|ACO72582.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Glycine max]
Length = 708
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 228/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ D FG GHSST+ISAGL GMAVGRDL G+ N
Sbjct: 149 MHTMRQTNGLSGFTKRSESEFDCFGTGHSSTTISAGL----------GMAVGRDLKGRKN 198
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 199 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 258
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 259 LSRLQSNRPLRELREVA---KGVTKRIGGPMHELAAKVDEYARGMISGSGSSLFEELGLY 315
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPL 182
YIGPVDGHN++DL +L +VK+ G VLIHVITEK EKA P
Sbjct: 316 YIGPVDGHNIDDLVAILNEVKSTKTTGPVLIHVITEKGRGYPYAEKAADKYHGVTKFDPP 375
Query: 183 KLQQ----------TRLFCKI-------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + + MGGGTG+NLF + FP RCFDVG
Sbjct: 376 TGKQFKSKATTQSYTTYFAEALIAEAEADKDVVAIHAAMGGGTGMNLFHRRFPTRCFDVG 435
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 436 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 495
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCG+FD TFMACLPNMVVM
Sbjct: 496 GPTHCGSFDVTFMACLPNMVVM 517
>gi|408537471|gb|AFU75321.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Aquilaria sinensis]
Length = 717
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 194/382 (50%), Positives = 227/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSST+ISAGL GMAVGRDL GK N
Sbjct: 158 MHTMRQTNGLSGFTKRSESEYDCFGTGHSSTTISAGL----------GMAVGRDLKGKRN 207
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 208 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSSA 267
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ G MHE +D ++R + +GS + FE+LGLY
Sbjct: 268 LSRLQSNRPLRELREVA---KGVTKQLPGPMHELAAKVDEYARGMISGSGSTLFEELGLY 324
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA------------- 178
YIGPVDGHN++DL +LK+VK+ G VLIHV+TEK EKA
Sbjct: 325 YIGPVDGHNVDDLVAILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVVKFDPA 384
Query: 179 ----MLPLKLQQ--TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+ P Q T F + L MGGGTGLN F FP RCFDVG
Sbjct: 385 TGKQLKPSAKTQSYTTYFAEALIAEAEVDQDIVAIHAAMGGGTGLNHFLHRFPARCFDVG 444
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 445 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 504
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNMVVM
Sbjct: 505 GPTHCGAFDVTFMACLPNMVVM 526
>gi|374669414|gb|AEZ55865.1| chloroplast 1-deoxy-D-xylulose 5-phosphate synthase 1 [Mitragyna
speciosa]
Length = 669
Score = 327 bits (838), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 191/382 (50%), Positives = 226/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSSTSISAGL GMAVGRDL G+ N
Sbjct: 158 MPTLRQTDGLSGFTKRSESEYDCFGAGHSSTSISAGL----------GMAVGRDLKGRKN 207
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HV++VI +GA A +YEA+NNAG L+ A
Sbjct: 208 HVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSA 267
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG +HE +D ++R + +GS + FE+LG Y
Sbjct: 268 LSRLQSNRPLRELREVA---KGVTKQIGGSVHELAAKVDEYARGLISGSGSTLFEELGFY 324
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPL 182
YIGPVDGH+++DL +LK+VK+ G VLIHV+TEK EKA P
Sbjct: 325 YIGPVDGHSIDDLVAILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVVKFDPA 384
Query: 183 KLQQTRLFCKI-----------------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q + K + MGGGTGLNLF FP RCFDVG
Sbjct: 385 TGKQFKSSGKTQSYTTYFAEALVAEAEADKDVVAIHAAMGGGTGLNLFLHRFPTRCFDVG 444
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 445 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 504
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD FMACLPNMVVM
Sbjct: 505 GPTHCGAFDVAFMACLPNMVVM 526
>gi|21322713|emb|CAD22530.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Medicago truncatula]
Length = 717
Score = 327 bits (838), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 186/382 (48%), Positives = 226/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSST+ISAGL GMAVGRDL G+ N
Sbjct: 158 MHTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAGL----------GMAVGRDLKGRKN 207
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
V++VI +GA A +YEA+NNAG L+ A
Sbjct: 208 DVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 267
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +G+ + FE+LGLY
Sbjct: 268 LSRLQSNKPLRELREVA---KGVTKRIGGPMHELAAKVDEYARGMISGTGSTLFEELGLY 324
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+VK G VLIHVITEK + P
Sbjct: 325 YIGPVDGHNIDDLVAILKEVKTTNSTGPVLIHVITEKGRGYPYAQKAADKYHGVAKFDPP 384
Query: 183 KLQQTRLFCKI-----------------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q ++ K + MGGGTG+N+F + FP RCFDVG
Sbjct: 385 TGKQFKVAAKTQSYTTYFAEALIAEAKADKDIIAIHAAMGGGTGMNIFHRRFPTRCFDVG 444
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVG+D
Sbjct: 445 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGSD 504
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTH G+FD TFMACLPNMVVM
Sbjct: 505 GPTHSGSFDVTFMACLPNMVVM 526
>gi|218196788|gb|EEC79215.1| hypothetical protein OsI_19939 [Oryza sativa Indica Group]
Length = 720
Score = 327 bits (838), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 191/382 (50%), Positives = 230/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSST+ISA L GMAVGRDL G N
Sbjct: 157 MPTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAAL----------GMAVGRDLKGGKN 206
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 207 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSSA 266
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L S+ R+L + A K ++ GG +HE +D ++R + +GS + FE+LGLY
Sbjct: 267 LSKLQSSRPLRELREVA---KGVTKQIGGSVHELAAKVDEYARGMISGSGSTLFEELGLY 323
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------ 179
YIGPVDGHN++DL +L++VK+ G VLIHV+TEK E+A
Sbjct: 324 YIGPVDGHNIDDLITILREVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 383
Query: 180 -------LPLKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L L T F + L DNR MGGGTGLN F + FP RCFDVG
Sbjct: 384 TGKQFKSLAKTLSYTNYFAEALIAEAEQDNRVVAIHAAMGGGTGLNYFLRRFPNRCFDVG 443
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 444 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 503
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 504 GPTHCGAFDVTYMACLPNMVVM 525
>gi|8000868|gb|AAD56390.2|AF182286_1 1-deoxy-D-xylulose-5-phosphate synthase [Artemisia annua]
Length = 713
Score = 327 bits (837), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 191/382 (50%), Positives = 226/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ HD FG GHSST+ISAGL GMAVGRDL G N
Sbjct: 154 MHTIRQTNGLAGFTKRSESEHDCFGTGHSSTTISAGL----------GMAVGRDLKGGTN 203
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
V+++I +GA A +YEA+NNAG L+ A
Sbjct: 204 DVVAIIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSA 263
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K+ ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 264 LSRLQSNRPLRELREVA---KEVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 320
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKE---------------------- 176
YIGPVDGH+++DL +LK+VK+ G VLIHVITEK
Sbjct: 321 YIGPVDGHSIDDLVAILKEVKSTKTTGPVLIHVITEKGRGYPYAEKAADKYHGVGKFDPA 380
Query: 177 -----KAMLPLKLQQTRLFC----------KI--LDNRMGGGTGLNLFQKHFPIRCFDVG 219
K+ P + T KI + MGGGTG+NLF + FP RCFDVG
Sbjct: 381 TGKQFKSSAPTQSYTTYFAEALIAEAEADKKIVGIHAAMGGGTGMNLFLRRFPTRCFDVG 440
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 441 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 500
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTH G+FD TFMACLPNMVVM
Sbjct: 501 GPTHSGSFDVTFMACLPNMVVM 522
>gi|237625980|gb|ACR02668.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Amomum
villosum]
Length = 715
Score = 327 bits (837), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 193/382 (50%), Positives = 227/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T+RQT GL E+ +DAFG GHSSTSISA L GMAVGRDL+G+ N
Sbjct: 156 MQTLRQTDGLSGFTKRSESDYDAFGAGHSSTSISAAL----------GMAVGRDLMGRKN 205
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +G+ A +YEA+NNAG L+ A
Sbjct: 206 NVIAVIGDGSMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSA 265
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L RL S+ R+L + A K +K GG MHEI D ++R + +GS + FE+LGLY
Sbjct: 266 LSRLQSSKPLRELREVA---KGVTKKIGGSMHEIAAKVDEYARGMISGSGSTLFEELGLY 322
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPL 182
YIGPVDGHN++DL +LK+VK+ G VLIHV+TEK EKA P
Sbjct: 323 YIGPVDGHNIDDLVTILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVTKFDPA 382
Query: 183 KLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F L MGGGTGLN F + FP RCFDVG
Sbjct: 383 TGKQFKSSSQTKSYTNYFADALVAEAEVDKDIVAIHAAMGGGTGLNYFLRKFPDRCFDVG 442
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGL EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 443 IAEQHAVTFAAGLTCEGLKPFCAIYSSFLQRAYDQVIHDVDLQKLPVRFALDRAGLVGAD 502
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTH GAFD +MACLPNMVVM
Sbjct: 503 GPTHSGAFDVAYMACLPNMVVM 524
>gi|408833344|gb|AFU93068.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Eucommia
ulmoides]
Length = 712
Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 227/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ +D FG GHSST+ISAGL GMAVGRDL + N
Sbjct: 153 MHTIRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGL----------GMAVGRDLKRRKN 202
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V+SVI +GA A +YEA+NNAG L+ A
Sbjct: 203 NVVSVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSA 262
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ G MH+ +D ++R + +GS + FE+LGLY
Sbjct: 263 LSRLQSNRPLRELREVA---KGVTKQIGWPMHDLASKVDEYARGLISGSGSTLFEELGLY 319
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPL 182
YIGPVDGH+++DL +LK+VK+ G VLIHV+TEK EKA P
Sbjct: 320 YIGPVDGHSIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAEKAADKYHGVVKFDPA 379
Query: 183 KLQQTRLFCKI-----------------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
QQ + K + MGGGTGLNLF + FP RCFDVG
Sbjct: 380 TGQQFKASVKTQSFTTYFAEALIAEAEADKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVG 439
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 440 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 499
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNMVVM
Sbjct: 500 GPTHCGAFDVTFMACLPNMVVM 521
>gi|115463849|ref|NP_001055524.1| Os05g0408900 [Oryza sativa Japonica Group]
gi|90110016|sp|O22567.2|DXS1_ORYSJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1,
chloroplastic; Short=1-deoxyxylulose-5-phosphate
synthase; Short=DXP synthase; Short=DXPS; Flags:
Precursor
gi|49328155|gb|AAT58851.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Oryza sativa
Japonica Group]
gi|113579075|dbj|BAF17438.1| Os05g0408900 [Oryza sativa Japonica Group]
gi|215694297|dbj|BAG89290.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740838|dbj|BAG96994.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631568|gb|EEE63700.1| hypothetical protein OsJ_18518 [Oryza sativa Japonica Group]
Length = 720
Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 231/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSST+ISA L GMAVGRDL G N
Sbjct: 157 MPTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAAL----------GMAVGRDLKGGKN 206
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 207 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSSA 266
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L S+ R+L + A K ++ GG +HE +D ++R + +GS + FE+LGLY
Sbjct: 267 LSKLQSSRPLRELREVA---KGVTKQIGGSVHELAAKVDEYARGMISGSGSTLFEELGLY 323
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------ 179
YIGPVDGHN++DL +L++VK+ G VLIHV+TEK E+A
Sbjct: 324 YIGPVDGHNIDDLITILREVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 383
Query: 180 ------LPLK-LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
P K L T F + L DNR MGGGTGLN F + FP RCFDVG
Sbjct: 384 TGKQFKSPAKTLSYTNYFAEALIAEAEQDNRVVAIHAAMGGGTGLNYFLRRFPNRCFDVG 443
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 444 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 503
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 504 GPTHCGAFDVTYMACLPNMVVM 525
>gi|326491509|dbj|BAJ94232.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510627|dbj|BAJ87530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 712
Score = 326 bits (836), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 193/382 (50%), Positives = 231/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSST+ISA L GMAVGRDL G N
Sbjct: 149 MPTMRQTNGLSGFIKRSESEYDSFGTGHSSTTISAAL----------GMAVGRDLKGAKN 198
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK-------------------------------A 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 199 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSGA 258
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L S+ R+L + A K ++ GG +HEI D ++R + +GS + FE+LGLY
Sbjct: 259 LSKLQSSRPLRELREVA---KGVTKQIGGSVHEIAAKVDEYARGMISGSGSSLFEELGLY 315
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------ 179
YIGPVDGHN++DL +L++VK G VLIHVITEK E+A
Sbjct: 316 YIGPVDGHNIDDLITILREVKGTKTTGPVLIHVITEKGRGYPYAERASDKYHGVAKFDPA 375
Query: 180 ------LPLK-LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
+P K L T F + L D++ MGGGTGLN F + FP RCFDVG
Sbjct: 376 TGKQFKVPAKTLSYTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPNRCFDVG 435
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 436 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 495
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNMVVM
Sbjct: 496 GPTHCGAFDVTFMACLPNMVVM 517
>gi|2612941|gb|AAB88295.1| CLA1 transketolase-like protein [Oryza sativa]
Length = 594
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 231/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSST+ISA L GMAVGRDL G N
Sbjct: 81 MPTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAAL----------GMAVGRDLKGGKN 130
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 131 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSSA 190
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L S+ R+L + A K ++ GG +HE +D ++R + +GS + FE+LGLY
Sbjct: 191 LSKLQSSRPLRELREVA---KGVTKQIGGSVHELAAKVDEYARGMISGSGSTLFEELGLY 247
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------ 179
YIGPVDGHN++DL +L++VK+ G VLIHV+TEK E+A
Sbjct: 248 YIGPVDGHNIDDLITILREVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 307
Query: 180 ------LPLK-LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
P K L T F + L DNR MGGGTGLN F + FP RCFDVG
Sbjct: 308 TGKQFKSPAKTLSYTNYFAEALIAEAEQDNRVVAIHAAMGGGTGLNYFLRRFPNRCFDVG 367
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 368 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 427
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 428 GPTHCGAFDVTYMACLPNMVVM 449
>gi|168015770|ref|XP_001760423.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688437|gb|EDQ74814.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 736
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/382 (48%), Positives = 227/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRT+RQT G+ E+ +D FG GHSSTSISAGL GMAVGRDL G+ N
Sbjct: 172 MRTLRQTAGISGFVKRAESEYDPFGAGHSSTSISAGL----------GMAVGRDLKGRTN 221
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +GA A +YEA+NNAG L+ A
Sbjct: 222 NVIAVIGDGAMTAGQAYEAMNNAGYLDCNMIVILNDNKQVSLPTATLDGPAPPVGALSSA 281
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH----EIDAFSREIEAGSRACFFEDLGLY 138
L +L S+ R+L + A K ++ GG H ++D ++R + +GS + FE+LGLY
Sbjct: 282 LSKLQSSRPLRELREVA---KGVTKQLGGSAHVLAAKVDEYARGMISGSGSTLFEELGLY 338
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPV+GHNLEDL +L++VK G VLIH++TEK + P
Sbjct: 339 YIGPVNGHNLEDLVTILREVKNTATTGPVLIHLVTEKGRGYPYAERAADKYHGVVKFDPA 398
Query: 183 KLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L MGGGTG+N+F K FP RCFDVG
Sbjct: 399 TGKQHKVKTATQAYTTYFAEALIAEAELDKSIVGIHAAMGGGTGMNMFAKRFPERCFDVG 458
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGL+PFC+IYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 459 IAEQHAVTFAAGLACEGLRPFCSIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 518
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 519 GPTHCGAFDVTYMACLPNMVVM 540
>gi|46488696|gb|AAS99588.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Elaeis
guineensis]
Length = 707
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/382 (49%), Positives = 227/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSSTSISA L GMAVGRDL G+ N
Sbjct: 148 MPTLRQTNGLSGFTKRSESEYDSFGAGHSSTSISAAL----------GMAVGRDLKGRKN 197
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +GA A +YEA+NNAG L+ A
Sbjct: 198 NVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSA 257
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL S+ R+L + A K ++ GG MH+ +D ++R + +GS + FE+LGLY
Sbjct: 258 LSRLQSSRPLRELREVA---KGVTKQIGGSMHKLAAKVDEYARGMISGSGSTLFEELGLY 314
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+VK+ G V IHV+TEK + P
Sbjct: 315 YIGPVDGHNMDDLVTILKEVKSTKTTGPVFIHVVTEKGRGYPYAERAADKYHGVAKFDPS 374
Query: 183 KLQQ----------TRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L + MGGGTGLN F + FP RCFDVG
Sbjct: 375 TGKQFKSRSKTQSYTNYFAEALISEAEVDKDIVAIHAAMGGGTGLNYFLRRFPTRCFDVG 434
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 435 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 494
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCG+FD T+MACLPNMVVM
Sbjct: 495 GPTHCGSFDVTYMACLPNMVVM 516
>gi|168007322|ref|XP_001756357.1| 1-deoxyxylulose 5-phosphate synthase [Physcomitrella patens subsp.
patens]
gi|162692396|gb|EDQ78753.1| 1-deoxyxylulose 5-phosphate synthase [Physcomitrella patens subsp.
patens]
Length = 729
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/382 (49%), Positives = 228/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +DAFG GHSSTSISAGL GMAVGRDL GK N
Sbjct: 170 MHTLRQTDGLSGFVKRAESEYDAFGAGHSSTSISAGL----------GMAVGRDLKGKKN 219
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +GA A +YEA+NNAG L+ A
Sbjct: 220 NVIAVIGDGAMTAGQAYEAMNNAGYLDCNMIVILNDNKQVSLPTATLDGPAPPVGALSSA 279
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH----EIDAFSREIEAGSRACFFEDLGLY 138
L RL S+ R+L + A K ++ GG H ++D ++R + +GS + FE+LGLY
Sbjct: 280 LSRLQSSRPLRELREVA---KGVTKQLGGPAHVLASKVDEYARGMISGSGSTLFEELGLY 336
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +L++VK G VLIH++TEK + P
Sbjct: 337 YIGPVDGHNMDDLVTILREVKNTSTTGPVLIHLVTEKGRGYPYAERAADKYHGVVKFDPA 396
Query: 183 KLQQTRL----------FCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q ++ F + L MGGGTG+N+F K FP RCFDVG
Sbjct: 397 TGKQNKVKAPTQAYTTYFAEALIAEAEVDKDVVGIHAAMGGGTGMNIFAKRFPERCFDVG 456
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFC+IYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 457 IAEQHAVTFAAGLACEGLKPFCSIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 516
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 517 GPTHCGAFDVTYMACLPNMVVM 538
>gi|168038235|ref|XP_001771607.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677163|gb|EDQ63637.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/382 (49%), Positives = 228/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +DAFG GHSSTSISAGL GMAVGRDL GK N
Sbjct: 118 MHTLRQTDGLSGFVKRAESEYDAFGAGHSSTSISAGL----------GMAVGRDLKGKKN 167
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +GA A +YEA+NNAG L+ A
Sbjct: 168 NVIAVIGDGAMTAGQAYEAMNNAGYLDCNMIVILNDNKQVSLPTATLDGPAPPVGALSSA 227
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH----EIDAFSREIEAGSRACFFEDLGLY 138
L RL S+ R+L + A K ++ GG H ++D ++R + +GS + FE+LGLY
Sbjct: 228 LSRLQSSRPLRELREVA---KGVTKQLGGPAHVLASKVDEYARGMISGSGSTLFEELGLY 284
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +L++VK G VLIH++TEK + P
Sbjct: 285 YIGPVDGHNMDDLVTILREVKNTSTTGPVLIHLVTEKGRGYPYAERAADKYHGVVKFDPA 344
Query: 183 KLQQTRL----------FCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q ++ F + L MGGGTG+N+F K FP RCFDVG
Sbjct: 345 TGKQNKVKAATQAYTTYFAEALIAEAEVDKDIIGIHAAMGGGTGMNMFAKRFPERCFDVG 404
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFC+IYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 405 IAEQHAVTFAAGLACEGLKPFCSIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 464
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 465 GPTHCGAFDVTYMACLPNMVVM 486
>gi|357133711|ref|XP_003568467.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Brachypodium distachyon]
Length = 706
Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 191/382 (50%), Positives = 230/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSST+ISA L GMAVGRDL G N
Sbjct: 143 MPTMRQTNGLSGFVKRSESEYDSFGTGHSSTTISAAL----------GMAVGRDLKGAKN 192
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK-------------------------------A 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 193 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSGA 252
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L S+ R+L + A K ++ GG +HE +D ++R + +GS + FE+LGLY
Sbjct: 253 LSKLQSSRPLRELREVA---KGVTKQIGGSVHELAAKVDEYARGMISGSGSSLFEELGLY 309
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------ 179
YIGPVDGHN++DL +L++VK G VLIHV+TEK E+A
Sbjct: 310 YIGPVDGHNIDDLITILREVKGTKTTGPVLIHVVTEKGRGYPYAERASDKYHGVAKFDPA 369
Query: 180 ------LPLK-LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
P K L T F + L D++ MGGGTGLN F + FP RCFDVG
Sbjct: 370 TGKQFKSPAKTLSYTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPNRCFDVG 429
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 430 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 489
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNMVVM
Sbjct: 490 GPTHCGAFDVTFMACLPNMVVM 511
>gi|356546474|ref|XP_003541651.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Glycine max]
Length = 721
Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 189/382 (49%), Positives = 228/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSST+ISAGL GMAVGRDL G N
Sbjct: 162 MHTMRQTDGLAGFTKRSESDYDCFGTGHSSTTISAGL----------GMAVGRDLKGDKN 211
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 212 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSA 271
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 272 LSKLQSNRPLRELREVA---KGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 328
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPL 182
YIGPVDGHN++DL +L +VK+ G VL+HV+TEK E+A P
Sbjct: 329 YIGPVDGHNIDDLVSILNEVKSTKTTGPVLLHVVTEKGHGYPYAERAADKYHGVTKFDPA 388
Query: 183 KLQQ----------TRLFCKI-------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + + MGGGTG+NLF + FP RCFDVG
Sbjct: 389 TGKQFKSNAATQSYTTYFAEALIAEAEADKDIVGIHAAMGGGTGMNLFLRRFPTRCFDVG 448
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 449 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 508
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNMVVM
Sbjct: 509 GPTHCGAFDVTFMACLPNMVVM 530
>gi|340764673|gb|AEK69518.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase 1 [Alpinia
officinarum]
Length = 715
Score = 323 bits (828), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 191/382 (50%), Positives = 226/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T+RQT GL E+ +DAFG GHSSTSISA L GMAVGRDL+G+ N
Sbjct: 156 MQTLRQTDGLSGFTKRSESDYDAFGAGHSSTSISAAL----------GMAVGRDLMGRKN 205
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +GA A +YEA+NNAG L+
Sbjct: 206 NVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSST 265
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L RL S+ R+L + A K ++ GG MHEI D ++R + +GS + FE+LGLY
Sbjct: 266 LSRLQSSKPLRELREVA---KGMTKRIGGSMHEIAAKVDEYARGMISGSGSTLFEELGLY 322
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPL 182
YIGPVDGHN++DL +LK+VK+ G VLIHV+TEK E+A P
Sbjct: 323 YIGPVDGHNIDDLVTILKEVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVTRFDPA 382
Query: 183 KLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F L MGGGTGLN F + FP RCFDVG
Sbjct: 383 TGKQFKSSSQTKSYTNYFADALVAEAEVDKDIVAIHAAMGGGTGLNHFLRKFPDRCFDVG 442
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGL EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 443 IAEQHAVTFAAGLTCEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFALDRAGLVGAD 502
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTH GAFD +MACLPNMVVM
Sbjct: 503 GPTHSGAFDVAYMACLPNMVVM 524
>gi|374639399|gb|AEZ55688.1| putative 1-deoxy-D-xylulose 5-phosphate synthase of [Salvia
miltiorrhiza]
Length = 703
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 190/379 (50%), Positives = 222/379 (58%), Gaps = 97/379 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSST+ISAGL GMAVGRDL G+ N
Sbjct: 149 MPTLRQTDGLSGFTKRSESDYDCFGAGHSSTTISAGL----------GMAVGRDLKGRKN 198
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HV++VI +GA A +YEA+NNAG L++A
Sbjct: 199 HVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSRA 258
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEIDA-FSREIEAGSRACFFEDLGLYYIG 141
L RL SN R+L + +SK GG MHE+ A R + +GS + FE+LGLYYIG
Sbjct: 259 LSRLQSNRPLRELGE---ASK------GGSMHELAAKHGRGLMSGSGSTLFEELGLYYIG 309
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PLKLQ 185
PVDGHN+ DL +L +VK G VLIHV+TEK K P +
Sbjct: 310 PVDGHNIHDLTTILARVKNTKITGPVLIHVVTEKGKGYPYAERAADKYHGVSKFDPATGK 369
Query: 186 Q----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAE 222
Q T F + L MGGGTGL+LF FP RCFDVGIAE
Sbjct: 370 QFKANARTQSYTTCFARALIAEAEADEDVVAIHAAMGGGTGLDLFNHRFPTRCFDVGIAE 429
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAGLA EG+KPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGADGPT
Sbjct: 430 QHAVTFAAGLACEGIKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPT 489
Query: 283 HCGAFDTTFMACLPNMVVM 301
HCGAFD +FMACLPNMVVM
Sbjct: 490 HCGAFDVSFMACLPNMVVM 508
>gi|194701502|gb|ACF84835.1| unknown [Zea mays]
Length = 564
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 188/382 (49%), Positives = 227/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSST+ISA L GMAVGRDL G N
Sbjct: 1 MPTMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAAL----------GMAVGRDLKGGKN 50
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 51 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSA 110
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L S+ R+L + A K ++ GG +HE +D ++R + +G + FE+LGLY
Sbjct: 111 LSKLQSSRPLRELREVA---KGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLY 167
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------ 179
YIGPVDGHN++DL +L VK+ G VLIHV+TEK E+A
Sbjct: 168 YIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 227
Query: 180 ------LPLK-LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
P K L T F + L D++ MGGGTGLN F + FP RCFDVG
Sbjct: 228 TGKQFKSPAKTLSYTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPSRCFDVG 287
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 288 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 347
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD +MACLPNMVVM
Sbjct: 348 GPTHCGAFDVAYMACLPNMVVM 369
>gi|413945326|gb|AFW77975.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Zea mays]
Length = 719
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 188/382 (49%), Positives = 227/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSST+ISA L GMAVGRDL G N
Sbjct: 156 MPTMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAAL----------GMAVGRDLKGGKN 205
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 206 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSA 265
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L S+ R+L + A K ++ GG +HE +D ++R + +G + FE+LGLY
Sbjct: 266 LSKLQSSRPLRELREVA---KGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLY 322
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------ 179
YIGPVDGHN++DL +L VK+ G VLIHV+TEK E+A
Sbjct: 323 YIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 382
Query: 180 ------LPLK-LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
P K L T F + L D++ MGGGTGLN F + FP RCFDVG
Sbjct: 383 TGKQFKSPAKTLSYTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPSRCFDVG 442
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 443 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 502
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD +MACLPNMVVM
Sbjct: 503 GPTHCGAFDVAYMACLPNMVVM 524
>gi|145652152|gb|ABP88134.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
Length = 719
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 188/382 (49%), Positives = 227/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSST+ISA L GMAVGRDL G N
Sbjct: 156 MPTMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAAL----------GMAVGRDLKGGKN 205
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 206 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSA 265
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L S+ R+L + A K ++ GG +HE +D ++R + +G + FE+LGLY
Sbjct: 266 LSKLQSSRPLRELREVA---KGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLY 322
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------ 179
YIGPVDGHN++DL +L VK+ G VLIHV+TEK E+A
Sbjct: 323 YIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 382
Query: 180 ------LPLK-LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
P K L T F + L D++ MGGGTGLN F + FP RCFDVG
Sbjct: 383 TGKQFKSPAKTLSYTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPSRCFDVG 442
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 443 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 502
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD +MACLPNMVVM
Sbjct: 503 GPTHCGAFDVAYMACLPNMVVM 524
>gi|195612150|gb|ACG27905.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zea mays]
Length = 719
Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 188/382 (49%), Positives = 227/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSST+ISA L GMAVGRDL G N
Sbjct: 156 MPTMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAAL----------GMAVGRDLKGGKN 205
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 206 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSA 265
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L S+ R+L + A K ++ GG +HE +D ++R + +G + FE+LGLY
Sbjct: 266 LSKLQSSRPLRELREVA---KGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLY 322
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------ 179
YIGPVDGHN++DL +L VK+ G VLIHV+TEK E+A
Sbjct: 323 YIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 382
Query: 180 ------LPLK-LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
P K L T F + L D++ MGGGTGLN F + FP RCFDVG
Sbjct: 383 TGKQFKSPAKTLSYTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPNRCFDVG 442
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 443 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 502
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD +MACLPNMVVM
Sbjct: 503 GPTHCGAFDVAYMACLPNMVVM 524
>gi|256355109|ref|NP_001157805.1| deoxy xylulose synthase 1 [Zea mays]
gi|253558917|gb|ACT32136.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
Length = 719
Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 188/382 (49%), Positives = 227/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSST+ISA L GMAVGRDL G N
Sbjct: 156 MPTMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAAL----------GMAVGRDLKGGKN 205
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 206 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSA 265
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L S+ R+L + A K ++ GG +HE +D ++R + +G + FE+LGLY
Sbjct: 266 LSKLQSSRPLRELREVA---KGVTRQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLY 322
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------ 179
YIGPVDGHN++DL +L VK+ G VLIHV+TEK E+A
Sbjct: 323 YIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 382
Query: 180 ------LPLK-LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
P K L T F + L D++ MGGGTGLN F + FP RCFDVG
Sbjct: 383 TGKQFKSPAKTLSYTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPNRCFDVG 442
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 443 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 502
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD +MACLPNMVVM
Sbjct: 503 GPTHCGAFDVAYMACLPNMVVM 524
>gi|242090511|ref|XP_002441088.1| hypothetical protein SORBIDRAFT_09g020140 [Sorghum bicolor]
gi|241946373|gb|EES19518.1| hypothetical protein SORBIDRAFT_09g020140 [Sorghum bicolor]
Length = 722
Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 188/382 (49%), Positives = 227/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSST+ISA L GMAVGRDL G N
Sbjct: 159 MPTMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAAL----------GMAVGRDLKGGKN 208
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 209 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSA 268
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L S+ R+L + A K ++ GG +HE +D ++R + +G + FE+LGLY
Sbjct: 269 LSKLQSSRPLRELREVA---KGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLY 325
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------ 179
YIGPVDGHN++DL +L VK+ G VLIHV+TEK E+A
Sbjct: 326 YIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 385
Query: 180 ------LPLK-LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
P K L T F + L D++ MGGGTGLN F + FP RCFDVG
Sbjct: 386 TGKQFKSPAKTLSYTNYFAESLIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPSRCFDVG 445
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 446 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 505
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD +MACLPNMVVM
Sbjct: 506 GPTHCGAFDVAYMACLPNMVVM 527
>gi|46361691|gb|AAS89341.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ginkgo biloba]
Length = 717
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 190/384 (49%), Positives = 227/384 (59%), Gaps = 96/384 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSSTSISAGL GMAVGRDL G+NN
Sbjct: 156 MPTLRQTNGLSGFTKRSESEYDSFGAGHSSTSISAGL----------GMAVGRDLKGRNN 205
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NNAG L+ A
Sbjct: 206 HVISVIGDGAMTAGQAYEAMNNAGYLDSNMIVILNDNKQVSLPTANLDGPIPPVGALSSA 265
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL S+ R+L + A K ++ GG MHE +D ++R + +GSR+ FE++GLY
Sbjct: 266 LSRLQSSRPLRELREVA---KGVTKQLGGSMHELAAKVDEYARGMISGSRSTLFEEMGLY 322
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +L++VKA G VLIHV+TEK + P
Sbjct: 323 YIGPVDGHNIDDLVTILREVKATHTTGPVLIHVVTEKGRGYPYAERAADKYHGVVKFDPA 382
Query: 183 KLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L MGGGTGLN+F K FP RCFDVG
Sbjct: 383 TGKQFKGKAQTQSYTTYFAEALIAEAEVDKNIVAIHAAMGGGTGLNMFLKRFPSRCFDVG 442
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCF--DQVAHDVDLQKLPVRFAIDRAGLVG 277
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR + DVDLQKLPVRFA+DRAGLVG
Sbjct: 443 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDVDLQKLPVRFAMDRAGLVG 502
Query: 278 ADGPTHCGAFDTTFMACLPNMVVM 301
ADGPTHCGAFD T+++CLPNMVVM
Sbjct: 503 ADGPTHCGAFDVTYLSCLPNMVVM 526
>gi|357517201|ref|XP_003628889.1| 1-Deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
gi|355522911|gb|AET03365.1| 1-Deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
Length = 521
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/334 (51%), Positives = 209/334 (62%), Gaps = 77/334 (23%)
Query: 42 MAVGRDLLGKNNHVISVIVEGATIARMSYEAINNAG------------------------ 77
MAV RDLLGK N VISVI +GA A +YEA+NNAG
Sbjct: 1 MAVARDLLGKKNSVISVIGDGAMTAGQAYEAMNNAGFIDSNLIVILNDNKQVSLPTATLD 60
Query: 78 -------VLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH----EIDAFSREIEAG 126
L+ L ++ ++ +FR+L + ++K+ ++ GGQ H ++D ++R+ +G
Sbjct: 61 GPATPVGALSSTLSKIQASRKFRKLRE---ATKNITKQIGGQTHLVASKVDKYARDFISG 117
Query: 127 SRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPL---- 182
S + FE+LG+YYIGP+DGHN+EDL + ++VKA+P PG VLIH++TEK K P
Sbjct: 118 SGSSLFEELGMYYIGPMDGHNIEDLVNIFEKVKAMPAPGPVLIHIVTEKGKGYPPALAAA 177
Query: 183 ----------------------KLQQTRLFCKIL------DNR-------MGGGTGLNLF 207
L T+ F L DN+ MGGGTGLN F
Sbjct: 178 DRMHGVVKFDPKTGHQFKPKPSTLAYTQYFADSLIKEAEMDNKIVAIHAAMGGGTGLNYF 237
Query: 208 QKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVR 267
QK FP RCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR +DQV HDVDLQKLPVR
Sbjct: 238 QKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVR 297
Query: 268 FAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
FA+DRAGLVGADGPTHCGAFD TFMACLPNM+VM
Sbjct: 298 FAMDRAGLVGADGPTHCGAFDITFMACLPNMIVM 331
>gi|242043234|ref|XP_002459488.1| hypothetical protein SORBIDRAFT_02g005410 [Sorghum bicolor]
gi|241922865|gb|EER96009.1| hypothetical protein SORBIDRAFT_02g005410 [Sorghum bicolor]
Length = 517
Score = 313 bits (803), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 169/330 (51%), Positives = 205/330 (62%), Gaps = 73/330 (22%)
Query: 42 MAVGRDLLGKNNHVISVIVEGATIARMSYEAINNAG------------------------ 77
MAV RDLLG+ NHVISVI +GA A +YEA+NN+G
Sbjct: 1 MAVARDLLGRKNHVISVIGDGAMTAGQAYEAMNNSGFLDANMIVVLNDNKQVSLPTATLD 60
Query: 78 -------VLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAG 126
L++AL +L S+ +FR+L + A K ++ GG HE+ D ++R + +
Sbjct: 61 GPSKPVGALSRALTKLQSSTKFRRLREAA---KSVTKQIGGPTHEVAAKVDEYARGMISA 117
Query: 127 SRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--- 183
+ FE+LGLYYIGPVDGH++EDL + ++VKA+P PG VLIH++TEK K LP +
Sbjct: 118 WGSSLFEELGLYYIGPVDGHSVEDLVTIFEKVKAMPAPGPVLIHIVTEKGKGYLPAEAAA 177
Query: 184 -----------------------LQQTRLFCKIL---------DNRMGGGTGLNLFQKHF 211
L T+ F + L MGGGTGLN FQK F
Sbjct: 178 DRMHGVVKFEPSTGKQLKSKSSTLSYTQYFAESLMGGDKVVAIHAAMGGGTGLNYFQKRF 237
Query: 212 PIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAID 271
P RCFDVGI EQHAVTFAAGLAAEGLKPFCAIYSSFLQR +DQV HDVDLQ+LPVRFA+D
Sbjct: 238 PERCFDVGITEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFALD 297
Query: 272 RAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
AGLVGADGPTHCGAFD T+MACLPNMVVM
Sbjct: 298 HAGLVGADGPTHCGAFDVTYMACLPNMVVM 327
>gi|297835124|ref|XP_002885444.1| 1-deoxyxylulose-5-phosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297331284|gb|EFH61703.1| 1-deoxyxylulose-5-phosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 313 bits (802), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 176/348 (50%), Positives = 211/348 (60%), Gaps = 67/348 (19%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+TIRQT GL E+ HD+FG GHSST+ISAGL GMAVGRDL G NN
Sbjct: 138 MKTIRQTNGLSGYTNRRESEHDSFGTGHSSTTISAGL----------GMAVGRDLKGMNN 187
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK-ALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
V++VI +GA A +YEA+NNAG L+ + L+ N Q G
Sbjct: 188 SVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL----------PTANLDGP 237
Query: 113 MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVI 172
+ A S + +G+ + FE+LG +Y+GPVDGHN++DL +L++VK+ G VLIHV+
Sbjct: 238 TPPVGALSCALSSGTGSTLFEELGFHYVGPVDGHNIDDLVSILEKVKSTKPIGPVLIHVV 297
Query: 173 TEKEKAML----------------PLKLQQ----------TRLFCKILDNR--------- 197
TEK + P +Q T F + L
Sbjct: 298 TEKGRGYPYAERADDKYHGVLKFDPATGKQFKNISKTQSYTSCFVEALTAEAEADKNIVA 357
Query: 198 ----MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFD 253
MGGGT LNLF+ FP RCFDVGIAEQHAVTFAAGLA EGLKPFC IYSSF+QR +D
Sbjct: 358 IHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYD 417
Query: 254 QVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
QV HDVDLQKLPVRFAIDRAGL+GADGPTHCGAFD TFMACLPNM+VM
Sbjct: 418 QVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVM 465
>gi|414883877|tpg|DAA59891.1| TPA: hypothetical protein ZEAMMB73_438312, partial [Zea mays]
Length = 467
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/343 (51%), Positives = 204/343 (59%), Gaps = 98/343 (28%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ HDAFGVGHSSTSISA L GMAV RDLLG+ N
Sbjct: 168 MHTIRQTSGLAGFPKRDESAHDAFGVGHSSTSISAAL----------GMAVARDLLGRKN 217
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NN+G L++A
Sbjct: 218 HVISVIGDGAMTAGQAYEAMNNSGYLDANMIVVLNDNKQVSLPTATLDGPSKPVGALSRA 277
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L S+ +FR+L + A K ++ GG HE+ D ++R + + S + FE+LGLY
Sbjct: 278 LTKLQSSTKFRRLREAA---KSVTKQIGGPTHEVAAKVDEYARGMISASGSSLFEELGLY 334
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRLFCKILDNRM 198
YIGPVDGH + V IH M
Sbjct: 335 YIGPVDGHCV------------------VAIHAA-------------------------M 351
Query: 199 GGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHD 258
GGGTGLN FQK FP RCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR +DQV HD
Sbjct: 352 GGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHD 411
Query: 259 VDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
VDLQ+LPVRFA+DRAGLVGADGPTHCGAFD +MACLPNMVVM
Sbjct: 412 VDLQRLPVRFALDRAGLVGADGPTHCGAFDVAYMACLPNMVVM 454
>gi|21593831|gb|AAM65798.1| 1-D-deoxyxylulose 5-phosphate synthase, putative [Arabidopsis
thaliana]
Length = 628
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/348 (49%), Positives = 214/348 (61%), Gaps = 59/348 (16%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+TIRQT GL E+ HD+FG GHSST++SAGL GMAVGRDL G NN
Sbjct: 139 MKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGL----------GMAVGRDLKGMNN 188
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQM 113
V+SVI +GA A +YEA+NNAG L+ + + ++ +Q+ + Q G
Sbjct: 189 SVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDN--KQVSLPTANLDGPTQPVGALS 246
Query: 114 HEIDAF--SREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHV 171
+ +R + + + FE+LG +Y+GPVDGHN++DL +L+ +K+ G VLIHV
Sbjct: 247 CALSRLQSNRGMIRETSSTLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHV 306
Query: 172 ITEK-------EKA-----MLPLKLQQTRLFCKILDNR---------------------- 197
+TEK E+A +L + + F I +
Sbjct: 307 VTEKGRGYPYAERADDKYHVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIVA 366
Query: 198 ----MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFD 253
MGGGT LNLF+ FP RCFDVGIAEQHAVTFAAGLA EGLKPFC IYSSF+QR +D
Sbjct: 367 IHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYD 426
Query: 254 QVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
QV HDVDLQKLPVRFAIDRAGL+GADGPTHCGAFD TFMACLPNM+VM
Sbjct: 427 QVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVM 474
>gi|186510292|ref|NP_566686.2| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana]
gi|332642996|gb|AEE76517.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana]
Length = 640
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 173/347 (49%), Positives = 209/347 (60%), Gaps = 57/347 (16%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+TIRQT GL E+ HD+FG GHSST++SAGL GMAVGRDL G NN
Sbjct: 151 MKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGL----------GMAVGRDLKGMNN 200
Query: 54 HVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
V+SVI +GA A +YEA+NNAG L + + L+ N Q
Sbjct: 201 SVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCA 260
Query: 113 MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVI 172
+ + + I S + FE+LG +Y+GPVDGHN++DL +L+ +K+ G VLIHV+
Sbjct: 261 LSRLQSNCGMIRETS-STLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHVV 319
Query: 173 TEK-------EKA-----MLPLKLQQTRLFCKILDNR----------------------- 197
TEK E+A +L + + F I +
Sbjct: 320 TEKGRGYPYAERADDKYHVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIVAI 379
Query: 198 ---MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQ 254
MGGGT LNLF+ FP RCFDVGIAEQHAVTFAAGLA EGLKPFC IYSSF+QR +DQ
Sbjct: 380 HAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYDQ 439
Query: 255 VAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
V HDVDLQKLPVRFAIDRAGL+GADGPTHCGAFD TFMACLPNM+VM
Sbjct: 440 VVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVM 486
>gi|186510290|ref|NP_850620.2| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana]
gi|332642995|gb|AEE76516.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana]
Length = 641
Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 173/348 (49%), Positives = 209/348 (60%), Gaps = 58/348 (16%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+TIRQT GL E+ HD+FG GHSST++SAGL GMAVGRDL G NN
Sbjct: 151 MKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGL----------GMAVGRDLKGMNN 200
Query: 54 HVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
V+SVI +GA A +YEA+NNAG L + + L+ N Q
Sbjct: 201 SVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCA 260
Query: 113 MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVI 172
+ + + I S + FE+LG +Y+GPVDGHN++DL +L+ +K+ G VLIHV+
Sbjct: 261 LSRLQSNCGMIRETS-STLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHVV 319
Query: 173 TEK-------EKA------MLPLKLQQTRLFCKILDNR---------------------- 197
TEK E+A +L + + F I +
Sbjct: 320 TEKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIVA 379
Query: 198 ----MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFD 253
MGGGT LNLF+ FP RCFDVGIAEQHAVTFAAGLA EGLKPFC IYSSF+QR +D
Sbjct: 380 IHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYD 439
Query: 254 QVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
QV HDVDLQKLPVRFAIDRAGL+GADGPTHCGAFD TFMACLPNM+VM
Sbjct: 440 QVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVM 487
>gi|209529759|gb|ACI49774.1| At3g21500 [Arabidopsis thaliana]
Length = 629
Score = 303 bits (776), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 173/348 (49%), Positives = 209/348 (60%), Gaps = 58/348 (16%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+TIRQT GL E+ HD+FG GHSST++SAGL GMAVGRDL G NN
Sbjct: 139 MKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGL----------GMAVGRDLKGMNN 188
Query: 54 HVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
V+SVI +GA A +YEA+NNAG L + + L+ N Q
Sbjct: 189 SVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCA 248
Query: 113 MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVI 172
+ + + I S + FE+LG +Y+GPVDGHN++DL +L+ +K+ G VLIHV+
Sbjct: 249 LSRLQSNCGMIRETS-STLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHVV 307
Query: 173 TEK-------EKA------MLPLKLQQTRLFCKILDNR---------------------- 197
TEK E+A +L + + F I +
Sbjct: 308 TEKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIVA 367
Query: 198 ----MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFD 253
MGGGT LNLF+ FP RCFDVGIAEQHAVTFAAGLA EGLKPFC IYSSF+QR +D
Sbjct: 368 IHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYD 427
Query: 254 QVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
QV HDVDLQKLPVRFAIDRAGL+GADGPTHCGAFD TFMACLPNM+VM
Sbjct: 428 QVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVM 475
>gi|51970458|dbj|BAD43921.1| putative 1-D-deoxyxylulose 5-phosphate synthase [Arabidopsis
thaliana]
Length = 629
Score = 303 bits (775), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 173/348 (49%), Positives = 209/348 (60%), Gaps = 58/348 (16%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+TIRQT GL E+ HD+FG GHSST++SAGL GMAVGRDL G NN
Sbjct: 139 MKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGL----------GMAVGRDLKGMNN 188
Query: 54 HVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
V+SVI +GA A +YEA+NNAG L + + L+ N Q
Sbjct: 189 SVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCA 248
Query: 113 MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVI 172
+ + + I S + FE+LG +Y+GPVDGHN++DL +L+ +K+ G VLIHV+
Sbjct: 249 LSRLQSNCGMIRETS-STLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHVV 307
Query: 173 TEK-------EKA------MLPLKLQQTRLFCKILDNR---------------------- 197
TEK E+A +L + + F I +
Sbjct: 308 TEKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIVA 367
Query: 198 ----MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFD 253
MGGGT LNLF+ FP RCFDVGIAEQHAVTFAAGLA EGLKPFC IYSSF+QR +D
Sbjct: 368 IHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYD 427
Query: 254 QVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
QV HDVDLQKLPVRFAIDRAGL+GADGPTHCGAFD TFMACLPNM+VM
Sbjct: 428 QVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDMTFMACLPNMIVM 475
>gi|11994386|dbj|BAB02345.1| 1-deoxyxylulose-5-phosphate synthase; transketolase [Arabidopsis
thaliana]
Length = 604
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 173/348 (49%), Positives = 209/348 (60%), Gaps = 58/348 (16%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+TIRQT GL E+ HD+FG GHSST++SAGL GMAVGRDL G NN
Sbjct: 78 MKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGL----------GMAVGRDLKGMNN 127
Query: 54 HVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
V+SVI +GA A +YEA+NNAG L + + L+ N Q
Sbjct: 128 SVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCA 187
Query: 113 MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVI 172
+ + + I S + FE+LG +Y+GPVDGHN++DL +L+ +K+ G VLIHV+
Sbjct: 188 LSRLQSNCGMIRETS-STLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHVV 246
Query: 173 TEK-------EKA------MLPLKLQQTRLFCKILDNR---------------------- 197
TEK E+A +L + + F I +
Sbjct: 247 TEKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIVA 306
Query: 198 ----MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFD 253
MGGGT LNLF+ FP RCFDVGIAEQHAVTFAAGLA EGLKPFC IYSSF+QR +D
Sbjct: 307 IHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYD 366
Query: 254 QVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
QV HDVDLQKLPVRFAIDRAGL+GADGPTHCGAFD TFMACLPNM+VM
Sbjct: 367 QVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVM 414
>gi|51969370|dbj|BAD43377.1| putative 1-D-deoxyxylulose 5-phosphate synthase [Arabidopsis
thaliana]
Length = 629
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/348 (49%), Positives = 209/348 (60%), Gaps = 58/348 (16%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+TIRQT GL E+ HD+FG GHSST++SAGL GMAVGRDL G NN
Sbjct: 139 MKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGL----------GMAVGRDLKGMNN 188
Query: 54 HVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
V+SVI +GA A +YEA+NNAG L + + L+ N Q
Sbjct: 189 SVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCA 248
Query: 113 MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVI 172
+ + + I S + FE+LG +Y+GPVDGHN++DL +L+ +K+ G VLIHV+
Sbjct: 249 LSRLQSNCGMIRETS-STLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHVV 307
Query: 173 TEK-------EKA------MLPLKLQQTRLFCKILDNR---------------------- 197
TEK E+A +L + + F I +
Sbjct: 308 TEKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIVA 367
Query: 198 ----MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFD 253
MGGGT LNLF+ FP RCFDVGIAEQHAVTFAAGLA EGLKPFC IYSSF+QR +D
Sbjct: 368 IHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYD 427
Query: 254 QVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
QV HDVDLQ+LPVRFAIDRAGL+GADGPTHCGAFD TFMACLPNM+VM
Sbjct: 428 QVVHDVDLQELPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVM 475
>gi|374498909|gb|AEZ53173.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rosa rugosa]
Length = 523
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 172/334 (51%), Positives = 204/334 (61%), Gaps = 77/334 (23%)
Query: 42 MAVGRDLLGKNNHVISVIVEGATIARMSYEAINNAG------------------------ 77
MAVGRDL GKNNHV++VI +GA A +YEA+NNAG
Sbjct: 1 MAVGRDLKGKNNHVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIIILNDNKQVSLPTANLD 60
Query: 78 -------VLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAG 126
L+ AL +L SN R+L + A K ++ GG +HE +D ++R + +G
Sbjct: 61 GPIPPVGALSSALSKLQSNRPLRELREVA---KGVTKQIGGSVHELAAKVDEYARGMISG 117
Query: 127 SRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA- 178
S + FE+LGLYYIGPVDGHN++DL +L++VK G VLIH+ITEK EKA
Sbjct: 118 SGSTLFEELGLYYIGPVDGHNVDDLIAILQEVKTTQTTGPVLIHLITEKGRGYPYAEKAA 177
Query: 179 --------MLPLKLQQ----------TRLFCKI-------------LDNRMGGGTGLNLF 207
P +Q T F + + MGGGTG+NLF
Sbjct: 178 DKYHGVAKFDPATGKQFKANASTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLF 237
Query: 208 QKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVR 267
+ FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVR
Sbjct: 238 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVR 297
Query: 268 FAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
FA+DRAGLVGADGPTHCGAFD TFMACLPNMVVM
Sbjct: 298 FAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVM 331
>gi|302850873|ref|XP_002956962.1| hypothetical protein VOLCADRAFT_107482 [Volvox carteri f.
nagariensis]
gi|300257680|gb|EFJ41925.1| hypothetical protein VOLCADRAFT_107482 [Volvox carteri f.
nagariensis]
Length = 728
Score = 299 bits (766), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 176/371 (47%), Positives = 215/371 (57%), Gaps = 80/371 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ +D FG GHSSTSISA L GMAVGRD+ K N
Sbjct: 165 MGTIRQTNGLSGFTKREESEYDPFGAGHSSTSISAAL----------GMAVGRDVKSKKN 214
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK-----------------------ALKRLHSNP 90
+VI+VI +GA M+YEA+N+AG L+K AL RL +N
Sbjct: 215 NVIAVIGDGAITGGMAYEAMNHAGFLDKNMIVSLPTQYNNKNQDPVGALSSALARLQANR 274
Query: 91 QFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
R+L + A +K +ID ++R + +G+ + FE+LGLYYIGPVDGHN++
Sbjct: 275 PLRELREIAKGVTKQLPDVVQKATAKIDEYARGMISGTGSTLFEELGLYYIGPVDGHNVD 334
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------------------- 186
DL VL +VK+ G VL+HV+TEK + LP + Q
Sbjct: 335 DLVAVLNEVKSAETVGPVLVHVVTEKGRGYLPAETAQDKMHGVVKFDPRTGKQQQAKTKA 394
Query: 187 ---TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T F L D+R M GGTGL F+K FP R FDVGIAEQHAVTFAA
Sbjct: 395 MSYTNYFADALTAEAERDSRIVAVHAAMAGGTGLYRFEKRFPERVFDVGIAEQHAVTFAA 454
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA EGL PFC IYS+F+QR +DQ+ HDV LQKLPVRFA+DRAGLVGADG THCGAFD T
Sbjct: 455 GLACEGLVPFCTIYSTFMQRGYDQIVHDVSLQKLPVRFAMDRAGLVGADGSTHCGAFDVT 514
Query: 291 FMACLPNMVVM 301
FMA LP+M+ M
Sbjct: 515 FMASLPHMITM 525
>gi|412990479|emb|CCO19797.1| 1-deoxy-D-xylulose-5-phosphate (DXP) synthase, plastid precursor
[Bathycoccus prasinos]
Length = 727
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/379 (47%), Positives = 216/379 (56%), Gaps = 88/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ D FG GHSSTSISAGL GMAV RD+ GK+N
Sbjct: 159 MNTIRQTDGLSPFTKRSESPFDCFGAGHSSTSISAGL----------GMAVARDMQGKSN 208
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
VI+VI +GA M+YEA+NNAG L+
Sbjct: 209 QVIAVIGDGAITGGMAYEAMNNAGYLDTNMIIILNDNQQVSLPTQYNSLNQDPVGALSST 268
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
RL S+ R+L + A + +K ++D ++R + +GS A FE+LGLYYIG
Sbjct: 269 FARLQSSKPLRELRESAKAITKQMPTPVQEVTAKVDEYARGMISGSGATLFEELGLYYIG 328
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------- 186
VDGHNL DL +L++VK G VLIHV+TEK + + Q
Sbjct: 329 TVDGHNLNDLVAILQEVKETKSVGPVLIHVVTEKGRGYSFAESAQDKYHGVSKFDLASGE 388
Query: 187 -----------TRLFCK------ILDNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T++F +LD+ MGGGTG+N F+K+F R FDVGIAE
Sbjct: 389 QKKASTTIPTYTQVFADAMVGEAMLDDSIVAVHAAMGGGTGINHFEKYFAERTFDVGIAE 448
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAGLAAEGLKP C IYS+FLQR FDQV HDV LQKLPVRFA+DRAGLVGADGPT
Sbjct: 449 QHAVTFAAGLAAEGLKPMCTIYSTFLQRGFDQVVHDVALQKLPVRFAMDRAGLVGADGPT 508
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GA+D TFMACLP+MVVM
Sbjct: 509 HAGAYDITFMACLPDMVVM 527
>gi|357447515|ref|XP_003594033.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
gi|355483081|gb|AES64284.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
Length = 718
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/378 (46%), Positives = 221/378 (58%), Gaps = 90/378 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ D FG GHSST+ISAGL GMAVGRDL G+ +
Sbjct: 160 MHTLRQKDGLSGFTKRSESEFDIFGTGHSSTTISAGL----------GMAVGRDLKGEKH 209
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-------------------------------KA 82
+V+++I +GA A ++EA+NNAG LN +
Sbjct: 210 NVVTIIGDGAMTAGQAFEAMNNAGYLNSNMIVILNDNKQVSLPTADLDGPIPPVGALSRT 269
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGP 142
L RL SN R+L + A K ++ G + +++ ++ + +GS + FE+LGL YIGP
Sbjct: 270 LSRLQSNIPLRELREVA---KGVTKQNGRPIAKVEEYALGMISGSGSTLFEELGLDYIGP 326
Query: 143 VDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPLKLQQ 186
VDGH+++DL +LKQVK+ G VLIHV+TEK EKA P +Q
Sbjct: 327 VDGHSIDDLVAILKQVKSPKKTGPVLIHVVTEKGLGYSYAEKAADKYHGVAKFDPATGKQ 386
Query: 187 --TRLFCKILDN---------------------RMGGGTGLNLFQKHFPIRCFDVGIAEQ 223
T+ +L + MGGGTG+N F + FP RCFDVGIAEQ
Sbjct: 387 FKTKAPTPVLTSCFVDALIAEAEADKGIVGIHAAMGGGTGMNHFLRRFPTRCFDVGIAEQ 446
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
HAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRF ID+AG VG DGPTH
Sbjct: 447 HAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFVIDKAGFVGEDGPTH 506
Query: 284 CGAFDTTFMACLPNMVVM 301
CG+FD T+MACLPNMVVM
Sbjct: 507 CGSFDVTYMACLPNMVVM 524
>gi|159488107|ref|XP_001702062.1| 1-deoxy-D-xylulose 5-phosphate synthase [Chlamydomonas reinhardtii]
gi|158271436|gb|EDO97255.1| 1-deoxy-D-xylulose 5-phosphate synthase [Chlamydomonas reinhardtii]
Length = 708
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 177/379 (46%), Positives = 215/379 (56%), Gaps = 88/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ +D FG GHSSTSISA L GMAVGRD+ GK N
Sbjct: 139 MATIRQTNGLSGFTKRDESEYDPFGAGHSSTSISAAL----------GMAVGRDVKGKKN 188
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK-------------------------------A 82
VI+VI +GA M+YEA+N+AG L+K A
Sbjct: 189 SVIAVIGDGAITGGMAYEAMNHAGFLDKNMIVILNDNQQVSLPTQYNNKNQDPVGALSSA 248
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
L RL +N R+L + A +K +ID ++R + +G+ + FE+LGLYYIG
Sbjct: 249 LARLQANRPLRELREIAKGVTKQLPDVVQKATAKIDEYARGMISGTGSTLFEELGLYYIG 308
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------- 186
PVDGHNL+DL VL +V++ G VL+HV+TEK + LP + Q
Sbjct: 309 PVDGHNLDDLIAVLSEVRSAETVGPVLVHVVTEKGRGYLPAETAQDKMHGVVKFDPRTGK 368
Query: 187 -----------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T F L D+R M GGTGL F+K FP R FDVGIAE
Sbjct: 369 QVQAKTKAMSYTNYFADALTAEAERDSRIVAVHAAMAGGTGLYRFEKKFPDRTFDVGIAE 428
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAGLA EGL PFC IYS+F+QR +DQ+ HDV LQKLPVRFA+DRAGLVGADG T
Sbjct: 429 QHAVTFAAGLACEGLVPFCTIYSTFMQRGYDQIVHDVSLQKLPVRFAMDRAGLVGADGST 488
Query: 283 HCGAFDTTFMACLPNMVVM 301
HCGAFD TFMA LP+M+ M
Sbjct: 489 HCGAFDVTFMASLPHMITM 507
>gi|4185881|emb|CAA07554.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chlamydomonas reinhardtii]
Length = 735
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 177/379 (46%), Positives = 215/379 (56%), Gaps = 88/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ +D FG GHSSTSISA L GMAVGRD+ GK N
Sbjct: 166 MATIRQTNGLSGFTKRDESEYDPFGAGHSSTSISAAL----------GMAVGRDVKGKKN 215
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK-------------------------------A 82
VI+VI +GA M+YEA+N+AG L+K A
Sbjct: 216 SVIAVIGDGAITGGMAYEAMNHAGFLDKNMIVILNDNQQVSLPTQYNNKNQDPVGALSSA 275
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
L RL +N R+L + A +K +ID ++R + +G+ + FE+LGLYYIG
Sbjct: 276 LARLQANRPLRELREIAKGVTKQLPDVVQKATAKIDEYARGMISGTGSTLFEELGLYYIG 335
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------- 186
PVDGHNL+DL VL +V++ G VL+HV+TEK + LP + Q
Sbjct: 336 PVDGHNLDDLIAVLSEVRSAETVGPVLVHVVTEKGRGYLPAETAQDKMHGVVKFDPRTGK 395
Query: 187 -----------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T F L D+R M GGTGL F+K FP R FDVGIAE
Sbjct: 396 QVQAKTKAMSYTNYFADALTAEAERDSRIVAVHAAMAGGTGLYRFEKKFPDRTFDVGIAE 455
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAGLA EGL PFC IYS+F+QR +DQ+ HDV LQKLPVRFA+DRAGLVGADG T
Sbjct: 456 QHAVTFAAGLACEGLVPFCTIYSTFMQRGYDQIVHDVSLQKLPVRFAMDRAGLVGADGST 515
Query: 283 HCGAFDTTFMACLPNMVVM 301
HCGAFD TFMA LP+M+ M
Sbjct: 516 HCGAFDVTFMASLPHMITM 534
>gi|145342439|ref|XP_001416190.1| 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor
[Ostreococcus lucimarinus CCE9901]
gi|144576415|gb|ABO94483.1| 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor
[Ostreococcus lucimarinus CCE9901]
Length = 746
Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 175/379 (46%), Positives = 216/379 (56%), Gaps = 88/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSSTSISAGL GMAV RD+ G +N
Sbjct: 177 MNTMRQTGGLSPFTKRSESPYDCFGAGHSSTSISAGL----------GMAVARDMQGGDN 226
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVIS+I +GA M+YEA+NNAG L+
Sbjct: 227 HVISIIGDGAITGGMAYEAMNNAGFLDTNMIIILNDNQQVSLPTQYNSMNQDPVGALSST 286
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
RL S+ R+L + A + +K ++D ++R + +GS + FE+LGLYYIG
Sbjct: 287 FARLQSSRPLRELRESAKAITKQMPTPVQEVTAKVDEYARGMISGSGSTLFEELGLYYIG 346
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------- 186
VDGHNLEDL +L++VK G VLIH++TEK + + Q
Sbjct: 347 TVDGHNLEDLVAILQEVKETKSVGPVLIHIVTEKGRGYSYAEDAQDKYHGVSKFDLASGE 406
Query: 187 -----------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T++F L D + MGGGTGLN F+K+F R +DVGIAE
Sbjct: 407 QSKSTDTIPTYTKVFADALIGEAMADEKVVAVHAAMGGGTGLNHFEKYFADRTYDVGIAE 466
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAGLA EGLKP C IYS+FLQR +DQV HDV LQKLPVRFA+DRAGLVGADGPT
Sbjct: 467 QHAVTFAAGLACEGLKPMCTIYSTFLQRGWDQVVHDVALQKLPVRFAMDRAGLVGADGPT 526
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GA+D TFMACLP+MVVM
Sbjct: 527 HAGAYDVTFMACLPDMVVM 545
>gi|307103505|gb|EFN51764.1| hypothetical protein CHLNCDRAFT_59788 [Chlorella variabilis]
Length = 720
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 176/382 (46%), Positives = 216/382 (56%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D FG GHSSTSISA L GMAVGRD+ G+ N
Sbjct: 159 MHTIRQQGGLSGFTKRSESPYDPFGAGHSSTSISAAL----------GMAVGRDVKGRKN 208
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA M+YEA+N+AG L+
Sbjct: 209 NVVAVIGDGAITGGMAYEAMNHAGFLDTNMIVILNDNQQVSLPTQYNGKNQEPVGALSST 268
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH----EIDAFSREIEAGSRACFFEDLGLY 138
L RL +N Q R+L + A K ++ G + +ID ++R + +G+ + FE+LG Y
Sbjct: 269 LARLQANRQLRELREIA---KGVTKQLPGVIQNATAKIDEYARGMISGTGSTLFEELGFY 325
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------ 186
YIGPVDGHNL+DL VL ++K G VL+HV+TEK + LP +
Sbjct: 326 YIGPVDGHNLQDLIDVLSEIKTTETVGPVLLHVVTEKGRGYLPAESASDKMHGVVQYDTV 385
Query: 187 --------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
T F L D+R MGGGTG+N F+K FP R +DVG
Sbjct: 386 TGKQVKAKSQAQSFTNYFADALVAEAKKDSRIVGIHAAMGGGTGMNRFEKVFPERVYDVG 445
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGL PF AIYSSFLQR +DQV HDV LQ LPVRFA+DRAGLVGAD
Sbjct: 446 IAEQHAVTFAAGLACEGLAPFVAIYSSFLQRGYDQVVHDVSLQNLPVRFAMDRAGLVGAD 505
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
G THCGAFD +MACLPNMVVM
Sbjct: 506 GATHCGAFDVAYMACLPNMVVM 527
>gi|308800422|ref|XP_003074992.1| Dxs 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor (IC)
[Ostreococcus tauri]
gi|119358853|emb|CAL52263.2| Dxs 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor (IC)
[Ostreococcus tauri]
Length = 741
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 173/379 (45%), Positives = 218/379 (57%), Gaps = 88/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSSTSISAGL GMAV RD+ G++
Sbjct: 172 MNTMRQTGGLSPFTKRSESPYDCFGAGHSSTSISAGL----------GMAVARDMQGEDF 221
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVIS+I +GA M+YEA+NNAG L+
Sbjct: 222 HVISIIGDGAITGGMAYEAMNNAGFLDTNMIIILNDNQQVSLPTQYNSLNQDPVGALSST 281
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
RL S+ R+L + A + +K ++D ++R + +GS + FE+LGLYYIG
Sbjct: 282 FARLQSSRPLRELRESAKAITKQMPTPVQEVTAKVDEYARGMISGSGSTLFEELGLYYIG 341
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------- 186
VDGHNLEDL +L++VK G VLIH++TEK + + Q
Sbjct: 342 TVDGHNLEDLVAILQEVKETRSVGPVLIHIVTEKGRGYSYAEDAQDKYHGVSKFDLASGR 401
Query: 187 -----------TRLFCK------ILDNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T++F ++D++ MGGGTGLN F+K+F R +DVGIAE
Sbjct: 402 QSQLKENAPSYTKVFADALIGEAMMDDKVVAVHAAMGGGTGLNHFEKYFADRTYDVGIAE 461
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAGLA EGLKP C IYS+FLQR +DQV HDV LQKLPVRFA+DRAGLVGADGPT
Sbjct: 462 QHAVTFAAGLACEGLKPMCTIYSTFLQRGWDQVVHDVALQKLPVRFAMDRAGLVGADGPT 521
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GA+D TFMACLP+MVVM
Sbjct: 522 HAGAYDVTFMACLPDMVVM 540
>gi|255070459|ref|XP_002507311.1| predicted protein [Micromonas sp. RCC299]
gi|226522586|gb|ACO68569.1| predicted protein [Micromonas sp. RCC299]
Length = 738
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/379 (45%), Positives = 213/379 (56%), Gaps = 88/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ D FG GHSSTSISAGL GMAV RD+ G++N
Sbjct: 170 MSTMRQTNGLSPFTKRSESPFDCFGAGHSSTSISAGL----------GMAVARDMQGRSN 219
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVI+VI +GA M+YEA+NNAG L+
Sbjct: 220 HVIAVIGDGAITGGMAYEAMNNAGYLDTNMIIILNDNQQVSLPTQYNSLNQDPVGALSST 279
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
RL S+ R+L + A + +K ++D ++R + +GS + FE+LGLYYIG
Sbjct: 280 FARLQSSKPLRELRESAKAITKQMPVPVQEVTAKVDEYARGMISGSGSTLFEELGLYYIG 339
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------- 186
VDGHNL+DL +L++VK+ G VLIH++TEK + + Q
Sbjct: 340 TVDGHNLQDLVAILEEVKSTRSVGPVLIHIVTEKGRGYSYAEAAQDKYHGVSTFDVASGK 399
Query: 187 -----------TRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T+ F L MGGGTGLN F+K F R FDVGIAE
Sbjct: 400 QKKSASGIPTYTQFFADALVGEAGLDENVVAVHAAMGGGTGLNHFEKFFADRTFDVGIAE 459
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTF+AGLA EGLKP CA+YS+FLQR FDQV HDV LQKLPVRFA+DRAGLVG DGPT
Sbjct: 460 QHAVTFSAGLAVEGLKPVCAVYSTFLQRGFDQVVHDVALQKLPVRFAMDRAGLVGEDGPT 519
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GA+D TFMACLP+MVVM
Sbjct: 520 HAGAYDVTFMACLPDMVVM 538
>gi|224102539|ref|XP_002312717.1| predicted protein [Populus trichocarpa]
gi|222852537|gb|EEE90084.1| predicted protein [Populus trichocarpa]
Length = 713
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 181/403 (44%), Positives = 218/403 (54%), Gaps = 115/403 (28%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ +D FG GHSST+ISAGL GMAVGRDL G+ N
Sbjct: 132 MHTIRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGL----------GMAVGRDLKGRAN 181
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 182 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSA 241
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 242 LSRLQSNRPLRELREVA---KGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 298
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+VK+ G VLIHV+TEK + P
Sbjct: 299 YIGPVDGHNIDDLIAILKEVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVNKFDPA 358
Query: 183 KLQQTRLFCKI-----------------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q++ + MGGGTGLNLF + FP RCFDVG
Sbjct: 359 TGKQSKASASTQSYTTYFAEALIAEAEADKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVG 418
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQ-RCFDQVAH---------DVDLQ------- 262
IAEQHAVTFAAGLA EGLKPFCAIYS FL +D D D
Sbjct: 419 IAEQHAVTFAAGLACEGLKPFCAIYSFFLLILLYDNTQQYLVGIILLPDTDSSPHVDTII 478
Query: 263 ----KLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
KLPVRFA+DRAGLVGADGPTHCGAFD T+MACLPNMVVM
Sbjct: 479 NVKMKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVM 521
>gi|303274126|ref|XP_003056386.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462470|gb|EEH59762.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 739
Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 171/379 (45%), Positives = 211/379 (55%), Gaps = 88/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R+T GL E+ D FG GHSSTSISAGL GMAV RD+ G++N
Sbjct: 163 MNTMRRTRGLSPFTKRSESPFDCFGAGHSSTSISAGL----------GMAVARDMQGRSN 212
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVI+VI +GA M+YEA+NNAG L+
Sbjct: 213 HVIAVIGDGAITGGMAYEAMNNAGYLDTNMIIILNDNQQVSLPTQYNSLNQDPVGALSST 272
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
RL S+ R+L + A + +K ++D ++R + +GS + FE+LGLYYIG
Sbjct: 273 FARLQSSKPLRELRESAKAITKQMPVPVQEVTAKVDEYARGMISGSGSTLFEELGLYYIG 332
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------- 186
VDGHNL+DL +L++VK+ G VLIH +TEK + + Q
Sbjct: 333 TVDGHNLQDLVAILEEVKSTRSVGPVLIHTVTEKGRGYSYAEAAQDKYHGVSTFDVASGK 392
Query: 187 -----------TRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T++F L MGGGTGLN F++ F R FDVGIAE
Sbjct: 393 QKKSSGGIPSYTQVFADALIGEASRDESVVAVHAAMGGGTGLNHFERFFADRTFDVGIAE 452
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAGLA EGLKP C IYS+FLQR FDQV HDV LQKLPVRFA+DRAGLVG DGPT
Sbjct: 453 QHAVTFAAGLAVEGLKPVCTIYSTFLQRGFDQVVHDVALQKLPVRFAMDRAGLVGEDGPT 512
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GA+D FMACLP+MVVM
Sbjct: 513 HAGAYDVAFMACLPDMVVM 531
>gi|251826344|gb|ACT21080.1| 1-deoxy-D-xylulose 5-phosphate synthase [Dunaliella salina]
Length = 753
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/379 (45%), Positives = 210/379 (55%), Gaps = 88/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+TIR+T GL E+ +D FG GHSSTSISAGL GMAVGRD +NN
Sbjct: 182 MQTIRKTGGLSGFTKRAESEYDPFGAGHSSTSISAGL----------GMAVGRDTKNRNN 231
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK-------------------------------A 82
V++VI +GA M+YEA+N+AG L+K
Sbjct: 232 QVVAVIGDGAITGGMAYEAMNHAGFLDKNMIVILNDNQQVSLPTQYNSKNQAPVGAMAGT 291
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
L R+ +N R+L + A +K +ID ++R + +G+ + FE+LGLYYIG
Sbjct: 292 LARIQANRPLRELREVAKGMTKQLPTAVQNATAKIDEYARGMISGTGSTLFEELGLYYIG 351
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------- 186
P+DGHNL+DL VL +V++ G VLIHVITEK P + Q
Sbjct: 352 PLDGHNLDDLISVLSEVRSAETIGPVLIHVITEKGHGYEPAEASQDKMHGVVKFDPKTGK 411
Query: 187 -----------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T F L D+R M GGTGL F+ P R FDVGIAE
Sbjct: 412 QFASKPKTMSYTNYFADSLIAEAKRDSRIMAIHAAMAGGTGLTRFENALPDRVFDVGIAE 471
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTF+AGLA EGL PFC IYS+FLQR +DQV HDV LQ LPVRFA+DRAG+VGADG T
Sbjct: 472 QHAVTFSAGLACEGLVPFCTIYSTFLQRGYDQVVHDVALQNLPVRFAMDRAGMVGADGAT 531
Query: 283 HCGAFDTTFMACLPNMVVM 301
HCGAFD T+MA LPNMV M
Sbjct: 532 HCGAFDITYMASLPNMVCM 550
>gi|296444536|ref|ZP_06886500.1| deoxyxylulose-5-phosphate synthase [Methylosinus trichosporium
OB3b]
gi|296257804|gb|EFH04867.1| deoxyxylulose-5-phosphate synthase [Methylosinus trichosporium
OB3b]
Length = 643
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 168/370 (45%), Positives = 208/370 (56%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+R++RQ GL E+ +DAFG GHSSTSISAGL GMA+GRDL G NN
Sbjct: 93 IRSLRQGGGLSGFSKRAESEYDAFGAGHSSTSISAGL----------GMAIGRDLSGGNN 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
HV++VI + A A M+YEA+NNAG L+ L RL S
Sbjct: 143 HVVAVIGDSALSAGMAYEAMNNAGALDSRLIVILNDNDMSIAPPTGAMSAYLARLVSGGA 202
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + A ++ + + + FSR G FE+LG YY+GP+DGHNLE
Sbjct: 203 YRTLRETAKQLARHLPHFLYDKARKAEEFSRSFITGG-GTMFEELGFYYVGPIDGHNLEH 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------------- 188
L VL V+ D G VL+HV+T+K K P + R
Sbjct: 262 LLPVLTNVRD-KDDGPVLVHVVTQKGKGYGPAEAAADRYHGVNRFDVLTGAQDKPKANAP 320
Query: 189 ----LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F K L D++ M GGTGL+LF+K FP R FDV IAEQHAVTFAAG
Sbjct: 321 SYTSVFAKSLVAEAERDDKIVAITAAMPGGTGLDLFEKAFPDRTFDVAIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCA+YS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADGPTH GAFD +
Sbjct: 381 LACEGYKPFCALYSTFLQRAYDQVVHDVAIQHLPVRFAIDRAGLVGADGPTHAGAFDVAY 440
Query: 292 MACLPNMVVM 301
+ C+P MV+M
Sbjct: 441 LGCIPGMVIM 450
>gi|254471675|ref|ZP_05085076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. JE062]
gi|211958877|gb|EEA94076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. JE062]
Length = 633
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 172/373 (46%), Positives = 213/373 (57%), Gaps = 88/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAV RDL G +N
Sbjct: 88 IRTLRQDGGLSGFTKRSESEYDPFGAGHSSTSISAGL----------GMAVARDLAGGDN 137
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK----------------------ALKRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG LN +L RL S
Sbjct: 138 NVIAVIGDGAMSAGMAYEAMNNAGALNSRLIVILNDNDMSIAPPVGALSASLARLVSGKT 197
Query: 92 ---FRQLCQEAFSSKDKK-QKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
FR+ ++ S+ K Q+ Q E F+R G FE+LG YY+GPVDGHN
Sbjct: 198 YTGFREAAKQVASALPKPLQEKAAQAEE---FARSFFTG--GTLFEELGFYYVGPVDGHN 252
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK------------------------ 183
L+ L VLK V+ + G +L+HV+T+K K LP +
Sbjct: 253 LDHLLPVLKNVRDAKE-GPILVHVVTQKGKGYLPAENASNKYHAVAKFDVVTGEQSKPKP 311
Query: 184 --LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
TR+F L D ++ G GTGL++F+K P R FDVGIAEQHAVTF
Sbjct: 312 NAPSYTRVFANALIEEANKDEKIVGITAAMPDGTGLDVFEKVHPTRMFDVGIAEQHAVTF 371
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAG+A+EG KPFCAIYS+FLQR +DQV HDV +QKLPVRF IDRAGLVGADG TH G+FD
Sbjct: 372 AAGMASEGYKPFCAIYSTFLQRGYDQVVHDVAIQKLPVRFPIDRAGLVGADGATHAGSFD 431
Query: 289 TTFMACLPNMVVM 301
T F++CLP MVVM
Sbjct: 432 TAFLSCLPGMVVM 444
>gi|374330008|ref|YP_005080192.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. FO-BEG1]
gi|359342796|gb|AEV36170.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. FO-BEG1]
Length = 633
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 172/373 (46%), Positives = 213/373 (57%), Gaps = 88/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAV RDL G +N
Sbjct: 88 IRTLRQDGGLSGFTKRSESEYDPFGAGHSSTSISAGL----------GMAVARDLAGGDN 137
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK----------------------ALKRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG LN +L RL S
Sbjct: 138 NVIAVIGDGAMSAGMAYEAMNNAGALNSRLIVILNDNDMSIAPPVGALSASLARLVSGKT 197
Query: 92 ---FRQLCQEAFSSKDKK-QKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
FR+ ++ S+ K Q+ Q E F+R G FE+LG YY+GPVDGHN
Sbjct: 198 YTGFREAAKQVASALPKPLQEKAAQAEE---FARSFFTG--GTLFEELGFYYVGPVDGHN 252
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK------------------------ 183
L+ L VLK V+ + G +L+HV+T+K K LP +
Sbjct: 253 LDHLLPVLKNVRDAKE-GPILVHVVTQKGKGYLPAENASNKYHAVAKFDVVTGEQSKPKP 311
Query: 184 --LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
TR+F L D ++ G GTGL++F+K P R FDVGIAEQHAVTF
Sbjct: 312 NAPSYTRVFANALIEEANKDEKIVGITAAMPDGTGLDVFEKVHPTRMFDVGIAEQHAVTF 371
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAG+A+EG KPFCAIYS+FLQR +DQV HDV +QKLPVRF IDRAGLVGADG TH G+FD
Sbjct: 372 AAGMASEGYKPFCAIYSTFLQRGYDQVVHDVAIQKLPVRFPIDRAGLVGADGATHAGSFD 431
Query: 289 TTFMACLPNMVVM 301
T F++CLP MVVM
Sbjct: 432 TAFLSCLPGMVVM 444
>gi|384248886|gb|EIE22369.1| 1-deoxy-D-xylulose 5-phosphate synthase [Coccomyxa subellipsoidea
C-169]
Length = 732
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 172/392 (43%), Positives = 215/392 (54%), Gaps = 101/392 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRD------ 47
M TIRQT GL E+ +D FG GHSSTSISA L GMAV RD
Sbjct: 148 MPTIRQTGGLSGFTNRAESEYDPFGAGHSSTSISAAL----------GMAVARDFKASTT 197
Query: 48 -------LLGKNNHVISVIVEGATIARMSYEAINNAGVLNK------------------- 81
L G+ NH ++VI +GA M+YEA+N+AG L+K
Sbjct: 198 SHDSNKYLCGRKNHCVAVIGDGAITGGMAYEAMNHAGFLDKNMIVVLNDNQQVSLPTQYN 257
Query: 82 ------------ALKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSR 128
AL RL +N R+L + A +K + +ID ++R + +GS
Sbjct: 258 GKNQDPVGALSGALARLQANRPLRELREIAKGVTKQLPEPIQEATAKIDEYARGMISGSG 317
Query: 129 ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---- 184
+ FE+LGLYYIGP+DGHNLE L +L++VK+ G VLIH+ITEK P L
Sbjct: 318 STLFEELGLYYIGPIDGHNLELLITMLQEVKSTETVGPVLIHIITEKGHGYEPAVLASDK 377
Query: 185 ------------QQTRLFCKI----------------LDNR-------MGGGTGLNLFQK 209
+Q++ K LD+R MGGGTG+N F++
Sbjct: 378 MHGVAKYDIATGKQSKPKAKSGSYTNYFADALIAEAELDSRVVGIHAAMGGGTGMNRFEQ 437
Query: 210 HFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFA 269
+P R FDVGIAEQHAVTFAAGLAAEG+ P CAIYSSFLQR +DQ+ HDV LQKLPVRFA
Sbjct: 438 RYPERTFDVGIAEQHAVTFAAGLAAEGMIPMCAIYSSFLQRGYDQIVHDVALQKLPVRFA 497
Query: 270 IDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
+DRAGLVGADG TH G D T+M LPNM++M
Sbjct: 498 MDRAGLVGADGATHSGFADVTYMGVLPNMIIM 529
>gi|7446974|pir||D71420 hypothetical protein - Arabidopsis thaliana
Length = 703
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 172/392 (43%), Positives = 208/392 (53%), Gaps = 122/392 (31%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ HD FG GHSST+ISAGL IN+ GMAVGRDL GKNN
Sbjct: 147 MPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGNTINH--SFGMAVGRDLKGKNN 204
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 205 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSA 264
Query: 83 LKRLHSNPQFRQLCQEA-------FSSKDKKQKFGGQMHE----IDAFSREIEAGSRACF 131
L RL SNP R+L + A FS ++ GG MH+ +D ++R + +G+ +
Sbjct: 265 LSRLQSNPALRELREVAKASLLHFFSRMGMTKQIGGPMHQLAAKVDEYARGMISGTGSSL 324
Query: 132 FEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------- 180
FE+LGLYYIGPVDGHN++DL +LK+VK+ G VLIHV+TEK +
Sbjct: 325 FEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHG 384
Query: 181 --------PLKLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQK 209
P +Q T F + L MGGGTGLNLFQ+
Sbjct: 385 KTSVVKFDPATGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQR 444
Query: 210 HFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFA 269
FP RCFDVGIAEQHAV HDVDLQKLPVRFA
Sbjct: 445 RFPTRCFDVGIAEQHAVV-----------------------------HDVDLQKLPVRFA 475
Query: 270 IDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
+DRAGLVGADGPTHCGAFD TFMACLPNM+VM
Sbjct: 476 MDRAGLVGADGPTHCGAFDVTFMACLPNMIVM 507
>gi|307941538|ref|ZP_07656893.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseibium sp. TrichSKD4]
gi|307775146|gb|EFO34352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseibium sp. TrichSKD4]
Length = 639
Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 169/371 (45%), Positives = 207/371 (55%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL G +N
Sbjct: 94 IRTLRQKDGLSGFTKRDESEYDPFGAAHSSTSISAGL----------GMAVARDLKGGDN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG L+ L +L S P
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGSLDSRLIVILNDNDMSIAPPVGAMSAYLAKLVSGPT 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
++ L A K+ + F + E A + E G + FE++G YY+GPVDGHNLE
Sbjct: 204 YQSLRGAA---KNFAKNFPKPLQEKAAKAEEYARGFWTGGTLFEEMGFYYVGPVDGHNLE 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------------------- 186
L +LK V+ + G VLIH +T+K K P + +
Sbjct: 261 HLLPILKNVRDTHN-GPVLIHAVTQKGKGYAPAEGAKDKYHGVAKFDVITGKQAKPKANA 319
Query: 187 ---TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T +F L D++ M GTGLNLFQ FP R FDVGIAEQH VTFAA
Sbjct: 320 PSYTNVFATSLIKEAEHDDKIVTVTAAMPDGTGLNLFQDAFPDRTFDVGIAEQHGVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+FDT
Sbjct: 380 GLATEGYKPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFPIDRAGLVGADGPTHAGSFDTA 439
Query: 291 FMACLPNMVVM 301
++ACLPN VVM
Sbjct: 440 YLACLPNFVVM 450
>gi|328544916|ref|YP_004305025.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polymorphum gilvum
SL003B-26A1]
gi|326414658|gb|ADZ71721.1| 1-deoxy-D-xylulose 5-phosphate synthase [Polymorphum gilvum
SL003B-26A1]
Length = 639
Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 172/370 (46%), Positives = 210/370 (56%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAVGRDL G+ N
Sbjct: 94 IRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSISAGL----------GMAVGRDLDGRAN 143
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKA--------------LKRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG VLN L +L S P
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGSMHSRLIVVLNDNDMSIAPPVGAMSAYLAKLVSGPT 203
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
++ L A S ++ + + + + F+R G FE+LG YY+GPVDGHNLE
Sbjct: 204 YQSLRDAAKSIARALPRPLQEKAAKAEEFARGFWTG--GTLFEELGFYYVGPVDGHNLEH 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VL+ V+ G VLIHV+T+K K P + +
Sbjct: 262 LLPVLRNVRDT-HSGPVLIHVVTQKGKGYAPAEGAKDKYHGVARFDVITGKQAKPKANAP 320
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D++ M GTGL+LFQ+ FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTSVFARSLVQEAEQDDKIVAITAAMPEGTGLDLFQEAFPKRTFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPF AIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH GAFDT F
Sbjct: 381 LATEGYKPFAAIYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGLVGADGPTHAGAFDTAF 440
Query: 292 MACLPNMVVM 301
+ACLP VVM
Sbjct: 441 LACLPGFVVM 450
>gi|338739777|ref|YP_004676739.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium sp. MC1]
gi|337760340|emb|CCB66171.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
thiamin-binding [Hyphomicrobium sp. MC1]
Length = 635
Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 164/370 (44%), Positives = 210/370 (56%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+V+D FG GHSSTSISA L GMAV RDL GK+N
Sbjct: 91 IRTLRQPGGLAGFTNREESVYDPFGAGHSSTSISAAL----------GMAVARDLTGKSN 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+V++VI +GA A M+YEAINNAG N+ L R+ S+
Sbjct: 141 NVVAVIGDGAMSAGMAYEAINNAGARNERLIVVLNDNDMSIAPPTGALSAYLARVTSSGT 200
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+ L A +K + + + ++ ++R + G +FE+LG YY+GP+DGHN E
Sbjct: 201 YVHLRDYAKQLAKMLPKAWERRAARVEEYTRHLWQG--GAWFEELGFYYVGPIDGHNFEQ 258
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VLK V+ + + G +L+HV+T+K K P +
Sbjct: 259 LLPVLKNVRDL-EQGPILVHVVTQKGKGYAPAEASPDKYHGVNKFNVVTGAQDKPKPNAP 317
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T++F L D R M GTGL+ F K FP R FDVGIAEQHAVTFAAG
Sbjct: 318 SYTKVFADSLIAEARKDKRVVAITAAMPSGTGLDYFGKEFPDRTFDVGIAEQHAVTFAAG 377
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAAEG KPF AIYS+FLQR +DQV HDV +QKLPVRFAIDRAGLVGADG TH G+FD +
Sbjct: 378 LAAEGYKPFTAIYSTFLQRAYDQVVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDVAY 437
Query: 292 MACLPNMVVM 301
+ACLP+ V+M
Sbjct: 438 LACLPDFVIM 447
>gi|323135714|ref|ZP_08070797.1| deoxyxylulose-5-phosphate synthase [Methylocystis sp. ATCC 49242]
gi|322398805|gb|EFY01324.1| deoxyxylulose-5-phosphate synthase [Methylocystis sp. ATCC 49242]
Length = 642
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/370 (45%), Positives = 204/370 (55%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +DAFG GHSSTSISAGL GMAV RDL G NN
Sbjct: 93 IRTLRMGGGLSGFTKRAESEYDAFGAGHSSTSISAGL----------GMAVARDLAGGNN 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
HV++VI + + A M+YEA+NNAG L+ L RL S
Sbjct: 143 HVVAVIGDSSMSAGMAYEALNNAGALDSRLIVILNDNDMSIAPPTGAMSAYLARLVSGGA 202
Query: 92 FRQLCQEAFSSKDKKQKF-GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R + A +F + + + FSR G FE+LG YY+GP+DGHNL+
Sbjct: 203 YRSIRDAAKQLASHLPRFIYDKARKAEEFSRSFITG--GTMFEELGFYYVGPIDGHNLDH 260
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VL V+ D G VL+HV+T+K K P +
Sbjct: 261 LLPVLMNVRD-KDDGPVLVHVVTQKGKGYAPAEAADDKYHGVVKFDVETGKQFKPKANAP 319
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F K L D+R M GTGL++F KHFP R FDV IAEQHAVTFAAG
Sbjct: 320 SYTGVFAKALVAEAEHDDRIVAITAAMPSGTGLDIFGKHFPQRTFDVAIAEQHAVTFAAG 379
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCA+YS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADGPTH GAFD +
Sbjct: 380 LACEGYKPFCALYSTFLQRGYDQVVHDVAIQHLPVRFAIDRAGLVGADGPTHAGAFDIAY 439
Query: 292 MACLPNMVVM 301
+ CLP MVVM
Sbjct: 440 LGCLPGMVVM 449
>gi|338973838|ref|ZP_08629200.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bradyrhizobiaceae
bacterium SG-6C]
gi|338232565|gb|EGP07693.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bradyrhizobiaceae
bacterium SG-6C]
Length = 638
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 168/372 (45%), Positives = 208/372 (55%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL G NN
Sbjct: 92 IRTLRQGGGLSGFTKRAESEYDCFGAAHSSTSISAGL----------GMAVARDLSGGNN 141
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG ++ L RL S+
Sbjct: 142 NVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNEMSIAPPVGAMSSYLSRLTSSNT 201
Query: 92 FRQLCQEAFSSKDKKQKF---GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+R L + + KF G Q E ++R + +G FE+LG YY+GP+DGHNL
Sbjct: 202 YRSLREIGKQVAKRLPKFVEKGAQRAE--EYARGMLSG--GTLFEELGFYYVGPIDGHNL 257
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
+ L VLK V+ G LIHV+TEK K P +
Sbjct: 258 DHLLPVLKNVRD-SKVGPTLIHVVTEKGKGYTPAEASADKYHGVVKFDVATGKQAKAQAN 316
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T++F L DN+ M GTG+++F K FP R FDVGIAEQHAVTFA
Sbjct: 317 APAYTKVFGNSLVQEAEKDNKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFA 376
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA+EGLKPF AIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+FD
Sbjct: 377 AGLASEGLKPFVAIYSTFLQRAYDQVVHDVAIQGLPVRFIIDRAGLVGADGPTHAGSFDI 436
Query: 290 TFMACLPNMVVM 301
T++ CLP MV+M
Sbjct: 437 TYLGCLPGMVLM 448
>gi|414166173|ref|ZP_11422407.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia clevelandensis ATCC
49720]
gi|410894933|gb|EKS42719.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia clevelandensis ATCC
49720]
Length = 638
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 168/372 (45%), Positives = 208/372 (55%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL G NN
Sbjct: 92 IRTLRQGGGLSGFTKRAESEYDCFGAAHSSTSISAGL----------GMAVARDLSGGNN 141
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG ++ L RL S+
Sbjct: 142 NVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNEMSIAPPVGAMSSYLSRLTSSNT 201
Query: 92 FRQLCQEAFSSKDKKQKF---GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+R L + + KF G Q E ++R + +G FE+LG YY+GP+DGHNL
Sbjct: 202 YRSLREIGKQVAKRLPKFVEKGAQRAE--EYARGMLSG--GTLFEELGFYYVGPIDGHNL 257
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
+ L VLK V+ G LIHV+TEK K P +
Sbjct: 258 DHLLPVLKNVRD-SKVGPTLIHVVTEKGKGYTPAEASADKYHGVVKFDVATGKQAKAQAN 316
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T++F L DN+ M GTG+++F K FP R FDVGIAEQHAVTFA
Sbjct: 317 APAYTKVFGNSLVHEAEKDNKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFA 376
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA+EGLKPF AIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+FD
Sbjct: 377 AGLASEGLKPFVAIYSTFLQRAYDQVVHDVAIQGLPVRFIIDRAGLVGADGPTHAGSFDI 436
Query: 290 TFMACLPNMVVM 301
T++ CLP MV+M
Sbjct: 437 TYLGCLPGMVLM 448
>gi|374669416|gb|AEZ55866.1| chloroplast 1-deoxy-D-xylulose 5-phosphate synthase 2 [Mitragyna
speciosa]
Length = 492
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 162/334 (48%), Positives = 193/334 (57%), Gaps = 94/334 (28%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQTCGL E+VHDAFG GHSSTSISAGL GMAVGRDLLGK N
Sbjct: 172 MHTIRQTCGLAGFPKRDESVHDAFGAGHSSTSISAGL----------GMAVGRDLLGKAN 221
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NNAG L+KA
Sbjct: 222 HVISVIGDGAMTAGQAYEAMNNAGFLDSNLIIVLNDNKQVSLPTATLDGPAAPVGALSKA 281
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L ++ S+ + RQL + A K ++ G Q HEI D++ R + GS A FE+LGLY
Sbjct: 282 LTKMQSSRKLRQLREAA---KGVTKQLGNQAHEIAAKVDSYVRGVVNGSGASLFEELGLY 338
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL--------- 189
YIGPVDGHN+EDL Y+ K+VK++P PG VLIH++TEK K P + ++
Sbjct: 339 YIGPVDGHNIEDLVYIFKKVKSMPAPGPVLIHIMTEKGKGYPPAEAASDKMHGVVKFDPQ 398
Query: 190 -----------------FCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
F + L D++ MGGGTGLN+FQK FP RCFDVG
Sbjct: 399 TGKQLKSSSKTKTYTTYFAESLAAEAEQDDKIVAIHAAMGGGTGLNIFQKRFPHRCFDVG 458
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFD 253
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +D
Sbjct: 459 IAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYD 492
>gi|392378578|ref|YP_004985738.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum brasilense
Sp245]
gi|356880060|emb|CCD01007.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum brasilense
Sp245]
Length = 638
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 204/372 (54%), Gaps = 85/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG GHSSTSISAGL GMAV RD LG++N
Sbjct: 94 IRTLRTGGGLSGFTNRSESAYDPFGAGHSSTSISAGL----------GMAVARDQLGRDN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL-----------------------KRLHSNP 90
HVI+VI +GA A M+YEA+NNAG N L + + S P
Sbjct: 144 HVIAVIGDGAMSAGMAYEAMNNAGSANSKLIVILNDNDMSIAPPVGAMSAYLSRLISSKP 203
Query: 91 --QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
R L ++ + + + E ++R + G FE++G YYIGP+DGHNL
Sbjct: 204 YLSLRHLAKDIAEQLPRPLRTAARRAE--EYARGMVTGG--TLFEEMGFYYIGPIDGHNL 259
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
+ L VL+ V+ D VLIHV+T+K K P +
Sbjct: 260 DHLLPVLQNVRDAGDDKPVLIHVVTKKGKGYGPAEASADKLHAVAKFDVVTGAQSKPKSN 319
Query: 187 ----TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
TR+F L M GTGL+LF + FP RCFDVGIAEQHAVTFA
Sbjct: 320 APTYTRVFANALIAEAERDPGVLAITAAMPSGTGLDLFGQRFPDRCFDVGIAEQHAVTFA 379
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EG KPFCAIYS+FLQR +DQV HDV LQ+LPVRFA+DRAGLVGADG TH GAFD
Sbjct: 380 AGLATEGFKPFCAIYSTFLQRAYDQVVHDVVLQRLPVRFALDRAGLVGADGATHAGAFDV 439
Query: 290 TFMACLPNMVVM 301
++ CLP++V+M
Sbjct: 440 AYLGCLPDIVLM 451
>gi|389697003|ref|ZP_10184645.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microvirga sp. WSM3557]
gi|388585809|gb|EIM26104.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microvirga sp. WSM3557]
Length = 635
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 163/370 (44%), Positives = 207/370 (55%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL GK N
Sbjct: 90 IRTLRQADGLSGFTKRSESEYDPFGAAHSSTSISAGL----------GMAVARDLEGKRN 139
Query: 54 HVISVIVEGATIARMSYEAINNAGVL----------------------NKALKRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG + + L RL S
Sbjct: 140 NVIAVIGDGAMSAGMAYEAMNNAGAMHSRLIVILNDNDMSIAPPTGAMSSYLARLVSGGT 199
Query: 92 FRQLCQEAFSSKDKKQKF-GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R + + A K KF + + + F+R G FE+LG YY+GP+DGHNL+
Sbjct: 200 YRGIRETAKQLAKKLPKFIYDKAAKAEEFARGFWTG--GTMFEELGFYYVGPIDGHNLDH 257
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL-------------------------- 184
L +LK V+ G +L+HV+T+K K P +
Sbjct: 258 LLPILKNVRDT-GTGPILVHVVTKKGKGYAPAEAAADKYHGVVTFDVVTGAQTKAKANAP 316
Query: 185 QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T++F + L D++ M GTG++LF K FP R FDVGIAEQHAVTFAAG
Sbjct: 317 SYTKVFGESLIKEAQADDKIVAVTAAMPSGTGIDLFGKEFPARTFDVGIAEQHAVTFAAG 376
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+A EG KPFCAIYS+FLQR +DQV HDV +Q LPVRFA+DRAGLVGADG TH G+FD +
Sbjct: 377 MATEGYKPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFALDRAGLVGADGATHAGSFDVAY 436
Query: 292 MACLPNMVVM 301
+ CLPNMVVM
Sbjct: 437 LGCLPNMVVM 446
>gi|374341516|gb|AEZ35186.1| 1-deoxy-D-xylulose 5-phosphate synthase-II [Botryococcus braunii]
Length = 771
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 171/383 (44%), Positives = 212/383 (55%), Gaps = 94/383 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +DAFG GHSSTSISA L GMAVGRD +NN
Sbjct: 192 MPTIRQYKGLSGFTKRSESEYDAFGAGHSSTSISAAL----------GMAVGRDFKNQNN 241
Query: 54 HVISVIVEGATIARMSYEAINNAGVL--NKALKRLHSNPQFRQLCQEAFSSKDKK----- 106
H I+VI +GA M+YEA+N+AG + +K + L+ N Q Q +++ D+K
Sbjct: 242 HAIAVIGDGAITGGMAYEALNHAGFMKTDKMIVILNDNKQVSLPTQ--YNAGDQKPVGAL 299
Query: 107 --------------------QKFGGQM-HEIDAFSREIE--------AGSRACFFEDLGL 137
+ F QM I F++ ++ S A F+DL L
Sbjct: 300 AATLAEIQADPNLREIRETIKNFAEQMPAPIRDFAKAVDDVGHDILSQNSGAKLFKDLKL 359
Query: 138 YYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL-------- 189
+YIGPVDGH++ L VL+ VK PD G VLIH++TEK + P + R+
Sbjct: 360 WYIGPVDGHDVGLLVKVLQDVKKRPDMGPVLIHILTEKGRGYEPAETSMDRMHGVGKYDT 419
Query: 190 --------------FCKI----------LDNR-------MGGGTGLNLFQKHFPIRCFDV 218
+ + LD + MGGGTG+N F+K F R FDV
Sbjct: 420 KTGKALPSTSKSKSYTNVYADSLAAEAALDPKILAVHAAMGGGTGMNRFEKRFASRTFDV 479
Query: 219 GIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGA 278
GIAEQHAVTFAAGLA+EGLKPFCAIYS+FLQR FDQ+ HDV LQ LPVRFAIDR GLVGA
Sbjct: 480 GIAEQHAVTFAAGLASEGLKPFCAIYSTFLQRAFDQIIHDVALQNLPVRFAIDRGGLVGA 539
Query: 279 DGPTHCGAFDTTFMACLPNMVVM 301
DG TH G D T+MAC+PNMVVM
Sbjct: 540 DGATHGGFADVTYMACVPNMVVM 562
>gi|209886012|ref|YP_002289869.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
carboxidovorans OM5]
gi|337740417|ref|YP_004632145.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
carboxidovorans OM5]
gi|386029434|ref|YP_005950209.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
carboxidovorans OM4]
gi|209874208|gb|ACI94004.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
carboxidovorans OM5]
gi|336094502|gb|AEI02328.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
carboxidovorans OM4]
gi|336098081|gb|AEI05904.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
carboxidovorans OM5]
Length = 636
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/370 (43%), Positives = 208/370 (56%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +DAFG HSSTSISAGL GMAV RDL G NN
Sbjct: 92 IRTLRQGGGLSGFPKRAESEYDAFGTAHSSTSISAGL----------GMAVARDLQGGNN 141
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
+VI+VI +G+ A M+YEA+NNAG LN L + ++ R + +
Sbjct: 142 NVIAVIGDGSMSAGMAYEAMNNAGALNSRLIVILNDNDMSIAPPVGAMSAYLARLISSQT 201
Query: 100 FSS-----KDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+ + K Q+ H+ + ++R + AG FE+LGL+Y+GP+DGHNL+
Sbjct: 202 YGTAREILKTIAQRMPKFFHDRTLRAEEYARGMVAG--GMLFEELGLFYVGPIDGHNLDH 259
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL--------------------- 189
L VL V+ G VLIHV+T+K K P + R
Sbjct: 260 LLPVLTNVRD-SGTGPVLIHVVTKKGKGYAPAEESDDRYHGVVKFDVATGKQFKAKSNTP 318
Query: 190 -FCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+ + N M GGTG+++F K FP R FDVGIAEQHAVTFAAG
Sbjct: 319 SYTSVFGNSLVKEAQKDDKIVAITGAMPGGTGIDIFGKAFPDRTFDVGIAEQHAVTFAAG 378
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAAEG KPFCA+YS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADGPTH G+FD T+
Sbjct: 379 LAAEGYKPFCALYSTFLQRGYDQVVHDVAIQNLPVRFAIDRAGLVGADGPTHAGSFDNTY 438
Query: 292 MACLPNMVVM 301
+ CLPN ++M
Sbjct: 439 LGCLPNFIIM 448
>gi|224177807|gb|ACN38875.1| chloroplast 1-deoxy-D-xylulose 5-phosphate synthase [Linum
usitatissimum]
Length = 443
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/272 (55%), Positives = 176/272 (64%), Gaps = 46/272 (16%)
Query: 73 INNAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSR 128
I G L+ AL RL SN R+L + A K ++ GG MHE +D ++R + +GS
Sbjct: 31 IPPVGALSSALSRLQSNRPLRELREVA---KGVTKQIGGPMHELAAKVDEYARGMISGSG 87
Query: 129 ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA--- 178
+ FE+LGLYYIGPVDGH+++D+ +LK+VK+ G VLIHV+TEK EKA
Sbjct: 88 STLFEELGLYYIGPVDGHSIDDIVAILKEVKSTKATGPVLIHVVTEKGRGYPYAEKAADK 147
Query: 179 ------MLPLKLQQ----------TRLFCKI-------------LDNRMGGGTGLNLFQK 209
P QQ T F + + MGGGTGLN F +
Sbjct: 148 YHGVAKFDPATGQQFKSSAPTQSYTTYFAEALIAEAEADKDVVAIHAAMGGGTGLNQFLR 207
Query: 210 HFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFA 269
FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA
Sbjct: 208 RFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFA 267
Query: 270 IDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
+DRAGLVGADGPTHCGAFD TFMACLPNMVVM
Sbjct: 268 MDRAGLVGADGPTHCGAFDVTFMACLPNMVVM 299
>gi|347757576|ref|YP_004865138.1| 1-deoxy-D-xylulose-5-phosphate synthase [Micavibrio aeruginosavorus
ARL-13]
gi|347590094|gb|AEP09136.1| 1-deoxy-D-xylulose-5-phosphate synthase [Micavibrio aeruginosavorus
ARL-13]
Length = 629
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 168/379 (44%), Positives = 210/379 (55%), Gaps = 99/379 (26%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RD LGK+N
Sbjct: 94 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAGL----------GMAVARDQLGKDN 143
Query: 54 HVISVIVEGATIARMSYEAINNAG----------------------VLNKALKRLHSNPQ 91
HVI VI +G+ A M+YEA+NNAG L+K L RL S+ +
Sbjct: 144 HVICVIGDGSMTAGMAYEAMNNAGDAKSRLIVILNDNDMSIAPPVGALSKHLTRLVSSKR 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEI------DAFSREIEAGSRA----CFFEDLGLYYIG 141
+ Q ++ G ++ EI A R E+ A FE++G YYIG
Sbjct: 204 YMQ-----------ARETGKKVTEILPPPLRHAVKRAEESARTAMGTGSLFEEMGFYYIG 252
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------- 186
PVDGHNL+ L +++ ++ G VLIH IT+K K P +
Sbjct: 253 PVDGHNLDQLLPIMRNLRDGAHEGPVLIHAITKKGKGYAPAESSADKMHGVVKFDVVTGA 312
Query: 187 -----------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T++F + L D+R M GTGL+LF++ FP R FDVGIAE
Sbjct: 313 QHKSKPSAPAYTKVFAQSLIEEARHDSRIVAITGAMPSGTGLDLFEREFPDRMFDVGIAE 372
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGLKPFCAIYS+FLQR +DQV HDV +Q LPVRFA+DRAGLVGADG T
Sbjct: 373 QHAVTFAAGMATEGLKPFCAIYSTFLQRAYDQVVHDVCIQNLPVRFAMDRAGLVGADGST 432
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GAFD +M CLPNMV+M
Sbjct: 433 HAGAFDVAYMGCLPNMVLM 451
>gi|357385547|ref|YP_004900271.1| 1-deoxy-d-xylulose-5-phosphate synthase [Pelagibacterium
halotolerans B2]
gi|351594184|gb|AEQ52521.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pelagibacterium
halotolerans B2]
Length = 647
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/371 (43%), Positives = 203/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAVG DL G+
Sbjct: 94 IRTLRQKDGLSGFTKRGESEYDPFGAGHSSTSISAGL----------GMAVGSDLKGEKR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+V++VI +GA A M+YEA+NNAG ++ L +L S P
Sbjct: 144 NVVAVIGDGAISAGMAYEAMNNAGAMDARLIVILNDNDMSIAPPTGAMSAYLAKLVSGPA 203
Query: 92 FRQLCQEA--FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L A F + + + ++R G FE+LG YY+GP+DGHNL+
Sbjct: 204 YRGLRDAAKQFVDSVMPPFIKDKARKTEEYARGFWTG--GTLFEELGFYYVGPIDGHNLD 261
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------------------- 186
L VL+ V+ + G +LIHV+T+K K P +
Sbjct: 262 HLLPVLRNVRDA-ETGPILIHVVTQKGKGYAPAEESADKYHGVSKFNVITGAQAKAPSNA 320
Query: 187 ---TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T +F L M GGTG++ F KHFP R FDVGIAEQHAVTFAA
Sbjct: 321 PSYTSVFADSLIAEAQKDEAIVAITAAMPGGTGIDKFSKHFPERSFDVGIAEQHAVTFAA 380
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA EGLKPFC IYS+FLQR +DQV HDV +QKLPVRF IDRAG VGADGPTH G+FD T
Sbjct: 381 GLATEGLKPFCTIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGYVGADGPTHAGSFDIT 440
Query: 291 FMACLPNMVVM 301
++A LP+MVVM
Sbjct: 441 YLATLPSMVVM 451
>gi|298294378|ref|YP_003696317.1| deoxyxylulose-5-phosphate synthase [Starkeya novella DSM 506]
gi|296930889|gb|ADH91698.1| deoxyxylulose-5-phosphate synthase [Starkeya novella DSM 506]
Length = 640
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/370 (44%), Positives = 207/370 (55%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAV RDL G
Sbjct: 93 IRTLRQGGGLSGFTNRAESEYDPFGAGHSSTSISAGL----------GMAVARDLAGAQR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+V+ VI +GA A M+YEA+NNAG ++ L RL S P
Sbjct: 143 NVVCVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNDMSIAPPVGAMSAYLARLISGPT 202
Query: 92 FRQLCQEAFSSKDKKQKF-GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + A +F G + + + F+R G FE+LG YY+GP+DGHNL+
Sbjct: 203 YRTLRETAKQLTRGLPRFLGKKAAQAEEFARGFWTGG--TLFEELGFYYVGPIDGHNLDH 260
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------LQQ---------------- 186
L VL+ V+ P G VL+HV+T+K K P + +Q+
Sbjct: 261 LLPVLRNVRDAPT-GPVLVHVVTQKGKGYPPAEESADKYHGVQRFDVATGAQKKAASNAP 319
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D R M GTGL+LF + FP R FDVGIAEQHAVTFAAG
Sbjct: 320 TYTSVFAESLIDEARRDERIVAVTAAMPAGTGLDLFGQAFPERTFDVGIAEQHAVTFAAG 379
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQ+ HDV +Q+LPVRFA+DRAGLVGADG TH GAFD
Sbjct: 380 LATEGFKPFCAIYSTFLQRAYDQIVHDVAIQRLPVRFALDRAGLVGADGATHVGAFDIPM 439
Query: 292 MACLPNMVVM 301
+A LP MVVM
Sbjct: 440 LATLPGMVVM 449
>gi|383773560|ref|YP_005452626.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. S23321]
gi|381361684|dbj|BAL78514.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. S23321]
Length = 642
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/372 (43%), Positives = 211/372 (56%), Gaps = 85/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G NN
Sbjct: 94 IRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSISAGL----------GMAVARDLAGGNN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFSSKDKKQK-FGGQMHEIDAFSRE--IEAGSRACFFEDLGLYYIGPVDGHNL 148
+R L + A + K + + ++ +SR ++ G+ FE+LG YY+GP+DGHNL
Sbjct: 204 YRTLREAAKQINQRLPKVIANRANRVEEYSRGFMMDGGT---LFEELGFYYVGPIDGHNL 260
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR-------------------- 188
+ L VLK V+ + + G +L+HV+T+K K P + +
Sbjct: 261 DHLLPVLKNVRDM-ETGPILVHVVTQKGKGYGPAEASADKYHAVVKFDVATGTQAKSKPN 319
Query: 189 ------LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+F + L D++ M GTG+++F K FP R FDVGIAEQHAVTFA
Sbjct: 320 APAYQNVFGQSLVKEAEKDDKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFA 379
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 380 AGLATEGYKPFCAIYSTFLQRGYDQIVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDN 439
Query: 290 TFMACLPNMVVM 301
++ CLPNMV+M
Sbjct: 440 AYLGCLPNMVIM 451
>gi|85717532|ref|ZP_01048477.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter sp. Nb-311A]
gi|85695649|gb|EAQ33562.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter sp. Nb-311A]
Length = 642
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/370 (43%), Positives = 205/370 (55%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISA L GMAV RDL G N
Sbjct: 94 IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISASL----------GMAVARDLSGGKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + A K + + ++ +SR S FE+LG YY+GP+DGHNL+
Sbjct: 204 YRSLREAAKQLGKHLPKMIADRAERVEEYSRGFMTNS-GTLFEELGFYYVGPIDGHNLDH 262
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------------- 188
L VLK V+ + + G +L+HV+T+K K P + +
Sbjct: 263 LLPVLKNVRDMEN-GPILVHVVTQKGKGYPPAEAAADKYHAVVKFDVSTGAQSKSKPNAP 321
Query: 189 ----LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F + L D+R M GTG+++F K FP R FDVGIAEQHAVTFAAG
Sbjct: 322 AYQNVFGQSLVKEAEKDDRIVAITAAMPSGTGVDIFNKAFPERTFDVGIAEQHAVTFAAG 381
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD F
Sbjct: 382 LATEGFKPFCAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAF 441
Query: 292 MACLPNMVVM 301
+ CLPNMV+M
Sbjct: 442 LGCLPNMVIM 451
>gi|374341514|gb|AEZ35185.1| 1-deoxy-D-xylulose 5-phosphate synthase-I [Botryococcus braunii]
Length = 770
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 170/389 (43%), Positives = 213/389 (54%), Gaps = 103/389 (26%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +DAFG GHSSTSISA L GMAVGRDLLGK+N
Sbjct: 170 MHTIRQRDGLSGFTNRSESEYDAFGAGHSSTSISAAL----------GMAVGRDLLGKDN 219
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN------------KALKRLHSNPQ---------- 91
H I+VI +GA M+YEA+N+AG L + + L+ N Q
Sbjct: 220 HCIAVIGDGAITGGMAYEALNHAGFLGSEKIQGKGNNIGRTIVILNDNQQVSLPTQFNGE 279
Query: 92 -----------FRQLCQEAFSSKDKK---------QKFGGQMHEIDAFSREIEAGSRACF 131
Q+ + S+ K+ Q GGQ+ ++ + G F
Sbjct: 280 KQKPVGALADALSQVASKQLSNSAKEIVKQLPEPLQAVGGQLEKVVS-----TIGGNNTF 334
Query: 132 FEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAMLPL-- 182
F++LG+ ++GP+DGHN+EDL VL+ +K+ D G V++H++TEK EKA +
Sbjct: 335 FDELGVAHVGPIDGHNVEDLVNVLEWIKSQKDGGPVIVHILTEKGYGYEFAEKASDRMHG 394
Query: 183 -------KLQQTRLFCKIL----------------DNR-------MGGGTGLNLFQKHFP 212
+Q + K+ D R MGGGTG+N F K FP
Sbjct: 395 VAKYDVTSGKQVKSSSKVASYTTYFADSLIAEAERDGRVIGIHAAMGGGTGMNRFAKRFP 454
Query: 213 IRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDR 272
R FDVGIAEQHAVTFAAGLA EGL P CAIYSSFLQR +DQV HDV LQ LPVRFA+DR
Sbjct: 455 KRTFDVGIAEQHAVTFAAGLACEGLIPMCAIYSSFLQRAYDQVIHDVALQNLPVRFAMDR 514
Query: 273 AGLVGADGPTHCGAFDTTFMACLPNMVVM 301
AGLVGADG TH G D T+MAC+PNM+VM
Sbjct: 515 AGLVGADGATHSGFADVTYMACVPNMIVM 543
>gi|316932492|ref|YP_004107474.1| deoxyxylulose-5-phosphate synthase [Rhodopseudomonas palustris
DX-1]
gi|315600206|gb|ADU42741.1| deoxyxylulose-5-phosphate synthase [Rhodopseudomonas palustris
DX-1]
Length = 641
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 161/370 (43%), Positives = 206/370 (55%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ HD FG GHSSTSISAGL GMAV +L GK N
Sbjct: 94 IRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSISAGL----------GMAVASELAGKKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + K + + + +SR G FE+LG YY+GPVDGHNL+
Sbjct: 204 YRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGG-GTLFEELGFYYVGPVDGHNLDH 262
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------------- 188
L +L+ V+ D G LIHV+T+K K P + +
Sbjct: 263 LLPILQNVRD-ADTGPFLIHVVTQKGKGYGPAEAAADKYHAVVKFDIATGAQSKAKSNAP 321
Query: 189 ----LFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F + L D+++ G GTG+++F+K FP R FDVGIAEQHAVTFAAG
Sbjct: 322 SYQNVFGQSLVKEAEKDDKIVGITAAMPSGTGIDIFEKAFPKRTFDVGIAEQHAVTFAAG 381
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAGLVGADG TH G+FD +
Sbjct: 382 LATEGYKPFCAIYSTFLQRAYDQIVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDNAY 441
Query: 292 MACLPNMVVM 301
+ CLPNMV+M
Sbjct: 442 LGCLPNMVIM 451
>gi|39934029|ref|NP_946305.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
CGA009]
gi|192289449|ref|YP_001990054.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
TIE-1]
gi|81563891|sp|Q6NB76.1|DXS_RHOPA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|229836076|sp|B3QFY7.1|DXS_RHOPT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|39647877|emb|CAE26396.1| 1-D-deoxyxylulose 5-phosphate synthase [Rhodopseudomonas palustris
CGA009]
gi|192283198|gb|ACE99578.1| deoxyxylulose-5-phosphate synthase [Rhodopseudomonas palustris
TIE-1]
Length = 641
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 161/370 (43%), Positives = 206/370 (55%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ HD FG GHSSTSISAGL GMAV +L GK N
Sbjct: 94 IRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSISAGL----------GMAVASELAGKKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + K + + + +SR G FE+LG YY+GPVDGHNL+
Sbjct: 204 YRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGG-GTLFEELGFYYVGPVDGHNLDH 262
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------------- 188
L +L+ V+ D G LIHV+T+K K P + +
Sbjct: 263 LLPILQNVRD-ADTGPFLIHVVTQKGKGYGPAEAAADKYHAVVKFDIATGAQAKAKSNAP 321
Query: 189 ----LFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F + L D+++ G GTG+++F+K FP R FDVGIAEQHAVTFAAG
Sbjct: 322 SYQNVFGQSLVKEAQKDDKIVGITAAMPSGTGIDIFEKAFPKRTFDVGIAEQHAVTFAAG 381
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAGLVGADG TH G+FD +
Sbjct: 382 LATEGYKPFCAIYSTFLQRAYDQIVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDNAY 441
Query: 292 MACLPNMVVM 301
+ CLPNMV+M
Sbjct: 442 LGCLPNMVIM 451
>gi|154251237|ref|YP_001412061.1| 1-deoxy-D-xylulose-5-phosphate synthase [Parvibaculum
lavamentivorans DS-1]
gi|154155187|gb|ABS62404.1| deoxyxylulose-5-phosphate synthase [Parvibaculum lavamentivorans
DS-1]
Length = 650
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 163/373 (43%), Positives = 209/373 (56%), Gaps = 88/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSIS+GL GMAV RDL G N
Sbjct: 95 IRTLRQGDGLSGFTKRAESEYDPFGAAHSSTSISSGL----------GMAVARDLKGGTN 144
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+V++VI +GA A M+YEA+NNAG +N L RL S
Sbjct: 145 NVVAVIGDGAMSAGMAYEAMNNAGSMNSRLIIILNDNDMSIAPPVGAMSAYLARLLSGGA 204
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
+R + A K Q ++ E + ++R + G FE+LGLYY+GP+DGHN
Sbjct: 205 YRSMRHLA---KQLAQLLPKRLEESARRAEEYARGMATG--GTLFEELGLYYVGPIDGHN 259
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------------- 186
+ L VLK V+ + G +L+HV+T+K K P + +
Sbjct: 260 FDHLLPVLKNVRDAGE-GPILVHVVTQKGKGYAPAEAAEDKYHGVSKFDVVTGTQAKAQA 318
Query: 187 -----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T++F + L D++ M GGTGL+LF + FP R FDVGIAEQHAVTF
Sbjct: 319 NAPSYTKVFAESLIAHAEEDDKIVAITAAMPGGTGLDLFAQRFPGRTFDVGIAEQHAVTF 378
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLA EG KPF IYS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADGPTH G+FD
Sbjct: 379 AAGLATEGFKPFATIYSTFLQRAYDQVVHDVAIQRLPVRFAIDRAGLVGADGPTHAGSFD 438
Query: 289 TTFMACLPNMVVM 301
T++ACLP VVM
Sbjct: 439 VTYLACLPGFVVM 451
>gi|359793593|ref|ZP_09296338.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359250198|gb|EHK53724.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 637
Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 168/368 (45%), Positives = 211/368 (57%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMA+ RDL G+ N
Sbjct: 94 IRTLRAEGGLSGFTKRQESEYDPFGAAHSSTSISAGL----------GMAMARDLTGRKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
+VISVI +GA A M+YEA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 NVISVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPSGAMSAYLARLASGRA 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ +D A +R +E + FE+LG Y+IGP+DGHNLE L
Sbjct: 204 YMGFRDFGKKLTSYLGKRVDRAVTRAVEHARGYVTGGTMFEELGFYHIGPIDGHNLEHLV 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VL+ V+ D G VLIH++T+K K P +
Sbjct: 264 PVLRNVRDNGD-GPVLIHIVTQKGKGYAPAEAASDKYHGVNKFDVITGAQAKAPANAPSY 322
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D+R M GTGL+LF + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 323 TKVFAESLIQEARDDDRIVAITAAMPSGTGLDLFGEAFPSRTFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
EGLKPF AIYS+FLQR +DQV HDV +QKLPVRF IDRAG VGADGPTHCGAFDTT++A
Sbjct: 383 TEGLKPFVAIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGFVGADGPTHCGAFDTTYLA 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 SLPGFVVM 450
>gi|209963899|ref|YP_002296814.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum centenum
SW]
gi|226801550|sp|B6IRB5.1|DXS_RHOCS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|209957365|gb|ACI98001.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum centenum
SW]
Length = 642
Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 162/371 (43%), Positives = 206/371 (55%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG GHSSTSISA L GMAVGRD LG N
Sbjct: 94 IRTLRMGGGLSGFTKRAESEYDPFGAGHSSTSISAAL----------GMAVGRDQLGHKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKA----------------------LKRLHSNPQ 91
HVI VI +G+ A M+YEA+NNAG +N L RL S+ Q
Sbjct: 144 HVICVIGDGSISAGMAYEAMNNAGAMNSRMIVILNDNDMSIAPPVGAMSGYLSRLISSRQ 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
+R L + K ++ + E + E G + FE++G YY+GP+DGHNL+
Sbjct: 204 YRGLRE---LGKQVAERLPRPLQEAARRAEEYARGFVTGGTLFEEMGFYYVGPIDGHNLD 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------------------- 186
L VL+ ++ G VLIH +T+K + P +
Sbjct: 261 HLLPVLENIRDDQGTGPVLIHAVTQKGRGYGPAERSADKLHAVSKFDVITGAQAKAKANA 320
Query: 187 ---TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
TR+F L D+R M GTGL+LF+K FP R +DVGIAEQHAVTFAA
Sbjct: 321 PSYTRVFADSLIQEAEADSRVVAITAAMPSGTGLDLFEKRFPDRTYDVGIAEQHAVTFAA 380
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLAAEGLKPFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVG+DG TH G+FD
Sbjct: 381 GLAAEGLKPFCAIYSTFLQRAYDQVVHDVCIQNLPVRFAIDRAGLVGSDGCTHAGSFDVA 440
Query: 291 FMACLPNMVVM 301
++ C+PN+V+M
Sbjct: 441 YLGCVPNIVIM 451
>gi|91978764|ref|YP_571423.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
BisB5]
gi|123748724|sp|Q130G7.1|DXS_RHOPS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|91685220|gb|ABE41522.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
BisB5]
Length = 638
Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 160/370 (43%), Positives = 205/370 (55%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G NN
Sbjct: 91 IRTLRTAGGLSGFTKRTESDYDPFGAAHSSTSISAGL----------GMAVARDLAGGNN 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG +N L RL+S
Sbjct: 141 NVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAPPVGAMSAYLSRLYSGKT 200
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + K + + + +SR G FE+LG YY+GP+DGHNL+
Sbjct: 201 YRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGG-GTLFEELGFYYVGPIDGHNLDH 259
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------------- 188
L +L+ V+ + G LIHV+T+K K P + +
Sbjct: 260 LLPILQNVRD-AETGPFLIHVVTQKGKGYAPAEAASDKYHAVVKFDIATGTQAKAKSNAP 318
Query: 189 ----LFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F + L D+++ G GTG+++F+K FP R FDVGIAEQHAVTFAAG
Sbjct: 319 SYQNVFGQSLVKEAAKDDKIVGITAAMPSGTGIDIFEKAFPARTFDVGIAEQHAVTFAAG 378
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQV HDV LQ LPVRFAIDRAGLVGADG TH G+FD +
Sbjct: 379 LATEGYKPFCAIYSTFLQRAYDQVVHDVALQSLPVRFAIDRAGLVGADGATHAGSFDNAY 438
Query: 292 MACLPNMVVM 301
+ CLPNMV+M
Sbjct: 439 LGCLPNMVIM 448
>gi|153007892|ref|YP_001369107.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum anthropi ATCC
49188]
gi|166198634|sp|A6WWC4.1|DXS_OCHA4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|151559780|gb|ABS13278.1| deoxyxylulose-5-phosphate synthase [Ochrobactrum anthropi ATCC
49188]
Length = 638
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 168/374 (44%), Positives = 208/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQT GL E+ +D FG HSSTSISAGL GMAV DL G+
Sbjct: 93 IRTLRQTGGLSGFTKRTESEYDPFGAAHSSTSISAGL----------GMAVASDLSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGKT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAKKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L +LK V+ + G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPILKNVRDTQE-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQSKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D+R M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDRIVAITAAMPSGTGLDLFGEVFPQRTFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|404317422|ref|ZP_10965355.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum anthropi
CTS-325]
Length = 638
Score = 270 bits (689), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 168/374 (44%), Positives = 208/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQT GL E+ +D FG HSSTSISAGL GMAV DL G+
Sbjct: 93 IRTLRQTGGLSGFTKRTESEYDPFGAAHSSTSISAGL----------GMAVASDLSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGKT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAKKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L +LK V+ + G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPILKNVRDTQE-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQSKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D+R M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDRIVAITAAMPSGTGLDLFGEVFPQRTFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|365899110|ref|ZP_09437031.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
[Bradyrhizobium sp. STM 3843]
gi|365420205|emb|CCE09573.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
[Bradyrhizobium sp. STM 3843]
Length = 618
Score = 270 bits (689), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 209/372 (56%), Gaps = 85/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 71 IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGL----------GMAVARDLSGGTN 120
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 121 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 180
Query: 92 FRQLCQEAFSSKDKKQK-FGGQMHEIDAFSRE--IEAGSRACFFEDLGLYYIGPVDGHNL 148
+R L + A K + ++ +SR ++ G+ FE+LG YY+GP+DGHNL
Sbjct: 181 YRTLREAAKQLGQHLPKVIANRASRVEEYSRGFMMDGGT---LFEELGFYYVGPIDGHNL 237
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------------------ 184
+ L VLK V+ + + G +L+HV+T+K K P +
Sbjct: 238 DHLLPVLKNVRDM-ETGPILVHVVTQKGKGYPPAEASADKYHAVAKFDVATGTQAKAKPN 296
Query: 185 --QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
Q +F + L D++ M GTG+++F K FP R FDVGIAEQHAVTFA
Sbjct: 297 APQYQNVFGQSLVKQAEKDDKIIGITAAMPSGTGIDIFAKAFPKRTFDVGIAEQHAVTFA 356
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAAEG KPFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 357 AGLAAEGYKPFCAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDN 416
Query: 290 TFMACLPNMVVM 301
++ CLPNMV+M
Sbjct: 417 AYLGCLPNMVIM 428
>gi|407975808|ref|ZP_11156711.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratireductor indicus
C115]
gi|407428669|gb|EKF41350.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratireductor indicus
C115]
Length = 638
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 168/368 (45%), Positives = 208/368 (56%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL G+
Sbjct: 94 IRTLRQEGGLYGFTKRTESEYDPFGTAHSSTSISAGL----------GMAVARDLKGERR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
+VI+VI +GA A M+YEA+NNAG L+ + + L+ N Q A S+ + G
Sbjct: 144 NVIAVIGDGALSAGMAYEAMNNAGSLDARLIVILNDNDMSIAPPQGAMSAYLARLASGRA 203
Query: 113 MHEIDAFSREIEAG---------SRA-----------CFFEDLGLYYIGPVDGHNLEDLA 152
+ +++ A +RA FE++G ++IGP+DGHNL L
Sbjct: 204 YQGVRELGKKLTAALGKGVDRAVTRAVEHARGYVTGGTLFEEMGFFHIGPIDGHNLRHLV 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VLK V+ + G VLIHV+T+K K P + +
Sbjct: 264 PVLKNVRDHGN-GPVLIHVVTKKGKGYAPAEAAEDKYHGVNRFDVITGAQAKAPANAPSY 322
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D R M GTGL+LF K FP R FDVGIAEQHAVTFAAGLA
Sbjct: 323 TKVFAQSLIAEAREDERVVAVTAAMPSGTGLDLFGKEFPERTFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
EGLKPF AIYS+FLQR +DQV HDV LQ LPVRFAIDRAG VGADGPTHCGAFD T++A
Sbjct: 383 TEGLKPFVAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGYVGADGPTHCGAFDVTYLA 442
Query: 294 CLPNMVVM 301
LPNMVVM
Sbjct: 443 SLPNMVVM 450
>gi|90422661|ref|YP_531031.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
BisB18]
gi|118595613|sp|Q21A74.1|DXS_RHOPB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|90104675|gb|ABD86712.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
BisB18]
Length = 641
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 162/370 (43%), Positives = 205/370 (55%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 94 IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGL----------GMAVARDLAGGKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + K + + + +SR G FE+LG YY+GPVDGHNL+
Sbjct: 204 YRTLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGG-GTLFEELGFYYVGPVDGHNLDH 262
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------------- 188
L +L+ V+ D G LIHV+T+K K P + +
Sbjct: 263 LLPILQNVRD-ADTGPFLIHVVTQKGKGYGPAEAASDKYHAVVKFDIATGAQAKAKSNAP 321
Query: 189 ----LFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F + L D+++ G GTG+++F+K FP R FDVGIAEQHAVTFAAG
Sbjct: 322 SYQNVFGQSLVKEAQKDDKIVGITAAMPSGTGIDIFEKAFPTRTFDVGIAEQHAVTFAAG 381
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAAEG KPFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD F
Sbjct: 382 LAAEGYKPFCAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAF 441
Query: 292 MACLPNMVVM 301
+ CLPNMV+M
Sbjct: 442 LGCLPNMVIM 451
>gi|299134745|ref|ZP_07027937.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2]
gi|298590555|gb|EFI50758.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2]
Length = 638
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 159/370 (42%), Positives = 206/370 (55%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +DAFG HSSTSISAGL GMAV RDL NN
Sbjct: 94 IRTLRQGGGLSGFPKRAESEYDAFGTAHSSTSISAGL----------GMAVARDLQQGNN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
+VI+VI +G+ A M+YEA+NNAG LN L + ++ R + +
Sbjct: 144 NVIAVIGDGSMSAGMAYEAMNNAGALNSRLIVILNDNDMSIAPPVGAMSAYLARLISSQT 203
Query: 100 FSSKDKKQK---------FGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+ + + K F + + ++R + AG FE+LG++Y+GP+DGHNL+
Sbjct: 204 YGTAREILKNIAHRMPKFFEDRTLRAEEYARGMVAG--GMLFEELGMFYVGPIDGHNLDH 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL--------------------- 189
L VL V+ G VLIHV+T+K K P + R
Sbjct: 262 LLPVLTNVRD-NGTGPVLIHVVTKKGKGYAPAEESDDRYHGVVKFDVATGKQFKTKSNAP 320
Query: 190 -FCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+ + N M GGTG+++F K FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTSVFGNSLTKEAQKDDKIVAITGAMPGGTGVDIFAKSFPERTFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCA+YS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADGPTH GAFD T+
Sbjct: 381 LATEGYKPFCALYSTFLQRGYDQVVHDVAIQNLPVRFAIDRAGLVGADGPTHAGAFDNTY 440
Query: 292 MACLPNMVVM 301
+ CLPN+++M
Sbjct: 441 LGCLPNLIIM 450
>gi|456356899|dbj|BAM91344.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agromonas oligotrophica
S58]
Length = 641
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 161/376 (42%), Positives = 211/376 (56%), Gaps = 93/376 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 94 IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGL----------GMAVARDLAGGKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDA-FSREIEAGSRA------CFFEDLGLYYIGPVD 144
+R L +D ++ G + ++ A + +E SR FE+LG YY+GP+D
Sbjct: 204 YRTL-------RDAAKQLGQHLPKVIANRASRVEEYSRGFMMDGGTLFEELGFYYVGPID 256
Query: 145 GHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------- 188
GHNL+ L VLK V+ + + G +L+HV+T+K K P + +
Sbjct: 257 GHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYSPAEAAADKYHAVAKFDIATGTQAK 315
Query: 189 ----------LFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHA 225
+F + L D+++ G GTG+++F K FP R FDVGIAEQHA
Sbjct: 316 AKPNAPAYQNVFGQSLVKEAEKDDKIVGITAAMPSGTGIDIFAKAFPKRTFDVGIAEQHA 375
Query: 226 VTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCG 285
VTFAAGLA+EG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G
Sbjct: 376 VTFAAGLASEGYKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAG 435
Query: 286 AFDTTFMACLPNMVVM 301
+FD ++ CLPNMV+M
Sbjct: 436 SFDNAYLGCLPNMVIM 451
>gi|75674831|ref|YP_317252.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter winogradskyi
Nb-255]
gi|118595594|sp|Q3SUZ1.1|DXS_NITWN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|74419701|gb|ABA03900.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter winogradskyi
Nb-255]
Length = 666
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 200/370 (54%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISA L GMAV RDL G NN
Sbjct: 118 IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISASL----------GMAVARDLSGGNN 167
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 168 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 227
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + A K + + ++ +SR S FE+LG YY+GP+DGHNL+
Sbjct: 228 YRSLREAAKQLGKHLPKMIADRAERVEEYSRGFMTNS-GTLFEELGFYYVGPIDGHNLDH 286
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRLFCKI----------------- 193
L VLK V+ + + G +L+HV+T+K K P + + +
Sbjct: 287 LLPVLKNVRDMEN-GPILVHVVTQKGKGYPPAEAAADKYHAVVKFDISTGAQSKSKPNAP 345
Query: 194 ----------------------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+ M GTG+++F FP R FDVGIAEQHAVTFAAG
Sbjct: 346 SYQNVFGASLVKEAEKDDKIVAITAAMPSGTGVDIFNNAFPERTFDVGIAEQHAVTFAAG 405
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD F
Sbjct: 406 LATEGFKPFCAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAF 465
Query: 292 MACLPNMVVM 301
+ CLPNMV+M
Sbjct: 466 LGCLPNMVIM 475
>gi|27377762|ref|NP_769291.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum
USDA 110]
gi|41016964|sp|Q89RW1.1|DXS_BRAJA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|27350907|dbj|BAC47916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum
USDA 110]
Length = 661
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/372 (42%), Positives = 206/372 (55%), Gaps = 85/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 113 IRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSISAGL----------GMAVARDLSGGKN 162
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 163 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 222
Query: 92 FRQLCQEAFSSKDKKQKF-GGQMHEIDAFSRE--IEAGSRACFFEDLGLYYIGPVDGHNL 148
+R L + A + K + + ++ +SR ++ G+ FE+LG YY+GP+DGHNL
Sbjct: 223 YRTLREAAKQINKRLPKIIANRANRVEEYSRGFMMDGGT---LFEELGFYYVGPIDGHNL 279
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRLFCKI--------------- 193
+ L VLK V+ + + G +L+HV+T+K K P + + +
Sbjct: 280 DHLLPVLKNVRDMEE-GPILVHVVTQKGKGYGPAEASADKYHAVVKFDVATGTQAKAKPN 338
Query: 194 ------------------------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+ M GTG+++F K FP R FDVGIAEQHAVTFA
Sbjct: 339 APAYQNVFGQSLVKEAQKDEKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFA 398
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA+EG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 399 AGLASEGYKPFCAIYSTFLQRGYDQIVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDN 458
Query: 290 TFMACLPNMVVM 301
++ CLPNMV+M
Sbjct: 459 AYLGCLPNMVIM 470
>gi|384220819|ref|YP_005611985.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum
USDA 6]
gi|354959718|dbj|BAL12397.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum
USDA 6]
Length = 642
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/372 (43%), Positives = 210/372 (56%), Gaps = 85/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 94 IRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSISAGL----------GMAVARDLSGGKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFSSKDKKQKF-GGQMHEIDAFSRE--IEAGSRACFFEDLGLYYIGPVDGHNL 148
+R L A + K + + ++ +SR ++ G+ FE+LG YY+GP+DGHNL
Sbjct: 204 YRTLRDAAKQINKRLPKIIANRANRVEEYSRGFMMDGGT---LFEELGFYYVGPIDGHNL 260
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR-------------------- 188
+ L VLK V+ + + G +L+HV+T+K K P + +
Sbjct: 261 DHLLPVLKNVRDM-ETGPILVHVVTQKGKGYGPAEASADKYHAVVKFDVATGTQAKAKPN 319
Query: 189 ------LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+F + L D++ M GTG+++F K FP R FDVGIAEQHAVTFA
Sbjct: 320 APAYQNVFGQSLVKEAQKDDKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFA 379
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA+EG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 380 AGLASEGYKPFCAIYSTFLQRGYDQIVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDN 439
Query: 290 TFMACLPNMVVM 301
++ CLPNMV+M
Sbjct: 440 AYLGCLPNMVIM 451
>gi|398821070|ref|ZP_10579560.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. YR681]
gi|398228267|gb|EJN14399.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. YR681]
Length = 642
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/372 (43%), Positives = 209/372 (56%), Gaps = 85/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 94 IRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSISAGL----------GMAVARDLAGGKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFSSKDKKQK-FGGQMHEIDAFSRE--IEAGSRACFFEDLGLYYIGPVDGHNL 148
+R L A + K + + ++ +SR ++ G+ FE+LG YY+GP+DGHNL
Sbjct: 204 YRTLRDAAKQINKRLPKILANRANRVEEYSRGFMMDGGT---LFEELGFYYVGPIDGHNL 260
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR-------------------- 188
+ L VLK V+ + + G +L+HV+T+K K P + +
Sbjct: 261 DHLLPVLKNVRDM-ETGPILVHVVTQKGKGYGPAEASADKYHAVVKFDVATGTQAKSKPN 319
Query: 189 ------LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+F + L D++ M GTG+++F K FP R FDVGIAEQHAVTFA
Sbjct: 320 APAYQNVFGQSLVKEAEKDDKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFA 379
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 380 AGLATEGYKPFCAIYSTFLQRGYDQIVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDN 439
Query: 290 TFMACLPNMVVM 301
++ CLPNMV+M
Sbjct: 440 AYLGCLPNMVIM 451
>gi|148253965|ref|YP_001238550.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. BTAi1]
gi|259645379|sp|A5EEQ0.1|DXS_BRASB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|146406138|gb|ABQ34644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. BTAi1]
Length = 641
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/376 (43%), Positives = 210/376 (55%), Gaps = 93/376 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 94 IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGL----------GMAVARDLSGGKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDA-FSREIEAGSRA------CFFEDLGLYYIGPVD 144
+R L +D ++ G + ++ A + +E SR FE+LG YY+GP+D
Sbjct: 204 YRTL-------RDAAKQLGQHLPKVIANRASRVEEYSRGFMMDGGTLFEELGFYYVGPID 256
Query: 145 GHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------- 188
GHNL+ L VLK V+ + + G +L+HV+T+K K P + +
Sbjct: 257 GHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYPPAEASADKYHAVVKFDVATGTQAK 315
Query: 189 ----------LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHA 225
+F + L D++ M GTG+++F K FP R FDVGIAEQHA
Sbjct: 316 AKPNAPAYQNVFGQSLVKEAEKDDKVVGITAAMPSGTGIDIFAKAFPKRTFDVGIAEQHA 375
Query: 226 VTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCG 285
VTFAAGLAAEG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G
Sbjct: 376 VTFAAGLAAEGFKPFCAIYSTFLQRGYDQIVHDVCIQSLPVRFAIDRAGLVGADGATHAG 435
Query: 286 AFDTTFMACLPNMVVM 301
+FD ++ CLPNMV+M
Sbjct: 436 SFDNAYLGCLPNMVIM 451
>gi|414163144|ref|ZP_11419391.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia felis ATCC 53690]
gi|410880924|gb|EKS28764.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia felis ATCC 53690]
Length = 638
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 165/372 (44%), Positives = 206/372 (55%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL G NN
Sbjct: 92 IRTLRQGGGLSGFTKRAESEYDCFGTAHSSTSISAGL----------GMAVARDLSGGNN 141
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG ++ L RL S+
Sbjct: 142 NVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNEMSIAPPVGAMSSYLSRLTSSNT 201
Query: 92 FRQLCQEAFSSKDKKQKF---GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+R L + + KF G Q E ++R + +G FE+LG YY+GP+DGHNL
Sbjct: 202 YRSLREIGKQVAKRLPKFVEKGAQRAE--EYARGMLSG--GTLFEELGFYYVGPIDGHNL 257
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEK-----------------------------EKAM 179
+ L VLK V+ G LIHV+TEK KA
Sbjct: 258 DHLLPVLKNVRD-SKVGPTLIHVVTEKGKGYSHAETAKDKYHGVVKFDVATGKQDKAKAN 316
Query: 180 LP----------LKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
P +KL + + M GTG+++FQK +P R FDVGIAEQHAVTFA
Sbjct: 317 APSYTSVFGNALVKLAEKDEKIIGITAAMPSGTGVDIFQKVYPERTFDVGIAEQHAVTFA 376
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EG+KPF AIYS+FLQR +DQV HDV +QKLPVRF IDRAGLVGADGPTH G+FD
Sbjct: 377 AGLATEGMKPFVAIYSTFLQRAYDQVVHDVAIQKLPVRFVIDRAGLVGADGPTHAGSFDL 436
Query: 290 TFMACLPNMVVM 301
++ CLP+MV+M
Sbjct: 437 AYLGCLPDMVIM 448
>gi|367474105|ref|ZP_09473631.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
[Bradyrhizobium sp. ORS 285]
gi|365273603|emb|CCD86099.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
[Bradyrhizobium sp. ORS 285]
Length = 641
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 161/376 (42%), Positives = 211/376 (56%), Gaps = 93/376 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 94 IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGL----------GMAVARDLSGGKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDA-FSREIEAGSRA------CFFEDLGLYYIGPVD 144
+R L +D ++ G + ++ A + +E SR FE+LG YY+GP+D
Sbjct: 204 YRTL-------RDAAKQLGQHLPKVIANRASRVEEYSRGFMMDGGTLFEELGFYYVGPID 256
Query: 145 GHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------- 188
GHNL+ L VLK V+ + + G +L+HV+T+K K P + +
Sbjct: 257 GHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYSPAEAAADKYHAVAKFDIATGTQAK 315
Query: 189 ----------LFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHA 225
+F + L D+++ G GTG+++F K FP R FDVGIAEQHA
Sbjct: 316 AKPNAPAYQNVFGQSLVKEAEKDDKIVGITAAMPSGTGIDIFAKAFPKRTFDVGIAEQHA 375
Query: 226 VTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCG 285
VTFAAGLA+EG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G
Sbjct: 376 VTFAAGLASEGYKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAG 435
Query: 286 AFDTTFMACLPNMVVM 301
+FD ++ CLPNMV+M
Sbjct: 436 SFDNAYLGCLPNMVIM 451
>gi|239831304|ref|ZP_04679633.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum intermedium
LMG 3301]
gi|444308786|ref|ZP_21144428.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum intermedium
M86]
gi|239823571|gb|EEQ95139.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum intermedium
LMG 3301]
gi|443487834|gb|ELT50594.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum intermedium
M86]
Length = 638
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 168/374 (44%), Positives = 210/374 (56%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQT GL E+ +D FG HSSTSISAGL GMAV DL G+
Sbjct: 93 IRTLRQTGGLSGFTKRSESEYDPFGAAHSSTSISAGL----------GMAVASDLSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGKT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAKKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------QQ---- 186
NL+ L +LK V+ + G VLIHV+T+K K P + QQ
Sbjct: 257 NLDHLLPILKNVRDTQE-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGQQSKPP 315
Query: 187 ------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAITAAMPSGTGLDLFGEVFPQRTFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGFKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F++ LP VVM
Sbjct: 436 DTGFLSALPGFVVM 449
>gi|414163311|ref|ZP_11419558.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia felis ATCC 53690]
gi|410881091|gb|EKS28931.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia felis ATCC 53690]
Length = 638
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 206/370 (55%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +DAFG HSSTSISAGL GMAV RDL NN
Sbjct: 94 IRTLRQGGGLSGFPKRAESEYDAFGTAHSSTSISAGL----------GMAVARDLQQGNN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
+VI+VI +G+ A M+YEA+NNAG LN L + ++ R + E
Sbjct: 144 NVIAVIGDGSMSAGMAYEAMNNAGALNSRLIVILNDNDMSIAPPVGAMSAYLARLISSET 203
Query: 100 FSSKDKKQK---------FGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+ + + K F + + ++R + AG FE+LG++Y+GP+DGHNL+
Sbjct: 204 YGTAREILKNIAHRMPKFFQDRTLRAEEYARGMVAG--GMLFEELGMFYVGPIDGHNLDH 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL--------------------- 189
L VL V+ G VLIHV+T+K K P + +
Sbjct: 262 LLPVLTNVRD-NGTGPVLIHVVTKKGKGYAPAEESDDKYHGVVKFDVATGKQFKTKSNAP 320
Query: 190 -FCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+ + N M GGTG+++F K FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTSVFGNSLTKEAQKDDKIVAITGAMPGGTGVDIFAKSFPERTFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCA+YS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADGPTH G+FD T+
Sbjct: 381 LATEGYKPFCALYSTFLQRGYDQVVHDVAIQNLPVRFAIDRAGLVGADGPTHAGSFDNTY 440
Query: 292 MACLPNMVVM 301
+ CLPN+++M
Sbjct: 441 LGCLPNLIIM 450
>gi|398829536|ref|ZP_10587733.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phyllobacterium sp. YR531]
gi|398216463|gb|EJN03009.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phyllobacterium sp. YR531]
Length = 639
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 168/370 (45%), Positives = 202/370 (54%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV DL G
Sbjct: 94 IRTLRQEGGLSGFTKRSESDYDPFGAAHSSTSISAGL----------GMAVASDLAGIKR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+V+SVI +GA A M+YEA+NNAG L+ L RL S
Sbjct: 144 NVVSVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGKA 203
Query: 92 FRQLCQEAFSSKDKKQKF-GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R + A K KF + + ++R G FE+LG YY+GP+DGHNL+
Sbjct: 204 YRSFRETAKQLAKKLPKFLQEKARRSEEYARAFWTG--GTMFEELGFYYVGPIDGHNLDH 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VLK V+ D G VLIHV+T+K K P +
Sbjct: 262 LLPVLKNVRDTMD-GPVLIHVVTQKGKGYAPAEASADKYHGVNKFDVITGAQAKPPANAP 320
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T++F L D+R M GGTGL+LF + FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTKIFATSLIEEARHDDRIVAVTAAMPGGTGLDLFGEVFPDRTFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA+EGLKPF AIYS+FLQR +DQV HDV LQ LPVRF IDRAGLVGADG TH G+FDT F
Sbjct: 381 LASEGLKPFAAIYSTFLQRGYDQVVHDVSLQNLPVRFPIDRAGLVGADGATHAGSFDTGF 440
Query: 292 MACLPNMVVM 301
+A LP VVM
Sbjct: 441 LAALPGFVVM 450
>gi|365881074|ref|ZP_09420405.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
[Bradyrhizobium sp. ORS 375]
gi|365290782|emb|CCD92936.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
[Bradyrhizobium sp. ORS 375]
Length = 641
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/376 (43%), Positives = 210/376 (55%), Gaps = 93/376 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 94 IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGL----------GMAVARDLSGGKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDA-FSREIEAGSRA------CFFEDLGLYYIGPVD 144
+R L +D ++ G + ++ A + +E SR FE+LG YY+GP+D
Sbjct: 204 YRTL-------RDAAKQLGQHLPKVIANRASRVEEYSRGFMMDGGTLFEELGFYYVGPID 256
Query: 145 GHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------- 188
GHNL+ L VLK V+ + + G +L+HV+T+K K P + +
Sbjct: 257 GHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYSPAEAAADKYHAVAKFDIATGTQAK 315
Query: 189 ----------LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHA 225
+F + L D++ M GTG+++F K FP R FDVGIAEQHA
Sbjct: 316 AKPNAPAYQNVFGQSLVKEAEKDDKVVGITAAMPSGTGIDIFAKAFPKRTFDVGIAEQHA 375
Query: 226 VTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCG 285
VTFAAGLAAEG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G
Sbjct: 376 VTFAAGLAAEGYKPFCAIYSTFLQRGYDQIVHDVCIQSLPVRFAIDRAGLVGADGATHAG 435
Query: 286 AFDTTFMACLPNMVVM 301
+FD ++ CLPNMV+M
Sbjct: 436 SFDNAYLGCLPNMVIM 451
>gi|299133455|ref|ZP_07026649.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2]
gi|298591291|gb|EFI51492.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2]
Length = 638
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 164/372 (44%), Positives = 206/372 (55%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL G NN
Sbjct: 92 IRTLRQGGGLSGFTKRAESEYDCFGTAHSSTSISAGL----------GMAVARDLSGANN 141
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG ++ L RL S+
Sbjct: 142 NVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNEMSIAPPVGAMSSYLSRLTSSNT 201
Query: 92 FRQLCQEAFSSKDKKQKF---GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+R L + + KF G Q E ++R + +G FE+LG YY+GP+DGHNL
Sbjct: 202 YRSLREIGKQVAKRLPKFVEKGAQRAE--EYARGMLSG--GTLFEELGFYYVGPIDGHNL 257
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEK-----------------------------EKAM 179
+ L VLK V+ G LIHV+T+K KA
Sbjct: 258 DHLLPVLKNVRD-SKVGPTLIHVVTQKGKGYSHAETAKDKYHGVVKFDVATGKQNKAKAN 316
Query: 180 LP----------LKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
P +KL + + M GTG+++FQK +P R FDVGIAEQHAVTFA
Sbjct: 317 APSYTSVFGNALVKLAEKDEKIIGITAAMPSGTGIDIFQKVYPERTFDVGIAEQHAVTFA 376
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EG+KPF AIYS+FLQR +DQV HDV +QKLPVRF IDRAGLVGADGPTH G+FD
Sbjct: 377 AGLATEGMKPFVAIYSTFLQRAYDQVVHDVAIQKLPVRFVIDRAGLVGADGPTHAGSFDL 436
Query: 290 TFMACLPNMVVM 301
++ CLP+MV+M
Sbjct: 437 AYLGCLPDMVIM 448
>gi|146339201|ref|YP_001204249.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. ORS
278]
gi|259645380|sp|A4YQ36.1|DXS_BRASO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|146192007|emb|CAL76012.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
[Bradyrhizobium sp. ORS 278]
Length = 641
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 162/376 (43%), Positives = 210/376 (55%), Gaps = 93/376 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 94 IRTLRTGGGLSGFTKRAESDYDPFGAAHSSTSISAGL----------GMAVARDLSGGKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDA-FSREIEAGSRA------CFFEDLGLYYIGPVD 144
+R L +D ++ G + ++ A + +E SR FE+LG YY+GP+D
Sbjct: 204 YRTL-------RDAAKQLGQHLPKVIANRASRVEEYSRGFMMDGGTLFEELGFYYVGPID 256
Query: 145 GHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------- 188
GHNL+ L VLK V+ + + G +L+HV+T+K K P + +
Sbjct: 257 GHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYSPAEAAADKYHAVAKFDIATGTQAK 315
Query: 189 ----------LFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHA 225
+F + L D ++ G GTG+++F K FP R FDVGIAEQHA
Sbjct: 316 AKPNAPAYQNVFGQSLVKEAEKDEKIVGITAAMPSGTGIDIFAKAFPKRTFDVGIAEQHA 375
Query: 226 VTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCG 285
VTFAAGLAAEG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G
Sbjct: 376 VTFAAGLAAEGYKPFCAIYSTFLQRGYDQIVHDVCIQSLPVRFAIDRAGLVGADGATHAG 435
Query: 286 AFDTTFMACLPNMVVM 301
+FD ++ CLPNMV+M
Sbjct: 436 SFDNAYLGCLPNMVIM 451
>gi|386397241|ref|ZP_10082019.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp.
WSM1253]
gi|385737867|gb|EIG58063.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp.
WSM1253]
Length = 642
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 160/372 (43%), Positives = 209/372 (56%), Gaps = 85/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 94 IRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSISAGL----------GMAVARDLSGGKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFSSKDKKQK-FGGQMHEIDAFSRE--IEAGSRACFFEDLGLYYIGPVDGHNL 148
+R L A + K + + ++ +SR ++ G+ FE+LG YY+GP+DGHNL
Sbjct: 204 YRTLRDVAKQINQRLPKILANRANRVEEYSRGFMMDGGT---LFEELGFYYVGPIDGHNL 260
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR-------------------- 188
+ L VLK V+ + + G +L+HV+T+K K P + +
Sbjct: 261 DHLLPVLKNVRDM-ETGPILLHVVTQKGKGYGPAEASADKYHAVVKFDVATGTQAKSKPN 319
Query: 189 ------LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+F + L D++ M GTG+++F K FP R FDVGIAEQHAVTFA
Sbjct: 320 APAYQNVFGQSLVKEAEKDDKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFA 379
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 380 AGLATEGYKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDN 439
Query: 290 TFMACLPNMVVM 301
++ CLPNMV+M
Sbjct: 440 AYLGCLPNMVIM 451
>gi|374573936|ref|ZP_09647032.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. WSM471]
gi|374422257|gb|EHR01790.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. WSM471]
Length = 642
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 160/372 (43%), Positives = 209/372 (56%), Gaps = 85/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 94 IRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSISAGL----------GMAVARDLSGGKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFSSKDKKQK-FGGQMHEIDAFSRE--IEAGSRACFFEDLGLYYIGPVDGHNL 148
+R L A + K + + ++ +SR ++ G+ FE+LG YY+GP+DGHNL
Sbjct: 204 YRTLRDVAKQINQRLPKILANRANRVEEYSRGFMMDGGT---LFEELGFYYVGPIDGHNL 260
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR-------------------- 188
+ L VLK V+ + + G +L+HV+T+K K P + +
Sbjct: 261 DHLLPVLKNVRDM-ETGPILLHVVTQKGKGYGPAEASADKYHAVVKFDVATGTQAKSKPN 319
Query: 189 ------LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+F + L D++ M GTG+++F K FP R FDVGIAEQHAVTFA
Sbjct: 320 APAYQNVFGQSLVKEAEKDDKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFA 379
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 380 AGLATEGYKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDN 439
Query: 290 TFMACLPNMVVM 301
++ CLPNMV+M
Sbjct: 440 AYLGCLPNMVIM 451
>gi|392377749|ref|YP_004984908.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum brasilense
Sp245]
gi|356879230|emb|CCD00134.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum brasilense
Sp245]
Length = 643
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 159/372 (42%), Positives = 203/372 (54%), Gaps = 85/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+V+D FG HSST++SAGL GMAV RD LG+ N
Sbjct: 97 IRTLRTGGGLSGFTRRTESVYDPFGAAHSSTAMSAGL----------GMAVARDRLGRRN 146
Query: 54 HVISVIVEGATIARMSYEAINN----------------------AGVLNKALKRLHSNPQ 91
HV++V+ +GA A M+YEA+NN G L+ L RL S+
Sbjct: 147 HVVAVVGDGAMSAGMAYEAMNNIGSGDSRVIVVLNDNNMSIAPPVGALSAYLSRLISSKP 206
Query: 92 F---RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
F R ++ + + + E ++R + G FE++G YYIGP+DGHNL
Sbjct: 207 FLTLRHFAEDLAGHMPRPLRTAARRAE--EYARGMVTG--GTLFEEMGFYYIGPIDGHNL 262
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
+ L VL+ V+ D VLIHV+T+K K P +
Sbjct: 263 DHLLPVLQNVRDAGDDKPVLIHVVTKKGKGYGPAEASADKLHAVAKFDVVTGAQSKPKSN 322
Query: 187 ----TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
TR+F L M GTGL+LF + FP RCFDVGIAEQHAVTFA
Sbjct: 323 APTYTRVFANALIAEAERDPGVLAITAAMPSGTGLDLFGQRFPDRCFDVGIAEQHAVTFA 382
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EG KPFCAIYS+FLQR +DQV HDV LQ+LPVRFA+DRAGLVGADG TH GAFD
Sbjct: 383 AGLATEGFKPFCAIYSTFLQRAYDQVVHDVVLQRLPVRFALDRAGLVGADGATHAGAFDV 442
Query: 290 TFMACLPNMVVM 301
++ CLP++V+M
Sbjct: 443 AYLGCLPDIVLM 454
>gi|337270073|ref|YP_004614128.1| deoxyxylulose-5-phosphate synthase [Mesorhizobium opportunistum
WSM2075]
gi|336030383|gb|AEH90034.1| deoxyxylulose-5-phosphate synthase [Mesorhizobium opportunistum
WSM2075]
Length = 637
Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 168/368 (45%), Positives = 206/368 (55%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA RDL G N
Sbjct: 94 IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAAARDLSGGRN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
+VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ + G
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGKA 203
Query: 113 MHEIDAFSREIEA--GSRA------------------CFFEDLGLYYIGPVDGHNLEDLA 152
+ F +++ + G RA FE+LG Y+IGP+DGHNLE L
Sbjct: 204 YAGLRDFGKKLTSYLGKRADRAITRAVEHARGYVTGGTLFEELGFYHIGPIDGHNLEHLI 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VLK V+ + G VLIHV+T+K K P +
Sbjct: 264 PVLKNVRDNGE-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGTQAKAPANAPAY 322
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D+R M GGTGL+LF + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 323 TKVFAESLIQEAREDDRIVAVTAAMPGGTGLDLFGEVFPARTFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
EG KPF AIYS+FLQR +DQV HDV +QKLPVRF IDRAG VGADG THCGAFDTTF+A
Sbjct: 383 TEGYKPFAAIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGFVGADGATHCGAFDTTFLA 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 SLPGFVVM 450
>gi|407777509|ref|ZP_11124778.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratireductor pacificus
pht-3B]
gi|407300758|gb|EKF19881.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratireductor pacificus
pht-3B]
Length = 640
Score = 266 bits (680), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 165/368 (44%), Positives = 207/368 (56%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL G+
Sbjct: 96 IRTLRQEGGLYGFTKRAESEYDPFGTAHSSTSISAGL----------GMAVARDLRGEKR 145
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
+VI+VI +GA A M+YEA+NNAG L+ + + L+ N Q A S+ + G
Sbjct: 146 NVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPQGAMSAYLARLASGRT 205
Query: 113 MHEIDAFSREI---------EAGSRA-----------CFFEDLGLYYIGPVDGHNLEDLA 152
+ +++ A +RA FE++G ++IGP+DGHNL+ L
Sbjct: 206 YQGVRELGKKLTSYLGKGVDRAVTRAVEHARGYVTGGTLFEEMGFFHIGPIDGHNLKHLV 265
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VLK V+ D G VLIHV+T+K K P + +
Sbjct: 266 PVLKNVRDNGD-GPVLIHVVTKKGKGYPPAEAAEDKYHGVNKFDVITGAQAKAPANAPSY 324
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D R M GTGL+LF FP R FDVGIAEQHAVTFAAG+A
Sbjct: 325 TKVFAQSLVQEARADERIVAVTAAMPSGTGLDLFGTEFPERTFDVGIAEQHAVTFAAGMA 384
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
EGL+PF AIYS+FLQR +DQV HDV LQ LPVRFAIDRAG VGADGPTHCGAFD T++A
Sbjct: 385 TEGLRPFAAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGFVGADGPTHCGAFDITYLA 444
Query: 294 CLPNMVVM 301
LPNM VM
Sbjct: 445 SLPNMAVM 452
>gi|402772875|ref|YP_006592412.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylocystis sp. SC2]
gi|401774895|emb|CCJ07761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylocystis sp. SC2]
Length = 642
Score = 266 bits (680), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 163/370 (44%), Positives = 203/370 (54%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +DAFG GHSSTSISAGL GMAV RDL +N
Sbjct: 93 IRTLRMGGGLSGFTKRAESEYDAFGAGHSSTSISAGL----------GMAVARDLADGDN 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
HV++VI + + A M+YEA+NNAG L+ L RL S
Sbjct: 143 HVVAVIGDSSMSAGMAYEALNNAGALHSRLIVILNDNDMSIAPPTGAMSAYLARLVSGGA 202
Query: 92 FRQLCQEAFSSKDKKQKF-GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R + + A +F + + + FSR G FE+LG YY+GP+DGHNL+
Sbjct: 203 YRSIREAARQLASHLPRFIYDKARKAEEFSRSFITG--GTMFEELGFYYVGPIDGHNLDH 260
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VLK V+ D G VL+HV+T+K K P +
Sbjct: 261 LLPVLKNVRD-KDDGPVLVHVVTQKGKGFGPAEESADKCHAVNKFDVATGVQIKPKANAP 319
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F K L D++ M GTGL++F K FP R FDV IAEQHAVTFAAG
Sbjct: 320 TYTNIFAKALVAEAEHDDKIVAITAAMPSGTGLDIFGKAFPHRTFDVAIAEQHAVTFAAG 379
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCA+YS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADGPTH GAFD +
Sbjct: 380 LACEGYKPFCALYSTFLQRGYDQVVHDVAIQNLPVRFAIDRAGLVGADGPTHAGAFDLAY 439
Query: 292 MACLPNMVVM 301
+ CLP V+M
Sbjct: 440 LGCLPGFVIM 449
>gi|294851814|ref|ZP_06792487.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NVSL 07-0026]
gi|294820403|gb|EFG37402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NVSL 07-0026]
Length = 643
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 167/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGLNLF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLNLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|433776340|ref|YP_007306807.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium australicum
WSM2073]
gi|433668355|gb|AGB47431.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium australicum
WSM2073]
Length = 645
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 169/368 (45%), Positives = 205/368 (55%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA RDL G N
Sbjct: 102 IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAAARDLSGGRN 151
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
+VISVI +GA A M+YEA+NNAG L+ + + L+ N A S+ + G
Sbjct: 152 NVISVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGKA 211
Query: 113 MHEIDAFSREIEA--GSRA------------------CFFEDLGLYYIGPVDGHNLEDLA 152
+ F +++ + G RA FE+LG Y+IGP+DGHNLE L
Sbjct: 212 YVGLRDFGKKLTSYLGKRADRAITRAVEHARGYVTGGTLFEELGFYHIGPIDGHNLEHLI 271
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VLK V+ G VLIHV+T+K K P +
Sbjct: 272 PVLKNVRD-NGKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAPANAPAY 330
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D+R M GGTGL+LF + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 331 TKVFAESLIQEGREDDRIVAVTAAMPGGTGLDLFGEVFPSRTFDVGIAEQHAVTFAAGLA 390
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
EG KPF AIYS+FLQR +DQV HDV +QKLPVRF IDRAG VGADG THCGAFDTTF+A
Sbjct: 391 TEGYKPFAAIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGFVGADGATHCGAFDTTFLA 450
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 451 SLPGFVVM 458
>gi|330814377|ref|YP_004358616.1| octaprenyl-diphosphate
synthase/Dimethylallyltransferase/Geranyltranstransferas
e [Candidatus Pelagibacter sp. IMCC9063]
gi|327487472|gb|AEA81877.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Candidatus
Pelagibacter sp. IMCC9063]
Length = 636
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/370 (44%), Positives = 203/370 (54%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL GKNN
Sbjct: 91 IRTLRQGGGLSGFTKRAESQYDPFGAAHSSTSISAGL----------GMAVARDLEGKNN 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSS---------- 102
+ISVI +GA A M+YEA+NNAG ++ L L+ N A SS
Sbjct: 141 SIISVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNDMSIAPPVGAMSSYLAKLLSGKK 200
Query: 103 --------KDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
K KF G++ + + + R + G FE++G +Y+G VDGH+ +
Sbjct: 201 YIGFRNFFKKISDKFPGKLKQRIGQAEEYLRGMAVG--GTLFEEMGFFYVGSVDGHSFDQ 258
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPL--------------------------KL 184
L VL+ VK G LIH IT+K K P K
Sbjct: 259 LLPVLENVKNSTHEGPFLIHAITQKGKGYQPAEDSKDKYHGVTKFNVATGEQSKSSSNKP 318
Query: 185 QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L DN+ M GTG+N+FQK FP R FDVGIAEQHAVTFAAG
Sbjct: 319 SYTNVFGETLAAHAQQDNKIVAVTGAMPSGTGINIFQKQFPKRTFDVGIAEQHAVTFAAG 378
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KP+ AIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADGPTH G+FD T+
Sbjct: 379 LATEGYKPYAAIYSTFLQRAYDQVVHDVAIQSLPVRFAIDRAGLVGADGPTHAGSFDITY 438
Query: 292 MACLPNMVVM 301
+A LPN VVM
Sbjct: 439 LATLPNFVVM 448
>gi|55733939|gb|AAV59446.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Oryza sativa
Japonica Group]
Length = 885
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/238 (58%), Positives = 163/238 (68%), Gaps = 43/238 (18%)
Query: 107 QKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIP 162
++ GG +HE +D ++R + +GS + FE+LGLYYIGPVDGHN++DL +L++VK+
Sbjct: 453 KQIGGSVHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLITILREVKSTK 512
Query: 163 DPGAVLIHVITEK-------EKAM------------------LPLK-LQQTRLFCKIL-- 194
G VLIHV+TEK E+A P K L T F + L
Sbjct: 513 TTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFAEALIA 572
Query: 195 ----DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAI 243
DNR MGGGTGLN F + FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAI
Sbjct: 573 EAEQDNRVVAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAI 632
Query: 244 YSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
YSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGADGPTHCGAFD T+MACLPNMVVM
Sbjct: 633 YSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVM 690
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 59/99 (59%), Gaps = 18/99 (18%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRI-----------NYFRYVGM 42
M T+RQT GL E+ +D+FG GHSST+ISA L + Y R GM
Sbjct: 157 MPTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAALGNLLFFLQSLCIELPAYVRLAGM 216
Query: 43 AVGRDLLGKNNHVISVIVEGATIARMSYEAINNAGVLNK 81
AVGRDL G N+V++VI +GA A +YEA+NNAG L+
Sbjct: 217 AVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 255
>gi|209402473|gb|ACI45959.1| putative plastid 1-deoxy-D-xylulose 5-phosphate synthase precursor
[Pyropia yezoensis]
Length = 660
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 207/381 (54%), Gaps = 90/381 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ+ GL E+ +D FG GHSSTSISA L GMAV RDL GKNN
Sbjct: 81 MGTMRQSGGLSGFTKRTESEYDPFGAGHSSTSISAAL----------GMAVARDLAGKNN 130
Query: 54 HVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQF-------------------- 92
I+VI +GA M+YEA+NNAG L N+ + L+ N Q
Sbjct: 131 ECIAVIGDGAITGGMAYEAMNNAGYLKNRVIVVLNDNGQVSLPTGTQTAAGVVPSGALSN 190
Query: 93 ---RQLCQEAFS-----SKDKKQKFGGQMH----EIDAFSREI-EAGSRACFFEDLGLYY 139
R L + FS +KD + F ++ ++D ++R I G FE+LG YY
Sbjct: 191 YTSRLLSSKPFSDVRSAAKDFSRLFPEEVQGIAAKVDEYARGIVSPGGGGTLFEELGFYY 250
Query: 140 IGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK---------------- 183
IGP+DGHNL+ L +L+ V+ +P V++HV TEK + P +
Sbjct: 251 IGPIDGHNLDTLIPILENVRDLPGNKPVMLHVKTEKGRGYAPAEGAFDRYHGVAKFDVAT 310
Query: 184 ----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGI 220
T +F + L D + M GGTGLNLF + FP RC+DVGI
Sbjct: 311 GKQAKSVAPTPSYTGVFARALIAEAERDRKVVAITAAMPGGTGLNLFGERFPNRCYDVGI 370
Query: 221 AEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADG 280
AEQHAVT AAG+A EG KP C IYS+FLQR +DQV HDV LQ+LPVRF +DRAGLVG DG
Sbjct: 371 AEQHAVTLAAGMATEGAKPVCCIYSTFLQRGYDQVVHDVALQRLPVRFILDRAGLVGNDG 430
Query: 281 PTHCGAFDTTFMACLPNMVVM 301
TH G+FD ++ CLPNM +M
Sbjct: 431 ATHAGSFDLAYLGCLPNMTIM 451
>gi|347526939|ref|YP_004833686.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium sp. SYK-6]
gi|345135620|dbj|BAK65229.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium sp. SYK-6]
Length = 645
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/373 (43%), Positives = 210/373 (56%), Gaps = 88/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G A+ L G++
Sbjct: 97 IRTLRQGGGLSGFTKRSESQYDPFGAAHSSTSISAAL----------GFAIANRLTGRSG 146
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L R+ S+ +
Sbjct: 147 KAIAVIGDGAMSAGMAYEAMNNAREAGNRLIVILNDNDMSIAPPVGGLSAYLARIVSSRE 206
Query: 92 FRQLCQEAFSSKDKKQKFGGQMH----EIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
F + +EA K +K +H + D F+R + G FE+LG YY+GP+DGHN
Sbjct: 207 FLSV-REAL--KKLARKLPRPLHHAARKTDEFARGMAMGG--TLFEELGFYYVGPIDGHN 261
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------------- 184
L+ L VL+ V+ + D G VL+HV+T+K K P +
Sbjct: 262 LDQLIPVLENVRDMAD-GPVLVHVVTQKGKGYAPAEAAADKYHGVQKFNVITGEQVKAPA 320
Query: 185 ---QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T +F + L D+R M GTGL+ FQK FP RCFDVGIAEQHAVTF
Sbjct: 321 GPPSYTNVFAQALMDEAQRDDRVVAITAAMPSGTGLDKFQKAFPARCFDVGIAEQHAVTF 380
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLAA+G++PFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 381 AAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFD 440
Query: 289 TTFMACLPNMVVM 301
T++A LPNMVVM
Sbjct: 441 ITYLATLPNMVVM 453
>gi|115523090|ref|YP_780001.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
BisA53]
gi|122297370|sp|Q07SR3.1|DXS_RHOP5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|115517037|gb|ABJ05021.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
BisA53]
Length = 640
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/370 (41%), Positives = 197/370 (53%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ HD FG GHSSTSISAGL GMAV DL G N
Sbjct: 94 IRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSISAGL----------GMAVASDLAGTKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + K + + + +SR G FE+LG YY+GP+DGHNL+
Sbjct: 204 YRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGG-GTLFEELGFYYVGPIDGHNLDH 262
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRLFCKI----------------- 193
L +L+ V+ D G LIHV+T+K K P + + +
Sbjct: 263 LLPILQNVRD-ADAGPFLIHVVTQKGKGYAPAEAAADKYHAVVKFDIATGTQAKTKSNAP 321
Query: 194 ----------------------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+ M GTG+++F+K FP R FDVGIAEQHAVTFAAG
Sbjct: 322 SYQNVFGASLVKEAQKDDKIVGITAAMPSGTGIDIFEKAFPKRTFDVGIAEQHAVTFAAG 381
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G+FD +
Sbjct: 382 LATEGFKPFCAIYSTFLQRGYDQIVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDNAY 441
Query: 292 MACLPNMVVM 301
+ CLPN V+M
Sbjct: 442 LGCLPNFVIM 451
>gi|118589273|ref|ZP_01546679.1| 1-deoxy-D-xylulose-5-phosphate synthase [Stappia aggregata IAM
12614]
gi|118437973|gb|EAV44608.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia aggregata IAM
12614]
Length = 639
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 166/371 (44%), Positives = 202/371 (54%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ D FG HSSTSISAGL GMA GRDL G +N
Sbjct: 94 IRTLRQGDGLSGFTKRAESPFDPFGAAHSSTSISAGL----------GMAAGRDLKGGSN 143
Query: 54 HVISVIVEGATIARMSYEAINNAG----------------------VLNKALKRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG ++ L +L S P
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGHLGSRLIVILNDNDMSIAPPVGAMSAYLAKLVSGPT 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
++ A K+ + + E A + E G + FE+LG YY+GPVDGHNLE
Sbjct: 204 YQTFRDAA---KNLVKNLPKPVFEKAARAEEYARGFWTGGTLFEELGFYYVGPVDGHNLE 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------------------- 186
L VLK V+ G +LIH +T+K K P + +
Sbjct: 261 HLLPVLKNVRDTHH-GPILIHAVTQKGKGYAPAEGAKDKYHGVAKFDVVTGKQAKPKANA 319
Query: 187 ---TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T +F L D+R M GTGL+LF + +P R FDVGIAEQHAVTFAA
Sbjct: 320 PSYTNVFATSLIKEAETDDRVLAITAAMPDGTGLDLFGEAYPKRTFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH GAFDT
Sbjct: 380 GLATEGFKPFCAIYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGLVGADGPTHAGAFDTA 439
Query: 291 FMACLPNMVVM 301
F+ CLP VVM
Sbjct: 440 FLTCLPGFVVM 450
>gi|182678782|ref|YP_001832928.1| 1-deoxy-D-xylulose-5-phosphate synthase [Beijerinckia indica subsp.
indica ATCC 9039]
gi|229813261|sp|B2IDK3.1|DXS_BEII9 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|182634665|gb|ACB95439.1| deoxyxylulose-5-phosphate synthase [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 642
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 197/353 (55%), Gaps = 74/353 (20%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+V+D FG HSSTSISAGL GMA L G NN+VI+VI +G+ A M+Y
Sbjct: 111 ESVYDPFGTAHSSTSISAGL----------GMAAATTLSGGNNNVIAVIGDGSMSAGMAY 160
Query: 71 EAINNAGV----------------------LNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNAG L+ L RL S +R + + A
Sbjct: 161 EAMNNAGAMHSRLIIILNDNEMSIAPPAGALSAYLARLVSGGTYRTVREAAKQLGRHLPH 220
Query: 109 F-GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAV 167
F + + + F+R AG FE+LG+YY+GP+DGHNL+ L VLK V+ + G +
Sbjct: 221 FIYDRARKTEEFARNFWAG--GTMFEELGIYYVGPIDGHNLDHLLPVLKNVRDFKETGPI 278
Query: 168 LIHVITEKEKAMLPLKLQQ--------------------------TRLFCKIL------D 195
L+HV+T+K K P TR+F L D
Sbjct: 279 LVHVVTQKGKGYAPAAAASDKYHSVNTFDVVTGVQTKPKANAPSYTRVFADALVKEAERD 338
Query: 196 NR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 248
++ M GGTGL++F K FP R FDVGIAEQHAVTFAAGLA EG +PFCA+YS+FL
Sbjct: 339 DKIVAITAAMPGGTGLDVFGKAFPERTFDVGIAEQHAVTFAAGLATEGYRPFCALYSTFL 398
Query: 249 QRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
QR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD +++ LPNMV+M
Sbjct: 399 QRGYDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVSYLGILPNMVIM 451
>gi|61656097|gb|AAX49359.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Zea mays]
Length = 481
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/272 (53%), Positives = 175/272 (64%), Gaps = 46/272 (16%)
Query: 73 INNAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSR 128
+ G L+ AL +L S+ R+L + A K ++ GG +HE +D ++R + +G
Sbjct: 18 VPPVGALSSALSKLQSSRPLRELREVA---KGVTKQIGGSVHELAAKVDEYARGMISGPG 74
Query: 129 ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM-- 179
+ FE+LGLYYIGPVDGHN++DL +L VK+ G VLIHV+TEK E+A
Sbjct: 75 SSLFEELGLYYIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADK 134
Query: 180 ----------------LPLK-LQQTRLFCKIL------DNR-------MGGGTGLNLFQK 209
P K L T F + L D++ MGGGTGLN F +
Sbjct: 135 YHGVAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLR 194
Query: 210 HFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFA 269
FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA
Sbjct: 195 RFPSRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFA 254
Query: 270 IDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
+DRAGLVGADGPTHCGAFD +MACLPNMVVM
Sbjct: 255 MDRAGLVGADGPTHCGAFDVAYMACLPNMVVM 286
>gi|357027710|ref|ZP_09089776.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Mesorhizobium
amorphae CCNWGS0123]
gi|355540411|gb|EHH09621.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Mesorhizobium
amorphae CCNWGS0123]
Length = 571
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 168/368 (45%), Positives = 206/368 (55%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA+ RDL G N
Sbjct: 109 IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAMARDLSGGRN 158
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
+VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ + G
Sbjct: 159 NVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 218
Query: 113 MHEIDAFSREIEA--GSRA------------------CFFEDLGLYYIGPVDGHNLEDLA 152
+ F +++ + G RA FE+LG Y+IGP+DGHNLE L
Sbjct: 219 YLGLRDFGKKLTSYLGKRADRAITRAVEHARGYVTGGTLFEELGFYHIGPIDGHNLEHLI 278
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VLK V+ D G VLIHV+T+K K P +
Sbjct: 279 PVLKNVRDNGD-GPVLIHVVTQKGKGYGPAEAAADKYHGVNKFDVITGAQAKAPANAPSY 337
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D+R M GTGL+LF + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 338 TKVFAESLVQEGREDDRIVAVTAAMPNGTGLDLFGEAFPSRTFDVGIAEQHAVTFAAGLA 397
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
EG KPF AIYS+FLQR +DQV HDV +QKLPVRF IDRAG VGADG THCGAFDTTF+A
Sbjct: 398 TEGYKPFAAIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGFVGADGATHCGAFDTTFLA 457
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 458 TLPGFVVM 465
>gi|92116388|ref|YP_576117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter hamburgensis
X14]
gi|118595592|sp|Q1QQ40.1|DXS_NITHX RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|91799282|gb|ABE61657.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter hamburgensis
X14]
Length = 668
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 204/370 (55%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISA L GMAV RDL G N
Sbjct: 120 IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISASL----------GMAVARDLSGGKN 169
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 170 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 229
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + A K + + ++ +SR S FE+LG YY+GP+DGHNL+
Sbjct: 230 YRSLREAAKQLGKHLPKMIADRAERVEEYSRGFMVNS-GTLFEELGFYYVGPIDGHNLDH 288
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------------- 188
L VLK V+ + + G +L+HV+T+K K P + +
Sbjct: 289 LLPVLKNVRDMEN-GPILLHVVTQKGKGYGPAEAAADKYHAVVKFDVSTGAQSKSKPNAP 347
Query: 189 ----LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F + L D++ M GTG+++F K FP R FDVGIAEQHAVTFAAG
Sbjct: 348 AYQNVFGQSLVKEAEKDDKIIAITAAMPSGTGVDIFNKAFPKRTFDVGIAEQHAVTFAAG 407
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G+FD +
Sbjct: 408 LATEGFKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAY 467
Query: 292 MACLPNMVVM 301
+ CLPN V+M
Sbjct: 468 LGCLPNFVIM 477
>gi|23501337|ref|NP_697464.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis 1330]
gi|161618408|ref|YP_001592295.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis ATCC 23365]
gi|261754435|ref|ZP_05998144.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 3 str.
686]
gi|376274806|ref|YP_005115245.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis HSK A52141]
gi|376280126|ref|YP_005154132.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis VBI22]
gi|384224120|ref|YP_005615284.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis 1330]
gi|30315829|sp|Q8G292.1|DXS_BRUSU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|189027768|sp|A9M8W0.1|DXS_BRUC2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|23347228|gb|AAN29379.1| deoxyxylulose-5-phosphate synthase [Brucella suis 1330]
gi|161335219|gb|ABX61524.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis ATCC 23365]
gi|261744188|gb|EEY32114.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 3 str.
686]
gi|343382300|gb|AEM17792.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis 1330]
gi|358257725|gb|AEU05460.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis VBI22]
gi|363403373|gb|AEW13668.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis HSK A52141]
Length = 643
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANVPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|261213460|ref|ZP_05927741.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 3 str.
Tulya]
gi|260915067|gb|EEX81928.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 3 str.
Tulya]
Length = 643
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|359476100|ref|XP_002282428.2| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Vitis vinifera]
gi|296081990|emb|CBI20995.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 161/378 (42%), Positives = 206/378 (54%), Gaps = 90/378 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R+ GL E+ +D FG GH +SISAGL GMAV RDL GK
Sbjct: 165 MHTLRERGGLSGFTSRSESEYDPFGAGHGCSSISAGL----------GMAVARDLKGKRE 214
Query: 54 HVISVIVEGATIARMSYEAINNAG------------------------------VLNKAL 83
+++VI G T+A YEA+ NAG L+ L
Sbjct: 215 RIVTVIGNGTTMAGQVYEAMGNAGYLDTNMVVILNDSRHSLHPKLEDGQATPINALSSTL 274
Query: 84 KRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYY 139
+L S+ FR+ + A K ++ G MHE +D ++R + A FE+LGLYY
Sbjct: 275 TKLQSSKSFRKFREAA---KGVTKRIGKGMHELAAKVDEYARGMVGPLGATLFEELGLYY 331
Query: 140 IGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAML------------ 180
IGPVDGHN+EDL VL+ V ++ G VL+HVIT++ +K+M+
Sbjct: 332 IGPVDGHNIEDLISVLQGVASLDPTGPVLVHVITKEYQGVEASQKSMISNGHLKGFYTSE 391
Query: 181 ----PLKLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQ 223
PL + F + L N MG L LFQ+ FP + FDVG+AEQ
Sbjct: 392 LSPYPLPRMYSDCFVEALVNEAEKDKDIVVVHAGMGMEPPLQLFQEKFPYKFFDVGMAEQ 451
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
HAVTF+AGLA GLKPFC I S+FLQR +DQV HDVD Q++PVRFAI AGLVG+DGPT
Sbjct: 452 HAVTFSAGLACGGLKPFCIIPSTFLQRAYDQVVHDVDRQRIPVRFAITSAGLVGSDGPTR 511
Query: 284 CGAFDTTFMACLPNMVVM 301
CGAFD TFM+CLPNM+VM
Sbjct: 512 CGAFDITFMSCLPNMIVM 529
>gi|260566959|ref|ZP_05837429.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 4 str.
40]
gi|260156477|gb|EEW91557.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 4 str.
40]
Length = 643
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANVPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|365886052|ref|ZP_09425024.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
[Bradyrhizobium sp. STM 3809]
gi|365338480|emb|CCD97555.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
[Bradyrhizobium sp. STM 3809]
Length = 641
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 161/376 (42%), Positives = 210/376 (55%), Gaps = 93/376 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 94 IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGL----------GMAVARDLSGGKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDA-FSREIEAGSRA------CFFEDLGLYYIGPVD 144
+R L +D ++ G + ++ A + +E SR FE+LG YY+GP+D
Sbjct: 204 YRTL-------RDAAKQLGQHLPKVIANRASRVEEYSRGFMMDGGTLFEELGFYYVGPID 256
Query: 145 GHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------- 188
GHNL+ L VLK V+ + + G +L+HV+T+K K P + +
Sbjct: 257 GHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYSPAEAAADKYHAVAKFDIATGTQAK 315
Query: 189 ----------LFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHA 225
+F + L D+++ G GTG+++F K FP R FDVGIAEQHA
Sbjct: 316 AKPNAPAYQNVFGQSLVKEAEKDDKIVGITAAMPSGTGIDIFAKAFPKRTFDVGIAEQHA 375
Query: 226 VTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCG 285
VTFAAGLAAEG K FCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G
Sbjct: 376 VTFAAGLAAEGYKAFCAIYSTFLQRGYDQIVHDVCIQSLPVRFAIDRAGLVGADGATHAG 435
Query: 286 AFDTTFMACLPNMVVM 301
+FD ++ CLPNMV+M
Sbjct: 436 SFDNAYLGCLPNMVIM 451
>gi|306845065|ref|ZP_07477645.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella inopinata BO1]
gi|306274480|gb|EFM56275.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella inopinata BO1]
Length = 643
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|265997614|ref|ZP_06110171.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M490/95/1]
gi|262552082|gb|EEZ08072.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M490/95/1]
Length = 646
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|260754213|ref|ZP_05866561.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 6 str.
870]
gi|260757433|ref|ZP_05869781.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 4 str.
292]
gi|260883238|ref|ZP_05894852.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 9
str. C68]
gi|297247834|ref|ZP_06931552.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 5
str. B3196]
gi|260667751|gb|EEX54691.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 4 str.
292]
gi|260674321|gb|EEX61142.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 6 str.
870]
gi|260872766|gb|EEX79835.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 9
str. C68]
gi|297175003|gb|EFH34350.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 5
str. B3196]
Length = 643
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|265994395|ref|ZP_06106952.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 3
str. Ether]
gi|262765508|gb|EEZ11297.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 3
str. Ether]
Length = 643
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|261317112|ref|ZP_05956309.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis B2/94]
gi|265988149|ref|ZP_06100706.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis
M292/94/1]
gi|340790077|ref|YP_004755541.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis
B2/94]
gi|261296335|gb|EEX99831.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis B2/94]
gi|264660346|gb|EEZ30607.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis
M292/94/1]
gi|340558535|gb|AEK53773.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis
B2/94]
Length = 643
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNEFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|225626944|ref|ZP_03784983.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ceti str. Cudo]
gi|256368891|ref|YP_003106397.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella microti CCM 4915]
gi|261218447|ref|ZP_05932728.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M13/05/1]
gi|261221652|ref|ZP_05935933.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti B1/94]
gi|261320703|ref|ZP_05959900.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M644/93/1]
gi|261751780|ref|ZP_05995489.1| 1-deoxyxylulose-5-phosphate synthase [Brucella suis bv. 5 str. 513]
gi|261757668|ref|ZP_06001377.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. F5/99]
gi|265983591|ref|ZP_06096326.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. 83/13]
gi|306839868|ref|ZP_07472666.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NF 2653]
gi|306842279|ref|ZP_07474941.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. BO2]
gi|225618601|gb|EEH15644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ceti str. Cudo]
gi|255999049|gb|ACU47448.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella microti CCM 4915]
gi|260920236|gb|EEX86889.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti B1/94]
gi|260923536|gb|EEX90104.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M13/05/1]
gi|261293393|gb|EEX96889.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M644/93/1]
gi|261737652|gb|EEY25648.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. F5/99]
gi|261741533|gb|EEY29459.1| 1-deoxyxylulose-5-phosphate synthase [Brucella suis bv. 5 str. 513]
gi|264662183|gb|EEZ32444.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. 83/13]
gi|306287587|gb|EFM59038.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. BO2]
gi|306405054|gb|EFM61335.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NF 2653]
Length = 643
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|254501985|ref|ZP_05114136.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia alexandrii
DFL-11]
gi|222438056|gb|EEE44735.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia alexandrii
DFL-11]
Length = 631
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 203/371 (54%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+++D FG HSSTSISAGL GMA RDL +N
Sbjct: 86 IRTLRQPGGLSGFTKRSESIYDPFGTAHSSTSISAGL----------GMAAARDLKDGDN 135
Query: 54 HVISVIVEGATIARMSYEAINNAG----------------------VLNKALKRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG ++ L +L S P
Sbjct: 136 NVIAVIGDGAMSAGMAYEAMNNAGHLGSRLVVILNDNDMSIAPPVGAMSAYLAKLVSGPT 195
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
++ L A K + F Q+ E A + E G + FE+LG YY+GPVDGHNLE
Sbjct: 196 YQSLRGAA---KSIVKNFPKQLAEKAARAEEYARGFWTGGTLFEELGFYYVGPVDGHNLE 252
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------------------- 186
L +LK V+ + G VLIH +T+K K P + +
Sbjct: 253 HLLPILKNVRDTHN-GPVLIHAVTQKGKGYAPAEGAKDKYHGVAKFDVVTGKQSKPKANA 311
Query: 187 ---TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T +F L D + M GTGLNLF + FP R +DVGIAEQHAVTFAA
Sbjct: 312 PSYTNVFATSLIREAEEDEKVVAITAAMPDGTGLNLFGEAFPERTYDVGIAEQHAVTFAA 371
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQV HDV LQ LPVRF IDRAGLVGADG TH GAFDT
Sbjct: 372 GMATEGYKPFAAIYSTFLQRAYDQVIHDVALQGLPVRFPIDRAGLVGADGATHAGAFDTA 431
Query: 291 FMACLPNMVVM 301
+++CLP VVM
Sbjct: 432 YLSCLPGFVVM 442
>gi|62289421|ref|YP_221214.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
str. 9-941]
gi|189023672|ref|YP_001934440.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus S19]
gi|260545827|ref|ZP_05821568.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus NCTC
8038]
gi|260761258|ref|ZP_05873601.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 2 str.
86/8/59]
gi|376273822|ref|YP_005152400.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus A13334]
gi|423167409|ref|ZP_17154112.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
str. NI435a]
gi|423170215|ref|ZP_17156890.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
str. NI474]
gi|423173705|ref|ZP_17160376.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
str. NI486]
gi|423177010|ref|ZP_17163656.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
str. NI488]
gi|423179648|ref|ZP_17166289.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
str. NI010]
gi|423182778|ref|ZP_17169415.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
str. NI016]
gi|423186279|ref|ZP_17172893.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
str. NI021]
gi|423189417|ref|ZP_17176027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
str. NI259]
gi|75497245|sp|Q57ET1.1|DXS_BRUAB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|229813263|sp|B2S9T6.1|DXS_BRUA1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|62195553|gb|AAX73853.1| Dxs, deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 1
str. 9-941]
gi|189019244|gb|ACD71966.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus S19]
gi|260097234|gb|EEW81109.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus NCTC
8038]
gi|260671690|gb|EEX58511.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 2 str.
86/8/59]
gi|363401428|gb|AEW18398.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus A13334]
gi|374540843|gb|EHR12342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
str. NI435a]
gi|374541451|gb|EHR12946.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
str. NI486]
gi|374542451|gb|EHR13940.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
str. NI474]
gi|374551167|gb|EHR22602.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
str. NI010]
gi|374551624|gb|EHR23058.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
str. NI016]
gi|374552760|gb|EHR24183.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
str. NI488]
gi|374557336|gb|EHR28733.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
str. NI259]
gi|374557958|gb|EHR29352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
str. NI021]
Length = 643
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|82699348|ref|YP_413922.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis biovar
Abortus 2308]
gi|237814909|ref|ZP_04593907.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus str. 2308
A]
gi|118595496|sp|Q2YMF0.1|DXS_BRUA2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|82615449|emb|CAJ10418.1| Transketolase, N terminal:Transketolase, central
region:Transketolase, C
terminal:Deoxyxylulose-5-phosphate synthase [Brucella
melitensis biovar Abortus 2308]
gi|237789746|gb|EEP63956.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus str. 2308
A]
Length = 643
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|261315322|ref|ZP_05954519.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis
M163/99/10]
gi|261304348|gb|EEY07845.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis
M163/99/10]
Length = 643
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNEFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|261324565|ref|ZP_05963762.1| 1-deoxyxylulose-5-phosphate synthase [Brucella neotomae 5K33]
gi|261300545|gb|EEY04042.1| 1-deoxyxylulose-5-phosphate synthase [Brucella neotomae 5K33]
Length = 643
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|148560626|ref|YP_001258456.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ovis ATCC 25840]
gi|166198603|sp|A5VP09.1|DXS_BRUO2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|148371883|gb|ABQ61862.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ovis ATCC 25840]
Length = 643
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|13476214|ref|NP_107784.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium loti
MAFF303099]
gi|21263539|sp|Q985Y3.1|DXS_RHILO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|14026974|dbj|BAB53570.1| 1-D-deoxyxylulose 5-phosphate synthase [Mesorhizobium loti
MAFF303099]
Length = 637
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 167/368 (45%), Positives = 205/368 (55%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA RDL G N
Sbjct: 94 IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAAARDLSGGRN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
+VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ + G
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGKA 203
Query: 113 MHEIDAFSREIEA--GSRA------------------CFFEDLGLYYIGPVDGHNLEDLA 152
+ F +++ + G RA FE+LG Y+IGP+DGHNLE L
Sbjct: 204 YAGLRDFGKKLTSYLGKRADRAITRAVEHARGYVTGGTLFEELGFYHIGPIDGHNLEHLI 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VLK V+ + G VLIHV+T+K K P +
Sbjct: 264 PVLKNVRDNGE-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAPANAPAY 322
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D+R M GTGL+LF + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 323 TKVFAESLIREAREDDRIVAVTAAMPSGTGLDLFGEVFPSRTFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
EG KPF AIYS+FLQR +DQV HDV +QKLPVRF IDRAG VGADG THCGAFDTTF+A
Sbjct: 383 TEGYKPFAAIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGFVGADGATHCGAFDTTFLA 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 SLPGFVVM 450
>gi|17987781|ref|NP_540415.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis bv. 1
str. 16M]
gi|225851972|ref|YP_002732205.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis ATCC
23457]
gi|256264520|ref|ZP_05467052.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 2
str. 63/9]
gi|260563510|ref|ZP_05833996.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
str. 16M]
gi|384210822|ref|YP_005599904.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M5-90]
gi|384407921|ref|YP_005596542.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M28]
gi|384444538|ref|YP_005603257.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis NI]
gi|21263517|sp|Q8YFM2.1|DXS_BRUME RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|254782063|sp|C0RHE3.1|DXS_BRUMB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|17983505|gb|AAL52679.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
str. 16M]
gi|225640337|gb|ACO00251.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis ATCC
23457]
gi|260153526|gb|EEW88618.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
str. 16M]
gi|263094853|gb|EEZ18591.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 2
str. 63/9]
gi|326408468|gb|ADZ65533.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M28]
gi|326538185|gb|ADZ86400.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M5-90]
gi|349742534|gb|AEQ08077.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis NI]
Length = 643
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|449016065|dbj|BAM79467.1| 1-deoxyxylulose-5-phosphate synthase [Cyanidioschyzon merolae
strain 10D]
Length = 772
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 213/394 (54%), Gaps = 98/394 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R++ G+ E+ +D FG GHSSTSISA L G+A+GRDL GK
Sbjct: 168 MHTLRKSGGISGFTRRVESEYDVFGAGHSSTSISAAL----------GLAIGRDLAGKKQ 217
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKA------------------------------- 82
HVI+VI +GA M+YEA+NNAG LN
Sbjct: 218 HVIAVIGDGALTGGMAYEAMNNAGYLNSRIIVILNDNGQVSLPTGTKSAAGTGPAGALSG 277
Query: 83 -LKRLHSNPQF---RQLCQEAFSS--KDKKQKFGGQMHEI-DAFSREIEAGSRACFFEDL 135
+ RL ++ +F R + +E FS D Q+ Q+ E A+ + G+RA FE+L
Sbjct: 278 YMSRLLTSKEFQDVRAIAKE-FSRLFPDPLQRTAAQLDEYARAWVAQGAGGNRATLFEEL 336
Query: 136 GLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------------------- 175
G YY+GPVDGH++E L VLK ++ P + +HV TEK
Sbjct: 337 GFYYVGPVDGHDVEVLVNVLKNIRDAPGNKPIFLHVKTEKGRGYPPAESALDKYHGVSKF 396
Query: 176 ----EKAMLPL--KLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCF 216
K M+P+ T +F K L D R M GGTG+ F + P RCF
Sbjct: 397 DLATGKQMVPMHSPPSYTSVFAKALIAEADEDRRIVGITAAMPGGTGMGAFGEAHPTRCF 456
Query: 217 DVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLV 276
DVGIAEQHAVTFAAGL+ +G KPFC IYS+FLQR +DQV HDV LQKLPVRF +DRAGLV
Sbjct: 457 DVGIAEQHAVTFAAGLSIQGFKPFCCIYSTFLQRGYDQVIHDVALQKLPVRFILDRAGLV 516
Query: 277 GADGPTHCGAFDTTFMACLPNMVVM---KDIKLV 307
G DGPTH G FD ++ C+PNM++M +I+LV
Sbjct: 517 GNDGPTHHGTFDLAYLGCIPNMMIMAPSDEIELV 550
>gi|319784710|ref|YP_004144186.1| deoxyxylulose-5-phosphate synthase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170598|gb|ADV14136.1| deoxyxylulose-5-phosphate synthase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 637
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 167/368 (45%), Positives = 205/368 (55%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA RDL G N
Sbjct: 94 IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAAARDLSGGRN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
+VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ + G
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGKA 203
Query: 113 MHEIDAFSREIEA--GSRA------------------CFFEDLGLYYIGPVDGHNLEDLA 152
+ F +++ + G RA FE+LG Y+IGP+DGHNLE L
Sbjct: 204 YIGLRDFGKKLTSYLGKRADRAITRAVEHARGYVTGGTLFEELGFYHIGPIDGHNLEHLI 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VLK V+ + G VLIHV+T+K K P +
Sbjct: 264 PVLKNVRDNGE-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAPANAPAY 322
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D+R M GTGL+LF + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 323 TKVFAESLVQEGREDDRIVAVTAAMPSGTGLDLFGEAFPSRTFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
EG KPF AIYS+FLQR +DQV HDV +QKLPVRF IDRAG VGADG THCGAFDTTF+A
Sbjct: 383 TEGYKPFAAIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGFVGADGATHCGAFDTTFLA 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>gi|163842716|ref|YP_001627120.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis ATCC 23445]
gi|189027769|sp|B0CKC0.1|DXS_BRUSI RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|163673439|gb|ABY37550.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis ATCC 23445]
Length = 643
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|338740575|ref|YP_004677537.1| 1-deoxy-d-xylulose-5-phosphate synthase [Hyphomicrobium sp. MC1]
gi|337761138|emb|CCB66971.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
thiamin-binding [Hyphomicrobium sp. MC1]
Length = 648
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 156/372 (41%), Positives = 208/372 (55%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV R++ G N
Sbjct: 98 IRTLRQPGGLSGFTKRTESEYDPFGAAHSSTSISAGL----------GMAVAREMSGGTN 147
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
+V+ VI +GA A M+YEA+NNAG L+ L R S+
Sbjct: 148 NVVCVIGDGAMSAGMAYEAMNNAGARSERLIVILNDNEMSIAPPTGALSSYLARTTSSDS 207
Query: 92 F---RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+ R L ++ +K + +G + ++ ++R + G +FE+LG YYIGP+DGH+L
Sbjct: 208 YLYVRDLAKQL--AKRLPKSWGERAARVEEYTRSLWHG--GAWFEELGFYYIGPIDGHDL 263
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
L +L+ V+ + G +L+HV+T+K K P +
Sbjct: 264 SQLVPILRNVRDA-EQGPILVHVVTKKGKGYAPAEASADKYHGVTKFNVVTGVQTKAPAS 322
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
TR+F L D++ M GTGL++F + FP R FDVGIAEQHAVTFA
Sbjct: 323 APSYTRVFADSLIDEAKKDDKIVAITAAMPDGTGLDVFGRAFPDRTFDVGIAEQHAVTFA 382
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EG+KPFCA+YS+FLQR +DQV HDV LQ LPVRFAIDRAG VGADG TH G+FD
Sbjct: 383 AGLATEGMKPFCALYSTFLQRGYDQVVHDVALQSLPVRFAIDRAGFVGADGATHAGSFDL 442
Query: 290 TFMACLPNMVVM 301
++ CLPNMV+M
Sbjct: 443 AYLGCLPNMVIM 454
>gi|265990565|ref|ZP_06103122.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
str. Rev.1]
gi|263001349|gb|EEZ13924.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
str. Rev.1]
Length = 643
Score = 263 bits (672), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 165/374 (44%), Positives = 205/374 (54%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------- 183
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 184 --------------LQQTRLFCKIL--DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
+++ R KI+ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHNDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>gi|217976903|ref|YP_002361050.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylocella silvestris
BL2]
gi|217502279|gb|ACK49688.1| deoxyxylulose-5-phosphate synthase [Methylocella silvestris BL2]
Length = 642
Score = 263 bits (672), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 197/353 (55%), Gaps = 74/353 (20%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D FG HSSTSISAGL GMAV L G+ +VI+VI +GA A M+Y
Sbjct: 110 ESEYDPFGAAHSSTSISAGL----------GMAVANTLSGRPGNVIAVIGDGAMSAGMAY 159
Query: 71 EAINNAGV----------------------LNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNAG L+ L RL S +R + + A +
Sbjct: 160 EAMNNAGAMHSRLIIILNDNDMSIAPPAGALSSYLARLVSGDAYRSVREAAKQLGRLLPR 219
Query: 109 F-GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAV 167
F + + + F+R AG FE+LG+YY+GP+DGHNL+ + VLK V+ + G +
Sbjct: 220 FVYDRARKTEEFARNFWAG--GTLFEELGIYYVGPIDGHNLDQMLPVLKNVRDFKETGPI 277
Query: 168 LIHVITEKEKAMLPLKLQQ--------------------------TRLFCKIL------D 195
L+HV+T+K K P + T +F + L D
Sbjct: 278 LVHVVTQKGKGYAPAEATHDKYHAVNMFDVVTGKQVKPKPNAPVYTSVFAESLVKEAAKD 337
Query: 196 NR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 248
++ M GTGL++FQK FP R FDVGIAEQHAVTFAAGLA EG KPFC IYS+FL
Sbjct: 338 DKIVAITAAMPSGTGLDIFQKTFPERTFDVGIAEQHAVTFAAGLATEGFKPFCTIYSTFL 397
Query: 249 QRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
QR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD +F+ LPNMVVM
Sbjct: 398 QRGYDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDISFLGILPNMVVM 450
>gi|86751558|ref|YP_488054.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
HaA2]
gi|118595612|sp|Q2IRL7.1|DXS_RHOP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|86574586|gb|ABD09143.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
HaA2]
Length = 638
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 202/370 (54%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 91 IRTLRTAGGLSGFTKRTESDYDPFGAAHSSTSISAGL----------GMAVARDLAGGTN 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG +N L RL+S
Sbjct: 141 NVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAPPVGAMSAYLSRLYSGKT 200
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + K + + + +SR G FE+LG YY+GP+DGHNL+
Sbjct: 201 YRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGG-GTLFEELGFYYVGPIDGHNLDH 259
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------------- 188
L +L+ V+ + G LIHV+T+K K P + +
Sbjct: 260 LLPILQNVRD-AETGPFLIHVVTQKGKGYAPAEAASDKYHAVVKFDIATGTQAKAKSNAP 318
Query: 189 ----LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F + L D++ M GTG+++F+K FP R FDVGIAEQHAVTFAAG
Sbjct: 319 SYQNVFGQSLVKEAAKDDKVVGITAAMPSGTGIDIFEKAFPDRTFDVGIAEQHAVTFAAG 378
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G+FD +
Sbjct: 379 LATEGFKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAY 438
Query: 292 MACLPNMVVM 301
+ CLPN V+M
Sbjct: 439 LGCLPNFVIM 448
>gi|209885785|ref|YP_002289642.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
carboxidovorans OM5]
gi|337740631|ref|YP_004632359.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
carboxidovorans OM5]
gi|386029648|ref|YP_005950423.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
carboxidovorans OM4]
gi|209873981|gb|ACI93777.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
carboxidovorans OM5]
gi|336094716|gb|AEI02542.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
carboxidovorans OM4]
gi|336098295|gb|AEI06118.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
carboxidovorans OM5]
Length = 638
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/372 (43%), Positives = 207/372 (55%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL G+N
Sbjct: 92 IRTLRQGGGLSGFTKRAESEYDCFGTAHSSTSISAGL----------GMAVARDLAGENR 141
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
V++VI +GA A M+YEA+NNAG ++ L RL S+
Sbjct: 142 SVVAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNEMSIAPPVGAMSSYLTRLTSSNA 201
Query: 92 FRQLCQEAFSSKDKKQKF---GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+R L + + KF G Q E ++R + +G FE+LG YY+GP+DGHNL
Sbjct: 202 YRSLREIGKQVARRLPKFMEKGAQRAE--EYARGMISG--GTLFEELGFYYVGPIDGHNL 257
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
+ L VLK V+ G L+HV+T+K K + +
Sbjct: 258 DQLLPVLKNVRD-SKVGPTLVHVVTQKGKGYSHAETAKDKYHGVVKFDVATGKQNKAKAN 316
Query: 187 ----TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F L D+++ G GTG++LFQK P R FDVGIAEQHAVTFA
Sbjct: 317 APSYTSVFGSTLARLAETDDKIVGITAAMPSGTGIDLFQKVHPERTFDVGIAEQHAVTFA 376
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EG+KPF A+YS+FLQR +DQV HDV +Q+LPVRF IDRAGLVGADGPTH G+FD
Sbjct: 377 AGLATEGMKPFVALYSTFLQRAYDQVVHDVAIQRLPVRFVIDRAGLVGADGPTHAGSFDI 436
Query: 290 TFMACLPNMVVM 301
++ CLP+MV+M
Sbjct: 437 AYLGCLPDMVIM 448
>gi|319898602|ref|YP_004158695.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella clarridgeiae
73]
gi|319402566|emb|CBI76111.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella clarridgeiae
73]
Length = 640
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 204/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+V+D FG GHSSTSISAGL GMA+ L +
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMAMVSALKAEER 142
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++ISVI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNIISVIGDGAISAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQE-AFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L Q SK + F + + F+R G F++LG YY+GP+DGHN
Sbjct: 203 SYRNLRQRIKILSKKLPKFFLEKARYSEEFARSFFVG--GTLFDELGFYYVGPIDGHNFG 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ PD G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVRECPD-GPVLVHVVTHKGKGYAPAEASSDKYHGVNRFDVITGKQVKAQSNS 319
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L DN++ G GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 320 LSYTKVFSKALIEEATHDNKIVGITAAMPNGTGLDFFAEKFPKRMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A+EG KPF AIYS+FLQR +DQ+ HDV LQKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GIASEGYKPFVAIYSTFLQRAYDQIIHDVSLQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+A LP+ V+M
Sbjct: 440 FLATLPDFVIM 450
>gi|395765602|ref|ZP_10446196.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella sp. DB5-6]
gi|395411156|gb|EJF77690.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella sp. DB5-6]
Length = 640
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 203/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+V+D FG GHSSTSISAGL GMA+ L +
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMAMASALKAETK 142
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++ISVI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNIISVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQEA-FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + SK + FG + + F+R G F++LG YY+GP+DGHNLE
Sbjct: 203 AYRSLRERVKVLSKKLPKFFGEKARRSEEFARGFLVG--GTLFDELGFYYVGPIDGHNLE 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVREYPY-GPVLVHVVTHKGKGYAPAEASSDKYHGVNSFDIVTGKQVKIQSKS 319
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L D+++ G GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 320 LSYTKVFSKALIEEASYDDKVVGITAAMPTGTGLDAFAEKFPERMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+ LP VVM
Sbjct: 440 FLTTLPEFVVM 450
>gi|338973399|ref|ZP_08628763.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bradyrhizobiaceae
bacterium SG-6C]
gi|414170518|ref|ZP_11426072.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia clevelandensis ATCC
49720]
gi|338233442|gb|EGP08568.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bradyrhizobiaceae
bacterium SG-6C]
gi|410884296|gb|EKS32124.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia clevelandensis ATCC
49720]
Length = 640
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 206/370 (55%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL GK N
Sbjct: 94 IRTLRTGGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVARDLTGKKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
+VI+VI +G+ A M+YEA+NNAG ++ L + ++ R L +
Sbjct: 144 NVIAVIGDGSMSAGMAYEAMNNAGAMHSRLIVILNDNDMSIAPPVGAMSAYLARLLSSQT 203
Query: 100 FSSKDKKQK---------FGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+ S + K F + + ++R + G FE+LG +Y+GP+DGHNL+
Sbjct: 204 YGSAREALKNLAHKLPKFFEDRALRAEEYARGMVTG--GTLFEELGFFYVGPIDGHNLDH 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VL V+ + G VLIHV+T+K K P +
Sbjct: 262 LLPVLTNVRDAGN-GPVLIHVVTQKGKGYAPAEASADKYHAVAKFDVATGAQAKAKSNAP 320
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D++ M GGTG++LF+K FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTAVFGQSLIKEAQKDDKIVAITAAMPGGTGVDLFEKVFPERTFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVG DGPTH G+FD +
Sbjct: 381 LATEGFKPFCAIYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGQDGPTHAGSFDNAY 440
Query: 292 MACLPNMVVM 301
+ CLP V+M
Sbjct: 441 LGCLPGFVIM 450
>gi|414172488|ref|ZP_11427399.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia broomeae ATCC
49717]
gi|410894163|gb|EKS41953.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia broomeae ATCC
49717]
Length = 638
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 160/372 (43%), Positives = 205/372 (55%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL G+
Sbjct: 92 IRTLRQGGGLSGFTKRAESEYDCFGAAHSSTSISAGL----------GMAVARDLAGEER 141
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
++++VI +GA A M+YEA+NNAG ++ L RL S+
Sbjct: 142 NIVAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNEMSIAPPVGAMSAYLSRLTSSNT 201
Query: 92 FRQLCQEAFSSKDKKQKF---GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+R L + + KF G Q E ++R +G FE+LG +Y+GP+DGHNL
Sbjct: 202 YRSLREIGKQVAKRLPKFIEKGAQRAE--EYARGFLSG--GTLFEELGFFYVGPIDGHNL 257
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
+ L VLK V+ G LIHV+TEK K P +
Sbjct: 258 DHLLPVLKNVRD-SKVGPTLIHVVTEKGKGYTPAETSADKYHGVVKFDVATGKQAKAQAN 316
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T++F + L D++ M GTG+++F K FP R FDVGIAEQH VTFA
Sbjct: 317 APAYTKVFGQSLVQEAEKDDKIVAITAAMPSGTGVDIFGKAFPERTFDVGIAEQHGVTFA 376
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA+EGLKPF AIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+FD
Sbjct: 377 AGLASEGLKPFVAIYSTFLQRAYDQVVHDVAIQGLPVRFIIDRAGLVGADGPTHAGSFDL 436
Query: 290 TFMACLPNMVVM 301
++ CLP MV+M
Sbjct: 437 AYLGCLPGMVLM 448
>gi|90420127|ref|ZP_01228035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335461|gb|EAS49211.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aurantimonas manganoxydans
SI85-9A1]
Length = 638
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 167/374 (44%), Positives = 203/374 (54%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRT+RQ GL E+ +D FG GHSSTSISAGL GMAV RDL G N
Sbjct: 94 MRTVRQEGGLSGFAKRTESEYDPFGAGHSSTSISAGL----------GMAVARDLSGGKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG L+ L RL S
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGKT 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R L +A K Q G E +R E +R F FE+LG YY+GP+DGH
Sbjct: 204 YRSLRDQA---KSISQHLPGFFRE---GARRTEEYTRGFFTGGTMFEELGFYYVGPIDGH 257
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------- 183
+L+ L VLK V+ G +L+HV+T+K K P +
Sbjct: 258 DLDHLLPVLKNVRDA-KTGPILVHVVTKKGKGYGPAENSADKYHGVSKFDVITGAQAKSK 316
Query: 184 ---LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T +F L D+R M GTGL+ F + FP R FDVGIAEQHAVT
Sbjct: 317 GNAPSYTGVFADSLIQEAQDDDRIVAVNAAMPNGTGLDKFAEIFPKRTFDVGIAEQHAVT 376
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
F AGLA++G KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADGPTH G+F
Sbjct: 377 FCAGLASDGYKPFAAIYSTFLQRAYDQIVHDVAIQKLPVRFAIDRAGYVGADGPTHAGSF 436
Query: 288 DTTFMACLPNMVVM 301
DT F+ LP MVVM
Sbjct: 437 DTGFLCPLPGMVVM 450
>gi|16226685|gb|AAL16232.1|AF428463_1 AT4g15560/dl3821w [Arabidopsis thaliana]
Length = 428
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/238 (56%), Positives = 160/238 (67%), Gaps = 43/238 (18%)
Query: 107 QKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIP 162
++ GG MH+ +D ++R + +G+ + FE+LGLYYIGPVDGHN++DL +LK+VK+
Sbjct: 3 KQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTR 62
Query: 163 DPGAVLIHVITEKEKAML----------------PLKLQQ----------TRLFCKIL-- 194
G VLIHV+TEK + P +Q T F + L
Sbjct: 63 TTGPVLIHVVTEKGRGYPYAERADDKYHGVVKFDPATGRQFKTTNKTQSYTTYFAEALVA 122
Query: 195 -----------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAI 243
MGGGTGLNLFQ+ FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAI
Sbjct: 123 EAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAI 182
Query: 244 YSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
YSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGADGPTHCGAFD TFMACLPNM+VM
Sbjct: 183 YSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVM 240
>gi|395790245|ref|ZP_10469739.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella taylorii 8TBB]
gi|395426896|gb|EJF93014.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella taylorii 8TBB]
Length = 640
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 204/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL-LGKN 52
+RT+RQ GL E+V+D FG GHSSTSISAGL GM+V L +
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMSVASALKVETR 142
Query: 53 NHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++ISVI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNIISVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQEA-FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + SK + FG + + F+R G F++LG YY+GP+DGHNLE
Sbjct: 203 AYRSLRERVKVLSKKLPKFFGEKARRSEEFARGFLVG--GTLFDELGFYYVGPIDGHNLE 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVREYPY-GPVLVHVVTHKGKGYAPAEASSDKYHGVNSFDVVTGKQINTQSNS 319
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L D+++ G GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 320 LSYTKVFSKALIEEASHDDKIIGITAAMPTGTGLDAFAEKFPERMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F++ LP VVM
Sbjct: 440 FLSTLPEFVVM 450
>gi|61656095|gb|AAX49358.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Zea mays]
Length = 424
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/226 (58%), Positives = 156/226 (69%), Gaps = 39/226 (17%)
Query: 115 EIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITE 174
++D ++R + + S + FE+LGLYYIGPVDGH +EDL + ++VK++P PG VLIH++TE
Sbjct: 8 KVDEYARGMISASGSSLFEELGLYYIGPVDGHCVEDLVTIFEKVKSMPAPGPVLIHIVTE 67
Query: 175 KEKAMLPLK--------------------------LQQTRLFCKIL------DNR----- 197
K K P + L T+ F + L D +
Sbjct: 68 KGKGYPPAEAAADRMHGVVKFEPATGRQLKSKSPTLSYTQYFAESLIREAESDEKVVAIH 127
Query: 198 --MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQV 255
MGGGTGLN FQK FP RCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR +DQV
Sbjct: 128 AAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQV 187
Query: 256 AHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
HDVDLQ+LPVRFA+DRAGLVGADGPTHCGAFD +MACLPNMVVM
Sbjct: 188 VHDVDLQRLPVRFALDRAGLVGADGPTHCGAFDVAYMACLPNMVVM 233
>gi|319403927|emb|CBI77515.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella rochalimae ATCC
BAA-1498]
Length = 640
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 204/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+V+D FG GHSSTSISAGL GMA+ L +
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMAMVSALEAEEK 142
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++ISVI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNIISVIGDGAISAGMAYEAMNNAGALDARLIVILNDNDMSIASPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQEA-FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + SK + F + + F+R AG F++LG YY+GP+DGHN
Sbjct: 203 SYRSLRERVRILSKKLPKFFSEKARYSEEFARSFFAG--GTLFDELGFYYVGPIDGHNFG 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ PD G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVRECPD-GPVLVHVVTHKGKGYPPAEASSDKYHGVNCFDVITGKQVKAQSSS 319
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F + L DN++ G GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 320 LSYTKVFSQALIEEATHDNKIVGITAAMPNGTGLDSFSEKFPKRMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV LQKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GIACEGYKPFVAIYSTFLQRAYDQIVHDVSLQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+A LP+ VVM
Sbjct: 440 FLATLPDFVVM 450
>gi|154248651|ref|YP_001419609.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthobacter autotrophicus
Py2]
gi|229836094|sp|A7IPK6.1|DXS_XANP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|154162736|gb|ABS69952.1| deoxyxylulose-5-phosphate synthase [Xanthobacter autotrophicus Py2]
Length = 643
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 162/370 (43%), Positives = 200/370 (54%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL G+
Sbjct: 93 IRTLRQGGGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVARDLSGEER 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+V+ VI +GA A M+YEA+NNAG ++ L RL S
Sbjct: 143 NVVCVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNDMSIAPPTGAMSAYLARLISGQT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQ-MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + KF + + F+R G FE+LG YY+GP+DGHNL+
Sbjct: 203 YRSLREIGKQIAGHLPKFVERGAARAEEFARGFWTGG--TLFEELGFYYVGPIDGHNLDH 260
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VLK V+ G +L+HV+T+K K P +
Sbjct: 261 LLPVLKNVRDA-KTGPILVHVVTQKGKGYAPAEASADKYHGVVKFDVVTGAQVKAKSNAP 319
Query: 187 --TRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
TR+F + L ++ M GTGL+LF + +P R FDVGIAEQHAVTFAAG
Sbjct: 320 SYTRVFAESLISQARHDPKVVAITAAMPSGTGLDLFGQVYPERTFDVGIAEQHAVTFAAG 379
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAAEG KPFCA+YS+FLQR +DQV HDV LQ LPVRF IDRAGLVGADG TH GAFD F
Sbjct: 380 LAAEGFKPFCALYSTFLQRAYDQVVHDVALQGLPVRFIIDRAGLVGADGATHAGAFDIAF 439
Query: 292 MACLPNMVVM 301
+ACLP M VM
Sbjct: 440 LACLPGMTVM 449
>gi|288961626|ref|YP_003451936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azospirillum sp. B510]
gi|288913906|dbj|BAI75392.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azospirillum sp. B510]
Length = 637
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/370 (42%), Positives = 201/370 (54%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ HD FG GHSSTSISAGL GMAV + G+
Sbjct: 93 IRTLRMGGGLSGFTKRSESDHDPFGAGHSSTSISAGL----------GMAVASKMKGERR 142
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
+VI+VI +GA A M+YEA+NNA G ++ L RL S+
Sbjct: 143 NVIAVIGDGAMSAGMAYEAMNNAASTKSRLIVILNDNDMSIAPPVGAMSAYLSRLISSKP 202
Query: 92 FRQLCQEAFSSKDK-KQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+ L A D+ + + ++R + G FE+LG YYIGP+DGHNL+
Sbjct: 203 YLSLRHLAKEIADQLPRPLRNAARRAEEYARGMVTG--GTLFEELGFYYIGPIDGHNLDH 260
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VL+ V+ D VLIHV+T+K K P +
Sbjct: 261 LLPVLQNVRDADDDKPVLIHVVTKKGKGYGPAEESADKLHAVAKFDVVTGTQSKPKSNAP 320
Query: 187 --TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
TR+F + L M GTGL+LF + FP RCFDVGIAEQHAVTFAAG
Sbjct: 321 TYTRVFAQSLIAEAAADPSIVGITAAMPSGTGLDLFGERFPDRCFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+A EG KPFCAIYS+FLQR +DQV HDV LQ LPVRFA+DRAGLVGADG TH G+FDT +
Sbjct: 381 MATEGFKPFCAIYSTFLQRAYDQVIHDVVLQHLPVRFALDRAGLVGADGATHAGSFDTAY 440
Query: 292 MACLPNMVVM 301
+ CLP++V+M
Sbjct: 441 LGCLPDIVLM 450
>gi|452821339|gb|EME28371.1| 1-deoxy-D-xylulose-5-phosphate synthase [Galdieria sulphuraria]
Length = 804
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 167/387 (43%), Positives = 210/387 (54%), Gaps = 99/387 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R+ GL E+ +D FG GHSSTSISA L GMA RDL GK N
Sbjct: 187 MLTLRKYGGLSGFTKRAESEYDPFGAGHSSTSISAAL----------GMATARDLSGKRN 236
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQF-------------------- 92
H I+VI +G M+YEA+NN G LN + + L+ N Q
Sbjct: 237 HCIAVIGDGGITGGMAYEAMNNCGYLNHRVIVILNDNNQVSLPTGTKTAGGVSPAGALSK 296
Query: 93 ---RQLCQEAFS-----SKDKKQKFGGQMHEIDAFSREIEAGSRACF------FEDLGLY 138
R L F +KD + F H++ F+ + + +R F FE+LG Y
Sbjct: 297 YTNRLLSSSPFLNIRSLAKDLSRIF---PHQVQGFAAKADEYARTLFTGGGTLFEELGFY 353
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------ 179
Y+GPVDGH+LEDL +L+ V+ + VLIHV TEK EKA+
Sbjct: 354 YVGPVDGHSLEDLIPILENVRDMHVNKPVLIHVKTEKGRGYPPAEKALDKYHGVTSFDVE 413
Query: 180 --LPLKLQQTR----------LFCKIL-----DNR--------MGGGTGLNLFQKHFPIR 214
PLK Q + +F L ++R M GGTGLNLF + FP R
Sbjct: 414 TGKPLKKQDVKSSSAPLNYSTIFANTLIREAEEDRKIVAITAAMPGGTGLNLFGEKFPSR 473
Query: 215 CFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAG 274
CFDVGIAEQHAVTFAAGLA+EG KPFC IYS+FLQR +DQV HDV LQ LPVRF IDRAG
Sbjct: 474 CFDVGIAEQHAVTFAAGLASEGYKPFCCIYSTFLQRGYDQVIHDVALQSLPVRFMIDRAG 533
Query: 275 LVGADGPTHCGAFDTTFMACLPNMVVM 301
+VG DG TH G++D T++ C+PN+V+M
Sbjct: 534 MVGDDGSTHQGSYDLTYLGCIPNIVIM 560
>gi|49475232|ref|YP_033273.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella henselae str.
Houston-1]
gi|81648131|sp|Q6G4D1.1|DXS_BARHE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|49238037|emb|CAF27244.1| 1-deoxyxylulose-5-phosphate synthase [Bartonella henselae str.
Houston-1]
Length = 640
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 201/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG-KN 52
+RT+RQ GL E+V+D FG GHSSTSISAGL GMAV L K
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMAVASALKAEKR 142
Query: 53 NHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++++VI +GA A M+YEA+NNAG LN L RL S P
Sbjct: 143 RNIVAVIGDGAMSAGMAYEAMNNAGALNARLIVVLNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQEAFSSKDKKQKFG-GQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + +K KF + + F+R G FE+LG YY+GP+DGHNL+
Sbjct: 203 AYRSLRERVKVLGEKLPKFFLDKARRSEEFARGFLVG--GTLFEELGFYYVGPIDGHNLK 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P G VLIHV+T K K P +
Sbjct: 261 HLLPVLKNVREYPT-GPVLIHVVTHKGKGYAPAEASLDKYHGVNRFDIITGKQVKASSNV 319
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L D++ M GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 320 LPYTKVFSKALREEASYDDKIVAITAAMPTGTGLDFFAEKFPERMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GMACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+ LP VVM
Sbjct: 440 FLTTLPEFVVM 450
>gi|426401571|ref|YP_007020543.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Endolissoclinum
patella L2]
gi|425858239|gb|AFX99275.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Endolissoclinum
patella L2]
Length = 637
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 161/370 (43%), Positives = 209/370 (56%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D+FG GHSSTSIS+GL GM RDLLGK+
Sbjct: 94 IRTLRQGGGLSGFTKRSESKYDSFGAGHSSTSISSGL----------GMIAARDLLGKDF 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
V+SVI +GA A M+YEAINNAG ++ + ++ + R + +
Sbjct: 144 DVVSVIGDGAMSAGMAYEAINNAGASASSILVILNDNKMSISQPVGAMSAYLSRIVSSRS 203
Query: 100 FSS-----KDKKQKFGGQM----HEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
FSS K Q F + + F+R+I G+ FE +G +YIGPVDGHN++
Sbjct: 204 FSSLHELKKQLTQHFPRSLDLVTRQAKKFARDILRGN--TLFEKMGFFYIGPVDGHNIDH 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKA----------------MLPLKLQQ-------- 186
L +LK++K G VL+H++TEK + P+ +Q
Sbjct: 262 LVLILKKLKG-SKHGPVLLHIVTEKGRGHPFAKNNAEKYHAVAKFNPITGKQVKPKLNAP 320
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D+R M GTGLN F + FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTNVFAESLIQAAEVDDRIVAITAAMPSGTGLNKFAERFPKRSFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+A EG+KPF AIYS+FLQR +DQV HDV L LPVRFAIDRAGLVGADGP H GAFD T+
Sbjct: 381 MACEGMKPFAAIYSTFLQRGYDQVVHDVMLHDLPVRFAIDRAGLVGADGPPHAGAFDLTY 440
Query: 292 MACLPNMVVM 301
+ CLPN ++M
Sbjct: 441 LGCLPNFIIM 450
>gi|49473998|ref|YP_032040.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella quintana str.
Toulouse]
gi|81647185|sp|Q6G0D4.1|DXS_BARQU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|49239501|emb|CAF25854.1| 1-deoxyxylulose-5-phosphate synthase [Bartonella quintana str.
Toulouse]
Length = 640
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 203/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG-KN 52
+RT+RQ GL E+V+D FG GHSSTSISAGL GM V L K
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMTVASALKAEKR 142
Query: 53 NHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++I+VI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQE-AFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + SK + F + + F+R G F++LG YY+GP+DGHNL+
Sbjct: 203 AYRSLRERIKMFSKKMPKFFLDKARRSEEFARGFLVG--GTLFDELGFYYVGPIDGHNLK 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P+ G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVREYPN-GPVLVHVVTHKGKGYAPAEASSDKYHGVNSFDVVTGKQIKTQSNA 319
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L DN++ G GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 320 LAYTKVFSKALIEEATHDNKIVGITAAMPTGTGLDAFAEKFPERMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQV HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GMACEGYKPFVAIYSTFLQRAYDQVIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+A LP VVM
Sbjct: 440 FLATLPEFVVM 450
>gi|83312003|ref|YP_422267.1| 1-deoxy-D-xylulose-5-phosphate synthase [Magnetospirillum
magneticum AMB-1]
gi|118595587|sp|Q2W367.1|DXS_MAGMM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|82946844|dbj|BAE51708.1| Deoxyxylulose-5-phosphate synthase [Magnetospirillum magneticum
AMB-1]
Length = 644
Score = 260 bits (665), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 198/356 (55%), Gaps = 79/356 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D FG GHSSTSISA L GMAV RDL G N+VI+VI +GA A +Y
Sbjct: 116 ESEYDPFGAGHSSTSISAAL----------GMAVARDLKGATNNVIAVIGDGAMSAGQAY 165
Query: 71 EAINNAGV----------------------LNKALKRLHSNPQF---RQLCQE-AFSSKD 104
EA+NNAG L+ L RL S+P + R L ++ A
Sbjct: 166 EAMNNAGAAGSRLIVILNDNDMSIAPPVGALSAHLSRLLSSPSYHSLRHLVKDLAHLLPP 225
Query: 105 KKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDP 164
++ G+ E ++R + +G FE+LG YY+GP+DGHN E L VLK ++ D
Sbjct: 226 SLERAVGRAEE---YARGMVSGG-GTLFEELGFYYVGPIDGHNFEHLLPVLKNLRDSDDT 281
Query: 165 GAVLIHVITEKEKAMLPLKL--------------------------QQTRLFCKIL---- 194
V++HV+T+K + P + T +F K L
Sbjct: 282 KPVMLHVVTKKGRGYPPAEAAADKYHGVGRFDVLTGQLEKPKANAPSYTSVFAKALIAEA 341
Query: 195 --DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS 245
D+R M GGTGL+ F FP R FDVGIAEQHAVTFA GLA EG KPFCAIYS
Sbjct: 342 EVDDRVVAITAAMPGGTGLDKFGDRFPARTFDVGIAEQHAVTFAGGLATEGFKPFCAIYS 401
Query: 246 SFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
SFLQR +DQV HDV LQKLPVRFAIDRAGLVGADG TH G++D F+ CLP++V+M
Sbjct: 402 SFLQRAYDQVQHDVVLQKLPVRFAIDRAGLVGADGATHAGSYDMAFLGCLPDIVIM 457
>gi|110633092|ref|YP_673300.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chelativorans sp. BNC1]
gi|118595588|sp|Q11KE0.1|DXS_MESSB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|110284076|gb|ABG62135.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chelativorans sp. BNC1]
Length = 650
Score = 260 bits (665), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 163/375 (43%), Positives = 204/375 (54%), Gaps = 92/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV R+L G
Sbjct: 107 IRTLRQEDGLSGFTKRSESEYDPFGAAHSSTSISAGL----------GMAVARELSGGQR 156
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
HVI+VI +GA A M+YEA+NNAG L+ L RL S
Sbjct: 157 HVIAVIGDGALSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSTYLARLASGRA 216
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEI--DAFSREIEAG----SRACFFEDLGLYYIGPVDG 145
+R + +D +K + + A +R +E + FE++G ++IGP+DG
Sbjct: 217 YRGI-------RDVGKKLTSHLGKSFDRAITRAVEHARGFVTGGTLFEEMGFFHIGPIDG 269
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------- 184
H+LE L VL+ V+ G VLIHV+T+K K P +
Sbjct: 270 HDLEALVPVLRNVRD-NGTGPVLIHVVTQKGKGYPPAEAAADKYHGVAKFDVITGAQAKS 328
Query: 185 -----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAV 226
T++F + L D R M GTGL+LF+K FP R FDVGIAEQHAV
Sbjct: 329 PAGAPSYTKVFAQALVQEAREDKRIVAITAAMPSGTGLDLFEKEFPDRSFDVGIAEQHAV 388
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFAAGLA EG +PF AIYS+FLQR +DQV HDV +Q LPVRFAIDRAG VGADG THCGA
Sbjct: 389 TFAAGLATEGYRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGFVGADGATHCGA 448
Query: 287 FDTTFMACLPNMVVM 301
FD ++A LPNMVVM
Sbjct: 449 FDVAYLATLPNMVVM 463
>gi|395785879|ref|ZP_10465607.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tamiae Th239]
gi|423717226|ref|ZP_17691416.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tamiae Th307]
gi|395424337|gb|EJF90524.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tamiae Th239]
gi|395427441|gb|EJF93532.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tamiae Th307]
Length = 640
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 164/373 (43%), Positives = 206/373 (55%), Gaps = 87/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+++D FG GHSSTSISAGL GMAV L +NN
Sbjct: 93 IRTLRQAGGLSGFTKRSESIYDPFGAGHSSTSISAGL----------GMAVASAL--ENN 140
Query: 54 ---HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHS 88
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 141 TQRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVS 200
Query: 89 NPQFRQLCQEAFSSKDKKQKF-GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
+P +R L + A + K KF + + ++R G FE+LG YYIGPVDGHN
Sbjct: 201 SPAYRTLRERAKALTKKLPKFFWDKAKRSEEYARGFLTG--GTLFEELGFYYIGPVDGHN 258
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------------- 186
L+ L VLK V+ P+ G VL+HV+T K K P +
Sbjct: 259 LDHLLPVLKNVREHPN-GPVLVHVVTHKGKGYAPAEAASDKYHGVNRFDIVTGKQVKANS 317
Query: 187 -----TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T++F K L D ++ G GTGL+ F + FP R FDVGIAEQHAVTF
Sbjct: 318 NAPSYTKIFAKALIEEARHDEKIVGITAAMPTGTGLDAFGEVFPARMFDVGIAEQHAVTF 377
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAG+A+EG KPF AIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAG VGADG TH G+FD
Sbjct: 378 AAGMASEGYKPFVAIYSTFLQRGYDQIVHDVSIQNLPVRFAIDRAGFVGADGATHAGSFD 437
Query: 289 TTFMACLPNMVVM 301
T F+ LP VVM
Sbjct: 438 TGFLTALPGFVVM 450
>gi|403530265|ref|YP_006664794.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella quintana RM-11]
gi|403232337|gb|AFR26080.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella quintana RM-11]
Length = 636
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 203/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG-KN 52
+RT+RQ GL E+V+D FG GHSSTSISAGL GM V L K
Sbjct: 89 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMTVASALKAEKR 138
Query: 53 NHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++I+VI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 139 RNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAHLARLVSRP 198
Query: 91 QFRQLCQE-AFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + SK + F + + F+R G F++LG YY+GP+DGHNL+
Sbjct: 199 AYRSLRERIKMFSKKMPKFFLDKARRSEEFARGFLVG--GTLFDELGFYYVGPIDGHNLK 256
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P+ G VL+HV+T K K P +
Sbjct: 257 HLLPVLKNVREYPN-GPVLVHVVTHKGKGYAPAEASSDKYHGVNSFDVVTGKQIKTQGNA 315
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L DN++ G GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 316 LAYTKVFSKALIEEATHDNKIVGITAAMPTGTGLDAFAEKFPERMFDVGIAEQHAVTFAA 375
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 376 GMACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 435
Query: 291 FMACLPNMVVM 301
F+A LP VVM
Sbjct: 436 FLATLPEFVVM 446
>gi|163867874|ref|YP_001609078.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tribocorum CIP
105476]
gi|189027767|sp|A9IQP2.1|DXS_BART1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|161017525|emb|CAK01083.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tribocorum CIP
105476]
Length = 635
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 165/371 (44%), Positives = 202/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG-KN 52
+RT+RQ GL E+V+D FG GHSSTSISAGL GMAV L K
Sbjct: 93 IRTLRQEGGLSGFTKRVESVYDPFGAGHSSTSISAGL----------GMAVASALKEEKK 142
Query: 53 NHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
VI+VI +GA A M+YEA+NNAG LN L RL S P
Sbjct: 143 RKVIAVIGDGAMSAGMAYEAMNNAGALNARLIVILNDNDMSIAPPTGSMSAHLARLVSRP 202
Query: 91 QFRQLCQEAFSSKDKKQKF-GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + +K KF + + F+R + G F++LG YY+GP+DGHNL
Sbjct: 203 SYRHLRERVKMLSEKLPKFFWDKARRSEEFARGLLVG--GTLFDELGFYYVGPIDGHNLG 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVREYPH-GPVLVHVVTHKGKGYPPAEASSDKYHGVNRFDVTTGKQVKASSNI 319
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L D+++ G GTGL+ F + FP + FDVGIAEQHAVTFAA
Sbjct: 320 LPYTKVFSKALVEEACHDDKIVGITAAMPTGTGLDSFAEKFPEKMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GLACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+A LP VVM
Sbjct: 440 FLATLPEFVVM 450
>gi|402850980|ref|ZP_10899163.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodovulum sp. PH10]
gi|402498749|gb|EJW10478.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodovulum sp. PH10]
Length = 641
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 160/373 (42%), Positives = 206/373 (55%), Gaps = 86/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA+ RDL K N
Sbjct: 94 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAGL----------GMAIARDLDEKAN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
+V+ VI +GA A M+YEA+NNAG L+ L RL +
Sbjct: 144 NVVCVIGDGAMSAGMAYEALNNAGAMDSNLIVVLNDNDMSIAPPVGALSAYLARLMTGRP 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
+ L + K Q+ ++HE + F+R + FE+LG YY+GP+DGHN
Sbjct: 204 YLSLRE---IGKQFAQRLPRRIHEQAVRAEEFARNMITHG-GTLFEELGFYYVGPIDGHN 259
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------------- 186
L+ L VLK V+ G +L+HV+T+K K P ++
Sbjct: 260 LDHLLPVLKNVRDAKRRGPILVHVVTQKGKGYAPAEVSADKYHGVVKFDVATGAQVKSNA 319
Query: 187 -----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T++F + L D++ M GTG++LF + FP R FDVGIAEQHAVTF
Sbjct: 320 KAPSYTKVFSEALVQEAKKDSKVVAITAAMPAGTGVDLFGELFPDRFFDVGIAEQHAVTF 379
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLA EG KPF AIYS+FLQR +DQV HDV LQKLPVRF +DRAGLVGADGPTH G+FD
Sbjct: 380 AAGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQKLPVRFCMDRAGLVGADGPTHAGSFD 439
Query: 289 TTFMACLPNMVVM 301
F+ C+PNMV+M
Sbjct: 440 IAFLGCIPNMVLM 452
>gi|144900827|emb|CAM77691.1| Deoxyxylulose-5-phosphate synthase [Magnetospirillum
gryphiswaldense MSR-1]
Length = 637
Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 160/373 (42%), Positives = 205/373 (54%), Gaps = 84/373 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAVGRDL G++
Sbjct: 92 IRTLRQGGGLSGFTKRSESAYDPFGAGHSSTSISAGL----------GMAVGRDLKGEDF 141
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL-----------------------KRLHSNP 90
+VI+VI +GA A M YEA+NNAG ++ L + L S P
Sbjct: 142 NVIAVIGDGAMSAGMVYEAMNNAGSMDSRLVVILNDNDMSIAPPVGAMSAYLSRLLSSRP 201
Query: 91 --QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
R ++ + + + E ++R +G FE+LG YY+GP+DGHN
Sbjct: 202 YLSIRHFAKDLAAMLPPPLERAAKRAE--EYARGFVSGG-GTLFEELGFYYVGPIDGHNF 258
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------------------ 184
+ L VLK V+ D VLIHV+T+K + P +
Sbjct: 259 DHLLPVLKNVRDSEDNKPVLIHVVTKKGRGYPPAEQAADKYHGVGKFDVVTGALAKPKAN 318
Query: 185 --QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F + L D+R M GTGL+ F + FP RCFDVGIAEQHAVTFA
Sbjct: 319 APSYTSVFAQALLAEAENDDRVVAITAAMPAGTGLDKFAERFPNRCFDVGIAEQHAVTFA 378
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EG KPFCA+YS+FLQR +DQ+ HDV +QKLPVRFAIDRAGLVGADG TH GAFD
Sbjct: 379 AGLACEGFKPFCALYSTFLQRGYDQLVHDVVIQKLPVRFAIDRAGLVGADGATHAGAFDL 438
Query: 290 TFMACLPNMVVMK 302
++ CLP++V+M
Sbjct: 439 AYLGCLPDIVLMS 451
>gi|319406941|emb|CBI80578.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella sp. 1-1C]
Length = 640
Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 204/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+V+D FG GHSSTSISAGL GMA+ L +
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMAMVSALEAEEK 142
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++ISVI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNIISVIGDGAISAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQEA-FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + SK + F + + F+R AG F++LG YY+GP+DGHN
Sbjct: 203 SYRSLRERVKILSKKLPKFFLEKARYSEEFARSFFAG--GTLFDELGFYYVGPIDGHNFG 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ PD G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVRECPD-GPVLVHVVTHKGKGYPPAEASSDKYHGVNRFDVITGKQVKAQSSS 319
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F + L DN++ G GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 320 LSYTKVFSQALIEEAKHDNKIVGITAAMPNGTGLDSFSEKFPKRMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV LQKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GIACEGYKPFVAIYSTFLQRAYDQIVHDVSLQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+A LP+ VVM
Sbjct: 440 FLATLPDFVVM 450
>gi|121602344|ref|YP_988719.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis
KC583]
gi|421760528|ref|ZP_16197344.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis
INS]
gi|166198602|sp|A1URW6.1|DXS_BARBK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|120614521|gb|ABM45122.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis
KC583]
gi|411174945|gb|EKS44972.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis
INS]
Length = 638
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 165/371 (44%), Positives = 203/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+++D FG GHSSTSISAGL GMA+ L +
Sbjct: 93 IRTLRQEGGLSGFTKRSESIYDPFGAGHSSTSISAGL----------GMAMASALKAEER 142
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
+VI+VI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQE-AFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + SK + F Q + F+R G F++LG YY+GP+DGHN E
Sbjct: 203 SYRHLRERIKLFSKKFPKFFSEQASRSEEFARGFLVG--GTLFDELGFYYVGPIDGHNFE 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP---------------------LKLQQTR 188
L VLK V+A P+ G VL+HV+T K K P +K Q TR
Sbjct: 261 HLLPVLKNVRAYPN-GPVLVHVVTHKGKGYAPAEESADKYHGVNRFDVVTGKQVKAQSTR 319
Query: 189 L-----FCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L F K L D++ M GTGL+ F + F R FDVGIAEQHAVTFAA
Sbjct: 320 LSYTKVFSKALIEEATHDHKIVAITAAMPTGTGLDSFAEKFSDRMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+A LP VVM
Sbjct: 440 FLATLPEFVVM 450
>gi|414171842|ref|ZP_11426753.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia broomeae ATCC
49717]
gi|410893517|gb|EKS41307.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia broomeae ATCC
49717]
Length = 643
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/370 (41%), Positives = 205/370 (55%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 94 IRTLRMGNGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVARDLTGGKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
+VI+VI +G+ A M+YEA+NNAG ++ L + ++ R L +
Sbjct: 144 NVIAVIGDGSMSAGMAYEAMNNAGAMHSRLIVILNDNDMSIAPPVGAMSAYLARLLSGKT 203
Query: 100 FSSKDKKQK---------FGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
++S + K F + + ++R + G FE+LG +Y+GP+DGHNL+
Sbjct: 204 YASAREALKNLAHKLPKFFEDRALRAEEYARGMVTG--GTLFEELGFFYVGPIDGHNLDH 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VL V+ P G +L+HV+T+K K P +
Sbjct: 262 LLPVLTNVRDAPT-GPILVHVVTQKGKGYAPAEASDDKYHAVAKFDVATGAQAKAKSNAP 320
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D++ M GGTG+++F K FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTSVFGQSLVKEARKDDKIVAITAAMPGGTGVDIFGKAFPDRTFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVG DGPTH G+FD +
Sbjct: 381 LATEGFKPFCAIYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGQDGPTHAGSFDNVY 440
Query: 292 MACLPNMVVM 301
+ CLP V+M
Sbjct: 441 LGCLPGFVIM 450
>gi|395792084|ref|ZP_10471523.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|423714132|ref|ZP_17688391.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395421279|gb|EJF87535.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395433003|gb|EJF98977.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 640
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 202/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+V+D FG GHSSTSISAGL GMAV L +
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMAVASALKAEEK 142
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++I+VI +GA A M+YEA+NNAG LN L RL S P
Sbjct: 143 RNIIAVIGDGAMSAGMAYEAMNNAGALNARLIVVLNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEI-DAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + +K KF + + F+R G FE+LG YY+GP+DGHNL+
Sbjct: 203 AYRSLRERIKVLGEKLPKFFLDKARLSEEFARGFLVG--GTLFEELGFYYVGPIDGHNLK 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVREYPH-GPVLVHVVTHKGKGYAPAEASSDKYHGVNRFNIITGQQVKAQSSV 319
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L D+++ G GTGL+ F K FP R FDVGIAEQHAVTFAA
Sbjct: 320 LPYTKVFSKALIEEASHDDKIVGITAAMPTGTGLDAFAKKFPERMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+ LP VVM
Sbjct: 440 FLTTLPEFVVM 450
>gi|407782057|ref|ZP_11129272.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibaculum indicum P24]
gi|407206530|gb|EKE76481.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibaculum indicum P24]
Length = 639
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/374 (42%), Positives = 205/374 (54%), Gaps = 89/374 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL G +N
Sbjct: 93 IRTLRQGGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVARDLQGGDN 142
Query: 54 HVISVIVEGATIARMSYEAINNAG----------------------VLNKALKRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG ++ L RL ++
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGSMDSRLIVILNDNDMSIAPPTGAMSNYLSRLIASKS 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
+R L +EA K +F + + E G + FE++G YIGPVDGH++
Sbjct: 203 YRGL-REAM--KQMASRFPKPLENAARRAEEYARGMVTGGTLFEEMGFLYIGPVDGHDIS 259
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEK-----------------------------EKAML 180
L +LK ++ P+ G VL+HV+TEK KA
Sbjct: 260 HLVPILKSLRDRPEAGPVLLHVVTEKGRGHPFSKDSPEKYHAVQKFDLVTGAQVKAKANA 319
Query: 181 PLKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
P T +F + L D R M GGTGL+ F + FP R FDVGIAEQHAVT
Sbjct: 320 P---SYTNVFAQALIQEAEADERIVAITAAMPGGTGLDKFAERFPDRSFDVGIAEQHAVT 376
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA EG+KPF AIYS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH G+F
Sbjct: 377 FAAGLATEGMKPFAAIYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSF 436
Query: 288 DTTFMACLPNMVVM 301
D ++ CLP+ V+M
Sbjct: 437 DVAYLGCLPDFVLM 450
>gi|262277462|ref|ZP_06055255.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
HIMB114]
gi|262224565|gb|EEY75024.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
HIMB114]
Length = 636
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 165/374 (44%), Positives = 206/374 (55%), Gaps = 89/374 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GM+V RDL GK N
Sbjct: 91 IRTLRQGGGLSGFTKRSESEYDPFGTAHSSTSISAGL----------GMSVARDLDGKTN 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL-----------------------KRLHSNP 90
++ISVI +GA A M+YEA+NNAG ++ L K L N
Sbjct: 141 NIISVIGDGAMSAGMAYEAMNNAGSMDSRLIVILNDNDMSIAPPVGAMSSYLAKLLSGNK 200
Query: 91 Q--FRQLCQEAFSSKDKK--QKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGH 146
FR+ ++ S+K K +K GQ E + R + G FE++G +Y+G VDGH
Sbjct: 201 YIGFREFFKK-LSNKFPKSLKKSIGQAEE---YLRGLAVG--GTLFEEMGFFYVGTVDGH 254
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR------------------ 188
N + L VL+ VK G LIH ITEK K P + + R
Sbjct: 255 NFDHLLPVLENVKNSKHEGPFLIHAITEKGKGYKPAEDSKDRYHGVTKFNVETGEQSKSK 314
Query: 189 --------LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
+F + L D++ M GTG+N+FQ FP R FDVGIAEQHAVT
Sbjct: 315 SNIPSYTSVFGETLTKHAEKDSKIVTVTAAMPSGTGVNIFQNKFPKRSFDVGIAEQHAVT 374
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA EG KP+ AIYS+FLQR +DQV HDV +QKLPVRFAIDRAGLVGADG TH GAF
Sbjct: 375 FAAGLATEGYKPYAAIYSTFLQRAYDQVVHDVAIQKLPVRFAIDRAGLVGADGSTHAGAF 434
Query: 288 DTTFMACLPNMVVM 301
D T+++ LPN +VM
Sbjct: 435 DITYLSTLPNFIVM 448
>gi|357466311|ref|XP_003603440.1| hypothetical protein MTR_3g107740 [Medicago truncatula]
gi|355492488|gb|AES73691.1| hypothetical protein MTR_3g107740 [Medicago truncatula]
Length = 708
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 157/379 (41%), Positives = 202/379 (53%), Gaps = 91/379 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+TIR+ GL E+ +DAFG GH SISAGL GMAV RD+ G+
Sbjct: 152 MKTIRKKNGLSGFTSRFESEYDAFGAGHGCNSISAGL----------GMAVARDIKGRRE 201
Query: 54 HVISVIVEGATIARMSYEAINNAG------------------------------VLNKAL 83
V++VI T++ YEA++NAG L+ L
Sbjct: 202 RVVAVISNWTTMSGQVYEAMSNAGYLDSNLVVILNDSRHSLLPKIEDGSKTSVNALSSTL 261
Query: 84 KRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYY 139
RL S+ FR+ + A K ++ G MHE +D ++R + + FE+LGLYY
Sbjct: 262 SRLQSSKSFRKFREAA---KGVTKRIGRGMHELAAKVDEYARGMMGPPGSTLFEELGLYY 318
Query: 140 IGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAMLPLKLQQTRLFCK 192
IGPVDGHN+EDL VL++V ++ G VLIHVIT + +K+ + K Q +
Sbjct: 319 IGPVDGHNIEDLISVLQEVASLDSMGPVLIHVITNENQVEEHNKKSYMTDKQQDESVSFD 378
Query: 193 ILDNR------------------------------MGGGTGLNLFQKHFPIRCFDVGIAE 222
+LDN + L LF + FP R F+VGIAE
Sbjct: 379 LLDNAGRLQTYGDCFVESLVAEAEKDKDIVVVHAGITTEPSLKLFMEKFPDRIFNVGIAE 438
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFA+GL+ GLKPFC I SSFLQR +DQV HDVD QK+PVRF I AGLVG+DGP
Sbjct: 439 QHAVTFASGLSCGGLKPFCIIPSSFLQRAYDQVVHDVDQQKVPVRFVITSAGLVGSDGPL 498
Query: 283 HCGAFDTTFMACLPNMVVM 301
CGAFD TFM+CLPNM+VM
Sbjct: 499 QCGAFDITFMSCLPNMIVM 517
>gi|158424735|ref|YP_001526027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azorhizobium caulinodans
ORS 571]
gi|172047993|sp|A8IBS1.1|DXS_AZOC5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|158331624|dbj|BAF89109.1| deoxyxylulose-5-phosphate synthase [Azorhizobium caulinodans ORS
571]
Length = 641
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 202/372 (54%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL G +
Sbjct: 93 IRTLRQGGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVARDLSGGDR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG ++ L RL S
Sbjct: 143 NVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNDMSIAPPTGAMSAYLARLISGRT 202
Query: 92 F---RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+ R++ ++ K K G E F+R G FE++G YY+GP+DGHNL
Sbjct: 203 YLSLREIGKQLAGHLPKFVKDGAAKAE--EFARGFWTG--GTLFEEMGFYYVGPIDGHNL 258
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
E L VLK V+ G +L+HV+T+K K P +
Sbjct: 259 EHLLPVLKNVRDA-KTGPILVHVVTQKGKGYPPAEASADKYHGVVKFDVVTGAQVKAKSN 317
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
TR+F + L D++ M GTGL+LF + FP R FDVGIAEQHAVTFA
Sbjct: 318 APSYTRVFAETLIDEARRDDKVVAITAAMPSGTGLDLFGQAFPQRTFDVGIAEQHAVTFA 377
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAAEG +PFCA+YS+FLQR +DQV HDV LQ LPVRFAIDRAGLVGADG TH GAFD
Sbjct: 378 AGLAAEGYRPFCALYSTFLQRGYDQVVHDVALQGLPVRFAIDRAGLVGADGATHAGAFDL 437
Query: 290 TFMACLPNMVVM 301
+ CLP VM
Sbjct: 438 AMLTCLPGFTVM 449
>gi|312114711|ref|YP_004012307.1| deoxyxylulose-5-phosphate synthase [Rhodomicrobium vannielii ATCC
17100]
gi|311219840|gb|ADP71208.1| deoxyxylulose-5-phosphate synthase [Rhodomicrobium vannielii ATCC
17100]
Length = 643
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 157/372 (42%), Positives = 207/372 (55%), Gaps = 83/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAV DL G++
Sbjct: 94 IRTLRQPGGLSGFTKRSESEYDPFGAGHSSTSISAGL----------GMAVASDLKGEDG 143
Query: 54 --HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSN 89
+VI+VI +G+ A M+YEA+NNAG L+ L R+HS+
Sbjct: 144 GRNVIAVIGDGSMSAGMAYEAMNNAGAMDARLIIILNDNDMSIAPPVGALSNYLARMHSS 203
Query: 90 PQFRQLCQEAFSSKDKKQK-FGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
F ++ A + + K + + + F+R + G FE+LG+YY+GP+DGH+L
Sbjct: 204 ETFLKVRDIAKNMAQRLPKIWERRAARAEEFTRHLFTG--GSLFEELGIYYVGPIDGHDL 261
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK------------------------- 183
+ L VL+ V+ G VLIH +T+K K P +
Sbjct: 262 DILLPVLRNVRDSAHKGPVLIHCVTQKGKGYEPAEKAPDKYHGVTKFNVITGAQDKVKAS 321
Query: 184 -LQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T++F + L + M GGTGL+LF+ FP R FDVGIAEQHAVTFA
Sbjct: 322 APSYTKVFAQSLLDEARKDDTIVAISAAMPGGTGLDLFESEFPERTFDVGIAEQHAVTFA 381
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AG+A EG+KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFA+DRAGLVGADG TH G FD
Sbjct: 382 AGMATEGMKPFCAIYSTFLQRGYDQLIHDVSVQHLPVRFALDRAGLVGADGATHAGTFDL 441
Query: 290 TFMACLPNMVVM 301
F+ CLP+ VVM
Sbjct: 442 AFLCCLPDFVVM 453
>gi|114706808|ref|ZP_01439708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fulvimarina pelagi
HTCC2506]
gi|114537756|gb|EAU40880.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fulvimarina pelagi
HTCC2506]
Length = 635
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 162/374 (43%), Positives = 202/374 (54%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRT+RQ GL E+ +D FG GHSSTSISAGL GMAV RDL G N
Sbjct: 90 MRTVRQEGGLSGFAKRTESEYDPFGAGHSSTSISAGL----------GMAVARDLAGAKN 139
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+V+SVI +GA A M+YEA+NNAG L+ L RL S
Sbjct: 140 NVVSVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSHYLARLVSGKT 199
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R L A +D Q+ E +R+ E +R F FE+LG YYIGP+DGH
Sbjct: 200 YRTLRNRA---RDFTQRLPDFFRE---GARKTEEYTRGFFTGGTLFEELGFYYIGPIDGH 253
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------- 183
+L+ L VLK V+ + G +L+HV+T+K K P +
Sbjct: 254 DLDALVPVLKNVRDA-ETGPILVHVVTKKGKGYEPAESSADKYHGVSKFDVITGAQSKSK 312
Query: 184 --------------LQQTRLFCKIL--DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
+++ R KI+ + M GTGL+ F + +P R FDVGIAEQHAVT
Sbjct: 313 GNAPSYTNVFASSLIEEARHDDKIVAVNAAMPAGTGLDKFGEAYPTRTFDVGIAEQHAVT 372
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
F AGLA EG KPF AIYS+FLQR +DQV HDV +Q LPVRFAIDRAG VGADG TH G+F
Sbjct: 373 FCAGLATEGYKPFAAIYSTFLQRAYDQVVHDVAIQHLPVRFAIDRAGFVGADGATHAGSF 432
Query: 288 DTTFMACLPNMVVM 301
DT ++ LP VVM
Sbjct: 433 DTAYLCPLPGFVVM 446
>gi|452750501|ref|ZP_21950248.1| 1-deoxy-D-xylulose 5-phosphate synthase [alpha proteobacterium
JLT2015]
gi|451961695|gb|EMD84104.1| 1-deoxy-D-xylulose 5-phosphate synthase [alpha proteobacterium
JLT2015]
Length = 615
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/372 (43%), Positives = 208/372 (55%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRTIRQ GL E+ +D FG HSSTSISA L G AV L G++
Sbjct: 68 MRTIRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GFAVANKLSGRDG 117
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L R+ S+ +
Sbjct: 118 KAIAVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDNDMSIAPPVGGLSAYLARMVSSSE 177
Query: 92 F---RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+ R L ++ F+S+ K +F + + ++R + G FE+LG YY+GP+DGHNL
Sbjct: 178 YLGLRSLAKK-FASRLHK-RFYNAASKAEEYARGMATG--GTLFEELGFYYVGPIDGHNL 233
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
+ L VL+ V+ + G +L+HV+T+K P +
Sbjct: 234 DHLIPVLENVRD-SEQGPILVHVVTKKGHGYAPAEQSADKYHGVTKFDVVSGEMAPKKAG 292
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F K L D+R M GGTG++ F +HFP R FDVGIAEQH VTFA
Sbjct: 293 PPSYTGVFAKALIAEAERDDRVCAITAAMPGGTGVDKFAQHFPERSFDVGIAEQHGVTFA 352
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA+G++PF AIYS+FLQR FDQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 353 AGLAAQGMRPFAAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGQTHAGSFDV 412
Query: 290 TFMACLPNMVVM 301
T++A LPNMVVM
Sbjct: 413 TYLATLPNMVVM 424
>gi|395784738|ref|ZP_10464560.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella melophagi K-2C]
gi|395421998|gb|EJF88220.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella melophagi K-2C]
Length = 640
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 162/371 (43%), Positives = 203/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+V+D+FG GHSSTSISAGL GMAV L +
Sbjct: 93 IRTLRQDGGLSGFTKRSESVYDSFGAGHSSTSISAGL----------GMAVASMLKAEER 142
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++I VI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNIICVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSRP 202
Query: 91 QFRQLCQEA-FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L ++ SK + F + + F+R G FE+LG YY+GP+DGHN+
Sbjct: 203 SYRSLREQVKILSKKLPKFFSDKARLSEEFARGFLVG--GSLFEELGFYYVGPIDGHNMN 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P+ G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVREYPN-GPVLVHVVTHKGKGYAPAEVSSDKYHGVNRFDVVTGKQVKTQSKF 319
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L D++ M GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 320 LPYTKVFSKALIEEASHDDKIVAITAAMPTGTGLDSFAEKFPDRMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+A LP VVM
Sbjct: 440 FLATLPEFVVM 450
>gi|374293689|ref|YP_005040712.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azospirillum lipoferum 4B]
gi|357427092|emb|CBS90030.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum lipoferum 4B]
Length = 637
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 201/370 (54%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG GHSSTSISAGL GMAV + G+
Sbjct: 93 IRTLRMGGGLSGFTKRSESEYDPFGAGHSSTSISAGL----------GMAVASRIKGEQR 142
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNA G ++ L RL S+
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAASTKSRLIVILNDNDMSIAPPVGAMSAYLSRLISSKP 202
Query: 92 FRQLCQEAFSSKDK-KQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+ L A D+ + + ++R + G FE+LG YYIGP+DGHNL+
Sbjct: 203 YLSLRHLAKEIADQLPRPLRNAARRAEEYARGMVTG--GTLFEELGFYYIGPIDGHNLDH 260
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VL+ V+ D VLIHV+T+K K P +
Sbjct: 261 LLPVLQNVRDADDDKPVLIHVVTKKGKGYGPAEESADKLHAVAKFDVVTGTQSKPKSNAP 320
Query: 187 --TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
TR+F + L M GTGL+LF + FP RCFDVGIAEQHAVTFAAG
Sbjct: 321 TYTRVFAQSLIAEAAADPSIVGITAAMPSGTGLDLFGERFPDRCFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+A EG KPFCAIYS+FLQR +DQV HDV LQ LPVRFA+DRAGLVGADG TH G+FDT +
Sbjct: 381 MATEGFKPFCAIYSTFLQRAYDQVIHDVVLQHLPVRFALDRAGLVGADGATHAGSFDTAY 440
Query: 292 MACLPNMVVM 301
+ CLP++V+M
Sbjct: 441 LGCLPDIVLM 450
>gi|395766960|ref|ZP_10447498.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella doshiae NCTC
12862]
gi|395415572|gb|EJF82006.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella doshiae NCTC
12862]
Length = 640
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 162/371 (43%), Positives = 204/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGK-N 52
+RT+RQ GL E+V+D FG GHSSTSISAGL GMAV L +
Sbjct: 93 IRTLRQEDGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMAVASALKAEMR 142
Query: 53 NHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
+VI+VI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQEAFSSKDKKQKFG-GQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + +K KF + + F+R G F++LG YY+GP+DGHNL
Sbjct: 203 SYRNLRERVKMFSEKLPKFFLDKARRSEEFARSFFVG--GTLFDELGFYYVGPIDGHNLN 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP---------------------LKLQQ-- 186
L VLK V+ P+ G VL+H++T K K P +K+Q
Sbjct: 261 HLLPVLKNVREYPN-GPVLVHIVTHKGKGYAPAEASSDKYHGVNSFDIVTGKQIKIQSNA 319
Query: 187 ---TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T++F K L D+++ G GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 320 LSYTKVFSKALIEEASHDDKIVGITAAMPTGTGLDSFAEKFPERMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+ LP VVM
Sbjct: 440 FLTTLPEFVVM 450
>gi|423711167|ref|ZP_17685487.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella washoensis
Sb944nv]
gi|395415081|gb|EJF81516.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella washoensis
Sb944nv]
Length = 640
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 162/371 (43%), Positives = 201/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+V+D FG GHSSTSISAGL GMAV L +
Sbjct: 93 IRTLRQDGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMAVASALKAEER 142
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++I+VI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQEAFSSKDKKQKFG-GQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + +K KF + + F+R G F++LG YY+GP+DGHNL
Sbjct: 203 SYRNLRERVKILSEKLPKFFLDKARRSEEFARGFLVG--GTLFDELGFYYVGPIDGHNLG 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ PD G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVREYPD-GPVLVHVVTHKGKGYAPAEASSDKYHGVNRFDIVTGKQIKTQSNA 319
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L D++ M GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 320 LSYTKVFSKALIEEASHDDKIVSITAAMPTGTGLDSFAEKFPERMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+ LP VVM
Sbjct: 440 FLTTLPEFVVM 450
>gi|418054734|ref|ZP_12692790.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium
denitrificans 1NES1]
gi|353212359|gb|EHB77759.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium
denitrificans 1NES1]
Length = 647
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 157/376 (41%), Positives = 202/376 (53%), Gaps = 94/376 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RD+ G +N
Sbjct: 98 IRTLRQANGLSGFTKRTESEYDPFGAAHSSTSISAGL----------GMAVARDMSGGDN 147
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+V+ VI +GA A M+YEA+NNAG N+ L R S+
Sbjct: 148 NVVCVIGDGAMSAGMAYEALNNAGARNERLIVVLNDNDMSIAPPTGALSSYLARTTSSAS 207
Query: 92 F-------RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVD 144
+ +QL Q S +++ +M E ++R + G +FE+LG YY+GP+D
Sbjct: 208 YFKVRDIAKQLAQRLPKSWERR---AARMEE---YTRNLWQG--GAWFEELGFYYVGPID 259
Query: 145 GHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------ 186
GH+L L VLK V+ G +L+HV+T+K K P +
Sbjct: 260 GHDLGQLLPVLKNVRDAKH-GPILVHVMTKKGKGYAPAEASPDKYHGVAKFNVVTGVQVK 318
Query: 187 --------TRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHA 225
TR+F L M GTGL++F + FP R FDVGIAEQHA
Sbjct: 319 PQAAAPSYTRVFADSLIQEAKKDPKIVAITAAMPDGTGLDVFGREFPDRTFDVGIAEQHA 378
Query: 226 VTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCG 285
VTFAAGLA EG+KPF AIYS+FLQR +DQV HDV +Q LPVRFAIDRAG VGADG TH G
Sbjct: 379 VTFAAGLATEGMKPFAAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGFVGADGATHAG 438
Query: 286 AFDTTFMACLPNMVVM 301
+FD ++ CLPN V+M
Sbjct: 439 SFDLAYLGCLPNFVIM 454
>gi|395781816|ref|ZP_10462227.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella
rattimassiliensis 15908]
gi|395420471|gb|EJF86747.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella
rattimassiliensis 15908]
Length = 635
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 202/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG-KN 52
+RT+RQ GL E+V+D FG GHSSTSISAGL GMAV L K
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMAVASALRAEKR 142
Query: 53 NHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
+VI+VI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVVLNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQEAFSSKDKKQKFG-GQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + +K KF + + +R + G F +LG YY+GP+DGHNLE
Sbjct: 203 SYRHLRERVKLLSEKLPKFFLDKARRSEGIARGLLVG--GTLFNELGFYYVGPIDGHNLE 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK ++ P G VL+HVIT K K P +
Sbjct: 261 HLLPVLKNIRECPK-GPVLVHVITHKGKGYPPAEASFDKYHGVNRFDITTGKQVKVSSNI 319
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L D+++ G GTGL+ F + FP + FDVGIAEQHAVTFAA
Sbjct: 320 LSYTKVFSKALLEEACHDDKIIGITAAMPTGTGLDSFAEKFPEKMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GLACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+A LP +VM
Sbjct: 440 FLATLPEFIVM 450
>gi|395787324|ref|ZP_10466925.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella birtlesii
LL-WM9]
gi|395411748|gb|EJF78269.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella birtlesii
LL-WM9]
Length = 638
Score = 256 bits (655), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 162/371 (43%), Positives = 202/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+V+D FG GHSSTSISAGL GM+V L +
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMSVASALKAETK 142
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
+VI++I +GA A M+YEA+NNAG LN L RL S P
Sbjct: 143 RNVIAIIGDGAMSAGMAYEAMNNAGALNARLIVILNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEI-DAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + +K +F + + F+R + G FE+LG YY+GP+DGHNL+
Sbjct: 203 AYRSLRERVKLLGEKLPRFFLDKARLSEEFARGLLVG--GTLFEELGFYYVGPIDGHNLK 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVREYPH-GPVLVHVVTHKGKGYAPAEASSDKYHGVNRFDITTGKQVKTPSRA 319
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L D++ M GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 320 LPYTKVFSKALIEEATHDDKIVSITAAMPTGTGLDAFAEKFPKRMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G FD
Sbjct: 380 GIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGNFDIV 439
Query: 291 FMACLPNMVVM 301
F+A LP VVM
Sbjct: 440 FLATLPEFVVM 450
>gi|395791326|ref|ZP_10470784.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella alsatica IBS
382]
gi|395408689|gb|EJF75299.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella alsatica IBS
382]
Length = 640
Score = 256 bits (655), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 161/371 (43%), Positives = 202/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+V+D FG GHSSTSISAGL GMAV L +
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMAVASALKQEER 142
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++I+VI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNIIAVIGDGAMSAGMAYEAMNNAGALDARLIIVLNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQEA-FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + SK + F + + F+R + G FE+LG YY+GP+DGHNL
Sbjct: 203 AYRSLRERVKVLSKKLPKFFLEKARRSEEFARGLLVG--GTLFEELGFYYVGPIDGHNLR 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVREYPS-GPVLVHVVTHKGKGYAPAEASSDKYHGVNRFDIITGQQVKAPSNA 319
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L D++ M GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 320 LPYTKVFSKALIEEAVHDDKIVSITAAMPTGTGLDAFAEKFPERMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV +Q+LPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQRLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F++ LP VVM
Sbjct: 440 FLSTLPEFVVM 450
>gi|240850082|ref|YP_002971475.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Bartonella grahamii
as4aup]
gi|240267205|gb|ACS50793.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Bartonella grahamii
as4aup]
Length = 635
Score = 256 bits (654), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 162/371 (43%), Positives = 203/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+V+D FG GHSSTSISAGL GMAV L +
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMAVASALKAETR 142
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++I+VI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVVLNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQEAFSSKDKKQKFG-GQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + +K KF + + F+R + G F++LG YY+GP+DGHNL
Sbjct: 203 SYRHLRERVKMLSEKLPKFFLDKARRSEEFARGLLVG--GTLFDELGFYYLGPIDGHNLG 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVREYPS-GPVLVHVVTHKGKGYPPAEASPDKYHGVNRFDVTTGKQVKASSNI 319
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L D+++ G GTGL+ F K FP + FDVGIAEQHAVTFAA
Sbjct: 320 LPYTKVFSKALIEEARHDDKIVGITAAMPTGTGLDSFAKKFPEKMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GLACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F++ LP VVM
Sbjct: 440 FLSTLPGFVVM 450
>gi|319408216|emb|CBI81869.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella schoenbuchensis
R1]
Length = 640
Score = 256 bits (654), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 161/371 (43%), Positives = 203/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+V+D+FG GHSSTSISAGL GMAV L +
Sbjct: 93 IRTLRQDGGLSGFTKRSESVYDSFGAGHSSTSISAGL----------GMAVASMLKAEER 142
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++I VI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNIICVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSRP 202
Query: 91 QFRQLCQEA-FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L ++ SK + F + + F+R G FE+LG YY+GP+DGHN+
Sbjct: 203 SYRSLREQVKILSKKLPKFFSDKARLSEEFARGFLVG--GSLFEELGFYYVGPIDGHNMN 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P+ G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVREYPN-GPVLVHVVTHKGKGYAPAEVSSDKYHGVNRFDVVTGKQVKTQSKF 319
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L D++ M GTGL+ F + FP + FDVGIAEQHAVTFAA
Sbjct: 320 LPYTKVFSKALIEEASHDDKIVAITAAMPTGTGLDSFAEKFPDKMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+A LP VVM
Sbjct: 440 FLATLPEFVVM 450
>gi|300023488|ref|YP_003756099.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans
ATCC 51888]
gi|299525309|gb|ADJ23778.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans
ATCC 51888]
Length = 635
Score = 256 bits (654), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 155/370 (41%), Positives = 203/370 (54%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L GMAV RDL G +N
Sbjct: 91 IRTLRQPGGLSGFTKRDESPYDPFGAAHSSTSISAAL----------GMAVARDLSGGSN 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG N+ L R S+
Sbjct: 141 NVIAVIGDGAMSAGMAYEAMNNAGARNERLIVILNDNDMSIAPPTGALSAYLARATSSGT 200
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+ L A +K +++ + ++ ++R I G +FE+LG YY+GP+DGH+
Sbjct: 201 YLHLRDYAKQLAKMLPKQWERRAARVEEYTRHIWQG--GAWFEELGFYYVGPIDGHDFSQ 258
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VLK V+ + +L+HV+T+K K P +
Sbjct: 259 LLPVLKNVRDA-EQAPILVHVVTKKGKGYAPAEAADDKYHGVNKFNVVTGAQVKPKPNAP 317
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T++F L D+R M GTGL+ F K FP R FDVGIAEQHAVTFAAG
Sbjct: 318 SYTKVFADSLIAEARKDDRIVAITAAMPSGTGLDYFGKEFPERTFDVGIAEQHAVTFAAG 377
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPF IYS+FLQR +DQV HDV +QKLPVRFA+DRAGLVGADG TH G+FD ++
Sbjct: 378 LATEGYKPFATIYSTFLQRAYDQVVHDVAIQKLPVRFALDRAGLVGADGATHAGSFDISY 437
Query: 292 MACLPNMVVM 301
+ CLP+ V+M
Sbjct: 438 LGCLPDFVIM 447
>gi|451940393|ref|YP_007461031.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella australis
Aust/NH1]
gi|451899780|gb|AGF74243.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella australis
Aust/NH1]
Length = 635
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 201/372 (54%), Gaps = 85/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+V+D FG GHSSTSISAGL GMAV L G+
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMAVASALKGEGR 142
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++ISVI +GA A M+YEA+NNAG LN L L S P
Sbjct: 143 RNIISVIGDGAMSAGMAYEAMNNAGALNARLIVILNDNDMSIAPPTGAMSAYLACLVSRP 202
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNL 148
+R + K KF E S E+ G F+ LG YY+GP+DGHNL
Sbjct: 203 SYRHFRERVKILNKKLPKF---FSEKARRSEELARGFLVGGTLFDALGFYYVGPIDGHNL 259
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK------------------------- 183
L VLK V+ P+ G VL+H++T K K P +
Sbjct: 260 GHLLPVLKNVREYPN-GPVLVHIVTHKGKGYAPAEASSHRYHGVSRFDVITGKQIKARSN 318
Query: 184 -LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
L T++F K L D++ M GTGL++F + FP R FDVGIAEQHAVTFA
Sbjct: 319 CLPYTKVFSKALIEEASYDDKIVAVTAAMPTGTGLDVFAEKFPGRMFDVGIAEQHAVTFA 378
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AG+A EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADGPTH G+FD
Sbjct: 379 AGVACEGYKPFVAIYSTFLQRSYDQIIHDVSIQKLPVRFAIDRAGFVGADGPTHAGSFDI 438
Query: 290 TFMACLPNMVVM 301
F+A LP+ +VM
Sbjct: 439 IFLAALPDFIVM 450
>gi|451941627|ref|YP_007462264.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451901014|gb|AGF75476.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
Length = 638
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 201/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+V+D FG GHSSTSISAGL GMAV L +
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMAVVSALKAEEK 142
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++I+VI +GA A M+YEA+NNAG LN L RL S P
Sbjct: 143 RNIITVIGDGAMSAGMAYEAMNNAGALNARLIVVLNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEI-DAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + +K KF + + F+R G FE+LG YY+GP+DGHNL+
Sbjct: 203 AYRSLRERIKVLGEKLPKFFLDKARLSEEFARGFLVG--GTLFEELGFYYVGPIDGHNLK 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVREYPH-GPVLVHVVTHKGKGYAPAEASSDKYHGVNRFDIVTGKQVKAQSNV 319
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L D++ M GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 320 LSYTKVFSKALIEEATHDDKIVSITAAMPTGTGLDAFAEKFPERMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+ LP VVM
Sbjct: 440 FLTTLPEFVVM 450
>gi|418055612|ref|ZP_12693666.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium
denitrificans 1NES1]
gi|353209890|gb|EHB75292.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium
denitrificans 1NES1]
Length = 635
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 202/370 (54%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L GMAV RDL G N
Sbjct: 91 IRTLRQPGGLSGFTKRDESPYDPFGAAHSSTSISAAL----------GMAVARDLNGGKN 140
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
VI+VI +GA A M+YEA+NNAG L+ L R+ S+
Sbjct: 141 SVIAVIGDGAMSAGMAYEALNNAGARDERLIVILNDNDMSIAPPTGALSAYLARVTSSGT 200
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+ L A +K +++ + ++ ++R I G +FE+LG YY+GP+DGH+
Sbjct: 201 YLHLRDYAKQLAKMLPKQWERRAARVEEYTRHIWQG--GTWFEELGFYYVGPIDGHDFNQ 258
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VLK V+ + +L+HV+T+K K P +
Sbjct: 259 LLPVLKNVRDA-EQAPILVHVVTKKGKGYAPAEAADDKYHGVNKFNVITGAQVKPKPNAP 317
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T++F L D R M GTGL+ F K FP R FDVGIAEQHAVTFAAG
Sbjct: 318 SYTKVFADSLIDEARKDKRIVAITAAMPSGTGLDHFGKEFPDRTFDVGIAEQHAVTFAAG 377
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAAEG KPF AIYS+FLQR +DQV HDV +QKLPVRFA+DRAGLVGADG TH G+FD +
Sbjct: 378 LAAEGYKPFAAIYSTFLQRAYDQVVHDVAIQKLPVRFALDRAGLVGADGATHAGSFDIAY 437
Query: 292 MACLPNMVVM 301
+ CLP+ V+M
Sbjct: 438 LGCLPDFVIM 447
>gi|255546609|ref|XP_002514364.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
gi|223546820|gb|EEF48318.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
Length = 717
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 157/379 (41%), Positives = 201/379 (53%), Gaps = 91/379 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +D FG GH S+SAGL GMAV RD+ GK
Sbjct: 162 MHTLRQKNGLSGFTSQSESEYDPFGAGHGCNSVSAGL----------GMAVARDMKGKRE 211
Query: 54 HVISVIVEGATIARMSYEAINNAG------------------------------VLNKAL 83
V++VI G T+A YEA++NAG L+ L
Sbjct: 212 RVVTVISNGTTMAGQVYEAMSNAGYIDSNMIVILNDSRHSLHPKIEEGPKTSLNALSSTL 271
Query: 84 KRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYY 139
RL S+ FR+ + A K ++ G MHE +D ++R + + FE+LGLYY
Sbjct: 272 SRLQSSKSFRKFREAA---KGVTKRIGRGMHELAAKVDEYARGMIGPLGSTLFEELGLYY 328
Query: 140 IGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITE-------KEKAMLPLKLQQ------ 186
IGPVDGHN+EDL VL++V ++ G VLIHV+TE K+K LQ+
Sbjct: 329 IGPVDGHNIEDLVCVLQEVASLDSMGPVLIHVVTEENRRRDNKQKIDTLENLQEGSSNSD 388
Query: 187 -------TRLFCK-----------------ILDNRMGGGTGLNLFQKHFPIRCFDVGIAE 222
TR + I+ M T L Q+ +P R FDVG+AE
Sbjct: 389 PFLYSIHTRTYSDCFVEALIMEAEKDKDIVIVHAGMEMETAFQLIQERYPDRFFDVGMAE 448
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTF+AGL+ GLKPFC I S+FLQR +DQV HDVD Q++PVRF I AGLVG+DGP
Sbjct: 449 QHAVTFSAGLSCGGLKPFCIIPSTFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGSDGPM 508
Query: 283 HCGAFDTTFMACLPNMVVM 301
CGAFD TFM+CLPNM+VM
Sbjct: 509 QCGAFDITFMSCLPNMIVM 527
>gi|395780213|ref|ZP_10460680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella washoensis
085-0475]
gi|395419480|gb|EJF85780.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella washoensis
085-0475]
Length = 640
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 161/371 (43%), Positives = 200/371 (53%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+V+D FG GHSSTSISAGL GMAV L +
Sbjct: 93 IRTLRQDGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMAVASALKAEER 142
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++I+VI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQEAFSSKDKKQKFG-GQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + +K KF + + F+R G F++LG YY+GP+DGHN
Sbjct: 203 SYRNLRERVKILSEKLPKFFLDKARRSEEFARGFLVG--GTLFDELGFYYVGPIDGHNFG 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ PD G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVREYPD-GPVLVHVVTHKGKGYAPAEASSDKYHGVNRFDIVTGKQIKTQSNA 319
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L D++ M GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 320 LSYTKVFSKALIEEASHDDKIVSITAAMPTGTGLDSFAEKFPERMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+ LP VVM
Sbjct: 440 FLTTLPEFVVM 450
>gi|395778555|ref|ZP_10459067.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella elizabethae
Re6043vi]
gi|423715133|ref|ZP_17689357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella elizabethae
F9251]
gi|395417763|gb|EJF84100.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella elizabethae
Re6043vi]
gi|395430617|gb|EJF96659.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella elizabethae
F9251]
Length = 635
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 161/371 (43%), Positives = 203/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGK-N 52
+RT+RQ GL E+V+D FG GHSSTSISAGL GMAV L +
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMAVASALKAEIR 142
Query: 53 NHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++I+VI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVVLNDNDMSIAPPTGAMSGHLARLVSRP 202
Query: 91 QFRQLCQEAFSSKDKKQKFG-GQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + +K KF + + F+R + G F++LG YY+GP+DGHN
Sbjct: 203 SYRHLRERVKILSEKLPKFFLDKARRSEEFARGLLVG--GTLFDELGFYYVGPIDGHNFG 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P+ G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVRQYPN-GPVLVHVVTHKGKGYPPAEASSDKYHGVNRFDVTTGRQVKAPSNI 319
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L D+++ G GTGL+ F + FP + FDVGIAEQHAVTFAA
Sbjct: 320 LPYTKVFSKALIEEASHDDKIVGITAAMPTGTGLDAFAEKFPKKMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GLACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+A LP VVM
Sbjct: 440 FLATLPEFVVM 450
>gi|83591394|ref|YP_425146.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC
11170]
gi|118595483|sp|Q2RYD6.1|DXS1_RHORT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
synthase 1; Short=DXPS 1
gi|83574308|gb|ABC20859.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC
11170]
Length = 645
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 162/373 (43%), Positives = 205/373 (54%), Gaps = 86/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMA+G L G
Sbjct: 94 IRTLRQGGGLSGFTLREESPYDPFGAGHSSTSISAGL----------GMAIGSALAGDAR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
V++VI +G+ A M+YEA+NNAG ++ L RL S+
Sbjct: 144 DVVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDNDMSIAPPVGAMSAYLSRLLSSKS 203
Query: 92 F---RQLCQEAFSS-KDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
+ R L +E + D ++ + E ++R + G FE+LG YY+GP+DGH
Sbjct: 204 WLSIRTLAKEIVARLPDALERTAKRAEE---YARGMVTGG-GTLFEELGFYYVGPIDGHR 259
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-----------------LQQ---- 186
++ L VL+ V+ G VLIHV+T+K K P + +Q+
Sbjct: 260 MDHLVPVLRNVREAGRDGPVLIHVVTQKGKGYAPAENAPDKYHGVSRFNVVTGVQEKAKP 319
Query: 187 -----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T +F K L D+R M GGTGL+ +P RCFDVGIAEQHAVTF
Sbjct: 320 QAPSYTAVFGKQLVAAAAKDHRIVGVTAAMPGGTGLDKLATAYPQRCFDVGIAEQHAVTF 379
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLA EGLKPF A+YSSFLQR +DQV HDV LQKLPVRFAIDRAG VGADG TH G FD
Sbjct: 380 AAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADGATHGGVFD 439
Query: 289 TTFMACLPNMVVM 301
F+ CLPN+VVM
Sbjct: 440 MAFLGCLPNLVVM 452
>gi|319405367|emb|CBI78984.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella sp. AR 15-3]
Length = 640
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 161/371 (43%), Positives = 201/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+V+D FG GHSSTSISAGL GMA+ L +
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMAIVSALEAEER 142
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++ISVI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNIISVIGDGAISAGMAYEAMNNAGALDARLIVILNDNDMSIASPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQE-AFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + SK + F + + F+R G F++LG YY+GP+DGHN
Sbjct: 203 SYRNLRERIKILSKKLPKFFLEKARYSEEFARSFFVG--GTLFDELGFYYVGPIDGHNFG 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P+ G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVRECPN-GPVLVHVVTHKGKGYPPAEASSDKYHGVNRFDVITGKQVKAQSNS 319
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F + L DN+ M GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 320 LSYTKVFSQALIEEAQHDNKIIGITAAMPNGTGLDFFSEKFPKRMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV LQKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GIACEGYKPFVAIYSTFLQRAYDQIIHDVSLQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+ LP+ VVM
Sbjct: 440 FLTTLPDFVVM 450
>gi|170744434|ref|YP_001773089.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium sp. 4-46]
gi|168198708|gb|ACA20655.1| deoxyxylulose-5-phosphate synthase [Methylobacterium sp. 4-46]
Length = 663
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 161/375 (42%), Positives = 208/375 (55%), Gaps = 83/375 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL + A R +
Sbjct: 93 IRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSISAGLGMAVARDLAEAAARARGETPERR 152
Query: 54 HVISVIVEGATIARMSYEAINNAGVL--------------------NKALKRLHSNPQFR 93
+V++VI +G+ A M+YEA+NNAG L + L RL S +R
Sbjct: 153 NVVAVIGDGSISAGMAYEAMNNAGALRSRLVVILNDMSIAPPVGAMSAYLARLVSGDTYR 212
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI--------DAFSREIEAGSRACFFEDLGLYYIGPVDG 145
L +D ++FG + + + ++R I AG FE+LG +Y+GP+DG
Sbjct: 213 SL-------RDTARQFGRLLPKALYDTAVRAEEYARGILAGG-GTMFEELGFHYVGPIDG 264
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------QQ--- 186
HNL+ L +LK V+ P+ G VL+HV+T+K K P + QQ
Sbjct: 265 HNLDHLLPILKNVRDAPE-GPVLVHVVTQKGKGYAPAEAAADRGHAVVKFDVVSGQQVKA 323
Query: 187 -------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAV 226
TR+F + L D++ M GTG++LF K P R FDVGIAEQHAV
Sbjct: 324 KANAPTYTRVFGESLVKAADADDKVVAITAAMPSGTGVDLFAKAHPGRTFDVGIAEQHAV 383
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFAAGLAAEG +PFCAIYS+FLQR +DQV HDV LQ LPVRFA+DRAGLVGADG TH GA
Sbjct: 384 TFAAGLAAEGYRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFALDRAGLVGADGATHAGA 443
Query: 287 FDTTFMACLPNMVVM 301
FD ++ CLPNMVVM
Sbjct: 444 FDLAYLCCLPNMVVM 458
>gi|386348075|ref|YP_006046323.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum F11]
gi|346716511|gb|AEO46526.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum F11]
Length = 622
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 162/373 (43%), Positives = 205/373 (54%), Gaps = 86/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMA+G L G
Sbjct: 71 IRTLRQGGGLSGFTLREESPYDPFGAGHSSTSISAGL----------GMAIGSALAGDAR 120
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
V++VI +G+ A M+YEA+NNAG ++ L RL S+
Sbjct: 121 DVVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDNDMSIAPPVGAMSAYLSRLLSSKS 180
Query: 92 F---RQLCQEAFSS-KDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
+ R L +E + D ++ + E ++R + G FE+LG YY+GP+DGH
Sbjct: 181 WLSIRTLAKEIVARLPDALERTAKRAEE---YARGMVTGG-GTLFEELGFYYVGPIDGHR 236
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-----------------LQQ---- 186
++ L VL+ V+ G VLIHV+T+K K P + +Q+
Sbjct: 237 MDHLVPVLRNVREAGRDGPVLIHVVTQKGKGYAPAENAPDKYHGVSRFNVVTGVQEKAKP 296
Query: 187 -----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T +F K L D+R M GGTGL+ +P RCFDVGIAEQHAVTF
Sbjct: 297 QAPSYTAVFGKQLVAAAAKDHRIVGVTAAMPGGTGLDKLATAYPQRCFDVGIAEQHAVTF 356
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLA EGLKPF A+YSSFLQR +DQV HDV LQKLPVRFAIDRAG VGADG TH G FD
Sbjct: 357 AAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADGATHGGVFD 416
Query: 289 TTFMACLPNMVVM 301
F+ CLPN+VVM
Sbjct: 417 MAFLGCLPNLVVM 429
>gi|148260827|ref|YP_001234954.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium cryptum JF-5]
gi|338979876|ref|ZP_08631214.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium sp. PM]
gi|146402508|gb|ABQ31035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium cryptum JF-5]
gi|338209213|gb|EGO96994.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium sp. PM]
Length = 647
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 156/373 (41%), Positives = 202/373 (54%), Gaps = 85/373 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKN- 52
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL ++
Sbjct: 92 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVARDLKDESP 141
Query: 53 -NHVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSN 89
HVI+VI +GA A M+YEA+NNAG ++ L RL S+
Sbjct: 142 KRHVIAVIGDGAMSAGMAYEAMNNAGASKSRMIVILNDNDMSIAPPVGAMSAYLSRLISS 201
Query: 90 PQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHN 147
F L F+++ K +F + + E G + FE+LG YY+GP+DGHN
Sbjct: 202 RSF--LSIRDFAARMAK-RFPRTLERTAKRAEEYARGILTGGTLFEELGFYYVGPIDGHN 258
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------------- 186
L+ L VL+ ++ I +L+HV+T+K K P +
Sbjct: 259 LDHLLPVLRNLRDIDGDEPILLHVVTQKGKGYAPAEASADKYHGVSKFNVVTGEQTKAPP 318
Query: 187 -----TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T++F + L M GTGL+ F K FP RCFDVGIAEQHAVTF
Sbjct: 319 GPPSYTKVFAQALIAEAEHNPNVVAVTAAMPSGTGLDAFAKRFPDRCFDVGIAEQHAVTF 378
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAG+A EG+ PFCAIYS+FLQR +DQV HDV +Q LPVRFA+DRAGLVGADG TH GA+D
Sbjct: 379 AAGMATEGMAPFCAIYSTFLQRAYDQVVHDVAIQSLPVRFAMDRAGLVGADGATHAGAYD 438
Query: 289 TTFMACLPNMVVM 301
++ CLP MV+M
Sbjct: 439 LAYLGCLPGMVIM 451
>gi|326404221|ref|YP_004284303.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium multivorum
AIU301]
gi|325051083|dbj|BAJ81421.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium multivorum
AIU301]
Length = 647
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 156/373 (41%), Positives = 202/373 (54%), Gaps = 85/373 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKN- 52
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL ++
Sbjct: 92 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVARDLKDESP 141
Query: 53 -NHVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSN 89
HVI+VI +GA A M+YEA+NNAG ++ L RL S+
Sbjct: 142 KRHVIAVIGDGAMSAGMAYEAMNNAGASKSRMIVILNDNDMSIAPPVGAMSAYLSRLISS 201
Query: 90 PQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHN 147
F L F+++ K +F + + E G + FE+LG YY+GP+DGHN
Sbjct: 202 RSF--LSIRDFAARMAK-RFPRTLERTAKRAEEYARGILTGGTLFEELGFYYVGPIDGHN 258
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------------- 186
L+ L VL+ ++ I +L+HV+T+K K P +
Sbjct: 259 LDHLLPVLRNLRDIDGDEPILLHVVTQKGKGYAPAEASADKYHGVSKFNVVTGEQTKAPP 318
Query: 187 -----TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T++F + L M GTGL+ F K FP RCFDVGIAEQHAVTF
Sbjct: 319 GPPSYTKVFAQALIAEAEHNPNVVAVTAAMPSGTGLDAFGKRFPDRCFDVGIAEQHAVTF 378
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAG+A EG+ PFCAIYS+FLQR +DQV HDV +Q LPVRFA+DRAGLVGADG TH GA+D
Sbjct: 379 AAGMATEGMAPFCAIYSTFLQRAYDQVVHDVAIQSLPVRFAMDRAGLVGADGATHAGAYD 438
Query: 289 TTFMACLPNMVVM 301
++ CLP MV+M
Sbjct: 439 LAYLGCLPGMVIM 451
>gi|163797802|ref|ZP_02191748.1| deoxyxylulose-5-phosphate synthase [alpha proteobacterium BAL199]
gi|159176924|gb|EDP61490.1| deoxyxylulose-5-phosphate synthase [alpha proteobacterium BAL199]
Length = 638
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 161/374 (43%), Positives = 200/374 (53%), Gaps = 89/374 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL G+
Sbjct: 93 IRTLRQGGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVARDLKGERF 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+V++VI +GA A M+YEA+NNAG ++ L ++ S+
Sbjct: 143 NVVAVIGDGAMSAGMAYEAMNNAGSMDSRLIVILNDNDMSIAPPVGAMSAYLSQIVSSRS 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
+R L A K Q + + E G + FE+LG Y+GPVDGHNL+
Sbjct: 203 YRSLRHMA---KQVAQHLPKAIERTAKRAEEFARGMVTGGTLFEELGFLYVGPVDGHNLD 259
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEK-----------------------------EKAML 180
L VLK ++ P G VL+HV+TEK KA
Sbjct: 260 HLLPVLKNLRDTPGHGPVLLHVVTEKGRGHPFAETSADKYHAVAKFDVVTGTQAKPKANA 319
Query: 181 PLKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
P T +F L D+R M GTGL+ F+K FP R FDVGIAEQHAVT
Sbjct: 320 P---SYTNVFADSLIAEAEADDRVVAITAAMPTGTGLDRFEKRFPERLFDVGIAEQHAVT 376
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLAAEG+KPF AIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+F
Sbjct: 377 FAAGLAAEGMKPFAAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSF 436
Query: 288 DTTFMACLPNMVVM 301
D ++ CLP V+M
Sbjct: 437 DLAYLGCLPGFVIM 450
>gi|349700981|ref|ZP_08902610.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
europaeus LMG 18494]
Length = 640
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 160/379 (42%), Positives = 203/379 (53%), Gaps = 90/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 70 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 119
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 120 PSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDNEMSIAPPVGAMSNY 179
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
L RL S+ +F L + A +K + + D ++R I G FE+LG YYIG
Sbjct: 180 LSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTG--GTLFEELGFYYIG 237
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------- 184
PVDGH++ L ++L+ ++ D G VL+HVITEK P +
Sbjct: 238 PVDGHDMNQLVHILRNLRDAEDVGPVLVHVITEKGHGYTPAESAGDKYHAVSKFNVVTGE 297
Query: 185 ---------QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T +F K L D+R M GTGL+ F K +P R FDVGIAE
Sbjct: 298 QKKGPSGPPSYTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPDRFFDVGIAE 357
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGL+PFCAIYS+FLQR +DQV HDV LQKLPVRFAIDRAGLVGADG T
Sbjct: 358 QHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGAT 417
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GAFD ++ CLP M +M
Sbjct: 418 HAGAFDIAYLGCLPGMTLM 436
>gi|349700050|ref|ZP_08901679.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
europaeus LMG 18494]
Length = 575
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 160/379 (42%), Positives = 203/379 (53%), Gaps = 90/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 103 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 152
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 153 PSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDNEMSIAPPVGAMSNY 212
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
L RL S+ +F L + A +K + + D ++R I G FE+LG YYIG
Sbjct: 213 LSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTG--GTLFEELGFYYIG 270
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------- 184
PVDGH++ L ++L+ ++ D G VL+HVITEK P +
Sbjct: 271 PVDGHDMNQLVHILRNLRDAEDVGPVLVHVITEKGHGYTPAESAGDKYHAVSKFNVVTGE 330
Query: 185 ---------QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T +F K L D+R M GTGL+ F K +P R FDVGIAE
Sbjct: 331 QKKGPSGPPSYTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPDRFFDVGIAE 390
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGL+PFCAIYS+FLQR +DQV HDV LQKLPVRFAIDRAGLVGADG T
Sbjct: 391 QHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGAT 450
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GAFD ++ CLP M +M
Sbjct: 451 HAGAFDIAYLGCLPGMTLM 469
>gi|427429236|ref|ZP_18919272.1| 1-deoxy-D-xylulose 5-phosphate synthase [Caenispirillum salinarum
AK4]
gi|425880916|gb|EKV29610.1| 1-deoxy-D-xylulose 5-phosphate synthase [Caenispirillum salinarum
AK4]
Length = 639
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 159/374 (42%), Positives = 199/374 (53%), Gaps = 89/374 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ G+ E+ +D FG GHSSTSISAGL GM V DL G +
Sbjct: 94 LRTVRQPGGISGFTLRSESEYDPFGAGHSSTSISAGL----------GMKVACDLAGDDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL-----------------------KRLHSNP 90
HVI VI +GA A M+YEA+NNAG ++ L K L S P
Sbjct: 144 HVICVIGDGAMSAGMAYEAMNNAGAMDAKLIVILNDNDMSIAPAVGAMSAYLSKVLSSKP 203
Query: 91 QF--RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGH 146
RQL +E + +F G ++ + E G + FE++G YY+GP+DGH
Sbjct: 204 WLSARQLAKEMAA------RFPGPINRAAKRAEEYARGMVTGGTLFEEMGFYYVGPIDGH 257
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
++ L VLK V+ G VLIH IT+K + P +
Sbjct: 258 KMDHLVPVLKNVRDSDPQGPVLIHCITQKGRGYAPAEAAADKYHGVSKFDVVTGTQAKAK 317
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T +F K L D++ M GGTGL+ F K FP R FDVGIAEQHAVT
Sbjct: 318 PNAPSYTSVFAKALVEEAREDDKVVAVTAAMPGGTGLDKFGKEFPERTFDVGIAEQHAVT 377
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPF AIYS+FLQR +DQV HDV +Q LPVRFAIDRAG VGADG TH G+F
Sbjct: 378 FAAGLASEGYKPFAAIYSTFLQRGYDQVVHDVAIQNLPVRFAIDRAGFVGADGATHQGSF 437
Query: 288 DTTFMACLPNMVVM 301
D ++ CLPNM +
Sbjct: 438 DLCYLCCLPNMTFL 451
>gi|170744395|ref|YP_001773050.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium sp. 4-46]
gi|168198669|gb|ACA20616.1| deoxyxylulose-5-phosphate synthase [Methylobacterium sp. 4-46]
Length = 654
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 161/377 (42%), Positives = 208/377 (55%), Gaps = 85/377 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL + A R +
Sbjct: 93 IRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSISAGLGMAVARDLAEAAARARGETPERR 152
Query: 54 HVISVIVEGATIARMSYEAINNAGVL----------------------NKALKRLHSNPQ 91
+V++VI +G+ A M+YEA+NNAG L + L RL S
Sbjct: 153 NVVAVIGDGSISAGMAYEAMNNAGALRSRLVVILNDNDMSIAPPVGAMSAYLARLVSGDT 212
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEI--------DAFSREIEAGSRACFFEDLGLYYIGPV 143
+R L +D ++FG + + + ++R I AG FE+LG +Y+GP+
Sbjct: 213 YRSL-------RDTARQFGRLLPKALYDTAVRAEEYARGILAGG-GTMFEELGFHYVGPI 264
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------QQ- 186
DGHNL+ L +LK V+ P+ G VL+HV+T+K K P + QQ
Sbjct: 265 DGHNLDHLLPILKNVRDAPE-GPVLVHVVTQKGKGYAPAEAAADRGHAVVKFDVVSGQQV 323
Query: 187 ---------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQH 224
TR+F + L D++ M GTG++LF K P R FDVGIAEQH
Sbjct: 324 KAKANAPTYTRVFGESLVKAADADDKVVAITAAMPSGTGVDLFAKAHPGRTFDVGIAEQH 383
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFAAGLAAEG +PFCAIYS+FLQR +DQV HDV LQ LPVRFA+DRAGLVGADG TH
Sbjct: 384 AVTFAAGLAAEGYRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFALDRAGLVGADGATHA 443
Query: 285 GAFDTTFMACLPNMVVM 301
GAFD ++ CLPNMVVM
Sbjct: 444 GAFDLAYLCCLPNMVVM 460
>gi|349700982|ref|ZP_08902611.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
europaeus LMG 18494]
Length = 578
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 160/379 (42%), Positives = 203/379 (53%), Gaps = 90/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 106 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 155
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 156 PSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDNEMSIAPPVGAMSNY 215
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
L RL S+ +F L + A +K + + D ++R I G FE+LG YYIG
Sbjct: 216 LSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTG--GTLFEELGFYYIG 273
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK------------------ 183
PVDGH++ L ++L+ ++ D G VL+HVITEK P +
Sbjct: 274 PVDGHDMNQLVHILRNLRDAEDVGPVLVHVITEKGHGYTPAESAGDKYHAVSKFNVVTGE 333
Query: 184 --------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T +F K L D+R M GTGL+ F K +P R FDVGIAE
Sbjct: 334 QKKGPSGPPSYTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPDRFFDVGIAE 393
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGL+PFCAIYS+FLQR +DQV HDV LQKLPVRFAIDRAGLVGADG T
Sbjct: 394 QHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGAT 453
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GAFD ++ CLP M +M
Sbjct: 454 HAGAFDIAYLGCLPGMTLM 472
>gi|349700302|ref|ZP_08901931.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
europaeus LMG 18494]
Length = 630
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 160/379 (42%), Positives = 203/379 (53%), Gaps = 90/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 70 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 119
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 120 PSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDNEMSIAPPVGAMSNY 179
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
L RL S+ +F L + A +K + + D ++R I G FE+LG YYIG
Sbjct: 180 LSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTG--GTLFEELGFYYIG 237
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------- 184
PVDGH++ L ++L+ ++ D G VL+HVITEK P +
Sbjct: 238 PVDGHDMNQLVHILRNLRDAEDVGPVLVHVITEKGHGYTPAESAGDKYHAVSKFNVVTGE 297
Query: 185 ---------QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T +F K L D+R M GTGL+ F K +P R FDVGIAE
Sbjct: 298 QKKGPSGPPSYTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPDRFFDVGIAE 357
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGL+PFCAIYS+FLQR +DQV HDV LQKLPVRFAIDRAGLVGADG T
Sbjct: 358 QHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGAT 417
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GAFD ++ CLP M +M
Sbjct: 418 HAGAFDIAYLGCLPGMTLM 436
>gi|386350703|ref|YP_006048951.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum F11]
gi|346719139|gb|AEO49154.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum F11]
Length = 622
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 161/373 (43%), Positives = 205/373 (54%), Gaps = 86/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMA+G L G
Sbjct: 71 IRTLRQGGGLSGFTLREESPYDPFGAGHSSTSISAGL----------GMAIGSALAGDAR 120
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
V++VI +G+ A M+YEA+NNAG ++ L RL S+
Sbjct: 121 DVVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDNDMSIAPPVGAMSAYLSRLLSSKS 180
Query: 92 F---RQLCQEAFSS-KDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
+ R L +E + D ++ + E ++R + G FE++G YY+GP+DGH
Sbjct: 181 WLSIRTLAKEIVARLPDALERTAKRAEE---YARGMVTGG-GTLFEEMGFYYVGPIDGHR 236
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-----------------LQQ---- 186
++ L VL+ V+ G VLIHV+T+K K P + +Q+
Sbjct: 237 MDHLVPVLRNVREAGRDGPVLIHVVTQKGKGYAPAENAPDKYHGVSRFNVVTGVQEKAKP 296
Query: 187 -----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T +F K L D+R M GGTGL+ +P RCFDVGIAEQHAVTF
Sbjct: 297 QAPSYTAVFGKQLVAAAAKDHRIVAVTAAMPGGTGLDKLAAAYPQRCFDVGIAEQHAVTF 356
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLA EGLKPF A+YSSFLQR +DQV HDV LQKLPVRFAIDRAG VGADG TH G FD
Sbjct: 357 AAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADGATHGGVFD 416
Query: 289 TTFMACLPNMVVM 301
F+ CLPN+VVM
Sbjct: 417 MAFLGCLPNLVVM 429
>gi|381165922|ref|ZP_09875141.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
[Phaeospirillum molischianum DSM 120]
gi|380684906|emb|CCG39953.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
[Phaeospirillum molischianum DSM 120]
Length = 641
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 161/356 (45%), Positives = 196/356 (55%), Gaps = 79/356 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D FG GHSSTSISA L GMAVGRDL G ++I+VI +GA A +Y
Sbjct: 115 ESEYDPFGAGHSSTSISAAL----------GMAVGRDLQGTQKNIIAVIGDGAMSAGQAY 164
Query: 71 EAINNAG--------VLNKA--------------LKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNAG VLN L RL S+P++ + A KD Q
Sbjct: 165 EAMNNAGAQGSRLVVVLNDNDMSIAHPVGAMSAYLSRLMSSPKYHSIRHLA---KDLVQL 221
Query: 109 FGGQMHEI----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDP 164
+ + ++R + G FE+LG +YIGPVDGHN E L VLK V+
Sbjct: 222 LPPPLERAAKRAEEYARGMVTGG-GTLFEELGFFYIGPVDGHNFEHLLPVLKNVRDSDSN 280
Query: 165 GAVLIHVITEKEKAMLPLKL--------------------------QQTRLFCKIL---- 194
VL+HV+T+K K P + T +F K L
Sbjct: 281 TPVLLHVVTKKGKGYAPAEAAADKYHGVGRFDVVTGQFEKPVANAPSYTSVFAKALLAEA 340
Query: 195 --DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS 245
D+R M GGTGL+ F FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYS
Sbjct: 341 EADDRVVAITAAMPGGTGLDRFSSRFPGRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYS 400
Query: 246 SFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
+FLQR +DQ+ HDV LQKLPVRFAIDRAGLVGADG TH GA+D + C P++V+M
Sbjct: 401 TFLQRAYDQLQHDVVLQKLPVRFAIDRAGLVGADGATHAGAYDLALLGCQPDIVIM 456
>gi|83593951|ref|YP_427703.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC
11170]
gi|118595487|sp|Q2RR29.1|DXS2_RHORT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
synthase 2; Short=DXPS 2
gi|83576865|gb|ABC23416.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC
11170]
Length = 645
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 161/373 (43%), Positives = 205/373 (54%), Gaps = 86/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMA+G L G
Sbjct: 94 IRTLRQGGGLSGFTLREESPYDPFGAGHSSTSISAGL----------GMAIGSALAGDAR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
V++VI +G+ A M+YEA+NNAG ++ L RL S+
Sbjct: 144 DVVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDNDMSIAPPVGAMSAYLSRLLSSKS 203
Query: 92 F---RQLCQEAFSS-KDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
+ R L +E + D ++ + E ++R + G FE++G YY+GP+DGH
Sbjct: 204 WLSIRTLAKEIVARLPDALERTAKRAEE---YARGMVTGG-GTLFEEMGFYYVGPIDGHR 259
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-----------------LQQ---- 186
++ L VL+ V+ G VLIHV+T+K K P + +Q+
Sbjct: 260 MDHLVPVLRNVREAGRDGPVLIHVVTQKGKGYAPAENAPDKYHGVSRFNVVTGVQEKAKP 319
Query: 187 -----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T +F K L D+R M GGTGL+ +P RCFDVGIAEQHAVTF
Sbjct: 320 QAPSYTAVFGKQLVAAAAKDHRIVAVTAAMPGGTGLDKLAAAYPQRCFDVGIAEQHAVTF 379
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLA EGLKPF A+YSSFLQR +DQV HDV LQKLPVRFAIDRAG VGADG TH G FD
Sbjct: 380 AAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADGATHGGVFD 439
Query: 289 TTFMACLPNMVVM 301
F+ CLPN+VVM
Sbjct: 440 MAFLGCLPNLVVM 452
>gi|413945325|gb|AFW77974.1| hypothetical protein ZEAMMB73_720473 [Zea mays]
Length = 442
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 137/243 (56%), Positives = 161/243 (66%), Gaps = 43/243 (17%)
Query: 102 SKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQ 157
S+ ++ GG +HE +D ++R + +G + FE+LGLYYIGPVDGHN++DL +L
Sbjct: 5 SQGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDLITILND 64
Query: 158 VKAIPDPGAVLIHVITEK-------EKAM------------------LPLK-LQQTRLFC 191
VK+ G VLIHV+TEK E+A P K L T F
Sbjct: 65 VKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFA 124
Query: 192 KIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLK 238
+ L D++ MGGGTGLN F + FP RCFDVGIAEQHAVTFAAGLA EGLK
Sbjct: 125 EALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGLACEGLK 184
Query: 239 PFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNM 298
PFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGADGPTHCGAFD +MACLPNM
Sbjct: 185 PFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNM 244
Query: 299 VVM 301
VVM
Sbjct: 245 VVM 247
>gi|163761048|ref|ZP_02168126.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hoeflea phototrophica
DFL-43]
gi|162281829|gb|EDQ32122.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hoeflea phototrophica
DFL-43]
Length = 643
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 207/368 (56%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAV L K
Sbjct: 94 IRTLRQENGLSGFTKRSESEYDDFGAGHSSTSISAGL----------GMAVASQLQNKPR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
HV+SVI +GA A M++EA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 HVVSVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARMASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R +E + FE+LG Y+IGP+DGHNL+ L
Sbjct: 204 YMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEELGFYHIGPIDGHNLDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ D G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRDNGD-GPVLIHVVTQKGKGYGPAEAAADKYHGVSKFDVITGTQAKAKPNAPSY 322
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + L D++ M GTG++ F K FP R FDVGIAEQHAVTFAAG+A
Sbjct: 323 TAVFGETLVQEGGYDDKIVAISAAMPSGTGVDKFAKVFPERTFDVGIAEQHAVTFAAGMA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
EGLKPFCAIYS+FLQR +DQV HDV +QKLPVRF IDRAG VGADG TH G+FDTT++A
Sbjct: 383 TEGLKPFCAIYSTFLQRGYDQVVHDVAIQKLPVRFPIDRAGFVGADGATHAGSFDTTYLA 442
Query: 294 CLPNMVVM 301
CLP VVM
Sbjct: 443 CLPGFVVM 450
>gi|365855944|ref|ZP_09395974.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Acetobacteraceae
bacterium AT-5844]
gi|363718654|gb|EHM01988.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Acetobacteraceae
bacterium AT-5844]
Length = 642
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 164/381 (43%), Positives = 206/381 (54%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLL---- 49
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDLL
Sbjct: 106 IRTLRQGGGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVARDLLRGTP 155
Query: 50 ----GKNN--HVISVIVEGATIARMSYEAINNAG--------VLNKA------------- 82
GK N +VI+VI +GA A M+YEA+NNAG VLN
Sbjct: 156 YSQGGKRNDQNVIAVIGDGAMSAGMAYEAMNNAGAMRSRLIVVLNDNDMSIAPPVGAMSA 215
Query: 83 -LKRLHSNPQFRQLCQEAFSSKDKK--QKFGGQMHEIDAFSREIEAGSRACFFEDLGLYY 139
L RL S+ F L +E + ++ D F+R + G FE+LG YY
Sbjct: 216 YLSRLISSRPFLSL-REVMAKVARRFPAPLERAARRADEFARGMLTGG--TLFEELGFYY 272
Query: 140 IGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------- 186
+GP+DGHN++ L +L+ ++ VL+HV+T+K K P +
Sbjct: 273 VGPIDGHNMDHLLPLLRNLRDAETGPPVLLHVVTQKGKGYAPAEAAPDKYHAVAKFNVVT 332
Query: 187 -------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGI 220
T++F L D R M GTGL+LFQK FP R FDVGI
Sbjct: 333 GTQTKAPPGPPTYTKVFANALIAEAERDERIVAVTAAMPSGTGLDLFQKRFPRRTFDVGI 392
Query: 221 AEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADG 280
AEQHAVTFAAG+A EG+KPF AIYS+FLQR +DQV HDV LQKLPVRFA+DRAGLVGADG
Sbjct: 393 AEQHAVTFAAGMATEGIKPFVAIYSTFLQRAYDQVVHDVALQKLPVRFALDRAGLVGADG 452
Query: 281 PTHCGAFDTTFMACLPNMVVM 301
TH GA+D ++ C+P MV+M
Sbjct: 453 ATHAGAYDIAYLGCIPQMVLM 473
>gi|393772959|ref|ZP_10361359.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. Rr
2-17]
gi|392721698|gb|EIZ79163.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. Rr
2-17]
Length = 640
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 163/373 (43%), Positives = 207/373 (55%), Gaps = 88/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G A+ L G
Sbjct: 94 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GFAIANKLQGTPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L RL S+ Q
Sbjct: 144 RGIAVIGDGAMSAGMAYEAMNNAAEAGNRLVVILNDNDMSIAPPVGGLSSYLARLVSSGQ 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMH----EIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
F L + A + +K +H + D F+R + G FE+LG YY+GP+DGH+
Sbjct: 204 FLGLREMA---RKFARKLPRPLHVAAKKTDEFARGMAMG--GTLFEELGFYYVGPIDGHD 258
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------LQQ------------- 186
LE L VL+ V+ + G +LIHV+T+K K +P + +Q+
Sbjct: 259 LEALVPVLENVRDAAE-GPILIHVVTQKGKGYVPAEEAADKYHGVQKFNVVTGEQAKSPA 317
Query: 187 -----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T +F K L D+R M GTGL+ F FP R FDVGIAEQHAVTF
Sbjct: 318 GPPSYTGVFAKALIAEAQRDDRICAITAAMPSGTGLDKFGDLFPGRSFDVGIAEQHAVTF 377
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLAA+G++PFCAIYS+FLQR FDQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 378 AAGLAAQGMRPFCAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFD 437
Query: 289 TTFMACLPNMVVM 301
T++A LPN+VVM
Sbjct: 438 VTYLATLPNLVVM 450
>gi|356518258|ref|XP_003527796.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Glycine max]
Length = 716
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 157/381 (41%), Positives = 206/381 (54%), Gaps = 94/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R+ GL E+ +DAFG GH SISAGL GMAV RD+ G+
Sbjct: 159 MTTMRRKNGLSGFTSRFESEYDAFGAGHGCNSISAGL----------GMAVARDIKGRQE 208
Query: 54 HVISVIVEGATIARMSYEAINNAG------------------------------VLNKAL 83
V++VI T+A +YEA++NAG L+ L
Sbjct: 209 RVVAVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIEEGPKTSVNALSSTL 268
Query: 84 KRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYY 139
+L S+ FR+ + A K ++ G MHE +D ++R + + FE+LGLYY
Sbjct: 269 SKLQSSKSFRRFREAA---KGVTKRIGRGMHELAAKVDEYARGMMGPLGSTLFEELGLYY 325
Query: 140 IGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAMLPLKLQQTRLFCK 192
IGPVDGHN+EDL VL++V ++ G VL+HVIT++ +K+ + + Q+ F K
Sbjct: 326 IGPVDGHNIEDLICVLQEVASLDSMGPVLVHVITDENQGDDNSQKSDMSDE-QKNEGFVK 384
Query: 193 --ILDNRMGGGT------------------------------GLNLFQKHFPIRCFDVGI 220
+LDN + T L LFQ+ FP R FDVG+
Sbjct: 385 SDLLDNPVWPQTYGNCFVATLVAEAEKDKDIIVVHAGLTMEPSLELFQEKFPDRFFDVGM 444
Query: 221 AEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADG 280
AEQHAVTFA+GLA GLKPFC I SSFLQR +DQV HDVD Q++PVRF I AGLVG+DG
Sbjct: 445 AEQHAVTFASGLACGGLKPFCVIPSSFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGSDG 504
Query: 281 PTHCGAFDTTFMACLPNMVVM 301
P CGAFD FM+CLPNM+VM
Sbjct: 505 PLRCGAFDINFMSCLPNMIVM 525
>gi|159046066|ref|YP_001534860.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dinoroseobacter shibae DFL
12]
gi|157913826|gb|ABV95259.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dinoroseobacter shibae DFL
12]
Length = 658
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 201/372 (54%), Gaps = 85/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+++D FG HSSTSISA L G A RDL G
Sbjct: 111 IRTLRQKGGLSGFTKRSESIYDPFGAAHSSTSISAAL----------GFATARDLGGPTG 160
Query: 54 HVISVIVEGATIARMSYEAINNAG----------------------VLNKALKRLHSNPQ 91
I+VI +G+ A M+YEA+NNAG ++ L L S+
Sbjct: 161 DAIAVIGDGSISAGMAYEAMNNAGSEKRRLFVILNDNEMSIAPPTGAMSTYLSDLASSGP 220
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREI---EAGSRACFFEDLGLYYIGPVDGHNL 148
L + A + ++ G + E +R + E GS A FE+LG YIGP+DGH++
Sbjct: 221 LYALKELA---EGVERSLPGPLREGAQRARNLVTGEHGSSATLFEELGFDYIGPIDGHDI 277
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL-----------------QQ----- 186
L VL+ +A G VLIH T K K P +L QQ
Sbjct: 278 PQLLQVLRAARAKAS-GPVLIHACTVKGKGYSPAELSDDCYHGVAKFDVATGKQQKSAPN 336
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T++F L D+R M GGTG+N+ K FP R FDVGIAEQHAVTFA
Sbjct: 337 APAYTKVFGATLTAEAERDSRICAVTAAMPGGTGVNIMGKRFPGRVFDVGIAEQHAVTFA 396
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA G+KPFCAIYSSFLQR +DQV HDV LQKLPVRFAIDRAGLVGADGPTH GA+D
Sbjct: 397 AGLAAGGMKPFCAIYSSFLQRGYDQVVHDVALQKLPVRFAIDRAGLVGADGPTHAGAYDI 456
Query: 290 TFMACLPNMVVM 301
+++ LPNM VM
Sbjct: 457 AYLSNLPNMTVM 468
>gi|58038727|ref|YP_190691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter oxydans
621H]
gi|58001141|gb|AAW60035.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Gluconobacter oxydans
621H]
Length = 669
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 158/384 (41%), Positives = 205/384 (53%), Gaps = 100/384 (26%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 110 IRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 159
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 160 PSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLNDNEMSIAPPVGSMSDY 219
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH-EIDAFSREIEAGSRA-----CFFEDLG 136
L RL S+ QF FS +D K ++ +I+ ++ E +R FE+LG
Sbjct: 220 LSRLMSSRQF-------FSLRDLAGKVAKRLPGKIERTAKRAEEYARGMITGGTLFEELG 272
Query: 137 LYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------ 184
YY+GPV+GH++ L +L+ ++ D G +L+H+ITEK + P +
Sbjct: 273 FYYVGPVNGHDMSQLVPILRNLRDADDQGPILLHIITEKGRGYKPAEAAGDKYHAVSKFN 332
Query: 185 --------------QQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFD 217
T +F + L R M GTGLN F K +P R FD
Sbjct: 333 VVTGEQKKAPAGPPSYTSIFSRELMRRAKTDDKLITITAAMPSGTGLNAFAKAYPDRFFD 392
Query: 218 VGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVG 277
VGIAEQHAVTFAAG+A+EGL+PFCAIYS+FLQR +DQV HDV LQ LPVRFAIDRAGLVG
Sbjct: 393 VGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGLVG 452
Query: 278 ADGPTHCGAFDTTFMACLPNMVVM 301
ADG TH GAFD ++ CLPNMVVM
Sbjct: 453 ADGATHAGAFDLNYLCCLPNMVVM 476
>gi|148554381|ref|YP_001261963.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas wittichii
RW1]
gi|166201541|sp|A5V6A9.1|DXS_SPHWW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|148499571|gb|ABQ67825.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Sphingomonas wittichii
RW1]
Length = 639
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 162/371 (43%), Positives = 198/371 (53%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G AV L K
Sbjct: 94 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GFAVANKLANKEG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L ++ S+
Sbjct: 144 RAIAVIGDGAMSAGMAYEAMNNAKQAGNRLIVILNDNDMSIAPPVGALSAYLAKIVSSRP 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
F L F+ K QK +H+ S E G + FE+LG YY+GPVDGHNL+
Sbjct: 204 F--LSMRGFA-KRVAQKLPRPIHDFAKRSEEYARGMATGGTLFEELGFYYVGPVDGHNLD 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------------------- 184
L +L+ V+ D G +LIHV+T K K P +
Sbjct: 261 HLLPILENVRD-GDHGPILIHVVTNKGKGYAPAEAAADKYHGVQKFDVVSGVQAKAPPGP 319
Query: 185 -QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T +F L D+R M GTGL+ F K FP R FDVGIAEQHAVTFAA
Sbjct: 320 PSYTGVFADALVAEAKRDDRICAITAAMPSGTGLDKFGKAFPERSFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLAA+G +PFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD T
Sbjct: 380 GLAAQGYRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDIT 439
Query: 291 FMACLPNMVVM 301
++A LPNMVVM
Sbjct: 440 YLATLPNMVVM 450
>gi|300022017|ref|YP_003754628.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans
ATCC 51888]
gi|299523838|gb|ADJ22307.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans
ATCC 51888]
Length = 648
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/376 (41%), Positives = 202/376 (53%), Gaps = 93/376 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ D FG HSSTSISAGL GMAV RD+ G +
Sbjct: 98 IRTLRQPNGLSGFTKRTESEFDPFGAAHSSTSISAGL----------GMAVARDMSGGDT 147
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+V+ VI +GA A M+YEA+NNAG N+ L R S+
Sbjct: 148 NVVCVIGDGAMSAGMAYEALNNAGARNERLIVILNDNDMSIAPPTGALSSYLARTTSSAS 207
Query: 92 F-------RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVD 144
+ +QL Q S +++ ++ ++R + G A +FE+LG +Y+GP+D
Sbjct: 208 YFAVRDFAKQLAQRLPKSWERRAA------RVEEYTRSLWQGGGA-WFEELGFHYVGPID 260
Query: 145 GHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------ 186
GH+L L VLK V+ G +L+HV+T+K K P +
Sbjct: 261 GHDLGQLVPVLKNVRDAKQ-GPILVHVMTKKGKGYAPAEASPDKYHGVAKFNVVTGVQAK 319
Query: 187 --------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHA 225
TR+F L D + M GTGL++F + FP R FDVGIAEQHA
Sbjct: 320 PQAAAPSYTRVFADSLIAEAKKDPKIVAITAAMPDGTGLDVFGREFPDRTFDVGIAEQHA 379
Query: 226 VTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCG 285
VTFAAGLA EG+KPF AIYS+FLQR +DQV HDV +Q LPVRFAIDRAG VGADG TH G
Sbjct: 380 VTFAAGLATEGMKPFAAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGFVGADGATHAG 439
Query: 286 AFDTTFMACLPNMVVM 301
+FD ++ CLPN V+M
Sbjct: 440 SFDLAYLGCLPNFVIM 455
>gi|118595583|sp|Q5FUB1.2|DXS_GLUOX RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
Length = 660
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 158/384 (41%), Positives = 205/384 (53%), Gaps = 100/384 (26%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 101 IRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 150
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 151 PSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLNDNEMSIAPPVGSMSDY 210
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH-EIDAFSREIEAGSRA-----CFFEDLG 136
L RL S+ QF FS +D K ++ +I+ ++ E +R FE+LG
Sbjct: 211 LSRLMSSRQF-------FSLRDLAGKVAKRLPGKIERTAKRAEEYARGMITGGTLFEELG 263
Query: 137 LYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------ 184
YY+GPV+GH++ L +L+ ++ D G +L+H+ITEK + P +
Sbjct: 264 FYYVGPVNGHDMSQLVPILRNLRDADDQGPILLHIITEKGRGYKPAEAAGDKYHAVSKFN 323
Query: 185 --------------QQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFD 217
T +F + L R M GTGLN F K +P R FD
Sbjct: 324 VVTGEQKKAPAGPPSYTSIFSRELMRRAKTDDKLITITAAMPSGTGLNAFAKAYPDRFFD 383
Query: 218 VGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVG 277
VGIAEQHAVTFAAG+A+EGL+PFCAIYS+FLQR +DQV HDV LQ LPVRFAIDRAGLVG
Sbjct: 384 VGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGLVG 443
Query: 278 ADGPTHCGAFDTTFMACLPNMVVM 301
ADG TH GAFD ++ CLPNMVVM
Sbjct: 444 ADGATHAGAFDLNYLCCLPNMVVM 467
>gi|349686639|ref|ZP_08897781.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
oboediens 174Bp2]
Length = 654
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 203/379 (53%), Gaps = 90/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 94 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 143
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 144 PSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDNEMSIAPPVGAMSNY 203
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
L RL S+ +F L + A +K + + D ++R I G FE+LG YY+G
Sbjct: 204 LSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTG--GTLFEELGFYYVG 261
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------- 184
PVDGH++ L ++L+ ++ D G VL+HVITEK P +
Sbjct: 262 PVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYKPAESAGDKYHAVSKFNVVTGE 321
Query: 185 ---------QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T +F K L D+R M GTGL+ F + +P R FDVGIAE
Sbjct: 322 QKKGPSGPPSYTSVFAKELVRQASTDDRIVTITAAMPSGTGLDKFARAYPDRFFDVGIAE 381
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGL+PFCAIYS+FLQR +DQV HDV LQKLPVRFAIDRAGLVGADG T
Sbjct: 382 QHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGAT 441
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GAFD ++ CLP M +M
Sbjct: 442 HAGAFDIAYLGCLPGMTLM 460
>gi|402820429|ref|ZP_10869996.1| hypothetical protein IMCC14465_12300 [alpha proteobacterium
IMCC14465]
gi|402511172|gb|EJW21434.1| hypothetical protein IMCC14465_12300 [alpha proteobacterium
IMCC14465]
Length = 643
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 156/374 (41%), Positives = 203/374 (54%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL +N
Sbjct: 94 IRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSISAGL----------GMAVARDLKETDN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN----------------------KALKRLHSNPQ 91
+V++VI +GA A M+YEA+NNAG ++ L RL S
Sbjct: 144 NVVAVIGDGAMSAGMAYEAMNNAGAMDGRLIVILNDNDMSIAPPVGAMSAYLARLLSGSG 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R+L + K + I SR++E +R + FE++G YY+GP+DGH
Sbjct: 204 YRKLRKSLKGIASKMPR------SIKEASRKMEEYTRGFWTGGTLFEEIGFYYVGPIDGH 257
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-----------------LQQ--- 186
NL+ L VL+ V+ + G +L+HV+T+K P + LQ
Sbjct: 258 NLDHLLPVLQNVRDSVE-GPILVHVVTQKGHGYAPAEAAADKYHGVSKFDIVTGLQSKPS 316
Query: 187 ------TRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T +F L M GTGL+ F +P RCFDVGIAEQHAVT
Sbjct: 317 TNIPSYTSVFADSLIKEAETDKNIVAVTAAMPDGTGLDKFAHIYPDRCFDVGIAEQHAVT 376
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAG+A EGLKPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAGLVGADGPTH G+F
Sbjct: 377 FAAGMATEGLKPFVAIYSTFLQRGYDQIVHDVAIQKLPVRFAIDRAGLVGADGPTHAGSF 436
Query: 288 DTTFMACLPNMVVM 301
D ++ LP+ V+M
Sbjct: 437 DMAYLGALPDFVLM 450
>gi|302383898|ref|YP_003819721.1| deoxyxylulose-5-phosphate synthase [Brevundimonas subvibrioides
ATCC 15264]
gi|302194526|gb|ADL02098.1| deoxyxylulose-5-phosphate synthase [Brevundimonas subvibrioides
ATCC 15264]
Length = 638
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 196/368 (53%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG H+STSISA L G A RD GK N
Sbjct: 91 IRTLRMGGGLSGFTKRSESEYDPFGAAHASTSISAAL----------GFAAARDQQGKQN 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
V++VI +G+ A M+YEA+NNA L L+ N S+ KQ GG
Sbjct: 141 KVVAVIGDGSMSAGMAYEAMNNAAETTGQLTVILNDNDMSIAPPVGGMSAYLAKQVSGGA 200
Query: 113 MHEIDAFSREI---------EAGSRA-----------CFFEDLGLYYIGPVDGHNLEDLA 152
F RE+ EA +A FFE+LG YYIGPVDGH++++L
Sbjct: 201 YQNFRKFGREVVQHMPRPFREAARKAEEYARGMVVGGTFFEELGFYYIGPVDGHDMDNLV 260
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL----------------------F 190
+LK AI D V++HV+T+K K P + +L +
Sbjct: 261 PILKNAAAITDR-PVVVHVVTQKGKGYAPAESSADKLHAVVKFDVVSGKQSKSVSNAPSY 319
Query: 191 CKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
K+ M GTGL+LF + +P R +DVGIAEQHAVTFAAGLA
Sbjct: 320 TKVFGTELIKRAAIDPSIVAITAAMPSGTGLDLFGQAYPKRTYDVGIAEQHAVTFAAGLA 379
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A+G+KPFCAIYS+FLQR +DQV HDV +QKLPVRFA+DRAGLVGADG TH G+FD +M
Sbjct: 380 ADGMKPFCAIYSTFLQRGYDQVVHDVAIQKLPVRFAMDRAGLVGADGSTHAGSFDIGYMG 439
Query: 294 CLPNMVVM 301
LP MV+M
Sbjct: 440 ALPGMVLM 447
>gi|349687975|ref|ZP_08899117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
oboediens 174Bp2]
Length = 664
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 203/379 (53%), Gaps = 90/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 94 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 143
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 144 PSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDNEMSIAPPVGAMSNY 203
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
L RL S+ +F L + A +K + + D ++R I G FE+LG YY+G
Sbjct: 204 LSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTG--GTLFEELGFYYVG 261
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------- 184
PVDGH++ L ++L+ ++ D G VL+HVITEK P +
Sbjct: 262 PVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYKPAESAGDKYHAVSKFNVVTGE 321
Query: 185 ---------QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T +F K L D+R M GTGL+ F + +P R FDVGIAE
Sbjct: 322 QKKGPSGPPSYTSVFAKELVRQASTDDRIVTITAAMPSGTGLDKFARAYPDRFFDVGIAE 381
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGL+PFCAIYS+FLQR +DQV HDV LQKLPVRFAIDRAGLVGADG T
Sbjct: 382 QHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGAT 441
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GAFD ++ CLP M +M
Sbjct: 442 HAGAFDIAYLGCLPGMTLM 460
>gi|349686274|ref|ZP_08897416.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
oboediens 174Bp2]
Length = 631
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 203/379 (53%), Gaps = 90/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 103 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 152
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 153 PSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDNEMSIAPPVGAMSNY 212
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
L RL S+ +F L + A +K + + D ++R I G FE+LG YY+G
Sbjct: 213 LSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTG--GTLFEELGFYYVG 270
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------- 184
PVDGH++ L ++L+ ++ D G VL+HVITEK P +
Sbjct: 271 PVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYKPAESAGDKYHAVSKFNVVTGE 330
Query: 185 ---------QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T +F K L D+R M GTGL+ F + +P R FDVGIAE
Sbjct: 331 QKKGPSGPPSYTSVFAKELVRQASTDDRIVTITAAMPSGTGLDKFARAYPDRFFDVGIAE 390
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGL+PFCAIYS+FLQR +DQV HDV LQKLPVRFAIDRAGLVGADG T
Sbjct: 391 QHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGAT 450
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GAFD ++ CLP M +M
Sbjct: 451 HAGAFDIAYLGCLPGMTLM 469
>gi|349688169|ref|ZP_08899311.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
oboediens 174Bp2]
Length = 634
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 203/379 (53%), Gaps = 90/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 106 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 155
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 156 PSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDNEMSIAPPVGAMSNY 215
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
L RL S+ +F L + A +K + + D ++R I G FE+LG YY+G
Sbjct: 216 LSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTG--GTLFEELGFYYVG 273
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------- 184
PVDGH++ L ++L+ ++ D G VL+HVITEK P +
Sbjct: 274 PVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYKPAESAGDKYHAVSKFNVVTGE 333
Query: 185 ---------QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T +F K L D+R M GTGL+ F + +P R FDVGIAE
Sbjct: 334 QKKGPSGPPSYTSVFAKELVRQASTDDRIVTITAAMPSGTGLDKFARAYPDRFFDVGIAE 393
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGL+PFCAIYS+FLQR +DQV HDV LQKLPVRFAIDRAGLVGADG T
Sbjct: 394 QHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGAT 453
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GAFD ++ CLP M +M
Sbjct: 454 HAGAFDIAYLGCLPGMTLM 472
>gi|356509936|ref|XP_003523698.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Glycine max]
Length = 716
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 154/380 (40%), Positives = 202/380 (53%), Gaps = 92/380 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R+ GL E+ +DAFG GH +SISAGL GMAV RD+ G+
Sbjct: 159 MTTMRRKNGLSGVTSRFESEYDAFGAGHGCSSISAGL----------GMAVARDIKGRRE 208
Query: 54 HVISVIVEGATIARMSYEAINNAG------------------------------VLNKAL 83
VI+VI T+A +YEA++NAG L+ L
Sbjct: 209 RVIAVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIEEGPKTFVNALSSTL 268
Query: 84 KRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYY 139
+L S+ FR+ + A K ++ G MHE +D ++R + + FE+LGLYY
Sbjct: 269 SKLQSSKSFRRFREAA---KGVTKRIGRGMHELAAKVDEYARGMMGPLGSTLFEELGLYY 325
Query: 140 IGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKA--------MLPLKLQQTRLFC 191
IGPVDGHN+EDL VL++V ++ G VL+HVIT++ + + + + +
Sbjct: 326 IGPVDGHNIEDLICVLQEVASLDSMGPVLVHVITDENQGDENSQKSDISDGQQDEGSVKS 385
Query: 192 KILDNRMGGGT------------------------------GLNLFQKHFPIRCFDVGIA 221
LDN + T L LFQ+ FP R FDVG+A
Sbjct: 386 DSLDNPVRPQTYGNCFVETLVVEAEKDKDIVVVHAGLTMEPSLELFQEKFPDRFFDVGMA 445
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTFA+GLA GLKPFC I SSFLQR +DQV HDVD Q++PVRF I AGLVG+DGP
Sbjct: 446 EQHAVTFASGLACGGLKPFCVIASSFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGSDGP 505
Query: 282 THCGAFDTTFMACLPNMVVM 301
CGAFD FM+CLPNM+VM
Sbjct: 506 LQCGAFDINFMSCLPNMIVM 525
>gi|114569400|ref|YP_756080.1| 1-deoxy-D-xylulose-5-phosphate synthase [Maricaulis maris MCS10]
gi|122316501|sp|Q0ARE5.1|DXS_MARMM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|114339862|gb|ABI65142.1| 1-deoxy-D-xylulose-5-phosphate synthase [Maricaulis maris MCS10]
Length = 643
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 157/366 (42%), Positives = 206/366 (56%), Gaps = 76/366 (20%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG H+STSISA L G AVGRDL +N
Sbjct: 94 IRTLRQPGGLSGFTKRSESEYDPFGAAHASTSISAAL----------GFAVGRDLKDENR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
+VI+VI +G+ A M+YEA+NNAG + L + ++ R + +
Sbjct: 144 NVIAVIGDGSMSAGMAYEAMNNAGHIGGRLIVILNDNDMSIAPPVGAMSHYFARLVSSQR 203
Query: 100 FSSKDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAYV 154
+ S K K + ++ +R E R FE++G Y+GP+DGH+L+ L V
Sbjct: 204 YRSIRKLGKGVAKALRVEEAARRAEEYMRGMAMGGTLFEEMGFRYVGPIDGHDLDQLVPV 263
Query: 155 LKQVKAIPDPGAVLIHVITEKEKAMLPLKL-----------------QQ---------TR 188
L+ V+ D G VLIHV+T+K K P + QQ T+
Sbjct: 264 LRNVRD-GDNGPVLIHVVTQKGKGYAPAEASDDKYHGVAKFNVITGEQQKSKAAAPSYTK 322
Query: 189 LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAE 235
+F + L D+R M GGTGL+LF + FP R FDVGIAEQHAVTFAAGLAA+
Sbjct: 323 VFAQQLIREAEADSRVVGVTAAMPGGTGLDLFGERFPDRMFDVGIAEQHAVTFAAGLAAD 382
Query: 236 GLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACL 295
G+KPF AIYS+FLQR +DQV HDV +QKLPVRFAIDRAGLVGADG TH G+FD ++ L
Sbjct: 383 GMKPFAAIYSTFLQRGYDQVVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDIGYLGAL 442
Query: 296 PNMVVM 301
P MV+M
Sbjct: 443 PGMVLM 448
>gi|347759880|ref|YP_004867441.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter xylinus
NBRC 3288]
gi|347578850|dbj|BAK83071.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter xylinus
NBRC 3288]
Length = 663
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 203/379 (53%), Gaps = 90/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 103 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 152
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 153 PAYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDNEMSIAPPVGAMSNY 212
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
L RL S+ +F L + A +K + + D ++R I G FE+LG YY+G
Sbjct: 213 LSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTG--GTLFEELGFYYVG 270
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------- 184
PVDGH++ L ++L+ ++ D G VL+HVITEK P +
Sbjct: 271 PVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYTPAESAGDKYHAVSKFNVVTGE 330
Query: 185 ---------QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T +F K L D+R M GTGL+ F K +P R FDVGIAE
Sbjct: 331 QKKGPSGPPSYTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPDRFFDVGIAE 390
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGL+PFCAIYSSFLQR +DQV HDV LQKLPVRFAIDRAGLVGADG T
Sbjct: 391 QHAVTFAAGMATEGLRPFCAIYSSFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGAT 450
Query: 283 HCGAFDTTFMACLPNMVVM 301
H G+FD ++ CLP + +M
Sbjct: 451 HAGSFDIAYLGCLPGITLM 469
>gi|347760612|ref|YP_004868173.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter xylinus
NBRC 3288]
gi|347579582|dbj|BAK83803.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter xylinus
NBRC 3288]
Length = 671
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 203/379 (53%), Gaps = 90/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 101 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 150
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 151 PAYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDNEMSIAPPVGAMSNY 210
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
L RL S+ +F L + A +K + + D ++R I G FE+LG YY+G
Sbjct: 211 LSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTG--GTLFEELGFYYVG 268
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------- 184
PVDGH++ L ++L+ ++ D G VL+HVITEK P +
Sbjct: 269 PVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYTPAESAGDKYHAVSKFNVVTGE 328
Query: 185 ---------QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T +F K L D+R M GTGL+ F K +P R FDVGIAE
Sbjct: 329 QKKGPSGPPSYTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPDRFFDVGIAE 388
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGL+PFCAIYSSFLQR +DQV HDV LQKLPVRFAIDRAGLVGADG T
Sbjct: 389 QHAVTFAAGMATEGLRPFCAIYSSFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGAT 448
Query: 283 HCGAFDTTFMACLPNMVVM 301
H G+FD ++ CLP + +M
Sbjct: 449 HAGSFDIAYLGCLPGITLM 467
>gi|398383548|ref|ZP_10541616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium sp. AP49]
gi|397724564|gb|EJK85029.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium sp. AP49]
Length = 640
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 163/373 (43%), Positives = 202/373 (54%), Gaps = 88/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G AV + GK
Sbjct: 93 IRTLRQGGGLSGFTKRTESEYDPFGAAHSSTSISAAL----------GFAVANKMQGKPG 142
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L RL S+ +
Sbjct: 143 KAIAVIGDGAMSAGMAYEAMNNAQEAGNRLVVILNDNDMSIAPPVGGLSAYLARLVSSRE 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
F L A K +K +H+ D F+R + G FE+LG YY+GPVDGHN
Sbjct: 203 FLGLRDLA---KRLARKLPRPLHKAAKKTDEFARGMAMG--GTLFEELGFYYVGPVDGHN 257
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------------- 184
L+ L VL+ V+ + G VLIHV+T+K K P +
Sbjct: 258 LDQLIPVLENVRDNAE-GPVLIHVVTQKGKGYAPAEAAADKYHGVQKFDVITGTQAKAPP 316
Query: 185 ---QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T +F + L D R M GTGL+ F+ FP R FDVGIAEQHAVTF
Sbjct: 317 GPPSYTNVFAQALIAEAQRDPRLCAITAAMPSGTGLDKFELAFPDRTFDVGIAEQHAVTF 376
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLAA+G++PFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 377 AAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFD 436
Query: 289 TTFMACLPNMVVM 301
T++A LPN VVM
Sbjct: 437 VTYLASLPNFVVM 449
>gi|330994689|ref|ZP_08318612.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter sp.
SXCC-1]
gi|329758330|gb|EGG74851.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter sp.
SXCC-1]
Length = 663
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 203/379 (53%), Gaps = 90/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 103 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 152
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 153 PSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDNEMSIAPPVGAMSSY 212
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
L RL S+ +F L + A +K + + D ++R I G FE+LG YY+G
Sbjct: 213 LSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTG--GTLFEELGFYYVG 270
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------- 184
PVDGH++ L ++L+ ++ D G VL+HVITEK P +
Sbjct: 271 PVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYKPAESAGDKYHAVSKFNVVTGE 330
Query: 185 ---------QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T +F K L D+R M GTGL+ F K +P R FDVGIAE
Sbjct: 331 QKKGPSGPPSYTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPDRFFDVGIAE 390
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGL+PFCAIYSSFLQR +DQV HDV LQKLPVRFAIDRAGLVGADG T
Sbjct: 391 QHAVTFAAGMATEGLRPFCAIYSSFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGAT 450
Query: 283 HCGAFDTTFMACLPNMVVM 301
H G+FD ++ CLP + +M
Sbjct: 451 HAGSFDIAYLGCLPGITLM 469
>gi|374341518|gb|AEZ35187.1| 1-deoxy-D-xylulose 5-phosphate synthase-III [Botryococcus braunii]
Length = 730
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 161/381 (42%), Positives = 203/381 (53%), Gaps = 91/381 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ+ GL E+ +DAFG GHSSTSISA VGMA+G D+ G N
Sbjct: 162 MNTIRQSGGLSGFTNRSESDYDAFGAGHSSTSISAA----------VGMAIGLDIKGMRN 211
Query: 54 HVISVIVEGATIARMSYEAINNAG--------------------------------VLNK 81
H I+VI +GA M+YEA+N+AG L+
Sbjct: 212 HSIAVIGDGAITGGMAYEAMNHAGFENVKNLIIILNDNQQVSLPTHYNGQQQSPVGALSA 271
Query: 82 ALKRLHSNPQFRQLCQ--EAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYY 139
L +L +N +L + +AF+ K ++D ++R + +G + FE+LG +Y
Sbjct: 272 TLAKLQTNKGLLELRERVKAFT-KTLPAPLQDATAKMDEYARGMISGVASTLFEELGCFY 330
Query: 140 IGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PLK 183
+GP+DGH++ L +L+ +K P G VL+HV T+K + P
Sbjct: 331 VGPIDGHDVSQLVDILRDLKETPVQGPVLLHVRTQKGQGYKFAEEASDRMHGVGKYDPET 390
Query: 184 LQQ----------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGI 220
+Q T F L D+R MGGGTG+N F K F R +DVGI
Sbjct: 391 GEQFKGAEKTPSYTHFFADALIAEAELDSRVQGIHAAMGGGTGMNRFAKRFQSRTYDVGI 450
Query: 221 AEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADG 280
AEQHAVTFAAGLA EGL P AIYSSFLQR +DQV HDV LQ LPVRFA+DRAGLVGADG
Sbjct: 451 AEQHAVTFAAGLACEGLVPVVAIYSSFLQRGYDQVIHDVALQSLPVRFAMDRAGLVGADG 510
Query: 281 PTHCGAFDTTFMACLPNMVVM 301
TH G D TFM CLPNMVVM
Sbjct: 511 ATHSGFADVTFMGCLPNMVVM 531
>gi|220926555|ref|YP_002501857.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium nodulans
ORS 2060]
gi|219951162|gb|ACL61554.1| deoxyxylulose-5-phosphate synthase [Methylobacterium nodulans ORS
2060]
Length = 665
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 159/377 (42%), Positives = 203/377 (53%), Gaps = 85/377 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL I A R
Sbjct: 93 IRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSISAGLGMAIARDLAEAAARARGETPARR 152
Query: 54 HVISVIVEGATIARMSYEAINNAGVL----------------------NKALKRLHSNPQ 91
+V++VI +G+ A M+YEA+NNAG L + L RL S
Sbjct: 153 NVVAVIGDGSISAGMAYEAMNNAGALRSRLIVILNDNDMSIAPPVGAMSAYLARLVSGDT 212
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEI--------DAFSREIEAGSRACFFEDLGLYYIGPV 143
+R L +D ++FG + + + ++R I AG FE+LG +Y+GP+
Sbjct: 213 YRSL-------RDTAKQFGRLLPKALYDTAARAEEYARGILAGG-GTMFEELGFHYVGPI 264
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP----------------LKLQQ- 186
DGHNL+ L VLK V+ P+ G VL+HV+T+K K P L QQ
Sbjct: 265 DGHNLDHLLPVLKNVRDAPE-GPVLVHVVTQKGKGYAPAEAAADRGHAVVKFDVLSGQQV 323
Query: 187 ---------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQH 224
TR+F + L M GTG+++F K P R FDVGIAEQH
Sbjct: 324 KAKPNAPSYTRVFGESLVKAAAADETVVAITAAMPSGTGVDIFAKAHPERTFDVGIAEQH 383
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFAAGLAAEG +PFCAIYS+FLQR +DQV HDV +Q LPVRFA+DRAGLVGADG TH
Sbjct: 384 AVTFAAGLAAEGFRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFALDRAGLVGADGATHA 443
Query: 285 GAFDTTFMACLPNMVVM 301
GAFD ++ CLPN+ VM
Sbjct: 444 GAFDLAYLCCLPNLTVM 460
>gi|395491697|ref|ZP_10423276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. PAMC
26617]
Length = 641
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 200/372 (53%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISA L G A+ + K
Sbjct: 94 IRTLRMGGGLSGFTKRSESEYDPFGAAHSSTSISASL----------GFAIANKIADKPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L R+ S+ +
Sbjct: 144 KAIAVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDNDMSIAPPVGGLSAYLSRIVSSRE 203
Query: 92 F---RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
F R+L + +K + F + + D F+R + G FE+LG YY+GP+DGHNL
Sbjct: 204 FLGFRELAKRL--AKKLPRPFASSLSKADEFARGLAMG--GTLFEELGFYYVGPIDGHNL 259
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP--------------------------- 181
E L VL+ V+ + G +L+HV+T+K K P
Sbjct: 260 EQLIPVLENVRDAEE-GPILVHVVTKKGKGYAPAEAAADKYHGVQKFDVISGVQTKAPPG 318
Query: 182 ------------LKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
LK ++ + M GTGL+ F K FP R FDVGIAEQHAVTFA
Sbjct: 319 PPQYQNVFGAQLLKEAESDPTICAITAAMPSGTGLDGFSKAFPDRFFDVGIAEQHAVTFA 378
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA+G++PFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 379 AGLAAQGMRPFCAIYSTFLQRAYDQVVHDVCIQNLPVRFAIDRAGLVGADGATHAGSFDV 438
Query: 290 TFMACLPNMVVM 301
T++A LPNMVVM
Sbjct: 439 TYLATLPNMVVM 450
>gi|404254956|ref|ZP_10958924.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. PAMC
26621]
Length = 641
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 200/372 (53%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISA L G A+ + K
Sbjct: 94 IRTLRMGGGLSGFTKRSESEYDPFGAAHSSTSISASL----------GFAIANKIADKPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L R+ S+ +
Sbjct: 144 KAIAVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDNDMSIAPPVGGLSAYLSRIVSSRE 203
Query: 92 F---RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
F R+L + +K + F + + D F+R + G FE+LG YY+GP+DGHNL
Sbjct: 204 FLGFRELAKRL--AKKLPRPFASSLSKADEFARGLAMG--GTLFEELGFYYVGPIDGHNL 259
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP--------------------------- 181
E L VL+ V+ + G +L+HV+T+K K P
Sbjct: 260 EQLIPVLENVRDAEE-GPILVHVVTKKGKGYAPAEAAADKYHGVQKFDVISGVQTKAPPG 318
Query: 182 ------------LKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
LK ++ + M GTGL+ F K FP R FDVGIAEQHAVTFA
Sbjct: 319 PPQYQNVFGAQLLKEAESDPTICAITAAMPSGTGLDGFSKAFPDRFFDVGIAEQHAVTFA 378
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA+G++PFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 379 AGLAAQGMRPFCAIYSTFLQRAYDQVVHDVCIQNLPVRFAIDRAGLVGADGATHAGSFDV 438
Query: 290 TFMACLPNMVVM 301
T++A LPNMVVM
Sbjct: 439 TYLATLPNMVVM 450
>gi|220926882|ref|YP_002502184.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium nodulans
ORS 2060]
gi|219951489|gb|ACL61881.1| deoxyxylulose-5-phosphate synthase [Methylobacterium nodulans ORS
2060]
Length = 654
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 159/377 (42%), Positives = 203/377 (53%), Gaps = 85/377 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL I A R
Sbjct: 93 IRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSISAGLGMAIARDLAEAAARARGETPARR 152
Query: 54 HVISVIVEGATIARMSYEAINNAGVL----------------------NKALKRLHSNPQ 91
+V++VI +G+ A M+YEA+NNAG L + L RL S
Sbjct: 153 NVVAVIGDGSISAGMAYEAMNNAGALRSRLIVILNDNDMSIAPPVGAMSAYLARLVSGDT 212
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEI--------DAFSREIEAGSRACFFEDLGLYYIGPV 143
+R L +D ++FG + + + ++R I AG FE+LG +Y+GP+
Sbjct: 213 YRSL-------RDTAKQFGRLLPKALYDTAARAEEYARGILAGG-GTMFEELGFHYVGPI 264
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP----------------LKLQQ- 186
DGHNL+ L VLK V+ P+ G VL+HV+T+K K P L QQ
Sbjct: 265 DGHNLDHLLPVLKNVRDAPE-GPVLVHVVTQKGKGYAPAEAAADRGHAVVKFDVLSGQQV 323
Query: 187 ---------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQH 224
TR+F + L M GTG+++F K P R FDVGIAEQH
Sbjct: 324 KAKPNAPSYTRVFGESLVKAAAADETVVAITAAMPSGTGVDIFAKAHPERTFDVGIAEQH 383
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFAAGLAAEG +PFCAIYS+FLQR +DQV HDV +Q LPVRFA+DRAGLVGADG TH
Sbjct: 384 AVTFAAGLAAEGFRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFALDRAGLVGADGATHA 443
Query: 285 GAFDTTFMACLPNMVVM 301
GAFD ++ CLPN+ VM
Sbjct: 444 GAFDLAYLCCLPNLTVM 460
>gi|14334452|gb|AAK59424.1| putative DEF (CLA1) protein [Arabidopsis thaliana]
Length = 406
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 147/216 (68%), Gaps = 39/216 (18%)
Query: 125 AGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML---- 180
+G+ + FE+LGLYYIGPVDGHN++DL +LK+VK+ G VLIHV+TEK +
Sbjct: 3 SGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAER 62
Query: 181 ------------PLKLQQ----------TRLFCKIL-------------DNRMGGGTGLN 205
P +Q T F + L MGGGTGLN
Sbjct: 63 ADDKYHGVVKFDPATGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLN 122
Query: 206 LFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLP 265
LFQ+ FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLP
Sbjct: 123 LFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 182
Query: 266 VRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
VRFA+DRAGLVGADGPTHCGAFD TFMACLPNM+VM
Sbjct: 183 VRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVM 218
>gi|402825295|ref|ZP_10874597.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. LH128]
gi|402261169|gb|EJU11230.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. LH128]
Length = 640
Score = 249 bits (637), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 160/373 (42%), Positives = 205/373 (54%), Gaps = 88/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G A+G + G+
Sbjct: 94 IRTLRQGGGLSGFTKRSESEYDPFGTAHSSTSISAAL----------GFAMGSKIKGQPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L RL S+ Q
Sbjct: 144 RGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDNDMSIAPPVGGLSAYLARLVSSGQ 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMH----EIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
F L + A + +K +H + D F+R + G FE+LG YY+GP+DGH+
Sbjct: 204 FLGLRELA---RKFARKLPRPLHLAAKKTDEFARGMAMG--GTLFEELGFYYVGPIDGHD 258
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------LQQ------------- 186
L+ L VL+ V+ + G +L+HV+T+K K P + +Q+
Sbjct: 259 LDALVPVLENVRDAGE-GPILVHVVTQKGKGYGPAESAADKYHGVQKFDVVTGEQAKAPA 317
Query: 187 -----TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T F K L M GTGL+ F + FP R FDVGIAEQHAVTF
Sbjct: 318 GPPSYTGTFAKALVAEAEKDATICAITAAMPSGTGLDKFAQMFPERSFDVGIAEQHAVTF 377
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLAA+G++PFCAIYS+FLQR FDQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 378 AAGLAAQGMRPFCAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFD 437
Query: 289 TTFMACLPNMVVM 301
T++A LPNMVVM
Sbjct: 438 VTYLATLPNMVVM 450
>gi|330991812|ref|ZP_08315761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter sp.
SXCC-1]
gi|329760833|gb|EGG77328.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter sp.
SXCC-1]
Length = 652
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/379 (41%), Positives = 203/379 (53%), Gaps = 90/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 82 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 131
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 132 PSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDNEMSIAPPVGAMSSY 191
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
L RL S+ +F L + A +K + + D ++R I G FE+LG YY+G
Sbjct: 192 LSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTG--GTLFEELGFYYVG 249
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------- 184
PVDGH++ L ++L+ ++ D G VL+HVITEK P +
Sbjct: 250 PVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYKPAESAGDKYHAVSKFNVVTGE 309
Query: 185 ---------QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T +F K L D++ M GTGL+ F K +P R FDVGIAE
Sbjct: 310 QKKGPSGPPSYTSVFAKELVRQAATDDKIVTITAAMPSGTGLDKFAKAYPDRFFDVGIAE 369
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGL+PFCAIYSSFLQR +DQV HDV LQKLPVRFAIDRAGLVGADG T
Sbjct: 370 QHAVTFAAGMATEGLRPFCAIYSSFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGAT 429
Query: 283 HCGAFDTTFMACLPNMVVM 301
H G+FD ++ CLP + +M
Sbjct: 430 HAGSFDIAYLGCLPGITLM 448
>gi|399060904|ref|ZP_10745823.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. AP12]
gi|398036847|gb|EJL30055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. AP12]
Length = 640
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 158/373 (42%), Positives = 203/373 (54%), Gaps = 88/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G A+ + G
Sbjct: 94 IRTLRQGGGLSGFTKRSESEYDPFGTAHSSTSISAAL----------GFAIANKIKGTPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L RL S+ Q
Sbjct: 144 RGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDNDMSIAPPVGGLSAYLARLVSSGQ 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMH----EIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
F L + A + ++ +H + D F+R + G FE+LG YY+GP+DGH+
Sbjct: 204 FLGLRELA---RKFARRLPRPLHVAAKKTDEFARGMAMGG--TLFEELGFYYVGPIDGHD 258
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------LQQ------------- 186
L+ L VL+ V+ + G +L+HV+T+K K P + +Q+
Sbjct: 259 LDALVPVLENVRDAGE-GPILVHVVTQKGKGYAPAENAADKYHGVQKFDVITGEQAKAPA 317
Query: 187 -----TRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T +F K L M GTGL+ F FP R FDVGIAEQHAVTF
Sbjct: 318 GPPSYTGVFAKALTAEAERDPTICAITAAMPSGTGLDKFSAQFPERSFDVGIAEQHAVTF 377
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLAA+G++PFCAIYS+FLQR FDQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 378 AAGLAAQGMRPFCAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFD 437
Query: 289 TTFMACLPNMVVM 301
T++A LPNMVVM
Sbjct: 438 VTYLATLPNMVVM 450
>gi|304393478|ref|ZP_07375406.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ahrensia sp. R2A130]
gi|303294485|gb|EFL88857.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ahrensia sp. R2A130]
Length = 637
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/370 (40%), Positives = 199/370 (53%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMA L G +
Sbjct: 92 IRTLRTETGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAEASKLAGVHR 141
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKA--------------LKRLHSNPQ 91
+V+SVI +G+ A M+YEA+NNAG +LN L RL S
Sbjct: 142 NVVSVIGDGSITAGMAYEAMNNAGGIDARQIVILNDNDMSIAPPTGAMSHYLARLVSGKT 201
Query: 92 FRQLCQEAFSSKDKKQKF-GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + A +K KF + + + ++R + + FE+LG YY+GP+DGH+L
Sbjct: 202 YRSLRETAKQLNEKLPKFIADKARKAEEYTRNV-FNEQGTMFEELGFYYVGPIDGHDLSV 260
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL--------------------- 189
L VL+ V+ G +L+HVITEK K P + +L
Sbjct: 261 LLPVLRNVRDAKS-GPILVHVITEKGKGYGPAEAAGDKLHAVAKFNVVTGEQSKSIPNAP 319
Query: 190 -FCKI-----------------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+ K+ + M GGTG+++F + FP R +DVGIAEQHAVTFAAG
Sbjct: 320 SYTKVFGQSLVQEAENDPKIVGISAAMPGGTGIDIFGEAFPERTYDVGIAEQHAVTFAAG 379
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+A+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAG VGADG TH G+FD +
Sbjct: 380 MASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGFVGADGATHAGSFDIAY 439
Query: 292 MACLPNMVVM 301
+ACLP VM
Sbjct: 440 LACLPGFTVM 449
>gi|296533687|ref|ZP_06896241.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseomonas cervicalis ATCC
49957]
gi|296265986|gb|EFH12057.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseomonas cervicalis ATCC
49957]
Length = 650
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 160/377 (42%), Positives = 202/377 (53%), Gaps = 88/377 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL----- 48
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL
Sbjct: 96 IRTLRQGGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVARDLKRAMP 145
Query: 49 --LGKNNHVISVIVEGATIARMSYEAINNAG--------VLNKA--------------LK 84
+ +VI+VI +GA A M+YEA+NNAG VLN L
Sbjct: 146 GEPRDDRNVIAVIGDGAMSAGMAYEAMNNAGAMRSRLIVVLNDNDMSIAPPVGAMSAYLS 205
Query: 85 RLHSNPQFRQLCQE-AFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPV 143
RL S+ F L + A ++ D ++R + G FE+LG YY+GP+
Sbjct: 206 RLISSRPFLSLREMMAKLARRFPAPLERAARRADEYARGLLTGG--TLFEELGFYYVGPI 263
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------------- 186
DGH+L+ L VL+ ++ D VL+HV+T+K K P +
Sbjct: 264 DGHSLDHLLPVLRNLRDAEDGAPVLLHVVTQKGKGYAPAEASADKYHAVAKFNVVTGTQA 323
Query: 187 ---------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQH 224
T++F + L D R M GTGL+ FQK FP R +DVGIAEQH
Sbjct: 324 KAPPGPPTYTKVFSQALIAEAEADPRIVAVTAAMPSGTGLDAFQKRFPKRTYDVGIAEQH 383
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFAAGLA EG+KPF AIYS+FLQR +DQV HDV LQ LPVRFA+DRAGLVGADG TH
Sbjct: 384 AVTFAAGLATEGIKPFVAIYSTFLQRAYDQVMHDVALQNLPVRFALDRAGLVGADGATHA 443
Query: 285 GAFDTTFMACLPNMVVM 301
GA+D ++ CLP MV+M
Sbjct: 444 GAYDIAYLGCLPQMVLM 460
>gi|399966672|gb|AFP65821.1| 1-deoxy-D-xylulose 5-phosphate synthase, partial [Eriobotrya
japonica]
Length = 483
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/256 (52%), Positives = 163/256 (63%), Gaps = 46/256 (17%)
Query: 89 NPQFRQLCQEAFSSKDKKQKFGGQMH----EIDAFSREIEAGSRACFFEDLGLYYIGPVD 144
N R+L + A K ++ GG +H ++D ++R + +G+ + FE+LGLYYIGPVD
Sbjct: 40 NRPLRELREVA---KGVTKQIGGSVHNLAAKVDEYARGMISGTGSSLFEELGLYYIGPVD 96
Query: 145 GHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKA---------MLPLKLQQTR 188
GHN++DL +LK+VK G VLI ++TEK EKA P +Q +
Sbjct: 97 GHNIDDLISILKEVKITKTTGPVLIRLVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFK 156
Query: 189 LFCKI-----------------------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHA 225
+ MGGGTG+NLF + FP RCFDVGIAEQHA
Sbjct: 157 ASASTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFLRRFPTRCFDVGIAEQHA 216
Query: 226 VTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCG 285
VTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGADGPTH G
Sbjct: 217 VTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHSG 276
Query: 286 AFDTTFMACLPNMVVM 301
+FD TFMACLPNMVVM
Sbjct: 277 SFDVTFMACLPNMVVM 292
>gi|410943439|ref|ZP_11375180.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter frateurii
NBRC 101659]
Length = 660
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/384 (40%), Positives = 203/384 (52%), Gaps = 100/384 (26%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 101 IRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAHHLHAEKD 150
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 151 PSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLNDNEMSIAPPVGSMSNY 210
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH-EIDAFSREIEAGSRA-----CFFEDLG 136
L RL S+ QF F +D K ++ +I+ ++ E +R FE+LG
Sbjct: 211 LSRLMSSRQF-------FGLRDLAGKVAKRLPGKIERTAKRAEEYARGMITGGTLFEELG 263
Query: 137 LYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------ 184
YY+GPVDGH++ L +L+ ++ D G +L+H+ITEK + P +
Sbjct: 264 FYYVGPVDGHDMSQLVPILRNLRDADDQGPILLHIITEKGRGYKPAEAAGDKYHAVSKFN 323
Query: 185 --------------QQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFD 217
T +F + L R M GTGL F K +P R FD
Sbjct: 324 VVTGEQKKAPAGPPSYTSVFSRELMRRAKTDDKLVTVTAAMPSGTGLTAFAKAYPDRFFD 383
Query: 218 VGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVG 277
VGIAEQHAVTFAAG+A+EGL+PFCAIYS+FLQR +DQV HDV LQ LPVRFAIDRAGLVG
Sbjct: 384 VGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGLVG 443
Query: 278 ADGPTHCGAFDTTFMACLPNMVVM 301
ADG TH G+FD ++ CLPNMVVM
Sbjct: 444 ADGATHAGSFDLNYLCCLPNMVVM 467
>gi|414343119|ref|YP_006984640.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter oxydans H24]
gi|411028454|gb|AFW01709.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter oxydans H24]
Length = 660
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/384 (40%), Positives = 203/384 (52%), Gaps = 100/384 (26%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 101 IRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 150
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 151 PSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLNDNEMSIAPPVGSMSNY 210
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH-EIDAFSREIEAGSRA-----CFFEDLG 136
L RL S+ QF F +D K ++ +I+ ++ E +R FE+LG
Sbjct: 211 LSRLMSSRQF-------FGLRDLAGKVAKRLPGKIERTAKRAEEYARGMITGGTLFEELG 263
Query: 137 LYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------ 184
YY+GPVDGH++ L +L+ ++ D G +L+H+ITEK + P +
Sbjct: 264 FYYVGPVDGHDMTQLVPILRNLRDADDQGPILLHIITEKGRGYKPAEAAGDKYHAVSKFN 323
Query: 185 --------------QQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFD 217
T +F + L R M GTGL F K +P R FD
Sbjct: 324 VVTGEQKKAPAGPPSYTSVFSRELLRRAKTDDKLITVTAAMPSGTGLTAFAKAYPDRFFD 383
Query: 218 VGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVG 277
VGIAEQHAVTFAAG+A+EGL+PFCAIYS+FLQR +DQV HDV LQ LPVRFAIDRAGLVG
Sbjct: 384 VGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGLVG 443
Query: 278 ADGPTHCGAFDTTFMACLPNMVVM 301
ADG TH G+FD ++ CLPNMVVM
Sbjct: 444 ADGATHAGSFDLNYLCCLPNMVVM 467
>gi|453330452|dbj|GAC87680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter thailandicus
NBRC 3255]
Length = 660
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/384 (40%), Positives = 203/384 (52%), Gaps = 100/384 (26%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 101 IRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 150
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 151 PSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLNDNEMSIAPPVGSMSNY 210
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH-EIDAFSREIEAGSRA-----CFFEDLG 136
L RL S+ QF F +D K ++ +I+ ++ E +R FE+LG
Sbjct: 211 LSRLMSSRQF-------FGLRDLAGKVAKRLPGKIERTAKRAEEYARGMITGGTLFEELG 263
Query: 137 LYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------ 184
YY+GPVDGH++ L +L+ ++ D G +L+H+ITEK + P +
Sbjct: 264 FYYVGPVDGHDMTQLVPILRNLRDADDQGPILLHIITEKGRGYKPAEAAGDKYHAVSKFN 323
Query: 185 --------------QQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFD 217
T +F + L R M GTGL F K +P R FD
Sbjct: 324 VVTGEQKKAPAGPPSYTSVFSRELLRRAKTDDKLITVTAAMPSGTGLTAFAKAYPDRFFD 383
Query: 218 VGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVG 277
VGIAEQHAVTFAAG+A+EGL+PFCAIYS+FLQR +DQV HDV LQ LPVRFAIDRAGLVG
Sbjct: 384 VGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGLVG 443
Query: 278 ADGPTHCGAFDTTFMACLPNMVVM 301
ADG TH G+FD ++ CLPNMVVM
Sbjct: 444 ADGATHAGSFDLNYLCCLPNMVVM 467
>gi|197104378|ref|YP_002129755.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phenylobacterium zucineum
HLK1]
gi|254782082|sp|B4RGW0.1|DXS_PHEZH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|196477798|gb|ACG77326.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phenylobacterium zucineum
HLK1]
Length = 638
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 199/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG H++TSISA L G RD G++N
Sbjct: 92 IRTLRQGGGLSGFTKRAESDYDPFGAAHAATSISAAL----------GFCAARDREGRDN 141
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
V++VI +G+ A M+YEA+NNA K L L+ N S+ + GG
Sbjct: 142 KVVAVIGDGSMSAGMAYEAMNNAYETTKQLTVILNDNDMSIAPPVGGMSAYMARLVSGGG 201
Query: 113 MHEID--------AFSREIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDLA 152
+ AF R ++ +R FFE+LG YY+GP+DGH+++ L
Sbjct: 202 YQSLRNLGKAVSRAFPRPLQEAARKAEEYARGMVTGGTFFEELGFYYVGPIDGHDMDALV 261
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------------------LQQ 186
+VL+ + I D VL+HV+T+K K P +
Sbjct: 262 HVLQNARKIDDK-PVLVHVVTQKGKGYAPAEKAADKYHGVVKFDVVTGAQAKSQAAAPSY 320
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D R M GTGL+LF + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 321 TKVFAQELVKHAERDERVVAITAAMPSGTGLDLFGQRFPERTFDVGIAEQHAVTFAAGLA 380
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A+G+KPF AIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADGPTH G+FD FM
Sbjct: 381 ADGMKPFAAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGPTHAGSFDVGFMG 440
Query: 294 CLPNMVVM 301
LP MVVM
Sbjct: 441 QLPGMVVM 448
>gi|383642490|ref|ZP_09954896.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas elodea ATCC
31461]
Length = 641
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 198/370 (53%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RTIRQ GL E+ D FG HSSTSISA L G A L G
Sbjct: 94 IRTIRQGGGLSGFTKRSESEFDPFGAAHSSTSISAAL----------GFATANKLKGAPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L RL S+ +
Sbjct: 144 KAIAVIGDGAMSAGMAYEAMNNAEAAGNRLIVILNDNDMSIAPPVGGLSAYLARLISSSE 203
Query: 92 FRQLCQEAFSSKDK-KQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+ L A K ++ + + F+R + G FE+LG YY+GP+DGHNLE
Sbjct: 204 YLGLRSLARRVTQKVSRRLTAAAGKAEEFARGMATGG--TLFEELGFYYVGPIDGHNLEH 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------LQQ---------------- 186
L VL+ V+ + G +L+HV+T+K K P + +Q+
Sbjct: 262 LIPVLENVRDA-EQGPILVHVVTKKGKGYAPAEKAADKYHGVQKFDVITGAQAKAPPGPP 320
Query: 187 --TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T++F L M GTGL+ FQ FP R FDVGIAEQHAVTFAAG
Sbjct: 321 AYTKVFADALLAEAERDATVCAITAAMPSGTGLDKFQAMFPERTFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA+G++PFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD T+
Sbjct: 381 LAAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTY 440
Query: 292 MACLPNMVVM 301
+A LPN VVM
Sbjct: 441 LASLPNFVVM 450
>gi|218197541|gb|EEC79968.1| hypothetical protein OsI_21592 [Oryza sativa Indica Group]
Length = 611
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/381 (40%), Positives = 204/381 (53%), Gaps = 94/381 (24%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI+Q GL E+ +D FG GH S+SAGL GMAV RDL G+ N +
Sbjct: 55 TIKQRKGLSGFTSRFESEYDPFGAGHGCNSLSAGL----------GMAVARDLGGRKNRI 104
Query: 56 ISVIVEGATIARMSYEAINNAG------------------------------VLNKALKR 85
++VI T+A YEA+ +AG L+ AL +
Sbjct: 105 VTVISNWTTMAGQVYEAMGHAGFLDSNMVVILNDSRHTLLPKADSQSKMSINALSSALSK 164
Query: 86 LHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIG 141
+ S+ FR+ + A K + FG MHE ID ++R + A FE+LGLYYIG
Sbjct: 165 VQSSKGFRKFREAA---KGLSKWFGKGMHEFAAKIDEYARGMIGPHGATLFEELGLYYIG 221
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEK--------AMLPLK---LQQTRLF 190
P+DG+N++DL VLK+V + G VL+HVITE EK + P + ++
Sbjct: 222 PIDGNNIDDLICVLKEVSTLDSTGPVLVHVITENEKDSGGEFNSEITPDEEGPPDSSQDI 281
Query: 191 CKILDNRMG-------------------------GGTGLN----LFQKHFPIRCFDVGIA 221
K L+N + GG G++ LFQ FP R FD+GIA
Sbjct: 282 LKFLENGLSRTYNDCFVESLIAEAENDKRIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIA 341
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTF+AGLA GLKPFC I S+FLQR +DQ+ DVD+QK+PVRFAI AGLVG++GP
Sbjct: 342 EQHAVTFSAGLACGGLKPFCIIPSTFLQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGP 401
Query: 282 THCGAFDTTFMACLPNMVVMK 302
T+ G FD TFM+CLPNM+VM
Sbjct: 402 TNSGPFDITFMSCLPNMIVMS 422
>gi|222634935|gb|EEE65067.1| hypothetical protein OsJ_20090 [Oryza sativa Japonica Group]
Length = 638
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 155/381 (40%), Positives = 204/381 (53%), Gaps = 94/381 (24%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI+Q GL E+ +D FG GH S+SAGL GMAV RDL G+ N +
Sbjct: 55 TIKQRKGLSGFTSRFESEYDPFGAGHGCNSLSAGL----------GMAVARDLGGRKNRI 104
Query: 56 ISVIVEGATIARMSYEAINNAG------------------------------VLNKALKR 85
++VI T+A YEA+ +AG L+ AL +
Sbjct: 105 VTVISNWTTMAGQVYEAMGHAGFLDSNMVVILNDSRHTLLPKADSQSKMSINALSSALSK 164
Query: 86 LHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIG 141
+ S+ FR+ + A K + FG MHE ID ++R + A FE+LGLYYIG
Sbjct: 165 VQSSKGFRKFREAA---KGLSKWFGKGMHEFAAKIDEYARGMIGPHGATLFEELGLYYIG 221
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEK--------AMLPLK---LQQTRLF 190
P+DG+N++DL VLK+V + G VL+HVITE EK + P + ++
Sbjct: 222 PIDGNNIDDLICVLKEVSTLDSTGPVLVHVITENEKDSGGEFNSEITPDEEGPPDSSQDI 281
Query: 191 CKILDNRMG-------------------------GGTGLN----LFQKHFPIRCFDVGIA 221
K L+N + GG G++ LFQ FP R FD+GIA
Sbjct: 282 LKFLENGLSRTYNDCFVESLIAEAENDKHIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIA 341
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTF+AGLA GLKPFC I S+FLQR +DQ+ DVD+QK+PVRFAI AGLVG++GP
Sbjct: 342 EQHAVTFSAGLACGGLKPFCIIPSTFLQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGP 401
Query: 282 THCGAFDTTFMACLPNMVVMK 302
T+ G FD TFM+CLPNM+VM
Sbjct: 402 TNSGPFDITFMSCLPNMIVMS 422
>gi|340030106|ref|ZP_08666169.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paracoccus sp. TRP]
Length = 641
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 158/368 (42%), Positives = 200/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG GHSSTSISA L G A+ R+L G
Sbjct: 99 IRTLRMEGGLSGFTKRSESPYDPFGAGHSSTSISAAL----------GFAMARELGGDPG 148
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL-KRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
++VI +GA A M++EA+NNAG L K L L+ N A S + G
Sbjct: 149 DAVAVIGDGAMSAGMAFEALNNAGDLGKRLFVVLNDNEMSIAPPTGALSRYLTRLYAEGP 208
Query: 113 MHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDLA 152
++ A ++ ++ G+R FE+LG YIGPVDGH+L+ L
Sbjct: 209 FQDLKAVAKGAVGFLPQPLQEGARRAKEMLKGMTVGGTLFEELGFSYIGPVDGHDLDQLL 268
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
+L+ V+A D G VLIHV+T K K P +
Sbjct: 269 PLLRTVRARAD-GPVLIHVVTRKGKGYAPAERAADKGHATAKFDVQTGAQAKAKSNAPSY 327
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F K L D R M GTGLNLF + FP RCFDVGIAEQHAVTF+AGLA
Sbjct: 328 TSVFAKALVDEASRDARIVAVTAAMPDGTGLNLFAERFPRRCFDVGIAEQHAVTFSAGLA 387
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A G+KPFCA+YS+FLQR +DQ+ HDV +Q+LPVRFAIDRAGLVGADG TH GA+D F++
Sbjct: 388 AGGMKPFCALYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGAYDIAFLS 447
Query: 294 CLPNMVVM 301
LP MVVM
Sbjct: 448 NLPGMVVM 455
>gi|297605162|ref|NP_001056773.2| Os06g0142900 [Oryza sativa Japonica Group]
gi|255676709|dbj|BAF18687.2| Os06g0142900 [Oryza sativa Japonica Group]
Length = 562
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 155/381 (40%), Positives = 204/381 (53%), Gaps = 94/381 (24%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI+Q GL E+ +D FG GH S+SAGL GMAV RDL G+ N +
Sbjct: 55 TIKQRKGLSGFTSRFESEYDPFGAGHGCNSLSAGL----------GMAVARDLGGRKNRI 104
Query: 56 ISVIVEGATIARMSYEAINNAG------------------------------VLNKALKR 85
++VI T+A YEA+ +AG L+ AL +
Sbjct: 105 VTVISNWTTMAGQVYEAMGHAGFLDSNMVVILNDSRHTLLPKADSQSKMSINALSSALSK 164
Query: 86 LHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIG 141
+ S+ FR+ + A K + FG MHE ID ++R + A FE+LGLYYIG
Sbjct: 165 VQSSKGFRKFREAA---KGLSKWFGKGMHEFAAKIDEYARGMIGPHGATLFEELGLYYIG 221
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEK--------AMLPLK---LQQTRLF 190
P+DG+N++DL VLK+V + G VL+HVITE EK + P + ++
Sbjct: 222 PIDGNNIDDLICVLKEVSTLDSTGPVLVHVITENEKDSGGEFNSEITPDEEGPPDSSQDI 281
Query: 191 CKILDNRMG-------------------------GGTGLN----LFQKHFPIRCFDVGIA 221
K L+N + GG G++ LFQ FP R FD+GIA
Sbjct: 282 LKFLENGLSRTYNDCFVESLIAEAENDKHIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIA 341
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTF+AGLA GLKPFC I S+FLQR +DQ+ DVD+QK+PVRFAI AGLVG++GP
Sbjct: 342 EQHAVTFSAGLACGGLKPFCIIPSTFLQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGP 401
Query: 282 THCGAFDTTFMACLPNMVVMK 302
T+ G FD TFM+CLPNM+VM
Sbjct: 402 TNSGPFDITFMSCLPNMIVMS 422
>gi|114329068|ref|YP_746225.1| 1-deoxy-D-xylulose-5-phosphate synthase [Granulibacter bethesdensis
CGDNIH1]
gi|114317242|gb|ABI63302.1| 1-deoxy-D-xylulose 5-phosphate synthase [Granulibacter bethesdensis
CGDNIH1]
Length = 669
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 158/384 (41%), Positives = 199/384 (51%), Gaps = 94/384 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLL---- 49
+RT+R GL E+ +D FG GHSSTSISAGL GMAV RDL
Sbjct: 99 IRTLRMGGGLSGFTKRSESEYDPFGAGHSSTSISAGL----------GMAVARDLRRAAG 148
Query: 50 ---GKNNHVISVIVEGATIARMSYEAINNAGVLNKALKRLHSN------PQFRQLC---Q 97
HVI+VI +GA A M YEA+NNAG L L + ++ P +
Sbjct: 149 EVGAGPEHVIAVIGDGAMSAGMVYEAMNNAGSLKSRLVVILNDNDMSIAPPVGAMSAYLS 208
Query: 98 EAFSSKD--KKQKFGGQMHEIDAFSREIEAGSR------------ACFFEDLGLYYIGPV 143
SS+ + G+M F R IE +R FE+LG YY+GP+
Sbjct: 209 RLLSSRSFLNLRDLAGKMAR--HFPRGIERTARRAEEYARGILTGGTLFEELGFYYVGPI 266
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------------- 186
DGHNL+ L VL+ V+ + G +L+H IT K P +
Sbjct: 267 DGHNLDHLLPVLRNVRDAEETGPILVHAITRKGHGYAPAEASADKYHAVSRFNVVTGEQI 326
Query: 187 ---------------TRLFCKIL-----DN--------RMGGGTGLNLFQKHFPIRCFDV 218
T++F + L DN M GTGL+ F+K FP RCFDV
Sbjct: 327 KPAPVPGAKPAPPTYTKVFAEALIAAAEDNPRVVAINAAMPSGTGLDAFEKRFPDRCFDV 386
Query: 219 GIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGA 278
GIAEQHAVTFAAGLA EG+ PFCA+YS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGA
Sbjct: 387 GIAEQHAVTFAAGLAVEGMVPFCALYSTFLQRGYDQLVHDVAIQHLPVRFAIDRAGLVGA 446
Query: 279 DGPTHCGAFDTTFMACLPNMVVMK 302
DG TH G+FD ++ CLP M++M
Sbjct: 447 DGATHAGSFDMAYLGCLPGMMIMS 470
>gi|55295806|dbj|BAD67657.1| putative 1-deoxy-D-xylulose 5-phosphate synthase 1 [Oryza sativa
Japonica Group]
gi|215768492|dbj|BAH00721.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 565
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 155/381 (40%), Positives = 204/381 (53%), Gaps = 94/381 (24%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI+Q GL E+ +D FG GH S+SAGL GMAV RDL G+ N +
Sbjct: 55 TIKQRKGLSGFTSRFESEYDPFGAGHGCNSLSAGL----------GMAVARDLGGRKNRI 104
Query: 56 ISVIVEGATIARMSYEAINNAG------------------------------VLNKALKR 85
++VI T+A YEA+ +AG L+ AL +
Sbjct: 105 VTVISNWTTMAGQVYEAMGHAGFLDSNMVVILNDSRHTLLPKADSQSKMSINALSSALSK 164
Query: 86 LHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIG 141
+ S+ FR+ + A K + FG MHE ID ++R + A FE+LGLYYIG
Sbjct: 165 VQSSKGFRKFREAA---KGLSKWFGKGMHEFAAKIDEYARGMIGPHGATLFEELGLYYIG 221
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEK--------AMLPLK---LQQTRLF 190
P+DG+N++DL VLK+V + G VL+HVITE EK + P + ++
Sbjct: 222 PIDGNNIDDLICVLKEVSTLDSTGPVLVHVITENEKDSGGEFNSEITPDEEGPPDSSQDI 281
Query: 191 CKILDNRMG-------------------------GGTGLN----LFQKHFPIRCFDVGIA 221
K L+N + GG G++ LFQ FP R FD+GIA
Sbjct: 282 LKFLENGLSRTYNDCFVESLIAEAENDKHIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIA 341
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTF+AGLA GLKPFC I S+FLQR +DQ+ DVD+QK+PVRFAI AGLVG++GP
Sbjct: 342 EQHAVTFSAGLACGGLKPFCIIPSTFLQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGP 401
Query: 282 THCGAFDTTFMACLPNMVVMK 302
T+ G FD TFM+CLPNM+VM
Sbjct: 402 TNSGPFDITFMSCLPNMIVMS 422
>gi|304321304|ref|YP_003854947.1| 1-deoxy-D-xylulose-5-phosphate synthase [Parvularcula bermudensis
HTCC2503]
gi|303300206|gb|ADM09805.1| 1-deoxy-D-xylulose-5-phosphate synthase [Parvularcula bermudensis
HTCC2503]
Length = 638
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 153/372 (41%), Positives = 200/372 (53%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG H++TSISA L GMAV RDL G N
Sbjct: 92 IRTLRQKDGLSGFTKRTESEYDPFGAAHAATSISAAL----------GMAVARDLRGDVN 141
Query: 54 HVISVIVEGATIARMSYEAINNAG----------------------VLNKALKRLHSNPQ 91
V++VI +G+ A M+YEA+NNAG ++ L R+ S+ +
Sbjct: 142 RVVAVIGDGSMSAGMAYEAMNNAGDRGKQLTVILNDNDMSIAPPVGAMSAYLARVASSDK 201
Query: 92 ---FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
FR L ++ +K + + + + R G FE+LG YY+GP+DGHNL
Sbjct: 202 YHAFRNLAKQL--AKRLPKGLYTSAEKFEEYGRAFVTGG--TMFEELGFYYVGPIDGHNL 257
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------------------ 184
+ L VL+ V+ + D V++HV+T+K K P +
Sbjct: 258 DHLVPVLENVRELTD-APVMVHVVTQKGKGYAPAESAADKYHGVAKFDVVSGKQHKPKPA 316
Query: 185 --QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F L D R M GTG++ F + FP R FDVGIAEQHAVTFA
Sbjct: 317 APSYTSVFAGQLIKEAERDERVVGITAAMPSGTGIDKFMERFPDRTFDVGIAEQHAVTFA 376
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAAEG+ PF AIYS+FLQR +D V HDV LQ LPVRFA+DRAGLVGADG TH GAFD
Sbjct: 377 AGLAAEGMVPFAAIYSTFLQRAYDSVVHDVALQNLPVRFALDRAGLVGADGATHAGAFDI 436
Query: 290 TFMACLPNMVVM 301
++ CLPNMV+M
Sbjct: 437 AYLGCLPNMVLM 448
>gi|420240106|ref|ZP_14744367.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF080]
gi|398077668|gb|EJL68635.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF080]
Length = 639
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 159/368 (43%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV DL G
Sbjct: 94 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAADLSGSKR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSS---------- 102
+VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+
Sbjct: 144 NVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 103 ----KDKKQKFGGQM-HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+D +K + +D A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDLGKKLTAYLGKNVDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRDNAR-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKSKPNAPSY 322
Query: 184 --------LQQTRLFCKIL--DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+Q+ L KI+ M GTG++ FP R FDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFGEALVQEASLDEKIVGVTAAMPNGTGIDKLADVFPARTFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPFCA+YS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+FDTTF+A
Sbjct: 383 AEGYKPFCALYSTFLQRGYDQVVHDVAIQGLPVRFPIDRAGLVGADGPTHAGSFDTTFLA 442
Query: 294 CLPNMVVM 301
LP MVVM
Sbjct: 443 TLPGMVVM 450
>gi|94496312|ref|ZP_01302889.1| deoxyxylulose-5-phosphate synthase [Sphingomonas sp. SKA58]
gi|94424058|gb|EAT09082.1| deoxyxylulose-5-phosphate synthase [Sphingomonas sp. SKA58]
Length = 639
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 156/372 (41%), Positives = 198/372 (53%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G A+ + K
Sbjct: 94 IRTLRQGGGLSGFTRRAESDYDPFGAAHSSTSISAAL----------GFAIANKMQDKPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L RL S+ +
Sbjct: 144 KAIAVIGDGAMSAGMAYEAMNNARDAGNRLVVILNDNDMSIAPPVGGLSAYLARLVSSRE 203
Query: 92 F---RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
F R L ++ ++ + + D F+R + G FE+LG YY+GP+DGHNL
Sbjct: 204 FLGLRDLARKL--ARKLPRPLHNAARKTDEFARGMAMGG--TLFEELGFYYVGPIDGHNL 259
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------------------ 184
+ L VL+ V+ G L+HV+T+K K P +
Sbjct: 260 DQLIPVLENVRDAAQ-GPCLVHVVTQKGKGYAPAEAAADKYHGVQKFDVITGTQDKAPPG 318
Query: 185 --QQTRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F K L M GTGL+ FQ FP R FDVGIAEQHAVTFA
Sbjct: 319 PPSYTNVFAKALIAEAQRDPAVCAITAAMPSGTGLDKFQAAFPDRIFDVGIAEQHAVTFA 378
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA+G++PFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 379 AGLAAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDV 438
Query: 290 TFMACLPNMVVM 301
T++A LPNMVVM
Sbjct: 439 TYLATLPNMVVM 450
>gi|356550766|ref|XP_003543755.1| PREDICTED: LOW QUALITY PROTEIN: probable
1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like, partial [Glycine max]
Length = 478
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 140/265 (52%), Positives = 166/265 (62%), Gaps = 52/265 (19%)
Query: 77 GVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFF 132
G L++AL L++N +F L + A K ++ G + HE +D++ R + G+ AC F
Sbjct: 32 GALSRALAXLNTNSKFHXLREVA---KGITKQIGSRAHEFASKLDSYIRGMAGGAGACLF 88
Query: 133 EDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQ------- 185
E+LGL+YIGPVD H++ K +P G +LIHVITEK K P ++
Sbjct: 89 EELGLFYIGPVDSHDI---------XKGMPTLGPILIHVITEKGKRYHPAEVAPDKMHGA 139
Query: 186 ---------------QTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFD 217
T+ F + L MGGGTGLNLFQK FP RCFD
Sbjct: 140 VKFDPKSRKQLKSKASTQYFAESLTAEAEVDEKIVAIHAAMGGGTGLNLFQKRFPERCFD 199
Query: 218 VGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQV-AHDVDLQKLPVRFAIDRAGLV 276
VGIAEQHAVTFAAGLAAEGL F AIYSSFLQR +DQV HDVDLQKLPVRFA+D AGLV
Sbjct: 200 VGIAEQHAVTFAAGLAAEGLNLFRAIYSSFLQRNYDQVRTHDVDLQKLPVRFALDAAGLV 259
Query: 277 GADGPTHCGAFDTTFMACLPNMVVM 301
GADGPTHCGAFDTTFMACLPNMVVM
Sbjct: 260 GADGPTHCGAFDTTFMACLPNMVVM 284
>gi|329851865|ref|ZP_08266546.1| 1-deoxy-D-xylulose-5-phosphate synthase [Asticcacaulis biprosthecum
C19]
gi|328839714|gb|EGF89287.1| 1-deoxy-D-xylulose-5-phosphate synthase [Asticcacaulis biprosthecum
C19]
Length = 639
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 153/370 (41%), Positives = 203/370 (54%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+R++RQ GL E+ +D FG H++TSISA L G RD G+++
Sbjct: 92 IRSLRQGGGLSGFTKRSESPYDPFGAAHAATSISAAL----------GFCAARDQKGEDH 141
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
VI+VI +G+ A M+YEA+NNA G ++ L L S
Sbjct: 142 KVIAVIGDGSMSAGMAYEAMNNAAETTRNLTVILNDNDMSIAPPVGGMSAYLANLVSGGA 201
Query: 92 FRQLCQEAFSSKDK-KQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
++ + + S ++ + + + + FSR G FFE+LG YY+GP+DGHN+E
Sbjct: 202 YQAVRRWGKSVAERLPRSIFELVRKSEEFSRTYVTG--GTFFEELGFYYVGPIDGHNMEH 259
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------------------L 184
L VL++V+ I D VL+HV+T+K K P +
Sbjct: 260 LCQVLRRVREIRDR-PVLVHVVTQKGKGYEPAENAADKYHGVAKFDVITGEQSKPKSNAP 318
Query: 185 QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F L D+R M GTGL+ F + FP RC+DVGIAEQHAVTFAAG
Sbjct: 319 SYTEVFASELIKQARRDDRIVAITAAMPSGTGLDRFAEVFPTRCYDVGIAEQHAVTFAAG 378
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAAEG+KPFCAIYS+FLQR +DQVAHDV LQ LPVRFAIDRAGLVGADG TH GAFD +
Sbjct: 379 LAAEGMKPFCAIYSTFLQRGYDQVAHDVSLQNLPVRFAIDRAGLVGADGATHAGAFDIGY 438
Query: 292 MACLPNMVVM 301
+ LP M++M
Sbjct: 439 LGALPQMMIM 448
>gi|340779464|ref|ZP_08699407.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter aceti NBRC
14818]
Length = 645
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 157/377 (41%), Positives = 204/377 (54%), Gaps = 87/377 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 94 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 143
Query: 54 ------HVISVIVEGATIARMSYEAINNAGVLNKALKRL-----------------HSNP 90
+VI+VI +G+ A M+YEA+NNA V + +RL SN
Sbjct: 144 PSYRERNVIAVIGDGSISAGMAYEAMNNAAVAGEGAERLIVILNDNEMSIAPPVGSMSNY 203
Query: 91 QFRQLCQEAFSS-KDKKQKFGGQM-HEIDAFSREIEAGSRA-----CFFEDLGLYYIGPV 143
R + F +D KF ++ + ++ +++ E +R FE+LG YY+GPV
Sbjct: 204 LSRLMSSRQFMGLRDLAGKFVKKLPNRLERTAKKAEEYARGMITGGTLFEELGFYYVGPV 263
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EK 177
DGH++ L +L+ ++ D G +L+HVITEK +K
Sbjct: 264 DGHDMTQLVPILRNLRDT-DQGPILLHVITEKGHGYKPAEAAGDKYHAVAKFNVVTGEQK 322
Query: 178 AMLPLKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQH 224
P T +F + L DNR M GTGL+ F FP R FDVGIAEQH
Sbjct: 323 KAPPGPPSWTNIFARELIDRASTDNRIAAITAAMPSGTGLDKFATKFPDRFFDVGIAEQH 382
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFAAG+A EGL+PFCAIYS+FLQR +DQV HDV LQKLPVRFAIDRAGLVGADG TH
Sbjct: 383 AVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGATHA 442
Query: 285 GAFDTTFMACLPNMVVM 301
G+FD ++ CLP M +M
Sbjct: 443 GSFDIAYLGCLPGMTIM 459
>gi|357032439|ref|ZP_09094377.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter morbifer
G707]
gi|356413976|gb|EHH67625.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter morbifer
G707]
Length = 660
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 157/384 (40%), Positives = 203/384 (52%), Gaps = 100/384 (26%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 101 IRTLRQPNGLSGFTRRVESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 150
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 151 PSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLNDNEMSIAPPVGSMSDY 210
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH-EIDAFSREIEAGSRA-----CFFEDLG 136
L RL S+ QF FS +D K ++ +I+ ++ E +R FE+LG
Sbjct: 211 LSRLMSSRQF-------FSLRDLAGKVAKRLPGKIERTAKRAEEYARGMITGGTLFEELG 263
Query: 137 LYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------ 184
YY+GPV+GH++ L +L+ ++ D G +L+HVITEK + P +
Sbjct: 264 FYYVGPVNGHDMSQLVPILRNLRDADDQGPILLHVITEKGRGYKPAEAAGDKYHAVSKFN 323
Query: 185 --------------QQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFD 217
T +F + L R M GTGL F K P R FD
Sbjct: 324 VVTGEQKKAPAGPPSYTSVFSRELMRRAETDDKLITITAAMPSGTGLGAFAKAHPDRFFD 383
Query: 218 VGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVG 277
VGIAEQHAVTFAAG+A+EGL+PFCAIYS+FLQR +DQV HDV LQ LPVRFAIDRAGLVG
Sbjct: 384 VGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGLVG 443
Query: 278 ADGPTHCGAFDTTFMACLPNMVVM 301
ADG TH G+FD ++ CLPNMVVM
Sbjct: 444 ADGATHAGSFDLNYLCCLPNMVVM 467
>gi|389876824|ref|YP_006370389.1| deoxyxylulose-5-phosphate synthase [Tistrella mobilis KA081020-065]
gi|388527608|gb|AFK52805.1| deoxyxylulose-5-phosphate synthase [Tistrella mobilis KA081020-065]
Length = 645
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 158/372 (42%), Positives = 198/372 (53%), Gaps = 84/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L G+
Sbjct: 94 IRTLRQKDGLSGFTKRDESEYDPFGAAHSSTSISAGL----------GMAVASRLKGEEE 143
Query: 54 H-VISVIVEGATIARMSYEAINNAGVL----------------------NKALKRLHSNP 90
VI+VI +GA A M+YEA+NNAG + + L RL S+
Sbjct: 144 RRVIAVIGDGAMSAGMAYEAMNNAGAMPDRLIVILNDNDMSIAPPTGAMSAYLSRLISSR 203
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNL 148
+R L A K + F + + + E G + FE+LG YY+GP+DGHNL
Sbjct: 204 SYRSLRDIA---KQMARVFPKPLEQAARRAEEFARGLVTGGTLFEELGFYYVGPIDGHNL 260
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK------------------------- 183
+ L VL V+ G VLIH++T+K K P +
Sbjct: 261 DHLLPVLLNVRDADQDGPVLIHIVTQKGKGYPPAEKAADKYHGVAKFDVVTGAQVKPAAG 320
Query: 184 -LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T ++ L D R M GTGL+ F + FP R FDVGIAEQHAVTFA
Sbjct: 321 APSYTNVYADALIAEAEHDPRVLAVTAAMPTGTGLDRFGRRFPDRVFDVGIAEQHAVTFA 380
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAAEG+KPF IYS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 381 AGLAAEGMKPFATIYSTFLQRAYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHMGSFDL 440
Query: 290 TFMACLPNMVVM 301
T++ CLP+ VVM
Sbjct: 441 TYLCCLPDFVVM 452
>gi|430002425|emb|CCF18206.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein [Rhizobium
sp.]
Length = 639
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 160/368 (43%), Positives = 199/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV DL G
Sbjct: 94 IRTLRQENGLSGFTRRAESDYDPFGAAHSSTSISAGL----------GMAVAADLSGSKR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
HVI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ + G
Sbjct: 144 HVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 113 ---MHEID-------------AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ EI A +R +E + FE++G Y+IGP+DGH+ E L
Sbjct: 204 YMGVREIGKKLTAYLGKGFDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFEHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV T+K K P +
Sbjct: 264 PVLRNVRD-NGQGPVLIHVCTQKGKGYPPAEAAADKYHGVNKFDVITGTQAKAKPNAPSY 322
Query: 184 --------LQQTRLFCKI--LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+Q+ R KI + M GTG++ + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFGESLVQEARFDEKIVGITAAMPNGTGIDKLAEVFPSRTFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPFCA+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDTTF+A
Sbjct: 383 AEGFKPFCALYSTFLQRGYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTFLA 442
Query: 294 CLPNMVVM 301
LP MVVM
Sbjct: 443 TLPGMVVM 450
>gi|334139802|ref|YP_004533000.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. PP1Y]
gi|333937824|emb|CCA91182.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. PP1Y]
Length = 640
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 159/370 (42%), Positives = 200/370 (54%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G A+ L +
Sbjct: 94 IRTLRQGGGLSGFTKRSESEYDPFGTAHSSTSISAAL----------GFAIANKLSNQPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L +L S+
Sbjct: 144 RGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDNDMSIAPPVGGLSAYLAQLVSSRP 203
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
F + A S+ + + D F+R + G FE+LG YY+GPVDGHNLE
Sbjct: 204 FLNIRDFARKVSRRLPEALHRAAKKTDEFARGMAMG--GTLFEELGFYYVGPVDGHNLEQ 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------LQQ---------------- 186
L +L+ V+ + G +LIHV+T+K K P + +Q+
Sbjct: 262 LIPILENVRDAAE-GPILIHVVTKKGKGYAPAEEAADKYHGVQKFNVVTGEQAKAPAGPP 320
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F K L D R M GTGL+ F FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTGVFAKALIAEAKGDPRVCAITAAMPSGTGLDKFASQFPERSFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA+G++PFCAIYS+FLQR FDQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD T+
Sbjct: 381 LAAQGMRPFCAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTY 440
Query: 292 MACLPNMVVM 301
+A LPN VVM
Sbjct: 441 LATLPNFVVM 450
>gi|359399199|ref|ZP_09192204.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium
pentaromativorans US6-1]
gi|357599405|gb|EHJ61118.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium
pentaromativorans US6-1]
Length = 640
Score = 246 bits (629), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 159/370 (42%), Positives = 200/370 (54%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G A+ L +
Sbjct: 94 IRTLRQGGGLSGFTKRSESEYDPFGTAHSSTSISAAL----------GFAIANKLSNQPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L +L S+
Sbjct: 144 RGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDNDMSIAPPVGGLSAYLAQLVSSRP 203
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
F + A S+ + + D F+R + G FE+LG YY+GPVDGHNLE
Sbjct: 204 FLNIRDFARKVSRRLPEALHRAAKKTDEFARGMAMG--GTLFEELGFYYVGPVDGHNLEQ 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------LQQ---------------- 186
L +L+ V+ + G +LIHV+T+K K P + +Q+
Sbjct: 262 LIPILENVRDAAE-GPILIHVVTKKGKGYAPAEEAADKYHGVQKFNVVTGEQAKAPAGPP 320
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F K L D R M GTGL+ F FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTGVFAKALIAEAKGDPRVCAITAAMPSGTGLDKFASQFPERSFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA+G++PFCAIYS+FLQR FDQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD T+
Sbjct: 381 LAAQGMRPFCAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTY 440
Query: 292 MACLPNMVVM 301
+A LPN VVM
Sbjct: 441 LATLPNFVVM 450
>gi|407770454|ref|ZP_11117823.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassospira xiamenensis
M-5 = DSM 17429]
gi|407286477|gb|EKF11964.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassospira xiamenensis
M-5 = DSM 17429]
Length = 639
Score = 246 bits (629), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 150/371 (40%), Positives = 199/371 (53%), Gaps = 82/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG-KN 52
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAV L K
Sbjct: 94 IRTLRQGGGLSGFTKRSESEYDPFGAGHSSTSISAGL----------GMAVANQLSDDKR 143
Query: 53 NHVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNP 90
+VI+VI +G+ A M+YEA+NNA G ++ L RL S
Sbjct: 144 KNVIAVIGDGSMSAGMAYEAMNNAAAADQRMIVILNDNDMSIAPPVGSMSGYLSRLISGK 203
Query: 91 QFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
++ L A +K ++ +I+ ++R + G FE++G +Y+GP+DGHNL+
Sbjct: 204 GYQGLRNAAKGLTKHLPRQIEEAARKIEEYTRGMVTG--GTLFEEMGFFYVGPIDGHNLD 261
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP---------------------------- 181
L VLK V+ G +L+HV+T+K K P
Sbjct: 262 HLLPVLKNVRDADVDGPILVHVVTQKGKGYGPAENAADKYHGVAKFDVVTGKQAKATPNA 321
Query: 182 -----------LKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
KL +T + M GTG+N+F + FP R FDVGIAEQHAVTFAA
Sbjct: 322 PSYTKVYGETLTKLAETDDKITAITAAMPSGTGVNIFAERFPDRAFDVGIAEQHAVTFAA 381
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPFC +YS+FLQR +DQV HDV +Q LPVRFA+DRAGLVGADG TH GA+D
Sbjct: 382 GMACEGYKPFCTLYSTFLQRAYDQVVHDVVIQNLPVRFAMDRAGLVGADGATHAGAYDIA 441
Query: 291 FMACLPNMVVM 301
++ CLPN+V+M
Sbjct: 442 YLGCLPNIVLM 452
>gi|329888093|ref|ZP_08266691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas diminuta
ATCC 11568]
gi|328846649|gb|EGF96211.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas diminuta
ATCC 11568]
Length = 636
Score = 246 bits (628), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 151/369 (40%), Positives = 192/369 (52%), Gaps = 79/369 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRT+RQ GL E+ +D FG H+STSISA L G A RD G NN
Sbjct: 91 MRTLRQGGGLSGFTKRSESEYDPFGAAHASTSISAAL----------GFAAARDAKGGNN 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--VLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGG 111
V++VI +G+ A M+YEA+NNA + + L+ N S+ KQ GG
Sbjct: 141 RVVAVIGDGSMSAGMAYEAMNNAAEATSGQLMVVLNDNDMSIAPPVGGMSAYLAKQVSGG 200
Query: 112 QMHEI--------DAFSREIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDL 151
I D R +R FE+LG YY+GP+DGH++E+L
Sbjct: 201 AYQNIRKVGKKFVDHMPRPFRDAARKAEEYARGMIVGGTLFEELGFYYVGPIDGHDMENL 260
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL---------------------- 189
+LK AI D VL+HV+T+K K P + +L
Sbjct: 261 VPILKNAAAITDR-PVLVHVVTQKGKGYAPAESSADKLHAVVKFDVVSGKQAKAVSNAPS 319
Query: 190 FCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
+ K+ M GTGL+LF + FP R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTKVFGTELIKHAQVDPTIMAITAAMPSGTGLDLFGQAFPDRTFDVGIAEQHAVTFAAGL 379
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
AA+G+KP CA+YS+FLQR +DQV HDV +Q LPVRFA+DRAGLVGADG TH G+FD +M
Sbjct: 380 AADGMKPVCALYSTFLQRGYDQVVHDVAIQSLPVRFAMDRAGLVGADGSTHAGSFDIGYM 439
Query: 293 ACLPNMVVM 301
LP MV+M
Sbjct: 440 GALPGMVLM 448
>gi|427411739|ref|ZP_18901941.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium yanoikuyae
ATCC 51230]
gi|425710029|gb|EKU73052.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium yanoikuyae
ATCC 51230]
Length = 639
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 161/373 (43%), Positives = 200/373 (53%), Gaps = 88/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G AV + K
Sbjct: 93 IRTLRQGGGLSGFTKRAESEYDPFGAAHSSTSISAAL----------GFAVANKMQDKPG 142
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L RL S+ +
Sbjct: 143 KGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDNDMSIAPPVGGLSAYLARLVSSRE 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
F L A K +K +H+ D F+R + G FE+LG YY+GP+DGHN
Sbjct: 203 FLGLRDMA---KKLARKLPRPLHKAAKKTDEFARGMATG--GTLFEELGFYYVGPIDGHN 257
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------------- 184
LE L VL+ V+ + G LIHV+T+K K P +
Sbjct: 258 LEHLIPVLENVRDAAE-GPCLIHVVTQKGKGYGPAEAAADKYHGVQKFDVITGTQAKAPP 316
Query: 185 ---QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T +F + L D R M GTGL+ F+ FP R FDVGIAEQHAVTF
Sbjct: 317 GPPSYTNVFAQALIAEAQRDPRVCAITAAMPSGTGLDKFELAFPDRTFDVGIAEQHAVTF 376
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLAA+G++PFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 377 AAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFD 436
Query: 289 TTFMACLPNMVVM 301
T++A LPN VVM
Sbjct: 437 VTYLASLPNFVVM 449
>gi|384261859|ref|YP_005417045.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Rhodospirillum
photometricum DSM 122]
gi|378402959|emb|CCG08075.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Rhodospirillum
photometricum DSM 122]
Length = 640
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 195/372 (52%), Gaps = 84/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MR++RQ G+ E+ +D FG GHSSTSISAGL GMA +LLG +
Sbjct: 94 MRSLRQGGGISGFTLREESPYDPFGAGHSSTSISAGL----------GMAAAAELLGDDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL-----------------------KRLHSNP 90
VI+VI +G+ A M+YEA+NNAG + L + L SN
Sbjct: 144 LVIAVIGDGSMSAGMAYEAMNNAGAMKSRLIVILNDNDMSIAPPVGAMSAYLSRLLSSNS 203
Query: 91 QF--RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
R L +E S + + E ++R I G FE+LG YY+GP+DGH +
Sbjct: 204 WLSIRDLAKEVASHLPPPLERTARRAE--EYARSIMTGGN-TLFEELGFYYVGPIDGHRM 260
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------------------ 184
+ L VL+ V+ G VLIHV+T K K P +
Sbjct: 261 DHLVPVLRNVRDGRRDGPVLIHVVTRKGKGYAPAEAAPDKYHGVSRFNIVTGVQDKGKPQ 320
Query: 185 --QQTRLFCK------ILDNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F K I D R M GTGL+ F + FP R +DVGIAEQHAVTFA
Sbjct: 321 APSYTNVFGKSLLTEAIRDPRIVAITAAMPSGTGLDKFAETFPDRTYDVGIAEQHAVTFA 380
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EGL+PF A+YS+FLQR FDQV HDV LQ LPVR A+DRAG VGADG TH G FD
Sbjct: 381 AGLACEGLRPFVAMYSTFLQRAFDQVVHDVALQNLPVRIAVDRAGFVGADGATHGGVFDM 440
Query: 290 TFMACLPNMVVM 301
F+ C+PN+V+M
Sbjct: 441 AFLGCIPNLVIM 452
>gi|397677362|ref|YP_006518900.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
mobilis ATCC 29191]
gi|395398051|gb|AFN57378.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
mobilis ATCC 29191]
Length = 650
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 199/370 (53%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +DAFG HSSTSISA L G A+ L ++
Sbjct: 94 IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAAL----------GFAMASKLSDSDD 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
+++I +G+ A M+YEA+NNA G L+ L RL S+
Sbjct: 144 KAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDNEMSISPPVGALSSYLSRLISSRP 203
Query: 92 FRQLCQEAFSSKDKKQK-FGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
F L ++ K + D ++R + G FFE+LG YY+GPVDGHNL+
Sbjct: 204 FMNLRDIMRGVVNRMPKGLATAARKADEYARGMATG--GTFFEELGFYYVGPVDGHNLDQ 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VL+ V+ D G +L+HV+T K + P + +
Sbjct: 262 LIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPP 320
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D++ M GTGL+ FQ++FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA G KPFC +YS+FLQR +DQ+ HDV +Q LPVRFA+DRAGLVGADG TH G+FD F
Sbjct: 381 LAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDIAF 440
Query: 292 MACLPNMVVM 301
M LPNMVVM
Sbjct: 441 MVNLPNMVVM 450
>gi|56552494|ref|YP_163333.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
mobilis ZM4]
gi|56544068|gb|AAV90222.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 660
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 199/370 (53%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +DAFG HSSTSISA L G A+ L ++
Sbjct: 104 IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAAL----------GFAMASKLSDSDD 153
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
+++I +G+ A M+YEA+NNA G L+ L RL S+
Sbjct: 154 KAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDNEMSISPPVGALSSYLSRLISSRP 213
Query: 92 FRQLCQEAFSSKDKKQK-FGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
F L ++ K + D ++R + G FFE+LG YY+GPVDGHNL+
Sbjct: 214 FMNLRDIMRGVVNRMPKGLATAARKADEYARGMATG--GTFFEELGFYYVGPVDGHNLDQ 271
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VL+ V+ D G +L+HV+T K + P + +
Sbjct: 272 LIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPP 330
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D++ M GTGL+ FQ++FP R FDVGIAEQHAVTFAAG
Sbjct: 331 SYTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAG 390
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA G KPFC +YS+FLQR +DQ+ HDV +Q LPVRFA+DRAGLVGADG TH G+FD F
Sbjct: 391 LAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAF 450
Query: 292 MACLPNMVVM 301
M LPNMVVM
Sbjct: 451 MVNLPNMVVM 460
>gi|260753843|ref|YP_003226736.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|258553206|gb|ACV76152.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 650
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 199/370 (53%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +DAFG HSSTSISA L G A+ L ++
Sbjct: 94 IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAAL----------GFAMASKLSDSDD 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
+++I +G+ A M+YEA+NNA G L+ L RL S+
Sbjct: 144 KAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDNEMSISPPVGALSSYLSRLISSRP 203
Query: 92 FRQLCQEAFSSKDKKQK-FGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
F L ++ K + D ++R + G FFE+LG YY+GPVDGHNL+
Sbjct: 204 FMNLRDIMRGVVNRMPKGLATAARKADEYARGMATG--GTFFEELGFYYVGPVDGHNLDQ 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VL+ V+ D G +L+HV+T K + P + +
Sbjct: 262 LIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPP 320
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D++ M GTGL+ FQ++FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA G KPFC +YS+FLQR +DQ+ HDV +Q LPVRFA+DRAGLVGADG TH G+FD F
Sbjct: 381 LAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAF 440
Query: 292 MACLPNMVVM 301
M LPNMVVM
Sbjct: 441 MVNLPNMVVM 450
>gi|224141855|ref|XP_002324277.1| predicted protein [Populus trichocarpa]
gi|222865711|gb|EEF02842.1| predicted protein [Populus trichocarpa]
Length = 612
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 158/383 (41%), Positives = 201/383 (52%), Gaps = 98/383 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +D FG GH SISAGL GMAV RD+ GK
Sbjct: 56 MHTLRQKDGLSGFTSRSESEYDPFGAGHGCNSISAGL----------GMAVARDIKGKRE 105
Query: 54 HVISVIVEGATIARMSYEAINNAG------------------------------VLNKAL 83
H+++VI G T+A YEA+ NAG L+ L
Sbjct: 106 HIVTVIGNGTTMAGQVYEAMGNAGYLDSNMIVILNDSRHSLHPKIEEGSKTSINALSSTL 165
Query: 84 KRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYY 139
+L S+ FR+L + A K ++ G M+E +D ++R + + FE+LGLYY
Sbjct: 166 SKLQSSKSFRRLREVA---KGVTKRIG--MYELAAKVDEYARGMMGPLGSTLFEELGLYY 220
Query: 140 IGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK------EKAMLPLKLQQTRLFC-- 191
IGPVDGHN+EDL VL++V + G VLIHVITE+ ++ + QQ +F
Sbjct: 221 IGPVDGHNIEDLVCVLQEVSTLESMGPVLIHVITEENQCAEHKQQTEAMGNQQEGMFSVS 280
Query: 192 ---KILDNRMGGGT------------------------------GLNLFQKHFPIRCFDV 218
+L N M T LFQ+ FP R F V
Sbjct: 281 AGYAVLSN-MHTQTYSDCFVEALIMEAEKDKDIVVVHAGKEMEPSFQLFQERFPHRFFYV 339
Query: 219 GIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGA 278
G+AEQHAVTF+AGL+ GLKPFC I S+FLQR +DQV HDVD Q++PVRF I AGLVG
Sbjct: 340 GMAEQHAVTFSAGLSCGGLKPFCIIPSAFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGP 399
Query: 279 DGPTHCGAFDTTFMACLPNMVVM 301
DGPT CGAFD TFM+CLPNM+VM
Sbjct: 400 DGPTMCGAFDITFMSCLPNMIVM 422
>gi|381202917|ref|ZP_09910026.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium yanoikuyae
XLDN2-5]
Length = 640
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 161/373 (43%), Positives = 200/373 (53%), Gaps = 88/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G AV + K
Sbjct: 93 IRTLRQGGGLSGFTKRAESEYDPFGAAHSSTSISAAL----------GFAVANKMQDKPG 142
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L RL S+ +
Sbjct: 143 KGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDNDMSIAPPVGGLSAYLARLVSSRE 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
F L A K +K +H+ D F+R + G FE+LG YY+GP+DGHN
Sbjct: 203 FLGLRDMA---KKLARKLPRPLHKAAKKTDEFARGMATG--GTLFEELGFYYVGPIDGHN 257
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------------- 184
LE L VL+ V+ + G LIHV+T+K K P +
Sbjct: 258 LEHLIPVLENVRDAAE-GPCLIHVVTQKGKGYGPAEAAADKYHGVQKFDVITGTQAKAPP 316
Query: 185 ---QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T +F + L D R M GTGL+ F+ FP R FDVGIAEQHAVTF
Sbjct: 317 GPPSYTNVFAQALIAEAERDPRVCAITAAMPSGTGLDKFELAFPDRIFDVGIAEQHAVTF 376
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLAA+G++PFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 377 AAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFD 436
Query: 289 TTFMACLPNMVVM 301
T++A LPN VVM
Sbjct: 437 VTYLASLPNFVVM 449
>gi|384412441|ref|YP_005621806.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|118595489|sp|Q5NM38.2|DXS2_ZYMMO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
synthase 2; Short=DXPS 2
gi|335932815|gb|AEH63355.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 650
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 199/370 (53%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +DAFG HSSTSISA L G A+ L ++
Sbjct: 94 IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAAL----------GFAMASKLSDSDD 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
+++I +G+ A M+YEA+NNA G L+ L RL S+
Sbjct: 144 KAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDNEMSISPPVGALSSYLSRLISSRP 203
Query: 92 FRQLCQEAFSSKDKKQK-FGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
F L ++ K + D ++R + G FFE+LG YY+GPVDGHNL+
Sbjct: 204 FMNLRDIMRGVVNRMPKGLATAARKADEYARGMATG--GTFFEELGFYYVGPVDGHNLDQ 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VL+ V+ D G +L+HV+T K + P + +
Sbjct: 262 LIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPP 320
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D++ M GTGL+ FQ++FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA G KPFC +YS+FLQR +DQ+ HDV +Q LPVRFA+DRAGLVGADG TH G+FD F
Sbjct: 381 LAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAF 440
Query: 292 MACLPNMVVM 301
M LPNMVVM
Sbjct: 441 MVNLPNMVVM 450
>gi|397675987|ref|YP_006517525.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
mobilis ATCC 29191]
gi|395396676|gb|AFN56003.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
mobilis ATCC 29191]
Length = 649
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 199/370 (53%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +DAFG HSSTSISA L G A+ L ++
Sbjct: 94 IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAAL----------GFAMASKLSDSDD 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
+++I +G+ A M+YEA+NNA G L+ L RL S+
Sbjct: 144 KAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDNEMSISPPVGALSSYLSRLISSRP 203
Query: 92 FRQLCQEAFSSKDKKQK-FGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
F L ++ K + D ++R + G FFE+LG YY+GPVDGHNL+
Sbjct: 204 FMNLRDIMRGVVNRMPKGLATAARKADEYARGMATG--GTFFEELGFYYVGPVDGHNLDQ 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VL+ V+ D G +L+HV+T K + P + +
Sbjct: 262 LIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPP 320
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D++ M GTGL+ FQ++FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA G KPFC +YS+FLQR +DQ+ HDV +Q LPVRFA+DRAGLVGADG TH G+FD F
Sbjct: 381 LAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDIAF 440
Query: 292 MACLPNMVVM 301
M LPNMVVM
Sbjct: 441 MVNLPNMVVM 450
>gi|56552130|ref|YP_162969.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
mobilis ZM4]
gi|260752342|ref|YP_003225235.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|81354958|sp|Q5NN52.1|DXS1_ZYMMO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
synthase 1; Short=DXPS 1
gi|56543704|gb|AAV89858.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
mobilis ZM4]
gi|258551705|gb|ACV74651.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 649
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 199/370 (53%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +DAFG HSSTSISA L G A+ L ++
Sbjct: 94 IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAAL----------GFAMASKLSDSDD 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
+++I +G+ A M+YEA+NNA G L+ L RL S+
Sbjct: 144 KAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDNEMSISPPVGALSSYLSRLISSRP 203
Query: 92 FRQLCQEAFSSKDKKQK-FGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
F L ++ K + D ++R + G FFE+LG YY+GPVDGHNL+
Sbjct: 204 FMNLRDIMRGVVNRMPKGLATAARKADEYARGMATG--GTFFEELGFYYVGPVDGHNLDQ 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VL+ V+ D G +L+HV+T K + P + +
Sbjct: 262 LIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPP 320
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D++ M GTGL+ FQ++FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA G KPFC +YS+FLQR +DQ+ HDV +Q LPVRFA+DRAGLVGADG TH G+FD F
Sbjct: 381 LAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAF 440
Query: 292 MACLPNMVVM 301
M LPNMVVM
Sbjct: 441 MVNLPNMVVM 450
>gi|393719494|ref|ZP_10339421.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas echinoides
ATCC 14820]
Length = 641
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 157/373 (42%), Positives = 198/373 (53%), Gaps = 88/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISA L G AV + GK
Sbjct: 94 IRTLRMGGGLSGFTKRSESEYDPFGAAHSSTSISASL----------GFAVANKIAGKPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L R+ S+ +
Sbjct: 144 KGIAVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDNDMSIAPPVGGLSAYLSRIVSSRE 203
Query: 92 F---RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
F R L ++ K G M + + F+R + G FE+LG YY+GP+DGHNL
Sbjct: 204 FLGFRDLARKLAKRLPKPIATG--MRKTEEFARGMAMG--GTLFEELGFYYVGPIDGHNL 259
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR-------------------- 188
+ L VL+ V+ + G +L+HV+T+K K P + +
Sbjct: 260 DQLIPVLENVRDAEE-GPILVHVVTKKGKGYAPAEAAADKYHGVQKFDVITGAQAKAPPG 318
Query: 189 --------------------LFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
L C I M GTGL+ F K P R FDVGIAEQHAVTF
Sbjct: 319 PPQYQNVFGAQLSKEAETDPLICAIT-AAMPSGTGLDGFSKAHPERFFDVGIAEQHAVTF 377
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLAA+G++PFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 378 AAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVCIQNLPVRFAIDRAGLVGADGATHAGSFD 437
Query: 289 TTFMACLPNMVVM 301
T+MA LPNMVVM
Sbjct: 438 VTYMASLPNMVVM 450
>gi|429768590|ref|ZP_19300736.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas diminuta
470-4]
gi|429189010|gb|EKY29868.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas diminuta
470-4]
Length = 636
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/369 (40%), Positives = 192/369 (52%), Gaps = 79/369 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG H+STSISA L G A RD G NN
Sbjct: 91 IRTLRQGGGLSGFTKRSESEYDPFGAAHASTSISAAL----------GFAAARDAKGGNN 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--VLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGG 111
V++VI +G+ A M+YEA+NNA + + L+ N S+ KQ GG
Sbjct: 141 RVVAVIGDGSMSAGMAYEAMNNAAEATSGQLMVILNDNDMSIAPPVGGMSAYLAKQVSGG 200
Query: 112 QMHEI--------DAFSREIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDL 151
I D R +R FE+LG YY+GP+DGH++E+L
Sbjct: 201 TYQNIRKVGKKFVDHMPRPFRDAARKAEEYARGMIVGGTLFEELGFYYVGPIDGHDMENL 260
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL---------------------- 189
+LK AI D VL+HV+T+K K P + +L
Sbjct: 261 VPILKNAAAITDR-PVLVHVVTQKGKGYAPAESSADKLHAVVKFDVVSGKQAKAISNAPS 319
Query: 190 FCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
+ K+ M GTGL+LF + FP R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTKVFGTELIKHAQADPTVMAVTAAMPSGTGLDLFGQAFPDRTFDVGIAEQHAVTFAAGL 379
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
AA+G+KP CAIYS+FLQR +DQV HDV +Q LPVRFA+DRAGLVGADG TH G+FD +M
Sbjct: 380 AADGMKPVCAIYSTFLQRGYDQVVHDVAIQSLPVRFAMDRAGLVGADGATHAGSFDIGYM 439
Query: 293 ACLPNMVVM 301
LP MV+M
Sbjct: 440 GALPGMVLM 448
>gi|384411041|ref|YP_005620406.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|335931415|gb|AEH61955.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 649
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 199/370 (53%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +DAFG HSSTSISA L G A+ L ++
Sbjct: 94 IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAAL----------GFAMASKLSDSDD 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
+++I +G+ A M+YEA+NNA G L+ L RL S+
Sbjct: 144 KAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDNEMSISPPVGALSSYLSRLISSRP 203
Query: 92 FRQLCQEAFSSKDKKQK-FGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
F L ++ K + D ++R + G FFE+LG YY+GPVDGHNL+
Sbjct: 204 FMNLRDIMRGVVNRMPKGLATAARKADEYARGMATG--GTFFEELGFYYVGPVDGHNLDQ 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VL+ V+ D G +L+HV+T K + P + +
Sbjct: 262 LIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPP 320
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D++ M GTGL+ FQ++FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA G KPFC +YS+FLQR +DQ+ HDV +Q LPVRFA+DRAGLVGADG TH G+FD F
Sbjct: 381 LAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAF 440
Query: 292 MACLPNMVVM 301
M LPNMVVM
Sbjct: 441 MVNLPNMVVM 450
>gi|405378915|ref|ZP_11032824.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF142]
gi|397324517|gb|EJJ28873.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF142]
Length = 638
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/368 (42%), Positives = 204/368 (55%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV D+ +
Sbjct: 94 IRTLRQENGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAADIDKTDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 RVIAVIGDGALSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ + G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRDNAN-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGTQAKVKPNAPSY 322
Query: 187 TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + L D+R+ G GTGL+ F + FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TNVFAETLVQEATLDDRVVGITAAMPTGTGLDKFAEIFPSRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDT F+A
Sbjct: 383 AEGFKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLA 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>gi|406706618|ref|YP_006756971.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
HIMB5]
gi|406652394|gb|AFS47794.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
HIMB5]
Length = 637
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/378 (40%), Positives = 198/378 (52%), Gaps = 97/378 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ G+ E+ +D FG HSSTSISAGL G+A L KN+
Sbjct: 92 IRTLRQGGGISGFTKRTESEYDPFGAAHSSTSISAGL----------GIAEANKLSNKND 141
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
VI+VI +GA A M+YEA+NNAG ++ L ++ S
Sbjct: 142 EVIAVIGDGAISAGMAYEAMNNAGTSKAKMIVILNDNEMSIAKPVGAMSTYLAKIFSGKI 201
Query: 92 F------RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDG 145
+ +L AFS ++F + + + R G F LG YYIGP+DG
Sbjct: 202 YFSLRETIKLITSAFS-----KRFSAKAGKAEDLFRSAVTG--GTLFHSLGFYYIGPIDG 254
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEK---------------------------- 177
H+L L +LK VK G +LIH+ T+K K
Sbjct: 255 HDLTTLVPILKNVKQSKHQGPILIHIKTQKGKGYSFAEKANDHYHGVSKFNVGTGEQVKA 314
Query: 178 -AMLPLKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQ 223
A P T++F K L D++ M GGTGL++F K FP R +DVGIAEQ
Sbjct: 315 SASAP---SYTKVFAKTLIEHAKKDSKIVAVTAAMPGGTGLDVFGKEFPSRMYDVGIAEQ 371
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
HAVTFAAGLA E KP+ AIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADGPTH
Sbjct: 372 HAVTFAAGLATENYKPYAAIYSTFLQRAYDQIVHDVAIQSLPVRFAIDRAGLVGADGPTH 431
Query: 284 CGAFDTTFMACLPNMVVM 301
G+FD T+++ LPN ++M
Sbjct: 432 AGSFDITYLSTLPNFIIM 449
>gi|407775204|ref|ZP_11122499.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassospira
profundimaris WP0211]
gi|407281629|gb|EKF07190.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassospira
profundimaris WP0211]
Length = 639
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/371 (40%), Positives = 197/371 (53%), Gaps = 82/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG-KN 52
+RTIRQ GL E+ +D FG GHSSTSISAGL GMAV L K
Sbjct: 94 IRTIRQGGGLSGFTKRSESEYDPFGAGHSSTSISAGL----------GMAVANQLSDDKR 143
Query: 53 NHVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNP 90
+VI+VI +G+ A M+YEA+NNA G ++ L RL S
Sbjct: 144 KNVIAVIGDGSMSAGMAYEAMNNAAATDQRLIVILNDNDMSIAPPVGSMSGYLSRLISGK 203
Query: 91 QFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
++ L A +K ++ +++ ++R + G FE++G +Y+GP+DGHN++
Sbjct: 204 GYQGLRNAAKGLTKHLPRQIEEAARKLEEYTRGMVTG--GTLFEEMGFFYVGPIDGHNMD 261
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP---------------------------- 181
L VLK V+ G +LIH +T+K K P
Sbjct: 262 HLLPVLKNVRDADVDGPILIHAVTQKGKGYGPAENAADKYHGVAKFDVVTGKQAKPTPNA 321
Query: 182 -----------LKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+KL + + M GTG+N+F HFP R FDVGIAEQHAVTFAA
Sbjct: 322 PSYTKVYGETLVKLAEKDEKVTAITAAMPSGTGVNIFADHFPDRAFDVGIAEQHAVTFAA 381
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPFC +YS+FLQR +DQV HDV +Q LPVRFA+DRAGLVGADG TH GA+D
Sbjct: 382 GMACEGYKPFCTLYSTFLQRGYDQVVHDVAIQNLPVRFAMDRAGLVGADGATHAGAYDIA 441
Query: 291 FMACLPNMVVM 301
++ CLPN V+M
Sbjct: 442 YLGCLPNFVLM 452
>gi|114326885|ref|YP_744042.1| 1-deoxy-D-xylulose-5-phosphate synthase [Granulibacter bethesdensis
CGDNIH1]
gi|114315059|gb|ABI61119.1| 1-deoxy-D-xylulose 5-phosphate synthase [Granulibacter bethesdensis
CGDNIH1]
Length = 674
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 154/387 (39%), Positives = 197/387 (50%), Gaps = 100/387 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLL---- 49
+RT+R GL E+ +D FG GHSSTSISAGL GMAV RDL
Sbjct: 105 IRTLRMGGGLSGFTKRSESEYDPFGAGHSSTSISAGL----------GMAVARDLRRAAG 154
Query: 50 ---GKNNHVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF-------------- 92
HVI+VI +GA A M YEA+NNAG L L + ++
Sbjct: 155 EVGAGPEHVIAVIGDGAMSAGMVYEAMNNAGSLKSRLVVILNDNDMSIAPPVGAMSAYLS 214
Query: 93 RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR------------ACFFEDLGLYYI 140
R L +F + + G+M F R IE +R FE+LG YY+
Sbjct: 215 RLLSSRSFLNL---RDLAGKMAR--HFPRGIERTARRAEEYARGILTGGTLFEELGFYYV 269
Query: 141 GPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR------------ 188
GP+DGHNL+ L VL+ V+ + G +L+H IT K P + +
Sbjct: 270 GPIDGHNLDHLLPVLRNVRDAEETGPILVHAITRKGHGYAPAEASADKYHAVSRFNVVTG 329
Query: 189 ----------------LFCKI-----------------LDNRMGGGTGLNLFQKHFPIRC 215
+ K+ ++ M GTGL+ F+K FP RC
Sbjct: 330 EQIKPAPVPGAKPAPPTYTKVFAEALIAAAEENPRVVAINAAMPSGTGLDAFEKRFPDRC 389
Query: 216 FDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGL 275
FDVGIAEQHAVTFAAGLA EG+ PFCA+YS+FLQR +DQ+ HDV +Q LPVRFAIDRAGL
Sbjct: 390 FDVGIAEQHAVTFAAGLAVEGMVPFCALYSTFLQRGYDQLVHDVAIQHLPVRFAIDRAGL 449
Query: 276 VGADGPTHCGAFDTTFMACLPNMVVMK 302
VGADG TH G+FD ++ CLP M++M
Sbjct: 450 VGADGATHAGSFDMAYLGCLPGMMIMS 476
>gi|149915301|ref|ZP_01903829.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. AzwK-3b]
gi|149811022|gb|EDM70861.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. AzwK-3b]
Length = 642
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 161/372 (43%), Positives = 201/372 (54%), Gaps = 82/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G AV RDL G +
Sbjct: 94 IRTLRQRDGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGGASE 143
Query: 54 ----HVISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQK 108
I+VI +GA A M++EA+N+AG L K L L+ N A SS +
Sbjct: 144 TGHGDAIAVIGDGAMSAGMAFEAMNHAGHLKKRLIVILNDNEMSIAPPVGALSSYLSRLY 203
Query: 109 FGGQMHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNL 148
G E A ++ + G+R FE+LG YIGP+DGH++
Sbjct: 204 AGEPFQEFKAAAKGAVSLLPPPFQEGARRAKDMLKGLTVGGTLFEELGFSYIGPIDGHDM 263
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
+ L VL+ V+A G LIHVIT K K P + ++
Sbjct: 264 DQLLPVLRTVRARAT-GPTLIHVITRKGKGYGPAEARRDGGHATAKFDLVTGEQKKAPSN 322
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
TR+F L D+R M GTGL+LF+K +P RCFDVGIAEQHAVTFA
Sbjct: 323 APSYTRVFADALLEHAAQDDRICAITAAMPEGTGLDLFEKRYPSRCFDVGIAEQHAVTFA 382
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADGPTH GAFD
Sbjct: 383 AGLAAGGMKPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGPTHAGAFDV 442
Query: 290 TFMACLPNMVVM 301
++A LP VM
Sbjct: 443 AYLANLPGFTVM 454
>gi|344923787|ref|ZP_08777248.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Odyssella
thessalonicensis L13]
Length = 637
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 204/372 (54%), Gaps = 85/372 (22%)
Query: 1 MRTIRQTCG-------LENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +RQ G E+++D FG H+ TSISA L G AV ++ K++
Sbjct: 91 MSKLRQKGGPSGFTKRSESIYDPFGAAHAGTSISAAL----------GFAVASEMNKKHH 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL-----------------------KRLHSNP 90
H I+VI +G+ + M+YEA+NNAG L L + + S P
Sbjct: 141 HSIAVIGDGSMSSGMAYEAMNNAGALKSRLVVILNDNDMSIAPPVGAMSHYFSRLISSRP 200
Query: 91 --QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
R + +E S K + + ++ ++R I AG +FE++G +Y+GP+DGH+L
Sbjct: 201 YQSLRSMAKEVASHLPKPLETAAR--RVEEYARGIVAG--GTWFEEMGFFYVGPIDGHDL 256
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL-----------------QQ----- 186
+ L VL+ ++ + G VLIH++T+K + P + QQ
Sbjct: 257 DHLIPVLENIRDRKEDGPVLIHIVTQKGRGYAPAEAAADKYHGVVKFDVATGQQQKTEVS 316
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T++F + L D++ M GTGL+LF + FP RCFDVGIAEQHAVTFA
Sbjct: 317 SPSYTKVFAETLTELARQDDKIVAITAAMPTGTGLDLFAREFPGRCFDVGIAEQHAVTFA 376
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA +GLKPF AIYS+FLQR FDQV HDV LQ LPVRFA+DRAG VGADG TH G++D
Sbjct: 377 AGLACDGLKPFTAIYSTFLQRGFDQVVHDVMLQNLPVRFALDRAGFVGADGATHAGSYDL 436
Query: 290 TFMACLPNMVVM 301
F+ CLP M++M
Sbjct: 437 AFLGCLPQMIIM 448
>gi|87198187|ref|YP_495444.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium
aromaticivorans DSM 12444]
gi|118595595|sp|Q2GC13.1|DXS_NOVAD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|87133868|gb|ABD24610.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium
aromaticivorans DSM 12444]
Length = 640
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 157/373 (42%), Positives = 197/373 (52%), Gaps = 88/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G A+ L G+
Sbjct: 94 IRTLRQAGGLSGFTKRSESEYDPFGTAHSSTSISAAL----------GFAIANKLSGRLG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L RL S+
Sbjct: 144 KGIAVIGDGAMSAGMAYEAMNNAEAAGNRLIVILNDNDMSIAPPVGGLSAYLARLVSSGP 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
F L A + +K +HE D F+R + G FE+LG YY+GP+DGHN
Sbjct: 204 FLGLRDIA---RRLSRKLPRPLHEAARKTDEFARGMAMGG--TLFEELGFYYVGPIDGHN 258
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR------------------- 188
++ L VL+ V+ + G LIHV+T+K K P + +
Sbjct: 259 IDQLIPVLENVRDAAE-GPCLIHVVTQKGKGYAPAEAAADKYHGVQKFDVITGEQVKAKA 317
Query: 189 -----------LFCKILDN---------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
K+ D M GTG++ F K P R FDVGIAEQHAVTF
Sbjct: 318 AAPAYQNVFGETLAKLADADPTICAITAAMPSGTGVDKFAKAHPDRTFDVGIAEQHAVTF 377
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLAAEG++PFCAIYS+FLQR FDQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 378 AAGLAAEGMRPFCAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFD 437
Query: 289 TTFMACLPNMVVM 301
T++A LPN+VVM
Sbjct: 438 VTYLATLPNLVVM 450
>gi|222085096|ref|YP_002543626.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium radiobacter
K84]
gi|398382394|ref|ZP_10540482.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. AP16]
gi|254782056|sp|B9JAL7.1|DXS_AGRRK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|221722544|gb|ACM25700.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium radiobacter
K84]
gi|397717559|gb|EJK78175.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. AP16]
Length = 638
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ G+ E+ +D FG HSSTSISAGL GMAV DL +
Sbjct: 94 IRTLRQEGGISGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAADLDKTDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSS---------- 102
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+
Sbjct: 144 RVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 103 ----KDKKQKFGGQM-HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+D +K + +D A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDLGKKLTAYLGKNVDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRDNAQ-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKVKPNAPSY 322
Query: 187 TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F L D+++ G GTGL+ Q+ FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFADALVQEATFDDKIVGITAAMPSGTGLDKLQEVFPKRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDTTF+A
Sbjct: 383 AEGFKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTFLA 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>gi|409436325|ref|ZP_11263509.1| 1-deoxyxylulose-5-phosphate synthase,thiamine-requiring,
FAD-requiring [Rhizobium mesoamericanum STM3625]
gi|408751882|emb|CCM74661.1| 1-deoxyxylulose-5-phosphate synthase,thiamine-requiring,
FAD-requiring [Rhizobium mesoamericanum STM3625]
Length = 640
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 201/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L +
Sbjct: 94 IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVASELDKTDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 RVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ +D A +R +E + FE++G Y+IGP+DGH+ E L
Sbjct: 204 YMGFRDFGKKLTAYLGKNVDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFEHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ + G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRDNAN-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKVKPNAPSY 322
Query: 184 --------LQQTRLFCKI--LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+Q+ L KI + M GTGL+ FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALVQEAELDDKIVGITAAMPNGTGLDKLASVFPSRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDTTF+A
Sbjct: 383 AEGFKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTFLA 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>gi|399039198|ref|ZP_10734847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF122]
gi|398062884|gb|EJL54649.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF122]
Length = 638
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 201/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L +
Sbjct: 94 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVASELDKTDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 RVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ +D A +R +E + FE++G Y+IGP+DGH+ E L
Sbjct: 204 YMGFRDFGKKLTAYLGKNVDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFEHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ + G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRDNAE-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKVKPNAPSY 322
Query: 184 --------LQQTRLFCKI--LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+Q+ L KI + M GTGL+ FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALVQEAELDDKIVGITAAMPNGTGLDKLASVFPSRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDTTF+A
Sbjct: 383 AEGFKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTFLA 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>gi|408537469|gb|AFU75320.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Aquilaria sinensis]
Length = 712
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 145/361 (40%), Positives = 192/361 (53%), Gaps = 83/361 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
EN +D FG GH +SISAGL GMA RD+ GK V++VI T+A Y
Sbjct: 175 ENEYDPFGAGHGCSSISAGL----------GMAAARDIKGKRERVVTVINNDTTMAGQVY 224
Query: 71 EAINNAG------------------------------VLNKALKRLHSNPQFRQLCQEAF 100
EA++NAG +L+ L ++ S+ FR + A
Sbjct: 225 EAMSNAGYLDCNMVVILNDSRHSLHPKIEEGPKTSINMLSSTLSKIQSSKSFRTFREVA- 283
Query: 101 SSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLK 156
K ++ G MHE +D ++R + + FE+LGLYYIGPVDGHN+EDL VL+
Sbjct: 284 --KGVTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLVGVLQ 341
Query: 157 QVKAIPDPGAVLIHVITEK-------EKAMLPLKLQQTRLFCKILDNR------------ 197
+V ++ G VL+HVITE+ +K ++ + + C L
Sbjct: 342 EVASLDSTGPVLVHVITEENEASNIDQKKTQGMQQEGSTSSCSFLSTDHCRTYSDCFVEA 401
Query: 198 -----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPF 240
MG L+L+Q+ FP + FDVG+AEQHAVTFAAGL+ GLKPF
Sbjct: 402 LLMEAVRDKDIVVVHAGMGLEPSLHLYQERFPDKFFDVGMAEQHAVTFAAGLSRGGLKPF 461
Query: 241 CAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVV 300
C I S+FLQR +DQV HDVD Q +PVRF + AGLVG+DGP GAFD TFM+CLPNM+V
Sbjct: 462 CIIPSTFLQRAYDQVVHDVDRQMIPVRFVVTGAGLVGSDGPLQSGAFDITFMSCLPNMIV 521
Query: 301 M 301
M
Sbjct: 522 M 522
>gi|440225750|ref|YP_007332841.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium tropici CIAT
899]
gi|440037261|gb|AGB70295.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium tropici CIAT
899]
Length = 638
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L +
Sbjct: 94 IRTLRQENGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAAELDNADR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 RVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ++D A +R +E + FE++G Y+IGP+DGH+ E L
Sbjct: 204 YMGFRDFGKKLTAYLGKKVDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFEHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRDNAQ-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQTKVKPNAPSY 322
Query: 184 --------LQQTRLFCKI--LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+Q+ L KI + M GTGL+ Q+ FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFADALVQEATLDDKIVGITAAMPNGTGLDKLQEIFPKRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDT F+A
Sbjct: 383 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLA 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>gi|119383154|ref|YP_914210.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paracoccus denitrificans
PD1222]
gi|119372921|gb|ABL68514.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paracoccus denitrificans
PD1222]
Length = 640
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 158/368 (42%), Positives = 198/368 (53%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG GHSSTSISA L G A+ R+L G
Sbjct: 98 IRTLRMEGGLSGFTKRSESPYDPFGAGHSSTSISAAL----------GFAMARELGGDPG 147
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL-KRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
I+VI +GA A M++EA+NNAG L K L L+ N A S + G
Sbjct: 148 DAIAVIGDGAMSAGMAFEALNNAGDLGKRLFVVLNDNEMSIAPPTGALSRYLTRLYAEGP 207
Query: 113 MHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDLA 152
++ A ++ ++ G+R FE+LG YIGPVDGH+L+ L
Sbjct: 208 FQDLKAVAKGAVGFLPPTLQEGARRAKEMLKGMTVGGTLFEELGFSYIGPVDGHDLDQLL 267
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
+L+ VKA G VL+HV+T K K P +
Sbjct: 268 PLLRTVKARAT-GPVLLHVVTRKGKGYGPAERAADKGHATAKFDVETGAQAKAKSNAPSY 326
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + L D R M GTGLNL + FP RCFDVGIAEQHAVTF+AGLA
Sbjct: 327 TSVFARALVDQASRDARIVAVTAAMPDGTGLNLMAERFPRRCFDVGIAEQHAVTFSAGLA 386
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH GA+D F+A
Sbjct: 387 AGGMKPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAYDVAFLA 446
Query: 294 CLPNMVVM 301
LP MVVM
Sbjct: 447 NLPGMVVM 454
>gi|357977645|ref|ZP_09141616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. KC8]
Length = 641
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 157/373 (42%), Positives = 199/373 (53%), Gaps = 88/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G AV L G
Sbjct: 94 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GFAVANKLAGDPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L R+ S+
Sbjct: 144 KAIAVIGDGAMSAGMAYEAMNNAEQAGNRLIVILNDNDMSIAPPVGGLSAYLARMVSSRP 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
F L A K +K +H+ D F+R + G FE+LG YY+GP+DGHN
Sbjct: 204 FLSLRDLA---KRLARKLPRPLHDAARKTDEFARGMTMG--GTLFEELGFYYVGPIDGHN 258
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------------- 184
L+ L +L+ V+ + G +LIHV+T+K K P +
Sbjct: 259 LDHLIPILENVRDAGE-GPILIHVVTQKGKGYAPAEAAADKYHGVQKFDVVTGAQAKAPP 317
Query: 185 ---QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T +F + L D++ M GTGL+ F FP R FDVGIAEQHAVTF
Sbjct: 318 GPPSYTGVFAQALIAEATRDDKVCAITAAMPSGTGLDKFATLFPDRSFDVGIAEQHAVTF 377
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGL+A+G +PFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 378 AAGLSAQGYRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFD 437
Query: 289 TTFMACLPNMVVM 301
T++A LPN VVM
Sbjct: 438 ITYLASLPNFVVM 450
>gi|242094640|ref|XP_002437810.1| hypothetical protein SORBIDRAFT_10g002960 [Sorghum bicolor]
gi|241916033|gb|EER89177.1| hypothetical protein SORBIDRAFT_10g002960 [Sorghum bicolor]
Length = 722
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 153/381 (40%), Positives = 198/381 (51%), Gaps = 94/381 (24%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI+Q GL E+ +D FG GH S+SAGL GMAV RD+ G+ N +
Sbjct: 166 TIKQKNGLSGFTSRFESEYDPFGAGHGCNSLSAGL----------GMAVARDINGRKNRI 215
Query: 56 ISVIVEGATIARMSYEAINNAGVLNK------------------------------ALKR 85
++VI T+A YEA+ +AG L+ AL +
Sbjct: 216 VTVISNWTTMAGQVYEAMGHAGFLDSNMVVILNDSCHTLLPKADGRPKMSVNAFSSALSK 275
Query: 86 LHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIG 141
+ S+ FR+ + A K + FG MHE +D ++R + A FE+LGLYYIG
Sbjct: 276 IQSSKGFRRFREAA---KGLAKWFGKGMHEFAAKVDEYARGMIGPHGATLFEELGLYYIG 332
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEK------------------------ 177
P+DG N++DL VLK+V ++ G VL+HVIT E
Sbjct: 333 PIDGRNIDDLICVLKEVASLDSTGPVLVHVITGTESDTDGNIRSEITASEEGPSNSSNDL 392
Query: 178 -AMLPLKLQQTRLFCKIL--------DNR-------MGGGTGLNLFQKHFPIRCFDVGIA 221
L L +T C + D R MG L LFQ FP R FD+GIA
Sbjct: 393 LKFLETGLSRTYNDCFVEALTAEAENDKRIVVVHGGMGMDRSLRLFQSRFPDRFFDLGIA 452
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTF+AGLA GLKPFC I S+FLQR +DQ+ DVD+QK+PVRFAI AGLVG++GP
Sbjct: 453 EQHAVTFSAGLACGGLKPFCIIPSTFLQRAYDQIVEDVDMQKIPVRFAITNAGLVGSEGP 512
Query: 282 THCGAFDTTFMACLPNMVVMK 302
T+ G FD TFM+CLPNM+VM
Sbjct: 513 TNSGPFDITFMSCLPNMIVMS 533
>gi|418936010|ref|ZP_13489753.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. PDO1-076]
gi|375057273|gb|EHS53454.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. PDO1-076]
Length = 639
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 200/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV DL +
Sbjct: 94 IRTLRQEDGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVAADLSQTDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSS---------- 102
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+
Sbjct: 144 KVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 103 ----KDKKQKFGGQM-HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+D +K + ID A +R +E + FE++G Y+IGP+DGH+ E L
Sbjct: 204 YMGIRDIGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFEHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRD-NQQGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGTQAKAKPNAPSY 322
Query: 184 --------LQQTRLFCKI--LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+Q+ L KI + M GTGL+ Q+ FP R FDVGIAEQHAVTFAAGLA
Sbjct: 323 TAVFGDALVQEATLDEKIVGITAAMPSGTGLDKLQELFPTRTFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
+EG +PFCA+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDT F+A
Sbjct: 383 SEGFRPFCALYSTFLQRGYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTGFLA 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 SLPGFVVM 450
>gi|209543457|ref|YP_002275686.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531134|gb|ACI51071.1| deoxyxylulose-5-phosphate synthase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 704
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 152/379 (40%), Positives = 200/379 (52%), Gaps = 90/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L +++
Sbjct: 134 IRTLRQPGGLSGFTRRCESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEHD 183
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+V++VI +G+ A M+YEA+NNA G ++
Sbjct: 184 PAYRERNVVAVIGDGSISAGMAYEAMNNASVAGPGAGRLIVVLNDNEMSIAPPVGAMSNY 243
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
L RL S+ QF L A ++ ++ + D ++R + G FE+LG YY+G
Sbjct: 244 LSRLMSSRQFLGLRDLAGKVARRLPERLERTAKKADEYARGMITG--GTLFEELGFYYVG 301
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------------------------- 175
PVDGH+L L +L+ ++ D G +L+H++TEK
Sbjct: 302 PVDGHDLNQLVPILRNLRDADDKGPILLHILTEKGRGYRPAESAGDKYHAVAKFNVVTGE 361
Query: 176 EKAMLPLKLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAE 222
+K P T +F + L R M GTGL+ F + P R FDVGIAE
Sbjct: 362 QKKAPPGPPSYTSVFSRELVRRAKQDDTLVAVTAAMPSGTGLDAFARACPDRFFDVGIAE 421
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGL+PFCAIYS+FLQR +DQV HDV LQ LPVRFAIDRAGLVGADG T
Sbjct: 422 QHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQNLPVRFAIDRAGLVGADGAT 481
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GAFD ++ CLP M +M
Sbjct: 482 HAGAFDINYLGCLPGMTIM 500
>gi|162147644|ref|YP_001602105.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209542273|ref|YP_002274502.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786221|emb|CAP55803.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209529950|gb|ACI49887.1| deoxyxylulose-5-phosphate synthase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 667
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 152/379 (40%), Positives = 200/379 (52%), Gaps = 90/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L +++
Sbjct: 107 IRTLRQPGGLSGFTRRCESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEHD 156
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+V++VI +G+ A M+YEA+NNA G ++
Sbjct: 157 PAYRERNVVAVIGDGSISAGMAYEAMNNASVAGPGAGRLIVVLNDNEMSIAPPVGAMSNY 216
Query: 83 LKRLHSNPQFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
L RL S+ QF L A ++ ++ + D ++R + G FE+LG YY+G
Sbjct: 217 LSRLMSSRQFLGLRDLAGKVARRLPERLERTAKKADEYARGMITGG--TLFEELGFYYVG 274
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------------------------- 175
PVDGH+L L +L+ ++ D G +L+H++TEK
Sbjct: 275 PVDGHDLNQLVPILRNLRDADDKGPILLHILTEKGRGYRPAESAGDKYHAVAKFNVVTGE 334
Query: 176 EKAMLPLKLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAE 222
+K P T +F + L R M GTGL+ F + P R FDVGIAE
Sbjct: 335 QKKAPPGPPSYTSVFSRELVRRAKQDDTIVAVTAAMPSGTGLDAFARACPDRFFDVGIAE 394
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGL+PFCAIYS+FLQR +DQV HDV LQ LPVRFAIDRAGLVGADG T
Sbjct: 395 QHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQNLPVRFAIDRAGLVGADGAT 454
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GAFD ++ CLP M +M
Sbjct: 455 HAGAFDINYLGCLPGMTIM 473
>gi|398350482|ref|YP_006395946.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium fredii USDA
257]
gi|390125808|gb|AFL49189.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Sinorhizobium fredii
USDA 257]
Length = 645
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 203/368 (55%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV DL GK+
Sbjct: 99 IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAADLDGKSR 148
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSS---------- 102
+V++VI +GA A M+YEA+NNAG L+ + + L+ N A S+
Sbjct: 149 NVVAVIGDGALSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 208
Query: 103 ----KDKKQKFGGQMHE-ID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
++ +K + + +D A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 209 YMGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGGTLFEEMGFYHIGPIDGHSFDHLL 268
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV+T+K K P +
Sbjct: 269 PVLRNVRD-NRRGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPAY 327
Query: 184 --------LQQTRLFCKI--LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+Q+ L KI + M GTGL+ F P RCFDVGIAEQHAVTFAAGLA
Sbjct: 328 TSVFADALVQEASLDDKIVAITAAMPSGTGLDRFAAVHPSRCFDVGIAEQHAVTFAAGLA 387
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDTT++A
Sbjct: 388 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYLA 447
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 448 SLPGFVVM 455
>gi|390167485|ref|ZP_10219472.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium indicum B90A]
gi|389589893|gb|EIM67901.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium indicum B90A]
Length = 641
Score = 243 bits (620), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 197/372 (52%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G AV + GK
Sbjct: 94 IRTLRQGGGLSGFTKRAESEYDPFGAAHSSTSISAAL----------GFAVANRMQGKPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +G+ A M+YEA+NNA G L+ L RL S+ +
Sbjct: 144 KGIAVIGDGSMSAGMAYEAMNNAREAGNRLIVILNDNDMSIAPPVGGLSAYLARLVSSRE 203
Query: 92 F---RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
F R L + ++ + + D F+R + G FE+LG YY+GP+DGHNL
Sbjct: 204 FLGLRDLAKRL--ARRLPRPLHNAARKTDEFARGMAMGG--TLFEELGFYYVGPIDGHNL 259
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------------------ 184
+ L VL+ V+ + G L+HV+T+K K P +
Sbjct: 260 DQLIPVLENVRDAAE-GPCLVHVVTQKGKGYAPAEAAADKYHGVQKFDVITGAQAKAPPG 318
Query: 185 --QQTRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F K L M GTGL+ F FP R FDVGIAEQHAVTFA
Sbjct: 319 PPSYTGVFAKALIAEAERDPAICAITAAMPSGTGLDKFGAAFPDRTFDVGIAEQHAVTFA 378
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA+G++PFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 379 AGLAAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDV 438
Query: 290 TFMACLPNMVVM 301
T++A LPN VVM
Sbjct: 439 TYLASLPNFVVM 450
>gi|89069937|ref|ZP_01157270.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola granulosus
HTCC2516]
gi|89044491|gb|EAR50619.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola granulosus
HTCC2516]
Length = 637
Score = 243 bits (620), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 158/368 (42%), Positives = 194/368 (52%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G A RDL G
Sbjct: 94 IRTLRQKDGLSGFCKRSESPYDPFGAAHSSTSISAAL----------GFAAARDLGGDAG 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
I+VI +GA A M+YEA+NNAG L K L L+ N A SS + G
Sbjct: 144 DAIAVIGDGAMSAGMAYEAMNNAGHLGKRLIVILNDNEMSIAPPVGAMSSYLSRLYAGAP 203
Query: 113 MHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDLA 152
E+ A ++ + G++ FE+LG Y+GP+DGH+LE L
Sbjct: 204 FQELKAAAKGAVSFLPPPFQQGAKRAKEMLKHLAVGGTLFEELGFSYVGPIDGHDLEQLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------------------LQQ 186
VL+ VKA D G +LIH IT K K P +
Sbjct: 264 AVLRTVKARAD-GPILIHAITRKGKGYAPAEGAADKGHGVSKFDVITGEQKKAKSNAPSY 322
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F K L D++ M GTGL F + + RCFDVGIAEQHAVTFAAG+A
Sbjct: 323 TSVFAKALIAEAARDDKVVAVTAAMPDGTGLKSFMERYASRCFDVGIAEQHAVTFAAGMA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A G+KPFCAIYS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH GAFD ++A
Sbjct: 383 AGGMKPFCAIYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFDVAYLA 442
Query: 294 CLPNMVVM 301
LP VM
Sbjct: 443 NLPGFTVM 450
>gi|294012272|ref|YP_003545732.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium japonicum
UT26S]
gi|292675602|dbj|BAI97120.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium japonicum
UT26S]
Length = 644
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 197/372 (52%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G AV + GK
Sbjct: 97 IRTLRQGGGLSGFTKRAESEYDPFGAAHSSTSISAAL----------GFAVANRMQGKPG 146
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +G+ A M+YEA+NNA G L+ L RL S+ +
Sbjct: 147 KGIAVIGDGSMSAGMAYEAMNNAREAGNRLIVILNDNDMSIAPPVGGLSAYLARLVSSRE 206
Query: 92 F---RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
F R L + ++ + + D F+R + G FE+LG YY+GP+DGHNL
Sbjct: 207 FLGLRDLAKRL--ARRLPRPLHNAARKTDEFARGMAMG--GTLFEELGFYYVGPIDGHNL 262
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------------------ 184
+ L VL+ V+ + G L+HV+T+K K P +
Sbjct: 263 DQLIPVLENVRDAAE-GPCLVHVVTQKGKGYAPAEAAADKYHGVQKFDVITGAQAKAPPG 321
Query: 185 --QQTRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F K L M GTGL+ F FP R FDVGIAEQHAVTFA
Sbjct: 322 PPSYTGVFAKALIAEAERDPAICAITAAMPSGTGLDKFGAAFPDRTFDVGIAEQHAVTFA 381
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA+G++PFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 382 AGLAAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDV 441
Query: 290 TFMACLPNMVVM 301
T++A LPN VVM
Sbjct: 442 TYLASLPNFVVM 453
>gi|16126307|ref|NP_420871.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter crescentus
CB15]
gi|221235086|ref|YP_002517522.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter crescentus
NA1000]
gi|21263543|sp|Q9A6M5.1|DXS_CAUCR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|254782066|sp|B8GXC4.1|DXS_CAUCN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|13423547|gb|AAK24039.1| 1-deoxyxylulose-5-phosphate synthase [Caulobacter crescentus CB15]
gi|220964258|gb|ACL95614.1| 1-deoxy-D-xylulose 5-phosphate synthase [Caulobacter crescentus
NA1000]
Length = 640
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 155/371 (41%), Positives = 200/371 (53%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG H++TSISA L G RD G++N
Sbjct: 92 IRTLRQGGGLSGFTKRAESEYDPFGAAHAATSISAAL----------GFCAARDAKGEDN 141
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
VI+VI +G+ A M+YEA+N A G ++ L L S
Sbjct: 142 SVIAVIGDGSLGAGMAYEAMNAATDTTKRLIVILNDNDMSIAPPVGGMSAYLANLVSGGA 201
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
+R + + K +K M E + E G + FFE+LG YYIGP+DGH+++
Sbjct: 202 YRSVRK---LGKTVVEKLPTPMREAARKAEEYARGMVTGGTFFEELGFYYIGPIDGHDMD 258
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-----------------LQQ------ 186
L VLK KA D VL+H +T+K K P + QQ
Sbjct: 259 ALVSVLKNAKAFGDK-PVLVHCVTQKGKGYAPAEGAADKLHAVVKFDVVTGQQQKAAGGP 317
Query: 187 ---TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T++F + L D++ M GTGL+LF K FP R FDVGIAEQHAVTFAA
Sbjct: 318 PSYTKVFAQELIKQAEKDDKIVAITAAMPSGTGLDLFGKAFPERTFDVGIAEQHAVTFAA 377
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+AA+G+KPF AIYS+FLQR +DQV HDV +Q LPVRFA+DRAGLVGADGPTH G+FD
Sbjct: 378 GMAADGMKPFAAIYSTFLQRGYDQVVHDVAIQGLPVRFAMDRAGLVGADGPTHAGSFDIG 437
Query: 291 FMACLPNMVVM 301
FM LP MV+M
Sbjct: 438 FMGALPGMVLM 448
>gi|332185973|ref|ZP_08387719.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. S17]
gi|332013788|gb|EGI55847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. S17]
Length = 641
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/371 (42%), Positives = 200/371 (53%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RTIRQ GL E+ +D FG HSSTSISA L G AV L G
Sbjct: 94 IRTIRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GFAVANKLAGTPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L R+ S+ +
Sbjct: 144 KGIAVIGDGAMSAGMAYEAMNNAEQAGNRLIVILNDNDMSIAPPVGGLSAYLSRIVSSRE 203
Query: 92 FRQLCQEAFSSKDKK--QKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
F + ++ F K+ + + D F+R + G FE+LG YY+GP+DGHNL+
Sbjct: 204 FLGV-RDVFKKLAKRFPRPIQKAARKTDEFARGMTMG--GTLFEELGFYYVGPIDGHNLD 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR--------------------- 188
L VL+ V+ + G +LIHV+T+K K P + +
Sbjct: 261 HLIPVLENVRDAEE-GPILIHVVTKKGKGYAPAEAAADKYHGVQKFDVITGAQAKAPPGP 319
Query: 189 -----LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+F + L D R M GTGL+ F P R FDVGIAEQHAVTFAA
Sbjct: 320 PAYQNVFGETLSREAESDPRICAITAAMPSGTGLDKFAAAHPDRFFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLAA+G++PFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD T
Sbjct: 380 GLAAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVT 439
Query: 291 FMACLPNMVVM 301
++A LPNMVVM
Sbjct: 440 YLASLPNMVVM 450
>gi|449441938|ref|XP_004138739.1| PREDICTED: 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Cucumis sativus]
gi|449499272|ref|XP_004160772.1| PREDICTED: 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 717
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/364 (39%), Positives = 194/364 (53%), Gaps = 81/364 (22%)
Query: 6 QTCGLENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATI 65
T LE+ D FG H S+SAGL GMAV RD+ GK ++++I +T+
Sbjct: 177 STSRLESEFDPFGAAHGCNSVSAGL----------GMAVARDIKGKRERIVTIINNLSTM 226
Query: 66 ARMSYEAINNAG------------------------------VLNKALKRLHSNPQFRQL 95
YEA++N G L+ L RL S+ FR+
Sbjct: 227 TGQIYEAMSNVGYLDSNMIVILNDSRHSLHPKLDDGSKTSVSALSSTLSRLQSSKSFRKF 286
Query: 96 CQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDL 151
+ A K ++ G MHE +D ++R + S + FE+LGLYYIGPVDGHN+EDL
Sbjct: 287 REAA---KGVTKRIGKGMHELAAKVDQYARGMMGPSGSTLFEELGLYYIGPVDGHNMEDL 343
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL--------FCKILDNRMGGG-- 201
VL++V ++ G VL+HV+TE+ + ++ +L +D+R G
Sbjct: 344 ICVLQEVASLDSMGPVLVHVVTEENYSEGYKRVAGRQLDGLYNIDPLLYGIDSRTYGDCF 403
Query: 202 ------------------------TGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGL 237
+ LF++ FP + FDVG+AEQHAVTFAAGL+ GL
Sbjct: 404 AEALVVEAEKDKSIVTVHAGMQMEPSIQLFRERFPDKFFDVGMAEQHAVTFAAGLSCGGL 463
Query: 238 KPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPN 297
KPFC I S+FLQR +DQV HDVD Q++PVRF I AGLVG+DGPT CGAFD T+M+CLPN
Sbjct: 464 KPFCVIPSAFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGSDGPTQCGAFDITYMSCLPN 523
Query: 298 MVVM 301
M+VM
Sbjct: 524 MIVM 527
>gi|254501855|ref|ZP_05114006.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia alexandrii
DFL-11]
gi|222437926|gb|EEE44605.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia alexandrii
DFL-11]
Length = 619
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/348 (43%), Positives = 188/348 (54%), Gaps = 70/348 (20%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRT+R+ GL E+ +D FG HSSTSISAGL G AV RDL GK+
Sbjct: 86 MRTLRKKDGLSGFTKRSESPYDPFGAAHSSTSISAGL----------GFAVARDLEGKDG 135
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
HV+ VI +GA A M+YE NNAG LN + + L+ N A S
Sbjct: 136 HVVCVIGDGAMTAGMAYEGFNNAGHLNSRMIVILNDNNMSISPPTGALSDHLNT------ 189
Query: 113 MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVI 172
+ + D RE FFE++G Y GPVDGH++ L L+ +K G V++H I
Sbjct: 190 LAQSDTVQRE------RSFFENMGFAYHGPVDGHDIPTLLATLRHLKE-EGTGPVVLHAI 242
Query: 173 TEK--------------------------EKAMLPLKLQQTRLFCKIL------DNR--- 197
T K + +P T++F L D+R
Sbjct: 243 TRKGAGYVHAEAASDKYHGVSKFDVPSGKQSKSVPKAPSYTKVFANALIEEARQDDRVIA 302
Query: 198 ----MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFD 253
M GTG++LF K +P R FDVGIAEQHAVTFA GLAA G++PFCAIYS+FLQR +D
Sbjct: 303 ITAAMAEGTGVDLFGKQYPDRSFDVGIAEQHAVTFAGGLAAGGMRPFCAIYSTFLQRGYD 362
Query: 254 QVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
QV HD+ LQ LPVRFAIDRAGLVGADG TH GAFD F+A LPN VM
Sbjct: 363 QVVHDIALQNLPVRFAIDRAGLVGADGATHAGAFDIGFLANLPNFTVM 410
>gi|296282072|ref|ZP_06860070.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citromicrobium
bathyomarinum JL354]
Length = 643
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/372 (41%), Positives = 197/372 (52%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAG +G A+ L K
Sbjct: 97 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAG----------IGFAMANKLQDKPG 146
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L R+ S+ +
Sbjct: 147 RAIAVIGDGAMSAGMAYEAMNNAEQAGNRLVVILNDNDMSIAPPVGGLSAYLARVVSSGE 206
Query: 92 F---RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+ R L + +K ++ + + + F+R + G FE+LG YY+GP+DGHNL
Sbjct: 207 YLGLRSLASKV--AKKMHRRIHSSLGKAEEFTRGMVTG--GTLFEELGFYYVGPIDGHNL 262
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAM----------------------------- 179
+ L VL+ V+ D G VLIHV+TEK K
Sbjct: 263 DHLIPVLENVRD-SDQGPVLIHVVTEKGKGYKFAEQASDKYHGVSKFDVITGEQKKSSGG 321
Query: 180 ----------LPLKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
KL +T + M GTG++ F K P R FDVGIAEQH VTFA
Sbjct: 322 PPNYQNVFGETLAKLAETDKRIVAITAAMPSGTGVDKFAKAHPERTFDVGIAEQHGVTFA 381
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA+G++PF AIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 382 AGLAAQGMRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDV 441
Query: 290 TFMACLPNMVVM 301
T++A LPNMVVM
Sbjct: 442 TYLATLPNMVVM 453
>gi|258541495|ref|YP_003186928.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-01]
gi|384041416|ref|YP_005480160.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-12]
gi|384049931|ref|YP_005476994.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-03]
gi|384053041|ref|YP_005486135.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-07]
gi|384056273|ref|YP_005488940.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-22]
gi|384058914|ref|YP_005498042.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-26]
gi|384062208|ref|YP_005482850.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-32]
gi|384118284|ref|YP_005500908.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256632573|dbj|BAH98548.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-01]
gi|256635630|dbj|BAI01599.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-03]
gi|256638685|dbj|BAI04647.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-07]
gi|256641739|dbj|BAI07694.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-22]
gi|256644794|dbj|BAI10742.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-26]
gi|256647849|dbj|BAI13790.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-32]
gi|256650902|dbj|BAI16836.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256653893|dbj|BAI19820.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-12]
Length = 675
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 199/379 (52%), Gaps = 91/379 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 106 IRTLRQPGGLSGFTRRAESKYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 155
Query: 54 ------HVISVIVEGATIARMSYEAINNAGVLNKALKRL-----------------HSNP 90
+VI+VI +G+ A M+YEA+NNA V +RL SN
Sbjct: 156 PSYRERNVIAVIGDGSISAGMAYEAMNNAAVAGPGAERLIVILNDNEMSIAPPVGAMSNY 215
Query: 91 QFRQLCQEAFSS-KDKKQKFGGQM--------HEIDAFSREIEAGSRACFFEDLGLYYIG 141
R + F ++ KF ++ + D ++R + G FE+LG YY+G
Sbjct: 216 LSRLMSSRKFMGLRELAGKFVKKLPAPVERTARKADEYARGMITG--GTLFEELGFYYVG 273
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK------------------ 183
PVDGH+L L +L+ ++ D G +++HVITEK P +
Sbjct: 274 PVDGHDLPQLVSILRNLRDT-DNGPIMLHVITEKGHGYQPAEKAGDKYHAVAKFNVVTGE 332
Query: 184 --------LQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T +F + L R M GTGL+ F K +P R FDVGIAE
Sbjct: 333 QKKGPAGPPSYTSVFSRELTRRAATDNKIAAITAAMPSGTGLDAFAKAYPDRFFDVGIAE 392
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGL+PFCAIYS+FLQR +DQV HDV LQKLPVRFAIDRAGLVGADG T
Sbjct: 393 QHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGAT 452
Query: 283 HCGAFDTTFMACLPNMVVM 301
H G+FD ++ CLP M +M
Sbjct: 453 HAGSFDIAYLGCLPGMTIM 471
>gi|258542580|ref|YP_003188013.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-01]
gi|384042501|ref|YP_005481245.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-12]
gi|384051018|ref|YP_005478081.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-03]
gi|384054126|ref|YP_005487220.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-07]
gi|384057360|ref|YP_005490027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-22]
gi|384060001|ref|YP_005499129.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-26]
gi|384063293|ref|YP_005483935.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-32]
gi|384119303|ref|YP_005501927.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256633658|dbj|BAH99633.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-01]
gi|256636717|dbj|BAI02686.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-03]
gi|256639770|dbj|BAI05732.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-07]
gi|256642826|dbj|BAI08781.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-22]
gi|256645881|dbj|BAI11829.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-26]
gi|256648934|dbj|BAI14875.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-32]
gi|256651921|dbj|BAI17855.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256654978|dbj|BAI20905.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
IFO 3283-12]
Length = 662
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 199/379 (52%), Gaps = 91/379 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 103 IRTLRQPGGLSGFTRRAESKYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 152
Query: 54 ------HVISVIVEGATIARMSYEAINNAGVLNKALKRL-----------------HSNP 90
+VI+VI +G+ A M+YEA+NNA V +RL SN
Sbjct: 153 PSYRERNVIAVIGDGSISAGMAYEAMNNAAVAGPGAERLIVILNDNEMSIAPPVGAMSNY 212
Query: 91 QFRQLCQEAFSS-KDKKQKFGGQM--------HEIDAFSREIEAGSRACFFEDLGLYYIG 141
R + F ++ KF ++ + D ++R + G FE+LG YY+G
Sbjct: 213 LSRLMSSRKFMGLRELAGKFVKKLPAPVERTARKADEYARGMITG--GTLFEELGFYYVG 270
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK------------------ 183
PVDGH+L L +L+ ++ D G +++HVITEK P +
Sbjct: 271 PVDGHDLPQLVSILRNLRDT-DNGPIMLHVITEKGHGYQPAEKAGDKYHAVAKFNVVTGE 329
Query: 184 --------LQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T +F + L R M GTGL+ F K +P R FDVGIAE
Sbjct: 330 QKKGPAGPPSYTSVFSRELTRRAATDNKIAAITAAMPSGTGLDAFAKAYPDRFFDVGIAE 389
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGL+PFCAIYS+FLQR +DQV HDV LQKLPVRFAIDRAGLVGADG T
Sbjct: 390 QHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGAT 449
Query: 283 HCGAFDTTFMACLPNMVVM 301
H G+FD ++ CLP M +M
Sbjct: 450 HAGSFDIAYLGCLPGMTIM 468
>gi|218662337|ref|ZP_03518267.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium etli IE4771]
Length = 386
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA+ DL +
Sbjct: 12 IRTLRQENGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAIAADLDKTDR 61
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ +
Sbjct: 62 RVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 121
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 122 YMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 181
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 182 PVLRNVRDNAR-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPSY 240
Query: 187 TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + L D+++ G GTGL+ F + FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 241 TSVFAEALVQEAALDDKIVGITAAMPNGTGLDKFAEAFPSRCFDVGIAEQHAVTFAAGLA 300
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDT F+
Sbjct: 301 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLT 360
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 361 TLPGFVVM 368
>gi|254418670|ref|ZP_05032394.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas sp. BAL3]
gi|196184847|gb|EDX79823.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas sp. BAL3]
Length = 636
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 199/371 (53%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG H+STSISA L G A RD G+ N
Sbjct: 91 IRTLRQPGGLSGFTKRSESEYDPFGAAHASTSISAAL----------GFAAARDQKGEKN 140
Query: 54 HVISVIVEGATIARMSYEAINNA-----------------------GVLNKALKRLHSNP 90
V++VI +G+ A M+YEA+NNA G ++ L L S
Sbjct: 141 KVVAVIGDGSMSAGMAYEAMNNAAEATNGQLMVILNDNDMSIAPPVGGMSAYLAGLVSGG 200
Query: 91 QFRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
++ + + S ++ + F + + ++R + G FE+LG YY+GP+DGH++E
Sbjct: 201 AYQNVRRLGRSVAQHLPRPFRNAAKKAEEYARGMVTGG--TLFEELGFYYVGPIDGHDME 258
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL-------------------- 189
+L +LK+ AI D VL+HV+T+K K P + +L
Sbjct: 259 NLVPILKKAAAIEDR-PVLVHVVTQKGKGYAPAESSADKLHAVVKFDVVSGKQAKSVSNA 317
Query: 190 --FCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+ K+ M GTGL+LF + FP R +DVGIAEQHAVTFAA
Sbjct: 318 PSYTKVFGTELIKHAALDPSIVAITAAMPSGTGLDLFGQAFPDRTYDVGIAEQHAVTFAA 377
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLAA+G+KP CAIYS+FLQR +DQV HDV +Q LPVRFA+DRAGLVGADG TH G+FD
Sbjct: 378 GLAADGMKPVCAIYSTFLQRGYDQVVHDVAIQSLPVRFAMDRAGLVGADGATHAGSFDIG 437
Query: 291 FMACLPNMVVM 301
FM LP MV+M
Sbjct: 438 FMGALPGMVLM 448
>gi|409400110|ref|ZP_11250273.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidocella sp. MX-AZ02]
gi|409130838|gb|EKN00576.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidocella sp. MX-AZ02]
Length = 646
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 204/372 (54%), Gaps = 83/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL + +
Sbjct: 95 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVARDLKKEAD 144
Query: 54 --HVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSN-----PQFRQLC---QEAFSS 102
+VI+VI +G+ A M+YEA+NNAG + ++ + L+ N P + SS
Sbjct: 145 PRNVIAVIGDGSMSAGMAYEAMNNAGAMRSRLIVVLNDNDMSIAPPVGAMSAYLSTLISS 204
Query: 103 KD--KKQKFGGQMHEIDAFSREIEAGSR------------ACFFEDLGLYYIGPVDGHNL 148
+ + F +M + F R IE +R FE+LG YY+GP+DGHN+
Sbjct: 205 RSFMSLRDFAAKMAK--RFPRPIERTARKAEEYARGILTGGTLFEELGFYYVGPIDGHNM 262
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------LQQ-------------- 186
E L VL+ ++ VL+H++T+K K P + +Q+
Sbjct: 263 EHLMPVLRNLRDSEANEPVLLHIVTQKGKGYAPAEAAADKYHGVQKFNVVTGEQKKAPPG 322
Query: 187 ----TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F K L M GTGL+ F+ FP R FDVGIAEQHAVTFA
Sbjct: 323 PPTYTSVFAKALIAEAEADPAVVAVTAAMSPGTGLDKFEAKFPDRMFDVGIAEQHAVTFA 382
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AG+A EGLKPFCAIYS+FLQR +DQ+ HDV LQ LPVRFA+DRAGLVGADG TH GA+D
Sbjct: 383 AGMATEGLKPFCAIYSTFLQRGYDQLVHDVVLQSLPVRFAMDRAGLVGADGATHAGAYDL 442
Query: 290 TFMACLPNMVVM 301
F+ +P MV+M
Sbjct: 443 AFLGPMPRMVIM 454
>gi|126462659|ref|YP_001043773.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
ATCC 17029]
gi|221639678|ref|YP_002525940.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
KD131]
gi|126104323|gb|ABN77001.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
ATCC 17029]
gi|221160459|gb|ACM01439.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Rhodobacter sphaeroides
KD131]
Length = 648
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 158/371 (42%), Positives = 194/371 (52%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRT+RQ GL E+ +D FG HSSTSISA L G A+GR+L
Sbjct: 97 MRTLRQKGGLSGFTKRSESAYDPFGAAHSSTSISAAL----------GFAMGRELGQPVG 146
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK------------------ALKR----LHSNPQ 91
I+VI +G+ A M+YEA+N+AG LNK AL R L S
Sbjct: 147 DTIAVIGDGSITAGMAYEALNHAGHLNKRLFVILNDNDMSIAPPVGALARYLVNLSSKAP 206
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
F L A + G + + +R++ G FE+LG Y+GP+DGH++E
Sbjct: 207 FATLRAAA---DGLEASLPGPLRDGARRARQLVTGMPGGGTLFEELGFTYVGPIDGHDME 263
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L L+ +A G VLIHV+T+K K P +
Sbjct: 264 ALLQTLRAARARTT-GPVLIHVVTKKGKGYAPAENAPDKYHGVNKFDPVTGEQKKSVANA 322
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T++F L D R M GTG+++ QK FP R FDVGIAEQHAVTFAA
Sbjct: 323 PNYTKVFGSTLTEEAARDPRIVAITAAMPSGTGVDIMQKRFPNRVFDVGIAEQHAVTFAA 382
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA G+KPFCAIYSSFLQR +DQ+AHDV LQ LPVRF IDRAGLVGADG TH GAFD
Sbjct: 383 GLAGAGMKPFCAIYSSFLQRGYDQIAHDVALQNLPVRFVIDRAGLVGADGATHAGAFDVG 442
Query: 291 FMACLPNMVVM 301
F+ LPNM VM
Sbjct: 443 FLTSLPNMTVM 453
>gi|429209358|ref|ZP_19200596.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodobacter sp. AKP1]
gi|428187823|gb|EKX56397.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodobacter sp. AKP1]
Length = 648
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 158/371 (42%), Positives = 194/371 (52%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRT+RQ GL E+ +D FG HSSTSISA L G A+GR+L
Sbjct: 97 MRTLRQKGGLSGFTKRSESAYDPFGAAHSSTSISAAL----------GFAMGRELGQPVG 146
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK------------------ALKR----LHSNPQ 91
I+VI +G+ A M+YEA+N+AG LNK AL R L S
Sbjct: 147 DTIAVIGDGSITAGMAYEALNHAGHLNKRLFVILNDNDMSIAPPVGALARYLVNLSSKAP 206
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
F L A + G + + +R++ G FE+LG Y+GP+DGH++E
Sbjct: 207 FATLRAAA---DGLEASLPGPLRDGARRARQLVTGMPGGGTLFEELGFTYVGPIDGHDME 263
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L L+ +A G VLIHV+T+K K P +
Sbjct: 264 ALLQTLRAARARTT-GPVLIHVVTKKGKGYAPAENAPDKYHGVNKFDPVTGEQKKSVANA 322
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T++F L D R M GTG+++ QK FP R FDVGIAEQHAVTFAA
Sbjct: 323 PNYTKVFGSTLTEEAARDPRIVAITAAMPSGTGVDIMQKRFPNRVFDVGIAEQHAVTFAA 382
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA G+KPFCAIYSSFLQR +DQ+AHDV LQ LPVRF IDRAGLVGADG TH GAFD
Sbjct: 383 GLAGAGMKPFCAIYSSFLQRGYDQIAHDVALQNLPVRFVIDRAGLVGADGATHAGAFDVG 442
Query: 291 FMACLPNMVVM 301
F+ LPNM VM
Sbjct: 443 FLTSLPNMTVM 453
>gi|378825151|ref|YP_005187883.1| hypothetical protein SFHH103_00558 [Sinorhizobium fredii HH103]
gi|365178203|emb|CCE95058.1| dxs [Sinorhizobium fredii HH103]
Length = 871
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 203/368 (55%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV DL GK+
Sbjct: 325 IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAADLDGKSR 374
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSS---------- 102
+VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+
Sbjct: 375 NVIAVIGDGALSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 434
Query: 103 ----KDKKQKFGGQMHE-ID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
++ +K + + +D A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 435 YMGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGGTLFEEMGFYHIGPIDGHSFDHLL 494
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV+T+K K P +
Sbjct: 495 PVLRNVRDNRR-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPAY 553
Query: 184 --------LQQTRLFCKI--LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+Q+ L KI + M GTGL+ F P RCFDVGIAEQHAVTFAAGLA
Sbjct: 554 TSVFADALVQEASLDDKIVAITAAMPSGTGLDRFAAVHPSRCFDVGIAEQHAVTFAAGLA 613
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDTT++A
Sbjct: 614 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYLA 673
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 674 SLPGFVVM 681
>gi|332558698|ref|ZP_08413020.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
WS8N]
gi|332276410|gb|EGJ21725.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
WS8N]
Length = 648
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/371 (42%), Positives = 194/371 (52%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRT+RQ GL E+ +D FG HSSTSISA L G A+GR+L
Sbjct: 97 MRTLRQKGGLSGFTKRSESAYDPFGAAHSSTSISAAL----------GFAMGRELGQPVG 146
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK------------------ALKR----LHSNPQ 91
I+VI +G+ A M+YEA+N+AG LNK AL R L S
Sbjct: 147 DTIAVIGDGSITAGMAYEALNHAGHLNKRLFVILNDNDMSIAPPVGALARYLVNLSSKAP 206
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
F L A + G + + +R++ G FE+LG Y+GP+DGH++E
Sbjct: 207 FATLRAAA---DGLEASLPGPLRDGARRARQLVTGMPGGGTLFEELGFTYVGPIDGHDME 263
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L L+ +A G VLIHV+T+K K P +
Sbjct: 264 ALLQTLRAARARTT-GPVLIHVVTKKGKGYAPAENAPDKYHGVNKFDPVTGEQKKSVANA 322
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T++F L D R M GTG+++ QK FP R FDVGIAEQHAVTFAA
Sbjct: 323 PNYTKVFGSTLTEEAARDPRIVAITAAMPSGTGVDIMQKRFPNRVFDVGIAEQHAVTFAA 382
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA G+KPFCAIYSSFLQR +DQ+AHDV LQ LPVRF IDRAGLVGADG TH GAFD
Sbjct: 383 GLAGAGMKPFCAIYSSFLQRGYDQIAHDVALQNLPVRFVIDRAGLVGADGATHAGAFDVG 442
Query: 291 FMACLPNMVVM 301
F+ LPNM VM
Sbjct: 443 FLTSLPNMTVM 453
>gi|224089136|ref|XP_002308644.1| predicted protein [Populus trichocarpa]
gi|222854620|gb|EEE92167.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/382 (39%), Positives = 199/382 (52%), Gaps = 96/382 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +D FG GH SISAG +GMA+ RD+ GK
Sbjct: 102 MHTLRQKDGLSGFTSRSESEYDPFGAGHGCNSISAG----------IGMAIARDIKGKRE 151
Query: 54 HVISVIVEGATIARMSYEAINNAG------------------------------VLNKAL 83
+++VI G T+A YEA+ NAG L+ L
Sbjct: 152 RIVTVIGNGTTMAGQVYEAMGNAGYLDTNMIVILNDSRHSLHPKIEEGSKTSITALSSTL 211
Query: 84 KRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYY 139
+L S+ FR+L + A K ++ G MHE +D ++R + + FE+LGLYY
Sbjct: 212 SKLQSSKSFRRLREVA---KGVTKRIG--MHELAAKVDEYARGMMGPLGSTLFEELGLYY 266
Query: 140 IGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK------EKAMLPLKLQQTRLFCKI 193
IGPVDGHN+ +L VL++V ++ G VLIHVITE+ ++ ++ QQ +
Sbjct: 267 IGPVDGHNIGELVCVLQEVSSLDSMGPVLIHVITEENQCTEYKQPSEAMENQQEGILSSF 326
Query: 194 LDNR----------------------------------MGGGTGLNLFQKHFPIRCFDVG 219
N M LF++ FP R FD+G
Sbjct: 327 DSNELLYSMHARTYSDCFVEALIMEAEKDKDIVIVHAGMEMDPSFQLFRERFPDRFFDLG 386
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
+AEQHAVTF+AGL+ GLKPFC I S+F+QR +DQV HDVD Q++PVRF I AGLVG+D
Sbjct: 387 MAEQHAVTFSAGLSCGGLKPFCIIPSAFMQRAYDQVVHDVDRQRIPVRFVITSAGLVGSD 446
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPT CGAFD TFM+CLPNM+VM
Sbjct: 447 GPTMCGAFDITFMSCLPNMIVM 468
>gi|77463823|ref|YP_353327.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
2.4.1]
gi|119368195|sp|Q3J1A8.1|DXS1_RHOS4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
synthase 1; Short=DXPS 1
gi|77388241|gb|ABA79426.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
2.4.1]
Length = 648
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/371 (42%), Positives = 194/371 (52%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRT+RQ GL E+ +D FG HSSTSISA L G A+GR+L
Sbjct: 97 MRTLRQKGGLSGFTKRSESAYDPFGAAHSSTSISAAL----------GFAMGRELGQPVG 146
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK------------------ALKR----LHSNPQ 91
I+VI +G+ A M+YEA+N+AG LNK AL R L S
Sbjct: 147 DTIAVIGDGSITAGMAYEALNHAGHLNKRLFVILNDNDMSIAPPVGALARYLVNLSSKAP 206
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
F L A + G + + +R++ G FE+LG Y+GP+DGH++E
Sbjct: 207 FATLRAAA---DGLEASLPGPLRDGARRARQLVTGMPGGGTLFEELGFTYVGPIDGHDME 263
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L L+ +A G VLIHV+T+K K P +
Sbjct: 264 ALLQTLRAARARTT-GPVLIHVVTKKGKGYAPAENAPDKYHGVNKFDPVTGEQKKSVANA 322
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T++F L D R M GTG+++ QK FP R FDVGIAEQHAVTFAA
Sbjct: 323 PNYTKVFGSTLTEEAARDPRIVAITAAMPSGTGVDIMQKRFPNRVFDVGIAEQHAVTFAA 382
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA G+KPFCAIYSSFLQR +DQ+AHDV LQ LPVRF IDRAGLVGADG TH GAFD
Sbjct: 383 GLAGAGMKPFCAIYSSFLQRGYDQIAHDVALQNLPVRFVIDRAGLVGADGATHAGAFDVG 442
Query: 291 FMACLPNMVVM 301
F+ LPNM VM
Sbjct: 443 FITSLPNMTVM 453
>gi|223943853|gb|ACN26010.1| unknown [Zea mays]
gi|413945324|gb|AFW77973.1| hypothetical protein ZEAMMB73_720473 [Zea mays]
Length = 413
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 146/216 (67%), Gaps = 39/216 (18%)
Query: 125 AGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EK 177
+G + FE+LGLYYIGPVDGHN++DL +L VK+ G VLIHV+TEK E+
Sbjct: 3 SGPGSSLFEELGLYYIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTEKGRGYPYAER 62
Query: 178 AM------------------LPLK-LQQTRLFCKIL------DNR-------MGGGTGLN 205
A P K L T F + L D++ MGGGTGLN
Sbjct: 63 AADKYHGVAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLN 122
Query: 206 LFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLP 265
F + FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLP
Sbjct: 123 YFLRRFPSRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLP 182
Query: 266 VRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
VRFA+DRAGLVGADGPTHCGAFD +MACLPNMVVM
Sbjct: 183 VRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVM 218
>gi|85709905|ref|ZP_01040970.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. NAP1]
gi|85688615|gb|EAQ28619.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. NAP1]
Length = 641
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 199/372 (53%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RTIRQ GL E+ +D FG HSSTSISA L G A+ L K
Sbjct: 94 IRTIRQGGGLSGFTKRAESEYDPFGAAHSSTSISAAL----------GFAIANKLNDKPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L R+ S+ +
Sbjct: 144 RGIAVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDNDMSIAPPVGGLSAYLARMVSSSE 203
Query: 92 F---RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+ R L +A K ++ + + + +SR + G FE+LG YY+GP+DGHNL
Sbjct: 204 YLGLRSLASKAV--KKMSRRLHDALGKAEEYSRGMVTG--GTLFEELGFYYVGPIDGHNL 259
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR-------------------- 188
+ L VL+ V+ + G VLIHV+TEK K P + +
Sbjct: 260 DHLIPVLENVRDTSE-GPVLIHVVTEKGKGYKPAEESADKYHGVPKFNVVTGEKQKGSAG 318
Query: 189 ------LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+F L D R M GTG++ F + P R FDVGIAEQH VTFA
Sbjct: 319 APAYQNVFGDTLADLADTDKRICAITAAMPSGTGVDRFAQRHPDRSFDVGIAEQHGVTFA 378
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA+G++PF AIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 379 AGLAAQGMRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGCTHAGSFDI 438
Query: 290 TFMACLPNMVVM 301
T++A LPNMVVM
Sbjct: 439 TYLATLPNMVVM 450
>gi|86356559|ref|YP_468451.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium etli CFN 42]
gi|118595609|sp|Q2KBR2.1|DXS_RHIEC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|86280661|gb|ABC89724.1| 1-deoxy-D-xylulose-5-phosphate synthase protein [Rhizobium etli CFN
42]
Length = 638
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA+ DL +
Sbjct: 94 IRTLRQENGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAIAADLEKTDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 RVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRDNAR-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPSY 322
Query: 187 TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + L D+++ G GTGL+ + FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALVQEAALDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDT F+A
Sbjct: 383 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLA 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>gi|359408195|ref|ZP_09200667.1| 1-deoxy-D-xylulose-5-phosphate synthase [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676952|gb|EHI49301.1| 1-deoxy-D-xylulose-5-phosphate synthase [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 640
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/369 (42%), Positives = 201/369 (54%), Gaps = 79/369 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +RQ GL E+ +D FG GHSSTSISAGL GMAV RDL G +N
Sbjct: 93 MSGLRQEGGLSGFTKRSESDYDPFGAGHSSTSISAGL----------GMAVARDLQGGHN 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLC---QEAFSSKD 104
+VI+VI +GA A M++EA+NNAG ++ L + P + E SS+
Sbjct: 143 NVIAVIGDGAMSAGMAFEALNNAGAMDSNLLVILNDNDMSIAPPVGAMSAYLSEMISSR- 201
Query: 105 KKQKFGGQMHEIDA-FSREIEAGSRAC------------FFEDLGLYYIGPVDGHNLEDL 151
Q + E+ + F EIE +R F +LG ++IGP+DGH+ + L
Sbjct: 202 PYQSIRDLVKEVASRFPAEIEKTARRAKDLARDLVSGHSLFSELGFFHIGPIDGHDFDHL 261
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKA------------MLP----LKLQQ--------- 186
VL+ +K G VL+HV+TEK K +P + QQ
Sbjct: 262 LPVLRNLKDGQIGGPVLVHVVTEKGKGHPFAGPSSEKYHAVPKFDVVTGQQSKSSANSPT 321
Query: 187 -TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
T++F L D + M GTGLN P R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTQVFADTLSALAEEDEKIVAITAAMPSGTGLNQMMTTCPSRVFDVGIAEQHAVTFAAGL 381
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
A EG+KPF AIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAG+VGADG TH G FD ++
Sbjct: 382 ATEGMKPFAAIYSTFLQRGYDQLVHDVAIQNLPVRFAIDRAGVVGADGATHAGVFDLAYL 441
Query: 293 ACLPNMVVM 301
ACLPNMV+M
Sbjct: 442 ACLPNMVIM 450
>gi|227821074|ref|YP_002825044.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium fredii
NGR234]
gi|227340073|gb|ACP24291.1| 1-deoxy-D-xylulose 5-phosphate synthase [Sinorhizobium fredii
NGR234]
Length = 645
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV DL GK+
Sbjct: 99 IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAADLDGKSR 148
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSS---------- 102
+VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+
Sbjct: 149 NVIAVIGDGALSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 208
Query: 103 ----KDKKQKFGGQMHE-ID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
++ +K + + +D A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 209 YMGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGGTLFEEMGFYHIGPIDGHSFDHLL 268
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV+T+K K P +
Sbjct: 269 PVLRNVRD-NRRGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPAY 327
Query: 184 --------LQQTRLFCKI--LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
Q+ L KI + M GTGL+ F P RCFDVGIAEQHAVTFAAGLA
Sbjct: 328 TSVFADALTQEASLDDKIVAITAAMPHGTGLDRFAAVHPSRCFDVGIAEQHAVTFAAGLA 387
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDTT++A
Sbjct: 388 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYLA 447
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 448 SLPGFVVM 455
>gi|424873984|ref|ZP_18297646.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
bv. viciae WSM1455]
gi|393169685|gb|EJC69732.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
bv. viciae WSM1455]
Length = 638
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA+ DL +
Sbjct: 94 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAIAADLDKSDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 RVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRD-NGRGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPSY 322
Query: 187 TRLFCK------ILDNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + LD+++ G GTGL+ + FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALVQEATLDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDTTF+
Sbjct: 383 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTFLT 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>gi|167647276|ref|YP_001684939.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter sp. K31]
gi|254782067|sp|B0T3X7.1|DXS_CAUSK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|167349706|gb|ABZ72441.1| deoxyxylulose-5-phosphate synthase [Caulobacter sp. K31]
Length = 638
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 151/370 (40%), Positives = 203/370 (54%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
++T+RQ GL E+V+D FG H++TSISA L G RD G+NN
Sbjct: 92 IKTLRQGGGLSGFTKRAESVYDPFGAAHAATSISAAL----------GFCAARDAKGENN 141
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
VI+VI +G+ A M+YEA+N A G ++ L L S
Sbjct: 142 SVIAVIGDGSMSAGMAYEAMNAAVDTTKRLIVILNDNDMSIAPPVGGMSAYLANLVSGGA 201
Query: 92 FRQLCQEAFSSKDK-KQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R++ + + +K + + ++R + G FFE+LG +Y+GP+DGH+++
Sbjct: 202 YRKVRKLGKTVVEKLPTPIRDAARKAEEYARGMVTGG--TFFEELGFHYVGPIDGHDMDA 259
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLP----------------LKLQQ-------- 186
L VL VK D VL+HV+T+K K P + QQ
Sbjct: 260 LVSVLNNVKHF-DEKPVLVHVVTQKGKGYAPAEGAADKLHAVVKFDVVTGQQHKAAAGPP 318
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T++F + L D++ M GTGL+LF K +P R FDVGIAEQHAVTFAAG
Sbjct: 319 SYTKVFAQELIKHAAVDDKIMAITAAMPSGTGLDLFGKAYPERTFDVGIAEQHAVTFAAG 378
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA+G+KPF AIYS+FLQR +DQV HDV +Q+LPVRFA+DRAGLVGADGPTH G FD F
Sbjct: 379 LAADGMKPFVAIYSTFLQRGYDQVVHDVAIQRLPVRFAMDRAGLVGADGPTHAGTFDLGF 438
Query: 292 MACLPNMVVM 301
M LP MV+M
Sbjct: 439 MGALPGMVLM 448
>gi|190890626|ref|YP_001977168.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium etli CIAT 652]
gi|229836075|sp|B3PS68.1|DXS_RHIE6 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|190695905|gb|ACE89990.1| 1-deoxy-D-xylulose-5-phosphate synthase protein [Rhizobium etli
CIAT 652]
Length = 638
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA+ DL +
Sbjct: 94 IRTLRQENGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAIAADLDKNDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 RVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRDNAR-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPSY 322
Query: 187 TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + L D+++ G GTGL+ + FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALVQEAALDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDT F+A
Sbjct: 383 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLA 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>gi|407784767|ref|ZP_11131916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Celeribacter baekdonensis
B30]
gi|407204469|gb|EKE74450.1| 1-deoxy-D-xylulose-5-phosphate synthase [Celeribacter baekdonensis
B30]
Length = 642
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 159/372 (42%), Positives = 197/372 (52%), Gaps = 82/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISA L G AV RDL G
Sbjct: 94 IRTLRTEGGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGGAPE 143
Query: 54 H----VISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQK 108
+ I+VI +G+ A M++EA+NNAG L K L L+ N A SS +
Sbjct: 144 NGIGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLIVILNDNEMSIAPPTGALSSYLTRLY 203
Query: 109 FGGQMHEIDAFSREI---------EAGSRA-----------CFFEDLGLYYIGPVDGHNL 148
G E+ A ++ E RA FE+LG Y+GP+DGH+L
Sbjct: 204 AGAPFQELKAAAKGAVSLLPHPFQEGAKRAKEMLKGMTVGGTLFEELGFSYVGPIDGHDL 263
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
+ L VL+ VKA G +LIH IT+K K P + +
Sbjct: 264 DQLLSVLRTVKARAT-GPILIHAITQKGKGYAPAEGRPDKGHATGKFDMVTGEQKKAKSN 322
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F K L D++ M GTGLNLF + FP RCFDVGIAEQH VTF
Sbjct: 323 APSYTSVFAKALIQEAGFDDKIVAVTAAMPDGTGLNLFAERFPTRCFDVGIAEQHGVTFC 382
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA G+KPFC +YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 383 AGLAAGGMKPFCTMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDV 442
Query: 290 TFMACLPNMVVM 301
F+A LP MVVM
Sbjct: 443 AFLANLPGMVVM 454
>gi|341613385|ref|ZP_08700254.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citromicrobium sp.
JLT1363]
Length = 632
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 153/372 (41%), Positives = 197/372 (52%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAG +G A+ L K
Sbjct: 86 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAG----------IGFAMANRLQDKPG 135
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L R+ S+ +
Sbjct: 136 RAIAVIGDGAMSAGMAYEAMNNAEQAGNRLVVILNDNDMSIAPPVGGLSAYLARVVSSGE 195
Query: 92 F---RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+ R L + +K ++ + + + F+R + G FE+LG YY+GP+DGHNL
Sbjct: 196 YLGLRSLASKV--AKKMHRRIHSSLGKAEEFTRGMVTG--GTLFEELGFYYVGPIDGHNL 251
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAM----------------------------- 179
+ L VL+ V+ D G VLIHV+TEK K
Sbjct: 252 DHLIPVLENVRD-SDQGPVLIHVVTEKGKGYKFAEESADKYHGVSKFDVITGEQKKSKGG 310
Query: 180 ----------LPLKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
KL +T + M GGTG++ F K P R FDVGIAEQH VTFA
Sbjct: 311 PPNYQNVFGETLAKLAETDTRICAITAAMPGGTGVDKFAKAHPERSFDVGIAEQHGVTFA 370
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA+G++PF AIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 371 AGLAAQGMRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDI 430
Query: 290 TFMACLPNMVVM 301
T++A LPN VVM
Sbjct: 431 TYLATLPNFVVM 442
>gi|114769862|ref|ZP_01447472.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
HTCC2255]
gi|114549567|gb|EAU52449.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
HTCC2255]
Length = 642
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 159/372 (42%), Positives = 201/372 (54%), Gaps = 82/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRTIR+ GL E+ D FG HSSTSISA L G AV RDL G
Sbjct: 95 MRTIRKGGGLSGFTKRSESAFDPFGAAHSSTSISAAL----------GFAVARDLGGAPE 144
Query: 54 H----VISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQK 108
H I+VI +G+ A M+YEA+NNAG L K L L+ N A S+ +
Sbjct: 145 HGLGDAIAVIGDGSMSAGMAYEAMNNAGHLGKRLIVILNDNKMSIAPPVGAMSTYLSRLY 204
Query: 109 FGGQMHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNL 148
G E+ A ++ + G++ FE LG YIGP+DGH++
Sbjct: 205 AGEPFQELKAAAKGAVSLLPSPFQDGAKRARDILKHMTIGGTLFEQLGFSYIGPIDGHDM 264
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL-----------------QQ----- 186
E L VL+ VK G +LIH IT+K K P + QQ
Sbjct: 265 EQLLNVLRTVKDRAT-GPILIHAITQKGKGYAPAEASSDKYHGVAKFNVVSGQQQKTPSN 323
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T++F L D++ M GTGL++F+KH+P R FDVGIAEQHAVTF
Sbjct: 324 APSYTKVFANALIAEASEDDKIVAVTAAMPDGTGLDIFEKHYPSRTFDVGIAEQHAVTFC 383
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AG+AA G+KPFCA+YS+FLQR +DQV HDV LQ+LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 384 AGMAAGGMKPFCALYSTFLQRGYDQVVHDVALQRLPVRFAIDRAGLVGADGATHAGSFDI 443
Query: 290 TFMACLPNMVVM 301
+F+ LP++VVM
Sbjct: 444 SFLTNLPDIVVM 455
>gi|408788445|ref|ZP_11200164.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium lupini HPC(L)]
gi|408485687|gb|EKJ94022.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium lupini HPC(L)]
Length = 639
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAV L G +
Sbjct: 94 IRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSISAGL----------GMAVAAGLDGSDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +G+ A M++EA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 KVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R + + FE+LG Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGGTLFEELGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRD-NQKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPSY 322
Query: 184 --------LQQTRLFCKIL--DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+Q+ L KI+ M GTGL+ + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALIQEATLDEKIIGVTAAMPNGTGLDKMAELFPARTFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A+G KPFCA+YS+FLQR +DQ+ HDV +Q LPVRF IDRAG VGADGPTH G+FDTTF+A
Sbjct: 383 ADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFLA 442
Query: 294 CLPNMVVM 301
LP MVVM
Sbjct: 443 TLPGMVVM 450
>gi|424909631|ref|ZP_18333008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
bv. viciae USDA 2370]
gi|392845662|gb|EJA98184.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
bv. viciae USDA 2370]
Length = 636
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAV L G +
Sbjct: 91 IRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSISAGL----------GMAVAAGLDGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +G+ A M++EA+NNAG L+ + + L+ N A S+ +
Sbjct: 141 KVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 200
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R + + FE+LG Y+IGP+DGH+ + L
Sbjct: 201 YMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGGTLFEELGFYHIGPIDGHSFDHLL 260
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV+T+K K P +
Sbjct: 261 PVLRNVRD-NQKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPSY 319
Query: 184 --------LQQTRLFCKIL--DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+Q+ L KI+ M GTGL+ + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 320 TSVFAEALIQEATLDEKIIGVTAAMPNGTGLDKMAELFPARTFDVGIAEQHAVTFAAGLA 379
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A+G KPFCA+YS+FLQR +DQ+ HDV +Q LPVRF IDRAG VGADGPTH G+FDTTF+A
Sbjct: 380 ADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFLA 439
Query: 294 CLPNMVVM 301
LP MVVM
Sbjct: 440 TLPGMVVM 447
>gi|413953253|gb|AFW85902.1| hypothetical protein ZEAMMB73_111194 [Zea mays]
Length = 611
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 151/381 (39%), Positives = 196/381 (51%), Gaps = 94/381 (24%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI Q GL E+ +D FG GH S+SAGL GMAV RD+ G+ N +
Sbjct: 55 TITQKNGLSGFTSRFESEYDPFGAGHGCNSLSAGL----------GMAVARDINGRKNRI 104
Query: 56 ISVIVEGATIARMSYEAINNAGVLNK------------------------------ALKR 85
++VI T+A YEA+ +AG L+ AL +
Sbjct: 105 VTVISNWTTMAGQVYEAMGHAGFLDSNMVVILNDSCHTLLPKADGGAKMSVNAFSSALSK 164
Query: 86 LHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIG 141
+ S+ FR+ + A K + FG MHE +D ++R + A FE+LGLYYIG
Sbjct: 165 IQSSKGFRRFREAA---KGLAKWFGKGMHEFAAKVDEYARGMIGPHGATLFEELGLYYIG 221
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEK------------------------ 177
P+DG N++DL VLK+V ++ G VL+HVIT E
Sbjct: 222 PIDGRNIDDLICVLKEVASLDSTGPVLVHVITGTENDTGGIIGSEINAVEEGPSNSSPDL 281
Query: 178 -AMLPLKLQQTRLFC---------------KILDNRMGGGTGLNLFQKHFPIRCFDVGIA 221
L L +T C ++ MG L LFQ FP R FD+GIA
Sbjct: 282 LKFLGTGLSRTYNDCFVEALTAEAENDKRIVVVHGGMGIDRSLRLFQSRFPDRFFDLGIA 341
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTF+AGLA GLKPFC I S+FLQR +DQ+ DVD+QK+PVRFAI AGLVG++GP
Sbjct: 342 EQHAVTFSAGLACGGLKPFCIIPSTFLQRAYDQIIEDVDMQKIPVRFAITNAGLVGSEGP 401
Query: 282 THCGAFDTTFMACLPNMVVMK 302
T+ G FD TFM+CLPNM+VM
Sbjct: 402 TNSGPFDITFMSCLPNMIVMS 422
>gi|188581083|ref|YP_001924528.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium populi
BJ001]
gi|179344581|gb|ACB79993.1| deoxyxylulose-5-phosphate synthase [Methylobacterium populi BJ001]
Length = 660
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 159/382 (41%), Positives = 196/382 (51%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL----- 48
+RT+RQ GL E+ +D FG HSSTSISA L GMAV RDL
Sbjct: 96 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GMAVARDLDDAEA 145
Query: 49 ------LGKNNHVISVIVEGATIARMSYEAINNAGVLNKAL------------------- 83
GK ++I+VI +G+ A M+YEA+NNAG L+ L
Sbjct: 146 KAKGEAPGKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDNDMSIAPPVGAMS 205
Query: 84 ---KRLHSNPQFRQLCQEA--FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLY 138
RL S +R L + A K + + I G FE++G +
Sbjct: 206 AYLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG--TMFEEMGFH 263
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------ 186
Y+GPVDGHNL+ L VLK V+ D G +L+HV+T+K K P +
Sbjct: 264 YVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVV 322
Query: 187 --------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
TR+F + L D + M GGTG++LF K P R FDVG
Sbjct: 323 SGVQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVG 382
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG KPF AIYS+FLQR +DQV HDV LQ LPVRF +DRAGLVGAD
Sbjct: 383 IAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLDRAGLVGAD 442
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
G TH GAFD ++ CLPNM VM
Sbjct: 443 GATHAGAFDLAYLCCLPNMTVM 464
>gi|295688781|ref|YP_003592474.1| deoxyxylulose-5-phosphate synthase [Caulobacter segnis ATCC 21756]
gi|295430684|gb|ADG09856.1| deoxyxylulose-5-phosphate synthase [Caulobacter segnis ATCC 21756]
Length = 640
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 153/371 (41%), Positives = 200/371 (53%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG H++TSISA L G RD G++N
Sbjct: 92 IRTLRQGGGLSGFTKRAESEYDPFGAAHAATSISAAL----------GFCAARDAKGEDN 141
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
V++VI +G+ A M+YEA+N A G ++ L L S
Sbjct: 142 SVVAVIGDGSLGAGMAYEAMNAATDTTKRLIVILNDNDMSIAPPVGGMSAYLANLVSGGA 201
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
+R + + K +K M E + E G + FFE+LG +Y+GP+DGH+++
Sbjct: 202 YRSVRK---LGKTVVEKLPSPMREAARKAEEYARGMVTGGTFFEELGFHYVGPIDGHDMD 258
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-----------------LQQ------ 186
L VLK KA D VL+H +T+K K P + QQ
Sbjct: 259 ALVSVLKNAKAFADK-PVLVHCVTQKGKGYAPAEGADDKLHAVVKFDVVTGQQQKSAGGP 317
Query: 187 ---TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T++F + L D++ M GTGL+LF K FP R FDVGIAEQHAVTFAA
Sbjct: 318 PSYTKVFAQELIKQAEKDDKIVAITAAMPSGTGLDLFGKAFPDRTFDVGIAEQHAVTFAA 377
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLAA+G+KPF AIYS+FLQR +DQV HDV +Q LPVRFA+DRAGLVGADGPTH G+FD
Sbjct: 378 GLAADGMKPFTAIYSTFLQRGYDQVVHDVAIQGLPVRFAMDRAGLVGADGPTHAGSFDIG 437
Query: 291 FMACLPNMVVM 301
FM LP MV+M
Sbjct: 438 FMGALPGMVLM 448
>gi|335032694|ref|ZP_08526069.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium sp. ATCC
31749]
gi|333795869|gb|EGL67191.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium sp. ATCC
31749]
Length = 636
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAV L G +
Sbjct: 91 IRTLRQEDGLSGFTRRAESEYDDFGAGHSSTSISAGL----------GMAVAAGLDGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +G+ A M++EA+NNAG L+ + + L+ N A S+ +
Sbjct: 141 KVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 200
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R + + FE+LG Y+IGP+DGH+ + L
Sbjct: 201 YMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGGTLFEELGFYHIGPIDGHSFDHLL 260
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV+T+K K P +
Sbjct: 261 PVLRNVRD-NQKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPSY 319
Query: 184 --------LQQTRLFCKIL--DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+Q+ L KI+ M GTGL+ + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 320 TSVFAEALIQEATLDEKIIGVTAAMPNGTGLDKMAELFPARTFDVGIAEQHAVTFAAGLA 379
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A+G KPFCA+YS+FLQR +DQ+ HDV +Q LPVRF IDRAG VGADGPTH G+FDTTF+A
Sbjct: 380 ADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFLA 439
Query: 294 CLPNMVVM 301
LP MVVM
Sbjct: 440 TLPGMVVM 447
>gi|83951989|ref|ZP_00960721.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius nubinhibens
ISM]
gi|83836995|gb|EAP76292.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius nubinhibens
ISM]
Length = 621
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 200/375 (53%), Gaps = 88/375 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRT+RQ GL E+ +D FG HSSTSISA L G AV RDL G +
Sbjct: 73 MRTLRQKDGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGGASE 122
Query: 54 ----HVISVIVEGATIARMSYEAINNAGVLNKA----------------------LKRLH 87
I+VI +GA A M++EA+NNAG L K L RL+
Sbjct: 123 TGHGDAIAVIGDGAMSAGMAFEAMNNAGHLKKRMIVILNDNEMSIAPPVGALSSYLSRLY 182
Query: 88 SNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDG 145
+ F++L A K G E +R++ G FE+LG Y+GP+DG
Sbjct: 183 AEAPFQELKAAA---KGAVSLLPGPFQEGAKRARDMLKGLAVGGTLFEELGFSYLGPIDG 239
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------- 186
H+++ L VL+ V+ G +LIHV+T+K K P + +
Sbjct: 240 HDMDQLLPVLRTVQDRAT-GPILIHVLTKKGKGYGPAEAARDGGHATAKFDVVTGKQKKS 298
Query: 187 -------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAV 226
T +F + D R M GTGL LF++ +P RCFDVGIAEQHAV
Sbjct: 299 PSNAPSYTAVFSDAILAHAAEDQRICAVTAAMPDGTGLKLFEERYPSRCFDVGIAEQHAV 358
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFAAGLAA GL+PFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH G+
Sbjct: 359 TFAAGLAAGGLRPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGS 418
Query: 287 FDTTFMACLPNMVVM 301
+D F+A LP MVVM
Sbjct: 419 YDVAFLANLPGMVVM 433
>gi|354593293|ref|ZP_09011338.1| 1-deoxy-D-xylulose-5-phosphate synthase [Commensalibacter intestini
A911]
gi|353673358|gb|EHD15052.1| 1-deoxy-D-xylulose-5-phosphate synthase [Commensalibacter intestini
A911]
Length = 672
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 150/372 (40%), Positives = 204/372 (54%), Gaps = 76/372 (20%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRI-NYFRYVGMAVGRDLLGKN 52
+RT+RQ GL E+++D FG HSSTSISA L + N+++ D K
Sbjct: 119 IRTLRQPGGLSGFTKRSESIYDPFGAAHSSTSISAALGIAVANHYK-----AKHDPSYKE 173
Query: 53 NHVISVIVEGATIARMSYEAINNAGVLNKALKRLH----------SNP--QFRQLCQEAF 100
+ I+VI +G+ A M+YEA+NNA V ++L S P +
Sbjct: 174 RNSIAVIGDGSITAGMAYEAMNNAAVAGPGAEKLIVILNDNEMSISQPVGSMSVYLSQLL 233
Query: 101 SSK------DKKQKFGGQMHE-IDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNL 148
SS+ D + ++ E I+ ++ E +R+ FE+LG YY+GP+DGHNL
Sbjct: 234 SSRHFLGLRDLAARVAKKLPESIEKKAKRAEEYARSMMTGGTLFEELGFYYVGPIDGHNL 293
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP----------------LKLQQTR---- 188
+ L VL+ ++ G +L+H++T+K P + +QT+
Sbjct: 294 QQLVPVLRNLRDADQIGPILLHIVTQKGHGYKPAESSGDKYHAVSKFNVITGEQTKAPPG 353
Query: 189 ------LFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+F K L R M GTGL+ FQ+ FP R FDVGIAEQHAVTFA
Sbjct: 354 PPSYTSVFSKELLKRAKEDEKIIAITAAMPSGTGLDKFQETFPDRYFDVGIAEQHAVTFA 413
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EG++PFCAIYSSFLQR +DQV HDV LQKLPVRFAIDRAGLVGADG TH G +D
Sbjct: 414 AGLATEGMRPFCAIYSSFLQRGYDQVMHDVVLQKLPVRFAIDRAGLVGADGATHAGTYDI 473
Query: 290 TFMACLPNMVVM 301
++ CLP++V+M
Sbjct: 474 AYLGCLPDIVLM 485
>gi|15964633|ref|NP_384986.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
1021]
gi|334315344|ref|YP_004547963.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
AK83]
gi|384528590|ref|YP_005712678.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
BL225C]
gi|21263533|sp|Q92RJ1.1|DXS_RHIME RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|15073811|emb|CAC45452.1| Probable 1-deoxyxylulose-5-phosphate synthase [Sinorhizobium
meliloti 1021]
gi|333810766|gb|AEG03435.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
BL225C]
gi|334094338|gb|AEG52349.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
AK83]
Length = 645
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L GK+
Sbjct: 99 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAAELDGKSR 148
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSS---------- 102
+VI+VI +GA A M++EA+NNAG L+ + + L+ N A S+
Sbjct: 149 NVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 208
Query: 103 ----KDKKQKFGGQMHE-ID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
++ +K + + +D A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 209 YMGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGGTLFEEMGFYHIGPIDGHSFDHLL 268
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV+T+K K P +
Sbjct: 269 PVLRNVRDNAK-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPAY 327
Query: 184 --------LQQTRLFCKI--LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
Q+ L KI + M GTGL+ F P RCFDVGIAEQHAVTFAAGLA
Sbjct: 328 TSVFADALTQEASLDDKIVAITAAMPSGTGLDKFASVHPSRCFDVGIAEQHAVTFAAGLA 387
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDTT++A
Sbjct: 388 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYLA 447
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 448 TLPGFVVM 455
>gi|407719744|ref|YP_006839406.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
Rm41]
gi|407317976|emb|CCM66580.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
Rm41]
Length = 645
Score = 240 bits (612), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L GK+
Sbjct: 99 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAAELDGKSR 148
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSS---------- 102
+VI+VI +GA A M++EA+NNAG L+ + + L+ N A S+
Sbjct: 149 NVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 208
Query: 103 ----KDKKQKFGGQMHE-ID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
++ +K + + +D A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 209 YMGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGGTLFEEMGFYHIGPIDGHSFDHLL 268
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV+T+K K P +
Sbjct: 269 PVLRNVRDNAK-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPAY 327
Query: 184 --------LQQTRLFCKI--LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
Q+ L KI + M GTGL+ F P RCFDVGIAEQHAVTFAAGLA
Sbjct: 328 TSVFADALTQEASLDDKIVAITAAMPSGTGLDKFASVHPSRCFDVGIAEQHAVTFAAGLA 387
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDTT++A
Sbjct: 388 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYLA 447
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 448 TLPGFVVM 455
>gi|338708492|ref|YP_004662693.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
gi|336295296|gb|AEI38403.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
Length = 650
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 151/370 (40%), Positives = 197/370 (53%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +DAFG HSSTSISA L G A+ L K +
Sbjct: 94 IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAAL----------GFAMASKLSHKKD 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
+++I +G+ A M+YEA+NNA G L+ L RL S+
Sbjct: 144 KAVAIIGDGSMTAGMAYEAMNNAKAAGERLIVILNDNEMSISPPVGALSSYLSRLISSRP 203
Query: 92 FRQLCQEAFSSKDKKQK-FGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
F L ++ K + D ++R + G FE+LG YY+GPVDGHNL+
Sbjct: 204 FMNLRDIMRGVVNRMPKGLAIAARKADEYARGMATG--GTLFEELGFYYVGPVDGHNLDQ 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VL+ V+ D G +L+HV+T K + P + +
Sbjct: 262 LIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAEDKYHAVQRLDVVSGKQAKAPPGPP 320
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D++ M GTGL+ FQ++FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTSVFAERLIKEAQADDKIVAITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA KPFC +YS+FLQR +DQ+ HDV +Q LPVRFA+DRAGLVGADG TH G+FD F
Sbjct: 381 LAAAHYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAF 440
Query: 292 MACLPNMVVM 301
M LPNMVVM
Sbjct: 441 MVNLPNMVVM 450
>gi|384534992|ref|YP_005719077.1| probabable 1-deoxyxylulose-5-phosphate synthase protein
[Sinorhizobium meliloti SM11]
gi|336031884|gb|AEH77816.1| probabable 1-deoxyxylulose-5-phosphate synthase protein
[Sinorhizobium meliloti SM11]
Length = 658
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L GK+
Sbjct: 112 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAAELDGKSR 161
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSS---------- 102
+VI+VI +GA A M++EA+NNAG L+ + + L+ N A S+
Sbjct: 162 NVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 221
Query: 103 ----KDKKQKFGGQMHE-ID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
++ +K + + +D A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 222 YMGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGGTLFEEMGFYHIGPIDGHSFDHLL 281
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV+T+K K P +
Sbjct: 282 PVLRNVRDNAK-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPAY 340
Query: 184 --------LQQTRLFCKI--LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
Q+ L KI + M GTGL+ F P RCFDVGIAEQHAVTFAAGLA
Sbjct: 341 TSVFADALTQEASLDDKIVAITAAMPSGTGLDKFASVHPSRCFDVGIAEQHAVTFAAGLA 400
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDTT++A
Sbjct: 401 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYLA 460
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 461 TLPGFVVM 468
>gi|424915247|ref|ZP_18338611.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
bv. trifolii WSM597]
gi|392851423|gb|EJB03944.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
bv. trifolii WSM597]
Length = 638
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 201/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA+ DL +
Sbjct: 94 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAIAADLDKNDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 RVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRDNAR-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPSY 322
Query: 187 TRLFCK------ILDNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + LD+++ G GTGL+ + FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALVQEATLDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDT F+
Sbjct: 383 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLT 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>gi|150395717|ref|YP_001326184.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium medicae
WSM419]
gi|150027232|gb|ABR59349.1| deoxyxylulose-5-phosphate synthase [Sinorhizobium medicae WSM419]
Length = 637
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 203/368 (55%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L GK+
Sbjct: 91 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAAELDGKSR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSS---------- 102
+VI+VI +GA A M++EA+NNAG L+ + + L+ N A S+
Sbjct: 141 NVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 200
Query: 103 ----KDKKQKFGGQMHE-ID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
++ +K + + +D A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 201 YMGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGGTLFEEMGFYHIGPIDGHSFDHLL 260
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 261 PVLRNVRDNAK-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPAY 319
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F L D++ M GTGL+ F P RCFDVGIAEQHAVTFAAGLA
Sbjct: 320 TSVFADALTLEASLDDKIVAITAAMPSGTGLDRFASVHPSRCFDVGIAEQHAVTFAAGLA 379
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDTT++A
Sbjct: 380 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYLA 439
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 440 TLPGFVVM 447
>gi|15888088|ref|NP_353769.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium fabrum str.
C58]
gi|22095590|sp|Q8UHD7.1|DXS_AGRT5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|15155716|gb|AAK86554.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium fabrum str.
C58]
Length = 639
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAV L G +
Sbjct: 94 IRTLRQEDGLSGFTRRAESEYDDFGAGHSSTSISAGL----------GMAVAAGLDGSDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +G+ A M++EA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 KVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R + + FE+LG Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGGTLFEELGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRD-NQKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPSY 322
Query: 184 --------LQQTRLFCKIL--DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+Q+ L KI+ M GTGL+ + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALIQEATLDEKIIGVTAAMPNGTGLDKMAELFPSRTFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A+G KPFCA+YS+FLQR +DQ+ HDV +Q LPVRF IDRAG VGADGPTH G+FDTTF+A
Sbjct: 383 ADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFLA 442
Query: 294 CLPNMVVM 301
LP MVVM
Sbjct: 443 TLPGMVVM 450
>gi|433612645|ref|YP_007189443.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
GR4]
gi|429550835|gb|AGA05844.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
GR4]
Length = 645
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L GK+
Sbjct: 99 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAAELDGKSR 148
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSS---------- 102
+VI+VI +GA A M++EA+NNAG L+ + + L+ N A S+
Sbjct: 149 NVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 208
Query: 103 ----KDKKQKFGGQMHE-ID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
++ +K + + +D A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 209 YMGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGGTLFEEMGFYHIGPIDGHSFDHLL 268
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV+T+K K P +
Sbjct: 269 PVLRNVRDNAK-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPAY 327
Query: 184 --------LQQTRLFCKI--LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
Q+ L KI + M GTGL+ F P RCFDVGIAEQHAVTFAAGLA
Sbjct: 328 TTVFADALTQEASLDDKIVAITAAMPSGTGLDKFASVHPSRCFDVGIAEQHAVTFAAGLA 387
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDTT++A
Sbjct: 388 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYLA 447
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 448 TLPGFVVM 455
>gi|315498416|ref|YP_004087220.1| deoxyxylulose-5-phosphate synthase [Asticcacaulis excentricus CB
48]
gi|315416428|gb|ADU13069.1| deoxyxylulose-5-phosphate synthase [Asticcacaulis excentricus CB
48]
Length = 640
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 203/370 (54%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+R++RQ GL E+ +D FG H++TSISA L G RD G+ N
Sbjct: 93 IRSLRQGGGLSGFTKRSESPYDPFGAAHAATSISAAL----------GFCAARDHKGETN 142
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
V++VI +G+ A M+YEA+NNA G ++ L L S
Sbjct: 143 KVVAVIGDGSMSAGMAYEAMNNAAETTRNLTVILNDNDMSIAPPVGGMSAYLANLVSGGA 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQM-HEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
++ + + S ++ + +M + + FSR G FFE+LG YY+GP+DGH++++
Sbjct: 203 YQAVRRFGKSVAERLPRALFEMVRKGEEFSRTYVTGG--TFFEELGFYYVGPIDGHDMDN 260
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------------------- 183
L V K+V+ I D VL+HV+T+K K P +
Sbjct: 261 LLSVFKRVRDITDR-PVLVHVVTQKGKGYAPAEAASDKYHGVAKFDVITGEQAKPKANAP 319
Query: 184 ----------LQQTRLFCKI--LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
++Q ++ K+ + M GTGL+ F + FP RC+DVGIAEQHAVTFAAG
Sbjct: 320 SYTEVFAAELIKQAQIDPKVVAITAAMPSGTGLDRFAEVFPTRCYDVGIAEQHAVTFAAG 379
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA+G+KPFCA+YS+FLQR +DQVAHDV LQ LPVRFAIDRAGLVGADG TH G FD +
Sbjct: 380 LAADGMKPFCALYSTFLQRGYDQVAHDVALQDLPVRFAIDRAGLVGADGATHAGTFDIGY 439
Query: 292 MACLPNMVVM 301
+ LP M++M
Sbjct: 440 LGTLPGMMIM 449
>gi|209548170|ref|YP_002280087.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|226801561|sp|B5ZS68.1|DXS_RHILW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|209533926|gb|ACI53861.1| deoxyxylulose-5-phosphate synthase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 638
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 201/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA+ DL +
Sbjct: 94 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAIAADLDKNDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 RVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRDNAR-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPSY 322
Query: 187 TRLFCK------ILDNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + LD+++ G GTGL+ + FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALVQEATLDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDT F+
Sbjct: 383 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLT 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>gi|418404560|ref|ZP_12978014.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
CCNWSX0020]
gi|359501479|gb|EHK74087.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
CCNWSX0020]
Length = 658
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L GK+
Sbjct: 112 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAAELDGKSR 161
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSS---------- 102
+VI+VI +GA A M++EA+NNAG L+ + + L+ N A S+
Sbjct: 162 NVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 221
Query: 103 ----KDKKQKFGGQMHE-ID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
++ +K + + +D A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 222 YMGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGGTLFEEMGFYHIGPIDGHSFDHLL 281
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV+T+K K P +
Sbjct: 282 PVLRNVRDNAK-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPAY 340
Query: 184 --------LQQTRLFCKI--LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
Q+ L KI + M GTGL+ F P RCFDVGIAEQHAVTFAAGLA
Sbjct: 341 TSVFADALTQEASLDDKIVAITAAMPSGTGLDRFASVHPSRCFDVGIAEQHAVTFAAGLA 400
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDTT++A
Sbjct: 401 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYLA 460
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 461 TLPGFVVM 468
>gi|338707067|ref|YP_004661268.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
gi|336293871|gb|AEI36978.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
Length = 649
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 151/370 (40%), Positives = 197/370 (53%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +DAFG HSSTSISA L G A+ L K +
Sbjct: 94 IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAAL----------GFAMASKLSHKKD 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
+++I +G+ A M+YEA+NNA G L+ L RL S+
Sbjct: 144 KAVAIIGDGSMTAGMAYEAMNNAKAAGERLIVILNDNEMSISPPVGALSSYLSRLISSRP 203
Query: 92 FRQLCQEAFSSKDKKQK-FGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
F L ++ K + D ++R + G FE+LG YY+GPVDGHNL+
Sbjct: 204 FMNLRDIMRGVVNRMPKGLAIAARKADEYARGMATG--GTLFEELGFYYVGPVDGHNLDQ 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VL+ V+ D G +L+HV+T K + P + +
Sbjct: 262 LIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAEDKYHAVQRLDVVSGKQAKAPPGPP 320
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D++ M GTGL+ FQ++FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTSVFAERLIKEAQADDKIVAITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA KPFC +YS+FLQR +DQ+ HDV +Q LPVRFA+DRAGLVGADG TH G+FD F
Sbjct: 381 LAAAHYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAF 440
Query: 292 MACLPNMVVM 301
M LPNMVVM
Sbjct: 441 MVNLPNMVVM 450
>gi|408378647|ref|ZP_11176244.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium albertimagni
AOL15]
gi|407747784|gb|EKF59303.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium albertimagni
AOL15]
Length = 639
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 159/377 (42%), Positives = 198/377 (52%), Gaps = 96/377 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L +
Sbjct: 94 IRTLRQEDGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVAAELSKTDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
VI+VI +GA A M+YEA+NNAG L+ L RL S
Sbjct: 144 KVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRS 203
Query: 92 ---FRQLCQEAFSSKDKKQKFGGQMHEID-AFSREIEAG----SRACFFEDLGLYYIGPV 143
FR+L ++ + K +D A +R +E + FE+LG Y+IGP+
Sbjct: 204 YMGFRELGKKLTAYLGKT---------VDRAITRAVEHARGYVTGGTMFEELGFYHIGPI 254
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------- 183
DGH+ E L VL+ V+ G VLIHV+T+K K P +
Sbjct: 255 DGHSFEHLLPVLRNVRDNAK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGTQA 313
Query: 184 -----------------LQQTRLFCKI--LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQH 224
+++ R KI + M GTGL+ Q FP R FDVGIAEQH
Sbjct: 314 KAKPNAPAYTAVFADALVEEARHDEKIVGITAAMPNGTGLDKLQTLFPERTFDVGIAEQH 373
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFAAGLAAEG KPFCA+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH
Sbjct: 374 AVTFAAGLAAEGFKPFCALYSTFLQRGYDQVVHDVGIQGLPVRFPIDRAGFVGADGPTHA 433
Query: 285 GAFDTTFMACLPNMVVM 301
G+FDT F+A LP VVM
Sbjct: 434 GSFDTGFLAALPGFVVM 450
>gi|254456404|ref|ZP_05069833.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
sp. HTCC7211]
gi|207083406|gb|EDZ60832.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
sp. HTCC7211]
Length = 638
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 155/378 (41%), Positives = 200/378 (52%), Gaps = 97/378 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSIS+ L G+A L K +
Sbjct: 92 IRTLRQGNGLSGFTKRSESEYDPFGAAHSSTSISSAL----------GIAEANKLANKTS 141
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKA--------------LKRLHSNP- 90
+VI+VI +GA A M+YEA+NNAG +LN L +L +
Sbjct: 142 NVIAVIGDGAISAGMAYEAMNNAGASKTKMIVILNDNDMSIAKPVGAMRTYLAKLFTGKI 201
Query: 91 --QFRQ---LCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDG 145
FR+ L AFS ++F + + + F R G F LG YY GP+DG
Sbjct: 202 YFSFRETLKLITSAFS-----KRFSAKAGKAEDFLRSAVTG--GTLFSSLGFYYAGPIDG 254
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------------- 179
H+L DL +LK + G ++IHV T+K EKA
Sbjct: 255 HDLNDLIPILKNARDSKHEGPIMIHVKTQKGKGYSYAEKATDNYHGVSKFNVETGEQIKS 314
Query: 180 ---LPLKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQ 223
LP T++F L D++ M GGTG+++F K FP R FDVGIAEQ
Sbjct: 315 ISNLP---AYTKVFANTLVKHAQKDSKIVGITAAMPGGTGMDIFGKEFPKRMFDVGIAEQ 371
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
HAVTF+AGLA EG KP+ AIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH
Sbjct: 372 HAVTFSAGLATEGYKPYAAIYSTFLQRAYDQVVHDVAIQSLPVRFAIDRAGLVGADGSTH 431
Query: 284 CGAFDTTFMACLPNMVVM 301
G+FD T+++ LPN +VM
Sbjct: 432 AGSFDITYLSTLPNFIVM 449
>gi|116250747|ref|YP_766585.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
bv. viciae 3841]
gi|118595610|sp|Q1MKN4.1|DXS_RHIL3 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|115255395|emb|CAK06470.1| putative 1-deoxy-d-xylulose-5-phosphate synthase [Rhizobium
leguminosarum bv. viciae 3841]
Length = 638
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 201/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA+ DL +
Sbjct: 94 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAIAADLDKSDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 RVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRD-NGRGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPSY 322
Query: 187 TRLFCK------ILDNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + LD+++ G GTGL+ + FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALVQEATLDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDT F+
Sbjct: 383 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLT 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>gi|424888383|ref|ZP_18311986.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
bv. trifolii WSM2012]
gi|393173932|gb|EJC73976.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
bv. trifolii WSM2012]
Length = 638
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 201/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA+ DL +
Sbjct: 94 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAIAADLDKSDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 RVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRD-NGRGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPSY 322
Query: 187 TRLFCK------ILDNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + LD+++ G GTGL+ + FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALVQEATLDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDT F+
Sbjct: 383 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLT 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>gi|424898574|ref|ZP_18322148.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
bv. trifolii WSM2297]
gi|393182801|gb|EJC82840.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
bv. trifolii WSM2297]
Length = 638
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 201/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA+ DL +
Sbjct: 94 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAIAADLDKNDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 RVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRD-NGRGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPSY 322
Query: 187 TRLFCK------ILDNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + LD+++ G GTGL+ + FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALVQEATLDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDT F+
Sbjct: 383 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLT 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>gi|307000604|gb|ADN22972.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
Length = 722
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/381 (40%), Positives = 197/381 (51%), Gaps = 94/381 (24%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI Q GL E+ +D FG GH S+SAGL GMAV RD+ G+ N +
Sbjct: 166 TITQKNGLSGFTSRFESEYDPFGAGHGCNSLSAGL----------GMAVCRDINGRKNRI 215
Query: 56 ISVIVEGATIARMSYEAINNAGVLNK------------------------------ALKR 85
++VI T+A YEA+ +AG L+ AL +
Sbjct: 216 VTVISNWTTMAGQVYEAMGHAGFLDSNMVVILNDSCHTLLPKADGGAKMSVNAFSSALSK 275
Query: 86 LHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIG 141
+ S+ FR+ + A K + FG MHE +D ++R + A FE+LGLYYIG
Sbjct: 276 IQSSKGFRRFREAA---KGLAKWFGKGMHEFAAKVDEYARGMIGPHGATLFEELGLYYIG 332
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEK------------------------ 177
P+DG N++DL VLK+V ++ G VL+HVIT E
Sbjct: 333 PIDGRNIDDLICVLKEVASLDSTGPVLVHVITGTENDTGGIIGSEINAVEEGPSNSSPDL 392
Query: 178 -AMLPLKLQQTRLFCKIL--------DNR-------MGGGTGLNLFQKHFPIRCFDVGIA 221
L L +T C + D R MG L LFQ FP R FD+GIA
Sbjct: 393 LKFLGTGLSRTYNDCFVEALTAEAENDKRIVVVHGGMGIDRSLRLFQSRFPDRFFDLGIA 452
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTF+AGLA GLKPFC I S+FLQR +DQ+ DVD+QK+PVRFAI AGLVG++GP
Sbjct: 453 EQHAVTFSAGLACGGLKPFCIIPSTFLQRAYDQIIEDVDMQKIPVRFAITNAGLVGSEGP 512
Query: 282 THCGAFDTTFMACLPNMVVMK 302
T+ G FD TFM+CLPNM+VM
Sbjct: 513 TNSGPFDITFMSCLPNMIVMS 533
>gi|334344767|ref|YP_004553319.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium
chlorophenolicum L-1]
gi|334101389|gb|AEG48813.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium
chlorophenolicum L-1]
Length = 641
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/372 (41%), Positives = 196/372 (52%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ D FG HSSTSISA L G AV + G+
Sbjct: 94 IRTLRQGGGLSGFTKRAESEFDPFGAAHSSTSISAAL----------GFAVANKMQGRPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +G+ A M+YEA+NNA G L+ L RL S+ +
Sbjct: 144 KGIAVIGDGSMSAGMAYEAMNNAREAGNRLIVILNDNDMSIAPPVGGLSAYLARLVSSRE 203
Query: 92 F---RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
F R L + ++ + + D F+R + G FE+LG YY+GP+DGHNL
Sbjct: 204 FLGLRDLAKRL--ARRLPRPLHNAARKTDEFARGMAMG--GTLFEELGFYYVGPIDGHNL 259
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------------------ 184
+ L VL+ V+ + G L+HV+T+K K P +
Sbjct: 260 DQLIPVLENVRDAAE-GPCLVHVVTQKGKGYAPAEAAADKYHGVQKFDVITGTQDKAPPG 318
Query: 185 --QQTRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F K L M GTGL+ F FP R FDVGIAEQHAVTFA
Sbjct: 319 PPSYTGVFAKALIAEAERDPAVCAITAAMPSGTGLDKFGAAFPDRTFDVGIAEQHAVTFA 378
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA+G++PFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 379 AGLAAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDV 438
Query: 290 TFMACLPNMVVM 301
T+++ LPN VVM
Sbjct: 439 TYLSSLPNFVVM 450
>gi|424880292|ref|ZP_18303924.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
bv. trifolii WU95]
gi|392516655|gb|EIW41387.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
bv. trifolii WU95]
Length = 638
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 201/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA+ DL +
Sbjct: 94 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAIAADLDKSDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 RVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRD-NGRGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPSY 322
Query: 187 TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + L D+++ G GTGL+ + FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALVQEAALDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDT F+
Sbjct: 383 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLT 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>gi|67906635|gb|AAY82730.1| predicted 1-deoxy-d-xylulose-5-phosphate synthase [uncultured
bacterium eBACmed86H08]
Length = 635
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/375 (40%), Positives = 199/375 (53%), Gaps = 91/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
++T+RQ GL E+ +D FG HSSTSISA L G+A L K+
Sbjct: 91 IKTLRQGDGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GIATANKLSKKSE 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLN--------------KALKRLHSNPQ 91
+V++VI +GA A M+YEA+NNAG +LN L +L +
Sbjct: 141 NVVAVIGDGAISAGMAYEAMNNAGTSKTKMIVILNDNDMSIAEPVGAMRSYLAKLLTGKI 200
Query: 92 FRQLCQ------EAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDG 145
+ L + AFS ++F + + + F R G F LG YY+GP+DG
Sbjct: 201 YFSLRETFKLIISAFS-----KRFSKKAGKAEDFLRSAVTG--GTLFNSLGFYYVGPIDG 253
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAM-----------------LPLKLQQ-- 186
H+++ L VLK K G ++IHV TEK K + +Q+
Sbjct: 254 HDIDTLVSVLKNAKDTNFEGPIMIHVKTEKGKGYQFAENSKDKYHGVSKFNVQTGVQEKS 313
Query: 187 -------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAV 226
T +F L D++ M GTG++LF K FP R FDVGIAEQHAV
Sbjct: 314 SSKIPSYTSVFANTLIKHAERDSKIIGITAAMPSGTGMDLFAKKFPNRMFDVGIAEQHAV 373
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TF+AGLA EG KP+ AIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADGPTH G+
Sbjct: 374 TFSAGLATEGYKPYAAIYSTFLQRAYDQVVHDVAIQSLPVRFAIDRAGLVGADGPTHAGS 433
Query: 287 FDTTFMACLPNMVVM 301
FD T+++ LPN VVM
Sbjct: 434 FDITYLSTLPNFVVM 448
>gi|222147754|ref|YP_002548711.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium vitis S4]
gi|254782057|sp|B9JSL2.1|DXS_AGRVS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|221734742|gb|ACM35705.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium vitis S4]
Length = 639
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 198/368 (53%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L +
Sbjct: 94 IRTLRQEHGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVAAELGQTDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
VI+VI +GA A M++EA+NNAG L+ + + L+ N A S+ + G
Sbjct: 144 KVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 113 ---MHEID-------------AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
M EI A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 204 YMGMREIGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRDNAK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNTFDVITGTQAKAKPNAPSY 322
Query: 184 --------LQQTRLFCKI--LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+++ RL KI + M GTGL+ Q FP R FDVGIAEQHAVTFAAGLA
Sbjct: 323 TAVFADALVEEARLDDKIVGITAAMPSGTGLDKLQNLFPERTFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPFCA+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDT F+A
Sbjct: 383 AEGYKPFCALYSTFLQRGYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTGFLA 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 SLPGFVVM 450
>gi|402490059|ref|ZP_10836850.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CCGE 510]
gi|401811003|gb|EJT03374.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CCGE 510]
Length = 638
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 199/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA+ DL +
Sbjct: 94 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAIAADLDKSDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSS---------- 102
V++VI +GA A M+YEA+NNAG L+ + + L+ N A S+
Sbjct: 144 RVVAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 103 ----KDKKQKFGGQM-HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+D +K + ID A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDLGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRD-NGRGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPSY 322
Query: 187 TRLFCK------ILDNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + LD+++ G GTGL+ FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALVQEATLDDKIVGITAAMPNGTGLDKLADAFPSRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDT F+
Sbjct: 383 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLT 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>gi|83945404|ref|ZP_00957752.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicaulis sp. HTCC2633]
gi|83851238|gb|EAP89095.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicaulis alexandrii
HTCC2633]
Length = 635
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/367 (41%), Positives = 201/367 (54%), Gaps = 77/367 (20%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG H+STSISAGL G AVGRDL +
Sbjct: 91 IRTLRQGGGLSGFTKRSESDYDPFGAAHASTSISAGL----------GFAVGRDLKHEEG 140
Query: 54 H-VISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQE 98
V++VI +G+ A M+YEA+NNAG + K L + ++ RQ+ +
Sbjct: 141 RKVVAVIGDGSMSAGMAYEAMNNAGDMKKDLIVILNDNDMSIAPPVGAMSHYFARQVSSK 200
Query: 99 AFSSKDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
+++S K + + + +R E R FE++G Y+GP+DGH+++ L
Sbjct: 201 SYNSIRKLGRGVAEALGVKEHARRAEEYLRGMAMGGTLFEEMGFRYVGPIDGHDMDQLVA 260
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLPLKL-----------------QQ---------T 187
VL+ V+ + G +LIH +T+K K P + QQ T
Sbjct: 261 VLRNVRDAGE-GPILIHAVTQKGKGYAPAEAADDKYHGVAKFNVVTGEQQKSKPAAPSYT 319
Query: 188 RLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
+F L D + M GGTG++ F +P R FDVGIAEQHAVTFAAGLAA
Sbjct: 320 GVFANALIQLAETDEKICAVTAAMPGGTGVDKFAAAYPDRAFDVGIAEQHAVTFAAGLAA 379
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EGLKP+ AIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH GAFD +M
Sbjct: 380 EGLKPYAAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGAFDVGYMGA 439
Query: 295 LPNMVVM 301
LP MV+M
Sbjct: 440 LPGMVLM 446
>gi|422294553|gb|EKU21853.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nannochloropsis gaditana
CCMP526]
Length = 842
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 152/381 (39%), Positives = 203/381 (53%), Gaps = 90/381 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKN- 52
M ++RQT GL E+ +DAFG GHSSTSISA L GM+VG+ L K
Sbjct: 206 MHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSISAAL----------GMSVGKLLTNKRV 255
Query: 53 NHVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQF------------------- 92
N+ ++VI +GA M++EA+NNAG L ++ + L+ N Q
Sbjct: 256 NNCVAVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALS 315
Query: 93 ----RQLCQEAFS-----SKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIG 141
R L + F +K + ++ +I+A E G FE+LG YYIG
Sbjct: 316 SYTSRLLSSKPFQDFRSFAKGLNRLMPSEIQDINAKLDEYARGLIQGGTLFEELGFYYIG 375
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAM---------------------- 179
PVDGH+L++L +L+ ++ P VL+HV TEK
Sbjct: 376 PVDGHDLDNLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAEVASDKYHGVAKFDVSTGR 435
Query: 180 --------LPLKLQQT--RLFCKI---------LDNRMGGGTGLNLFQKHFPIRCFDVGI 220
PL L T C+I + M GGTG+++F K FP R FDVGI
Sbjct: 436 QFKGGNKGAPLSLTTTFANALCEIAAEDRTVVGITAAMPGGTGMDIFGKRFPKRTFDVGI 495
Query: 221 AEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADG 280
AEQHAVTFAAG+A EGLKPFC IYS+F+QR +DQV HDV +QKLPVR +DRAGLVG DG
Sbjct: 496 AEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQVIHDVVIQKLPVRMILDRAGLVGNDG 555
Query: 281 PTHCGAFDTTFMACLPNMVVM 301
PTH G+FD +++ LP++V+M
Sbjct: 556 PTHHGSFDLSYLGALPDIVIM 576
>gi|85703103|ref|ZP_01034207.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. 217]
gi|85672031|gb|EAQ26888.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. 217]
Length = 643
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 160/372 (43%), Positives = 200/372 (53%), Gaps = 82/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGK-- 51
+RT+RQ GL E+ +D FG HSSTSISA L G AV RDL G
Sbjct: 95 IRTLRQKDGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGGNCP 144
Query: 52 --NNHVISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQK 108
I+VI +GA A M++EA+NNAG L K L L+ N A SS +
Sbjct: 145 SGLGDAIAVIGDGAMSAGMAFEAMNNAGHLKKRLIVILNDNEMSIAPPVGALSSYLSRLY 204
Query: 109 FGGQMHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNL 148
G + A ++ + G+R FE+LG Y+GP+DGH+L
Sbjct: 205 AGEPFQDFKAAAKGAISLLPPPFQEGARRAKDMLKGLTVGGTLFEELGFSYLGPIDGHDL 264
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
L VL+ VKA + G +LIHV+T+K K P + +
Sbjct: 265 HQLLPVLRTVKARAN-GPILIHVLTKKGKGYGPAERARDGGHATAKFDVLTGEQRKSPSN 323
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F K L D++ M GTGLNLF + +P R FDVGIAEQHAVTF+
Sbjct: 324 APSYTSVFAKALLAHAGQDDKICAVTAAMPDGTGLNLFAERYPSRLFDVGIAEQHAVTFS 383
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH GAFDT
Sbjct: 384 AGLAAGGMKPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFDT 443
Query: 290 TFMACLPNMVVM 301
F+A LP VVM
Sbjct: 444 AFLANLPGFVVM 455
>gi|103487835|ref|YP_617396.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingopyxis alaskensis
RB2256]
gi|118595621|sp|Q1GQK9.1|DXS_SPHAL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|98977912|gb|ABF54063.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Sphingopyxis alaskensis
RB2256]
Length = 642
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 195/370 (52%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G A+ L +
Sbjct: 94 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GFAIANKLKDEPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +G+ A M+YEA+NNA G L+ L +L S+
Sbjct: 144 RAIAVIGDGSMSAGMAYEAMNNAKQAGNRLIVILNDNDMSIAPPVGGLSAYLAKLVSSRP 203
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
F +L + A ++ + + D ++R + G FE+LG YY+GP+DGHNL+
Sbjct: 204 FLELREIARRFARKLPEPLHKAAKKTDEYARGMAMG--GTLFEELGFYYVGPIDGHNLDH 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPL---------------------------- 182
L +L+ V+ D G VLIH +T+K K P
Sbjct: 262 LIPILENVRD-SDHGPVLIHAVTKKGKGYAPAEAAADKYHGVQKFDVITGEQAKAPPGPP 320
Query: 183 -----------KLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
KL +T + M GTG++ F K P R FDVGIAEQHAVTFAAG
Sbjct: 321 AYQNVFGETLAKLAETDKRIVAITAAMPSGTGVDKFAKVHPDRSFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA+G++PF AIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD T+
Sbjct: 381 LAAQGMRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDITY 440
Query: 292 MACLPNMVVM 301
+A LPNMVVM
Sbjct: 441 LATLPNMVVM 450
>gi|241203354|ref|YP_002974450.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240857244|gb|ACS54911.1| deoxyxylulose-5-phosphate synthase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 638
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 201/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA+ DL +
Sbjct: 94 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAIAADLDKSDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 RVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRD-NGRGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPSY 322
Query: 187 TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + L D+++ G GTGL+ + +P RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALVQEAALDDKIVGITAAMPNGTGLDKLAEAYPSRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDT F+
Sbjct: 383 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLT 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>gi|188584012|ref|YP_001927457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium populi
BJ001]
gi|179347510|gb|ACB82922.1| deoxyxylulose-5-phosphate synthase [Methylobacterium populi BJ001]
Length = 658
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 158/382 (41%), Positives = 196/382 (51%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL----- 48
+RT+RQ GL E+V+D FG HSSTSISA L GMAV RDL
Sbjct: 93 IRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAAL----------GMAVARDLDDAEA 142
Query: 49 ------LGKNNHVISVIVEGATIARMSYEAINNAGVLNKAL------------------- 83
GK ++I+VI +G+ A M+YEA+NNAG L+ L
Sbjct: 143 RAKGEAPGKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDNDMSIAPPVGAMS 202
Query: 84 ---KRLHSNPQFRQLCQEA--FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLY 138
RL S +R L + A K + + I G FE++G +
Sbjct: 203 AYLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG--TMFEEMGFH 260
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------ 186
Y+GPVDGHNL+ L VLK V+ D G +L+HV+T+K K P +
Sbjct: 261 YVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVV 319
Query: 187 --------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
TR+F + L D + M GGTG++LF K P + FDVG
Sbjct: 320 SGVQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDKTFDVG 379
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG KPF AIYS+FLQR +DQV HDV LQ L VRF +DRAGLVGAD
Sbjct: 380 IAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGAD 439
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
G TH GAFD ++ CLPNM VM
Sbjct: 440 GATHAGAFDLAYLCCLPNMTVM 461
>gi|145334377|ref|NP_001078570.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana]
gi|110742752|dbj|BAE99284.1| 1-D-deoxyxylulose 5-phosphate synthase - like protein [Arabidopsis
thaliana]
gi|332004287|gb|AED91670.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana]
Length = 565
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/349 (40%), Positives = 192/349 (55%), Gaps = 67/349 (19%)
Query: 7 TCGLENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIA 66
T LE+ +D+FG GH SISAGL G+AV RD+ GK + V++VI A
Sbjct: 175 TSRLESEYDSFGTGHGCNSISAGL----------GLAVARDMKGKRDRVVAVIDNVTITA 224
Query: 67 RMSYEAINNAG--------VLNKALKRLHSNPQ----------------------FRQLC 96
+YEA++NAG +LN + LH N + FR+
Sbjct: 225 GQAYEAMSNAGYLDSNMIVILNDSRHSLHPNMEEGSKASISALSSIMSKIQSSKVFRKFR 284
Query: 97 QEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLA 152
+ A K ++ G M+E +D ++R + + + FE+LGLYYIGPVDGHN+EDL
Sbjct: 285 ELA---KAMTKRIGKGMYEWAAKVDEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLV 341
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK---LQQTRLFCK----------------- 192
VL++V ++ G VL+HVITE + +K ++ R +
Sbjct: 342 CVLREVSSLDSMGPVLVHVITEGNRDAETVKNIMVKDRRTYSDCFVEALVMEAEKDRDIV 401
Query: 193 ILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCF 252
++ M L FQ+ FP R F+VG+AEQHAVTF+AGL++ GLKPFC I S+FLQR +
Sbjct: 402 VVHAGMEMDPSLLTFQERFPDRFFNVGMAEQHAVTFSAGLSSGGLKPFCIIPSAFLQRAY 461
Query: 253 DQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DQV HDVD Q+ VRF I AGLVG+DGP CGAFD FM+ LPNM+ M
Sbjct: 462 DQVVHDVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLPNMIAM 510
>gi|325292127|ref|YP_004277991.1| Deoxyxylulose-5-phosphate synthase [Agrobacterium sp. H13-3]
gi|325059980|gb|ADY63671.1| Deoxyxylulose-5-phosphate synthase [Agrobacterium sp. H13-3]
Length = 636
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAV L +
Sbjct: 91 IRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSISAGL----------GMAVAAGLDQSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +G+ A M++EA+NNAG L+ + + L+ N A S+ +
Sbjct: 141 KVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 200
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R + + FE+LG Y+IGP+DGH+ + L
Sbjct: 201 YMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGGTLFEELGFYHIGPIDGHSFDHLL 260
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 261 PVLRNVRD-NQKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPSY 319
Query: 187 TRLFCK------ILDNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + LD++ M GTGL+ + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 320 TSVFAEALIQEATLDDKIIGVTAAMPNGTGLDKMAELFPARTFDVGIAEQHAVTFAAGLA 379
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A+G KPFCA+YS+FLQR +DQ+ HDV +Q LPVRF IDRAG VGADGPTH G+FDTTF+A
Sbjct: 380 ADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFLA 439
Query: 294 CLPNMVVM 301
LP MVVM
Sbjct: 440 TLPGMVVM 447
>gi|254438285|ref|ZP_05051779.1| 1-deoxy-D-xylulose-5-phosphate synthase [Octadecabacter antarcticus
307]
gi|198253731|gb|EDY78045.1| 1-deoxy-D-xylulose-5-phosphate synthase [Octadecabacter antarcticus
307]
Length = 630
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 156/366 (42%), Positives = 195/366 (53%), Gaps = 76/366 (20%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G AV RDL G+
Sbjct: 89 IRTLRQKDGLSGFTKRSESPYDCFGAAHSSTSISAAL----------GFAVARDLGGEGG 138
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
I+VI +GA A M+YEA+NNAG L K L L+ N A SS + G
Sbjct: 139 DAIAVIGDGAMSAGMAYEALNNAGHLKKRLIVILNDNEMSIAPPVGAMSSYLSRLYAGDP 198
Query: 113 MHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDLA 152
E A ++ ++ G+R FE+LG Y+GP+DGH++E L
Sbjct: 199 FQEFKAAAKGAVSFLPEPLQEGARRAKDMLKHMTVGGTLFEELGFSYLGPIDGHDMEQLL 258
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------TR 188
VL+ VK I G +LIHVIT+K K + + T
Sbjct: 259 SVLRTVK-IRATGPILIHVITKKGKGYAENRADRGHATAKFDVVTGEQKKTPSNAPSYTS 317
Query: 189 LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAE 235
+F + L D++ M GTGL+ F F RCFDVGIAEQH VTF AGLAA
Sbjct: 318 VFAESLIKHATKDDKIVAVTAAMPDGTGLDRFMSRFASRCFDVGIAEQHGVTFCAGLAAG 377
Query: 236 GLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACL 295
G+KPFC IYS+FLQR +DQ+ HDV +Q+LPVRFAIDRAGLVGADG TH G+FD F+A L
Sbjct: 378 GMKPFCTIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLANL 437
Query: 296 PNMVVM 301
P VVM
Sbjct: 438 PGFVVM 443
>gi|417859093|ref|ZP_12504150.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens
F2]
gi|338825097|gb|EGP59064.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens
F2]
Length = 636
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAV L +
Sbjct: 91 IRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSISAGL----------GMAVAAGLDESDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +G+ A M++EA+NNAG L+ + + L+ N A S+ +
Sbjct: 141 KVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 200
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R + + FE+LG Y+IGP+DGH+ + L
Sbjct: 201 YMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGGTLFEELGFYHIGPIDGHSFDHLL 260
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 261 PVLRNVRD-NQKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPSY 319
Query: 187 TRLFCK------ILDNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + LD++ M GTGL+ + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 320 TSVFAEALIQEATLDDKIIGVTAAMPNGTGLDKMAELFPSRTFDVGIAEQHAVTFAAGLA 379
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A+G KPFCA+YS+FLQR +DQ+ HDV +Q LPVRF IDRAG VGADGPTH G+FDTTF+A
Sbjct: 380 ADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFLA 439
Query: 294 CLPNMVVM 301
LP MVVM
Sbjct: 440 TLPGMVVM 447
>gi|146278064|ref|YP_001168223.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
ATCC 17025]
gi|145556305|gb|ABP70918.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
ATCC 17025]
Length = 648
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 151/368 (41%), Positives = 191/368 (51%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRT+RQ GL E+ +D FG HSSTSISA L G A+GR+L
Sbjct: 97 MRTLRQKGGLSGFTKRSESDYDPFGAAHSSTSISAAL----------GFAMGRELGQPVG 146
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK------------------ALKRLHSNPQFRQL 95
I+VI +G+ A M+YEA+N+AG LNK AL R N +
Sbjct: 147 DTIAVIGDGSITAGMAYEALNHAGHLNKRLFVILNDNDMSIAPPVGALARYLVNLSSKAP 206
Query: 96 CQEAFSSKDK-KQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLEDLA 152
++ D + G + + +R++ G FE+LG Y+GP+DGH++ L
Sbjct: 207 FATLRAAADGIESALPGPLRDGARRARQLVTGMPGGGTLFEELGFTYVGPIDGHDMPSLL 266
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------------------LQQ 186
L+ +A G VLIHV+T K K P +
Sbjct: 267 QTLRAARARTT-GPVLIHVVTRKGKGYAPAENAPDKYHGVNKFDPVTGEQKKSVANAPNY 325
Query: 187 TRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F L + M GTG+++ QK FP R FDVGIAEQHAVTFAAGLA
Sbjct: 326 TKVFGTTLTDEAARDPRIVAITAAMPSGTGVDIMQKRFPNRVFDVGIAEQHAVTFAAGLA 385
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
G+KPFCAIYSSFLQR +DQ+AHDV LQ LPVRF IDRAGLVGADG TH GAFD F+
Sbjct: 386 GAGMKPFCAIYSSFLQRGYDQIAHDVALQNLPVRFVIDRAGLVGADGATHAGAFDVGFLT 445
Query: 294 CLPNMVVM 301
LPN+ VM
Sbjct: 446 TLPNLTVM 453
>gi|418406285|ref|ZP_12979604.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens
5A]
gi|358006778|gb|EHJ99101.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens
5A]
Length = 639
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAV L +
Sbjct: 94 IRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSISAGL----------GMAVAAGLDQSDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +G+ A M++EA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 KVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R + + FE+LG Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGGTLFEELGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRD-NQKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPSY 322
Query: 187 TRLFCK------ILDNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + LD++ M GTGL+ + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALIQEATLDDKIIGVTAAMPNGTGLDKMAELFPARTFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A+G KPFCA+YS+FLQR +DQ+ HDV +Q LPVRF IDRAG VGADGPTH G+FDTTF+A
Sbjct: 383 ADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFLA 442
Query: 294 CLPNMVVM 301
LP MVVM
Sbjct: 443 TLPGMVVM 450
>gi|334341585|ref|YP_004546565.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum ruminis DSM
2154]
gi|334092939|gb|AEG61279.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum ruminis DSM
2154]
Length = 636
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 202/378 (53%), Gaps = 101/378 (26%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+VHDAFG GHSSTSISA L GMA+ RDL G+ V
Sbjct: 91 TLRQYGGISGFPRPDESVHDAFGTGHSSTSISAAL----------GMALARDLKGEEYSV 140
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQFR 93
++VI +G+ M++EA+N+AG L K L RL ++P++
Sbjct: 141 VAVIGDGSMTGGMAFEALNHAGHLQKNLIVVLNDNEMSIAPNVGALSGYLSRLRTDPKY- 199
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----------ACFFEDLGLYYIGP 142
+ SKD+ +H+I ++ ++ R FFE+LG Y+GP
Sbjct: 200 ------YRSKDEIADL---LHKIPHGAKLLKVVDRLKDGLKYLVVPGMFFEELGFTYLGP 250
Query: 143 VDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------- 186
VDGH+L+ + +L+Q K+ P VL+HV+T+K + P +
Sbjct: 251 VDGHDLKAVMTLLQQAKSANGP--VLVHVLTQKGRGYKPAESNPDRFHGVGPFDVETGNI 308
Query: 187 ----------TRLFCKIL-----DNR--------MGGGTGLNLFQKHFPIRCFDVGIAEQ 223
T +F K L DN M GGTGLNLF K +P R FDVGIAEQ
Sbjct: 309 KKAEGGPPSYTEVFGKTLVKLARDNEKIVGITAAMPGGTGLNLFAKEYPARYFDVGIAEQ 368
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
HA+T AAGLAA G +P AIYS+F+QR +DQV HDV LQ LPV FA+DRAGLVG DGPTH
Sbjct: 369 HAITMAAGLAASGYRPVTAIYSTFMQRAYDQVLHDVCLQNLPVTFALDRAGLVGDDGPTH 428
Query: 284 CGAFDTTFMACLPNMVVM 301
G FD +F+ +PN+V++
Sbjct: 429 HGVFDLSFLRNIPNLVIV 446
>gi|37903541|gb|AAP56243.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens]
Length = 639
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 203/368 (55%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAV L +
Sbjct: 94 IRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSISAGL----------GMAVAAGLDESDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +G+ A M++EA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 KVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R + + FE+LG Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGGTLFEELGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRD-NQKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPSY 322
Query: 187 TRLFCK------ILDNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + LD+++ G GTGL+ + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALIQEATLDDKIVGVTAAMPNGTGLDKMAELFPSRTFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A+G KPFCA+YS+FLQR +DQ+ HDV +Q LPVRF IDRAG VGADGPTH G+FDTTF+A
Sbjct: 383 ADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFLA 442
Query: 294 CLPNMVVM 301
LP MVVM
Sbjct: 443 TLPGMVVM 450
>gi|159045834|ref|YP_001534628.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dinoroseobacter shibae DFL
12]
gi|157913594|gb|ABV95027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dinoroseobacter shibae DFL
12]
Length = 643
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 159/372 (42%), Positives = 193/372 (51%), Gaps = 82/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISA L G AV RDL G
Sbjct: 94 IRTLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGGAPE 143
Query: 54 H----VISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQK 108
H I+VI +GA A M++EA+NNAG L K L L+ N A SS +
Sbjct: 144 HGIGDAIAVIGDGAISAGMAFEALNNAGHLKKRLIVILNDNEMSIAPPTGAMSSYLNRLY 203
Query: 109 FGGQMHEIDAFSREI---------EAGSRA-----------CFFEDLGLYYIGPVDGHNL 148
G E A ++ E RA FE+LG Y+GP+DGH++
Sbjct: 204 AGAPFQEFKAAAKGAVSLLPPPFQEGAKRAKDILKHMTIGGTLFEELGFSYVGPIDGHDM 263
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK------------------------- 183
E L VL+ VKA D G +LIH IT+K K P +
Sbjct: 264 EQLLSVLRTVKARAD-GPILIHAITKKGKGYAPAEGAADKGHATAKFDVVSGAQKKAPSN 322
Query: 184 -LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F + L D+R M GTGL+ F K F R FDV IAEQH VTF
Sbjct: 323 APTYTNVFAETLIDEAERDSRIVAVTAAMPSGTGLDKFAKRFAARTFDVAIAEQHGVTFC 382
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA G+KPFC +YS+FLQR +DQV HDV LQ LPVRFAIDRAGLVGADG TH GA+DT
Sbjct: 383 AGLAAGGMKPFCTMYSTFLQRGYDQVVHDVALQNLPVRFAIDRAGLVGADGATHAGAYDT 442
Query: 290 TFMACLPNMVVM 301
+++ LPNMVVM
Sbjct: 443 AYLSNLPNMVVM 454
>gi|374639397|gb|AEZ55687.1| putative 1-deoxy-D-xylulose 5-phosphate synthase precursor [Salvia
miltiorrhiza]
Length = 713
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 192/358 (53%), Gaps = 78/358 (21%)
Query: 12 NVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSYE 71
N +D FG GH +SIS+GL GMAV RD+ GK + ++SVI T+A YE
Sbjct: 176 NEYDPFGAGHGCSSISSGL----------GMAVARDIKGKRDRIVSVISNETTMAGQVYE 225
Query: 72 AINNAGVLNKAL-----KRLHS-NPQFRQLCQ---EAFSSKDKK---------------- 106
A++NAG L+ + R HS NP+ Q + A SS K
Sbjct: 226 AMSNAGYLDSNMVVILNDRHHSSNPKLDQAPKASINAVSSTLSKLQSSQFFRKFREVAKV 285
Query: 107 --QKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKA 160
++ G MHE ID ++R + + FE+LGLYYIGPVDGHN+EDL VL +V +
Sbjct: 286 LTKRIGRGMHEWAAKIDEYARGMVGPPGSTLFEELGLYYIGPVDGHNIEDLLCVLHEVAS 345
Query: 161 IPDPGAVLIHVITEKEKAML--------------PLKLQQTRL----------FCKILDN 196
+ G VL+HV+T++E A+ P ++ + F K L
Sbjct: 346 LDSMGPVLVHVVTKEEYAVEDNQMGKVSEECVEGPFTIEAAPIRSRPQTYSDHFAKALIT 405
Query: 197 R-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAI 243
MG T + R FDVG+AEQHAVTF+AGLA GLKPFC I
Sbjct: 406 EAEIDEDIVVVHAGMGMETSFRALKDKLRDRFFDVGMAEQHAVTFSAGLACGGLKPFCII 465
Query: 244 YSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
+SFLQR +DQV HDVD QK+PVRF + AGLVG+DG TH GAFD TFM+CLPNM+VM
Sbjct: 466 PASFLQRAYDQVVHDVDRQKIPVRFVLTSAGLVGSDGATHSGAFDITFMSCLPNMIVM 523
>gi|112950411|gb|ABI26724.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens]
Length = 639
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAV L +
Sbjct: 94 IRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSISAGL----------GMAVAAGLDESDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +G+ A M++EA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 KVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R + + FE+LG Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGGTLFEELGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRD-NQKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPSY 322
Query: 187 TRLFCK------ILDNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + LD++ M GTGL+ + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALIQEATLDDKIIGVTAAMPNGTGLDKMAELFPSRTFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A+G KPFCA+YS+FLQR +DQ+ HDV +Q LPVRF IDRAG VGADGPTH G+FDTTF+A
Sbjct: 383 ADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFLA 442
Query: 294 CLPNMVVM 301
LP MVVM
Sbjct: 443 TLPGMVVM 450
>gi|254561124|ref|YP_003068219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
extorquens DM4]
gi|254268402|emb|CAX24359.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
thiamin-binding [Methylobacterium extorquens DM4]
Length = 660
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 158/382 (41%), Positives = 195/382 (51%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL----- 48
+RT+RQ GL E+ +D FG HSSTSISA L GMAV RDL
Sbjct: 96 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GMAVARDLEEADA 145
Query: 49 ------LGKNNHVISVIVEGATIARMSYEAINNAGVLNKAL------------------- 83
K ++I+VI +G+ A M+YEA+NNAG L+ L
Sbjct: 146 KAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDNDMSIAPPVGAMS 205
Query: 84 ---KRLHSNPQFRQLCQEA--FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLY 138
RL S +R L + A K + + I G FE++G +
Sbjct: 206 AYLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG--TMFEEMGFH 263
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------ 186
Y+GPVDGHNL+ L VLK V+ D G +L+HV+T+K K P +
Sbjct: 264 YVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVV 322
Query: 187 --------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
TR+F + L D + M GGTG++LF K P R FDVG
Sbjct: 323 SGVQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVG 382
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG KPF AIYS+FLQR +DQV HDV LQ LPVRF +DRAGLVGAD
Sbjct: 383 IAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLDRAGLVGAD 442
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
G TH GAFD ++ CLPNM VM
Sbjct: 443 GATHAGAFDLAYLCCLPNMTVM 464
>gi|418296460|ref|ZP_12908303.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens
CCNWGS0286]
gi|355538635|gb|EHH07877.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens
CCNWGS0286]
Length = 639
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 201/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMAV L +
Sbjct: 94 IRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSISAGL----------GMAVAAGLDESDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +G+ A M++EA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 KVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R + + FE+LG Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGGTLFEELGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK----------------------------- 183
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRD-NQKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPSY 322
Query: 184 --------LQQTRLFCKIL--DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+Q+ L KI+ M GTGL+ + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALIQEATLDDKIIGVTAAMPNGTGLDKMAELFPSRTFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A+G KPFCA+YS+FLQR +DQ+ HDV +Q LPVRF IDRAG VGADGPTH G+FDTTF+A
Sbjct: 383 ADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFLA 442
Query: 294 CLPNMVVM 301
LP MVVM
Sbjct: 443 TLPGMVVM 450
>gi|297807177|ref|XP_002871472.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis lyrata
subsp. lyrata]
gi|297317309|gb|EFH47731.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis lyrata
subsp. lyrata]
Length = 701
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 193/352 (54%), Gaps = 73/352 (20%)
Query: 7 TCGLENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIA 66
T LE+ +D+FG GH S SAGL G+AV RD+ GK + V++VI A
Sbjct: 176 TSQLESEYDSFGTGHGCNSTSAGL----------GLAVARDIKGKRDRVVAVIDNATITA 225
Query: 67 RMSYEAINNAG--------VLNKALKRLHSNPQ-------------------------FR 93
+YEA++NAG +LN + LH N + FR
Sbjct: 226 GQAYEAMSNAGYLDSNMIVILNDSRHSLHPNMEEGSKASISALSSIMSKIQSSKIFRKFR 285
Query: 94 QLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+L +K ++ G M+E +D ++R + + + FE+LGLYYIGPVDGHN+E
Sbjct: 286 EL------AKSMTKRIGKGMYEWAAKVDEYARGMVGPTGSTLFEELGLYYIGPVDGHNIE 339
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAM-----LPLKLQQTRLFC------------- 191
DL VL++V ++ G VL+HVITE+ + + +K ++T C
Sbjct: 340 DLVCVLREVSSLDSMGPVLVHVITEENRDAETGKNIMVKDRRTYSDCFVEALVMEAEKDR 399
Query: 192 --KILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQ 249
++ M L FQ+ FP R F+VG+AEQHAVTF+AGL++ GLKPFC I S+FLQ
Sbjct: 400 DIVVVHAGMEMDASLITFQERFPDRFFNVGMAEQHAVTFSAGLSSGGLKPFCIIPSAFLQ 459
Query: 250 RCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
R +DQV HDVD Q+ VRF I AGLVG+DGP CGAFD FM+ LPNM+ M
Sbjct: 460 RAYDQVVHDVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLPNMIAM 511
>gi|323447373|gb|EGB03297.1| hypothetical protein AURANDRAFT_59650 [Aureococcus anophagefferens]
Length = 660
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 149/391 (38%), Positives = 199/391 (50%), Gaps = 105/391 (26%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGK-N 52
M T+RQ GL E+ +DAFG GHSSTSISA L GM+VG+ G+
Sbjct: 76 MGTLRQQDGLSGFQKRAESEYDAFGAGHSSTSISAAL----------GMSVGKSQKGRAQ 125
Query: 53 NHVISVIVEGATIARMSYEAINNA--------------------------------GVLN 80
N+ I+VI +GA M++EA+NNA G L+
Sbjct: 126 NNCIAVIGDGAITGGMAFEAMNNANYLQARMITVLNDNGQVSLPTGTPSAGGVIPSGALS 185
Query: 81 KALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH----EIDAFSREIEAGSRACFFEDLG 136
RL S+ F Q A K F ++ +ID ++R I G FE+LG
Sbjct: 186 AYTSRLISSKPFADFRQVA---KGISSLFPSEIQAINAKIDEYARGIVTG--GTLFEELG 240
Query: 137 LYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL------- 189
YYIGPVDGH+LE+L +L+ ++ P VL+H+ TEK P ++
Sbjct: 241 FYYIGPVDGHDLENLVPILENLRDTPSNKPVLLHIKTEKGYGYAPAMQASDKMHGVAKFD 300
Query: 190 ------------------------------FCKILDNR---------MGGGTGLNLFQKH 210
C++ + M GGTG+++F +
Sbjct: 301 VATGKQFKGAPPAPGAPPKPASLTTIFANELCRLAEKDRDVIGITAAMPGGTGMDIFGRR 360
Query: 211 FPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAI 270
FP R +DVGIAEQHAVTFAAGLA EGLKPFC IYS+F+QR +DQ+ HDV +Q LPVRF +
Sbjct: 361 FPKRTYDVGIAEQHAVTFAAGLAVEGLKPFCCIYSTFMQRGYDQLVHDVVIQDLPVRFIL 420
Query: 271 DRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DRAGLVG DGPTH G+FD T++ C+P +V+M
Sbjct: 421 DRAGLVGNDGPTHHGSFDLTYLGCMPGLVIM 451
>gi|372281821|ref|ZP_09517857.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola sp. S124]
Length = 641
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 159/375 (42%), Positives = 195/375 (52%), Gaps = 88/375 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKN- 52
+RT+RQ GL E+ +D FG HSSTSISA L G AV RDL G+
Sbjct: 94 IRTLRQKGGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGGQLP 143
Query: 53 ---NHVISVIVEGATIARMSYEAINNAGVLNKA----------------------LKRLH 87
I+VI +GA A M++EA+NNAG L K L RL+
Sbjct: 144 EGLGDAIAVIGDGAMSAGMAFEAMNNAGHLGKRMIVILNDNEMSIAPPVGALSNYLSRLY 203
Query: 88 SNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR--ACFFEDLGLYYIGPVDG 145
+ F + A K E ++E+ G FE+LG Y+GP+DG
Sbjct: 204 AGDPFHSFKEAA---KGAVSLLPPPFQEGAKRAKEMLKGIAVGGTLFEELGFSYLGPLDG 260
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR----------------- 188
H++ L VL+ VKA G VLIHV+T+K K P + R
Sbjct: 261 HDMGQLLPVLRTVKARAT-GPVLIHVVTKKGKGYAPAETASDRGHATAKFDVPSGKQKKA 319
Query: 189 ---------LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAV 226
+F + L D+R M GTGL L + FP RCFDVGIAEQH V
Sbjct: 320 PSNAPSYTSVFGEELVRLAAEDSRICAVTAAMPDGTGLQLMDQRFPSRCFDVGIAEQHGV 379
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFAAGLAA G++PFCAIYS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH G+
Sbjct: 380 TFAAGLAAGGMRPFCAIYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGS 439
Query: 287 FDTTFMACLPNMVVM 301
FD FMA LP MVVM
Sbjct: 440 FDVAFMANLPGMVVM 454
>gi|399076032|ref|ZP_10751806.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter sp. AP07]
gi|398037908|gb|EJL31084.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter sp. AP07]
Length = 638
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 149/370 (40%), Positives = 201/370 (54%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG H++TSISA L G RD G++N
Sbjct: 92 IRTLRQGGGLSGFTKRAESEYDPFGAAHAATSISAAL----------GFCAARDAKGESN 141
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
VI+VI +G+ A M+YEA+N A G ++ L L S
Sbjct: 142 SVIAVIGDGSMSAGMAYEAMNAAVDTTKRLIVILNDNDMSIAPPVGGMSAYLANLVSGGA 201
Query: 92 FRQLCQEAFSSKDK-KQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R++ + + +K + + ++R + G FFE+LG +Y+GP+DGH+++
Sbjct: 202 YRKVRKLGKTVVEKLPSPIRDAARKAEEYARGMVTGG--TFFEELGFHYVGPIDGHDMDA 259
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLP----------------LKLQQ-------- 186
L VL K D VL+HV+T+K K P + QQ
Sbjct: 260 LVSVLNNAKHF-DEKPVLVHVVTQKGKGYAPAEGADDKLHAVVKFDVVTGQQHKAAAGPP 318
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T++F + L D++ M GTGL+LF K +P R FDVGIAEQHAVTFAAG
Sbjct: 319 SYTKVFAQELIKHAAVDDKIVAITAAMPSGTGLDLFGKAYPHRTFDVGIAEQHAVTFAAG 378
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA+G+KPF AIYS+FLQR +DQV HDV +Q+LPVRFA+DRAGLVGADGPTH G FD F
Sbjct: 379 LAADGMKPFAAIYSTFLQRGYDQVVHDVAIQRLPVRFAMDRAGLVGADGPTHAGTFDLGF 438
Query: 292 MACLPNMVVM 301
M LP MV+M
Sbjct: 439 MGALPGMVLM 448
>gi|393723890|ref|ZP_10343817.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. PAMC
26605]
Length = 641
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 152/372 (40%), Positives = 196/372 (52%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISA L G V + K
Sbjct: 94 IRTLRMGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GFGVANKIADKPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L R+ S+ +
Sbjct: 144 KGIAVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDNDMSIAPPVGGLSAYLSRIVSSRE 203
Query: 92 F---RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
F R L ++ +K + M + + F+R + G FE+LG YY+GP+DGHNL
Sbjct: 204 FLGFRDLARKL--AKRLPKPIADGMRKTEEFARGMAMG--GTLFEELGFYYVGPIDGHNL 259
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------------------ 184
+ L VL+ V+ + G +L+HV+T+K K P +
Sbjct: 260 DQLIPVLENVRDAEE-GPILVHVVTKKGKGYAPAEAAADKYHGVQKFDVISGVQTKAPPG 318
Query: 185 --QQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
Q +F L M GTGL+ F K P R FDVGIAEQHAVTFA
Sbjct: 319 PPQYQNVFGAQLSKEAETDPRICAITAAMPSGTGLDAFAKAHPERFFDVGIAEQHAVTFA 378
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA+G++PFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 379 AGLAAQGMRPFCAIYSTFLQRAYDQVVHDVCIQNLPVRFAIDRAGLVGADGATHAGSFDL 438
Query: 290 TFMACLPNMVVM 301
++A LPNMVVM
Sbjct: 439 AYLATLPNMVVM 450
>gi|89052661|ref|YP_508112.1| 1-deoxy-D-xylulose-5-phosphate synthase [Jannaschia sp. CCS1]
gi|118595486|sp|Q28W25.1|DXS2_JANSC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
synthase 2; Short=DXPS 2
gi|88862210|gb|ABD53087.1| 1-deoxy-D-xylulose-5-phosphate synthase [Jannaschia sp. CCS1]
Length = 636
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 160/368 (43%), Positives = 196/368 (53%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G A +DL
Sbjct: 93 IRTLRQKDGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GFAAAQDLGEATG 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQ--EAFSSKD- 104
I+VI +G+ A M+YEA+NNAG L K L + P + + S+K
Sbjct: 143 DGIAVIGDGSISAGMAYEALNNAGDLGKRLFVILNDNEMSIAPPVGAMSKYLTDLSAKSP 202
Query: 105 ----KKQKFGGQMHEIDAF------SREIEAGSR--ACFFEDLGLYYIGPVDGHNLEDLA 152
K G H + +RE+ G + A FE LG YIGPVDGH++E+L
Sbjct: 203 LATLKDIADGVASHLPEPIRQGAERARELVTGHQPSATLFEHLGFTYIGPVDGHDMEELL 262
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL----------------QQ---------- 186
L+ KA G VLIH +T K K P +L QQ
Sbjct: 263 TTLRAAKARAT-GPVLIHAVTVKGKGYSPAELSDDCYHGVAKFDVATGQQKKSAPNAPSY 321
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + L D+R M GGTG++ QK P R FDVGIAEQHAVTF+AG+A
Sbjct: 322 TSVFGQTLLNMAEADSRIVGVTAAMPGGTGISTLQKAKPNRVFDVGIAEQHAVTFSAGMA 381
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A GLKPFCAIYSSFLQR +DQ+ HDV LQ LPVRF IDRAGLVGADGPTH GAFD +++
Sbjct: 382 AGGLKPFCAIYSSFLQRGYDQIVHDVALQSLPVRFMIDRAGLVGADGPTHAGAFDIGYLS 441
Query: 294 CLPNMVVM 301
LPNM VM
Sbjct: 442 ALPNMTVM 449
>gi|260425522|ref|ZP_05779502.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citreicella sp. SE45]
gi|260423462|gb|EEX16712.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citreicella sp. SE45]
Length = 641
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 159/375 (42%), Positives = 196/375 (52%), Gaps = 88/375 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG--- 50
+RT+R GL E+ D FG GHSSTSISA L G AV RDL G
Sbjct: 94 IRTLRMKDGLSGFTKRSESPFDPFGAGHSSTSISAAL----------GFAVARDLGGVCD 143
Query: 51 -KNNHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLH 87
+ I+VI +GA A M+YEA+NNAG L K L RL+
Sbjct: 144 TGSGDAIAVIGDGAMSAGMAYEAMNNAGHLGKRLIVILNDNEMSIAPPTGAMSSYLSRLY 203
Query: 88 SNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREI--EAGSRACFFEDLGLYYIGPVDG 145
+ F+ L A K G E ++E+ FE+LG YIGP+DG
Sbjct: 204 AEAPFQDLKAAA---KGAVSLLPGPFREGAKRAKEVLKTMTVGGTLFEELGFDYIGPLDG 260
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK---------------------- 183
H+L L +L+ VKA G +L+HV+T+K K P +
Sbjct: 261 HDLHQLLPILRTVKARAT-GPILLHVLTKKGKGYAPAEGAADRGHARAKFDLVTGEQKKS 319
Query: 184 ----LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAV 226
T++F + L D+R M GTGL+L + +P R FDVGIAEQH V
Sbjct: 320 PSNAPSYTKIFARELTRLAAEDSRICAVTAAMPDGTGLDLMAERYPSRVFDVGIAEQHGV 379
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TF+AGLAA GLKPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH GA
Sbjct: 380 TFSAGLAAGGLKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGA 439
Query: 287 FDTTFMACLPNMVVM 301
FD FMA LP MVVM
Sbjct: 440 FDIAFMANLPGMVVM 454
>gi|254460223|ref|ZP_05073639.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
HTCC2083]
gi|206676812|gb|EDZ41299.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacteraceae bacterium
HTCC2083]
Length = 624
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 149/373 (39%), Positives = 190/373 (50%), Gaps = 88/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T+RQ GL E+ D FG HSSTSISA L G + RD+
Sbjct: 76 MKTLRQEGGLSGFTKRAESEFDPFGAAHSSTSISAAL----------GFTIARDMGLPTG 125
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
+++I +G+ A M+YEA+NNAG ++K L L+++P
Sbjct: 126 DAVAIIGDGSISAGMAYEALNNAGAEGRRMFVILNDNEMSIAPPVGAMSKYLSGLYASPL 185
Query: 92 FR-QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG---SRACFFEDLGLYYIGPVDGHN 147
Q E F + G + + +R++ G + FEDLG Y+GPVDGH+
Sbjct: 186 GELQTIAEGFEAA-----LPGPLRDHARRARQLVTGVADAGGTMFEDLGFQYVGPVDGHD 240
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------------- 186
++ L VL+ + G VLIH T K K P +
Sbjct: 241 MDQLLSVLRAAR-TRSTGPVLIHCCTVKGKGYAPAEQSADKYHGVAKFDVSTGVQSKSRP 299
Query: 187 -----TRLFCKILDN-------------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T +F K L M GTG+++F HFP R FDVGIAEQH VTF
Sbjct: 300 NAPSYTSVFGKALSKLAEADPKIVGITAAMPSGTGMDIFADHFPKRMFDVGIAEQHGVTF 359
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAG+AA GLKPFCAIYSSFLQR +DQ+ HDV LQ LPVRFAIDRAGLVGADGPTH GAFD
Sbjct: 360 AAGMAAGGLKPFCAIYSSFLQRGYDQIVHDVALQNLPVRFAIDRAGLVGADGPTHAGAFD 419
Query: 289 TTFMACLPNMVVM 301
+++ LPNM VM
Sbjct: 420 VGYLSALPNMTVM 432
>gi|83942135|ref|ZP_00954597.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfitobacter sp. EE-36]
gi|83847955|gb|EAP85830.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfitobacter sp. EE-36]
Length = 646
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 195/375 (52%), Gaps = 88/375 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKN- 52
+RT+R GL E+ +D FG HSSTSISA L G +V RDL G
Sbjct: 98 IRTLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFSVARDLGGNVP 147
Query: 53 ---NHVISVIVEGATIARMSYEAINNAGVLNKA----------------------LKRLH 87
I+VI +G+ A M+YEA+NNAG L K L RL+
Sbjct: 148 EGLGDAIAVIGDGSMSAGMAYEAMNNAGHLKKRMFVILNDNEMSIAPPVGAMSTYLSRLY 207
Query: 88 SNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR--ACFFEDLGLYYIGPVDG 145
+ F+ A K G E ++++ G FE LG Y+GP+DG
Sbjct: 208 AEEPFQDFKAAA---KGAVSMLPGPFREGAKRAKDMLKGMAVGGTLFEQLGFSYLGPIDG 264
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------- 186
H+L L VL+ VKA G VLIHVIT+K K P + +
Sbjct: 265 HDLNQLLPVLRTVKARAT-GPVLIHVITKKGKGYGPAEAARDKGHATAKFNVLTGEQKKA 323
Query: 187 -------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAV 226
TR+F L D++ M GTGLNLF + +P RCFDVGIAEQH V
Sbjct: 324 PSNAPSYTRVFADSLIAEAAKDDKICAVTAAMPDGTGLNLFAERYPSRCFDVGIAEQHGV 383
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TF+AGLAA G+KPFC +YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH GA
Sbjct: 384 TFSAGLAAGGMKPFCTMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGA 443
Query: 287 FDTTFMACLPNMVVM 301
FD F+A LP+ VVM
Sbjct: 444 FDVAFLANLPDFVVM 458
>gi|83953190|ref|ZP_00961912.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfitobacter sp.
NAS-14.1]
gi|83842158|gb|EAP81326.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfitobacter sp.
NAS-14.1]
Length = 642
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 195/375 (52%), Gaps = 88/375 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKN- 52
+RT+R GL E+ +D FG HSSTSISA L G +V RDL G
Sbjct: 94 IRTLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFSVARDLGGNVP 143
Query: 53 ---NHVISVIVEGATIARMSYEAINNAGVLNKA----------------------LKRLH 87
I+VI +G+ A M+YEA+NNAG L K L RL+
Sbjct: 144 EGLGDAIAVIGDGSMSAGMAYEAMNNAGHLKKRMFVILNDNEMSIAPPVGAMSTYLSRLY 203
Query: 88 SNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR--ACFFEDLGLYYIGPVDG 145
+ F+ A K G E ++++ G FE LG Y+GP+DG
Sbjct: 204 AEEPFQDFKAAA---KGAVSMLPGPFREGAKRAKDMLKGMAVGGTLFEQLGFSYLGPIDG 260
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------- 186
H+L L VL+ VKA G VLIHVIT+K K P + +
Sbjct: 261 HDLNQLLPVLRTVKARAT-GPVLIHVITKKGKGYGPAEAARDKGHATAKFNVLTGEQKKA 319
Query: 187 -------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAV 226
TR+F L D++ M GTGLNLF + +P RCFDVGIAEQH V
Sbjct: 320 PSNAPSYTRVFADSLIAEAAKDDKICAVTAAMPDGTGLNLFAERYPSRCFDVGIAEQHGV 379
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TF+AGLAA G+KPFC +YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH GA
Sbjct: 380 TFSAGLAAGGMKPFCTMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGA 439
Query: 287 FDTTFMACLPNMVVM 301
FD F+A LP+ VVM
Sbjct: 440 FDVAFLANLPDFVVM 454
>gi|15239030|ref|NP_196699.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana]
gi|8953400|emb|CAB96673.1| 1-D-deoxyxylulose 5-phosphate synthase-like protein [Arabidopsis
thaliana]
gi|332004286|gb|AED91669.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana]
Length = 700
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/349 (40%), Positives = 192/349 (55%), Gaps = 67/349 (19%)
Query: 7 TCGLENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIA 66
T LE+ +D+FG GH SISAGL G+AV RD+ GK + V++VI A
Sbjct: 175 TSRLESEYDSFGTGHGCNSISAGL----------GLAVARDMKGKRDRVVAVIDNVTITA 224
Query: 67 RMSYEAINNAG--------VLNKALKRLHSNPQ----------------------FRQLC 96
+YEA++NAG +LN + LH N + FR+
Sbjct: 225 GQAYEAMSNAGYLDSNMIVILNDSRHSLHPNMEEGSKASISALSSIMSKIQSSKVFRKFR 284
Query: 97 QEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLA 152
+ A K ++ G M+E +D ++R + + + FE+LGLYYIGPVDGHN+EDL
Sbjct: 285 ELA---KAMTKRIGKGMYEWAAKVDEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLV 341
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK---LQQTRLFCK----------------- 192
VL++V ++ G VL+HVITE + +K ++ R +
Sbjct: 342 CVLREVSSLDSMGPVLVHVITEGNRDAETVKNIMVKDRRTYSDCFVEALVMEAEKDRDIV 401
Query: 193 ILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCF 252
++ M L FQ+ FP R F+VG+AEQHAVTF+AGL++ GLKPFC I S+FLQR +
Sbjct: 402 VVHAGMEMDPSLLTFQERFPDRFFNVGMAEQHAVTFSAGLSSGGLKPFCIIPSAFLQRAY 461
Query: 253 DQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DQV HDVD Q+ VRF I AGLVG+DGP CGAFD FM+ LPNM+ M
Sbjct: 462 DQVVHDVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLPNMIAM 510
>gi|310814825|ref|YP_003962789.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ketogulonicigenium vulgare
Y25]
gi|385234996|ref|YP_005796338.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Ketogulonicigenium
vulgare WSH-001]
gi|308753560|gb|ADO41489.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ketogulonicigenium vulgare
Y25]
gi|343463907|gb|AEM42342.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Ketogulonicigenium
vulgare WSH-001]
Length = 644
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 159/373 (42%), Positives = 195/373 (52%), Gaps = 83/373 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKN- 52
+RT+RQ GL E+ +D FG HSSTSISA L G AV RDL G
Sbjct: 96 IRTLRQKDGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGGATP 145
Query: 53 ----NHVISVIVEGATIARMSYEAINNAGVLNKAL-KRLHSNPQFRQLCQEAFSSKDKKQ 107
I++I +G+ A M++EA+NNAG L K + L+ N A SS +
Sbjct: 146 EGAIGDTIAIIGDGSMSAGMAFEAMNNAGDLKKRMFVILNDNEMSIAPPVGALSSYLSRL 205
Query: 108 KFGGQMHEIDAFSREI---------EAGSRA-----------CFFEDLGLYYIGPVDGHN 147
GG ++ A ++ E RA FE+LG Y+GP+DGH+
Sbjct: 206 YAGGPFQDLKAAAKGAVNMLPEPLREGAKRAKEMLKHMTVGGTMFEELGFSYLGPIDGHD 265
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------------- 186
+E L VL+ V G VLIH IT+K K P + +
Sbjct: 266 MEQLLAVLRTVHDRAT-GPVLIHAITQKGKGYAPAEAARDKGHGVGKFDVVTGEQAKVKS 324
Query: 187 -----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T +F L D+R M GTGL+ F F RCFDVGIAEQHAVTF
Sbjct: 325 NAPSYTSVFANALIEQAEKDSRIVAITAAMPDGTGLDKFMVRFADRCFDVGIAEQHAVTF 384
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLAA G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH GAFD
Sbjct: 385 AAGLAAGGMKPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFD 444
Query: 289 TTFMACLPNMVVM 301
FMA LP MVVM
Sbjct: 445 IAFMANLPGMVVM 457
>gi|254449568|ref|ZP_05063005.1| 1-deoxy-D-xylulose-5-phosphate synthase [Octadecabacter arcticus
238]
gi|198263974|gb|EDY88244.1| 1-deoxy-D-xylulose-5-phosphate synthase [Octadecabacter arcticus
238]
Length = 626
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 194/366 (53%), Gaps = 76/366 (20%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G AV RDL G+
Sbjct: 85 IRTLRQKDGLSGFTKRSESPYDCFGAAHSSTSISAAL----------GFAVARDLGGEGG 134
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
I+VI +GA A M+YEA+NNAG L K L L+ N A SS + G
Sbjct: 135 DAIAVIGDGAMSAGMAYEALNNAGHLKKRLIVILNDNEMSIAPPVGAMSSYLSRLYAGDP 194
Query: 113 MHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDLA 152
E A ++ ++ G+R FE+LG Y+GP+DGH++E L
Sbjct: 195 FQEFKAAAKGAVSFLPGPLQEGARRAKDMLKHMTVGGTLFEELGFSYLGPIDGHDMEQLL 254
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------TR 188
VL+ VK G +LIH IT+K K + + T
Sbjct: 255 SVLRTVKTRAT-GPILIHAITKKGKGYAENRADRGHATAKFDVVTGEQKKTPSNAPSYTS 313
Query: 189 LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAE 235
+F + L D++ M GTGL+ F F RCFDVGIAEQHAVTF AGLAA
Sbjct: 314 VFAESLIKQATKDDKIVAVTAAMPDGTGLDRFMSRFASRCFDVGIAEQHAVTFCAGLAAG 373
Query: 236 GLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACL 295
G+KPFC IYS+FLQR +DQ+ HDV +Q+LPVRFAIDRAGLVGADG TH G+FD F+A L
Sbjct: 374 GMKPFCTIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLANL 433
Query: 296 PNMVVM 301
P VVM
Sbjct: 434 PGFVVM 439
>gi|149202565|ref|ZP_01879537.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. TM1035]
gi|149143847|gb|EDM31881.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. TM1035]
Length = 643
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 160/372 (43%), Positives = 198/372 (53%), Gaps = 82/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGK-- 51
+RT+RQ GL E+ +D FG HSSTSISA L G AV RDL G
Sbjct: 95 IRTLRQKDGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGGNCP 144
Query: 52 --NNHVISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQK 108
I+VI +GA A M++EA+NNAG L K L L+ N A SS +
Sbjct: 145 SGLGDAIAVIGDGAMSAGMAFEAMNNAGHLKKRLIVILNDNEMSIAPPVGALSSYLSRLY 204
Query: 109 FGGQMHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNL 148
+ A ++ + G+R FE+LG Y+GP+DGH+L
Sbjct: 205 AEAPFQDFKAAAKGAISLLPPPFQEGARRAKDMLKGLAVGGTLFEELGFSYVGPIDGHDL 264
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
L VL+ VKA G +LIHV+T+K K P + +
Sbjct: 265 HQLLPVLRTVKARAT-GPILIHVLTKKGKGYGPAERARDGGHATAKFDVLTGEQRKSPSN 323
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F K L D++ M GTGLNLF + +P R FDVGIAEQHAVTF+
Sbjct: 324 APSYTGVFAKALLAHAAQDDKICAVTAAMPDGTGLNLFAERYPSRLFDVGIAEQHAVTFS 383
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA GLKPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH GAFDT
Sbjct: 384 AGLAAGGLKPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFDT 443
Query: 290 TFMACLPNMVVM 301
F+A LP VVM
Sbjct: 444 AFLANLPGFVVM 455
>gi|294678978|ref|YP_003579593.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter capsulatus SB
1003]
gi|294477798|gb|ADE87186.1| 1-deoxy-D-xylulose-5-phosphate synthase-2 [Rhodobacter capsulatus
SB 1003]
Length = 636
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 151/368 (41%), Positives = 197/368 (53%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +DAFG GHSSTSISA L G + R+L +
Sbjct: 94 IRTLRTRGGLSGFTKRSESPYDAFGAGHSSTSISAAL----------GFTMARELGSECG 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL-KRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
I+VI +GA M++EA+N+ G L K + L+ N A SS +
Sbjct: 144 DAIAVIGDGAMTGGMAFEALNHGGHLGKRMFVILNDNEMSISPPVGALSSYLTRLYAEAP 203
Query: 113 MHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDLA 152
M ++ A ++ + G+R FE+LG Y+GPVDGH+LE L
Sbjct: 204 MQDLKAMAKGAVSLLPEPFQEGARRAKEMLKGMTIGGTLFEELGFDYVGPVDGHDLETLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
++ + +K G VLIH +T+K K P + +
Sbjct: 264 HLFRTLKTRAT-GPVLIHALTKKGKGYAPAENRPDRGHATARFDVLTGAQVKAASNAPSY 322
Query: 187 TRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L ++ M GTGLNLF + FP RCFDVGIAEQH VTF+AGLA
Sbjct: 323 TKVFAESLIDQASRDEKIVAVTAAMPEGTGLNLFAERFPRRCFDVGIAEQHGVTFSAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A G+KPFCAIYS+FLQR +DQ+ HDV +Q+LPVRFAIDRAGLVGADG TH GAFD FMA
Sbjct: 383 AGGMKPFCAIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFDIGFMA 442
Query: 294 CLPNMVVM 301
LP MVVM
Sbjct: 443 NLPGMVVM 450
>gi|114798103|ref|YP_760539.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomonas neptunium ATCC
15444]
gi|122942403|sp|Q0C154.1|DXS_HYPNA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|114738277|gb|ABI76402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomonas neptunium ATCC
15444]
Length = 640
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 156/374 (41%), Positives = 199/374 (53%), Gaps = 92/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRT+RQ GL E+ +D FG H+STSISAGL G A RDL K+N
Sbjct: 94 MRTLRQGGGLSGFTKRSESEYDPFGAAHASTSISAGL----------GFAKSRDLQNKDN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
HVI VI +G+ A M+YEA+NNAG ++ RL S+
Sbjct: 144 HVICVIGDGSMSAGMAYEAMNNAGADRSRMIVILNDNDMSIAPPVGAMSHYFSRLVSSRP 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGH 146
+R L + A K Q G +++ +R E R FE++G YYIGPVDGH
Sbjct: 204 YRGLRRIA---KKVVQPMG-----LESPARRAEEYLRGFAMGGTLFEEMGFYYIGPVDGH 255
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPL------------------------ 182
+L+ L +L+ +KA+ D G +L+HV+T+K K P
Sbjct: 256 DLDTLLDLLENIKAMQD-GPILLHVVTQKGKGYAPAENSADKYHGVSKFSVVTGEQAKGA 314
Query: 183 ---------------KLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
KL +T + M GT ++F K FP R FDVGIAEQHAVT
Sbjct: 315 GGPPSYQKVFGQTLAKLGETDDKICAITAAMPSGTSTDIFGKKFPDRHFDVGIAEQHAVT 374
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLAA+G+KPFCAIYS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH G+F
Sbjct: 375 FAAGLAADGMKPFCAIYSTFLQRGYDQVVHDVAIQQLPVRFAIDRAGLVGADGATHAGSF 434
Query: 288 DTTFMACLPNMVVM 301
D ++ LP V M
Sbjct: 435 DIGYLGALPGFVCM 448
>gi|146278825|ref|YP_001168984.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
ATCC 17025]
gi|145557066|gb|ABP71679.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
ATCC 17025]
Length = 637
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 197/368 (53%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISA VG A R+L G
Sbjct: 94 IRTLRQGGGLSGFTKRSESPYDCFGAGHSSTSISAA----------VGFAAARELGGDTG 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
+++I +G+ A M++EA+N+ G L N+ + L+ N A SS + G
Sbjct: 144 DAVAIIGDGSMSAGMAFEALNHGGHLKNRVIVILNDNEMSIAPPVGALSSYLSRLYAGAP 203
Query: 113 MHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDLA 152
+ A ++ + G+R FE+LG Y+GP+DGH+L+ L
Sbjct: 204 FQDFKAAAKGALGLLPEPFQEGARRAKEMLKSVTVGGTLFEELGFSYVGPIDGHDLDQLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VL+ VK VLIHVIT+K K P + +
Sbjct: 264 PVLRTVKQRAS-APVLIHVITKKGKGYAPAEAARDRGHATNKFNVLTGAQVKPVSNAPSY 322
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D R M GTGLNLF FP R FDVGIAEQHAVTF+AGLA
Sbjct: 323 TKVFAQSLIKEAEVDERICAVTAAMPDGTGLNLFADRFPKRIFDVGIAEQHAVTFSAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A G++PFCAIYS+FLQR +DQ+ HDV +Q+LPVRFAIDRAGLVGADG TH G+FD F++
Sbjct: 383 AGGMRPFCAIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLS 442
Query: 294 CLPNMVVM 301
LP +VVM
Sbjct: 443 NLPGIVVM 450
>gi|407799466|ref|ZP_11146359.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceaniovalibus
guishaninsula JLT2003]
gi|407058651|gb|EKE44594.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceaniovalibus
guishaninsula JLT2003]
Length = 641
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 159/372 (42%), Positives = 196/372 (52%), Gaps = 82/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+V+D FG HSSTSISA L G A RDL G+ +
Sbjct: 94 IRTLRQKDGLSGFTKRSESVYDPFGAAHSSTSISAAL----------GFATARDLGGRPD 143
Query: 54 ----HVISVIVEGATIARMSYEAINNAGVLNKAL-KRLHSNPQFRQLCQEAFSSKDKKQK 108
I+VI +GA A M++EA+NNAG + K L L+ N A SS +
Sbjct: 144 PRLGDAIAVIGDGAMSAGMAFEAMNNAGHMKKRLFVVLNDNEMSIAPPVGAMSSYLSRLY 203
Query: 109 FGGQMHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNL 148
G E A ++ ++ G+R FE+LG YIGP+DGH+L
Sbjct: 204 AGAPFQEFKAAAKGAVSLLPQPLQQGARRAKDLIKHITIGGTLFEELGFDYIGPLDGHDL 263
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK------------------------- 183
+ L VL+ V+A G +L+HVIT K K P +
Sbjct: 264 DQLLPVLRTVRARAT-GPMLLHVITRKGKGYAPAEEAADRGHATSKFDVITGKQKKSPSN 322
Query: 184 -LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F K L D R M GTGLNLF + RCFDVGIAEQH VTFA
Sbjct: 323 APSYTSVFAKALIREAADDPRICAVTAAMPDGTGLNLFAERHASRCFDVGIAEQHGVTFA 382
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA G++PFCAIYS+FLQR +DQV HDV LQ+LPVRFAIDRAGLVGADG TH GAFD
Sbjct: 383 AGLAAGGMRPFCAIYSTFLQRGYDQVVHDVALQRLPVRFAIDRAGLVGADGATHAGAFDI 442
Query: 290 TFMACLPNMVVM 301
F++ LP VM
Sbjct: 443 AFLSNLPGFTVM 454
>gi|229597238|ref|YP_001756649.2| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
radiotolerans JCM 2831]
Length = 664
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 201/379 (53%), Gaps = 89/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL----- 48
+RT+RQ GL E+V+D FG HSSTSISA L GMAV RDL
Sbjct: 95 IRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAAL----------GMAVARDLDNATA 144
Query: 49 -----LGKNNHVISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSS 102
K + I+VI +G+ A M+YEA+NNAG L+ L L+ N A S+
Sbjct: 145 KQKGGAQKRRNAIAVIGDGSMSAGMAYEALNNAGALHSRLIVILNDNDMSIAPPVGAMSA 204
Query: 103 KDKKQKFGGQMHEIDAFSREI-EAGSRACF--------------------FEDLGLYYIG 141
+ GG + ++++ + +A + FE++G +Y+G
Sbjct: 205 YLARLASGGAYQSLRETAKQLGKLLPKALYQRAAAAEEYARSLVVGGGTMFEEMGFHYVG 264
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------- 186
PVDGHNL+ L VLK V+ + G +L+HV+T+K K P +
Sbjct: 265 PVDGHNLDHLLPVLKNVRDA-EHGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSGI 323
Query: 187 -----------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
TR+F + L D++ M GGTG++LF K P + FDVGIAE
Sbjct: 324 QAKAKPNAPAYTRVFGESLIKAADADDKVVAITAAMPGGTGIDLFGKAHPDKTFDVGIAE 383
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFA GLA EG +PF AIYS+FLQR +DQV HDV LQ LPVRF +DRAGLVGADG T
Sbjct: 384 QHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLDRAGLVGADGAT 443
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GAFD ++ CLPNM VM
Sbjct: 444 HAGAFDLAYLCCLPNMTVM 462
>gi|229597237|ref|YP_001756119.2| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
radiotolerans JCM 2831]
Length = 656
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 153/379 (40%), Positives = 202/379 (53%), Gaps = 89/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL----- 48
+RT+RQ GL E+V+D FG HSSTSISA L GMAV RDL
Sbjct: 95 IRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAAL----------GMAVARDLDNATA 144
Query: 49 -----LGKNNHVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQFRQLCQEAFSS 102
K + I+VI +G+ A M+YEA+NNAG L ++ + L+ N A S+
Sbjct: 145 KQKGGAQKRRNAIAVIGDGSMSAGMAYEALNNAGALHSRLIVILNDNDMSIAPPVGAMSA 204
Query: 103 KDKKQKFGGQMHEIDAFSREI-EAGSRACF--------------------FEDLGLYYIG 141
+ GG + ++++ + +A + FE++G +Y+G
Sbjct: 205 YLARLASGGAYQSLRETAKQLGKLLPKALYQRAAAAEEYARSLVVGGGTMFEEMGFHYVG 264
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------- 186
PVDGHNL+ L VLK V+ + G +L+HV+T+K K P +
Sbjct: 265 PVDGHNLDHLLPVLKNVRDA-EHGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSGI 323
Query: 187 -----------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
TR+F + L D++ M GGTG++LF K P + FDVGIAE
Sbjct: 324 QAKAKPNAPAYTRVFGESLIKAADADDKVVAITAAMPGGTGIDLFGKAHPDKTFDVGIAE 383
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFA GLA EG +PF AIYS+FLQR +DQV HDV LQ LPVRF +DRAGLVGADG T
Sbjct: 384 QHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLDRAGLVGADGAT 443
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GAFD ++ CLPNM VM
Sbjct: 444 HAGAFDLAYLCCLPNMTVM 462
>gi|170656381|gb|ACB25436.1| deoxyxylulose-5-phosphate synthase [Methylobacterium radiotolerans
JCM 2831]
Length = 626
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 193/379 (50%), Gaps = 89/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL----- 48
+RT+RQ GL E+V+D FG HSSTSISA L GMAV RDL
Sbjct: 65 IRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAAL----------GMAVARDLDNATA 114
Query: 49 -----LGKNNHVISVIVEGATIARMSYEAINNAGVLNKAL-------------------- 83
K + I+VI +G+ A M+YEA+NNAG L+ L
Sbjct: 115 KQKGGAQKRRNAIAVIGDGSMSAGMAYEALNNAGALHSRLIVILNDNDMSIAPPVGAMSA 174
Query: 84 --KRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
RL S ++ L + A K Q FE++G +Y+G
Sbjct: 175 YLARLASGGAYQSLRETAKQLGKLLPKALYQRAAAAEEYARSLVVGGGTMFEEMGFHYVG 234
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------- 186
PVDGHNL+ L VLK V+ + G +L+HV+T+K K P +
Sbjct: 235 PVDGHNLDHLLPVLKNVRDA-EHGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSGI 293
Query: 187 -----------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
TR+F + L D++ M GGTG++LF K P + FDVGIAE
Sbjct: 294 QAKAKPNAPAYTRVFGESLIKAADADDKVVAITAAMPGGTGIDLFGKAHPDKTFDVGIAE 353
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFA GLA EG +PF AIYS+FLQR +DQV HDV LQ LPVRF +DRAGLVGADG T
Sbjct: 354 QHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLDRAGLVGADGAT 413
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GAFD ++ CLPNM VM
Sbjct: 414 HAGAFDLAYLCCLPNMTVM 432
>gi|84514695|ref|ZP_01002059.1| 1-deoxy-D-xylulose-5-phosphate synthase [Loktanella vestfoldensis
SKA53]
gi|84511746|gb|EAQ08199.1| 1-deoxy-D-xylulose-5-phosphate synthase [Loktanella vestfoldensis
SKA53]
Length = 637
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 186/351 (52%), Gaps = 71/351 (20%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D FG HSSTSISA L G AV RDL G I++I +GA A M+Y
Sbjct: 111 ESPYDPFGAAHSSTSISAAL----------GFAVARDLGGDPGDAIAIIGDGAISAGMAY 160
Query: 71 EAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREI------ 123
EA+NNAG L K L L+ N A SS + G E A ++
Sbjct: 161 EAMNNAGHLGKRLIVILNDNEMSIAPPVGAMSSYLSQLYAGAPFQEFKAAAKGAVSLLPE 220
Query: 124 ---EAGSRA-----------CFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLI 169
E RA FE LG Y+GP+DGH+++ L VL+ VKA D G +LI
Sbjct: 221 PFREGAKRAKDVLKHMTVGGTLFEQLGFSYVGPIDGHDMDQLLSVLRTVKARAD-GPILI 279
Query: 170 HVITEKEKAMLPLKLQQ--------------------------TRLFCKIL------DNR 197
H IT+K K P + T +F + L D R
Sbjct: 280 HAITKKGKGYAPAESASDKGHATAKFDLVTGKQAKAPSNAPSYTSVFAESLLKHAAADPR 339
Query: 198 -------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR 250
M GTGL+ F + + RCFDVGIAEQHAVTF+AGLAA G++PFCAIYS+FLQR
Sbjct: 340 ICAVTAAMPDGTGLSKFMERYASRCFDVGIAEQHAVTFSAGLAAGGMRPFCAIYSTFLQR 399
Query: 251 CFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
+DQ+ HDV +Q+LPVRFAIDRAGLVGADG TH G+FD F+A LP VVM
Sbjct: 400 GYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLANLPGFVVM 450
>gi|170656911|gb|ACB25966.1| deoxyxylulose-5-phosphate synthase [Methylobacterium radiotolerans
JCM 2831]
Length = 634
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 201/379 (53%), Gaps = 89/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL----- 48
+RT+RQ GL E+V+D FG HSSTSISA L GMAV RDL
Sbjct: 65 IRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAAL----------GMAVARDLDNATA 114
Query: 49 -----LGKNNHVISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSS 102
K + I+VI +G+ A M+YEA+NNAG L+ L L+ N A S+
Sbjct: 115 KQKGGAQKRRNAIAVIGDGSMSAGMAYEALNNAGALHSRLIVILNDNDMSIAPPVGAMSA 174
Query: 103 KDKKQKFGGQMHEIDAFSREI-EAGSRACF--------------------FEDLGLYYIG 141
+ GG + ++++ + +A + FE++G +Y+G
Sbjct: 175 YLARLASGGAYQSLRETAKQLGKLLPKALYQRAAAAEEYARSLVVGGGTMFEEMGFHYVG 234
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------- 186
PVDGHNL+ L VLK V+ + G +L+HV+T+K K P +
Sbjct: 235 PVDGHNLDHLLPVLKNVRDA-EHGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSGI 293
Query: 187 -----------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
TR+F + L D++ M GGTG++LF K P + FDVGIAE
Sbjct: 294 QAKAKPNAPAYTRVFGESLIKAADADDKVVAITAAMPGGTGIDLFGKAHPDKTFDVGIAE 353
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFA GLA EG +PF AIYS+FLQR +DQV HDV LQ LPVRF +DRAGLVGADG T
Sbjct: 354 QHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLDRAGLVGADGAT 413
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GAFD ++ CLPNM VM
Sbjct: 414 HAGAFDLAYLCCLPNMTVM 432
>gi|339320004|ref|YP_004679699.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Midichloria
mitochondrii IricVA]
gi|338226129|gb|AEI89013.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Midichloria
mitochondrii IricVA]
Length = 624
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 199/372 (53%), Gaps = 85/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ G+ E+++D FG GHSSTSISA L G A RD+ +NN
Sbjct: 88 MSTIRQPGGIAGFTKRNESIYDPFGAGHSSTSISAAL----------GFAAARDIKKQNN 137
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKA----------------------LKRLHSNPQ 91
HVI+VI +GA A M++EA+NNA +LN L +L S+ Q
Sbjct: 138 HVIAVIGDGAMSAGMAFEALNNASMLNTKMLVILNDNKMSIAPAVGAMSSYLAKLLSSRQ 197
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDL 151
+ + A ++ F + + ++ + GS FFE++G +YIGPV GH+L+ L
Sbjct: 198 YYKARNIAKNALHYTPFFEKVVKNVQKCTKRLATGSN--FFEEIGFHYIGPVGGHSLDQL 255
Query: 152 AYVLKQVK---AIPDPGAVLIHVITEKEK-------------AMLPLKLQQ--------- 186
VL+ ++ + P +L+H+ TEK + A+LP LQ
Sbjct: 256 IPVLRNIRDNDQVNKP--ILLHIRTEKGRGFDSPEKSLESYHAVLPFDLQTKIQKKPEKS 313
Query: 187 ----TRLFCKILDN-------------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+++F L M GTGL+L K P + +DVGIAEQHAVTFA
Sbjct: 314 YLSYSKVFASTLTKIAKKNKEVVAITAAMPSGTGLDLMIKELPDQVYDVGIAEQHAVTFA 373
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA G KPF AIYS+FLQR +DQ+ HDV +Q LPVRF +DRAGLVGADGPTH G+FD
Sbjct: 374 AGLAAAGTKPFVAIYSTFLQRAYDQIIHDVAIQSLPVRFMLDRAGLVGADGPTHAGSFDL 433
Query: 290 TFMACLPNMVVM 301
++ LPN + M
Sbjct: 434 AYLCNLPNFICM 445
>gi|89052579|ref|YP_508030.1| 1-deoxy-D-xylulose-5-phosphate synthase [Jannaschia sp. CCS1]
gi|118595482|sp|Q28WA7.1|DXS1_JANSC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
synthase 1; Short=DXPS 1
gi|88862128|gb|ABD53005.1| 1-deoxy-D-xylulose-5-phosphate synthase [Jannaschia sp. CCS1]
Length = 639
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 197/370 (53%), Gaps = 80/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ D FG HSSTSISA L G AV RDL G ++
Sbjct: 94 MLTIRQKDGLSGFTKRSESPFDPFGAAHSSTSISAAL----------GFAVARDLGGDSD 143
Query: 54 ----HVISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQK 108
I+VI +GA M++EA+NNAG L K L L+ N A SS +
Sbjct: 144 TGHGDAIAVIGDGAMSGGMAFEAMNNAGHLGKRLIVILNDNEMSIAPPTGALSSYLSRLY 203
Query: 109 FGGQMHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNL 148
G E A ++ + G+R FE+LG Y+GP+DGH++
Sbjct: 204 AGAPFQEFKAAAKGAVSLLPEPFQEGARRAKELLKSATVGGTLFEELGFSYVGPIDGHDM 263
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
E L VL+ VKA D G +LIH IT+K K + +
Sbjct: 264 ESLLSVLRTVKARAD-GPILIHAITKKGKGYSEHRADRGHATAKFNIATGEQVKAPSNAP 322
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T++F + L D + M GTGL+LF + FP RCFDVGIAEQH VTFAAG
Sbjct: 323 SYTKVFAQSLIAEAEDDPKVVAVTAAMPDGTGLDLFAERFPSRCFDVGIAEQHGVTFAAG 382
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+AA GLKPF AIYS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH G++D ++
Sbjct: 383 MAAGGLKPFAAIYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGCTHAGSYDISY 442
Query: 292 MACLPNMVVM 301
+A LP VVM
Sbjct: 443 LANLPGFVVM 452
>gi|384921844|ref|ZP_10021805.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citreicella sp. 357]
gi|384464259|gb|EIE48843.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citreicella sp. 357]
Length = 641
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 195/375 (52%), Gaps = 88/375 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RTIRQ GL E+ +D FG GHSSTSISA L G AV RDL G +
Sbjct: 94 IRTIRQQGGLSGFTKRSESPYDCFGAGHSSTSISAAL----------GFAVARDLGGTTD 143
Query: 54 ----HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLH 87
I+VI +GA A M++EA+NNAG L K L RL+
Sbjct: 144 TGAGDAIAVIGDGAMSAGMAFEAMNNAGHLGKRLIVILNDNEMSIAAPTGAMSSYLSRLY 203
Query: 88 SNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR--ACFFEDLGLYYIGPVDG 145
+ F+ L ++K + E ++E+ G FE+LG Y+GP+DG
Sbjct: 204 AEAPFQDL---KVAAKGAVALLPPPLREGAKRAKEMIKGMAVGGTLFEELGFSYLGPIDG 260
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR----------------- 188
H+L L VL+ V+ G +LIH +T+K K P + R
Sbjct: 261 HDLHQLLPVLRTVRDRAT-GPILIHALTKKGKGYAPAEGSADRGHARAKFDVSTGEQKKA 319
Query: 189 ---------LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAV 226
+F K L D R M GTGL+L + FP R FDVGIAEQH V
Sbjct: 320 PSNAPSYTSVFAKELTRLAEVDPRICAVTAAMPDGTGLDLMAERFPARVFDVGIAEQHGV 379
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFAAGLAA GL+PFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH GA
Sbjct: 380 TFAAGLAAGGLRPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGA 439
Query: 287 FDTTFMACLPNMVVM 301
+D FM LP MVVM
Sbjct: 440 YDIAFMTNLPGMVVM 454
>gi|85375331|ref|YP_459393.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter litoralis
HTCC2594]
gi|123099471|sp|Q2N6U5.1|DXS_ERYLH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|84788414|gb|ABC64596.1| 1-D-deoxyxylulose 5-phosphate synthase [Erythrobacter litoralis
HTCC2594]
Length = 640
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 194/370 (52%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL G AV L G+
Sbjct: 94 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAGL----------GFAVANKLKGEPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L RL S+ +
Sbjct: 144 KAIAVIGDGAMSAGMAYEAMNNAEQAGNRLIVILNDNDMSIAPPVGGLSGYLARLMSSSE 203
Query: 92 FRQLCQEAFSSKDK-KQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+ L A K ++ + + + +++ + G FE+LG YY+GP+DGHNL+
Sbjct: 204 YLGLRSLASRMTAKVSRRVHTSLGKAEEYTKGLVTG--GTLFEELGFYYVGPIDGHNLDH 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------------- 188
L VL+ V+ + G LIHV T K K P + +
Sbjct: 262 LIPVLENVRDAEE-GPFLIHVRTVKGKGYAPAENSADKYHGVAKFDVVTGEQKKSTGGPP 320
Query: 189 --------LFCKILDNR---------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
K+ D+ M GTG++ F K P R FDVGIAEQH VTFAAG
Sbjct: 321 AYQNVFGETLAKLADSDPRICAITAAMPSGTGVDKFAKAHPDRAFDVGIAEQHGVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA+G++PF AIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD T+
Sbjct: 381 LAAQGMRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTY 440
Query: 292 MACLPNMVVM 301
+A LPN VVM
Sbjct: 441 LATLPNFVVM 450
>gi|407782343|ref|ZP_11129556.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibaculum indicum P24]
gi|407206073|gb|EKE76035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibaculum indicum P24]
Length = 602
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/330 (44%), Positives = 180/330 (54%), Gaps = 63/330 (19%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D FG HSSTSISAGL G A+ R+L G V+ VI +GA A M++
Sbjct: 90 ESPYDPFGAAHSSTSISAGL----------GFAMARELGGDPGDVVCVIGDGAMSAGMAF 139
Query: 71 EAINNAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRAC 130
EAINNAG L K + F L A S F + E+ A G
Sbjct: 140 EAINNAGALGKRI--------FVILNDNAMSISPSTGAFATYLAELGA-----RPGEERS 186
Query: 131 FFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEK------------- 177
FF +G Y GPVDGH+L L L+ ++ G VL+H IT K
Sbjct: 187 FFAQMGFAYHGPVDGHDLPGLLEKLRSLRE-EATGPVLLHAITRKGAGYDAAETSADKYH 245
Query: 178 --AMLPLKLQQ-----------TRLFCKIL------DNR-------MGGGTGLNLFQKHF 211
A ++ Q T++F L D+R M GTG+++F++HF
Sbjct: 246 GVAKFDVETGQQAKAAAAAPSYTKVFAGALVKEAEKDSRIIAITAAMEAGTGVDIFRRHF 305
Query: 212 PIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAID 271
P R FDVGIAEQHAVTFAAGLAA G+KPFCAIYS+FLQR +DQ+ HDV LQ LPVRFAID
Sbjct: 306 PDRAFDVGIAEQHAVTFAAGLAAGGMKPFCAIYSTFLQRGYDQIVHDVALQGLPVRFAID 365
Query: 272 RAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
RAGLVGADGPTH GAFD ++A LP VM
Sbjct: 366 RAGLVGADGPTHAGAFDVGYLANLPGFTVM 395
>gi|254485860|ref|ZP_05099065.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. GAI101]
gi|214042729|gb|EEB83367.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. GAI101]
Length = 642
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 193/375 (51%), Gaps = 88/375 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG--- 50
+RT+R GL E+ +D FG HSSTSISA L G AV RDL G
Sbjct: 94 IRTLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGGVVP 143
Query: 51 -KNNHVISVIVEGATIARMSYEAINNAGVLNKA----------------------LKRLH 87
I+VI +G+ A M+YEA+NNAG L K L RL+
Sbjct: 144 EGLGDAIAVIGDGSMSAGMAYEAMNNAGDLQKRMIVILNDNEMSIAPPVGAMSAYLSRLY 203
Query: 88 SNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR--ACFFEDLGLYYIGPVDG 145
+ F++ A K G E ++++ G FE LG YIGP+DG
Sbjct: 204 AEEPFQEFKAVA---KGAVSMLPGPFREGAKRAKDMLKGMTVGGTLFEQLGFSYIGPIDG 260
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------- 186
H+L L VL+ VKA G LIHVIT+K K P + +
Sbjct: 261 HDLNQLLPVLRTVKARAT-GPTLIHVITKKGKGYGPAEAARDKGHATSKFNVLTGEQKKA 319
Query: 187 -------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAV 226
TR+F L D++ M GTGLNLF + +P RCFDVGIAEQH V
Sbjct: 320 PSNAPSYTRVFADTLIAEAARDDKICAVTAAMPDGTGLNLFAERYPSRCFDVGIAEQHGV 379
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TF+A LAA G+KPFC +YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH GA
Sbjct: 380 TFSAALAAGGMKPFCTMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGA 439
Query: 287 FDTTFMACLPNMVVM 301
FD F+A LP VVM
Sbjct: 440 FDVAFLANLPGFVVM 454
>gi|385810711|ref|YP_005847107.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ignavibacterium album JCM
16511]
gi|383802759|gb|AFH49839.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ignavibacterium album JCM
16511]
Length = 648
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 153/373 (41%), Positives = 198/373 (53%), Gaps = 85/373 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
++ IR+ G+ E+ +DAFG GH++TSISA L GMAVGRDL ++N
Sbjct: 102 LKRIRKFGGISGFLKRTESEYDAFGAGHATTSISAAL----------GMAVGRDLNNESN 151
Query: 54 H-VISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQ---EAFSSK 103
VI++I +GA M+YEA+NN+GVL L R+ P Q+ E S
Sbjct: 152 RKVIAIIGDGAMTGGMAYEAMNNSGVLKSDLIVVLNDNRMSIAPNVWQISNYFTEMISHP 211
Query: 104 DKKQKFGGQMHEI----DAF-------SREIEAGSRAC-----FFEDLGLYYIGPVDGHN 147
D KF Q+ ++ DAF + +E+G +A FE LG Y GPV+GHN
Sbjct: 212 DY-NKFKAQIWDLTGKLDAFGDRLRKIAARLESGIKAVVTPGMLFEALGFRYFGPVNGHN 270
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL------------------ 189
L L + + VK + P +LIH ITEK K P + RL
Sbjct: 271 LHQLIRIFEHVKTLKGP--ILIHAITEKGKGYKPAEGHIQRLHASTPFDKLTGKAYKKEG 328
Query: 190 ----FCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
+ I N M GTGL++ QK FP FDVGIAE+HAVTF
Sbjct: 329 APPAYTTIFGNALVEIVKQNPKVVGITGAMPDGTGLDILQKEFPKNYFDVGIAEEHAVTF 388
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLA +G+ P AIYS+FLQR FDQ+ HDV LQKL V F +DRAGLVGADGPTH GAFD
Sbjct: 389 AAGLATQGIIPVVAIYSTFLQRAFDQIIHDVALQKLHVVFVMDRAGLVGADGPTHHGAFD 448
Query: 289 TTFMACLPNMVVM 301
+++ +P MV+M
Sbjct: 449 VSYLRFIPGMVIM 461
>gi|393769991|ref|ZP_10358504.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
sp. GXF4]
gi|392724572|gb|EIZ81924.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
sp. GXF4]
Length = 628
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 192/379 (50%), Gaps = 89/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG--- 50
+RT+RQ GL E+V+D FG HSSTSISA L GMAV RDL
Sbjct: 84 IRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAAL----------GMAVARDLDADAA 133
Query: 51 -------KNNHVISVIVEGATIARMSYEAINNAGVLNKAL-------------------- 83
K + I+VI +G+ A M+YEA+NNAG L+ L
Sbjct: 134 KAKGRGVKRRNAIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDNDMSIAPPVGAMSG 193
Query: 84 --KRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIG 141
RL S ++ L + A K Q FE++G +Y+G
Sbjct: 194 YLARLASGGTYQSLRETAKQLGKLLPKALYQRAAAAEEYARSLVVGGGTMFEEMGFHYVG 253
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------- 186
PVDGHNL+ L VLK V+ + G +L+HV+T K K P +
Sbjct: 254 PVDGHNLDQLLPVLKNVRDA-EHGPILLHVVTRKGKGYAPAEASADRYHGVVKFDVVSGV 312
Query: 187 -----------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
TR+F + L D++ M GGTG++LF K P + FDVGIAE
Sbjct: 313 QAKAKPNAPAYTRVFGESLIKAADADDKVVAITAAMPGGTGIDLFGKAHPDKTFDVGIAE 372
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFA GLA EG +PF AIYS+FLQR +DQV HDV LQ LPVRF +DRAGLVGADG T
Sbjct: 373 QHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLDRAGLVGADGAT 432
Query: 283 HCGAFDTTFMACLPNMVVM 301
H GAFD ++ CLPNM VM
Sbjct: 433 HAGAFDLAYLCCLPNMTVM 451
>gi|149185145|ref|ZP_01863462.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. SD-21]
gi|148831256|gb|EDL49690.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. SD-21]
Length = 640
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 198/370 (53%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G A+ + G+
Sbjct: 94 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GFAMANKMQGRPG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L R S+ +
Sbjct: 144 RGIAVIGDGAMSAGMAYEAMNNAEQAGNRLVVILNDNDMSIAPPVGGLSAYLARTVSSSE 203
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+ L A SK ++ + + + ++R + G FE+LG YY+GP+DGHNL+
Sbjct: 204 YLGLRSLASRLSKKLSRRVHSSLEKAEEYARGMVTG--GTLFEELGFYYVGPIDGHNLDH 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------------- 188
L VL+ V+ + G VLIHV+T+K K P + +
Sbjct: 262 LIPVLENVRD-SEQGPVLIHVVTQKGKGYAPAENSADKYHGVAKFDVVTGEQKKSSGGPP 320
Query: 189 ----LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F + L D R M GTG++ F + P + FDVGIAEQH VTFAAG
Sbjct: 321 AYQNVFGETLAKLANDDPRICAITAAMPSGTGVDKFAQAHPDKAFDVGIAEQHGVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAAEG++PF AIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD T+
Sbjct: 381 LAAEGMRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGCTHAGSFDITY 440
Query: 292 MACLPNMVVM 301
+A LPN VVM
Sbjct: 441 LATLPNFVVM 450
>gi|218532564|ref|YP_002423380.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
extorquens CM4]
gi|218524867|gb|ACK85452.1| deoxyxylulose-5-phosphate synthase [Methylobacterium extorquens
CM4]
Length = 658
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 157/382 (41%), Positives = 194/382 (50%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL----- 48
+RT+RQ GL E+ +D FG HSSTSISA L GMAV RDL
Sbjct: 93 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GMAVARDLEEADA 142
Query: 49 ------LGKNNHVISVIVEGATIARMSYEAINNAGVLNKAL------------------- 83
K ++I+VI +G+ A M+YEA+NNAG L+ L
Sbjct: 143 KAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDNDMSIAPPVGAMS 202
Query: 84 ---KRLHSNPQFRQLCQEA--FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLY 138
RL S +R L + A K + + I G FE++G +
Sbjct: 203 AYLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG--TMFEEMGFH 260
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------ 186
Y+GPVDGHNL+ L VLK V+ D G +L+HV+T+K K P +
Sbjct: 261 YVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVV 319
Query: 187 --------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
TR+F + L D + M GGTG++LF K P R FDVG
Sbjct: 320 SGVQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVG 379
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG KPF AIYS+FLQR +DQV HDV LQ L VRF +DRAGLVGAD
Sbjct: 380 IAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGAD 439
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
G TH GAFD ++ CLPNM VM
Sbjct: 440 GATHAGAFDLAYLCCLPNMTVM 461
>gi|254563642|ref|YP_003070737.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
extorquens DM4]
gi|254270920|emb|CAX26925.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
extorquens DM4]
Length = 658
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 157/382 (41%), Positives = 194/382 (50%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL----- 48
+RT+RQ GL E+ +D FG HSSTSISA L GMAV RDL
Sbjct: 93 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GMAVARDLEEADA 142
Query: 49 ------LGKNNHVISVIVEGATIARMSYEAINNAGVLNKAL------------------- 83
K ++I+VI +G+ A M+YEA+NNAG L+ L
Sbjct: 143 KAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDNDMSIAPPVGAMS 202
Query: 84 ---KRLHSNPQFRQLCQEA--FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLY 138
RL S +R L + A K + + I G FE++G +
Sbjct: 203 AYLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG--TMFEEMGFH 260
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------ 186
Y+GPVDGHNL+ L VLK V+ D G +L+HV+T+K K P +
Sbjct: 261 YVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVV 319
Query: 187 --------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
TR+F + L D + M GGTG++LF K P R FDVG
Sbjct: 320 SGVQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVG 379
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG KPF AIYS+FLQR +DQV HDV LQ L VRF +DRAGLVGAD
Sbjct: 380 IAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGAD 439
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
G TH GAFD ++ CLPNM VM
Sbjct: 440 GATHAGAFDLAYLCCLPNMTVM 461
>gi|126727248|ref|ZP_01743084.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
HTCC2150]
gi|126703457|gb|EBA02554.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
HTCC2150]
Length = 646
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 161/372 (43%), Positives = 197/372 (52%), Gaps = 82/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ D FG HSSTSISA L G A RDL G
Sbjct: 98 IRTLRQQGGLSGFTKRSESPFDPFGAAHSSTSISAAL----------GFATARDLGGAPE 147
Query: 54 H----VISVIVEGATIARMSYEAINNAGVLNKAL-KRLHSNPQFRQLCQEAFSSKDKKQK 108
H I+VI +GA A +YEA+NNAG L K L L+ N A SS +
Sbjct: 148 HGIGDAIAVIGDGAMSAGQAYEAMNNAGHLGKRLFVILNDNEMSIAPPVGAMSSYLSRLY 207
Query: 109 FGGQMHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNL 148
G E+ A ++ + G+R FE+LG Y+GP+DGH+L
Sbjct: 208 AGDPFQELKAAAKGAVSLLPEPFQEGARRAKEMLKGMTVGGTLFEELGFSYLGPIDGHDL 267
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
+ L VL+ VK G +LIHVIT+K K P + +
Sbjct: 268 DQLLPVLRTVKTRAT-GPILIHVITQKGKGYAPAEAARDKGHGVSKFDVVTGKQKKTPSN 326
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F K L D++ M GTGLNLF + FP RCFDVGIAEQHAVTFA
Sbjct: 327 APSYTGVFAKALMDEASRDDKITAITAAMPDGTGLNLFAEKFPKRCFDVGIAEQHAVTFA 386
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
A AA G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH GAFD
Sbjct: 387 AAQAAGGMKPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFDI 446
Query: 290 TFMACLPNMVVM 301
F+A LP+ VVM
Sbjct: 447 GFLANLPDFVVM 458
>gi|240141131|ref|YP_002965611.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
extorquens AM1]
gi|240011108|gb|ACS42334.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
extorquens AM1]
Length = 658
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 157/382 (41%), Positives = 194/382 (50%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL----- 48
+RT+RQ GL E+ +D FG HSSTSISA L GMAV RDL
Sbjct: 93 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GMAVARDLEEADA 142
Query: 49 ------LGKNNHVISVIVEGATIARMSYEAINNAGVLNKAL------------------- 83
K ++I+VI +G+ A M+YEA+NNAG L+ L
Sbjct: 143 KAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDNDMSIAPPVGAMS 202
Query: 84 ---KRLHSNPQFRQLCQEA--FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLY 138
RL S +R L + A K + + I G FE++G +
Sbjct: 203 AYLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG--TMFEEMGFH 260
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------ 186
Y+GPVDGHNL+ L VLK V+ D G +L+HV+T+K K P +
Sbjct: 261 YVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVV 319
Query: 187 --------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
TR+F + L D + M GGTG++LF K P R FDVG
Sbjct: 320 SGVQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVG 379
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG KPF AIYS+FLQR +DQV HDV LQ L VRF +DRAGLVGAD
Sbjct: 380 IAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGAD 439
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
G TH GAFD ++ CLPNM VM
Sbjct: 440 GATHAGAFDLAYLCCLPNMTVM 461
>gi|163853706|ref|YP_001641749.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
extorquens PA1]
gi|163665311|gb|ABY32678.1| deoxyxylulose-5-phosphate synthase [Methylobacterium extorquens
PA1]
Length = 658
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 157/382 (41%), Positives = 194/382 (50%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL----- 48
+RT+RQ GL E+ +D FG HSSTSISA L GMAV RDL
Sbjct: 93 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GMAVARDLEEADA 142
Query: 49 ------LGKNNHVISVIVEGATIARMSYEAINNAGVLNKAL------------------- 83
K ++I+VI +G+ A M+YEA+NNAG L+ L
Sbjct: 143 KAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDNDMSIAPPVGAMS 202
Query: 84 ---KRLHSNPQFRQLCQEA--FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLY 138
RL S +R L + A K + + I G FE++G +
Sbjct: 203 AYLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG--TMFEEMGFH 260
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------ 186
Y+GPVDGHNL+ L VLK V+ D G +L+HV+T+K K P +
Sbjct: 261 YVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVV 319
Query: 187 --------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
TR+F + L D + M GGTG++LF K P R FDVG
Sbjct: 320 SGVQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVG 379
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG KPF AIYS+FLQR +DQV HDV LQ L VRF +DRAGLVGAD
Sbjct: 380 IAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGAD 439
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
G TH GAFD ++ CLPNM VM
Sbjct: 440 GATHAGAFDLAYLCCLPNMTVM 461
>gi|84500606|ref|ZP_00998855.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola batsensis
HTCC2597]
gi|84391559|gb|EAQ03891.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola batsensis
HTCC2597]
Length = 642
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 155/375 (41%), Positives = 195/375 (52%), Gaps = 88/375 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G AV RDL G
Sbjct: 94 IRTLRQKDGLSGFTKRSESPYDCFGAAHSSTSISAAL----------GFAVARDLGGAPE 143
Query: 54 H----VISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLH 87
H I+VI +GA A M++EA+NNAG L K L RL+
Sbjct: 144 HGIGDAIAVIGDGAMSAGMAFEAMNNAGSLGKRLIVILNDNDMSIAPPVGAFSNYLSRLY 203
Query: 88 SNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR--ACFFEDLGLYYIGPVDG 145
+ F++L A K E ++++ G FE+LG YIGP+DG
Sbjct: 204 AEEPFQELKAAA---KGMASLLPPPFQEGAKRAKDMLKGMAMGGTLFEELGFSYIGPIDG 260
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------- 186
H++ L +L+ VKA G VL+HV+T+K K P +
Sbjct: 261 HDMSQLLPILRTVKARA-AGPVLVHVVTKKGKGYGPAERASDKGHATAKFDVISGEQKKA 319
Query: 187 -------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAV 226
T +F K L D R M GTGLNL + +P R FDVGIAEQH V
Sbjct: 320 PSNAPSYTSVFGKELVRLAGEDQRVCAVTAAMPDGTGLNLMAERYPSRTFDVGIAEQHGV 379
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFAAGLAA G++PFCAIYS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH G+
Sbjct: 380 TFAAGLAAGGMRPFCAIYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGS 439
Query: 287 FDTTFMACLPNMVVM 301
FD +++ LP VVM
Sbjct: 440 FDVSYLTNLPGFVVM 454
>gi|408376776|ref|ZP_11174380.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium albertimagni
AOL15]
gi|407749466|gb|EKF60978.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium albertimagni
AOL15]
Length = 629
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 144/347 (41%), Positives = 185/347 (53%), Gaps = 69/347 (19%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MR++R+ GL E+ D FG HSSTSISAGL G A RDL G++
Sbjct: 98 MRSLRKKDGLSGFTRRGESPFDPFGAAHSSTSISAGL----------GFATARDLKGQDG 147
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQM 113
HV+ +I +GA A M++EA+NNAG + P L S +
Sbjct: 148 HVVCIIGDGAMSAGMAFEAMNNAGASGR--------PLIVILNDNDMSISASTGALNRHL 199
Query: 114 HEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVIT 173
++ R + FE+ G Y GPVDGH+L+ L +L +++ D G +L+HV+T
Sbjct: 200 SDV----RRNTGTNAGNVFENFGFDYRGPVDGHDLDVLIPLLAELRDEKD-GPILLHVVT 254
Query: 174 EKEKAMLPLKLQQ--------------------------TRLFCKIL------DNR---- 197
K P + + TR+F L D+R
Sbjct: 255 RKGAGYAPAEAAEDKYHGVNPFDVTTGKQNKTEAKAPSYTRVFADALIAEAEKDDRIVAI 314
Query: 198 ---MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQ 254
M GTG++ F FP R FDVGIAEQHAVTFAAGLAA G+KPFCAIYS+FLQR +DQ
Sbjct: 315 TAAMAAGTGVDRFGAAFPDRTFDVGIAEQHAVTFAAGLAAAGMKPFCAIYSTFLQRAYDQ 374
Query: 255 VAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
+ HDV LQ+LPVRFAIDRAGLVG+DGPTH GAFD ++A LP VM
Sbjct: 375 IVHDVALQQLPVRFAIDRAGLVGSDGPTHAGAFDILYLANLPGFTVM 421
>gi|21328654|gb|AAM48660.1| deoxyxylulose-5-phosphate synthase [uncultured marine
proteobacterium]
Length = 630
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 190/368 (51%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +D FG HSSTSISA G V RDL
Sbjct: 89 MGTLRQEGGLSGFTKRSESPYDPFGAAHSSTSISAAH----------GFTVARDLGQDTG 138
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNK----------ALKRLHSNPQFRQL 95
I+VI +G+ A M+YEA+NNAG +LN A+ + S L
Sbjct: 139 DAIAVIGDGSISAGMAYEALNNAGAEGRRMFVILNDNEMSIAPPVGAMSKYMSGLAGTAL 198
Query: 96 CQEAFSSKDKKQKFGGQMHEIDAFSREIEAG---SRACFFEDLGLYYIGPVDGHNLEDLA 152
Q +D + G M + +RE+ G S+ FE+LG YIGP+DGH++ L
Sbjct: 199 AQLNAFGQDIETVLPGPMRDHARRARELVTGAVASQGTIFEELGFEYIGPIDGHDMSQLL 258
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VL+ + G VLIH T K K P +
Sbjct: 259 SVLRSARTRAK-GPVLIHCCTVKGKGYAPAETSADKYHGVAKFDVASGAQMKSGANAPSY 317
Query: 187 TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + L D+++ G GTGL++F + F R FDVGIAEQH VTFAAGLA
Sbjct: 318 TTVFGQTLTKLAEKDSKIVGITAAMPSGTGLDIFAQRFADRMFDVGIAEQHGVTFAAGLA 377
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A GLKPFCAIYS+FLQR +DQ+ HDV LQ LPVRFAIDRAGLVGADG TH GAFD F+
Sbjct: 378 ASGLKPFCAIYSTFLQRGYDQIVHDVALQNLPVRFAIDRAGLVGADGATHAGAFDIGFLT 437
Query: 294 CLPNMVVM 301
LPNMVVM
Sbjct: 438 ALPNMVVM 445
>gi|240138460|ref|YP_002962932.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
extorquens AM1]
gi|240008429|gb|ACS39655.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
thiamin-binding [Methylobacterium extorquens AM1]
Length = 660
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 157/382 (41%), Positives = 194/382 (50%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL----- 48
+RT+RQ GL E+ +D FG HSSTSISA L GMAV RDL
Sbjct: 96 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GMAVARDLEEADA 145
Query: 49 ------LGKNNHVISVIVEGATIARMSYEAINNAGVLNKAL------------------- 83
K ++I+VI +G+ A M+YEA+NNAG L+ L
Sbjct: 146 KAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDNDMSIAPPVGAMS 205
Query: 84 ---KRLHSNPQFRQLCQEA--FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLY 138
RL S +R L + A K + + I G FE++G +
Sbjct: 206 AYLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG--TMFEEMGFH 263
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------ 186
Y+GPVDGHNL+ L VLK V+ D G +L+HV+T+K K P +
Sbjct: 264 YVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVV 322
Query: 187 --------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
TR+F + L D + M GGTG++LF K P R FDVG
Sbjct: 323 SGVQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVG 382
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG KPF AIYS+FLQR +DQV HDV LQ L VRF +DRAGLVGAD
Sbjct: 383 IAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGAD 442
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
G TH GAFD ++ CLPNM VM
Sbjct: 443 GATHAGAFDLAYLCCLPNMTVM 464
>gi|163851366|ref|YP_001639409.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
extorquens PA1]
gi|163662971|gb|ABY30338.1| deoxyxylulose-5-phosphate synthase [Methylobacterium extorquens
PA1]
Length = 657
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 157/382 (41%), Positives = 194/382 (50%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL----- 48
+RT+RQ GL E+ +D FG HSSTSISA L GMAV RDL
Sbjct: 93 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GMAVARDLEEADA 142
Query: 49 ------LGKNNHVISVIVEGATIARMSYEAINNAGVLNKAL------------------- 83
K ++I+VI +G+ A M+YEA+NNAG L+ L
Sbjct: 143 KAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDNDMSIAPPVGAMS 202
Query: 84 ---KRLHSNPQFRQLCQEA--FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLY 138
RL S +R L + A K + + I G FE++G +
Sbjct: 203 AYLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG--TMFEEMGFH 260
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------ 186
Y+GPVDGHNL+ L VLK V+ D G +L+HV+T+K K P +
Sbjct: 261 YVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVV 319
Query: 187 --------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
TR+F + L D + M GGTG++LF K P R FDVG
Sbjct: 320 SGVQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVG 379
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG KPF AIYS+FLQR +DQV HDV LQ L VRF +DRAGLVGAD
Sbjct: 380 IAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGAD 439
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
G TH GAFD ++ CLPNM VM
Sbjct: 440 GATHAGAFDLAYLCCLPNMTVM 461
>gi|218530174|ref|YP_002420990.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
extorquens CM4]
gi|218522477|gb|ACK83062.1| deoxyxylulose-5-phosphate synthase [Methylobacterium extorquens
CM4]
Length = 660
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 157/382 (41%), Positives = 194/382 (50%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL----- 48
+RT+RQ GL E+ +D FG HSSTSISA L GMAV RDL
Sbjct: 96 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GMAVARDLEEADA 145
Query: 49 ------LGKNNHVISVIVEGATIARMSYEAINNAGVLNKAL------------------- 83
K ++I+VI +G+ A M+YEA+NNAG L+ L
Sbjct: 146 KAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDNDMSIAPPVGAMS 205
Query: 84 ---KRLHSNPQFRQLCQEA--FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLY 138
RL S +R L + A K + + I G FE++G +
Sbjct: 206 AYLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG--TMFEEMGFH 263
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------ 186
Y+GPVDGHNL+ L VLK V+ D G +L+HV+T+K K P +
Sbjct: 264 YVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVV 322
Query: 187 --------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
TR+F + L D + M GGTG++LF K P R FDVG
Sbjct: 323 SGVQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVG 382
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG KPF AIYS+FLQR +DQV HDV LQ L VRF +DRAGLVGAD
Sbjct: 383 IAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGAD 442
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
G TH GAFD ++ CLPNM VM
Sbjct: 443 GATHAGAFDLAYLCCLPNMTVM 464
>gi|126734148|ref|ZP_01749895.1| 1-deoxy-D-xylulose-5-phosphate synthase, putative [Roseobacter sp.
CCS2]
gi|126717014|gb|EBA13878.1| 1-deoxy-D-xylulose-5-phosphate synthase, putative [Roseobacter sp.
CCS2]
Length = 640
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 148/369 (40%), Positives = 184/369 (49%), Gaps = 79/369 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G VGRD+
Sbjct: 94 IRTLRQEGGLSGFTKRAESEYDPFGAAHSSTSISAAL----------GFTVGRDMGMPTG 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQM 113
I+VI +G+ A M+YEA+NNAG + L + ++ + SK + M
Sbjct: 144 DAIAVIGDGSISAGMAYEALNNAGAEGRRLFVILNDNEMSIAPPVGAMSKYLSGLYASPM 203
Query: 114 HEIDAFSREIEA----------------------GSRACFFEDLGLYYIGPVDGHNLEDL 151
E+ + EA G FE+LG Y+GP+DGH++ L
Sbjct: 204 GELHKMAEGFEAALPGPLRDHARRARSLVTGMQTGGSGTLFEELGFSYVGPIDGHDMTQL 263
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------------------LQ 185
VL+ + G VLIHV T K K P +
Sbjct: 264 LPVLRAARTRAT-GPVLIHVCTTKGKGYAPAEDSADCGHGVSKFDLATGAQAKSKPNAPS 322
Query: 186 QTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
T++F L M GTG+++ F R FDVGIAEQH VTFAAG+
Sbjct: 323 YTKVFGSALTTEAQADPSIVAVTAAMPSGTGVDIMGARFKDRVFDVGIAEQHGVTFAAGM 382
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
AA GLKPFCAIYS+FLQR +DQV HDV LQ LPVRFAIDRAGLVGADGPTH GAFD +M
Sbjct: 383 AASGLKPFCAIYSTFLQRGYDQVVHDVALQNLPVRFAIDRAGLVGADGPTHAGAFDIGYM 442
Query: 293 ACLPNMVVM 301
+ LPNMVVM
Sbjct: 443 SALPNMVVM 451
>gi|56695164|ref|YP_165511.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria pomeroyi DSS-3]
gi|81350903|sp|Q5LX42.1|DXS_SILPO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|56676901|gb|AAV93567.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria pomeroyi DSS-3]
Length = 642
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 155/375 (41%), Positives = 197/375 (52%), Gaps = 88/375 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKN- 52
+RT+R GL E+ +D FG HSSTSISA L G AV RDL G
Sbjct: 94 IRTLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGGVTP 143
Query: 53 ---NHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLH 87
I+VI +G+ A M++EA+NNAG L K L RL+
Sbjct: 144 EGLGDAIAVIGDGSMSAGMAFEAMNNAGHLKKRLIVILNDNEMSIAPPVGALSNYLSRLY 203
Query: 88 SNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR--ACFFEDLGLYYIGPVDG 145
+ F++L A K E ++E+ G FE+LG YIGP+DG
Sbjct: 204 AEEPFQELKAAA---KGAVSLLPEPFREGAKRAKEMLKGMAVGGTLFEELGFSYIGPIDG 260
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR----------------- 188
H++ L VL+ VKA G +L+HV+T+K K P + + R
Sbjct: 261 HDMGQLLPVLRTVKARAT-GPILLHVLTKKGKGYAPAERARDRGHATAKFDVVTGEQKKA 319
Query: 189 ---------LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAV 226
+F K L D++ M GTGLNLF + +P RCFDVGIAEQH V
Sbjct: 320 PSNAPSYTAVFGKALVDQAARDDKIVAVTAAMPDGTGLNLFAERYPSRCFDVGIAEQHGV 379
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TF+A LAA GLKPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH G+
Sbjct: 380 TFSAALAAGGLKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGS 439
Query: 287 FDTTFMACLPNMVVM 301
FD ++A LP MVVM
Sbjct: 440 FDIAYLANLPGMVVM 454
>gi|418064382|ref|ZP_12701881.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
extorquens DSM 13060]
gi|373547554|gb|EHP74276.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
extorquens DSM 13060]
Length = 496
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 156/382 (40%), Positives = 192/382 (50%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL----- 48
+RT+RQ GL E+ +D FG HSSTSISA L GMAV RDL
Sbjct: 96 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GMAVARDLEEADA 145
Query: 49 ------LGKNNHVISVIVEGATIARMSYEAINNAGVLNKAL------------------- 83
K ++I+VI +G+ A M+YEA+NNAG L+ L
Sbjct: 146 KAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDNDMSIAPPVGAMS 205
Query: 84 ---KRLHSNPQFRQLCQEA--FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLY 138
RL S +R L + A K + + I G FE++G +
Sbjct: 206 AYLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGG--GTMFEEMGFH 263
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------ 186
Y+GPVDGHNL+ L VLK V+ D G +L+HV+T+K K P +
Sbjct: 264 YVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVV 322
Query: 187 --------------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
TR+F + L M GGTG++LF K P R FDVG
Sbjct: 323 SGVQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVG 382
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG KPF AIYS+FLQR +DQV HDV LQ L VRF +DRAGLVGAD
Sbjct: 383 IAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGAD 442
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
G TH GAFD ++ CLPNM VM
Sbjct: 443 GATHAGAFDLAYLCCLPNMTVM 464
>gi|346995044|ref|ZP_08863116.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. TW15]
Length = 642
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 155/374 (41%), Positives = 198/374 (52%), Gaps = 86/374 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKN- 52
+RT+R GL E+ +D FG HSSTSISA L G AV RDL G
Sbjct: 94 IRTLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGGVTP 143
Query: 53 ---NHVISVIVEGATIARMSYEAINNAGVLNKALKRLH--------------SNPQFRQL 95
I+VI +G+ A M++EA+NNAG LNK L + SN R
Sbjct: 144 EGLGDAIAVIGDGSMSAGMAFEAMNNAGHLNKRLIVILNDNEMSIAPPVGALSNYLSRIY 203
Query: 96 CQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR---------ACFFEDLGLYYIGPVDGH 146
+E F D K G + + RE ++ FE+LG Y+GP+DGH
Sbjct: 204 AEEPF--HDLKAAAKGAVSLLPEPFREGAKRAKDMLKGMAMGGTLFEELGFSYLGPIDGH 261
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------- 186
+L+ L VL+ VKA G +LIHV+T+K K P + +
Sbjct: 262 DLDQLLPVLRAVKAKAT-GPILIHVLTKKGKGYAPAEQARDKGHATAKFDVVTGEQKKAP 320
Query: 187 ------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T +F K L D++ M GTGLNLF + +P RCFDV IAEQH VT
Sbjct: 321 SNAPSYTSVFGKTLVEEAARDDKIVAVTAAMPDGTGLNLFAERYPSRCFDVAIAEQHGVT 380
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
F+A LAA G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFA+DRAGLVGADG TH G+F
Sbjct: 381 FSAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAVDRAGLVGADGATHAGSF 440
Query: 288 DTTFMACLPNMVVM 301
D ++A LP MVVM
Sbjct: 441 DIAYLANLPGMVVM 454
>gi|114765816|ref|ZP_01444909.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelagibaca bermudensis
HTCC2601]
gi|114541815|gb|EAU44852.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. HTCC2601]
Length = 641
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 156/374 (41%), Positives = 200/374 (53%), Gaps = 86/374 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG--- 50
+RT+R+ GL E+ +D FG GHSSTSISA L G AV RDL G
Sbjct: 94 IRTLRKKGGLSGFTKRSESPYDPFGAGHSSTSISAAL----------GFAVARDLGGVCD 143
Query: 51 -KNNHVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQL 95
I+VI +GA A M+YEA+NNAG L K L + ++ + R
Sbjct: 144 TGAGDAIAVIGDGAMSAGMAYEAMNNAGHLGKRLIVILNDNEMSIAPPTGAMSSYLSRLY 203
Query: 96 CQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR---------ACFFEDLGLYYIGPVDGH 146
+E F +D K G + + RE ++ FE+LG Y+GP+DGH
Sbjct: 204 AEEPF--QDLKAAAKGAVSLLPPPFREGAKRAKEMLKGMTVGGTLFEELGFDYLGPLDGH 261
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------- 186
+L L VL+ V+A + +L+HV+T+K K P +
Sbjct: 262 DLHQLLPVLRMVRARANK-PILLHVLTKKGKGYGPAEESADRGHARAKFDVATGEQKKAP 320
Query: 187 ------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F K L D+R M GTGL+L + +P R FDVGIAEQH VT
Sbjct: 321 SNAPAYTKVFAKELTRLAAEDSRICAVTAAMPDGTGLDLMAERYPSRVFDVGIAEQHGVT 380
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLAA G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH GA+
Sbjct: 381 FAAGLAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAY 440
Query: 288 DTTFMACLPNMVVM 301
D FMA LP MVVM
Sbjct: 441 DIAFMANLPGMVVM 454
>gi|418062607|ref|ZP_12700377.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
extorquens DSM 13060]
gi|373563851|gb|EHP90009.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
extorquens DSM 13060]
Length = 515
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 157/382 (41%), Positives = 194/382 (50%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDL----- 48
+RT+RQ GL E+ +D FG HSSTSISA L GMAV RDL
Sbjct: 93 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GMAVARDLEEADA 142
Query: 49 ------LGKNNHVISVIVEGATIARMSYEAINNAGVLNKAL------------------- 83
K ++I+VI +G+ A M+YEA+NNAG L+ L
Sbjct: 143 KAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDNDMSIAPPVGAMS 202
Query: 84 ---KRLHSNPQFRQLCQEA--FSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLY 138
RL S +R L + A K + + I G FE++G +
Sbjct: 203 AYLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG--TMFEEMGFH 260
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------ 186
Y+GPVDGHNL+ L VLK V+ D G +L+HV+T+K K P +
Sbjct: 261 YVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVV 319
Query: 187 --------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
TR+F + L D + M GGTG++LF K P R FDVG
Sbjct: 320 SGVQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVG 379
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG KPF AIYS+FLQR +DQV HDV LQ L VRF +DRAGLVGAD
Sbjct: 380 IAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGAD 439
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
G TH GAFD ++ CLPNM VM
Sbjct: 440 GATHAGAFDLAYLCCLPNMTVM 461
>gi|84515019|ref|ZP_01002382.1| deoxyxylulose-5-phosphate synthase [Loktanella vestfoldensis SKA53]
gi|84511178|gb|EAQ07632.1| deoxyxylulose-5-phosphate synthase [Loktanella vestfoldensis SKA53]
Length = 644
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 152/375 (40%), Positives = 196/375 (52%), Gaps = 91/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G VGRDL
Sbjct: 94 IRTLRQEGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GFTVGRDLGMPTG 143
Query: 54 HVISVIVEGATIARMSYEAINNAG----------------------VLNKALKRLHSNP- 90
I+VI +G+ A M+YEA+NNAG ++K L L+++P
Sbjct: 144 DAIAVIGDGSISAGMAYEAMNNAGSEGRRLFVILNDNEMSIAPPVGAMSKYLSGLYASPL 203
Query: 91 -QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREI----EAGSRACFFEDLGLYYIGPVDG 145
++ E F S G + + +R++ ++G+ FE LG YIGP+DG
Sbjct: 204 GDLHKMA-EGFESV-----LPGPIRDHARRARQLVTGMQSGNTGTLFESLGFSYIGPIDG 257
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------- 186
H++ L VL+ K G VLIHV T+K K P +
Sbjct: 258 HDMSQLLPVLRAAKTRAT-GPVLIHVCTKKGKGYAPAEQSADKYHGVAKFNVASGEQAKS 316
Query: 187 -------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAV 226
T++F L D R M GTG+++ + F R FDVG+AEQH V
Sbjct: 317 RPNAPSYTKIFGTALTVEAQHDPRIVAVTAAMPNGTGVDIMGQRFGSRVFDVGMAEQHGV 376
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFAAG+AA GLKPFCAIYS+FLQR +DQ+ HDV LQ LPVRFAIDRAGLVGADGPTH G+
Sbjct: 377 TFAAGMAASGLKPFCAIYSTFLQRGYDQIVHDVALQNLPVRFAIDRAGLVGADGPTHAGS 436
Query: 287 FDTTFMACLPNMVVM 301
FD ++A LPNMVVM
Sbjct: 437 FDIGYLAALPNMVVM 451
>gi|259418101|ref|ZP_05742020.1| 1-deoxy-D-xylulose-5-phosphate synthase [Silicibacter sp.
TrichCH4B]
gi|259347007|gb|EEW58821.1| 1-deoxy-D-xylulose-5-phosphate synthase [Silicibacter sp.
TrichCH4B]
Length = 642
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 156/372 (41%), Positives = 195/372 (52%), Gaps = 82/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ D FG HSSTSISA L G +V RDL G
Sbjct: 94 IRTLRMKDGLSGFTKRSESAFDPFGAAHSSTSISAAL----------GFSVARDLGGVTE 143
Query: 54 H----VISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQK 108
I+VI +GA A M++EA+NNAG L K L L+ N A SS +
Sbjct: 144 EGLGDAIAVIGDGAMSAGMAFEAMNNAGHLGKRLIVILNDNEMSIAPPVGALSSYLSRLY 203
Query: 109 FGGQMHEIDAFSREI---------EAGSRA-----------CFFEDLGLYYIGPVDGHNL 148
H++ A ++ E RA FE LG YIGP+DGH++
Sbjct: 204 TEAPFHDLKAAAKGAVSLLPEPFREGAKRAKDMLKGMAMGGTLFESLGFSYIGPIDGHDM 263
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
+ L VL+ VKA + G +LIH +T+K K P ++ +
Sbjct: 264 DQLLPVLRTVKARAN-GPILIHAVTKKGKGYRPAEVARDKGHATAKFDMVTGEQKKAPSN 322
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F K L D++ M GTGLNL + +P R FDVGIAEQH VTFA
Sbjct: 323 APSYTSIFGKTLAELAAQDSKICAVTAAMPDGTGLNLMAERYPSRTFDVGIAEQHGVTFA 382
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
A LAA G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 383 AALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDI 442
Query: 290 TFMACLPNMVVM 301
FMA LP MVVM
Sbjct: 443 GFMANLPGMVVM 454
>gi|163760422|ref|ZP_02167504.1| deoxyxylulose-5-phosphate synthase [Hoeflea phototrophica DFL-43]
gi|162282373|gb|EDQ32662.1| deoxyxylulose-5-phosphate synthase [Hoeflea phototrophica DFL-43]
Length = 675
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/368 (41%), Positives = 188/368 (51%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +D FG HSSTSISAGL G A R +
Sbjct: 123 MATLRQDGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GFATARSFGFGDG 172
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNP-------QFRQLCQEAF 100
I+VI +GA A M+YEA+NNAG + K L + +P LC +A
Sbjct: 173 DAIAVIGDGAMSAGMAYEAMNNAGTMGKRLFVILNDNEMSISPSVGAFSKHLSALCTQAP 232
Query: 101 S-SKDKKQKFGGQM----HEIDAFSREIEAGSRA---CFFEDLGLYYIGPVDGHNLEDLA 152
+ D + M + A G+ A FE +G YIGPVDGH+L L
Sbjct: 233 AIGMDVMMRKAASMLPEPFKTGAARARQAVGALAGTSSLFEHMGFSYIGPVDGHDLPQLL 292
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
+L+ V+ + D G VLIH IT K P +
Sbjct: 293 AILRTVRNVAD-GPVLIHAITRKGAGYAPAENSADKYHGVGSFDAETGALSKSKPSAPAY 351
Query: 187 TRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F K L + M GTGL++F + P R FDVGIAEQHAVTFAAGLA
Sbjct: 352 TKVFAKALCDEADRDPGVVAITAAMASGTGLDVFSQAHPERMFDVGIAEQHAVTFAAGLA 411
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A G+KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADGPTH GAFD +++
Sbjct: 412 AAGMKPFCAIYSTFLQRAYDQIVHDVAIQGLPVRFAIDRAGLVGADGPTHAGAFDVAYLS 471
Query: 294 CLPNMVVM 301
LP VM
Sbjct: 472 NLPGFTVM 479
>gi|91762254|ref|ZP_01264219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
ubique HTCC1002]
gi|91718056|gb|EAS84706.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
ubique HTCC1002]
Length = 637
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 199/378 (52%), Gaps = 97/378 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
++T+RQ GL E+ +D FG HSSTSIS+ L GMA L K++
Sbjct: 91 IKTLRQGNGLSGFTKRSESEYDPFGAAHSSTSISSAL----------GMAEANKLSNKSS 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKA--------------LKRLHSNPQ 91
++I+VI +GA A M+YEA+NNAG +LN L +L +
Sbjct: 141 NIIAVIGDGAISAGMAYEAMNNAGASKTKMIVILNDNDMSIAKPVGAMRTYLAKLLTGKI 200
Query: 92 FRQLCQ------EAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDG 145
+ L + AFS ++F + + + F R G F LG YY+GP+DG
Sbjct: 201 YFSLRETFKLIVSAFS-----KRFSAKAGKAEDFLRSAVTG--GTLFNSLGFYYVGPIDG 253
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------------- 179
H+L L +LK + G ++IH+ T+K EKA
Sbjct: 254 HDLSTLIPILKNARDSKHQGPIMIHIKTQKGKGYSYAEKASDHYHGVSKFNVVTGEQVKS 313
Query: 180 ---LPLKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQ 223
LP T++F L D++ M GGTG+++F K FP R FDVGIAEQ
Sbjct: 314 GTNLP---AYTKVFANTLVKHAERDSKVVGVTAAMPGGTGMDIFAKDFPKRMFDVGIAEQ 370
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
HAVTFAAGLA EG KP+ AIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADG TH
Sbjct: 371 HAVTFAAGLATEGYKPYVAIYSTFLQRAYDQVVHDVAIQSLPVRFIIDRAGLVGADGSTH 430
Query: 284 CGAFDTTFMACLPNMVVM 301
G+FD T+++ LPN +VM
Sbjct: 431 AGSFDITYLSTLPNFIVM 448
>gi|99082760|ref|YP_614914.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. TM1040]
gi|118595619|sp|Q1GCG4.1|DXS_SILST RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|99039040|gb|ABF65652.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. TM1040]
Length = 645
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 192/372 (51%), Gaps = 82/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ D FG HSSTSISA L G +V RDL G
Sbjct: 94 IRTLRMKDGLSGFTKRSESAFDPFGAAHSSTSISAAL----------GFSVARDLGGVTE 143
Query: 54 H----VISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQK 108
I+VI +GA A M++EA+NNAG L K L L+ N A SS +
Sbjct: 144 EGLGDAIAVIGDGAMSAGMAFEAMNNAGHLGKRLIVILNDNEMSIAPPVGALSSYLSRLY 203
Query: 109 FGGQMHEIDAFSREI---------EAGSRA-----------CFFEDLGLYYIGPVDGHNL 148
H++ A ++ E RA FE LG YIGP+DGH++
Sbjct: 204 TEAPFHDLKAAAKGAVSLLPEPFREGAKRAKDMLKGMAMGGTLFESLGFSYIGPIDGHDM 263
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
+ L VL+ VKA G +LIH +T+K K P ++ +
Sbjct: 264 DQLLPVLRTVKARA-AGPILIHAVTKKGKGYRPAEVARDKGHATAKFDMVTGEQKKAPSN 322
Query: 187 ----TRLFCKILDN-------------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F K L + M GTGLNL + +P R FDVGIAEQH VTFA
Sbjct: 323 APSYTSVFGKTLTDLAAQDSKICAVTAAMPDGTGLNLMAERYPSRTFDVGIAEQHGVTFA 382
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
A LAA G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 383 AALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDI 442
Query: 290 TFMACLPNMVVM 301
FMA LP MVVM
Sbjct: 443 AFMANLPGMVVM 454
>gi|428185733|gb|EKX54585.1| 1-deoxy-D-xylulose 5-phosphate synthase [Guillardia theta CCMP2712]
Length = 756
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 156/380 (41%), Positives = 194/380 (51%), Gaps = 91/380 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKN-NH 54
T+RQ GL E+ D FG GHSSTSISA L GM+V +DL GK N+
Sbjct: 163 TLRQWGGLSGFTKRKESEFDCFGAGHSSTSISAAL----------GMSVAKDLTGKPVNN 212
Query: 55 VISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQF--------------------- 92
I+VI +GA M+YEA+N AG LN + + L+ N Q
Sbjct: 213 CIAVIGDGAITGGMAYEAMNCAGYLNQRMIVILNENGQVSLPTGTPSAAGVVPAGALSGS 272
Query: 93 --RQLCQEAFSSKDKKQKFGGQM---------HEIDAFSREIEAGSR-ACFFEDLGLYYI 140
R L F K ++ +ID F R +G A FE+LG YY+
Sbjct: 273 TSRILSSRPFQDARSVAKTLTKLLPEDLQKITRKIDEFGRGFVSGEEGAVLFEELGFYYL 332
Query: 141 GPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP-LKLQQ------------- 186
GP+DGH+LE+L +L+ ++ VL+HV TEK LP LK
Sbjct: 333 GPIDGHDLENLIPILENLRDSESKKPVLLHVKTEKGYGYLPALKASDKMHGVAQFDIATG 392
Query: 187 ------------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIA 221
T +F L M GGTGL+ F K FP R FDVGIA
Sbjct: 393 KQKKPKSGPPSYTSVFADTLVELARQDPTVCGITAAMPGGTGLDKFGKIFPKRTFDVGIA 452
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTFAAG+A +GLKPFCAIYS+FLQR +DQV HD +Q LPVRF +DRAGLVG DGP
Sbjct: 453 EQHAVTFAAGMAVDGLKPFCAIYSTFLQRGYDQVIHDCIIQSLPVRFMVDRAGLVGNDGP 512
Query: 282 THCGAFDTTFMACLPNMVVM 301
TH G FD ++ LPN+V+M
Sbjct: 513 THHGCFDLAYLGTLPNIVIM 532
>gi|114566129|ref|YP_753283.1| deoxyxylulose-5-phosphate synthase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|122318773|sp|Q0AZE2.1|DXS_SYNWW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|114337064|gb|ABI67912.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 638
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 200/372 (53%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +DAF GHSSTSISA L GMA+ RDL G++N
Sbjct: 89 MSTLRQYGGISGFPKVEESEYDAFNTGHSSTSISAAL----------GMALARDLQGQSN 138
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
V++VI +GA A M++EA+N N G ++ L RL ++P
Sbjct: 139 SVVAVIGDGALTAGMAFEALNHAGQEDSDLIVVLNDNEMSISKNVGAMSAYLNRLRTDPS 198
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGH 146
+ + +E S ++ G + D + G FE+LG YIGPV+GH
Sbjct: 199 YSRTKEEIESVLNRIPGIGPNLARAAGKFKDTVKYLMVPG---IIFEELGFTYIGPVNGH 255
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP-------------------LKLQQ- 186
+L +L VL +K + P +L+H IT+K K P +L++
Sbjct: 256 DLAELKAVLSNIKKMKGP--ILLHTITQKGKGYEPAFQKPDIFHGVGPFDVDTGTQLKKS 313
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F + DN+ M GTGL+ F ++FP R FDVGI EQHAVT A
Sbjct: 314 LKTYTEIFGDFMLNQAQRDNKLVAITAAMTSGTGLSEFSRNFPERFFDVGICEQHAVTLA 373
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AG+A+ GL+P A+YS+FLQR +DQ+ HDV LQKLPV FAIDRAGLVG DGPTH GAFD
Sbjct: 374 AGMASSGLRPVVAVYSTFLQRAYDQIVHDVALQKLPVIFAIDRAGLVGEDGPTHHGAFDF 433
Query: 290 TFMACLPNMVVM 301
+++ +PN+++M
Sbjct: 434 SYLRHIPNLIIM 445
>gi|260431853|ref|ZP_05785824.1| 1-deoxy-D-xylulose-5-phosphate synthase [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415681|gb|EEX08940.1| 1-deoxy-D-xylulose-5-phosphate synthase [Silicibacter
lacuscaerulensis ITI-1157]
Length = 642
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 157/374 (41%), Positives = 198/374 (52%), Gaps = 86/374 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKN- 52
+RT+RQ GL E+ +D FG HSSTSISA L G AV RDL G
Sbjct: 94 IRTLRQKGGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGGVTP 143
Query: 53 ---NHVISVIVEGATIARMSYEAINNAGVLNKALKRLH--------------SNPQFRQL 95
I+VI +G+ A M++EA+NNAG L K L + SN R
Sbjct: 144 EGLGDAIAVIGDGSMSAGMAFEAMNNAGHLKKRLIVILNDNEMSIAPPVGALSNYLSRIY 203
Query: 96 CQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR---------ACFFEDLGLYYIGPVDGH 146
+E F D K G + + RE ++ FE+LG Y+GP+DGH
Sbjct: 204 AEEPF--HDLKAAAKGAVSLLPEPFREGAKRAKEMLKGMAVGGTLFEELGFSYVGPIDGH 261
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL-----------------QQ--- 186
+L+ L VL+ VKA G +LIH +T+K K P + QQ
Sbjct: 262 DLDQLLPVLRTVKARAT-GPILIHALTKKGKGYAPAEQARDKGHATAKFDVVTGKQQKAP 320
Query: 187 ------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T +F K L D++ M GTGLNLF + +P RCFDV IAEQH VT
Sbjct: 321 SNAPSYTSVFGKTLVDEASRDDKIVAVTAAMPDGTGLNLFAERYPSRCFDVAIAEQHGVT 380
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
F+A LAA GLKPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH G+F
Sbjct: 381 FSAALAAGGLKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSF 440
Query: 288 DTTFMACLPNMVVM 301
D +++ LP MVVM
Sbjct: 441 DIAYLSNLPGMVVM 454
>gi|84685989|ref|ZP_01013885.1| 1-deoxy-D-xylulose-5-phosphate synthase [Maritimibacter
alkaliphilus HTCC2654]
gi|84666082|gb|EAQ12556.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
HTCC2654]
Length = 648
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 154/372 (41%), Positives = 197/372 (52%), Gaps = 82/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +IRQ GL E+ +D FG HSSTSISA L G AV RDL G
Sbjct: 100 MTSIRQKDGLSGFTKRTESPYDPFGAAHSSTSISAAL----------GFAVARDLGGSPE 149
Query: 54 H----VISVIVEGATIARMSYEAINNAGVLNKAL-KRLHSNPQFRQLCQEAFSSKDKKQK 108
+ I+VI +GA A M++EA+NNAG LNK L L+ N A S+ +
Sbjct: 150 NGIGDCIAVIGDGAMSAGMAFEAMNNAGHLNKRLIVVLNDNEMSIAPPVGALSTYLSRLY 209
Query: 109 FGGQMHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNL 148
G E A ++ + G+R FE+LG Y+GP+DGH++
Sbjct: 210 AGEPFQEFKAAAKGAVRLLPPPFQEGARRAKEMLKGMTVGGTMFEELGFSYVGPIDGHDM 269
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
+ LA VL+ VKA G VLIH IT K K P + +
Sbjct: 270 DQLAQVLRTVKARAT-GPVLIHAITRKGKGYRPAEERDDKGHATAKFDVPTGKQHKAPSN 328
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F K L D++ M GTG+++F FP R FDVGIAEQH VTF+
Sbjct: 329 APSYTSVFGKTLTKLGETDDKIVAVTAAMPDGTGVDIFGARFPSRTFDVGIAEQHGVTFS 388
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA G++PFCAIYS+FLQR +DQV HDV +Q+LPVRF IDRAGLVGADG TH G+FD
Sbjct: 389 AGLAAGGMRPFCAIYSTFLQRGYDQVVHDVAIQRLPVRFMIDRAGLVGADGATHAGSFDI 448
Query: 290 TFMACLPNMVVM 301
++A LP+ V+M
Sbjct: 449 AYLANLPDFVIM 460
>gi|110677932|ref|YP_680939.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter denitrificans
OCh 114]
gi|118595488|sp|Q16CP0.1|DXS2_ROSDO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
synthase 2; Short=DXPS 2
gi|109454048|gb|ABG30253.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter denitrificans
OCh 114]
Length = 642
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 158/383 (41%), Positives = 197/383 (51%), Gaps = 104/383 (27%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG--- 50
+RT+R GL E+ +D FG HSSTSISA L G AV RDL G
Sbjct: 94 IRTLRMKGGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGGVVP 143
Query: 51 -KNNHVISVIVEGATIARMSYEAINNAGVLNKA----------------------LKRLH 87
I+VI +G+ A M+YEA+NNAG L K L RL+
Sbjct: 144 EGLGDAIAVIGDGSMSAGMAYEAMNNAGHLKKRMIVILNDNEMSIAPPTGAMSSYLSRLY 203
Query: 88 SNPQFR----------QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGL 137
S F+ L E F K+ K D G+ FE+LG
Sbjct: 204 SGEPFQDFKAAAKGAVSLLPEPFREGAKRAK--------DMLKGMAVGGT---LFEELGF 252
Query: 138 YYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP---------------- 181
YIGP+DGH+L+ L +L+ VKA G ++IH +T+K K P
Sbjct: 253 SYIGPIDGHDLDQLLPLLRTVKARAT-GPIMIHALTKKGKGYAPAETARDKGHATAKFDV 311
Query: 182 LKLQQTR----------LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDV 218
L QQT+ +F + L D++ M GTGLNLF + FP RCFDV
Sbjct: 312 LTGQQTKAPSNAPSYTKVFAQSLLEEATKDDKICAVTAAMPDGTGLNLFAERFPSRCFDV 371
Query: 219 GIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGA 278
GIAEQH VTF+A LAA G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGA
Sbjct: 372 GIAEQHGVTFSAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGA 431
Query: 279 DGPTHCGAFDTTFMACLPNMVVM 301
DG TH G+FD ++A LP VVM
Sbjct: 432 DGATHAGSFDIAYLANLPGFVVM 454
>gi|255262871|ref|ZP_05342213.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassiobium sp. R2A62]
gi|255105206|gb|EET47880.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassiobium sp. R2A62]
Length = 642
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/378 (41%), Positives = 198/378 (52%), Gaps = 94/378 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G AV RDL G
Sbjct: 94 IRTLRQRDGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGGAPE 143
Query: 54 H----VISVIVEGATIARMSYEAINNAGVLNKA----------------------LKRLH 87
H I+VI +G+ A M+YEA+NNAG L K L RL+
Sbjct: 144 HGLGDAIAVIGDGSMSAGMAYEAMNNAGHLKKRMIVILNDNEMSIAPPVGAMSSYLSRLY 203
Query: 88 SNPQFRQL---CQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR--ACFFEDLGLYYIGP 142
+ F++L + A S + + G + ++E+ G FE+LG Y+GP
Sbjct: 204 AGAPFQELKAAAKGAVSLLPEPFQLGAKR------AKEMLKGMTVGGTLFEELGFSYLGP 257
Query: 143 VDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------- 186
+DGH++E L VL+ VK G +LIH IT+K K P +
Sbjct: 258 IDGHDMEQLLGVLRTVKDRAT-GPILIHAITKKGKGYAPAEAASDKGHGVSKFDMVTGEQ 316
Query: 187 ----------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQ 223
T +F K L D++ M GTGL F + RCFDVGIAEQ
Sbjct: 317 KKAPSNAPSYTSVFSKALLDLAAKDDKICAVTAAMPDGTGLKQFMDRYASRCFDVGIAEQ 376
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
HAVTF+AGLAA G++PFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH
Sbjct: 377 HAVTFSAGLAAGGMRPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATH 436
Query: 284 CGAFDTTFMACLPNMVVM 301
GAFD F++ LP VVM
Sbjct: 437 AGAFDVGFLSNLPGFVVM 454
>gi|126463555|ref|YP_001044669.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
ATCC 17029]
gi|126105219|gb|ABN77897.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
ATCC 17029]
Length = 637
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 197/368 (53%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISA VG A R++ G
Sbjct: 94 IRTLRQGGGLSGFTKRSESPYDCFGAGHSSTSISAA----------VGFAAAREMGGDTG 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
++VI +G+ A M++EA+N+ G L N+ + L+ N A SS + G
Sbjct: 144 DAVAVIGDGSMSAGMAFEALNHGGHLKNRVIVILNDNEMSIAPPVGALSSYLSRLYAGAP 203
Query: 113 MHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDLA 152
+ A ++ + G+R FE+LG Y+GP+DGH+L+ L
Sbjct: 204 FQDFKAAAKGALGLLPEPFQEGARRAKEMLKSVTVGGTLFEELGFSYVGPIDGHDLDQLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VL+ VK VLIHVIT+K + P + +
Sbjct: 264 PVLRTVKQRAH-APVLIHVITKKGRGYAPAEAARDRGHATNKFNVLTGAQVKPVSNAPSY 322
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D R M GTGLNLF + FP R FDVGIAEQHAVTF+A LA
Sbjct: 323 TKVFAQSLIKEAEVDERICAVTAAMPDGTGLNLFGERFPKRTFDVGIAEQHAVTFSAALA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A G++PFCAIYS+FLQR +DQ+ HDV +Q+LPVRFAIDRAGLVGADG TH G+FD F++
Sbjct: 383 AGGMRPFCAIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLS 442
Query: 294 CLPNMVVM 301
LP +VVM
Sbjct: 443 NLPGIVVM 450
>gi|221640629|ref|YP_002526891.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
KD131]
gi|221161410|gb|ACM02390.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Rhodobacter sphaeroides
KD131]
Length = 637
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 197/368 (53%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISA VG A R++ G
Sbjct: 94 IRTLRQGGGLSGFTKRSESPYDCFGAGHSSTSISAA----------VGFAAAREMGGDTG 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
++VI +G+ A M++EA+N+ G L N+ + L+ N A SS + G
Sbjct: 144 DAVAVIGDGSMSAGMAFEALNHGGHLKNRVIVILNDNEMSIAPPVGALSSYLSRLYAGAP 203
Query: 113 MHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDLA 152
+ A ++ + G+R FE+LG Y+GP+DGH+L+ L
Sbjct: 204 FQDFKAAAKGALGLLPEPFQEGARRAKEMLKSVTVGGTLFEELGFSYVGPIDGHDLDQLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VL+ VK VLIHVIT+K + P + +
Sbjct: 264 PVLRTVKQRAH-APVLIHVITKKGRGYAPAEAARDRGHATNKFNVLTGAQVKPVSNAPSY 322
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D R M GTGLNLF + FP R FDVGIAEQHAVTF+A LA
Sbjct: 323 TKVFAQSLIKEAEVDERICAVTAAMPDGTGLNLFGERFPKRTFDVGIAEQHAVTFSAALA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A G++PFCAIYS+FLQR +DQ+ HDV +Q+LPVRFAIDRAGLVGADG TH G+FD F++
Sbjct: 383 AGGMRPFCAIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLS 442
Query: 294 CLPNMVVM 301
LP +VVM
Sbjct: 443 NLPGIVVM 450
>gi|254466411|ref|ZP_05079822.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
Y4I]
gi|206687319|gb|EDZ47801.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
Y4I]
Length = 642
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 192/372 (51%), Gaps = 82/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG--- 50
+RT+R GL E+ +D FG HSSTSISA L G AV RDL G
Sbjct: 94 IRTLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGGVIP 143
Query: 51 -KNNHVISVIVEGATIARMSYEAINNAGVLNKAL-KRLHSNPQFRQLCQEAFSSKDKKQK 108
N I+VI +G+ A M++EA+NNAG L K L L+ N A SS +
Sbjct: 144 EGNGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLFVILNDNEMSIAPPVGALSSYLSRLY 203
Query: 109 FGGQMHEIDAFSREI---------EAGSRA-----------CFFEDLGLYYIGPVDGHNL 148
G E+ A ++ E RA FE LG Y+GP+DGH+L
Sbjct: 204 AGEPFQELKAAAKGAVSLLPEPFREGAKRAKDMLKGMAVGGTLFEALGFSYLGPIDGHDL 263
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR-------------------- 188
L VL+ VKA G +LIHV+T+K K P + + +
Sbjct: 264 NQLLPVLRTVKARAT-GPILIHVLTKKGKGYGPAERARDKGHATAKFDMVTGEQKKAPSN 322
Query: 189 --LFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+ + N M GTGL+L + +P RCFDVGIAEQH VTFA
Sbjct: 323 APSYTSVFGNELVKLAAKDDKICAVTAAMPDGTGLSLMAERYPSRCFDVGIAEQHGVTFA 382
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
A LAA G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 383 AALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDI 442
Query: 290 TFMACLPNMVVM 301
FMA LP MVVM
Sbjct: 443 AFMANLPGMVVM 454
>gi|429207275|ref|ZP_19198534.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodobacter sp. AKP1]
gi|428189650|gb|EKX58203.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodobacter sp. AKP1]
Length = 637
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 197/368 (53%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISA VG A R++ G
Sbjct: 94 IRTLRQGGGLSGFTKRSESPYDCFGAGHSSTSISAA----------VGFAAAREMGGDTG 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
++VI +G+ A M++EA+N+ G L N+ + L+ N A SS + G
Sbjct: 144 DAVAVIGDGSMSAGMAFEALNHGGHLKNRVIVILNDNEMSIAPPVGALSSYLSRLYAGAP 203
Query: 113 MHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDLA 152
+ A ++ + G+R FE+LG Y+GP+DGH+L+ L
Sbjct: 204 FQDFKAAAKGALGLLPEPFQEGARRAKEMLKSVTVGGTLFEELGFSYVGPIDGHDLDQLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VL+ VK VLIHVIT+K + P + +
Sbjct: 264 PVLRTVKQRAH-APVLIHVITKKGRGYAPAEAARDRGHATNKFNVLTGAQVKPVSNAPSY 322
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D R M GTGLNLF + FP R FDVGIAEQHAVTF+A LA
Sbjct: 323 TKVFAQSLIKEAEVDERICAVTAAMPDGTGLNLFGERFPKRTFDVGIAEQHAVTFSAALA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A G++PFCAIYS+FLQR +DQ+ HDV +Q+LPVRFAIDRAGLVGADG TH G+FD F++
Sbjct: 383 AGGMRPFCAIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLS 442
Query: 294 CLPNMVVM 301
LP +VVM
Sbjct: 443 NLPGIVVM 450
>gi|406707992|ref|YP_006758344.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
HIMB59]
gi|406653768|gb|AFS49167.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
HIMB59]
Length = 621
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 196/366 (53%), Gaps = 75/366 (20%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+ T+R+ GL E+++D FG HSSTSISA L G+AV RDL K+
Sbjct: 88 IHTLRKKNGLSGFTKRSESIYDPFGAAHSSTSISANL----------GIAVARDLQKKSF 137
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK-ALKRLHSNPQ--------FRQLCQEAFSSK- 103
VIS+I +GA A M++E +NN G L+K +L L+ N + SSK
Sbjct: 138 DVISIIGDGAISAGMAFEGLNNIGHLSKNSLIILNDNEMSIAKPVGAMSKYLVNLLSSKT 197
Query: 104 -----DKKQKFGGQM-HEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLA 152
D + F ++ E+ F+++ E + FE+LG+ YIGP+DGHNL+ L
Sbjct: 198 YENIRDVVKNFTKKLPDEVGNFAKKTEGYLKGYLTGNTLFEELGMNYIGPIDGHNLDLLI 257
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------------LQQTRLFCK 192
+ ++ K G V +H+ITEK K P + + + +
Sbjct: 258 QLFQKYKEKELHGPVFLHIITEKGKGYAPAENSNDKFHGVSSFDIQTGVQNKSKDKTYTS 317
Query: 193 ILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAE 235
++ M GTGL+ FQ+ +P R FDVGIAEQHAVTFA G+A E
Sbjct: 318 VISETLLKLAKKDKKVTAITAAMPSGTGLDKFQELYPDRFFDVGIAEQHAVTFAGGMATE 377
Query: 236 GLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACL 295
+KPF AIYS+FLQR +DQV HD+ +Q LPVRF IDR+G VGADG TH G+FD T++ CL
Sbjct: 378 SMKPFVAIYSTFLQRAYDQVVHDIAIQSLPVRFLIDRSGFVGADGATHAGSFDLTYLCCL 437
Query: 296 PNMVVM 301
PN +VM
Sbjct: 438 PNFIVM 443
>gi|77464715|ref|YP_354219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
2.4.1]
gi|119368196|sp|Q3IYR6.1|DXS2_RHOS4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
synthase 2; Short=DXPS 2
gi|77389133|gb|ABA80318.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
2.4.1]
Length = 637
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 197/368 (53%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISA VG A R++ G
Sbjct: 94 IRTLRQGGGLSGFTKRSESPYDCFGAGHSSTSISAA----------VGFAAAREMGGDTG 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
++VI +G+ A M++EA+N+ G L N+ + L+ N A SS + G
Sbjct: 144 DAVAVIGDGSMSAGMAFEALNHGGHLKNRVIVILNDNEMSIAPPVGALSSYLSRLYAGAP 203
Query: 113 MHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDLA 152
+ A ++ + G+R FE+LG Y+GP+DGH+L+ L
Sbjct: 204 FQDFKAAAKGALGLLPEPFQEGARRAKEMLKSVTVGGTLFEELGFSYVGPIDGHDLDQLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VL+ VK VLIHVIT+K + P + +
Sbjct: 264 PVLRTVKQRAH-APVLIHVITKKGRGYAPAEAARDRGHATNKFNVLTGAQVKPVSNAPSY 322
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D R M GTGLNLF + FP R FDVGIAEQHAVTF+A LA
Sbjct: 323 TKVFAQSLIKEAEVDERICAVTAAMPDGTGLNLFGERFPKRTFDVGIAEQHAVTFSAALA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A G++PFCAIYS+FLQR +DQ+ HDV +Q+LPVRFAIDRAGLVGADG TH G+FD F++
Sbjct: 383 AGGMRPFCAIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLS 442
Query: 294 CLPNMVVM 301
LP +VVM
Sbjct: 443 NLPGIVVM 450
>gi|332559608|ref|ZP_08413930.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
WS8N]
gi|332277320|gb|EGJ22635.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
WS8N]
Length = 637
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 197/368 (53%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISA VG A R++ G
Sbjct: 94 IRTLRQGGGLSGFTKRSESPYDCFGAGHSSTSISAA----------VGFAAAREMGGDTG 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
++VI +G+ A M++EA+N+ G L N+ + L+ N A SS + G
Sbjct: 144 DAVAVIGDGSMSAGMAFEALNHGGHLKNRVIVILNDNEMSIAPPVGALSSYLSRLYAGAP 203
Query: 113 MHEIDAFSR--------EIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDLA 152
+ A ++ + G+R FE+LG Y+GP+DGH+L+ L
Sbjct: 204 FQDFKAAAKGALGLLPEPFQEGARRAKEMLKSVTVGGTLFEELGFSYVGPIDGHDLDQLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VL+ VK VLIHVIT+K + P + +
Sbjct: 264 PVLRTVKQRAH-APVLIHVITKKGRGYAPAEAARDRGHATNKFNVLTGAQVKPVSNAPSY 322
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D R M GTGLNLF + FP R FDVGIAEQHAVTF+A LA
Sbjct: 323 TKVFAQSLIKEAEVDERICAVTAAMPDGTGLNLFGERFPKRTFDVGIAEQHAVTFSAALA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A G++PFCAIYS+FLQR +DQ+ HDV +Q+LPVRFAIDRAGLVGADG TH G+FD F++
Sbjct: 383 AGGMRPFCAIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLS 442
Query: 294 CLPNMVVM 301
LP +VVM
Sbjct: 443 NLPGIVVM 450
>gi|294084634|ref|YP_003551392.1| deoxyxylulose-5-phosphate synthase [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664207|gb|ADE39308.1| deoxyxylulose-5-phosphate synthase [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 640
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 152/369 (41%), Positives = 193/369 (52%), Gaps = 79/369 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+ T+RQ GL E+ D FG GHSSTSISAGL GMAV DL
Sbjct: 94 IETLRQRDGLSGFTKRDESEFDPFGAGHSSTSISAGL----------GMAVASDLQSTPR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
+VI+VI +GA A M+YEA+NNAG ++ + L+ N A SS +
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGASESRLIVILNDNDMSISQPVGAMSSYLSRLITSEP 203
Query: 113 MHEI--------DAFSREIEAGSRAC------------FFEDLGLYYIGPVDGHNLEDLA 152
H I F EIE +R F LG +IGP+DGH++ L
Sbjct: 204 FHSIRDLVREVTSKFPAEIERTARRAKDVARDLIGVNSVFSQLGFMHIGPLDGHDVNQLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
+LK ++ G VL+HV+TEK P K Q
Sbjct: 264 PILKNLRDTHTNGPVLLHVVTEKGHGH-PFKDQSHEKYHAVPKFDIITGTQQKSAGNVPN 322
Query: 187 -TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
T +F L D++ M GTGL+ + FP R FDVGIAEQHAVTFAAG+
Sbjct: 323 YTSVFANSLIKAAEADSKIVAITAAMPSGTGLDKLKAKFPSRVFDVGIAEQHAVTFAAGM 382
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
A+EG+KPFCA+YS+FLQR +DQ+ HDV LQ LPVRFAIDRAG+VGADG TH G +D ++
Sbjct: 383 ASEGMKPFCALYSTFLQRGYDQLIHDVCLQNLPVRFAIDRAGVVGADGATHAGIYDVAYL 442
Query: 293 ACLPNMVVM 301
+CLPNMV+M
Sbjct: 443 SCLPNMVIM 451
>gi|15606220|ref|NP_213598.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aquifex aeolicus VF5]
gi|8134411|sp|O67036.1|DXS_AQUAE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|2983421|gb|AAC07004.1| hypothetical protein aq_881 [Aquifex aeolicus VF5]
Length = 628
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 196/366 (53%), Gaps = 80/366 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG-KNNH 54
T+RQ G+ E+++DAFG GHSSTSISA L G +G+DL G K ++
Sbjct: 94 TLRQYKGISGFLRREESIYDAFGAGHSSTSISAAL----------GFRIGKDLKGEKEDY 143
Query: 55 VISVIVEGATIARMSYEAINNAG---------VLNKALKRLHSN-----PQFRQLCQEAF 100
VI+VI +GA A M+YEA+NNAG +LN + N ++ F
Sbjct: 144 VIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEMSISPNVGAISTYLNRIISGHF 203
Query: 101 SSKDKK------QKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ ++ Q FG I + E G S FE+LG YIGP+DGH+++ L
Sbjct: 204 VQETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISPGVIFEELGFNYIGPIDGHDIKALE 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKA-------------MLPLKLQQ------------T 187
L VK I P VL+HV T+K K + P K++ T
Sbjct: 264 DTLNNVKDIKGP--VLLHVYTKKGKGYKPAEENPVKWHGVAPYKVESGEIIKKSSPPTWT 321
Query: 188 RLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
+F K L D + M G+GL F K FP R FDVGIAEQHA TFAAGLAA
Sbjct: 322 SVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRFFDVGIAEQHACTFAAGLAA 381
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EGL+P A YS+FLQR +DQV HDV LQ LPV FAIDRAGLVG DGPTH G FD +++ C
Sbjct: 382 EGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGLVGDDGPTHHGVFDLSYLRC 441
Query: 295 LPNMVV 300
+PNMVV
Sbjct: 442 VPNMVV 447
>gi|134298942|ref|YP_001112438.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum reducens MI-1]
gi|134051642|gb|ABO49613.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum reducens
MI-1]
Length = 635
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 200/371 (53%), Gaps = 88/371 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ GL E++HDAF GHSSTSISA L GMA+ RDL G+ + V
Sbjct: 94 TLRQYGGLSGFPKPEESIHDAFATGHSSTSISAAL----------GMALTRDLKGEKHSV 143
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
++VI +G+ M++EA+N N G L+ L RL ++P++
Sbjct: 144 VAVIGDGSLTGGMAFEALNYAGHLKTNMIVVLNDNEMSIAPNVGALSGYLSRLRTDPKYS 203
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+ ++ + +K G ++ ++ D+ + G FE+LG Y+GPVDGH+
Sbjct: 204 K-GKDEIADLLQKIPHGPKLLKVVDRLKDSVKYLVVPG---MLFEELGFTYLGPVDGHDT 259
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP---------------------LKLQQT 187
+ + +L+Q KA+ P VL+HVIT+K K LP +K Q
Sbjct: 260 KAVLTMLQQAKAVSGP--VLVHVITKKGKGYLPAEQNPDRYHGVGPFDLETGTVVKSQGP 317
Query: 188 RLFCKIL----------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+ ++ D+R M GTGLN F K FP R FDVGIAEQHAVT AA
Sbjct: 318 PSYTEVFGETIVKLAKEDDRIIGITAAMPSGTGLNSFAKEFPKRYFDVGIAEQHAVTMAA 377
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+AA G +P AIYS+FLQR +DQV HDV +Q LPV FA+DR GLVG DGPTH G FD +
Sbjct: 378 GMAATGYRPIAAIYSTFLQRAYDQVLHDVCMQNLPVTFALDRGGLVGDDGPTHHGVFDIS 437
Query: 291 FMACLPNMVVM 301
F+ +PN+V+M
Sbjct: 438 FLRNIPNLVMM 448
>gi|163745284|ref|ZP_02152644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibulbus indolifex
HEL-45]
gi|161382102|gb|EDQ06511.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibulbus indolifex
HEL-45]
Length = 642
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 155/383 (40%), Positives = 196/383 (51%), Gaps = 104/383 (27%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG--- 50
+R++R GL E+ +D FG HSSTSISA L G AVGRDL G
Sbjct: 94 IRSLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVGRDLGGVIP 143
Query: 51 -KNNHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLH 87
I+VI +GA A M+YEA+NNAG L K L RL+
Sbjct: 144 EGLGDAIAVIGDGAMSAGMAYEALNNAGDLKKRLIVILNDNEMSIAPPVGAMSSYLSRLY 203
Query: 88 SNPQFR----------QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGL 137
+ F+ L E F K+ K D G+ FE+LG
Sbjct: 204 AEAPFQDFKAAAKGAVSLLPEPFREGAKRAK--------DMLKGMAVGGT---LFENLGF 252
Query: 138 YYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------- 186
Y+GP++GH+++ L VL+ V+ G +LIH+ T+K K P + +
Sbjct: 253 SYLGPINGHDMDQLLPVLRTVQQRAT-GPILIHIQTQKGKGYGPAEAARDRGHATAKFNV 311
Query: 187 ---------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDV 218
TR+F L D++ M GTGL+LF + +P RCFDV
Sbjct: 312 VTGEQKKSPSNAPSYTRVFADSLLTEAAEDDKICAVTAAMPDGTGLDLFAERYPSRCFDV 371
Query: 219 GIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGA 278
GIAEQH VTF AGLAA G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGA
Sbjct: 372 GIAEQHGVTFCAGLAAAGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGA 431
Query: 279 DGPTHCGAFDTTFMACLPNMVVM 301
DGPTH GAFD F+A LP VVM
Sbjct: 432 DGPTHAGAFDVAFLANLPGFVVM 454
>gi|71083316|ref|YP_266035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
ubique HTCC1062]
gi|118595598|sp|Q4FN07.1|DXS_PELUB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|71062429|gb|AAZ21432.1| 1-D-deoxyxylulose 5-phosphate synthase [Candidatus Pelagibacter
ubique HTCC1062]
Length = 637
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 151/378 (39%), Positives = 198/378 (52%), Gaps = 97/378 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
++T+RQ GL E+ +D FG HSSTSIS+ L GMA L K N
Sbjct: 91 IKTLRQGNGLSGFTKRSESEYDPFGAAHSSTSISSAL----------GMAEANKLSNKLN 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKA--------------LKRLHSNPQ 91
++I+VI +GA A M+YEA+NNAG +LN L +L +
Sbjct: 141 NIIAVIGDGAISAGMAYEAMNNAGASKTKMIVILNDNDMSIAKPVGAMRTYLAKLLTGKI 200
Query: 92 FRQLCQ------EAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDG 145
+ L + AFS ++F + + + F R G F LG YY+GP+DG
Sbjct: 201 YFSLRETFKLIVSAFS-----KRFSVKAGKAEDFLRSAVTG--GTLFNSLGFYYVGPIDG 253
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------------- 179
H+L L +LK + G ++IH+ T+K EKA
Sbjct: 254 HDLSTLIPILKNARDSKHQGPIMIHIKTQKGKGYSYAEKASDHYHGVSKFNVVTGEQVKS 313
Query: 180 ---LPLKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQ 223
LP T++F L D++ M GGTG+++F K FP R FDVGIAEQ
Sbjct: 314 GTNLP---AYTKVFANTLVKHAERDSKVVGVTAAMPGGTGMDIFAKDFPKRMFDVGIAEQ 370
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
HAVTFAAGLA EG KP+ AIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADG TH
Sbjct: 371 HAVTFAAGLATEGYKPYVAIYSTFLQRAYDQVVHDVAIQSLPVRFIIDRAGLVGADGSTH 430
Query: 284 CGAFDTTFMACLPNMVVM 301
G+FD T+++ LPN +VM
Sbjct: 431 AGSFDITYLSTLPNFIVM 448
>gi|126736182|ref|ZP_01751925.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. CCS2]
gi|126714348|gb|EBA11216.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. CCS2]
Length = 637
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 152/368 (41%), Positives = 191/368 (51%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISA L G AV RDL
Sbjct: 94 IRTLRTEGGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGAGGG 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
I++I +GA A M+YEA+NNAG L K L L+ N A SS + G
Sbjct: 144 DAIAIIGDGAMSAGMAYEAMNNAGHLGKRLIVILNDNEMSIAPPTGAMSSYLSRLYAGEP 203
Query: 113 MHEIDAFSREI---------EAGSRA-----------CFFEDLGLYYIGPVDGHNLEDLA 152
E A ++ E RA FE+LG Y+GP+DGH++E L
Sbjct: 204 FQEFKAAAKGAVSLLPEPFREGAKRAKDMLKHMTVGGTLFEELGFSYLGPIDGHDMEQLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VL+ VK D G +LIH IT+K K P +
Sbjct: 264 SVLRTVKDRAD-GPILIHAITKKGKGYAPAERASDKGHATAKFDVITGEQKKAPSNAPSY 322
Query: 187 TRLF----CKI---------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F CK+ + M GTGL F + + RCFDVGIAEQHAVTF+AGLA
Sbjct: 323 TSVFSESLCKLAADDPKICAVTAAMPDGTGLTKFMERYTSRCFDVGIAEQHAVTFSAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A G++PFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH G+FD +++
Sbjct: 383 AGGMRPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVGYLS 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 NLPGFVVM 450
>gi|339505498|ref|YP_004692918.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter litoralis Och
149]
gi|338759491|gb|AEI95955.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Roseobacter litoralis
Och 149]
Length = 642
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 157/383 (40%), Positives = 197/383 (51%), Gaps = 104/383 (27%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG--- 50
+RT+R GL E+ +D FG HSSTSISA L G AV RDL G
Sbjct: 94 IRTLRMKGGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGGVVP 143
Query: 51 -KNNHVISVIVEGATIARMSYEAINNAGVLNKA----------------------LKRLH 87
I+VI +G+ A M+YEA+NNAG L K L RL+
Sbjct: 144 EGLGDAIAVIGDGSMSAGMAYEAMNNAGHLKKRMIVILNDNEMSIAPPTGAMSSYLSRLY 203
Query: 88 SNPQFR----------QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGL 137
S F+ L E F K+ K D G+ FE+LG
Sbjct: 204 SGEPFQDFKAAAKGAVSLLPEPFREGAKRAK--------DMLKGMAVGGT---LFEELGF 252
Query: 138 YYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP---------------- 181
YIGP+DGH+L+ L +L+ VKA G ++IH +T+K K P
Sbjct: 253 SYIGPIDGHDLDQLLPLLRTVKARAT-GPIMIHALTKKGKGYAPAETARDKGHATAKFDV 311
Query: 182 LKLQQTR----------LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDV 218
L QQT+ +F + L D++ M GTGLNLF + +P RCFDV
Sbjct: 312 LTGQQTKAPSNAPSYTKVFAQSLLEEAMKDDKICAVTAAMPDGTGLNLFAERYPSRCFDV 371
Query: 219 GIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGA 278
GIAEQH VTF+A LAA G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGA
Sbjct: 372 GIAEQHGVTFSAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGA 431
Query: 279 DGPTHCGAFDTTFMACLPNMVVM 301
DG TH G+FD ++A LP VVM
Sbjct: 432 DGATHAGSFDIAYLANLPGFVVM 454
>gi|149914239|ref|ZP_01902770.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. AzwK-3b]
gi|149811758|gb|EDM71591.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. AzwK-3b]
Length = 642
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 188/371 (50%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G AVGRD+
Sbjct: 95 IRTLRQKDGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVGRDMGQATG 144
Query: 54 HVISVIVEGATIARMSYEAINNAG----------------------VLNKALKRLHSNPQ 91
I+VI +G+ A M+YEA+NNAG ++ L RL++N
Sbjct: 145 DAIAVIGDGSISAGMAYEAMNNAGHEGRRLFVILNDNEMSIAPPVGAMSSYLSRLYAN-- 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
L + A ++ + M E +R++ G FE+LG Y+GP+DGH+++
Sbjct: 203 -EPLARMASLAEGFEAAMPAPMREGAKRARQLVTGLTGSGTLFEELGFEYVGPIDGHDMD 261
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------------------- 186
L VL+ + G VLIH T K K P +
Sbjct: 262 QLLPVLRAARTRAT-GPVLIHCCTVKGKGYAPAETSSDKYHGVAKFDVATGTQTKSSGGT 320
Query: 187 ---TRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T +F + L M GTGL++ FP R FDVGIAEQHAVTFAA
Sbjct: 321 PSYTSIFGQSLTEEAARDPDIVAVTAAMPSGTGLDVMAARFPARVFDVGIAEQHAVTFAA 380
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+AA GLKPFCAIYS+FLQR +DQV HDV LQ LPVRFAIDRAGLVGADG TH GAFD
Sbjct: 381 GMAASGLKPFCAIYSTFLQRGYDQVVHDVALQGLPVRFAIDRAGLVGADGATHAGAFDIG 440
Query: 291 FMACLPNMVVM 301
+++ LP VM
Sbjct: 441 YLSSLPGFTVM 451
>gi|219114431|ref|XP_002176386.1| precursor of synthase DXS 1-deoxy-d-xylulose-5-phosphate synthase
[Phaeodactylum tricornutum CCAP 1055/1]
gi|217402632|gb|EEC42622.1| precursor of synthase DXS 1-deoxy-d-xylulose-5-phosphate synthase
[Phaeodactylum tricornutum CCAP 1055/1]
Length = 730
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 143/391 (36%), Positives = 201/391 (51%), Gaps = 111/391 (28%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGK-N 52
M T+RQ+ G+ E+ +D+FG GHSSTSIS GM++G+ +L K
Sbjct: 140 MSTLRQSGGISGFCKRKESEYDSFGAGHSSTSISVAQ----------GMSIGKSILNKRQ 189
Query: 53 NHVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQ-------------------- 91
N+ I+VI +GA M+YEA+N+AG L N+ + L+ N Q
Sbjct: 190 NNCIAVIGDGAITGGMAYEAMNSAGYLKNRMIVILNDNGQVSLPTGTPSAGGIVPASQLS 249
Query: 92 ---------------------FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRAC 130
F +L E +K+ ID ++R I AG
Sbjct: 250 TYTSNLLVSKPFQDFRMFAKNFNKLLPEGVQDVNKR---------IDEYARGIVAG--GT 298
Query: 131 FFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKE-------------- 176
FE+LG +Y+GPVDGH+L++L +L++++ P VL+HV T K
Sbjct: 299 LFEELGFFYVGPVDGHDLDNLIPILEKLRDSPSTKPVLLHVKTTKGYGYPPAEQASDRMH 358
Query: 177 -------------KAMLPLKLQQTRLFCKIL-----DNR--------MGGGTGLNLFQKH 210
K+ P+ T +F L ++R M GGTG+++F +
Sbjct: 359 GVAKFNLGTGKQIKSKKPIAPSLTSIFANALIDAATEDRSIVGITAAMPGGTGMDIFGRR 418
Query: 211 FPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAI 270
FP R FDVGIAEQHAVT AG+A EGLKPF IYS+F+QR +DQV HDV +Q LPVR +
Sbjct: 419 FPKRTFDVGIAEQHAVTMGAGMACEGLKPFVCIYSTFMQRGYDQVVHDVAIQNLPVRMVL 478
Query: 271 DRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DRAGLVG DGPTH G +D ++M C+PN+++M
Sbjct: 479 DRAGLVGNDGPTHHGCYDLSYMGCIPNLIIM 509
>gi|254476395|ref|ZP_05089781.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. R11]
gi|214030638|gb|EEB71473.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. R11]
Length = 642
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 156/383 (40%), Positives = 195/383 (50%), Gaps = 104/383 (27%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG--- 50
+RT+R GL E+ D FG HSSTSISA L G AV RDL G
Sbjct: 94 IRTLRMKDGLSGFTKRSESPFDPFGAAHSSTSISAAL----------GFAVARDLGGVIP 143
Query: 51 -KNNHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLH 87
N I+VI +G+ A M++EA+NNAG L K L RL+
Sbjct: 144 EGNGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLIVILNDNEMSIAPPVGALSSYLSRLY 203
Query: 88 SNPQFRQL----------CQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGL 137
+ F++L E F K+ K D G+ FE LG
Sbjct: 204 AEEPFQELKAVAKGAASLLPEPFREGAKRAK--------DMLKGMAVGGT---LFESLGF 252
Query: 138 YYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------- 186
Y+GP+DGH+++ L VL+ VKA G +LIHV+T+K K P + +
Sbjct: 253 SYLGPIDGHDMDQLLPVLRTVKARAT-GPILIHVLTKKGKGYAPAERARDKGHATAKFDM 311
Query: 187 ---------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDV 218
T +F K L D++ M GTGLNL + +P R FDV
Sbjct: 312 VTGEQKKAPSNAPSYTAVFGKELVRLAAEDDKICAVTAAMPDGTGLNLMAERYPSRTFDV 371
Query: 219 GIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGA 278
GIAEQH VTFAA LAA G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGA
Sbjct: 372 GIAEQHGVTFAAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGA 431
Query: 279 DGPTHCGAFDTTFMACLPNMVVM 301
DG TH G+FD +MA LP MVVM
Sbjct: 432 DGATHAGSFDIAYMANLPGMVVM 454
>gi|323529244|ref|YP_004231396.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1001]
gi|323386246|gb|ADX58336.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1001]
Length = 635
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 200/375 (53%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ L G N
Sbjct: 89 MSTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAAL----------GMAIASKLQGDNR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 MGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + M ++ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLRVAPPMLDL---ARKLEEHAKGMIVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + A+
Sbjct: 252 HDLDSLIPTLQNIKELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAV 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K FP R FDVGIAEQHAV
Sbjct: 310 SPSKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLAAEG+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM+VM
Sbjct: 430 YDLAFMRCIPNMMVM 444
>gi|407710084|ref|YP_006793948.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia
phenoliruptrix BR3459a]
gi|407238767|gb|AFT88965.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia
phenoliruptrix BR3459a]
Length = 635
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 200/375 (53%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ L G N
Sbjct: 89 MSTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAAL----------GMAIASKLQGDNR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 MGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + M ++ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLRVAPPMLDL---ARKLEEHAKGMIVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + A+
Sbjct: 252 HDLDSLIPTLQNIKELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAV 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K FP R FDVGIAEQHAV
Sbjct: 310 SPSKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLAAEG+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM+VM
Sbjct: 430 YDLAFMRCIPNMMVM 444
>gi|295695408|ref|YP_003588646.1| deoxyxylulose-5-phosphate synthase [Kyrpidia tusciae DSM 2912]
gi|295411010|gb|ADG05502.1| deoxyxylulose-5-phosphate synthase [Kyrpidia tusciae DSM 2912]
Length = 648
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/376 (39%), Positives = 196/376 (52%), Gaps = 95/376 (25%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ GL E+ HDAFG GH+STSISA L GMAV RDL G+++HV
Sbjct: 89 TLRQFGGLAGFPKRSESPHDAFGTGHASTSISAAL----------GMAVARDLKGESHHV 138
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQFR 93
++VI +GA M++EA+N+AG L K L +L ++ +
Sbjct: 139 VAVIGDGAMTGGMAFEALNHAGHLGKRLIVVLNDNEMSIAENVGAMADYLAKLRTDRTYA 198
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRAC--------FFEDLGLYYIGPVDG 145
++ E + GG++ +R +E + FE+LG Y GPVDG
Sbjct: 199 KMKNEVEHLLKRIPSIGGKV------ARTLERAKDSVKYFWVPGMLFEELGFTYFGPVDG 252
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAM-----LPLKLQQ-------------- 186
HN L +L++VK PDP VL+HV+T+K K P KL
Sbjct: 253 HNFTALTTMLERVKECPDP--VLLHVVTQKGKGYGRAERAPDKLHSVTPFNPETGKAEKS 310
Query: 187 --------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHA 225
T +F + D R M GGTGL F + FP R FDVGIAEQHA
Sbjct: 311 SSSSAPSYTDVFGNAIVELAERDPRIVAITAAMPGGTGLTKFARRFPDRFFDVGIAEQHA 370
Query: 226 VTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCG 285
T +AGLAA G++P A+YS+FLQR +DQV HD+ +Q LPV FA+DRAGLVGADG TH G
Sbjct: 371 ATLSAGLAAAGMRPVFAVYSTFLQRAYDQVIHDICIQNLPVVFAVDRAGLVGADGETHQG 430
Query: 286 AFDTTFMACLPNMVVM 301
AFD ++ +PNM +M
Sbjct: 431 AFDVAYLRTVPNMTIM 446
>gi|126730372|ref|ZP_01746183.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sagittula stellata E-37]
gi|126709105|gb|EBA08160.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sagittula stellata E-37]
Length = 649
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 153/372 (41%), Positives = 198/372 (53%), Gaps = 82/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGK-- 51
+RT+RQ GL E+ +D FG HSSTSISA L G AV RDL G
Sbjct: 102 IRTLRQKDGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFAVARDLGGACD 151
Query: 52 --NNHVISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQK 108
+ I+VI +GA A M++EA+NNAG L K L L+ N A SS +
Sbjct: 152 TGHGDAIAVIGDGAMSAGMAFEALNNAGHLKKRLIVILNDNEMSIAPPTGALSSYLTRLY 211
Query: 109 FGGQMHEIDAFSREI---------EAGSRA-----------CFFEDLGLYYIGPVDGHNL 148
H++ A ++ E RA FE+LG Y+GP+DGH+L
Sbjct: 212 AEAPFHDLKAAAKGAVSLLPEPFREGAKRAKEMLKGMAVGGTLFEELGFSYLGPIDGHDL 271
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEK-------------------------EKAMLPLK 183
+ L VL+ VKA G +LIH +T K E+ P
Sbjct: 272 DQLLPVLRTVKARAT-GPILIHALTRKGKGYSHAEHAADKGHARAKFDVVTGEQKKSPSN 330
Query: 184 LQQ-TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T++F + L D+R M GTGL+LF + +P RCFDVGIAEQH VTF+
Sbjct: 331 APSYTKVFAEALMQEAAEDSRICAVTAAMPDGTGLDLFAERYPSRCFDVGIAEQHGVTFS 390
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAA G++PFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH G++D
Sbjct: 391 AGLAAGGMRPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSYDV 450
Query: 290 TFMACLPNMVVM 301
+++ LP VVM
Sbjct: 451 AYLSNLPGFVVM 462
>gi|254512770|ref|ZP_05124836.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacteraceae bacterium
KLH11]
gi|221532769|gb|EEE35764.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacteraceae bacterium
KLH11]
Length = 643
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/374 (40%), Positives = 198/374 (52%), Gaps = 86/374 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKN- 52
+RT+R GL E+ +D FG HSSTSISA L G +V RDL G
Sbjct: 95 IRTLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFSVARDLGGVTP 144
Query: 53 ---NHVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQL 95
I+VI +G+ A M++EA+NNAG L K L + ++ + R
Sbjct: 145 EGLGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLIVILNDNEMSIAPPVGALSTYLSRIY 204
Query: 96 CQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR---------ACFFEDLGLYYIGPVDGH 146
+E F D K G + + RE ++ FE+LG Y+GP+DGH
Sbjct: 205 AEEPF--HDLKAAAKGAVSLLPEPFREGAKRAKEMLKGMAVGGTLFEELGFSYLGPIDGH 262
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------- 186
+L+ L VL+ VKA G +LIHV+T+K K P + +
Sbjct: 263 DLDQLLPVLRAVKAKAT-GPILIHVLTKKGKGYAPAEQARDKGHATARFDVVTGEQKKAP 321
Query: 187 ------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T +F K L D++ M GTGLNLF + +P RCFDV IAEQH VT
Sbjct: 322 SNAPSYTSVFGKALVEAAARDDKIVAVTAAMPDGTGLNLFAERYPSRCFDVAIAEQHGVT 381
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
F+A LAA G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH G+F
Sbjct: 382 FSAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSF 441
Query: 288 DTTFMACLPNMVVM 301
D ++A LP MVVM
Sbjct: 442 DIAYLANLPGMVVM 455
>gi|386817455|ref|ZP_10104673.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiothrix nivea DSM 5205]
gi|386422031|gb|EIJ35866.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiothrix nivea DSM 5205]
Length = 630
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 196/371 (52%), Gaps = 86/371 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +IRQ GL E+ +D FGVGHSSTSISA L GMA+ G++
Sbjct: 86 MDSIRQKDGLAGFPKRSESEYDTFGVGHSSTSISAAL----------GMALAAQQKGEDY 135
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
H I++I +GA A M+YEA+N N G L K L RL S
Sbjct: 136 HSIAIIGDGAMTAGMAYEALNHAGDLDANLIVVLNDNEMSISPNVGALRKYLTRLLSGRM 195
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS--RACFFEDLGLYYIGPVDGHNLE 149
+ + + S K + ++ + E G FE++G Y GP+DGH++E
Sbjct: 196 YSSMRE----SGKKALSHSKSLSKLVKLTEEHMKGMVLPGTLFEEMGFKYYGPIDGHDVE 251
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKA-------------MLPLKLQQ---------- 186
+L +VL+ +K I P L+H++T+K K + P L+
Sbjct: 252 ELVHVLENLKQIKGP--RLLHILTQKGKGYEPAEEDPCAYHGVTPFNLKTGLVSSSKKST 309
Query: 187 ---TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T++F + L D R+ G G+GL F + FP R FDVGIAEQHAVT AA
Sbjct: 310 PTYTQVFGQWLCDMAAQDKRLVGITPAMREGSGLVAFSEQFPQRYFDVGIAEQHAVTLAA 369
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA EGLKP AIYS+FLQR +DQ+ HDV +Q LPV FA+DRAGLVGADGPTH G +D +
Sbjct: 370 GLACEGLKPVVAIYSTFLQRAYDQLLHDVAIQNLPVVFAVDRAGLVGADGPTHSGNYDLS 429
Query: 291 FMACLPNMVVM 301
F+ C+PNMVVM
Sbjct: 430 FLRCVPNMVVM 440
>gi|20807747|ref|NP_622918.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|22095585|sp|Q8RAC5.1|DXS_THETN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|20516301|gb|AAM24522.1| Deoxyxylulose-5-phosphate synthase [Thermoanaerobacter
tengcongensis MB4]
Length = 622
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 198/370 (53%), Gaps = 86/370 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ GL E++HD FG GHSSTS+SA L G+A RDL G+ HV
Sbjct: 88 TLRQFNGLSGYTKRTESIHDIFGAGHSSTSLSAAL----------GIATARDLKGEKYHV 137
Query: 56 ISVIVEGATIARMSYEAINN----------------------AGVLNKALKRLHSNPQFR 93
I+VI +GA M+ EA+NN G L+ L +L ++P +
Sbjct: 138 IAVIGDGALTGGMALEALNNIGRSRKDVIVILNHNEMSISENVGSLSLYLSKLRTDPTYN 197
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
++ QE + + G +H+ D+ + + G FFE+LG Y+GP+DGHN+
Sbjct: 198 KVKQEIDNLLNIIPPIGKSLHKYIEKIKDSIKQLVVPG---MFFEELGFTYLGPIDGHNV 254
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAML-------------PLKLQQTR------- 188
E+L VL++ K + P +LIHV+T+K K + P ++ +
Sbjct: 255 EELIEVLERSKKMKGP--LLIHVVTKKGKGYMFAEKRPDKFHSAAPFDIETGKFVGEGKD 312
Query: 189 ----LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F K L D + M GTGL F K P R FDVGIAEQHA TFAAG
Sbjct: 313 SYSDVFGKTLAEMALKDEKIVAITAAMPEGTGLIHFAKLIPDRFFDVGIAEQHATTFAAG 372
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KP+ A+YS+FLQR +DQV HDV +QKLPV FA+DRAG+VG DG TH G FD +F
Sbjct: 373 LAVEGYKPYFAVYSTFLQRAYDQVIHDVCIQKLPVVFAVDRAGIVGEDGETHQGVFDISF 432
Query: 292 MACLPNMVVM 301
+ +PN+ +M
Sbjct: 433 LRAIPNIAIM 442
>gi|61653206|gb|AAX48160.1| deoxyxylulose-5-phosphate synthase [uncultured proteobacterium
DelRiverFos13D03]
Length = 631
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 154/373 (41%), Positives = 186/373 (49%), Gaps = 88/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+V+D FG HSSTSISA L G +GRD+
Sbjct: 88 MHSLRQEGGVSGFTKRSESVYDPFGAAHSSTSISAAL----------GFTLGRDMGQPTG 137
Query: 54 HVISVIVEGATIARMSYEAINNAG----------------------VLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+N AG LN+ L L +
Sbjct: 138 DAIAVIGDGAITAGMAYEAMNAAGHLGKRMFVILNDNDMSIAPPVGALNRYLNGLSRHKP 197
Query: 92 FRQL--CQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHN 147
F L E F + G + E +R+I G S A FE LG YIGPVDGH+
Sbjct: 198 FDLLRDMAEGFEAA-----LPGPLREGARRARQIVTGMPSGATLFEQLGFSYIGPVDGHS 252
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------------- 186
+ DL L+ K G VLIH +T K K P +
Sbjct: 253 MPDLLATLRAAKTRAT-GPVLIHAVTVKGKGYAPAENSADKYHGVAKFDVVSGTQAKAKS 311
Query: 187 -----TRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T +F + L M GTGL++ + FP R FDVGIAEQHAVTF
Sbjct: 312 NAPAYTSVFGRCLTEAAARDGKIVAVTAAMPTGTGLDIMAERFPARVFDVGIAEQHAVTF 371
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAG+AA GLKPF AIYS+FLQR +DQ+ HDV LQ LPVRFAIDRAGLVGADG TH GAFD
Sbjct: 372 AAGMAASGLKPFVAIYSTFLQRGYDQIVHDVALQGLPVRFAIDRAGLVGADGATHAGAFD 431
Query: 289 TTFMACLPNMVVM 301
F+A LP VVM
Sbjct: 432 VGFLANLPGFVVM 444
>gi|254478700|ref|ZP_05092071.1| 1-deoxy-D-xylulose-5-phosphate synthase [Carboxydibrachium
pacificum DSM 12653]
gi|214035387|gb|EEB76090.1| 1-deoxy-D-xylulose-5-phosphate synthase [Carboxydibrachium
pacificum DSM 12653]
Length = 622
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 198/370 (53%), Gaps = 86/370 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ GL E++HD FG GHSSTS+SA L G+A RDL G+ HV
Sbjct: 88 TLRQFNGLSGYTKRTESIHDIFGAGHSSTSLSAAL----------GIATARDLKGEKYHV 137
Query: 56 ISVIVEGATIARMSYEAINN----------------------AGVLNKALKRLHSNPQFR 93
I+VI +GA M+ EA+NN G L+ L +L ++P +
Sbjct: 138 IAVIGDGALTGGMALEALNNIGRSQKDVIVILNHNEMSISENVGSLSLYLSKLRTDPTYN 197
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
++ QE + + G +H+ D+ + + G FFE+LG Y+GP+DGHN+
Sbjct: 198 KVKQEIDNLLNIIPPIGKSLHKYIEKIKDSIKQLVVPG---MFFEELGFTYLGPIDGHNV 254
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAML-------------PLKLQQTR------- 188
E+L VL++ K + P +LIHV+T+K K + P ++ +
Sbjct: 255 EELIEVLERSKKMKGP--LLIHVVTKKGKGYMFAEKRPDKFHSAAPFDIETGKFVGEGKD 312
Query: 189 ----LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F K L D + M GTGL F K P R FDVGIAEQHA TFAAG
Sbjct: 313 SYSDVFGKTLAEMALKDEKIVAITAAMPEGTGLIHFAKLIPDRFFDVGIAEQHATTFAAG 372
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KP+ A+YS+FLQR +DQV HDV +QKLPV FA+DRAG+VG DG TH G FD +F
Sbjct: 373 LAVEGYKPYFAVYSTFLQRAYDQVIHDVCIQKLPVVFAVDRAGIVGEDGETHQGVFDISF 432
Query: 292 MACLPNMVVM 301
+ +PN+ +M
Sbjct: 433 LRAIPNIAIM 442
>gi|397691300|ref|YP_006528554.1| 1-deoxy-D-xylulose-5-phosphate synthase [Melioribacter roseus P3M]
gi|395812792|gb|AFN75541.1| 1-deoxy-D-xylulose-5-phosphate synthase [Melioribacter roseus P3M]
Length = 639
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 193/374 (51%), Gaps = 88/374 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
++TIRQ G+ E+ +D+FG GH+STSISA L GMAV D+L +N
Sbjct: 94 LKTIRQFKGISGFLKRSESPYDSFGAGHASTSISAAL----------GMAVASDILKENR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
V++VI +GA M+YEA+NN+G+L K L + S+P+
Sbjct: 144 KVVAVIGDGAMTGGMAYEAMNNSGLLKKNLIVVLNDNQMSIAPNVWQISKYFNEMISHPE 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRAC-----FFEDLGLYYIGPVDGH 146
+ + + K FG ++ ++ A IE G +A FE LG Y GP++GH
Sbjct: 204 YNRFKGAIWDLTGKLDYFGDRLRKVAA---RIEQGIKAILTPGMLFEALGFRYFGPINGH 260
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL----------------- 189
N+ L + + VK + P +L+HV+TEK K P + RL
Sbjct: 261 NITQLVRLFEHVKDLNGP--ILVHVLTEKGKGYKPAENHSQRLHAATPFDKLTGVSLKKG 318
Query: 190 -----FCKILDN-----------------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
+ + N M GTGL+ Q P R +DVGIAE+HAVT
Sbjct: 319 TSLPSYTSVFGNALVEIAKSNDKVVGITAAMPDGTGLDKLQAEIPERYYDVGIAEEHAVT 378
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA G+ P AIYS+FLQR FDQ+ HDV LQ L V FA+DRAGLVGADGPTH G F
Sbjct: 379 FAAGLATRGIIPVVAIYSTFLQRAFDQIIHDVALQDLHVVFALDRAGLVGADGPTHHGTF 438
Query: 288 DTTFMACLPNMVVM 301
D +++ +PN+V+M
Sbjct: 439 DLSYLRMIPNIVIM 452
>gi|167566510|ref|ZP_02359426.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia oklahomensis
EO147]
gi|167573591|ref|ZP_02366465.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia oklahomensis
C6786]
Length = 634
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 148/375 (39%), Positives = 199/375 (53%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MKTLRQLDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSKLKGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ M E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPMLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIKELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K FP R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D +F+ C+PNM VM
Sbjct: 430 YDLSFLRCIPNMTVM 444
>gi|254293554|ref|YP_003059577.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hirschia baltica ATCC
49814]
gi|254042085|gb|ACT58880.1| deoxyxylulose-5-phosphate synthase [Hirschia baltica ATCC 49814]
Length = 642
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/368 (39%), Positives = 199/368 (54%), Gaps = 80/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG H+ TSISAG G A RDL ++
Sbjct: 92 IRTLRQGGGLSGFTKRSESEYDPFGAAHAGTSISAG----------AGFATARDLKDEDR 141
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQ---EAFSSKD 104
+V+ VI +G+ A M+YEA+N+ G ++K + + P L + SSK
Sbjct: 142 NVVCVIGDGSMTAGMAYEAMNHMGGMHKRMIVILNDNDMSIAPPVGALSHYLSKTVSSKG 201
Query: 105 KKQ-KFGGQM-----------HEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLA 152
+Q + G+M + + ++R+ G F+ LG YY+GP+DGH+L+ L
Sbjct: 202 YRQFRKAGKMMAKTVGLEKPAKKAEHYARDFALG--GAMFDALGFYYVGPIDGHDLDTLI 259
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VL+ V+ + + G VL+HV+TEK K P +
Sbjct: 260 PVLENVRDMKN-GPVLVHVVTEKGKGFEPAEKSADKYHGVSKFNVITGEQAKSKPNAPSY 318
Query: 187 TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + L D R+ G GTG++ F FP R FDVGIAEQH VTFAA +A
Sbjct: 319 TNVFAQELIRLAKDDERIVGITAAMPSGTGMDKFGDAFPERMFDVGIAEQHGVTFAAAMA 378
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A+G+KPFCAIYS+FLQR +D V HDV +QKLPVRFAIDRAGLVGADG TH G+FD ++
Sbjct: 379 ADGMKPFCAIYSTFLQRAYDSVVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDIGYLG 438
Query: 294 CLPNMVVM 301
LP+ V+M
Sbjct: 439 ALPDFVLM 446
>gi|323702780|ref|ZP_08114440.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum nigrificans
DSM 574]
gi|323532297|gb|EGB22176.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum nigrificans
DSM 574]
Length = 639
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 146/369 (39%), Positives = 189/369 (51%), Gaps = 83/369 (22%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ GL E++HDAF GHSSTSISA L GM + RDL G+ V
Sbjct: 91 TLRQYGGLSGFPKRDESIHDAFDTGHSSTSISAAL----------GMVLARDLKGEKYSV 140
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFSSKDKKQKF 109
++VI +G+ M++EA+N+AG L K L + P L SS K+
Sbjct: 141 VAVIGDGSMTGGMAFEALNHAGHLKKNLIVILNDNEMSIAPNVGALSS-YLSSLRTDPKY 199
Query: 110 GGQMHEIDAFSREIEAGSR------------------ACFFEDLGLYYIGPVDGHNLEDL 151
EI ++I G + FE+LG Y+GPVDGH+++ +
Sbjct: 200 SRSKDEIAELLQKIPHGPKLLKVVDRLKDSLKYLVVPGMLFEELGFTYLGPVDGHDIKAV 259
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------- 186
+LKQ K + P VL+HV+T+K K P +
Sbjct: 260 TTMLKQAKNLGGP--VLVHVLTKKGKGYEPAEKNPDLFHGVGPFDVVTGAIKKIPGAPPS 317
Query: 187 -TRLFCKILDN-------------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
T++F + + N M GTGLN F + FP R FDVGIAEQHAVT AAGL
Sbjct: 318 YTQIFGQTMINLAKQDDKIIGITAAMPSGTGLNKFAQEFPNRYFDVGIAEQHAVTMAAGL 377
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
AA G +P AIYS+FLQR +DQV HDV LQ LPV FA+DRAGLVG DGPTH G FD ++
Sbjct: 378 AAGGYRPVVAIYSTFLQRAYDQVLHDVCLQNLPVTFALDRAGLVGDDGPTHHGVFDLAYL 437
Query: 293 ACLPNMVVM 301
+PNMV+M
Sbjct: 438 RSIPNMVIM 446
>gi|50952770|gb|AAT90303.1| putative deoxyxylulose-5-phosphate synthase [uncultured
proteobacterium eBACred25D05]
Length = 647
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 190/368 (51%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +RQ G+ E+ +D FG HSSTSISA L G +GR+L
Sbjct: 94 MMGLRQKDGVSGFTKRSESEYDPFGAAHSSTSISAAL----------GFTMGRELGQTVG 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL-KRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
I+VI +G+ A M+YEA+NNAG NK L L+ N A SS
Sbjct: 144 DCIAVIGDGSISAGMAYEAMNNAGAENKRLFVILNDNEMSIAPPVGAMSSYLSGLYGNSA 203
Query: 113 MHEIDAFSREIEA--------GSR------------ACFFEDLGLYYIGPVDGHNLEDLA 152
H++ + E+E G+R A FE+LG Y+GP+DGHN+ L
Sbjct: 204 FHKLKTLAEEVEVHLPWAMRDGARRARQIVTGMHGQATLFEELGFDYLGPIDGHNMPQLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-----------------LQQ--------- 186
VL+ KA G VLIHV T+K P + LQ
Sbjct: 264 SVLRAAKARAT-GPVLIHVCTKKGCGYAPAENSSDKYHGVSKFDIATGLQSKTPANAPSY 322
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + L D R M GTG+N K FP R FDVGIAEQH VTFAAG+A
Sbjct: 323 TSIFGQALTIEAEADPRIVAVTAAMPSGTGVNAMAKVFPKRVFDVGIAEQHGVTFAAGMA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A GLKPFCAIYS+FLQR +DQ+ HDV LQ LPVRFAIDRAGLVGADG TH GAFD +++
Sbjct: 383 ASGLKPFCAIYSTFLQRGYDQIVHDVALQNLPVRFAIDRAGLVGADGATHAGAFDVAYLS 442
Query: 294 CLPNMVVM 301
LPN VVM
Sbjct: 443 NLPNFVVM 450
>gi|357037657|ref|ZP_09099457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum gibsoniae
DSM 7213]
gi|355361822|gb|EHG09577.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum gibsoniae
DSM 7213]
Length = 662
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 191/371 (51%), Gaps = 87/371 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+ HDAFG GH+STSISAG +GMA+ RDL G++ V
Sbjct: 123 TLRQFGGISGFPRPQESEHDAFGTGHASTSISAG----------IGMAIARDLDGEDYTV 172
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQFR 93
+ +I +GA M++EA+N+AG L K L RL ++P +
Sbjct: 173 VPIIGDGAMTGGMAFEALNHAGHLKKNLIIVLNDNEMSISPNIGGLACYFNRLRTDPMYY 232
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+ E K G + ++ D+ + G FE+LG Y+GPVDGH+L
Sbjct: 233 RSRDEIEQLLRKIPPIGNTILKVMDRLKDSLKYLVVPG---MLFEELGFIYLGPVDGHDL 289
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK------------------------- 183
+ L Y LKQ K++ P VL+HVIT K K P +
Sbjct: 290 KSLIYTLKQAKSVKGP--VLVHVITRKGKGYRPAEEDADKFHGITSFNVSDGKTTPSNNI 347
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T + K L +N+ M GTGL F +P R FDVGIAEQHAVT AA
Sbjct: 348 LTYTEVLGKTLLEEAAKNNKIVAITAAMSSGTGLKEFSVQYPDRFFDVGIAEQHAVTMAA 407
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A G KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVG DGPTH G FD
Sbjct: 408 GMARRGYKPVVAIYSTFLQRAYDQILHDVCLQNLPVVFAIDRAGLVGDDGPTHHGLFDYA 467
Query: 291 FMACLPNMVVM 301
++ +PNM +M
Sbjct: 468 YLRPIPNMTIM 478
>gi|400756076|ref|YP_006564444.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phaeobacter gallaeciensis
2.10]
gi|398655229|gb|AFO89199.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Phaeobacter
gallaeciensis 2.10]
Length = 642
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 155/383 (40%), Positives = 195/383 (50%), Gaps = 104/383 (27%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG--- 50
+RT+R GL E+ D FG HSSTSISA L G AV RDL G
Sbjct: 94 IRTLRMKDGLSGFTKRSESPFDPFGAAHSSTSISAAL----------GFAVARDLGGVVP 143
Query: 51 -KNNHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLH 87
I+VI +G+ A M++EA+NNAG L K L RL+
Sbjct: 144 EGLGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLIVILNDNEMSIAPPVGALSSYLSRLY 203
Query: 88 SNPQFRQL----------CQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGL 137
+ F++L E F K+ K D G+ FE LG
Sbjct: 204 AEEPFQELKAVAKGAASLLPEPFREGAKRAK--------DMLKGMAVGGT---LFESLGF 252
Query: 138 YYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------- 186
Y+GP+DGH+++ L VL+ VKA G +LIHV+T+K K P + +
Sbjct: 253 SYLGPIDGHDMDQLLPVLRTVKARAT-GPILIHVLTKKGKGYAPAERARDKGHATAKFDM 311
Query: 187 ---------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDV 218
T +F K L D++ M GTGL+L + +P RCFDV
Sbjct: 312 VTGEQKKAPSNAPSYTSVFGKELVRLAAEDDKICAVTAAMPDGTGLSLMAERYPSRCFDV 371
Query: 219 GIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGA 278
GIAEQH VTFAA LAA G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGA
Sbjct: 372 GIAEQHGVTFAAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGA 431
Query: 279 DGPTHCGAFDTTFMACLPNMVVM 301
DG TH G+FD +MA LP MVVM
Sbjct: 432 DGATHAGSFDIAYMANLPGMVVM 454
>gi|325294213|ref|YP_004280727.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064661|gb|ADY72668.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 619
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 196/363 (53%), Gaps = 79/363 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+ +D FGVGHSSTSISA L G+ VG+ L G+ HV
Sbjct: 89 TLRQYGGISGFPSIKESPYDVFGVGHSSTSISAAL----------GIRVGKKLKGEEGHV 138
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQ-------------FRQLCQEAFSS 102
I+VI +GA A +YE +NNAG L + L + ++ + ++ F
Sbjct: 139 IAVIGDGALTAGEAYEGLNNAGQLGEDLIVILNDNEMSISKNIGAISNYLTKVTTGEFLR 198
Query: 103 KDK-------KQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGHNLED 150
K K K+ FG ++++ R + + F FE+LG Y+GP+DGH+L+
Sbjct: 199 KAKHRLEEVTKKIFGEKVYK--GLKRVEDLIVKGLFPPGMLFEELGFRYVGPIDGHDLDT 256
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR--------------------LF 190
L L+ V + P L+HVIT+K K P + + R +F
Sbjct: 257 LIVTLENVSKMSGP--TLVHVITKKGKGYEPAEEKPERFHGISPKKTNSDSKQPTYTEVF 314
Query: 191 CKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGL 237
K L M GTGL+ F++ FP R +DVGIAEQHAVTFAAG+A +GL
Sbjct: 315 SKTLIEIGKKYKDIVAITAAMPSGTGLDKFKEVFPERYYDVGIAEQHAVTFAAGMAKKGL 374
Query: 238 KPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPN 297
KP AIYS+FLQR FDQ+ HDV LQ+LPV FAIDRAGLVG DG TH GAFD +++ +PN
Sbjct: 375 KPVVAIYSTFLQRAFDQIVHDVALQELPVVFAIDRAGLVGEDGATHHGAFDLSYLRIIPN 434
Query: 298 MVV 300
MVV
Sbjct: 435 MVV 437
>gi|255261415|ref|ZP_05340757.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassiobium sp. R2A62]
gi|255103750|gb|EET46424.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassiobium sp. R2A62]
Length = 619
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 144/360 (40%), Positives = 189/360 (52%), Gaps = 72/360 (20%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T+RQ G+ E+ D FG HSSTSISA L G V RD+
Sbjct: 89 MKTLRQEGGISGFTKRTESDFDPFGAAHSSTSISAAL----------GFTVARDMGQPTG 138
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFSSKDKKQ 107
+++I +G+ A M+YEA+NNAG + + + P + Q + S+
Sbjct: 139 DAVAIIGDGSISAGMAYEAMNNAGAEGRRMFVILNDNEMSIAPPVGAMSQ--YMSRLADT 196
Query: 108 KFG----GQMHEIDAFSREIEAG---SRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKA 160
G G + + +RE+ G S FE+LG Y+GP++GH+++ L VL+ V+
Sbjct: 197 PLGAALPGPLRDHARRARELVTGRTTSSGTMFEELGFEYVGPINGHDMDQLLAVLRSVRT 256
Query: 161 IPDPGAVLIHVITEKEKAMLPLK--------------------------LQQTRLFCKIL 194
G VLIH T K K P + T +F L
Sbjct: 257 RAT-GPVLIHCCTVKGKGYAPAENSADKYHGVSKFDVSSGAQAKSGSNAPSYTSVFGHAL 315
Query: 195 ------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFC 241
D+++ G GTG+++F FP R FDVGIAEQH VTFAAGLAA GLKPFC
Sbjct: 316 TRIAARDSKIVGITAAMPSGTGMDIFADAFPRRVFDVGIAEQHGVTFAAGLAAGGLKPFC 375
Query: 242 AIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
AIYS+FLQR +DQ+ HDV LQ LPVRFAIDRAGLVGADG TH GAFD +++ LPNM VM
Sbjct: 376 AIYSTFLQRGYDQIVHDVALQNLPVRFAIDRAGLVGADGATHAGAFDVGYLSALPNMTVM 435
>gi|333924274|ref|YP_004497854.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333749835|gb|AEF94942.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 639
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 146/369 (39%), Positives = 189/369 (51%), Gaps = 83/369 (22%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ GL E++HDAF GHSSTSISA L GM + RDL G+ V
Sbjct: 91 TLRQYGGLSGFPKRDESIHDAFDTGHSSTSISAAL----------GMVLARDLKGEKYSV 140
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFSSKDKKQKF 109
++VI +G+ M++EA+N+AG L K L + P L SS K+
Sbjct: 141 VAVIGDGSMTGGMAFEALNHAGHLKKNLIVILNDNEMSIAPNVGALSS-YLSSLRTDPKY 199
Query: 110 GGQMHEIDAFSREIEAGSR------------------ACFFEDLGLYYIGPVDGHNLEDL 151
EI ++I G + FE+LG Y+GPVDGH+++ +
Sbjct: 200 SRSKDEIAELLQKIPHGPKLLKVVDRLKDSLKYLVVPGMLFEELGFTYLGPVDGHDIKAV 259
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------- 186
+LKQ K + P VL+HV+T+K K P +
Sbjct: 260 TTMLKQAKNLGGP--VLVHVLTKKGKGYEPAEKNPDLFHGVGPFDVVTGAIKKIPGAPPS 317
Query: 187 -TRLFCKILDN-------------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
T++F + + N M GTGLN F + FP R FDVGIAEQHAVT AAGL
Sbjct: 318 YTQIFGQTMINLAKQDDKIIGITAAMPSGTGLNKFAQEFPNRYFDVGIAEQHAVTMAAGL 377
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
AA G +P AIYS+FLQR +DQV HDV LQ LPV FA+DRAGLVG DGPTH G FD ++
Sbjct: 378 AAGGYRPVVAIYSTFLQRAYDQVLHDVCLQNLPVTFALDRAGLVGDDGPTHHGVFDLAYL 437
Query: 293 ACLPNMVVM 301
+PNMV+M
Sbjct: 438 RNIPNMVIM 446
>gi|298715557|emb|CBJ28110.1| 1-deoxy-D-xylulose 5-phosphate synthase, chloroplast precursor
[Ectocarpus siliculosus]
Length = 795
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 143/381 (37%), Positives = 202/381 (53%), Gaps = 92/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKN- 52
M ++RQ+ GL E+ D FG GHSSTSIS+ + GM+VG+ L K
Sbjct: 177 MHSLRQSGGLSGFAKRSESEFDCFGAGHSSTSISSAM----------GMSVGKSQLSKRR 226
Query: 53 NHVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQF------------------- 92
N+ ++VI +GA M++EA+N AG L + + L+ N Q
Sbjct: 227 NNCVAVIGDGAITGGMAFEAMNCAGYLGVRHMVILNDNGQVSLPTGTHSAGGVVPAGALS 286
Query: 93 ----RQLCQEAFSS-KDKKQKFGGQMH--------EIDAFSREIEAGSRACFFEDLGLYY 139
R + +F S +D + F + +ID ++R + +G FE+LG YY
Sbjct: 287 SYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKIDEYARGMMSG--GTLFEELGYYY 344
Query: 140 IGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------- 186
+GPVDGH+L +L +L+ ++ D VL+H+ TEK P
Sbjct: 345 VGPVDGHDLANLVPILENIRDKKDDKPVLLHIRTEKGMGYPPAMAASDKYHGVAKFNVAT 404
Query: 187 -------------TRLFCKIL-----DNR--------MGGGTGLNLFQKHFPIRCFDVGI 220
T +F L ++R M GGTG+++F + FP R +DVGI
Sbjct: 405 GKQHKGTSANPSLTSVFANTLIDIATEDRSVVGITAAMPGGTGMDMFGRRFPKRTYDVGI 464
Query: 221 AEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADG 280
AEQHAVTFAAG+A EGLKPFC +YS+F+QR +DQV HDV +QKLPVR +DRAGLVG DG
Sbjct: 465 AEQHAVTFAAGMAVEGLKPFCCVYSTFMQRAYDQVMHDVVVQKLPVRMILDRAGLVGNDG 524
Query: 281 PTHCGAFDTTFMACLPNMVVM 301
PTH G+FD T++ LP++V+M
Sbjct: 525 PTHHGSFDLTYLGTLPHIVIM 545
>gi|187921414|ref|YP_001890446.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia phytofirmans
PsJN]
gi|187719852|gb|ACD21075.1| deoxyxylulose-5-phosphate synthase [Burkholderia phytofirmans PsJN]
Length = 653
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 149/375 (39%), Positives = 197/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ L G N
Sbjct: 107 MHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAAL----------GMAIASKLQGDNR 156
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 157 TGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISPPVGALNRHLARLMSG- 215
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + M ++ +R++E ++ A FE+ G YIGP+DG
Sbjct: 216 ---RFYAAARAGVERVLRVAPPMLDL---ARKLEEHAKGMIVPATLFEEFGFNYIGPIDG 269
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + A
Sbjct: 270 HDLDSLIPTLQNIKELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAT 327
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K FP R FDVGIAEQHAV
Sbjct: 328 TPSKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAV 387
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLAAEG+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 388 TFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 447
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 448 YDLAFLRCIPNMTVM 462
>gi|78045077|ref|YP_360804.1| 1-deoxy-D-xylulose-5-phosphate synthase [Carboxydothermus
hydrogenoformans Z-2901]
gi|118595500|sp|Q3AAN0.1|DXS_CARHZ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|77997192|gb|ABB16091.1| 1-deoxy-D-xylulose-5-phosphate synthase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 622
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 195/371 (52%), Gaps = 86/371 (23%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
+T+R GL E+ +DAFGVGHSSTSISA L GMA+ RDL G+
Sbjct: 90 KTLRTFGGLSGFPKRDESPYDAFGVGHSSTSISAAL----------GMALARDLKGEQYE 139
Query: 55 VISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQF 92
V++VI +GA M++EA+N+AG L K L R+ ++P++
Sbjct: 140 VVAVIGDGALTGGMAFEALNHAGHLQKKLIVVVNDNEMSIAQNVGALSAYLSRIRTDPKY 199
Query: 93 RQLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
+ E + K G M +I D+F + G FE+LG Y+GP+DGHN
Sbjct: 200 SRGKDELEALIKKIPHIGPTMVKIGERLKDSFKYLLVPG---MLFEELGFTYLGPIDGHN 256
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEK-------------------------EKAMLP- 181
++++ V + K P V++HVIT+K E P
Sbjct: 257 IKEMIEVFSRAKTFAGP--VVVHVITKKGKGYHWAEENPDGFHGVGKFYISTGEPVEAPR 314
Query: 182 -----------LKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
++L Q R + M GTGLN F +++P R +DVGIAEQHAVT AA
Sbjct: 315 VSFTEVFGKALVELAQDRPEVVAITAAMPTGTGLNYFAQNYPERFYDVGIAEQHAVTMAA 374
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EGLKP AIYS+FLQR FDQ+ HDV LQ LPV FA+DRAG+VG DGPTH G FD +
Sbjct: 375 GMACEGLKPVVAIYSTFLQRSFDQIIHDVCLQNLPVVFAVDRAGIVGEDGPTHHGIFDLS 434
Query: 291 FMACLPNMVVM 301
++ +PN+ +M
Sbjct: 435 YLRMIPNLTIM 445
>gi|149202070|ref|ZP_01879043.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. TM1035]
gi|149144168|gb|EDM32199.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. TM1035]
Length = 661
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 190/371 (51%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+++D FG HSSTSISA L G AVGRD+
Sbjct: 114 IRTLRQKDGLSGFTKRSESIYDPFGAAHSSTSISAAL----------GFAVGRDMGQATG 163
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
I+VI +G+ A M+YEA+NNAG ++ L R++++
Sbjct: 164 DAIAVIGDGSISAGMAYEALNNAGAEGRRLFVILNDNEMSIAPPVGAMSSYLSRMYAS-- 221
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
L + A ++ + + E +R++ G FE+LG Y+GP+DGH++
Sbjct: 222 -EPLARMASLAEGFEAALPTPLRESAKRARQLVTGLTGSGTLFEELGFQYVGPIDGHDMG 280
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VL+ + G VLIHV T K K P +
Sbjct: 281 QLLSVLRAARTRAT-GPVLIHVCTVKGKGYAPAEGAADKGHGVSKFDPATGAQAKSKPGA 339
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T +F + L D+R M GTGL + FP R FDVGIAEQHAVTFAA
Sbjct: 340 PSYTGVFGQALVDEAARDDRIVAVTAAMPDGTGLTKMAERFPARVFDVGIAEQHAVTFAA 399
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+AA GLKPFC IYS+FLQR +DQV HDV LQ LPVRFAIDRAGLVGADG TH GAFD
Sbjct: 400 GMAASGLKPFCTIYSTFLQRAYDQVVHDVALQGLPVRFAIDRAGLVGADGATHAGAFDIG 459
Query: 291 FMACLPNMVVM 301
++ LP M +M
Sbjct: 460 YLGNLPGMTLM 470
>gi|385206459|ref|ZP_10033329.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. Ch1-1]
gi|385186350|gb|EIF35624.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. Ch1-1]
Length = 650
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 149/375 (39%), Positives = 197/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ L G N
Sbjct: 104 MHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAAL----------GMAIASKLQGDNR 153
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 154 MGIAVIGDGAMTAGMAFEALNNAGVEDDVPLLVILNDNDMSISPPVGALNRHLARLMSG- 212
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + M ++ +R++E ++ A FE+ G YIGP+DG
Sbjct: 213 ---RFYAAARAGVERVLRVAPPMLDL---ARKLEEHAKGMIVPATLFEEFGFNYIGPIDG 266
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + A
Sbjct: 267 HDLDSLIPTLQNIKELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAT 324
Query: 180 LPLKLQQTRLFCKI------LDNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + LD R+ G G+G+ F+K FP R FDVGIAEQHAV
Sbjct: 325 TPSKKTYTQVFGEWLCDAAELDARVIGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAV 384
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLAAEG+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 385 TFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 444
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 445 YDLAFLRCIPNMTVM 459
>gi|350570639|ref|ZP_08938989.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria wadsworthii
9715]
gi|349795412|gb|EGZ49211.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria wadsworthii
9715]
Length = 626
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 148/376 (39%), Positives = 202/376 (53%), Gaps = 88/376 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +D FGVGHSSTSI A L GMAV L G++N
Sbjct: 90 MHTMRQYSGLAGFPKRSESEYDDFGVGHSSTSIGAAL----------GMAVADKLAGRSN 139
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNK----------ALKRLHSNPQFRQL 95
+++I +GA A ++EA+NNAG +LN AL + ++ R +
Sbjct: 140 RSVAIIGDGAMTAGQAFEALNNAGDMDIDLLVILNDNEMSISPNVGALPKYLASNVVRDM 199
Query: 96 CQEAFSSKDKKQKFGGQM-----------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
+ K++ K ++ H+I A + E + ++ FE+ G Y GPV
Sbjct: 200 RGVLSTIKNQTGKVLDKLPGALEIAQKVEHKIKAIASEGDHIKQSLSLFENFGFEYTGPV 259
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EK 177
DGHN+E L VL+++++ G L+HVIT+K +K
Sbjct: 260 DGHNVEHLVDVLRELRS--KKGPQLLHVITKKGNGYKLAERDPVKYHAIGKTPTASEADK 317
Query: 178 AMLPLKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQH 224
P K T++F + L DNR M G+GL F++ FP R FDVGIAEQH
Sbjct: 318 PAAPPKPTYTQIFGQWLIDQAEADNRLVAITPAMREGSGLVEFEQRFPERYFDVGIAEQH 377
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFAAGLA +G KP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAG+VGADGPTH
Sbjct: 378 AVTFAAGLACQGAKPVVAIYSTFLQRGYDQLVHDVALQNLPVMFAVDRAGIVGADGPTHA 437
Query: 285 GAFDTTFMACLPNMVV 300
G +D +F+ C+PNMV+
Sbjct: 438 GVYDLSFLRCIPNMVI 453
>gi|91777310|ref|YP_552518.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia xenovorans
LB400]
gi|118595499|sp|Q13RX1.1|DXS_BURXL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|91689970|gb|ABE33168.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia xenovorans
LB400]
Length = 635
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 197/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMAV L G N
Sbjct: 89 MHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAAL----------GMAVASKLKGDNR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 MGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + M ++ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLRVAPPMLDL---ARKLEEHAKGMIVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + A
Sbjct: 252 HDLDSLIPTLQNIKELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAA 309
Query: 180 LPLKLQQTRLFCKI------LDNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + LD R+ G G+G+ F+K FP R FDVGIAEQHAV
Sbjct: 310 TPSKKTYTQVFGEWLCDAAELDARVIGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLAAEG+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 430 YDLAFLRCIPNMTVM 444
>gi|170691119|ref|ZP_02882285.1| deoxyxylulose-5-phosphate synthase [Burkholderia graminis C4D1M]
gi|170144368|gb|EDT12530.1| deoxyxylulose-5-phosphate synthase [Burkholderia graminis C4D1M]
Length = 635
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 149/375 (39%), Positives = 198/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ L G N
Sbjct: 89 MHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAAL----------GMAIASKLQGDNR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 MGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + M ++ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLRVAPPMLDL---ARKLEEHAKGMIVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + A
Sbjct: 252 HDLDSLIPTLQNIKELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAS 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K FP R FDVGIAEQHAV
Sbjct: 310 APSKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLAA+G+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM+VM
Sbjct: 430 YDLAFMRCIPNMMVM 444
>gi|209517793|ref|ZP_03266628.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. H160]
gi|209501739|gb|EEA01760.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. H160]
Length = 635
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 149/375 (39%), Positives = 198/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMAV L G N
Sbjct: 89 MHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAAL----------GMAVASKLQGDNR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 MGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + + ++ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLRVAPPVLDL---ARKLEEHAKGMIVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + A
Sbjct: 252 HDLDSLIPTLQNIKELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAA 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K FP R FDVGIAEQHAV
Sbjct: 310 TPSKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLAA+G+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM VM
Sbjct: 430 YDLAFMRCIPNMTVM 444
>gi|269926957|ref|YP_003323580.1| deoxyxylulose-5-phosphate synthase [Thermobaculum terrenum ATCC
BAA-798]
gi|269790617|gb|ACZ42758.1| deoxyxylulose-5-phosphate synthase [Thermobaculum terrenum ATCC
BAA-798]
Length = 640
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 146/369 (39%), Positives = 188/369 (50%), Gaps = 80/369 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ HD FG GH+STSISA L GMAV RD+ G++
Sbjct: 90 MHTIRQYGGLAPFLMREESPHDQFGAGHASTSISAAL----------GMAVARDMQGEDY 139
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN----PQFRQLCQEAFS 101
HV++VI +GA M+ EA+NN G +LN ++ N P+ + + +
Sbjct: 140 HVVAVIGDGALTGGMALEALNNLGHLGTKMIVLLNDNEMSIYPNVGVVPRLLTRLRTSRT 199
Query: 102 SKDKKQKFGGQMHEIDAFSREIEAGSR-----------ACFFEDLGLYYIGPVDGHNLED 150
K + + A +E G R +E+LGL Y+GP+DGHNL D
Sbjct: 200 YHRAKGDVVSILQRMPAGDALVELGKRFKDSVKELVIPNMMWEELGLTYLGPIDGHNLAD 259
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQ------------------------- 185
L L K + P VLIH IT K K P + +
Sbjct: 260 LQETLTLAKQLDRP--VLIHAITIKGKGFEPAEAESKTHKWHSVTPKSPGKSDNKPSAPR 317
Query: 186 ------QTRLFCKILDNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
QT + D R+ G GT L+ F K FP R FDVGIAEQHAVTFAAGL
Sbjct: 318 YQDVFAQTLIRLAEEDERIVGITAAMPDGTSLDQFGKRFPDRMFDVGIAEQHAVTFAAGL 377
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
AA G++P AIYS+FLQR +DQV HDV +Q LPV FA+DRAG+ G DG TH GA D +++
Sbjct: 378 AAAGMRPVAAIYSTFLQRAYDQVVHDVAMQNLPVVFAMDRAGIAGNDGRTHHGALDISYL 437
Query: 293 ACLPNMVVM 301
C+PNM +M
Sbjct: 438 RCVPNMTLM 446
>gi|307726550|ref|YP_003909763.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1003]
gi|307587075|gb|ADN60472.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1003]
Length = 635
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/375 (39%), Positives = 199/375 (53%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ L G N
Sbjct: 89 MHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAAL----------GMAIASKLQGDNR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 MGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + M ++ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLRVAPPMLDL---ARKLEEHAKGMIVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + A+
Sbjct: 252 HDLDSLIPTLQNIKELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAV 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K FP R FDVGIAEQHAV
Sbjct: 310 SPSKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLAAEG+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM+VM
Sbjct: 430 YDLAFLRCIPNMMVM 444
>gi|182702006|ref|ZP_02619231.2| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum Bf]
gi|237795296|ref|YP_002862848.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum Ba4
str. 657]
gi|182672378|gb|EDT84339.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum Bf]
gi|229261093|gb|ACQ52126.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum Ba4
str. 657]
Length = 622
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 148/372 (39%), Positives = 201/372 (54%), Gaps = 88/372 (23%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
T+RQ GL E+ +D F GHSSTSISA L GMA RD+ G+NN
Sbjct: 92 NTLRQYGGLSGFPKKCESPYDVFETGHSSTSISAAL----------GMARARDIKGENNK 141
Query: 55 VISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQF 92
VI+VI +GA M++EA+N N G ++ L ++ +P +
Sbjct: 142 VIAVIGDGALTGGMAFEALNDLGFNKTDLIIILNDNQMSIAENVGGMSSYLSKVRLDPTY 201
Query: 93 RQLCQEAFSSKDKKQKFGGQMHEIDAFSRE-IEAGSR-----ACFFEDLGLYYIGPVDGH 146
+L +E ++ +K G M A S E ++ G + FFE+LG+ Y+GP+DGH
Sbjct: 202 NKLKKEVNNTLNKIPNVGKGM----ARSLERVKNGIKQMIVPGMFFENLGIKYLGPIDGH 257
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML-----PLK------------------ 183
++++L+ V+K K I P VLIH IT+K K P K
Sbjct: 258 DIKELSKVMKMAKDIKGP--VLIHTITKKGKGYAYAEKKPDKFHGIGPFDCTSGEINSKA 315
Query: 184 -LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
L + +F + L DNR M GTGL F + FP R FDVGIAEQHAVT A
Sbjct: 316 CLTYSGVFGEELTKIGKEDNRVVAITAAMKDGTGLRKFGETFPKRFFDVGIAEQHAVTLA 375
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AG+A EGLKP A+YS+FLQR +DQ+ HD+ +Q LPV FAIDRAG+VG+DG TH G FD
Sbjct: 376 AGIATEGLKPVFAVYSTFLQRAYDQILHDICIQNLPVVFAIDRAGIVGSDGETHQGIFDL 435
Query: 290 TFMACLPNMVVM 301
++++ LPNM +M
Sbjct: 436 SYLSSLPNMTIM 447
>gi|238024939|ref|YP_002909171.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia glumae BGR1]
gi|237879604|gb|ACR31936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia glumae BGR1]
Length = 634
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 148/375 (39%), Positives = 198/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+V+D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MATLRQFDGISGFPRRSESVYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEHAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIKELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSA 309
Query: 180 LPLKLQQTRLF----CKI--LDNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F C + LD R+ G G+G+ F+K FP R +DVGIAEQHAV
Sbjct: 310 APAKKTYTQVFGEWLCDMAELDARVVGITPAMREGSGMVEFEKRFPARYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HD+ LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDIALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 430 YDLAFLRCIPNMTVM 444
>gi|295700828|ref|YP_003608721.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1002]
gi|295440041|gb|ADG19210.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1002]
Length = 650
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/375 (39%), Positives = 198/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ L G N
Sbjct: 104 MHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAAL----------GMAIASKLQGDNR 153
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 154 MGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISPPVGALNRHLARLMSG- 212
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + + ++ +R++E ++ A FE+ G YIGP+DG
Sbjct: 213 ---RFYAAARAGVERVLRVAPPVLDL---ARKLEEHAKGMIVPATLFEEFGFNYIGPIDG 266
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + A
Sbjct: 267 HDLDSLIPTLQNIKELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAA 324
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K FP R FDVGIAEQHAV
Sbjct: 325 TPSKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAV 384
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLAA+G+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 385 TFAGGLAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 444
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM VM
Sbjct: 445 YDLAFMRCIPNMTVM 459
>gi|291287804|ref|YP_003504620.1| deoxyxylulose-5-phosphate synthase [Denitrovibrio acetiphilus DSM
12809]
gi|290884964|gb|ADD68664.1| deoxyxylulose-5-phosphate synthase [Denitrovibrio acetiphilus DSM
12809]
Length = 618
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/367 (38%), Positives = 191/367 (52%), Gaps = 80/367 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
++RQ GL E+ DAFGVGH+STSISAGL GM + +++G+ +
Sbjct: 90 SLRQFKGLSGFNKISESSFDAFGVGHTSTSISAGL----------GMRLADEIVGRKRKI 139
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQ---FRQLCQEAFSSKDKK 106
ISVI +GA A M++EA+NN G L+K + + +P F +SK
Sbjct: 140 ISVIGDGAMTAGMAFEALNNLGELDKDMIVVLNDNEMSISPNVGGFSHYLSSMMTSKFYT 199
Query: 107 QKFGGQMHEID---------AFSREIEAGSRACF-----FEDLGLYYIGPVDGHNLEDLA 152
+ H ++ A ++++E G F FE+LGL YIGPV GH D+
Sbjct: 200 RVRKEIQHRLEEKPLGPRLLAIAKKMEEGMVGFFTPGILFEELGLRYIGPVQGHKTRDIV 259
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLP---------------------LKLQQTRLFC 191
L V A G VLIHV+T+K K P +KL + +
Sbjct: 260 KAL--VNAKGQDGPVLIHVLTKKGKGYKPAEDNPSKFHGVASFNIETGESVKLAGAKSYT 317
Query: 192 KI-----------------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
I + M GTGLN F+ FP R FDVGIAEQHAVT A+G+A
Sbjct: 318 DIFGETLTEMAECNQRIVGISAAMKDGTGLNAFEAKFPDRVFDVGIAEQHAVTMASGMAV 377
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
GLKPF A+YS+F+QR +DQ+ HDV LQ LPV +DR GLVGADGPTH GAFD +F+ C
Sbjct: 378 SGLKPFVAVYSTFMQRAYDQIIHDVALQNLPVVLCLDRGGLVGADGPTHHGAFDISFLRC 437
Query: 295 LPNMVVM 301
+PN+ +M
Sbjct: 438 VPNLTIM 444
>gi|225388186|ref|ZP_03757910.1| hypothetical protein CLOSTASPAR_01921 [Clostridium asparagiforme
DSM 15981]
gi|225045744|gb|EEG55990.1| hypothetical protein CLOSTASPAR_01921 [Clostridium asparagiforme
DSM 15981]
Length = 621
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/369 (38%), Positives = 192/369 (52%), Gaps = 85/369 (23%)
Query: 4 IRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVI 56
+RQ GL E+ +D F GHSSTSISAGL G+A GRD+LG++ V+
Sbjct: 90 LRQYGGLSGFPKRKESPYDCFDTGHSSTSISAGL----------GIAQGRDILGQDYEVV 139
Query: 57 SVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQFRQ 94
SVI +GA M+YEA+NNA G +++ L L + +
Sbjct: 140 SVIGDGALTGGMAYEALNNAARMKKNFIIVLNDNKMSISENVGGMSRYLNGLRTGSGYND 199
Query: 95 LCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR----ACFFEDLGLYYIGPVDGHNLED 150
L + ++ D+ G M ID R + + FE++G+ Y+GPVDGHN+
Sbjct: 200 LKKNVANALDRIPVVGAPM--IDKIKRTKNSIKQLFIPGMLFENMGITYLGPVDGHNISQ 257
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL--------------------- 189
L V ++ K + AVL+HV+T+K K P + +R
Sbjct: 258 LCKVFREAKKLDH--AVLVHVLTKKGKGYKPAEKNPSRFHGVDPFDVTTGKSLKEKPYPS 315
Query: 190 --------FCKILDNR---------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
C++ R M GTGL+ F +H+P R FDVGIAE HAVT AAG+
Sbjct: 316 YTEVFSRKLCQLAAERPNVVALTAAMPDGTGLSAFARHYPGRFFDVGIAEAHAVTSAAGM 375
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
AA GLKP A+YSSFLQR +DQV HDV +Q LPV FA+DRAGLVG+DG TH G FD +F+
Sbjct: 376 AAAGLKPVVAVYSSFLQRAYDQVLHDVCIQDLPVVFAVDRAGLVGSDGETHQGIFDYSFL 435
Query: 293 ACLPNMVVM 301
+PNM VM
Sbjct: 436 TSIPNMSVM 444
>gi|163782598|ref|ZP_02177595.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hydrogenivirga sp.
128-5-R1-1]
gi|159882171|gb|EDP75678.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hydrogenivirga sp.
128-5-R1-1]
Length = 628
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 151/365 (41%), Positives = 194/365 (53%), Gaps = 79/365 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+ +DAFG GHSSTSISA L G V +D+ G ++HV
Sbjct: 94 TLRQHGGIAGFLRREESPYDAFGAGHSSTSISAAL----------GFRVAKDMKGDDSHV 143
Query: 56 ISVIVEGATIARMSYEAINNAGVL--NKALKRLHSNPQFRQLCQEAFSS----------- 102
I+VI +GA A M++EA+NNAG L N+ + L+ N A S+
Sbjct: 144 IAVIGDGAMTAGMAFEALNNAGHLRPNRFIVILNDNEMSISPNVGAISTYLNRIISGHFV 203
Query: 103 KDKKQK-------FGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLEDLAY 153
++ +Q+ FG + E G S FE+LG YIG VDGHN+ L
Sbjct: 204 QESRQRIKSLLKHFGETPLRFMKLTEEFLKGLISPGVLFEELGFNYIGVVDGHNIAALEK 263
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKA-------------MLPLKLQQ------------TR 188
LK VK I P VL+HV T+K K + P K++ T
Sbjct: 264 TLKNVKDIEGP--VLLHVATKKGKGYPHAEEDPVKWHGVAPYKVESGEIIKKPSPPSWTS 321
Query: 189 LFCKI------LDNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAE 235
+F K +D+R M G+GL F K FP R FDVGIAEQHA TFA GLA E
Sbjct: 322 VFGKAVVELAEMDDRIVVITPAMREGSGLVEFSKRFPDRFFDVGIAEQHAATFAGGLACE 381
Query: 236 GLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACL 295
G++P + YS+FLQR +DQV HD+ LQKLPV FAIDR GLVG DGPTH G FD +++ C+
Sbjct: 382 GMRPIASYYSTFLQRAYDQVIHDIALQKLPVTFAIDRGGLVGDDGPTHHGVFDLSYLRCV 441
Query: 296 PNMVV 300
PNMVV
Sbjct: 442 PNMVV 446
>gi|410687145|ref|YP_006965280.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Sulfitobacter
guttiformis]
gi|399920087|gb|AFP55491.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Sulfitobacter
guttiformis]
Length = 630
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/360 (40%), Positives = 185/360 (51%), Gaps = 70/360 (19%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ D FG HSSTSISA L G V RD+
Sbjct: 92 MHTLRQEGGLSGFTKRSESEFDPFGAAHSSTSISAAL----------GFTVARDMGEATG 141
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF----------RQLCQEAFSSK 103
I+VI +G+ A M+YEA+NNAG + + + + ++ + R + +
Sbjct: 142 DAIAVIGDGSISAGMAYEAMNNAGAMGRRMFVILNDNEMSIAPPVGAMSRYMSGLTEFAN 201
Query: 104 DKKQKFGGQMHEIDAFSREIEAGS---RACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKA 160
G + + +R++ G+ ++ FE+LG YIGP+DGH++ L VL+ +
Sbjct: 202 GTLAALPGPLRDHARRARQLVTGAVEEQSTLFENLGFQYIGPIDGHDMGQLLGVLRAART 261
Query: 161 IPDPGAVLIHVITEKEKAMLPLKLQQ--------------------------TRLFCKIL 194
G VLIH T K K P + T +F K L
Sbjct: 262 RAT-GPVLIHCCTVKGKGYAPAEAASDSYHGVGKFDPVTGIQAKSKPNAPSYTEIFGKAL 320
Query: 195 DNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFC 241
M GGTGL++F K P R FDVGIAEQH VTFAAG+AA GLKPF
Sbjct: 321 TEEARRDPKIVAITAAMPGGTGLDIFAKTHPNRMFDVGIAEQHGVTFAAGVAAGGLKPFV 380
Query: 242 AIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
AIYSSFLQR +DQ+ HDV LQ LPVRFAIDRAGLVGADG TH GAFD ++ LPNMVVM
Sbjct: 381 AIYSSFLQRGYDQIVHDVALQNLPVRFAIDRAGLVGADGATHAGAFDIGYLVALPNMVVM 440
>gi|260893253|ref|YP_003239350.1| deoxyxylulose-5-phosphate synthase [Ammonifex degensii KC4]
gi|260865394|gb|ACX52500.1| deoxyxylulose-5-phosphate synthase [Ammonifex degensii KC4]
Length = 629
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 193/370 (52%), Gaps = 86/370 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+ +D FG GH+STSISA L G+A RDL G + V
Sbjct: 88 TLRQLGGVSGFPSREESPYDIFGTGHASTSISAAL----------GLAKARDLAGDHYAV 137
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
++VI +GA M+ EA+N N G L L RL S+P +R
Sbjct: 138 VAVIGDGALTGGMALEALNHAGHLQTDLIVVLNDNEMSISKNVGALANYLSRLRSDPAYR 197
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNL 148
+L +E S + FG ++ + F ++ + FFE+LG Y+GPVDGH+L
Sbjct: 198 RLQEEFESLTSRLPGFGPRLRD---FLSRLKGSVKYLVVPGMFFEELGFTYLGPVDGHHL 254
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
L +L++ +A+ P VL+HV+T K K P +
Sbjct: 255 PTLLRILERARALKGP--VLVHVVTRKGKGYKPAEEDPDLYHGVGPFNPETGELYSSSLP 312
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D R M GTGL LF + FP R FDVGIAEQHAVTFAAG
Sbjct: 313 TYTEIFGRTLVRLAEEDPRIVAITAAMPSGTGLKLFAQRFPHRFFDVGIAEQHAVTFAAG 372
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA G +P AIYS+FLQR +DQ+ HDV LQ+LPV FA+DRAG+VG DG TH G FD +
Sbjct: 373 LAVGGYRPVVAIYSTFLQRAYDQIIHDVCLQRLPVVFALDRAGIVGEDGATHQGLFDLAY 432
Query: 292 MACLPNMVVM 301
+ +P+MVVM
Sbjct: 433 LRSIPHMVVM 442
>gi|254462269|ref|ZP_05075685.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
HTCC2083]
gi|206678858|gb|EDZ43345.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacteraceae bacterium
HTCC2083]
Length = 642
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/374 (39%), Positives = 197/374 (52%), Gaps = 86/374 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKN- 52
+RT+R GL E+V+D FG HSSTSISA L G AV RDL G+
Sbjct: 94 IRTLRMKDGLSGFTKRSESVYDPFGAAHSSTSISAAL----------GFAVARDLGGEAP 143
Query: 53 ---NHVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQL 95
I+VI +G+ A M++EA+NNAG L K + + ++ + R
Sbjct: 144 GGLGDAIAVIGDGSISAGMAFEAMNNAGHLKKRMFVILNDNEMSIAPPVGALSSYLSRLY 203
Query: 96 CQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR---------ACFFEDLGLYYIGPVDGH 146
+E F +D K G + + RE ++ FE LG Y+GP+DGH
Sbjct: 204 AEEPF--QDLKTAAKGAVSLLPEPFREGAKRAKDMLKGMTVGGTLFEQLGFSYLGPIDGH 261
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------- 186
+++ L VL+ V+ G VLIHVIT+K K P + +
Sbjct: 262 DMDQLLPVLRTVQTRAT-GPVLIHVITKKGKGYAPAEAARDKGHATAKFDVLTGEQKKSP 320
Query: 187 ------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F + L D++ M GTGLN F + +P RCFDV IAEQH VT
Sbjct: 321 SNAPSYTKVFAESLLKEAAADDKICAVTAAMPDGTGLNQFAERYPSRCFDVAIAEQHGVT 380
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
F+A LAA G+KPFC +YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGADG TH GAF
Sbjct: 381 FSAALAAGGMKPFCTMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAF 440
Query: 288 DTTFMACLPNMVVM 301
DT +++ LP VM
Sbjct: 441 DTAYLSNLPGFTVM 454
>gi|85703516|ref|ZP_01034620.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. 217]
gi|85672444|gb|EAQ27301.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. 217]
Length = 661
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 189/371 (50%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+++D FG HSSTSISA L G AV RD+
Sbjct: 114 IRTLRQKDGLSGFTKRSESIYDPFGAAHSSTSISAAL----------GFAVARDMGQATG 163
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
I+VI +G+ A M+YEA+NNAG ++ L R++++
Sbjct: 164 DAIAVIGDGSISAGMAYEALNNAGAEGRRLFVILNDNEMSIAPPVGAMSSYLSRMYAS-- 221
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
L + A ++ + + E +R++ G FE+LG Y+GP+DGH++
Sbjct: 222 -EPLARMASLAEGFEAALPAPLRESAKRARQLVTGLTGSGTLFEELGFQYVGPIDGHDMG 280
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR--------------------- 188
L VL+ + G VLIH T K K P + R
Sbjct: 281 QLLSVLRAARTRAT-GPVLIHCCTVKGKGYAPAEGAADRGHGVSKFDPATGAQAKSKPGA 339
Query: 189 -----LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+F + L D+R M GTGL + FP R FDVGIAEQHAVTFAA
Sbjct: 340 PSYTGVFGQALTDEAARDDRIVAVTAAMPDGTGLTKMAERFPARVFDVGIAEQHAVTFAA 399
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+AA GLKPFCAIYS+FLQR +DQV HDV LQ LPVRFAIDRAGLVGADG TH GAFD
Sbjct: 400 GMAASGLKPFCAIYSTFLQRAYDQVVHDVALQGLPVRFAIDRAGLVGADGATHAGAFDIG 459
Query: 291 FMACLPNMVVM 301
++ LP M +M
Sbjct: 460 YLGNLPGMTLM 470
>gi|167842190|ref|ZP_02468874.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
MSMB43]
gi|424905504|ref|ZP_18329007.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
MSMB43]
gi|390928397|gb|EIP85801.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
MSMB43]
Length = 634
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 197/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MKTLRQLGGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSKLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIKELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K FP R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 430 YDLAFLRCIPNMTVM 444
>gi|121534495|ref|ZP_01666318.1| deoxyxylulose-5-phosphate synthase [Thermosinus carboxydivorans
Nor1]
gi|121306988|gb|EAX47907.1| deoxyxylulose-5-phosphate synthase [Thermosinus carboxydivorans
Nor1]
Length = 628
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 187/369 (50%), Gaps = 81/369 (21%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
T+RQ GL E+ HD FG GHSSTSIS+ L GMA+ RDLLG H
Sbjct: 90 ETLRQLGGLSGFPKRSESEHDVFGTGHSSTSISSAL----------GMALARDLLGAKYH 139
Query: 55 VISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQFR-----QLCQEAFSSKDKKQKF 109
V++VI +G+ +YEA+N+AG + L + ++ + + + +
Sbjct: 140 VVAVIGDGSLTGGQAYEALNHAGHMGSNLTVILNDNEMSIAKNVGAMSQYLARMRTAPTY 199
Query: 110 GGQMHEIDAFSREIEAGSRAC-------------------FFEDLGLYYIGPVDGHNLED 150
H+I+ R I A + FE+LG YIGP+DGHN+
Sbjct: 200 SRVKHDIEYLLRRIPAIGDSVAKTAERVKDSLKYLLVPGVIFEELGFTYIGPIDGHNIAS 259
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL-----FC----KILDN----- 196
L VL+Q K + P VLIHV+T+K K P + + FC +I+ N
Sbjct: 260 LVDVLQQAKNVRGP--VLIHVLTQKGKGYRPAECNADKFHGVGPFCVETGEIIKNGVNPT 317
Query: 197 ------------------------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
M GTGL F FP R FDVGIAE HAVT AAG+
Sbjct: 318 YTAVFGDALVELAEKDDRIIAITAAMPEGTGLKKFAARFPARFFDVGIAEPHAVTMAAGM 377
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
A +GL+P AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAG+VG DGPTH G FD +F+
Sbjct: 378 ATQGLRPVVAIYSTFLQRAYDQIVHDVCLQNLPVVFALDRAGIVGEDGPTHHGVFDLSFL 437
Query: 293 ACLPNMVVM 301
+PNMV+M
Sbjct: 438 RHIPNMVIM 446
>gi|399994532|ref|YP_006574772.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phaeobacter gallaeciensis
DSM 17395 = CIP 105210]
gi|398659087|gb|AFO93053.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 642
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 154/383 (40%), Positives = 194/383 (50%), Gaps = 104/383 (27%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG--- 50
+RT+R GL E+ D FG HSSTSISA L G AV RDL G
Sbjct: 94 IRTLRMKDGLSGFTKRSESPFDPFGAAHSSTSISAAL----------GFAVARDLGGVVP 143
Query: 51 -KNNHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLH 87
I+VI +G+ A M++EA+NNAG L K L RL+
Sbjct: 144 EGLGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLIVILNDNEMSIAPPVGALSSYLSRLY 203
Query: 88 SNPQFRQL----------CQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGL 137
+ F++L E F K+ K D G+ FE LG
Sbjct: 204 AEEPFQELKAVAKGAASLLPEPFREGAKRAK--------DMLKGMAVGGT---LFESLGF 252
Query: 138 YYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------- 186
Y+GP+DGH+++ L VL+ VKA G +LIHV+T+K K P + +
Sbjct: 253 SYLGPIDGHDMDQLLPVLRTVKARAT-GPILIHVLTKKGKGYAPAEAARDKGHATAKFDM 311
Query: 187 ---------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDV 218
T +F K L D++ M GTGL+L + +P R FDV
Sbjct: 312 VTGEQKKAPSNAPSYTSVFGKELVRLAAEDDKICAVTAAMPDGTGLSLMAERYPSRTFDV 371
Query: 219 GIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGA 278
GIAEQH VTFAA LAA G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGA
Sbjct: 372 GIAEQHGVTFAAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGA 431
Query: 279 DGPTHCGAFDTTFMACLPNMVVM 301
DG TH G+FD +MA LP MVVM
Sbjct: 432 DGATHAGSFDIAYMANLPGMVVM 454
>gi|218132229|ref|ZP_03461033.1| hypothetical protein BACPEC_00086 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992888|gb|EEC58888.1| 1-deoxy-D-xylulose-5-phosphate synthase [[Bacteroides]
pectinophilus ATCC 43243]
Length = 629
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/352 (39%), Positives = 186/352 (52%), Gaps = 73/352 (20%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +DAF GHSSTSISAGL G A R++ G++ HVISVI +GA M+Y
Sbjct: 108 ESNYDAFDTGHSSTSISAGL----------GYASARNITGEDYHVISVIGDGALTGGMAY 157
Query: 71 EAINNAG--------VLNKALKRLHSN----PQFRQLCQEAFSSKDKKQKFGGQMHEI-- 116
EA+NNA VLN + N + + ++S D K+ +H++
Sbjct: 158 EALNNASSLKKNFIIVLNDNSMSISENVGGISRILDDVRSSYSYYDLKEDVKNTLHKLPN 217
Query: 117 -DAFSREIEAGSRAC--------FFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAV 167
DA +I+ FED+G+ Y+GPVDGHN+ L + K + P V
Sbjct: 218 GDALVEKIKKTKSNIKQFIVPGQIFEDMGIQYLGPVDGHNIHKLIKIFNIAKRVDSP--V 275
Query: 168 LIHVITEKEKAMLPLKLQQTRL-----------------------------FCKILDNR- 197
L+HV+T+K P + +R C I N
Sbjct: 276 LVHVVTQKGHGYAPAEKNPSRFHGIGPFDIKTGKSLSVGKGESYSAVFSRKICDIAKNDR 335
Query: 198 --------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQ 249
M GTGL+ F+K FP R FDVGIAE+HAVTF+AGLAA G+KP A+YSSFLQ
Sbjct: 336 SVVAITAAMPDGTGLDKFKKWFPDRFFDVGIAEEHAVTFSAGLAAGGMKPVFAVYSSFLQ 395
Query: 250 RCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
R FDQ+ HDV +Q+L V FAIDRAGLVG+DG TH G FD +F++ +PNM ++
Sbjct: 396 RAFDQILHDVCMQQLHVVFAIDRAGLVGSDGETHQGIFDLSFLSVIPNMTII 447
>gi|319788993|ref|YP_004150626.1| deoxyxylulose-5-phosphate synthase [Thermovibrio ammonificans HB-1]
gi|317113495|gb|ADU95985.1| deoxyxylulose-5-phosphate synthase [Thermovibrio ammonificans HB-1]
Length = 617
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/362 (39%), Positives = 190/362 (52%), Gaps = 75/362 (20%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
+T+RQ G+ E+ +DAFG GHSSTSISA L G+ VG+ L G+ H
Sbjct: 88 KTLRQFGGISGFPSIKESPYDAFGTGHSSTSISAAL----------GIKVGKRLKGEEGH 137
Query: 55 VISVIVEGATIARMSYEAINNAGVLNKAL------------KRLHSNPQFRQLCQEAFSS 102
VI+VI +GA A +YE +NNAG L + L K + + + S
Sbjct: 138 VIAVIGDGALTAGEAYEGLNNAGQLKEDLIVILNDNEMSISKNIGAISNYLTKLTTGESL 197
Query: 103 KDKKQKFGGQMHEI--DAFSREIEAGSR---------ACFFEDLGLYYIGPVDGHNLEDL 151
+ K++ +I D F + ++ FE+LG Y+GP+DGH++E L
Sbjct: 198 RRAKERLEEVTKKIFGDTFYKGLKRVEDLIVKGLFPPGMLFEELGFRYVGPIDGHDIETL 257
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------------TRLFC 191
L+ V + P L+HV+T+K K P + + T +F
Sbjct: 258 VTTLRNVSKMRGP--TLVHVLTKKGKGHKPAEERPDKFHGVSPKKLLSEPQPPTYTEVFS 315
Query: 192 KIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLK 238
K L M GTGL+ F FP R FDVGIAEQHAVTFAAGLA +GL+
Sbjct: 316 KTLVEMAEKDSSIVAITAAMPSGTGLDRFAARFPERYFDVGIAEQHAVTFAAGLAKKGLR 375
Query: 239 PFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNM 298
P AIYS+FLQR +DQ+ HDV LQ+LPV FAIDRAGLVG DG TH GAFD +++ +PN+
Sbjct: 376 PVVAIYSTFLQRAYDQIIHDVALQELPVTFAIDRAGLVGEDGATHHGAFDLSYLRVVPNL 435
Query: 299 VV 300
VV
Sbjct: 436 VV 437
>gi|221633258|ref|YP_002522483.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermomicrobium roseum DSM
5159]
gi|254782085|sp|B9L1L6.1|DXS_THERP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|221156054|gb|ACM05181.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermomicrobium roseum DSM
5159]
Length = 629
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 148/366 (40%), Positives = 187/366 (51%), Gaps = 83/366 (22%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TIRQ GL E+ HD FG GH+STSISA L GMAV L G H
Sbjct: 90 TIRQEGGLSGFLQREESPHDHFGAGHASTSISAAL----------GMAVAAKLRGDRYHT 139
Query: 56 ISVIVEGATIARMSYEAINNAGVLN----------------------KALKRLHSNPQFR 93
I+VI +GA M+YEA+N+AG L + L R+ ++ ++R
Sbjct: 140 IAVIGDGALTGGMAYEALNHAGALQVPLIVVLNDNEMSIAPNVGALARYLTRVRTDTRYR 199
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
Q E ++ G ++ E+ D E R +E+LG YIGP+DGHNL
Sbjct: 200 QAKVE-IERLLRRLPQGERLVELSHRFLDGLK---EVVYRTMIWEELGFTYIGPIDGHNL 255
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK------------------------- 183
+L + VK P V +HV+T K K P +
Sbjct: 256 RELIETFQLVKTFDSP--VFVHVLTVKGKGYQPAEDDPFKHHSAAVKVPGAPPTPPRYQD 313
Query: 184 -LQQTRLFCKILDNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAE 235
QT + ++R M GTGL F +P R FDVGIAEQHAVTFAAGLA +
Sbjct: 314 VFGQTLVELAAKNDRIVAITAAMPDGTGLLPFAAAYPDRFFDVGIAEQHAVTFAAGLATQ 373
Query: 236 GLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACL 295
GL+P CAIYS+FLQR +DQV HDV +QKLPV FA+DRAGLVG DG TH G FD ++ CL
Sbjct: 374 GLRPVCAIYSTFLQRAYDQVIHDVCIQKLPVVFAMDRAGLVGEDGRTHHGVFDVAYLRCL 433
Query: 296 PNMVVM 301
PNMV+M
Sbjct: 434 PNMVLM 439
>gi|257095635|ref|YP_003169276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048159|gb|ACV37347.1| deoxyxylulose-5-phosphate synthase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 629
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 145/354 (40%), Positives = 190/354 (53%), Gaps = 79/354 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D FGVGHSSTSISA L GMA+ + G+ V+++I +GA A ++
Sbjct: 108 ESRYDTFGVGHSSTSISAAL----------GMALAAKIKGETRKVVAIIGDGAMSAGQAF 157
Query: 71 EAINNAGV----------------------LNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNAGV LN+ L RL S F A + +K
Sbjct: 158 EALNNAGVADADMLVILNDNDMSISPPVGALNRYLARLFSGSTF----NAARKAGEKILD 213
Query: 109 FGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGA 166
F + E + E G + FE+LGL YIGP+DGH+LE L L+ +K + P
Sbjct: 214 FSPSLREFAKRAEEHVKGMLTPGTLFEELGLNYIGPIDGHDLESLVPTLQNLKHLKGP-- 271
Query: 167 VLIHVITEKEKA-----MLPL---------------------KLQQTRLFCKIL------ 194
+HVIT+K + + P+ K T++F L
Sbjct: 272 QFLHVITKKGQGYKLAEVDPILYHGVSKFKPEVGIAGGPTGAKPTYTQVFGDWLCDMAAA 331
Query: 195 DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSF 247
D R+ G G+GL F + +P R +DVGIAEQHAVTFAAGLA EGL+P AIYS+F
Sbjct: 332 DPRLVGITPAMREGSGLLRFSERYPQRYYDVGIAEQHAVTFAAGLACEGLRPVLAIYSTF 391
Query: 248 LQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
LQR +DQ+ HDV LQ LPV FA+DR GLVGADGPTH GAFD +F+ C+PN+VVM
Sbjct: 392 LQRGYDQLVHDVALQNLPVVFALDRGGLVGADGPTHHGAFDISFLTCIPNLVVM 445
>gi|373106593|ref|ZP_09520895.1| 1-deoxy-D-xylulose-5-phosphate synthase [Stomatobaculum longum]
gi|371652287|gb|EHO17705.1| 1-deoxy-D-xylulose-5-phosphate synthase [Stomatobaculum longum]
Length = 621
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 190/356 (53%), Gaps = 80/356 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
EN DAF GHSSTSISAGL GMA RDL G+++ VISVI +GA M+Y
Sbjct: 105 ENPCDAFNTGHSSTSISAGL----------GMATARDLRGEHHAVISVIGDGALTGGMAY 154
Query: 71 EAINNAG--------VLNKA--------------LKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNAG VLN L + ++ + +L + +
Sbjct: 155 EALNNAGRMKSNFIIVLNDNRMSISENVGGMSAYLNSIRTSAGYNRLKENVAEALSAIPG 214
Query: 109 FGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
G +M E R + G + F FE+LG+ Y+GPVDGH+++ + V ++ + +
Sbjct: 215 LGKRMVE---SLRTTKNGIKQLFVPGMLFENLGVTYLGPVDGHDIKKMMRVFEEARRLNR 271
Query: 164 PGAVLIHVITEKEKAMLPLKLQQ-------------------------TRLFCKIL---- 194
AVL+HVITEK K P + T +F K L
Sbjct: 272 --AVLVHVITEKGKGYRPAERHPDLFHGVGPFELATGVPKKNKHYPDYTDVFSKTLIQLA 329
Query: 195 --DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS 245
D+R M GTGL F + +P R FDVGIAEQHAVT AAGLAA G+KP A+YS
Sbjct: 330 AEDSRIVAVTAAMPEGTGLAAFGRRYPQRYFDVGIAEQHAVTSAAGLAAGGMKPVVAVYS 389
Query: 246 SFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
SFLQR FDQV HDV +Q LPV FAIDRAGLVGADG TH G FD +++ C+PNM ++
Sbjct: 390 SFLQRGFDQVLHDVCIQNLPVVFAIDRAGLVGADGETHQGVFDLSYLGCIPNMTIL 445
>gi|325265405|ref|ZP_08132129.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium sp. D5]
gi|324029406|gb|EGB90697.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium sp. D5]
Length = 624
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 143/349 (40%), Positives = 192/349 (55%), Gaps = 74/349 (21%)
Query: 15 DAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSYEAIN 74
DAF GHSSTSISAGL G RD+LG+ ++V+S+I +GA M+YEA+N
Sbjct: 108 DAFDTGHSSTSISAGL----------GYVAARDILGEEHYVVSIIGDGAMTGGMAYEALN 157
Query: 75 NAG--------VLNKALKRLHSN--PQFRQL----CQEAFSS-----KDKKQKFGGQMHE 115
NA VLN + N R L EA++ +D K Q +
Sbjct: 158 NASRLKSNFIIVLNDNNMSISENVGGMSRYLNGLRTAEAYTGLKKGVEDTLLKIPVQGEK 217
Query: 116 IDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIH 170
I ++ ++G + FFED+G+ Y+GPVDGH+++ L L + K + AVLIH
Sbjct: 218 IVNQMKKTKSGIKQLIVPGMFFEDMGITYLGPVDGHDVKKLYKTLNEAKRVDH--AVLIH 275
Query: 171 VITEKEKAMLP-------------------------LKLQQTRLFCKIL------DNR-- 197
V+T+K K P +K T +F K++ DN+
Sbjct: 276 VLTKKGKGYEPAEENPALYHGTGPFDVETGKAKDAAVKDSYTDVFSKVICDIARHDNKVA 335
Query: 198 -----MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCF 252
M GTGL+ FQK++P R FDVGIAE+HA+TFAAGLAA G+KP A+YSSFLQR +
Sbjct: 336 AITAAMADGTGLHRFQKYYPERFFDVGIAEEHALTFAAGLAAGGMKPVVALYSSFLQRAY 395
Query: 253 DQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DQ HD+ LQKLPV A+DR GLVG+DG TH G FD +F+A +PNM +M
Sbjct: 396 DQAIHDICLQKLPVVLAVDRGGLVGSDGETHQGLFDLSFLATIPNMTIM 444
>gi|169831189|ref|YP_001717171.1| deoxyxylulose-5-phosphate synthase [Candidatus Desulforudis
audaxviator MP104C]
gi|229813271|sp|B1I3J6.1|DXS_DESAP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|169638033|gb|ACA59539.1| deoxyxylulose-5-phosphate synthase [Candidatus Desulforudis
audaxviator MP104C]
Length = 634
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 148/370 (40%), Positives = 197/370 (53%), Gaps = 86/370 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ GL E+ +D FG GHSSTSISA L GMA+ RDL G++ +V
Sbjct: 90 TLRQFEGLSGFPNRNESEYDCFGTGHSSTSISAAL----------GMALARDLSGEDRNV 139
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLN--------------KALKRLHSNPQFR 93
++VI +GA M++EA+N AG VLN + L RL ++P +
Sbjct: 140 VAVIGDGALSGGMAFEALNQAGHLGCRLIVVLNDNEMSIARNVGAMARYLSRLRTDPMYS 199
Query: 94 QLCQEAFSSKDKKQKFG----GQMHEI-DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+ E S + G G + I D+ + AG FE+LG Y+GP+DGHN+
Sbjct: 200 RSKDEVESLLRRIPAIGPRVLGWIERIKDSLKYLVVAG---MLFEELGFTYLGPIDGHNI 256
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPL------------------------KL 184
+ V +Q +A+ P VL+HV+T+K K P ++
Sbjct: 257 PAMLNVFRQAQAVEGP--VLVHVLTKKGKGYAPAEKNPDKFHGVGPFDPATGNTPTDARV 314
Query: 185 QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D+R M GTGL F + FP R FDVGIAEQHAVT AAG
Sbjct: 315 SFTEVFGRTLVQLAEADSRILAITAAMTSGTGLGPFSRRFPQRFFDVGIAEQHAVTLAAG 374
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG +P AIYS+FLQR +DQV HDV LQKLPV FA+DR G+VG DG TH G FD +F
Sbjct: 375 LAVEGYRPVVAIYSTFLQRAYDQVLHDVCLQKLPVVFALDRGGIVGEDGVTHQGVFDFSF 434
Query: 292 MACLPNMVVM 301
+ +PN+V+M
Sbjct: 435 LRPVPNLVMM 444
>gi|186472775|ref|YP_001860117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia phymatum
STM815]
gi|229813274|sp|B2JP68.1|DXS_BURP8 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|184195107|gb|ACC73071.1| deoxyxylulose-5-phosphate synthase [Burkholderia phymatum STM815]
Length = 632
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 198/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MSTLRQLGGISGFPKRDESPYDTFGTAHSSTSISAAL----------GMAIGSKLRGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FAIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + + ++ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLRHAPPVLDL---ARKLEEHAKGMIVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIKELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K FP R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGMKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 430 YDLAFMRCIPNMTIM 444
>gi|167724591|ref|ZP_02407827.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
DM98]
gi|167743542|ref|ZP_02416316.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
14]
gi|167899159|ref|ZP_02486560.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
7894]
gi|167923680|ref|ZP_02510771.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
BCC215]
gi|254184924|ref|ZP_04891513.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1655]
gi|386865571|ref|YP_006278519.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1026b]
gi|418397014|ref|ZP_12970764.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
354a]
gi|418536792|ref|ZP_13102461.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1026a]
gi|418544103|ref|ZP_13109415.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1258a]
gi|418550944|ref|ZP_13115891.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1258b]
gi|418556611|ref|ZP_13121235.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
354e]
gi|184215516|gb|EDU12497.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1655]
gi|385350375|gb|EIF56919.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1258b]
gi|385350772|gb|EIF57294.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1258a]
gi|385351684|gb|EIF58150.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1026a]
gi|385366776|gb|EIF72378.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
354e]
gi|385369578|gb|EIF74893.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
354a]
gi|385662699|gb|AFI70121.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1026b]
Length = 634
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 197/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSKLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIKELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K FP R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 430 YDLAFLRCIPNMTVM 444
>gi|403523639|ref|YP_006659208.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
BPC006]
gi|403078706|gb|AFR20285.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
BPC006]
Length = 651
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 197/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 106 MKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSKLNGDDR 155
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 156 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 214
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 215 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 268
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + +
Sbjct: 269 HDLDSLIPTLQNIKELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 326
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K FP R +DVGIAEQHAV
Sbjct: 327 TPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAV 386
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 387 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 446
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 447 YDLAFLRCIPNMTVM 461
>gi|356557843|ref|XP_003547220.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
chloroplastic-like [Glycine max]
Length = 487
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 137/216 (63%), Gaps = 39/216 (18%)
Query: 125 AGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EK 177
+ S + FE+LGLYYIGPVDGHN+ DL +L +VK G +IHV+TEK E+
Sbjct: 62 SSSGSTLFEELGLYYIGPVDGHNMNDLVAILNEVKNTETTGPCVIHVVTEKGHGYPYAER 121
Query: 178 AML---------PLKLQQ------TRLFCKI-----------------LDNRMGGGTGLN 205
A P +Q T+ + + MGGGTG+N
Sbjct: 122 AAAKYHVVSKFDPATGEQFKAKATTKSYSTYFAEALIAEAEADKDIIGIHAAMGGGTGMN 181
Query: 206 LFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLP 265
F + FP RCFDVGIAEQHAVTFAAGLA EG KPFCAI SSF+QR +DQV HDVDLQKLP
Sbjct: 182 HFLRRFPTRCFDVGIAEQHAVTFAAGLACEGFKPFCAINSSFMQRAYDQVVHDVDLQKLP 241
Query: 266 VRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
VRF IDRAGLVG DG THCGAFD TFMACLPNMVVM
Sbjct: 242 VRFGIDRAGLVGPDGCTHCGAFDVTFMACLPNMVVM 277
>gi|407473844|ref|YP_006788244.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium acidurici 9a]
gi|407050352|gb|AFS78397.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Clostridium acidurici
9a]
Length = 626
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 141/368 (38%), Positives = 196/368 (53%), Gaps = 81/368 (22%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+R+ G+ E++HDAF GHSSTSISAGL G A+ RD+ ++ V
Sbjct: 94 TLRKYKGISGFPKRKESIHDAFDTGHSSTSISAGL----------GYALSRDIKKEDYSV 143
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN----PQFRQLCQEAFSSK 103
+SVI +GA A M++EA+N+AG VLN + N ++ + + +
Sbjct: 144 VSVIGDGAMTAGMAFEALNHAGDIKSDLIVVLNDNEMSISENVGGLSRYLEGLRTTPTYF 203
Query: 104 DKKQKFGGQMHEIDAF-SREIEAGSRA-----------CFFEDLGLYYIGPVDGHNLEDL 151
K+ ++ I A R ++ RA FFED+G Y GP+DGHN+ ++
Sbjct: 204 KVKEDVEYILNSIPAIGKRVLKTAGRAKDSVKYFLVPGMFFEDIGFKYFGPIDGHNISEI 263
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAMLP---------------------LKLQQTRLF 190
VLK K + P VL+HV+T+K K P LK +
Sbjct: 264 MNVLKMAKKVGGP--VLVHVVTKKGKGYKPAEKHPDIFHGASSFDIETGESLKKNSKETY 321
Query: 191 CKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+L N M GTGL+ F+++F R FDVGIAEQH VTFAAGLA
Sbjct: 322 SDVLGNTLVELAEKDENIVAITAAMPSGTGLDSFRENFKDRFFDVGIAEQHGVTFAAGLA 381
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A G+KPF A+YS+FLQR +DQ+ HDV +QKLPV F IDRAGLVG DG TH G FD ++++
Sbjct: 382 ANGMKPFFAVYSTFLQRGYDQIIHDVCIQKLPVTFIIDRAGLVGDDGETHHGVFDLSYLS 441
Query: 294 CLPNMVVM 301
+PN+++M
Sbjct: 442 HMPNLIIM 449
>gi|126741030|ref|ZP_01756713.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. SK209-2-6]
gi|126717956|gb|EBA14675.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. SK209-2-6]
Length = 642
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 151/383 (39%), Positives = 191/383 (49%), Gaps = 104/383 (27%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG--- 50
+RT+R GL E+ +D FG HSSTSISA L G +V RDL G
Sbjct: 94 IRTLRMKEGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFSVARDLGGVIP 143
Query: 51 -KNNHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLH 87
N I+VI +G+ A M++EA+NNAG LNK L RL+
Sbjct: 144 EGNGDAIAVIGDGSMSAGMAFEAMNNAGHLNKRLFVVLNDNEMSIAPPVGALSSYLSRLY 203
Query: 88 SNPQFRQL----------CQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGL 137
+ F++L E F K+ K D G+ FE LG
Sbjct: 204 AEEPFQELKAVAKGAASLLPEPFREGAKRAK--------DMLKGMAVGGT---LFESLGF 252
Query: 138 YYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR--------- 188
Y+GP+DGH+++ L VL+ +KA G VLIHV+T+K K P + + +
Sbjct: 253 SYLGPIDGHDMDQLLPVLRTLKARAT-GPVLIHVLTKKGKGYGPAETARDKGHATAKFDV 311
Query: 189 -------------LFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDV 218
+ + N M GTGL L + +P R FDV
Sbjct: 312 LTGKQHKAPSNAPSYTSVFGNELVKLAAKDDKICAVTAAMPDGTGLALMAERYPSRTFDV 371
Query: 219 GIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGA 278
GIAEQH VTFA LAA G+KPFCA+YS+FLQR +DQV HDV LQ LPVRFAIDRAGLVGA
Sbjct: 372 GIAEQHGVTFAGALAAGGMKPFCAMYSTFLQRGYDQVVHDVALQGLPVRFAIDRAGLVGA 431
Query: 279 DGPTHCGAFDTTFMACLPNMVVM 301
DG TH G+FD F+A LP+MVVM
Sbjct: 432 DGATHAGSFDIGFLANLPSMVVM 454
>gi|121596455|ref|YP_991107.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei SAVP1]
gi|124381982|ref|YP_001025505.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei NCTC
10229]
gi|126445825|ref|YP_001077568.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei NCTC
10247]
gi|238561513|ref|ZP_00441961.2| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei GB8
horse 4]
gi|251767135|ref|ZP_02266099.2| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei
PRL-20]
gi|254177253|ref|ZP_04883909.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei ATCC
10399]
gi|254203075|ref|ZP_04909437.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei FMH]
gi|254359404|ref|ZP_04975676.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei
2002721280]
gi|121224253|gb|ABM47784.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei SAVP1]
gi|126238679|gb|ABO01791.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei NCTC
10247]
gi|147746120|gb|EDK53198.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei FMH]
gi|148028591|gb|EDK86551.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei
2002721280]
gi|160698293|gb|EDP88263.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei ATCC
10399]
gi|238524498|gb|EEP87931.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei GB8
horse 4]
gi|243063767|gb|EES45953.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei
PRL-20]
gi|261826589|gb|ABM99911.2| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei NCTC
10229]
Length = 651
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 197/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 106 MKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSKLNGDDR 155
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 156 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 214
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 215 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 268
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + +
Sbjct: 269 HDLDSLIPTLQNIKELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 326
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K FP R +DVGIAEQHAV
Sbjct: 327 TPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAV 386
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 387 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 446
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 447 YDLAFLRCIPNMTVM 461
>gi|53716443|ref|YP_105137.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei ATCC
23344]
gi|53722783|ref|YP_111768.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
K96243]
gi|76819327|ref|YP_336000.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1710b]
gi|126456504|ref|YP_001076424.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1106a]
gi|167820730|ref|ZP_02452410.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
91]
gi|167829089|ref|ZP_02460560.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
9]
gi|167850566|ref|ZP_02476074.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
B7210]
gi|167907502|ref|ZP_02494707.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
NCTC 13177]
gi|226195571|ref|ZP_03791158.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
Pakistan 9]
gi|242313679|ref|ZP_04812696.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1106b]
gi|254186153|ref|ZP_04892671.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
Pasteur 52237]
gi|254194253|ref|ZP_04900685.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
S13]
gi|254208408|ref|ZP_04914757.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei JHU]
gi|254263208|ref|ZP_04954073.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1710a]
gi|254301206|ref|ZP_04968650.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
406e]
gi|81606250|sp|Q63JF4.1|DXS_BURPS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|81684641|sp|Q62DU1.1|DXS_BURMA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|119368198|sp|Q3JKA3.1|DXS_BURP1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|166198604|sp|A3P7W4.1|DXS_BURP0 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|52213197|emb|CAH39237.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia pseudomallei
K96243]
gi|52422413|gb|AAU45983.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei ATCC
23344]
gi|76583800|gb|ABA53274.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1710b]
gi|126230272|gb|ABN93685.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1106a]
gi|147751095|gb|EDK58163.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei JHU]
gi|157810695|gb|EDO87865.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
406e]
gi|157933839|gb|EDO89509.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
Pasteur 52237]
gi|169651004|gb|EDS83697.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
S13]
gi|225932056|gb|EEH28056.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
Pakistan 9]
gi|242136918|gb|EES23321.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1106b]
gi|254214210|gb|EET03595.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
1710a]
Length = 634
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 197/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSKLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIKELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K FP R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 430 YDLAFLRCIPNMTVM 444
>gi|126443346|ref|YP_001063527.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
668]
gi|134278298|ref|ZP_01765012.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
305]
gi|167915841|ref|ZP_02502932.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
112]
gi|217422468|ref|ZP_03453971.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
576]
gi|166198605|sp|A3NMF6.1|DXS_BURP6 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|126222837|gb|ABN86342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
668]
gi|134250082|gb|EBA50162.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
305]
gi|217394699|gb|EEC34718.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
576]
Length = 634
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 197/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSKLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIKELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K FP R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 430 YDLAFLRCIPNMTVM 444
>gi|294676253|ref|YP_003576868.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter capsulatus SB
1003]
gi|141323|sp|P26242.1|DXS_RHOCA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|46140|emb|CAA77557.1| 641 aa (68 kD) gene product of ORF641 [Rhodobacter capsulatus]
gi|294475073|gb|ADE84461.1| 1-deoxy-D-xylulose-5-phosphate synthase-1 [Rhodobacter capsulatus
SB 1003]
Length = 641
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 149/372 (40%), Positives = 190/372 (51%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ HDAFG GHSSTSISA L G AVGR+L
Sbjct: 95 MLTLRQAGGISGFPKRSESPHDAFGAGHSSTSISAAL----------GFAVGRELGQPVG 144
Query: 54 HVISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQ------------FRQLCQEAF 100
I++I +G+ A M+YEA+N+AG L ++ L+ N + ++A
Sbjct: 145 DTIAIIGDGSITAGMAYEALNHAGHLKSRMFVILNDNDMSIAPPVGALQHYLNTIARQAP 204
Query: 101 SSKDKKQKFGGQMHEIDAFSREIEAGSR------------ACFFEDLGLYYIGPVDGHNL 148
+ K G +MH + G+R A FE+LG YIGPVDGH++
Sbjct: 205 FAALKAAAEGIEMH----LPGPVRDGARRARQMVTAMPGGATLFEELGFDYIGPVDGHDM 260
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL------------------- 189
+L L+ +A G VLIHV T K K P + + +L
Sbjct: 261 AELVETLRVTRARAS-GPVLIHVCTTKGKGYAPAEGAEDKLHGVSKFDIETGKQKKSIPN 319
Query: 190 ---FCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+ + R M GTGL++ QK FP R FDVGIAEQHAVTFA
Sbjct: 320 APNYTAVFGERLTEEAARDQAIVAVTAAMPTGTGLDIMQKRFPRRVFDVGIAEQHAVTFA 379
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AG+AA GLKPF A+YSSF+QR +DQ+ HDV LQ LPVR IDRAGLVG DG TH GAFD
Sbjct: 380 AGMAAAGLKPFLALYSSFVQRGYDQLVHDVALQNLPVRLMIDRAGLVGQDGATHAGAFDV 439
Query: 290 TFMACLPNMVVM 301
+ +A LPN VM
Sbjct: 440 SMLANLPNFTVM 451
>gi|153953856|ref|YP_001394621.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium kluyveri DSM
555]
gi|219854471|ref|YP_002471593.1| hypothetical protein CKR_1128 [Clostridium kluyveri NBRC 12016]
gi|189027772|sp|A5N7J2.1|DXS_CLOK5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|254782068|sp|B9E104.1|DXS_CLOK1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|146346737|gb|EDK33273.1| Dxs [Clostridium kluyveri DSM 555]
gi|219568195|dbj|BAH06179.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 624
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 194/370 (52%), Gaps = 86/370 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+V+D F GHSSTSISA L GMA RDL G+ ++V
Sbjct: 91 TLRQFGGISGFPKKCESVYDFFETGHSSTSISAAL----------GMARARDLKGEKHNV 140
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
++VI +GA M+ EA+N N G +++ L +L +P++
Sbjct: 141 VAVIGDGALTGGMALEALNDVGYRKTKLIIILNDNQMSIGKNVGGVSRYLNKLRVDPKYN 200
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNL 148
+ +E S+ K G M + + ++ G + FFED+G+ Y+GP+DGHN+
Sbjct: 201 KFKEEVESTLKKIPNIGKGMAK---YLERLKNGIKKMVVSGMFFEDIGIKYLGPIDGHNI 257
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAML-----PLKLQ---------------QTR 188
+DL V+ K + +P V+IHVIT+K K P K T
Sbjct: 258 KDLTEVMTAAKKVNNP--VIIHVITKKGKGYEFAEKNPGKFHGIGPFNCNNGEIAATSTN 315
Query: 189 LFCKILDNRMGG-----------------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+ K+ + M GTGL F K FP R FDVGIAEQHAVT A G
Sbjct: 316 TYSKVFGDEMVNLAREDKKIVVITAAMRDGTGLQNFAKEFPERFFDVGIAEQHAVTLAGG 375
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+A EGLKP A+YS+FLQR +DQ+ HD+ +QKLPV FA+DRAG+VG DG TH G FD ++
Sbjct: 376 MAVEGLKPVFAVYSTFLQRSYDQLLHDICIQKLPVVFAVDRAGIVGDDGETHQGIFDLSY 435
Query: 292 MACLPNMVVM 301
+ +PNM VM
Sbjct: 436 LTEMPNMTVM 445
>gi|237510266|ref|ZP_04522981.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
MSHR346]
gi|235002471|gb|EEP51895.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
MSHR346]
Length = 634
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 197/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSKLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIKELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K FP R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 430 YDLAFLRCIPNMTVM 444
>gi|420247660|ref|ZP_14751055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. BT03]
gi|398070554|gb|EJL61848.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. BT03]
Length = 632
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 200/375 (53%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G L G++
Sbjct: 89 MHSLRQLGGISGFPKRDESPYDTFGTAHSSTSISAAL----------GMAIGSKLRGEDA 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
+ I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 YSIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + + ++ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLRHAPPVLDL---ARKLEEHAKGMIVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIKELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K FP R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 430 YDLAFLRCIPNMTVM 444
>gi|86136863|ref|ZP_01055441.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. MED193]
gi|85826187|gb|EAQ46384.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. MED193]
Length = 642
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 153/383 (39%), Positives = 194/383 (50%), Gaps = 104/383 (27%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG--- 50
+RT+R GL E+ +D FG HSSTSISA L G +V RDL G
Sbjct: 94 IRTLRTKGGLSGFTKRSESPYDPFGAAHSSTSISAAL----------GFSVARDLGGVVP 143
Query: 51 -KNNHVISVIVEGATIARMSYEAINNAGVLNKA----------------------LKRLH 87
I+VI +G+ A M++EA+NNAG L K L RL+
Sbjct: 144 EGLGEAIAVIGDGSMSAGMAFEAMNNAGHLKKRMIVILNDNEMSIAPPVGALSSYLSRLY 203
Query: 88 SNPQFRQL----------CQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGL 137
+ F++L E F K+ K D G+ FE G
Sbjct: 204 AEEPFQELKAVAKGAASLLPEPFREGAKRAK--------DMLKGMAVGGT---MFESFGF 252
Query: 138 YYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------- 186
Y+GP+DGH+++ L VL+ VKA G VLIHV+T+K K P + +
Sbjct: 253 SYLGPIDGHDMDQLLPVLRTVKARAT-GPVLIHVLTKKGKGYGPAEAARDKGHATAKFDV 311
Query: 187 ---------------TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDV 218
T +F L D++ M GTGL+L + +P RCFDV
Sbjct: 312 VTGKQHKTPSNAPSYTGVFGDELVKLAAKDDKICAVTAAMPDGTGLSLMAERYPSRCFDV 371
Query: 219 GIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGA 278
GIAEQH VTFAA LAA G+KPFCA+YS+FLQR +DQV HDV +Q+LPVRFAIDRAGLVGA
Sbjct: 372 GIAEQHGVTFAAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGA 431
Query: 279 DGPTHCGAFDTTFMACLPNMVVM 301
DG TH G+FD +MA LP MVVM
Sbjct: 432 DGATHAGSFDIGYMANLPGMVVM 454
>gi|194337242|ref|YP_002019036.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309719|gb|ACF44419.1| deoxyxylulose-5-phosphate synthase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 659
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 190/380 (50%), Gaps = 96/380 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T RQ GL E+ HDAFGVGH+STSISA G+AV DL G +
Sbjct: 116 MQTNRQFGGLAGFPKRSESAHDAFGVGHASTSISAA----------AGIAVASDLAGGDE 165
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
VI+VI +G+ M++EA+N N G L L + N
Sbjct: 166 KVIAVIGDGSMTGGMAFEAMNHLGDLKSDVLVILNDNQMAISSNTGALRHHLVNISLNKT 225
Query: 92 F---RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRAC-----FFEDLGLYYIGPV 143
+ R+L ++ S + G + R+IE G +A FFE LGL Y GP+
Sbjct: 226 YNRARKLVWKSLSLLNN-----GLGDKAKKAVRKIEDGVKAALTPGAFFEALGLRYFGPI 280
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL-------------F 190
DGHN+E L LK+++ +P+P L+HVIT K K P + Q++
Sbjct: 281 DGHNMEQLVKALKEMQTLPNPK--LLHVITTKGKGFKPAEENQSKWHAHNGGFDTTTGKL 338
Query: 191 CKILDNR-----------------------------MGGGTGLNLFQKHFPIRCFDVGIA 221
K D M GT L+LFQ P R +DVGIA
Sbjct: 339 LKTADTSLPPKYQEVFGEALVELALKDSTITAITAAMPSGTSLDLFQNAIPNRFYDVGIA 398
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
E HAVTFAAGLA +G KP A+YS+FLQR +DQ+ HDV LQ L V FAIDRAGLVG DGP
Sbjct: 399 EAHAVTFAAGLATQGFKPVFAVYSTFLQRAYDQLIHDVALQNLHVVFAIDRAGLVGEDGP 458
Query: 282 THCGAFDTTFMACLPNMVVM 301
TH GAFD +++ +P +V+M
Sbjct: 459 THHGAFDLSWLHAVPGLVIM 478
>gi|167577163|ref|ZP_02370037.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
TXDOH]
Length = 634
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 197/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSKLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIKELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSA 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K FP R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 430 YDLAFLRCIPNMTVM 444
>gi|254446977|ref|ZP_05060444.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium
HTCC5015]
gi|198263116|gb|EDY87394.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium
HTCC5015]
Length = 633
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 144/365 (39%), Positives = 193/365 (52%), Gaps = 78/365 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TIR+ GL E+ +D FGVGHSSTSISA L GMA+ L G++
Sbjct: 98 TIRKKDGLTPFPKRKESEYDTFGVGHSSTSISAAL----------GMAMAARLNGEDRKA 147
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKALKRLHS-------------NPQFRQLCQEAFSS 102
+++I +GA A M++EA+NNAG LN + + + N F +L F S
Sbjct: 148 VAIIGDGAMTAGMAFEALNNAGDLNANMLVILNDNEMSISPNVGALNKYFTKLLSGRFYS 207
Query: 103 --KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAYVL 155
++ +K M ++ +R E + FE G Y GPVDGH++E ++ VL
Sbjct: 208 TVRESGKKALSPMPQLKELARRTEEHVKGMLTPGTLFEAFGFQYFGPVDGHDVETMSDVL 267
Query: 156 KQVKAIPDPGAVLIHVITEKEKAM--------------------------LPLKLQQTRL 189
+K I P L+HV+T+K K P T++
Sbjct: 268 DNIKDIKGP--CLLHVVTKKGKGYDKAEADQVKYHGVGQFDPAEGIQPSGAPSAPTYTQV 325
Query: 190 FCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEG 236
F + L + ++ G G+GL F+K FP R FDVGIAEQHAVT AAGLA +G
Sbjct: 326 FGQWLCDMAAAEPKLAGITPAMREGSGLVDFEKQFPERYFDVGIAEQHAVTLAAGLACDG 385
Query: 237 LKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLP 296
+KP AIYS+FLQR +DQ HDVD+Q L V FAIDRAGLVG DGPTH G+FD +F+ CLP
Sbjct: 386 IKPVVAIYSTFLQRAYDQAIHDVDIQNLDVLFAIDRAGLVGPDGPTHAGSFDYSFLRCLP 445
Query: 297 NMVVM 301
N +VM
Sbjct: 446 NTLVM 450
>gi|83717976|ref|YP_438814.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
E264]
gi|167615333|ref|ZP_02383968.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
Bt4]
gi|257141898|ref|ZP_05590160.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
E264]
gi|118595498|sp|Q2T7N5.1|DXS_BURTA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|83651801|gb|ABC35865.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
E264]
Length = 634
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 197/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSKLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIKELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSA 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K FP R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 430 YDLAFLRCIPNMTVM 444
>gi|417958051|ref|ZP_12600968.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria weaveri ATCC
51223]
gi|343967443|gb|EGV35688.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria weaveri ATCC
51223]
Length = 625
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 152/375 (40%), Positives = 200/375 (53%), Gaps = 88/375 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRT+RQ GL E+ +DAFGVGHSSTSI A L GMAV L G N
Sbjct: 91 MRTMRQYGGLAGFPKRSESDYDAFGVGHSSTSIGAAL----------GMAVADKLNGSPN 140
Query: 54 HVISVIVEGATIARMSYEAINNAG---------VLNKALKRLHSN----PQF--RQLCQE 98
+++I +GA A ++EA+N AG +LN + N P++ R + ++
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMEDVNLLVILNDNEMSISPNVGALPKYLARNVVRD 200
Query: 99 --AFSSKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGP 142
S K Q K G + H+I + E E ++ FE+ G Y GP
Sbjct: 201 MHGLLSTIKAQSTKVLDKLPGALEIAQKVEHKIKTIAGEAEHAKQSLSLFENFGFQYTGP 260
Query: 143 VDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK------------------------EKA 178
VDGH++E+L VLK ++A G ++HVIT+K EK
Sbjct: 261 VDGHDVENLVDVLKDLRA--KKGPQILHVITKKGQGYKLAENDPVKYHAIGKTNAPSEKP 318
Query: 179 MLPLKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHA 225
+P K T++F K L D R M G+GL +++ FP R FDVGIAEQHA
Sbjct: 319 AVP-KPTYTQIFGKWLCDQAASDPRLVAITPAMREGSGLVEYEQKFPERYFDVGIAEQHA 377
Query: 226 VTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCG 285
VTFA GLA EG KP AIYS+FLQR +DQ+ HD+ LQ LPV FAIDRAG+VGADGPTH G
Sbjct: 378 VTFAGGLACEGAKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAIDRAGIVGADGPTHAG 437
Query: 286 AFDTTFMACLPNMVV 300
+D +F+ C+PNMV+
Sbjct: 438 LYDLSFLRCVPNMVI 452
>gi|345874708|ref|ZP_08826508.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria weaveri LMG
5135]
gi|343970067|gb|EGV38265.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria weaveri LMG
5135]
Length = 625
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 152/375 (40%), Positives = 200/375 (53%), Gaps = 88/375 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRT+RQ GL E+ +DAFGVGHSSTSI A L GMAV L G N
Sbjct: 91 MRTMRQYGGLAGFPKRSESDYDAFGVGHSSTSIGAAL----------GMAVADKLNGSPN 140
Query: 54 HVISVIVEGATIARMSYEAINNAG---------VLNKALKRLHSN----PQF--RQLCQE 98
+++I +GA A ++EA+N AG +LN + N P++ R + ++
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMEDVNLLVILNDNEMSISPNVGALPKYLARNVVRD 200
Query: 99 --AFSSKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGP 142
S K Q K G + H+I + E E ++ FE+ G Y GP
Sbjct: 201 MHGLLSTIKAQSTKVLDKLPGALEIAQKVEHKIKTIAGEAEHAKQSLSLFENFGFQYTGP 260
Query: 143 VDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK------------------------EKA 178
VDGH++E+L VLK ++A G ++HVIT+K EK
Sbjct: 261 VDGHDVENLVDVLKDLRA--KKGPQILHVITKKGQGYKLAENDPVKYHAIGKTNAPSEKP 318
Query: 179 MLPLKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHA 225
+P K T++F K L D R M G+GL +++ FP R FDVGIAEQHA
Sbjct: 319 AVP-KPTYTQIFGKWLCDQAAADPRLVAITPAMREGSGLVEYEQKFPERYFDVGIAEQHA 377
Query: 226 VTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCG 285
VTFA GLA EG KP AIYS+FLQR +DQ+ HD+ LQ LPV FAIDRAG+VGADGPTH G
Sbjct: 378 VTFAGGLACEGAKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAIDRAGIVGADGPTHAG 437
Query: 286 AFDTTFMACLPNMVV 300
+D +F+ C+PNMV+
Sbjct: 438 LYDLSFLRCVPNMVI 452
>gi|392941053|ref|ZP_10306697.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacter
siderophilus SR4]
gi|392292803|gb|EIW01247.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacter
siderophilus SR4]
Length = 607
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 200/370 (54%), Gaps = 86/370 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+R+ GL E+VHD FG GHSSTSISA L G+A RDL G+ V
Sbjct: 75 TLRKFNGLSGYTKRTESVHDIFGAGHSSTSISAAL----------GIAKARDLKGEKYSV 124
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKA--------------LKRLHSNPQFR 93
++VI +GA M++EA+NNAG VLN L +L ++P +
Sbjct: 125 VAVIGDGALTGGMAFEALNNAGRSKTDLIVVLNHNEMSISENVGSLSLYLSKLRTDPTYN 184
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+L QE + + G +H+ D+ + + G FFE++G Y+GP+DGH++
Sbjct: 185 KLKQEVDNLLNIVPPIGKSLHKYIERIKDSVKQLVVPG---MFFEEMGFTYLGPIDGHDV 241
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEK-------------AMLPLKLQQTR------- 188
+ L VL++ K I P +L+HVIT+K K + P +Q +
Sbjct: 242 DSLIEVLERAKKIKGP--ILVHVITKKGKGYKFAEKFPDKFHSAAPFDIQTGKFVNEGQA 299
Query: 189 ----LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F K L D++ M GTGL F K P R FDVGIAEQHA TFAAG
Sbjct: 300 TYSDVFGKTLTEMALKDDKIVAITAAMPEGTGLIHFAKLIPERFFDVGIAEQHATTFAAG 359
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+A +G KP+ A+YS+FLQR +DQ+ HDV +QKLPV FAIDRAG+VG DG TH G FD ++
Sbjct: 360 MAVQGYKPYFAVYSTFLQRAYDQLIHDVCIQKLPVVFAIDRAGIVGEDGETHQGVFDLSY 419
Query: 292 MACLPNMVVM 301
+ +PN+ +M
Sbjct: 420 LRPIPNIAIM 429
>gi|170760576|ref|YP_001787209.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum A3
str. Loch Maree]
gi|169407565|gb|ACA55976.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum A3
str. Loch Maree]
Length = 622
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 201/372 (54%), Gaps = 88/372 (23%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
T+RQ GL E+ +DAF GHSSTSISA L GMA RD+ G++N
Sbjct: 92 NTLRQYGGLSGFPKKCESPYDAFETGHSSTSISAAL----------GMARARDIKGEDNK 141
Query: 55 VISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQF 92
VI+VI +GA M++EA+N N G ++ L ++ +P +
Sbjct: 142 VIAVIGDGALTGGMAFEALNDLGFNKTDLIIILNDNQMSIAENVGGMSSYLSKVRLDPTY 201
Query: 93 RQLCQEAFSSKDKKQKFGGQMHEIDAFSRE-IEAGSR-----ACFFEDLGLYYIGPVDGH 146
+L +E ++ +K G M A S E ++ G + FFE+LG+ Y+GP+DGH
Sbjct: 202 NKLKKEVNNTLNKIPNVGKGM----ARSLERVKNGIKQMIVPGMFFENLGIKYLGPIDGH 257
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML-----PLK------------------ 183
++++L+ V+K K I P VLIH IT+K K P K
Sbjct: 258 DIKELSKVMKMAKDIKGP--VLIHTITKKGKGYAYAEKKPDKFHSIGSFDCTSGEINSKA 315
Query: 184 -LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
L + +F + L D R M GTGL F + FP R FDVGIAEQHAVT A
Sbjct: 316 CLSYSGVFGEELTKIGKEDKRVVAITAAMKDGTGLRKFAETFPKRFFDVGIAEQHAVTLA 375
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AG+A EGLKP A+YS+FLQR +DQ+ HD+ +Q LPV FAIDRAG+VG+DG TH G FD
Sbjct: 376 AGIATEGLKPVFAVYSTFLQRAYDQILHDICIQNLPVVFAIDRAGIVGSDGETHQGIFDL 435
Query: 290 TFMACLPNMVVM 301
++++ LPNM ++
Sbjct: 436 SYLSSLPNMTII 447
>gi|358062417|ref|ZP_09149063.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium hathewayi
WAL-18680]
gi|356699546|gb|EHI61060.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium hathewayi
WAL-18680]
Length = 631
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/351 (39%), Positives = 187/351 (53%), Gaps = 78/351 (22%)
Query: 15 DAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSYEAIN 74
DAF GHSSTSISAGL GMA GRDL G + ++SVI +GA M+YEA+N
Sbjct: 108 DAFNTGHSSTSISAGL----------GMAQGRDLQGDDYTIVSVIGDGALTGGMAYEALN 157
Query: 75 NA----------------------GVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
NA G ++K L + + + L + S+ +K G +
Sbjct: 158 NAARLKKNFIIVLNDNNMSISENVGGMSKYLSSIRTGTGYNDLKKNITSALEKIPVLGEK 217
Query: 113 MHEIDAFSREIEAGSR----ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVL 168
+ ID SR + + FE++GL Y+GPVDGH+++ L VL++ K + AV+
Sbjct: 218 V--IDKISRTKQGIKQLIIPGMLFENMGLVYLGPVDGHDIKQLCKVLQEAKKLDH--AVI 273
Query: 169 IHVITEKEKAMLPLKLQQTRL-----------------------------FCKIL--DNR 197
+HV+T+K K LP + R CK+ D R
Sbjct: 274 VHVLTKKGKGYLPAEKNPARFHGVEPFDIESGKSKSEKMYPSYTDVFSKELCKLAEKDQR 333
Query: 198 -------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR 250
M GTGL F + +P R FDVGIAE+HAVT AAG+AA GLKP A+YSSFLQR
Sbjct: 334 IVAVTAAMPDGTGLKRFGQLYPNRFFDVGIAEEHAVTSAAGMAATGLKPVVAVYSSFLQR 393
Query: 251 CFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
+DQ+ HDV LQ LPV FA+DRAGLVG+DG TH G FD +++ +PNM V+
Sbjct: 394 AYDQIVHDVCLQNLPVVFAVDRAGLVGSDGETHQGIFDLSYLTSIPNMCVL 444
>gi|121634219|ref|YP_974464.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
FAM18]
gi|433495337|ref|ZP_20452398.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM762]
gi|433496058|ref|ZP_20453107.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M7089]
gi|433498025|ref|ZP_20455041.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M7124]
gi|433501525|ref|ZP_20458506.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM174]
gi|166198631|sp|A1KS32.1|DXS_NEIMF RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|120865925|emb|CAM09662.1| putative 1-deoxyxylulose-5-phosphate synthase [Neisseria
meningitidis FAM18]
gi|432227969|gb|ELK83671.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM762]
gi|432233366|gb|ELK88994.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM174]
gi|432236792|gb|ELK92396.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M7124]
gi|432237700|gb|ELK93293.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M7089]
Length = 637
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 151/381 (39%), Positives = 197/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMAV LG N
Sbjct: 91 MHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAVADKQLGNNR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVAKLPKEGAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P+ K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPVAKPTYTQVFGKWLCDRAAADERLIAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCIPNMIV 459
>gi|372490115|ref|YP_005029680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechlorosoma suillum PS]
gi|359356668|gb|AEV27839.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechlorosoma suillum PS]
Length = 618
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 146/354 (41%), Positives = 186/354 (52%), Gaps = 79/354 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D FGVGHSSTSISA L GMA+ G+N +++I +GA A M++
Sbjct: 109 ESAYDTFGVGHSSTSISAAL----------GMALAAKQKGENRKAVAIIGDGAMSAGMAF 158
Query: 71 EAINNAGV----------------------LNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNAGV LNK L RL S L A + +K
Sbjct: 159 EALNNAGVADANMLVILNDNDMSISPPVGALNKYLARLLSG----GLYSAARRAGEKVLG 214
Query: 109 FGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGA 166
+ E+ + E G + FE+LG YIGP+DGH+L+ L L+ +K + P
Sbjct: 215 VAPPLLELAKRAEEHVKGMLTPGTLFEELGFNYIGPIDGHDLDALVPTLQNLKGLKGP-- 272
Query: 167 VLIHVITEKEKAML-----PL---------------------KLQQTRLFCKIL------ 194
+HVIT+K + P+ KL T++F L
Sbjct: 273 QFLHVITKKGQGYKLAEANPVLYHGVSKFQPEVGIQSGKGGGKLTYTQVFSDWLCDMAAA 332
Query: 195 -------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSF 247
MG G+GL F + +P R FDVGIAEQHAVTFAAGLA EGLKP AIYS+F
Sbjct: 333 EPRLVGITPAMGEGSGLVRFAELYPERYFDVGIAEQHAVTFAAGLACEGLKPVVAIYSTF 392
Query: 248 LQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
LQR +DQ+ HDV LQ LPV FAIDR GLVGADG TH GAFD +FM C+PN+V+M
Sbjct: 393 LQRGYDQLVHDVALQNLPVVFAIDRGGLVGADGATHHGAFDLSFMTCIPNLVIM 446
>gi|269837890|ref|YP_003320118.1| deoxyxylulose-5-phosphate synthase [Sphaerobacter thermophilus DSM
20745]
gi|269787153|gb|ACZ39296.1| deoxyxylulose-5-phosphate synthase [Sphaerobacter thermophilus DSM
20745]
Length = 629
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 185/362 (51%), Gaps = 75/362 (20%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TIRQ GL E+ HD FG GH+STSISA L GMAV L G+ H
Sbjct: 90 TIRQPGGLSGFLQREESPHDHFGAGHASTSISAAL----------GMAVAGRLKGERFHT 139
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN----PQFRQLCQEAFSSK 103
++VI +GA M+YEA+NNAG VLN + N P++ +
Sbjct: 140 VAVIGDGALTGGMAYEALNNAGSLQVPLIVVLNDNEMSIAPNVGALPKYLSRIRTDERYT 199
Query: 104 DKKQKFGGQMHEIDAFSREIEAGSR-----------ACFFEDLGLYYIGPVDGHNLEDLA 152
K + +H + +E G R +E+LG Y+GPVDGHNL DL
Sbjct: 200 QAKIEVERLLHRMPQGDWLLELGKRMKDGLKEVVYHTMIWEELGFTYVGPVDGHNLRDLI 259
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLP------------LKL--------QQTRLFCK 192
L+QV+ I P V +H +T K K P +K+ + +F +
Sbjct: 260 ETLQQVREIDGP--VFVHAVTVKGKGYEPAENDPFKHHAASIKIPGAPPSPPKYQDVFGE 317
Query: 193 IL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKP 239
L D R M GTGL F K P R FDVGIAEQHAVTFAAGLA +GL+P
Sbjct: 318 TLTALAREDERIVAITAAMPDGTGLLPFAKEHPKRFFDVGIAEQHAVTFAAGLATQGLRP 377
Query: 240 FCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMV 299
AIYS+FLQR FDQV HDV +QKLPV A+DRAG G DG TH G FD ++ CLPNMV
Sbjct: 378 VAAIYSTFLQRAFDQVVHDVCIQKLPVVLAMDRAGFAGEDGRTHHGLFDIAYLRCLPNMV 437
Query: 300 VM 301
+M
Sbjct: 438 LM 439
>gi|167040178|ref|YP_001663163.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacter sp.
X514]
gi|300914261|ref|ZP_07131577.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter sp. X561]
gi|307724503|ref|YP_003904254.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter sp. X513]
gi|166854418|gb|ABY92827.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter sp. X514]
gi|300889196|gb|EFK84342.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter sp. X561]
gi|307581564|gb|ADN54963.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter sp. X513]
Length = 620
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 200/370 (54%), Gaps = 86/370 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+R+ GL E+VHD FG GHSSTSISA L G+A RDL G+ V
Sbjct: 88 TLRKFNGLSGYTKRTESVHDIFGAGHSSTSISAAL----------GIAKARDLKGEKYSV 137
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKA--------------LKRLHSNPQFR 93
++VI +GA M++EA+NNAG VLN L +L ++P +
Sbjct: 138 VAVIGDGALTGGMAFEALNNAGRSKTDLIVVLNHNEMSISENVGSLSLYLSKLRTDPTYN 197
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+L QE + + G +H+ D+ + + +G FFE++G Y+GP+DGH++
Sbjct: 198 KLKQEVDNLLNIVPPIGKSLHKYIERIKDSVKQLVVSG---MFFEEMGFTYLGPIDGHDV 254
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEK-------------AMLPLKLQQTR------- 188
L VL++ K I P +L+HVIT+K K + P +Q +
Sbjct: 255 GSLIEVLERAKKIKGP--ILVHVITKKGKGYKFAEKFPDKFHSAAPFDIQTGKFVNEGQA 312
Query: 189 ----LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F K L D++ M GTGL F K P R FDVGIAEQHA TFAAG
Sbjct: 313 TYSDVFGKTLTEMALQDDKIVAITAAMPEGTGLIHFAKLIPERFFDVGIAEQHATTFAAG 372
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+A +G KP+ A+YS+FLQR +DQ+ HDV +QKLPV FAIDRAG+VG DG TH G FD ++
Sbjct: 373 MAVQGYKPYFAVYSTFLQRAYDQLIHDVCIQKLPVVFAIDRAGIVGEDGETHQGVFDLSY 432
Query: 292 MACLPNMVVM 301
+ +PN+ +M
Sbjct: 433 LRPIPNITIM 442
>gi|349575615|ref|ZP_08887526.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria shayeganii 871]
gi|348012883|gb|EGY51819.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria shayeganii 871]
Length = 627
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 193/375 (51%), Gaps = 88/375 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D FGVGHSSTSI A L GMAV L G
Sbjct: 91 MHTIRQCGGLAGFPKRAESEYDDFGVGHSSTSIGAAL----------GMAVADRLSGSPR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK------------------ALKRLHSNPQFRQL 95
++VI +GA A ++EA+NNAG ++ AL + ++ R +
Sbjct: 141 RSVAVIGDGAMTAGQAFEALNNAGAMDTDLLVILNDNEMSISPNVGALPKYLASEVVRDM 200
Query: 96 CQEAFSSKDKKQKFGGQM-----------HEIDAFSREIEAGSRACFFEDLGLYYIGPVD 144
S K K +K ++ + I + E++ G + F + GL Y GPVD
Sbjct: 201 RGALRSIKHKSEKVLDKLPGALDIAQRVENRIRSMVDEVQGGQNS-LFNNFGLDYTGPVD 259
Query: 145 GHNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKA 178
GH++ L VL+++K G L+HV+T K K
Sbjct: 260 GHDVRKLVAVLREMKQ--RKGPQLLHVLTRKGQGYPLAENDPVGFHAVGKFNPAEGPSKP 317
Query: 179 MLPLKLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHA 225
P K T++F L ++ M G+GL F++ FP R FDVGIAEQHA
Sbjct: 318 AAPAKPSYTQIFGDWLHDQATADPKLVAITPAMREGSGLVAFEQQFPERYFDVGIAEQHA 377
Query: 226 VTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCG 285
VTFAAGLA EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAG+VGADGPTH G
Sbjct: 378 VTFAAGLACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGIVGADGPTHAG 437
Query: 286 AFDTTFMACLPNMVV 300
A+D +++ C+PNMVV
Sbjct: 438 AYDLSYLRCIPNMVV 452
>gi|385324819|ref|YP_005879258.1| 1-deoxy-D-xylulose-5-phosphate synthase
(1-deoxyxylulose-5-phosphate synthase; DXP synthase;
DXPS) [Neisseria meningitidis 8013]
gi|261393206|emb|CAX50825.1| 1-deoxy-D-xylulose-5-phosphate synthase
(1-deoxyxylulose-5-phosphate synthase; DXP synthase;
DXPS) [Neisseria meningitidis 8013]
Length = 637
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 151/381 (39%), Positives = 197/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMAV LG N
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAVADKQLGNNR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVAKLPKEGAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P+ K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPVAKPTYTQVFGKWLCDRAAADERLIAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCIPNMIV 459
>gi|188586311|ref|YP_001917856.1| 1-deoxy-D-xylulose-5-phosphate synthase [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|229836068|sp|B2A526.1|DXS_NATTJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|179350998|gb|ACB85268.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 631
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 189/372 (50%), Gaps = 88/372 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ GL E+ +DAFG GHSSTSISA L GMA RDL G N V
Sbjct: 91 TLRQFGGLSGFPKPEESRYDAFGTGHSSTSISAAL----------GMAKARDLQGSNEEV 140
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
++VI +GA M++EA+N N G L+ L RL ++P++
Sbjct: 141 LAVIGDGAMTGGMAFEAMNHAGHEQANMTVILNDNEMSIGTNVGALSSYLSRLRTDPKYH 200
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
++ ++ + GG+M + D+ + +G FE+LG YIGP+DGHN+
Sbjct: 201 RIKEDVEFLLKRIPAIGGKMMKSVERVKDSMKYLMVSG---MLFEELGFTYIGPIDGHNI 257
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEK----------------------EKAMLPLKLQQ 186
L VL K G VL+HVIT+K E P K +
Sbjct: 258 PQLMEVLNNAKD--KNGPVLVHVITKKGKGYEPAEKFPDKFHGTGPFEIETGNAPKKAET 315
Query: 187 TRLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+ K+ + M GTGL F + FP R FDVGIAEQHA+TFA
Sbjct: 316 APSYSKVFGDTISEIARKNESVVAITAAMKDGTGLTNFAREFPERFFDVGIAEQHAITFA 375
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA +G KP AIYS+FLQR +DQ+ HDV +Q PV FAIDRAG+VG DG TH G +D
Sbjct: 376 AGLARKGFKPVVAIYSTFLQRAYDQIIHDVCMQDNPVIFAIDRAGIVGGDGETHQGLYDL 435
Query: 290 TFMACLPNMVVM 301
+++ +PN++VM
Sbjct: 436 SYLRSIPNLIVM 447
>gi|410638128|ref|ZP_11348693.1| 1-deoxy-D-xylulose-5-phosphate synthase [Glaciecola lipolytica E3]
gi|410142325|dbj|GAC15898.1| 1-deoxy-D-xylulose-5-phosphate synthase [Glaciecola lipolytica E3]
Length = 620
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/367 (39%), Positives = 196/367 (53%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D F VGHSSTSISA L GMAV + GK+
Sbjct: 95 MTTIRQKEGLHPFPWPLESEYDTFAVGHSSTSISAAL----------GMAVAAEKEGKDR 144
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
V++VI +GA A M++EA+N+ G +NK L + ++ + R L
Sbjct: 145 KVVAVIGDGAMTAGMAFEALNHGGDINKDLLVILNDNEMSISENVGALNSHLARLLTGNF 204
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
F+S +D +K + I F+ E + FE+LG YIGP+DGH+++ +
Sbjct: 205 FNSIRDGGKKLLSNVPPIKEFASRAEEHIKGMVVPGTIFEELGFNYIGPIDGHDVKGVVE 264
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQTRLF------------------ 190
L+ ++ I P ++HV+T+K K P+K F
Sbjct: 265 TLRNMRNIKGPQ--ILHVVTKKGKGFELAEKDPIKFHAVPKFNPSDNGLPKSAPSGPSFS 322
Query: 191 -------CKI--LDNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
C + LD++ M G+G+ F + FP + FDV IAEQH+VTFAAGLA
Sbjct: 323 NVFGDWLCDMAALDSKLMAITPAMREGSGMVKFSQQFPKQYFDVAIAEQHSVTFAAGLAK 382
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
+GL P AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAG+VGADGPTH GAFD FM C
Sbjct: 383 DGLHPVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGIVGADGPTHQGAFDIPFMRC 442
Query: 295 LPNMVVM 301
+PN+V+M
Sbjct: 443 IPNLVIM 449
>gi|390935021|ref|YP_006392526.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570522|gb|AFK86927.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 617
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 197/370 (53%), Gaps = 85/370 (22%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
T+R+ GL E+VHD F GHSSTSISA L G+A RDL +
Sbjct: 87 NTLRKFGGLSGFPKRNESVHDVFETGHSSTSISAAL----------GIAKARDLNNEKYS 136
Query: 55 VISVIVEGATIARMSYEAINNAG--------VLNKA--------------LKRLHSNPQF 92
VISVI +GA M++EA+N+AG +LN L RL ++P +
Sbjct: 137 VISVIGDGALTGGMAFEALNDAGRSKTNLIVILNHNEMSISKNVGSLSLYLSRLRTDPSY 196
Query: 93 RQLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
+L ++ + + G +H+ D+ + I G FFE++G Y+GP+DGH+
Sbjct: 197 FRLKKDLENILNIIPPIGKSIHKSIEKIKDSIKQLIVPG---MFFEEMGFTYLGPIDGHD 253
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ---------------- 186
L+ L VLK+ K + P +LIHVIT+K K + P K
Sbjct: 254 LDSLIDVLKRAKKMNGP--ILIHVITKKGKGYVFAEDNPDKFHSAGIFDIGTGEFKKKAD 311
Query: 187 --TRLFCKIL-----DNR--------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+ +F K L +N+ M GTGLN F + FP R +DVGIAEQHA TFAAG
Sbjct: 312 TYSDVFGKTLTHLAENNKKIVAITAAMPDGTGLNYFAEKFPNRFYDVGIAEQHAATFAAG 371
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+A G KP+ A+YS+FLQR FDQV HD+ +Q LPV A+DRAGLVG DG TH G FD ++
Sbjct: 372 MAVNGYKPYFAVYSTFLQRAFDQVIHDICIQNLPVVLAVDRAGLVGEDGETHQGVFDISY 431
Query: 292 MACLPNMVVM 301
+ +PNM+VM
Sbjct: 432 LRMIPNMIVM 441
>gi|299066177|emb|CBJ37361.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
thiamin-binding [Ralstonia solanacearum CMR15]
Length = 636
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 196/370 (52%), Gaps = 79/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G G+N
Sbjct: 90 MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAAL----------GMALGAKTQGENR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV---------LNKALKRLHS-----NPQFRQLCQEA 99
I+VI +GA A M++EA+NNAGV LN + N F +L
Sbjct: 140 VAIAVIGDGAMSAGMAFEAMNNAGVYRNLPLVVVLNDNDMSISPPVGALNRYFARLMSGQ 199
Query: 100 FSSKDKK--QKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLA 152
F + KK +K + F++ E ++ A FE+ G YIGP+DGH+LE L
Sbjct: 200 FYAATKKGVEKLLSVAPPVLEFAKRFEEHAKGMLVPATMFEEFGFNYIGPIDGHDLESLV 259
Query: 153 YVLKQVK--AIPDPGAVLIHVITEK--------------------------EKAMLPLKL 184
L+ ++ A+ +HV+T+K + A P K+
Sbjct: 260 PTLQNIRQRALEGGRPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPQEGIKPAARPAKV 319
Query: 185 QQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T++F + L D R+ G G+G+ F++ FP R +DVGIAEQHAVTFA G
Sbjct: 320 SYTQVFGQWLCDMAAADKRLVGITPAMREGSGMVEFERRFPDRYYDVGIAEQHAVTFAGG 379
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+D +
Sbjct: 380 LACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAY 439
Query: 292 MACLPNMVVM 301
+ C+PNM+VM
Sbjct: 440 LRCIPNMMVM 449
>gi|390577033|ref|ZP_10257073.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia terrae BS001]
gi|389931011|gb|EIM93099.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia terrae BS001]
Length = 632
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 199/375 (53%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G L G++
Sbjct: 89 MHSLRQLGGISGFPKRDESQYDTFGTAHSSTSISAAL----------GMAIGSKLRGEDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FAIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + + ++ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLRHAPPVLDL---ARKLEEHAKGMIVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIRELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 309
Query: 180 LPLKLQQTRLFCKI------LDNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + LD+R+ G G+G+ F+K FP R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 430 YDLAFLRCIPNMTVM 444
>gi|383317679|ref|YP_005378521.1| 1-deoxy-D-xylulose-5-phosphate synthase [Frateuria aurantia DSM
6220]
gi|379044783|gb|AFC86839.1| 1-deoxy-D-xylulose-5-phosphate synthase [Frateuria aurantia DSM
6220]
Length = 631
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/369 (38%), Positives = 186/369 (50%), Gaps = 82/369 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+ TI++ GL E+ +D FGVGHSSTSISA VGMA+ G +
Sbjct: 94 ITTIKKKDGLTPFPTRSESEYDTFGVGHSSTSISAA----------VGMALAAQRKGDDR 143
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
++++I +GA A M++EA+N N G L K + R S+
Sbjct: 144 KMVAIIGDGAATAGMAFEALNHGGDAEPNVLVVFNDNGMSISENVGALTKFMARATSSAT 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDL 151
L Q+A + K+ G + ++ ++ + S FE+LG +Y GP+DGHN+ L
Sbjct: 204 LNALRQQAKKAISKESAIGRAVSRLEEHAKGMFVPS--ILFEELGFHYTGPIDGHNIPQL 261
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAMLPL--------------------------KLQ 185
L+ VK +P P L+HVIT K K P K
Sbjct: 262 LAALRTVKDLPGPQ--LLHVITAKGKGYAPAENGPIEYHAVSPFDPEAGLAKKAKSGKPT 319
Query: 186 QTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
T +F L D R M G+GL F K +P R FDV IAEQHAVT AAG+
Sbjct: 320 YTDIFSDWLCDMAATDERLMAITPAMREGSGLVRFSKEYPQRYFDVAIAEQHAVTLAAGM 379
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
A EG KP AIYSSFLQR +DQ HDV LQ L V FAIDRAG+VG DG TH G+FD +F+
Sbjct: 380 ACEGAKPVVAIYSSFLQRAYDQAIHDVALQNLDVTFAIDRAGVVGPDGATHAGSFDLSFL 439
Query: 293 ACLPNMVVM 301
CLPNMV+M
Sbjct: 440 RCLPNMVIM 448
>gi|194290325|ref|YP_002006232.1| 1-deoxy-d-xylulose-5-phosphate synthase [Cupriavidus taiwanensis
LMG 19424]
gi|229813270|sp|B3R5H4.1|DXS_CUPTR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|193224160|emb|CAQ70169.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
thiamin-binding [Cupriavidus taiwanensis LMG 19424]
Length = 638
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 195/377 (51%), Gaps = 93/377 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRT+RQ G+ E+ +D FG HSSTSISA L GMA+G LG+
Sbjct: 90 MRTLRQWGGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMALGARTLGQKR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
++VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 140 VSVAVIGDGAMTAGMAFEALNNAGVYKDLPLVVVLNDNDMSISPPVGALNRHLARLLSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K +K + F++ E ++ A FE+ G YIGP+DG
Sbjct: 199 QFYA------ATKKGIEKVLSVAPPVLEFAKRFEEHAKGMMVPATLFEEFGFNYIGPIDG 252
Query: 146 HNLEDLAYVLKQVK--AIPDPGAVLIHVITEK--------------------------EK 177
H+L L L+ ++ A+ G +HV+T+K
Sbjct: 253 HDLNSLVPTLQNIRERALEGGGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPAEGIRP 312
Query: 178 AMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQH 224
A P + T++F L D R+ G G+G+ F+K FP R +DVGIAEQH
Sbjct: 313 AAKPARKTYTQVFGDWLCDMAAADKRLVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQH 372
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 373 AVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHA 432
Query: 285 GAFDTTFMACLPNMVVM 301
GA+D ++ C+PNM+VM
Sbjct: 433 GAYDIAYLRCIPNMMVM 449
>gi|416184811|ref|ZP_11613128.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M13399]
gi|421543117|ref|ZP_15989214.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM255]
gi|433467912|ref|ZP_20425361.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
87255]
gi|325133511|gb|EGC56174.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M13399]
gi|402315323|gb|EJU50887.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM255]
gi|432201464|gb|ELK57545.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
87255]
Length = 637
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 197/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVAKLPKEGAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P+ K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPVAKPTYTQVFGKWLCDRAAADERLIAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCIPNMIV 459
>gi|73540585|ref|YP_295105.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia eutropha JMP134]
gi|118595607|sp|Q474C2.1|DXS_RALEJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|72117998|gb|AAZ60261.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia eutropha JMP134]
Length = 638
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 196/377 (51%), Gaps = 93/377 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G LG+
Sbjct: 90 MNTLRQFGGISGFPRRSESQYDTFGTAHSSTSISAAL----------GMALGARTLGEQR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LNK L RL S
Sbjct: 140 VSIAVIGDGAMTAGMAFEALNNAGVYKDLPLVVVLNDNDMSISPPVGALNKHLARLLSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K +K + F++ E ++ A FE+ G YIGP+DG
Sbjct: 199 QFYA------ATKKGIEKVLSVAPPVLEFAKRFEEHAKGMMVPATLFEEFGFNYIGPIDG 252
Query: 146 HNLEDLAYVLKQVK--AIPDPGAVLIHVITEK--------------------------EK 177
H+L+ L L+ ++ A+ G +HV+T+K
Sbjct: 253 HDLDSLVPTLQNIRKRALEGAGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPAEGIRP 312
Query: 178 AMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQH 224
A P + T++F + L D R+ G G+G+ F+K FP R +DVGIAEQH
Sbjct: 313 AAKPARKTYTQVFGEWLCDMAAADKRLIGITPAMREGSGMVEFEKRFPERYYDVGIAEQH 372
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFA G+A EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 373 AVTFAGGMACEGLKPIVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHA 432
Query: 285 GAFDTTFMACLPNMVVM 301
GA+D ++ C+PNM+VM
Sbjct: 433 GAYDIAYLRCIPNMMVM 449
>gi|333892355|ref|YP_004466230.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas sp. SN2]
gi|332992373|gb|AEF02428.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas sp. SN2]
Length = 625
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 192/367 (52%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D F VGHSSTSISA L GMAV + GKN
Sbjct: 95 MSTIRQKDGLHPFPWPPESDYDTFAVGHSSTSISAAL----------GMAVAAEQEGKNR 144
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
V++VI +GA A M++EA+N+AG +NK + + ++ + R L
Sbjct: 145 KVVAVIGDGAITAGMAFEAMNHAGDINKDMVVVLNDNEMSISENVGALNSHLARLLTGNV 204
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
F+S +D +K + I F+ E + FE+LG YIGP+DGH+++ +
Sbjct: 205 FNSIRDGSKKLLSNVPPIKEFASRAEEHLKGMVVPGTIFEELGFNYIGPIDGHDVDAVVD 264
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQTRLF------------------ 190
L+ ++ P L+HV+T+K K P+K F
Sbjct: 265 TLRNMRKFKGPQ--LLHVVTKKGKGYALAEKDPIKFHAVPKFNPADNALPKAKPSAPTFS 322
Query: 191 -------CKI---------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
C I + M G+G+ F + +P + FDV IAEQHAVTFAAGLA
Sbjct: 323 AIFGDWLCDIAAQDPKLMAVTPAMREGSGMVAFSQQYPDQYFDVAIAEQHAVTFAAGLAK 382
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
+G P AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAG+VGADGPTH GAFD F+ C
Sbjct: 383 DGCNPVVAIYSTFLQRAYDQLIHDVALQDLPVLFAVDRAGIVGADGPTHQGAFDIAFLRC 442
Query: 295 LPNMVVM 301
+PNM+VM
Sbjct: 443 IPNMIVM 449
>gi|254672659|emb|CBA06487.1| 1-deoxy-D-xylulose 5-phosphate synthase [Neisseria meningitidis
alpha275]
Length = 637
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 197/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVAKLPKEGAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P+ K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPVAKPTYTQVFGKWLCDRAAADERLIAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCIPNMIV 459
>gi|225848429|ref|YP_002728592.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225643052|gb|ACN98102.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 632
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 192/371 (51%), Gaps = 86/371 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+T+RQ G+ E+ +D FG GHSSTSISA L GM VG+DL G +
Sbjct: 92 FKTLRQYKGISGFSKIKESKYDHFGTGHSSTSISAAL----------GMRVGKDLKGDES 141
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL-------KRLHSNPQF--------RQLCQE 98
+ I+VI +GA A ++E +NNAG L+ + ++ +P + + ++
Sbjct: 142 YTIAVIGDGAMTAGQAFEGLNNAGWLDPSRFIVILNDNQMSISPNVGAIYTYFNKIITKQ 201
Query: 99 AFSSKDKKQK------FGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGHN 147
F +K K FG Q +I R+IE ++ F FE+LG Y+GP+DGH+
Sbjct: 202 VFQKPRQKLKEAINKIFGDQGVKI---FRKIEEYTKGLFAPGIIFEELGFTYVGPIDGHS 258
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQTRLFCKI--------- 193
L DL L+ VK++ P +LIHVIT+K K P+ F KI
Sbjct: 259 LFDLEQTLENVKSMRGP--ILIHVITQKGKGYKFAEENPVVFHGVSPFDKISGIFNKTST 316
Query: 194 ------------------------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+ M G+GL F K FP R FDVGIAEQHA TFA
Sbjct: 317 APSYSKVFGDALVELAEKDEKIVAITPAMKEGSGLVEFAKRFPNRFFDVGIAEQHAATFA 376
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
GLA EG KP A YS+FLQR +DQV HD+ LQ+LPV FAIDR GLVG DGPTH G FD
Sbjct: 377 GGLALEGFKPVAAYYSTFLQRAYDQVIHDIALQELPVLFAIDRGGLVGDDGPTHHGVFDI 436
Query: 290 TFMACLPNMVV 300
F+ +PN+++
Sbjct: 437 AFLRLVPNIII 447
>gi|254670993|emb|CBA07736.1| 1-deoxy-D-xylulose 5-phosphate synthase [Neisseria meningitidis
alpha153]
Length = 637
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 197/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGPQ--LLHVITKKGNGYKLAENDPVKYHAVAKLPKEGAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P+ K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPVAKPTYTQVFGKWLCDRAAADERLIAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCIPNMIV 459
>gi|421561891|ref|ZP_16007728.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM2657]
gi|433537354|ref|ZP_20493850.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
77221]
gi|402336276|gb|EJU71537.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM2657]
gi|432271777|gb|ELL26899.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
77221]
Length = 637
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 197/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGPQ--LLHVITKKGNGYKLAENDPVKYHAVAKLPKEGAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P+ K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPVAKPTYTQVFGKWLCDRAAADERLIAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCIPNMIV 459
>gi|167037516|ref|YP_001665094.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320115930|ref|YP_004186089.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166856350|gb|ABY94758.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929021|gb|ADV79706.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 620
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 199/370 (53%), Gaps = 86/370 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+R+ GL E+VHD FG GHSSTSISA L G+A RDL G+ V
Sbjct: 88 TLRKFNGLSGYTKRTESVHDIFGAGHSSTSISAAL----------GIAKARDLKGEKYSV 137
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKA--------------LKRLHSNPQFR 93
++VI +GA M++EA+NNAG VLN L +L ++P +
Sbjct: 138 VAVIGDGALTGGMAFEALNNAGRSKTDLIVVLNHNEMSISENVGSLSLYLSKLRTDPTYN 197
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+L QE + + G +H+ D+ + + G FFE++G Y+GP+DGH++
Sbjct: 198 KLKQEVDNLLNIVPPIGKSLHKYIERIKDSVKQLVVPG---MFFEEMGFTYLGPIDGHDV 254
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEK-------------AMLPLKLQQTR------- 188
L VL++ K I P +L+HVIT+K K + P +Q +
Sbjct: 255 GSLIEVLERAKKIKGP--ILVHVITKKGKGYKFAEKFPDKFHSAAPFDIQTGKFVNEGQA 312
Query: 189 ----LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F K L D++ M GTGL F K P R FDVGIAEQHA TFAAG
Sbjct: 313 TYSDVFGKTLTEMALQDDKIVAITAAMPEGTGLIHFAKLIPERFFDVGIAEQHATTFAAG 372
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+A +G KP+ A+YS+FLQR +DQ+ HDV +QKLPV FAIDRAG+VG DG TH G FD ++
Sbjct: 373 MAVQGYKPYFAVYSTFLQRAYDQLIHDVCIQKLPVVFAIDRAGIVGEDGETHQGVFDLSY 432
Query: 292 MACLPNMVVM 301
+ +PN+ +M
Sbjct: 433 LRPIPNITIM 442
>gi|17546940|ref|NP_520342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia solanacearum
GMI1000]
gi|21263512|sp|Q8XX95.1|DXS_RALSO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|17429240|emb|CAD15928.1| probable 1-deoxy-d-xylulose-5-phosphate synthase
(1-deoxyxylulose-5-phosphate synthase) (dxp synthase)
(dxps) protein [Ralstonia solanacearum GMI1000]
Length = 636
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 197/377 (52%), Gaps = 93/377 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G G+N
Sbjct: 90 MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAAL----------GMALGAKTQGENR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 140 VAIAVIGDGAMSAGMAFEAMNNAGVYRNLPLVVVLNDNDMSISPPVGALNRYLARLMSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K +K + F++ E ++ A FE+ G YIGP+DG
Sbjct: 199 QFYA------ATKKGVEKLLSVAPPVLEFAKRFEEHAKGMLVPATMFEEFGFNYIGPIDG 252
Query: 146 HNLEDLAYVLKQVK--AIPDPGAVLIHVITEK--------------------------EK 177
H+LE L L+ ++ A+ +HV+T+K +
Sbjct: 253 HDLESLVPTLQNIRQRALEGGRPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPQEGIKP 312
Query: 178 AMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQH 224
A P K+ T++F + L D R+ G G+G+ F++ FP R +DVGIAEQH
Sbjct: 313 AARPAKVSYTQVFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQH 372
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 373 AVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHA 432
Query: 285 GAFDTTFMACLPNMVVM 301
GA+D ++ C+PNM+VM
Sbjct: 433 GAYDMAYLRCIPNMMVM 449
>gi|416164450|ref|ZP_11607215.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
N1568]
gi|325127524|gb|EGC50450.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
N1568]
Length = 635
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 196/379 (51%), Gaps = 91/379 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-----------------------EKAML 180
DGHN+E+L VLK +++ P L+HVIT+K A +
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVAKLPKESAAQM 318
Query: 181 P------LKLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIA 221
P K T++F K L +R M G+GL F++ FP R FDVGIA
Sbjct: 319 PSENKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIA 378
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGADGP
Sbjct: 379 EQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGP 438
Query: 282 THCGAFDTTFMACLPNMVV 300
TH G +D +F+ C+PNM+V
Sbjct: 439 THAGLYDLSFLRCVPNMIV 457
>gi|421551007|ref|ZP_15997008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
69166]
gi|433472202|ref|ZP_20429580.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
68094]
gi|433478417|ref|ZP_20435726.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
70012]
gi|433526908|ref|ZP_20483530.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
69096]
gi|433539601|ref|ZP_20496068.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
70030]
gi|402329544|gb|EJU64905.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
69166]
gi|432206828|gb|ELK62829.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
68094]
gi|432213311|gb|ELK69233.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
70012]
gi|432258961|gb|ELL14241.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
69096]
gi|432271621|gb|ELL26744.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
70030]
Length = 637
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 197/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVAKLPKEGAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P+ K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPVAKPTYTQVFGKWLCDRAAADERLIAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCIPNMIV 459
>gi|161869348|ref|YP_001598515.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
053442]
gi|189027779|sp|A9M1G3.1|DXS_NEIM0 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|161594901|gb|ABX72561.1| 1-deoxyxylulose-5-phosphate synthase [Neisseria meningitidis
053442]
Length = 635
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 196/379 (51%), Gaps = 91/379 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-----------------------EKAML 180
DGHN+E+L VLK +++ P L+HVIT+K A +
Sbjct: 261 DGHNVENLVDVLKDLRSRKGPQ--LLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 181 P------LKLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIA 221
P K T++F K L +R M G+GL F++ FP R FDVGIA
Sbjct: 319 PSENKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIA 378
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGADGP
Sbjct: 379 EQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGP 438
Query: 282 THCGAFDTTFMACLPNMVV 300
TH G +D +F+ C+PNM+V
Sbjct: 439 THAGLYDLSFLRCIPNMIV 457
>gi|433522936|ref|ZP_20479614.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
61103]
gi|432257088|gb|ELL12394.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
61103]
Length = 637
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 197/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVAKLPKEGAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P+ K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPVAKPTYTQVFGKWLCDRAAADERLIAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCIPNMIV 459
>gi|387127050|ref|YP_006295655.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophaga sp. JAM1]
gi|386274112|gb|AFI84010.1| 1-deoxy-D-xylulose 5-phosphate synthase [Methylophaga sp. JAM1]
Length = 611
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 191/366 (52%), Gaps = 84/366 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+ T+RQ GL E+ +D+FGVGHSSTSISA L GMA+ G +N
Sbjct: 94 LHTMRQPGGLSGFPKRSESNYDSFGVGHSSTSISAAL----------GMAIAARATGSSN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN----------------------KALKRLHSNPQ 91
+++I +GA A +YEA+ +AG LN L RL S
Sbjct: 144 RSVAIIGDGALTAGQAYEALAHAGDLNADMLVVLNDNEMSISKNVGGMANYLARLLSGRF 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGH 146
+R S+++ +K ++ F+R E + FE++G YIGP+DGH
Sbjct: 204 YR-------SARESSKKMLEKIPPAWEFARRTEEHVKGMMVPGTLFEEMGFNYIGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------TR 188
+L+ L L ++ GA +H++T+K K P + Q T+
Sbjct: 257 DLDTLITTLNNLRN--SKGAQFLHIVTKKGKGFKPAEQQPCKYHGVSPANSKKSGPTFTQ 314
Query: 189 LFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAE 235
+F + L M G+GLN F K FP R FDVGIAEQHAVT AAG+A E
Sbjct: 315 VFSQWLCDMGTASEDLIAITPAMCEGSGLNDFAKRFPERYFDVGIAEQHAVTLAAGMACE 374
Query: 236 GLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACL 295
G KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH G+FD +++ C+
Sbjct: 375 GKKPVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGLVGADGATHAGSFDLSYLRCI 434
Query: 296 PNMVVM 301
PNM++M
Sbjct: 435 PNMLIM 440
>gi|421566212|ref|ZP_16011968.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM3081]
gi|402340821|gb|EJU76012.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM3081]
Length = 637
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGPQ--LLHVITKKGNGYKLAENDPVKYHAVAKLPKEGAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPTAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCIPNMIV 459
>gi|421568363|ref|ZP_16014088.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM3001]
gi|402341533|gb|EJU76707.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM3001]
Length = 635
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 196/379 (51%), Gaps = 91/379 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-----------------------EKAML 180
DGHN+E+L VLK +++ P L+HVIT+K A +
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 181 P------LKLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIA 221
P K T++F K L +R M G+GL F++ FP R FDVGIA
Sbjct: 319 PSENKPAAKPTYTQVFGKWLCDRAAADERLIAITPAMREGSGLVEFEQRFPDRYFDVGIA 378
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGADGP
Sbjct: 379 EQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGP 438
Query: 282 THCGAFDTTFMACLPNMVV 300
TH G +D +F+ C+PNM+V
Sbjct: 439 THAGLYDLSFLRCVPNMIV 457
>gi|389799046|ref|ZP_10202051.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodanobacter sp. 116-2]
gi|388443867|gb|EIM00001.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodanobacter sp. 116-2]
Length = 629
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 186/371 (50%), Gaps = 90/371 (24%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ GL E+ +D FGVGHSSTSISA L GMA+ G V
Sbjct: 96 TIKKKDGLAPFPRREESAYDTFGVGHSSTSISAAL----------GMAIAAQRKGDKRKV 145
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
++VI +GA A M++EA+N N G + K + R ++ +
Sbjct: 146 VAVIGDGAMTAGMAFEALNHGGDVEPDMLVVFNDNGMSISENVGAMTKMMARAMASRRLN 205
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS----RACFFEDLGLYYIGPVDGHNLE 149
QL + A + KQ F G+ F R E + FE+LG +Y GP+DGHN+
Sbjct: 206 QLRERAKRAI-PKQSFAGRW-----FKRWEEHAKGMFVPSTLFEELGFHYTGPIDGHNIP 259
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------------------- 186
L L+ VK +P P L+HVIT K K P + Q
Sbjct: 260 QLLQALRTVKNLPGP--QLLHVITTKGKGYAPAEQAQIEYHAVGPFDPEAGVVKKPAPAR 317
Query: 187 ---TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T +F L D R+ G G+GL F K +P R FDV IAEQHAVT AA
Sbjct: 318 PTYTDIFSDWLCDQAAADERLLGITPAMREGSGLVRFSKEYPERYFDVAIAEQHAVTLAA 377
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KP AIYS+FLQR +DQ HDV LQ L V FAIDRAG+VG DG TH G+FD T
Sbjct: 378 GMACEGAKPVVAIYSTFLQRAYDQAIHDVALQNLDVTFAIDRAGVVGPDGATHSGSFDLT 437
Query: 291 FMACLPNMVVM 301
++ CLPNMV+M
Sbjct: 438 YLRCLPNMVIM 448
>gi|389606569|emb|CCA45482.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
alpha522]
Length = 635
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 196/379 (51%), Gaps = 91/379 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-----------------------EKAML 180
DGHN+E+L VLK +++ P L+HVIT+K A +
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 181 P------LKLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIA 221
P K T++F K L +R M G+GL F++ FP R FDVGIA
Sbjct: 319 PSENKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIA 378
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGADGP
Sbjct: 379 EQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGP 438
Query: 282 THCGAFDTTFMACLPNMVV 300
TH G +D +F+ C+PNM+V
Sbjct: 439 THAGLYDLSFLRCVPNMIV 457
>gi|187779514|ref|ZP_02995987.1| hypothetical protein CLOSPO_03110 [Clostridium sporogenes ATCC
15579]
gi|187773139|gb|EDU36941.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium sporogenes
ATCC 15579]
Length = 622
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 199/372 (53%), Gaps = 88/372 (23%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
T+RQ GL E+ +D F GHSSTSISA L GMA RD+ G+NN
Sbjct: 92 NTLRQYGGLSGFPKRCESPYDVFETGHSSTSISAAL----------GMARARDIKGENNK 141
Query: 55 VISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQF 92
VI+VI +GA M++EA+N N G ++ L ++ +P +
Sbjct: 142 VIAVIGDGALTGGMAFEALNDLGFNKTDLIIILNDNQMSIAENVGGMSSYLSKVRLDPTY 201
Query: 93 RQLCQEAFSSKDKKQKFGGQMHEIDAFSRE-IEAGSR-----ACFFEDLGLYYIGPVDGH 146
+L +E ++ +K G M A S E ++ G + FFE+LG+ Y+GP+DGH
Sbjct: 202 NKLKKEVTNTLNKIPNVGKGM----ARSLERVKNGIKQMIVPGMFFENLGIKYLGPIDGH 257
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML-----PLK------------------ 183
++++L+ V+K K I P VLIH IT+K K P K
Sbjct: 258 DIKELSKVMKMAKDIKGP--VLIHAITKKGKGYAYAEKKPDKFHGIGPFDCTSGEVNSKA 315
Query: 184 -LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
L + +F + L D R M GTGL F + FP R FDVGIAEQHAVT A
Sbjct: 316 CLTYSGVFGEELTKIGKEDKRIVAITAAMKDGTGLRKFGETFPKRFFDVGIAEQHAVTLA 375
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AG+A EGLKP A+YS+FLQR +DQV HD+ +Q LPV F IDRAG+VG+DG TH G FD
Sbjct: 376 AGIATEGLKPVFAVYSTFLQRAYDQVLHDICIQNLPVVFGIDRAGIVGSDGETHQGIFDL 435
Query: 290 TFMACLPNMVVM 301
++++ LPNM ++
Sbjct: 436 SYLSSLPNMTII 447
>gi|421563954|ref|ZP_16009766.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM2795]
gi|421906248|ref|ZP_16336150.1| Deoxyxylulose-5-phosphate synthase [Neisseria meningitidis
alpha704]
gi|393292654|emb|CCI72068.1| Deoxyxylulose-5-phosphate synthase [Neisseria meningitidis
alpha704]
gi|402339573|gb|EJU74787.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM2795]
Length = 635
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 196/379 (51%), Gaps = 91/379 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-----------------------EKAML 180
DGHN+E+L VLK +++ P L+HVIT+K A +
Sbjct: 261 DGHNVENLVDVLKDLRSRKGPQ--LLHVITKKGNGYKLAENDPVKYHAVAKLPKESAAQM 318
Query: 181 P------LKLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIA 221
P K T++F K L +R M G+GL F++ FP R FDVGIA
Sbjct: 319 PSENKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIA 378
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGADGP
Sbjct: 379 EQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGP 438
Query: 282 THCGAFDTTFMACLPNMVV 300
TH G +D +F+ C+PNM+V
Sbjct: 439 THAGLYDLSFLRCVPNMIV 457
>gi|385329114|ref|YP_005883417.1| putative 1-deoxyxylulose-5-phosphate synthase [Neisseria
meningitidis alpha710]
gi|308389966|gb|ADO32286.1| putative 1-deoxyxylulose-5-phosphate synthase [Neisseria
meningitidis alpha710]
Length = 635
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 196/379 (51%), Gaps = 91/379 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-----------------------EKAML 180
DGHN+E+L VLK +++ P L+HVIT+K A +
Sbjct: 261 DGHNVENLVDVLKDLRSRKGPQ--LLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 181 P------LKLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIA 221
P K T++F K L +R M G+GL F++ FP R FDVGIA
Sbjct: 319 PSENKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIA 378
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGADGP
Sbjct: 379 EQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGP 438
Query: 282 THCGAFDTTFMACLPNMVV 300
TH G +D +F+ C+PNM+V
Sbjct: 439 THAGLYDLSFLRCVPNMIV 457
>gi|339505914|ref|YP_004716612.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter litoralis Och
149]
gi|338759907|gb|AEI96370.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Roseobacter litoralis
Och 149]
Length = 645
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 184/371 (49%), Gaps = 81/371 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L G V RD+
Sbjct: 93 MPTLRQGGGISGFTKRSESEYDPFGAAHSSTSISAAL----------GFTVSRDMGQPTG 142
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSNPQFRQLCQEAFSSKDK 105
++VI +G+ A M+YEA+NNAG +LN + + S +
Sbjct: 143 DAVAVIGDGSISAGMAYEALNNAGHEGRRMFVILNDNEMSIAPPVGAMSSYLSSLSELSR 202
Query: 106 KQKFGGQMHEIDAF--------------SREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
FGG + + +RE+ G SR FFE+LG YIGP+DGH++E
Sbjct: 203 VGPFGGLVAIAEGMEQLAPKPVRDGARRARELVTGLESRGTFFEELGFDYIGPIDGHDME 262
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VL+ KA G VLIH T K K P +
Sbjct: 263 QLLSVLRGAKARAT-GPVLIHCCTVKGKGYAPAEGSADKYHGVSKFNVGTGVQAKAKANA 321
Query: 184 LQQTRLFCKILDN-------------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T +F L + M GTG++ K FP R FDVGIAEQH VTFAA
Sbjct: 322 PSYTAVFGDALTSLAEEDPSVVAVTAAMPSGTGVDRMAKRFPNRVFDVGIAEQHGVTFAA 381
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
+AA GLKPFCAIYS+FLQR +DQ+ HDV LQ LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 382 AMAATGLKPFCAIYSTFLQRGYDQIVHDVALQGLPVRFAIDRAGLVGADGATHAGSFDIG 441
Query: 291 FMACLPNMVVM 301
++ LP MVVM
Sbjct: 442 YLGALPGMVVM 452
>gi|91776485|ref|YP_546241.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacillus
flagellatus KT]
gi|118595589|sp|Q1GZD7.1|DXS_METFK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|91710472|gb|ABE50400.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacillus
flagellatus KT]
Length = 614
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 134/356 (37%), Positives = 184/356 (51%), Gaps = 84/356 (23%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+++D FG GHSSTSISA L GMAV G + H I+VI +GA A M++
Sbjct: 106 ESIYDTFGTGHSSTSISAAL----------GMAVAAQKTGSDRHSIAVIGDGAMTAGMAF 155
Query: 71 EAINNAGV----------------------LNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNAG L L +L S P + + + +K
Sbjct: 156 EALNNAGAMDANILVILNDNDMSISPNVGALTNYLAKLLSGPLYTTV-------RRSGEK 208
Query: 109 FGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
G + + F++ E + FE+ G YIGP+DGH+++ L L+ ++ +
Sbjct: 209 VLGVVPPVREFAKRAEEHVKGMVTPGTLFEEFGFNYIGPIDGHDIDVLITTLRNIRELKG 268
Query: 164 PGAVLIHVITEKEKAMLPL-------------------------KLQQTRLFCKIL---- 194
P +H+ T+K P K T++F L
Sbjct: 269 P--QFLHIATQKGHGYQPAEDNPGKFHGVGKFDPSNGCSIAQAGKKTYTQVFSDWLVDMA 326
Query: 195 --DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS 245
D R+ G G+GLN F + FP R FDVGIAEQHA+TFAAG+A +GLKP AIYS
Sbjct: 327 ARDERLVGITPAMCDGSGLNAFAEQFPDRFFDVGIAEQHALTFAAGMACDGLKPVVAIYS 386
Query: 246 SFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
+FLQR +DQ HD+ LQ LPV FAIDRAGLVGADGPTH G+FD +++ C+PN+++M
Sbjct: 387 TFLQRAYDQFIHDIALQNLPVMFAIDRAGLVGADGPTHAGSFDLSYLRCIPNIIIM 442
>gi|418289013|ref|ZP_12901411.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM233]
gi|372200497|gb|EHP14565.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM233]
Length = 637
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMELAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADERLIAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCIPNMIV 459
>gi|289548624|ref|YP_003473612.1| deoxyxylulose-5-phosphate synthase [Thermocrinis albus DSM 14484]
gi|289182241|gb|ADC89485.1| deoxyxylulose-5-phosphate synthase [Thermocrinis albus DSM 14484]
Length = 625
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 149/365 (40%), Positives = 190/365 (52%), Gaps = 79/365 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+ +DAFG GHSSTSISA L G V +DL+ K +V
Sbjct: 94 TLRQYGGISGFLRRDESPYDAFGAGHSSTSISAAL----------GFRVAKDLMEKEGYV 143
Query: 56 ISVIVEGATIARMSYEAINNAGVL--NKALKRLHSNPQFRQLCQEAFSS----------- 102
++VI +GA A M++EA+NNAG + NK + L+ N A S+
Sbjct: 144 VAVIGDGAMTAGMAFEALNNAGHIRPNKFIVILNDNEMSISPNVGAISTYLSRIISGSFV 203
Query: 103 KDKKQK-------FGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLEDLAY 153
++ +QK G + + E G S FE+LG YIGPV+GH+L L
Sbjct: 204 QETRQKIKKLLEHLGTPALRVVKLTEEFLKGLISPGVLFEELGFNYIGPVNGHDLVSLER 263
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------LQQTR 188
L+ VKAI P VL+HV T+K K P + T
Sbjct: 264 TLENVKAIEGP--VLLHVYTKKGKGYHPAENDPVTWHGVAPYKRESGEFVKKPSPPTWTS 321
Query: 189 LFCK-------------ILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAE 235
+F K ++ M G+GL F K FP R FDVGIAEQHA TFA GLAAE
Sbjct: 322 VFGKAIVELAEMDPKVVVITPAMKEGSGLVEFAKRFPQRFFDVGIAEQHACTFAGGLAAE 381
Query: 236 GLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACL 295
G+KP YS+FLQR +DQV HD+ LQKL V FAIDRAGLVG DGPTH G FD +++ C+
Sbjct: 382 GMKPVACYYSTFLQRAYDQVIHDIALQKLHVVFAIDRAGLVGDDGPTHHGVFDLSYLRCV 441
Query: 296 PNMVV 300
PNMVV
Sbjct: 442 PNMVV 446
>gi|433474189|ref|ZP_20431543.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
97021]
gi|433486863|ref|ZP_20444052.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
97014]
gi|432207507|gb|ELK63496.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
97021]
gi|432220462|gb|ELK76282.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
97014]
Length = 637
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LG N
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKRLGSNR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMELAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVAKLPKEGAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P+ K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPVAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|418291264|ref|ZP_12903294.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM220]
gi|372200138|gb|EHP14263.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM220]
Length = 635
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 196/379 (51%), Gaps = 91/379 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-----------------------EKAML 180
DGHN+E+L VLK +++ P L+HVIT+K A +
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 181 P------LKLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIA 221
P K T++F K L +R M G+GL F++ FP R FDVGIA
Sbjct: 319 PSENKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIA 378
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGADGP
Sbjct: 379 EQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGP 438
Query: 282 THCGAFDTTFMACLPNMVV 300
TH G +D +F+ C+PNM+V
Sbjct: 439 THAGLYDLSFLRCVPNMIV 457
>gi|385851955|ref|YP_005898470.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M04-240196]
gi|325206778|gb|ADZ02231.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M04-240196]
Length = 637
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMELAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCIPNMIV 459
>gi|352090570|ref|ZP_08954603.1| deoxyxylulose-5-phosphate synthase [Rhodanobacter sp. 2APBS1]
gi|351676083|gb|EHA59238.1| deoxyxylulose-5-phosphate synthase [Rhodanobacter sp. 2APBS1]
Length = 629
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 186/371 (50%), Gaps = 90/371 (24%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ GL E+ +D FGVGHSSTSISA L GMA+ G V
Sbjct: 96 TIKKKDGLAPFPRREESAYDTFGVGHSSTSISAAL----------GMAIAAQRKGDKRKV 145
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
++VI +GA A M++EA+N N G + K + R ++ +
Sbjct: 146 VAVIGDGAMTAGMAFEALNHGGDVEPDMLVVFNDNGMSISENVGAMTKMMARAMASRRLN 205
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS----RACFFEDLGLYYIGPVDGHNLE 149
QL + A + KQ F G+ F R E + FE+LG +Y GP+DGHN+
Sbjct: 206 QLRERAKRAI-PKQSFAGRW-----FKRWEEHAKGMFVPSTLFEELGFHYTGPIDGHNIP 259
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------------------- 186
L L+ VK +P P L+HVIT K K P + Q
Sbjct: 260 QLLQALRTVKNLPGP--QLLHVITTKGKGYAPAEQAQIEYHAVGPFDPEAGVVKKPAPAR 317
Query: 187 ---TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T +F L D R+ G G+GL F K +P R FDV IAEQHAVT AA
Sbjct: 318 PTYTDIFSDWLCDQAAADERLLGITPAMREGSGLVRFSKEYPERYFDVAIAEQHAVTLAA 377
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KP AIYS+FLQR +DQ HDV LQ L V FAIDRAG+VG DG TH G+FD T
Sbjct: 378 GMACEGAKPVVAIYSTFLQRAYDQAIHDVALQNLDVTFAIDRAGVVGPDGATHSGSFDLT 437
Query: 291 FMACLPNMVVM 301
++ CLPNMV+M
Sbjct: 438 YLRCLPNMVIM 448
>gi|416174336|ref|ZP_11609170.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
OX99.30304]
gi|416189075|ref|ZP_11615091.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M0579]
gi|325129522|gb|EGC52349.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
OX99.30304]
gi|325135645|gb|EGC58262.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M0579]
Length = 637
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMELAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCIPNMIV 459
>gi|30249148|ref|NP_841218.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas europaea ATCC
19718]
gi|41016959|sp|Q82VD3.1|DXS_NITEU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|30180467|emb|CAD85072.1| Transketolase [Nitrosomonas europaea ATCC 19718]
Length = 614
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 141/349 (40%), Positives = 188/349 (53%), Gaps = 70/349 (20%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +DAFG HSSTSISA L GMAV L G H I+VI +GA A M++
Sbjct: 106 ESEYDAFGTAHSSTSISAAL----------GMAVAARLKGVKQHAIAVIGDGAMSAGMAF 155
Query: 71 EAINNAGVLNKALKRLHS-------------NPQFRQLCQEAFSSKDKK--QKFGGQMHE 115
EA+NNAGV++ L + + N +L F + ++ +K G +
Sbjct: 156 EALNNAGVMDANLLVILNDNDMSISPPVGALNNYLAKLMSGRFYATARRAGEKMLGVVPP 215
Query: 116 IDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIH 170
+ ++ E + + FE+ G YIGP+DGH+L+ L L +K + P +H
Sbjct: 216 VLELAKRAEEHVKGMVTPSTLFEEFGFNYIGPIDGHDLDILLTTLNNIKQLDGPQ--FLH 273
Query: 171 VITEKEKAML-----PL--------------------KLQQTRLFCKIL------DNRMG 199
V+T K K P+ KL T++F L D+R+
Sbjct: 274 VVTRKGKGYKQAEEDPILYHGVGKFQPDQGIVSKPSAKLAYTQIFGDWLCDMAAKDSRLI 333
Query: 200 G-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCF 252
G G+GL F K +P R FDVGIAEQHAVTFAAG A EGLKP AIYS+FLQR +
Sbjct: 334 GITPAMREGSGLVRFSKEYPDRYFDVGIAEQHAVTFAAGAACEGLKPVVAIYSTFLQRAY 393
Query: 253 DQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DQ+ HDV +Q LPV FAIDRAGLVGADGPTH G+FD +++ C+PN+ VM
Sbjct: 394 DQLIHDVAIQNLPVVFAIDRAGLVGADGPTHAGSFDLSYLRCIPNITVM 442
>gi|148244515|ref|YP_001219209.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Vesicomyosocius
okutanii HA]
gi|146326342|dbj|BAF61485.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Vesicomyosocius
okutanii HA]
Length = 600
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 191/367 (52%), Gaps = 85/367 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ HD+FG GHSSTSISA L G+A+G +
Sbjct: 86 MHTLRQKGGLSGFTKHSESEHDSFGAGHSSTSISAAL----------GIAIGNSINNSKG 135
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
I+VI +GA MS+EA+N N G +NK L RL S
Sbjct: 136 KSIAVIGDGALTGGMSFEALNHAGDSDADLLIILNDNDMSISKNVGAMNKYLTRLISGKV 195
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGH 146
+ + K K F ++ +I F++ E + + FE+LGL Y GP+DGH
Sbjct: 196 YSTM-------KSKSLGFLEKIPQIHKFAKRSEEHLKGMVLPSTLFEELGLDYFGPIDGH 248
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML-----PLKLQ--------------QT 187
+L L LK +K P L+H+IT+K + P K +
Sbjct: 249 DLPTLIQTLKNLKKQTKP--RLLHIITKKGYGLKIAENDPCKFHGVTPASSNTSSFPSYS 306
Query: 188 RLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
+F L+N M G+G++ F+K++P + FDVGIAEQHA+TFA GLA
Sbjct: 307 TVFGTWLNNTALHHKNLVAITPAMCAGSGMSEFEKNYPKQYFDVGIAEQHAITFAGGLAM 366
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
+GLKP AIYS+FLQR +DQ+ HD+ LQ L V FAIDRAGLVGADG TH G+FD +F+ C
Sbjct: 367 QGLKPIVAIYSTFLQRGYDQLIHDIALQNLNVIFAIDRAGLVGADGATHAGSFDLSFLRC 426
Query: 295 LPNMVVM 301
+PN+++M
Sbjct: 427 IPNLIIM 433
>gi|161521356|ref|YP_001584783.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
ATCC 17616]
gi|160345406|gb|ABX18491.1| deoxyxylulose-5-phosphate synthase [Burkholderia multivorans ATCC
17616]
Length = 646
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 196/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 101 MPTLRQLGGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 150
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 151 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 209
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 210 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 263
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 264 HDLDSLIPTLQNIRELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSA 321
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 322 TPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 381
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 382 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 441
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 442 YDLAFMRCIPNMTIM 456
>gi|254253602|ref|ZP_04946919.1| Deoxyxylulose-5-phosphate synthase [Burkholderia dolosa AUO158]
gi|124898247|gb|EAY70090.1| Deoxyxylulose-5-phosphate synthase [Burkholderia dolosa AUO158]
Length = 646
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 196/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 101 MHTLRQFGGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 150
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 151 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 209
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 210 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 263
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 264 HDLDSLIPTLQNIRELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSA 321
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 322 TPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 381
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 382 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 441
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 442 YDLAFMRCIPNMTIM 456
>gi|225174879|ref|ZP_03728876.1| deoxyxylulose-5-phosphate synthase [Dethiobacter alkaliphilus AHT
1]
gi|225169519|gb|EEG78316.1| deoxyxylulose-5-phosphate synthase [Dethiobacter alkaliphilus AHT
1]
Length = 638
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 146/369 (39%), Positives = 195/369 (52%), Gaps = 82/369 (22%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
++RQ GL E+ HD F GHSSTSISA L GMA RDLLG+ +HV
Sbjct: 91 SLRQHGGLSGFPKTSESEHDVFQTGHSSTSISAAL----------GMAQARDLLGEKHHV 140
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKA--------------LKRLHSNPQFR 93
I+VI +G+ M++EA+N+AG +LN L RL ++P++
Sbjct: 141 IAVIGDGSMTGGMAFEALNHAGDTGTDLTVILNDNEMSISQNVGGLAAYLGRLRTDPKYF 200
Query: 94 QLCQEAFSSKDKKQKFGGQ-MHEIDAFSREIEAG-SRACFFEDLGLYYIGPVDGHNLEDL 151
+L ++ + GG+ + +D +++ FE+LG Y+GPV+GH +E L
Sbjct: 201 RLKEDVELIVKRIPHIGGKVLSSVDRVKDAVKSLIVPGMLFEELGFTYLGPVNGHQVEPL 260
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAM--------------------LPLKLQQ----- 186
VL+ K I P VLIHV+T+K K P+ +Q
Sbjct: 261 LGVLRGAKKIKGP--VLIHVLTKKGKGFEEAECKPDVYHGIGPFNPECPPVVSKQNKVPT 318
Query: 187 -TRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
T + K L N M GTGL+ F+K FP R FDVGIAEQHAVTFAAGL
Sbjct: 319 YTEIVSKTLVNAAKKNDKVVAITAAMASGTGLDCFEKEFPSRFFDVGIAEQHAVTFAAGL 378
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
A G P AIYS+FLQR +DQV HDV +Q LPV FA+DRAG+VG DG TH G FD +++
Sbjct: 379 AKRGFHPVAAIYSTFLQRAYDQVLHDVCIQNLPVLFALDRAGIVGEDGETHNGLFDLSYL 438
Query: 293 ACLPNMVVM 301
+PNM V+
Sbjct: 439 RHMPNMAVI 447
>gi|397623997|gb|EJK67229.1| hypothetical protein THAOC_11764 [Thalassiosira oceanica]
Length = 752
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 194/380 (51%), Gaps = 92/380 (24%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKN-NH 54
T+RQ G+ E+ +D+FG GHSSTSISA GM+V + LL K N+
Sbjct: 143 TLRQLDGMSGFCKRKESEYDSFGAGHSSTSISAAQ----------GMSVAKSLLQKRRNN 192
Query: 55 VISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQ--FRQLCQEAFSSKDKKQ---- 107
I+VI +GA M+YEA+N+AG L ++ + L+ N Q Q A K Q
Sbjct: 193 CIAVIGDGAITGGMAYEAMNSAGYLTSRMIVVLNDNGQVSLPTGTQSAGGVKPASQLSAY 252
Query: 108 --------------KFGGQMHE------------IDAFSREIEAGSRACFFEDLGLYYIG 141
F +++ ID ++R + G FE+LG +Y+G
Sbjct: 253 TSNLLVSKPFQDFRDFAKSLNKLFPENVQDVNKRIDEYARGVVTG--GTLFEELGFFYVG 310
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL------------ 189
P+DGH+LE++ +L++++ VL+H+ T K P R+
Sbjct: 311 PIDGHDLENMVPILEKLRDSDSNKPVLLHLKTTKGYGYEPALKASDRMHGVGKFDIKTGI 370
Query: 190 ----------FCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAE 222
F I N M GGTG+++F + FP R FDVGIAE
Sbjct: 371 QFKGKAAAPSFTSIFANALIDAATEHREIVGITAAMPGGTGMDIFGRRFPKRTFDVGIAE 430
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGLKPFC IYS+F+QR +DQV HDV +Q LPVR +DRAG+VG DGPT
Sbjct: 431 QHAVTFAAGMACEGLKPFCCIYSTFMQRGYDQVVHDVAIQNLPVRMILDRAGVVGNDGPT 490
Query: 283 HCGAFDTTFMACLPNMVVMK 302
H G +D +M C+PN+ +M
Sbjct: 491 HHGCYDLAYMGCIPNLTIMS 510
>gi|134292966|ref|YP_001116702.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia vietnamiensis
G4]
gi|134136123|gb|ABO57237.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia vietnamiensis
G4]
Length = 646
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 196/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 101 MHTLRQYDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 150
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 151 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 209
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 210 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 263
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 264 HDLDSLIPTLQNIRELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSA 321
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 322 TPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 381
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 382 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 441
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 442 YDLAFMRCIPNMTIM 456
>gi|433482612|ref|ZP_20439867.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
2006087]
gi|433484619|ref|ZP_20441838.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
2002038]
gi|432214632|gb|ELK70529.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
2006087]
gi|432219705|gb|ELK75541.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
2002038]
Length = 637
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGPQ--LLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|313200382|ref|YP_004039040.1| deoxyxylulose-5-phosphate synthase [Methylovorus sp. MP688]
gi|312439698|gb|ADQ83804.1| deoxyxylulose-5-phosphate synthase [Methylovorus sp. MP688]
Length = 613
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 185/349 (53%), Gaps = 70/349 (20%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D FG GHSSTSISA L GMA+ G +++I +GA A M++
Sbjct: 106 ESPYDTFGTGHSSTSISAAL----------GMAIAAQQQGSERRAVAIIGDGAMTAGMAF 155
Query: 71 EAINNAGVLNKAL------KRLHSNPQ-------FRQLCQEAF--SSKDKKQKFGGQMHE 115
EA+NNAG ++ L + +P +L F S + +K G +
Sbjct: 156 EALNNAGAMDANLLVILNDNDMSISPNVGALHNYLAKLLSGRFYASMRRSGEKVLGVVPP 215
Query: 116 IDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIH 170
+ F++ E + FE+ G YIGP+DGH++E L LK ++ + P +H
Sbjct: 216 MLEFAKRAEEHVKGMVTPGTLFEEFGFNYIGPIDGHDIETLITTLKNIRKLKGP--QFLH 273
Query: 171 VITEKEKAMLPL-------------------------KLQQTRLFCKIL------DNRMG 199
++T+K P K T++F L D R+
Sbjct: 274 IVTQKGHGYAPAEDNPGKYHGVGKFDPSNGCSVATSSKKTYTQVFSDWLVDMAEQDERLI 333
Query: 200 G-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCF 252
G G+GLN F + FP R FDVGIAEQHA+TFAAG+A +G+KP AIYS+FLQR +
Sbjct: 334 GITPAMCDGSGLNAFAEKFPKRFFDVGIAEQHALTFAAGMACDGMKPVVAIYSTFLQRAY 393
Query: 253 DQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DQ+ HD+ LQ LPV FAIDRAGLVGADGPTH G+FD +FM C+PNM+++
Sbjct: 394 DQLIHDIALQNLPVVFAIDRAGLVGADGPTHAGSFDLSFMRCIPNMLIL 442
>gi|421538836|ref|ZP_15985008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
93003]
gi|402315543|gb|EJU51106.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
93003]
Length = 637
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMELAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCIPNMIV 459
>gi|253998308|ref|YP_003050371.1| deoxyxylulose-5-phosphate synthase [Methylovorus glucosetrophus
SIP3-4]
gi|253984987|gb|ACT49844.1| deoxyxylulose-5-phosphate synthase [Methylovorus glucosetrophus
SIP3-4]
Length = 613
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 185/349 (53%), Gaps = 70/349 (20%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D FG GHSSTSISA L GMA+ G +++I +GA A M++
Sbjct: 106 ESPYDTFGTGHSSTSISAAL----------GMAIAAQQQGSERRAVAIIGDGAMTAGMAF 155
Query: 71 EAINNAGVLNKAL------KRLHSNPQ-------FRQLCQEAF--SSKDKKQKFGGQMHE 115
EA+NNAG ++ L + +P +L F S + +K G +
Sbjct: 156 EALNNAGAMDANLLVILNDNDMSISPNVGALHNYLAKLLSGRFYASMRRSGEKVLGVVPP 215
Query: 116 IDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIH 170
+ F++ E + FE+ G YIGP+DGH++E L LK ++ + P +H
Sbjct: 216 MLEFAKRAEEHVKGMVTPGTLFEEFGFNYIGPIDGHDIETLITTLKNIRKLKGP--QFLH 273
Query: 171 VITEKEKAMLPL-------------------------KLQQTRLFCKIL------DNRMG 199
++T+K P K T++F L D R+
Sbjct: 274 IVTQKGHGYAPAEDNPGKYHGVGKFDPSNGCSVATSSKKTYTQVFSDWLVDMAEQDERLI 333
Query: 200 G-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCF 252
G G+GLN F + FP R FDVGIAEQHA+TFAAG+A +G+KP AIYS+FLQR +
Sbjct: 334 GITPAMCDGSGLNAFAEKFPKRFFDVGIAEQHALTFAAGMACDGMKPVVAIYSTFLQRAY 393
Query: 253 DQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DQ+ HD+ LQ LPV FAIDRAGLVGADGPTH G+FD +FM C+PNM+++
Sbjct: 394 DQLIHDIALQNLPVVFAIDRAGLVGADGPTHAGSFDLSFMRCIPNMLIL 442
>gi|421541165|ref|ZP_15987295.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
93004]
gi|402315958|gb|EJU51512.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
93004]
Length = 635
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 150/379 (39%), Positives = 196/379 (51%), Gaps = 91/379 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEK---------------AMLP------- 181
DGHN+E+L VLK +++ P L+HVIT+K A LP
Sbjct: 261 DGHNVENLVDVLKDLRSRKGPQ--LLHVITKKGNGYKLAENDPVKYHAVAKLPKEGAAQM 318
Query: 182 -------LKLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIA 221
K T++F K L +R M G+GL F++ FP R FDVGIA
Sbjct: 319 PSENKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIA 378
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGADGP
Sbjct: 379 EQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGP 438
Query: 282 THCGAFDTTFMACLPNMVV 300
TH G +D +F+ C+PNM+V
Sbjct: 439 THAGLYDLSFLRCVPNMIV 457
>gi|22294344|dbj|BAC08174.1| 1-deoxy-xylulose 5-phosphate synthase [Thermosynechococcus
elongatus BP-1]
Length = 655
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 189/374 (50%), Gaps = 88/374 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+ D FG GH+STSISA L GMA+ RDL G+N V
Sbjct: 106 TLRQKGGIAGYLNRRESPFDHFGAGHASTSISAAL----------GMAIARDLKGENFKV 155
Query: 56 ISVIVEGATIARMSYEAINNAG---------VLN--------------KALKRLHSNPQF 92
+++I +GA M+ EAIN+AG VLN + L ++ +PQ
Sbjct: 156 VAIIGDGALTGGMALEAINHAGHLPHTNLMVVLNDNEMSISPNVGAIPRYLNKIRLSPQV 215
Query: 93 RQLCQEAFSSKDKKQKFGGQ-----MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
Q + + K F G+ M + + + FE+LG Y+GPVDGHN
Sbjct: 216 -QFITDNLEEQFKHIPFFGENLTPEMQRLKEGMKRLAVPKVGAVFEELGFTYVGPVDGHN 274
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEK-------------AMLPLKLQQTR------ 188
LE+L + IP P VL+HV T K K A P L +
Sbjct: 275 LEELIATFQHAHTIPGP--VLVHVATVKGKGYAIAEKDQVGYHAQNPFDLVTGKAKPSSK 332
Query: 189 ------------LFCKILDN---------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
K+ +N M GTGL++ QK P + DVGIAEQHAVT
Sbjct: 333 PKPPSYSKVFGETLTKLAENDPRIVGITAAMATGTGLDILQKRVPKQYIDVGIAEQHAVT 392
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
AAG+A +G++P AIYS+FLQR +DQ+ HDV +QKLPV F +DRAG+VGADGPTH G +
Sbjct: 393 MAAGMATQGMRPVAAIYSTFLQRAYDQIVHDVCIQKLPVFFCMDRAGIVGADGPTHQGMY 452
Query: 288 DTTFMACLPNMVVM 301
D ++ CLPNMV+M
Sbjct: 453 DIAYLRCLPNMVLM 466
>gi|416214623|ref|ZP_11622987.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M01-240013]
gi|421555586|ref|ZP_16001513.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
98008]
gi|325143761|gb|EGC66078.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M01-240013]
gi|402329046|gb|EJU64408.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
98008]
Length = 637
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVAKLPKEGAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|414154706|ref|ZP_11411023.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411453537|emb|CCO08927.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 637
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 194/371 (52%), Gaps = 88/371 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
++RQ G+ E++HDAF GHSSTS+SA L GMA+ RDL G V
Sbjct: 91 SLRQYGGISGFPKPAESIHDAFATGHSSTSVSAAL----------GMALARDLNGATYDV 140
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
++VI +G+ M++EA+N N G L+ L RL ++P++
Sbjct: 141 VAVIGDGSLTGGMAFEAMNHAGHLKTNVIVVLNDNEMSIAPNVGALSGYLSRLRTDPKYS 200
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+ ++ + +K G ++ ++ D+ + G FE+LG Y+GPVDGH++
Sbjct: 201 K-SKDEIAELLQKLPHGNKLLKVVDRLKDSLKYLVVPG---MLFEELGFTYLGPVDGHDI 256
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
+ + +L+Q K++ P VL+HV+T K K P +
Sbjct: 257 KAVMTLLQQAKSVNGP--VLVHVLTRKGKGYWPAEENPDRFHGVGPFDVATGRVKKAGGA 314
Query: 187 ---TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T +F + L D++ M GTGL F + FP R FDVGIAEQHAVT AA
Sbjct: 315 PSYTEVFGQTLVKLARQDSKIIGITAAMPSGTGLQDFAREFPRRYFDVGIAEQHAVTMAA 374
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA G +P AIYS+FLQR +DQV HDV LQ LPV FA+DR GLVG DGPTH G FD
Sbjct: 375 GLATAGYRPVAAIYSTFLQRAYDQVLHDVCLQNLPVTFALDRGGLVGDDGPTHHGVFDIA 434
Query: 291 FMACLPNMVVM 301
++ +PNMV+M
Sbjct: 435 YLRHIPNMVIM 445
>gi|416995850|ref|ZP_11939109.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. TJI49]
gi|325518121|gb|EGC97907.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. TJI49]
Length = 634
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 195/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MPTLRQLGGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIRELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSA 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 430 YDLAFMRCIPNMTIM 444
>gi|421557859|ref|ZP_16003756.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
80179]
gi|402333578|gb|EJU68880.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
80179]
Length = 637
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGPQ--LLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|161485769|ref|NP_681412.2| 1-deoxy-D-xylulose-5-phosphate synthase [Thermosynechococcus
elongatus BP-1]
gi|30315822|sp|Q8DL74.2|DXS_THEEB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
Length = 638
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 189/374 (50%), Gaps = 88/374 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+ D FG GH+STSISA L GMA+ RDL G+N V
Sbjct: 89 TLRQKGGIAGYLNRRESPFDHFGAGHASTSISAAL----------GMAIARDLKGENFKV 138
Query: 56 ISVIVEGATIARMSYEAINNAG---------VLN--------------KALKRLHSNPQF 92
+++I +GA M+ EAIN+AG VLN + L ++ +PQ
Sbjct: 139 VAIIGDGALTGGMALEAINHAGHLPHTNLMVVLNDNEMSISPNVGAIPRYLNKIRLSPQV 198
Query: 93 RQLCQEAFSSKDKKQKFGGQ-----MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
Q + + K F G+ M + + + FE+LG Y+GPVDGHN
Sbjct: 199 -QFITDNLEEQFKHIPFFGENLTPEMQRLKEGMKRLAVPKVGAVFEELGFTYVGPVDGHN 257
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEK-------------AMLPLKLQQTR------ 188
LE+L + IP P VL+HV T K K A P L +
Sbjct: 258 LEELIATFQHAHTIPGP--VLVHVATVKGKGYAIAEKDQVGYHAQNPFDLVTGKAKPSSK 315
Query: 189 ------------LFCKILDN---------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
K+ +N M GTGL++ QK P + DVGIAEQHAVT
Sbjct: 316 PKPPSYSKVFGETLTKLAENDPRIVGITAAMATGTGLDILQKRVPKQYIDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
AAG+A +G++P AIYS+FLQR +DQ+ HDV +QKLPV F +DRAG+VGADGPTH G +
Sbjct: 376 MAAGMATQGMRPVAAIYSTFLQRAYDQIVHDVCIQKLPVFFCMDRAGIVGADGPTHQGMY 435
Query: 288 DTTFMACLPNMVVM 301
D ++ CLPNMV+M
Sbjct: 436 DIAYLRCLPNMVLM 449
>gi|283797527|ref|ZP_06346680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium sp. M62/1]
gi|291074896|gb|EFE12260.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium sp. M62/1]
Length = 631
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 197/370 (53%), Gaps = 87/370 (23%)
Query: 4 IRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVI 56
+RQ GL E+ DAF GHSSTSISAGL GMA+GRD+ G+N VI
Sbjct: 90 LRQYGGLSGFPKRKESPFDAFDTGHSSTSISAGL----------GMALGRDVRGENYSVI 139
Query: 57 SVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQFRQ 94
SVI +GA M+YEA+NNA G +++ L L ++ + +
Sbjct: 140 SVIGDGALTGGMAYEALNNAAQIKKNFIIVLNDNNMSISKNVGGISRYLSNLRADEGYNE 199
Query: 95 LCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGHNLE 149
L + ++ G M + +R + G + F FE++G+ YIGPVDGH++
Sbjct: 200 LKKSVVAALRSIPMVGNGM--VQTLTR-TKNGIKQLFIPGMWFENMGVTYIGPVDGHDVR 256
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------------------- 186
L + ++ K + AVLIHV+T+K K P +
Sbjct: 257 QLVKIFREAKKMDR--AVLIHVLTKKGKGYQPAEKNPSAFHGVEPFNPDTGKPLATKIYP 314
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F K + D+R M GGTGL+ F+K + R FDVGIAE+HAVT AAG
Sbjct: 315 TYTDVFSKTICQIAAEDSRVAAVTAAMPGGTGLSRFEKLYLDRFFDVGIAEEHAVTSAAG 374
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+AA GLKP A+YSSFLQR +DQ+ HDV +Q LPV F +DRAGLVG+DG TH G FD +F
Sbjct: 375 MAAAGLKPVVAVYSSFLQRAYDQILHDVCIQNLPVLFCVDRAGLVGSDGETHQGIFDLSF 434
Query: 292 MACLPNMVVM 301
++ +PNM VM
Sbjct: 435 LSSIPNMSVM 444
>gi|385341288|ref|YP_005895159.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M01-240149]
gi|385856585|ref|YP_005903097.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NZ-05/33]
gi|325201494|gb|ADY96948.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M01-240149]
gi|325207474|gb|ADZ02926.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NZ-05/33]
Length = 637
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCIPNMIV 459
>gi|15677702|ref|NP_274863.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
MC58]
gi|385853920|ref|YP_005900434.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
H44/76]
gi|416198804|ref|ZP_11619171.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
CU385]
gi|427826505|ref|ZP_18993555.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
H44/76]
gi|433465846|ref|ZP_20423316.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM422]
gi|433489041|ref|ZP_20446190.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M13255]
gi|433491219|ref|ZP_20448331.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM418]
gi|433505736|ref|ZP_20462667.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
9506]
gi|433507856|ref|ZP_20464752.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
9757]
gi|433509985|ref|ZP_20466842.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
12888]
gi|433512083|ref|ZP_20468897.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
4119]
gi|13124129|sp|Q9JXV7.1|DXS_NEIMB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|7227124|gb|AAF42201.1| 1-deoxyxylulose-5-phosphate synthase [Neisseria meningitidis MC58]
gi|316985479|gb|EFV64426.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
H44/76]
gi|325139526|gb|EGC62066.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
CU385]
gi|325200924|gb|ADY96379.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
H44/76]
gi|432200543|gb|ELK56633.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM422]
gi|432221037|gb|ELK76852.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M13255]
gi|432225353|gb|ELK81096.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM418]
gi|432239066|gb|ELK94625.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
9757]
gi|432239221|gb|ELK94779.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
9506]
gi|432244923|gb|ELL00402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
12888]
gi|432245240|gb|ELL00711.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
4119]
Length = 637
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGPQ--LLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|339443487|ref|YP_004709492.1| hypothetical protein CXIVA_24230 [Clostridium sp. SY8519]
gi|338902888|dbj|BAK48390.1| hypothetical protein CXIVA_24230 [Clostridium sp. SY8519]
Length = 621
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 195/369 (52%), Gaps = 84/369 (22%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E++ D+F GHSST+ISAG +GMA R++LG+N V
Sbjct: 90 TLRQYGGMSGFPKRSESICDSFDTGHSSTAISAG----------IGMAEAREILGENYKV 139
Query: 56 ISVIVEGATIARMSYEAINNAGVLNK-------------------------ALKRLHSNP 90
+SVI +GA +++E +NNA L+ +L+
Sbjct: 140 VSVIGDGAFTGGLAFEGLNNATALHSNFIIVLNDNQMSISPNVGGFSNHLASLRTADGYK 199
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+F+ ++ +MH+ +++ FE++G+ Y+GP+DGHNL D
Sbjct: 200 EFKSGVHSKLEKLPYGERVARRMHKAKNSLKQLLI--PGMLFENMGITYLGPIDGHNLAD 257
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPL------------------KLQQ------ 186
L ++L + K I P VL+HV+T+K K P KL++
Sbjct: 258 LVHILTEAKRIQGP--VLVHVMTKKGKGYFPAEQHPDKFHGVGPFDAETGKLKKKKNNPD 315
Query: 187 -TRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
T +F ++ N M GTGLN F+++FP R FDVGIAE H VTFAAGL
Sbjct: 316 YTEVFSTVITNMARKNDRIVAITAAMADGTGLNRFRQNFPNRFFDVGIAEGHGVTFAAGL 375
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
AA G++P A+YSSFLQR FD++ DV LQKLPV FAIDRAGLVGADG TH G FD +++
Sbjct: 376 AAAGMRPVFAVYSSFLQRGFDELIEDVCLQKLPVLFAIDRAGLVGADGDTHQGIFDLSYL 435
Query: 293 ACLPNMVVM 301
+PN++VM
Sbjct: 436 NLVPNLMVM 444
>gi|433469995|ref|ZP_20427402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
98080]
gi|432201225|gb|ELK57308.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
98080]
Length = 637
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|424836172|ref|ZP_18260829.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium sporogenes PA
3679]
gi|365977574|gb|EHN13673.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium sporogenes PA
3679]
Length = 622
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 199/371 (53%), Gaps = 88/371 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ GL E+ +D F GHSSTSISA L GMA RD+ G+NN V
Sbjct: 93 TLRQYGGLSGFPKRCESPYDVFETGHSSTSISAAL----------GMARARDIKGENNKV 142
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
I+VI +GA M++EA+N N G ++ L ++ +P +
Sbjct: 143 IAVIGDGALTGGMAFEALNDLGFNKTDLIIILNDNQMSIAENVGGMSSYLSKVRLDPTYN 202
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSRE-IEAGSR-----ACFFEDLGLYYIGPVDGHN 147
+L +E ++ +K G M A S E ++ G + FFE+LG+ Y+GP+DGH+
Sbjct: 203 KLKKEVNNTLNKIPNVGKGM----ARSLERVKNGIKQMIVPGMFFENLGIKYLGPIDGHD 258
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML-----PLK------------------- 183
+++L+ V+K K I P VLIH IT+K K P K
Sbjct: 259 IKELSKVMKMAKDIKGP--VLIHAITKKGKGYAYAEKKPDKFHGIGPFDCTSGEVNSKAC 316
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L + +F + L D R M GTGL F + FP R FDVGIAEQHAVT AA
Sbjct: 317 LTYSGVFGEELTKIGKEDKRVVAITAAMKDGTGLRKFGETFPKRFFDVGIAEQHAVTLAA 376
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EGLKP A+YS+FLQR +DQV HD+ +Q LPV F IDRAG+VG+DG TH G FD +
Sbjct: 377 GIATEGLKPVFAVYSTFLQRAYDQVLHDICIQNLPVVFGIDRAGIVGSDGETHQGIFDLS 436
Query: 291 FMACLPNMVVM 301
+++ LPNM ++
Sbjct: 437 YLSSLPNMTII 447
>gi|344167297|emb|CCA79505.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
thiamin-binding [blood disease bacterium R229]
Length = 636
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 146/377 (38%), Positives = 196/377 (51%), Gaps = 93/377 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G G+N
Sbjct: 90 MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAAL----------GMALGAKTQGENR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 140 VAIAVIGDGAMSAGMAFEAMNNAGVYRNLPLVVVLNDNDMSISPPVGALNRYLARLMSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K +K + F++ E ++ A FE+ G YIGP+DG
Sbjct: 199 QFYA------ATKKGVEKLLSVAPPVLEFAKRFEEHAKGMLVPATMFEEFGFNYIGPIDG 252
Query: 146 HNLEDLAYVLKQVK--AIPDPGAVLIHVITEK--------------------------EK 177
H+LE L L+ ++ A+ +HV+T+K +
Sbjct: 253 HDLESLVPTLQNIRQRALEGGRPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPQEGIKP 312
Query: 178 AMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQH 224
A P K+ T++F + L D R+ G G+G+ F++ FP R +DVGIAEQH
Sbjct: 313 AARPSKISYTQVFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQH 372
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
A TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 373 AATFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHA 432
Query: 285 GAFDTTFMACLPNMVVM 301
GA+D ++ C+PNM+VM
Sbjct: 433 GAYDMAYLRCIPNMMVM 449
>gi|300690861|ref|YP_003751856.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia solanacearum
PSI07]
gi|299077921|emb|CBJ50560.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
thiamin-binding [Ralstonia solanacearum PSI07]
Length = 636
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 146/377 (38%), Positives = 196/377 (51%), Gaps = 93/377 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G G+N
Sbjct: 90 MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAAL----------GMALGAKTQGENR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 140 VAIAVIGDGAMSAGMAFEAMNNAGVYRNLPLVVVLNDNDMSISPPVGALNRYLARLMSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K +K + F++ E ++ A FE+ G YIGP+DG
Sbjct: 199 QFYA------ATKKGVEKLLSVAPPVLEFAKRFEEHAKGMLVPATMFEEFGFNYIGPIDG 252
Query: 146 HNLEDLAYVLKQVK--AIPDPGAVLIHVITEK--------------------------EK 177
H+LE L L+ ++ A+ +HV+T+K +
Sbjct: 253 HDLESLVPTLQNIRQRALEGGRPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPQEGIKP 312
Query: 178 AMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQH 224
A P K+ T++F + L D R+ G G+G+ F++ FP R +DVGIAEQH
Sbjct: 313 AARPSKISYTQVFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQH 372
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
A TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 373 AATFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHA 432
Query: 285 GAFDTTFMACLPNMVVM 301
GA+D ++ C+PNM+VM
Sbjct: 433 GAYDMAYLRCIPNMMVM 449
>gi|344171952|emb|CCA84578.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
thiamin-binding [Ralstonia syzygii R24]
Length = 636
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 146/377 (38%), Positives = 196/377 (51%), Gaps = 93/377 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G G+N
Sbjct: 90 MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAAL----------GMALGAKTQGENR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 140 VAIAVIGDGAMSAGMAFEAMNNAGVYRNLPLVVVLNDNDMSISPPVGALNRYLARLMSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K +K + F++ E ++ A FE+ G YIGP+DG
Sbjct: 199 QFYA------ATKKGVEKLLSVAPPVLEFAKRFEEHAKGMLVPATMFEEFGFNYIGPIDG 252
Query: 146 HNLEDLAYVLKQVK--AIPDPGAVLIHVITEK--------------------------EK 177
H+LE L L+ ++ A+ +HV+T+K +
Sbjct: 253 HDLESLVPTLQNIRQRALEGGRPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPQEGIKP 312
Query: 178 AMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQH 224
A P K+ T++F + L D R+ G G+G+ F++ FP R +DVGIAEQH
Sbjct: 313 AARPSKISYTQVFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPNRYYDVGIAEQH 372
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
A TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 373 AATFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHA 432
Query: 285 GAFDTTFMACLPNMVVM 301
GA+D ++ C+PNM+VM
Sbjct: 433 GAYDMAYLRCIPNMMVM 449
>gi|387886594|ref|YP_006316893.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella noatunensis
subsp. orientalis str. Toba 04]
gi|386871410|gb|AFJ43417.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella noatunensis
subsp. orientalis str. Toba 04]
Length = 618
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 198/363 (54%), Gaps = 76/363 (20%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ G+ E+ +D FGVGHSSTSISA L GMA+ L GK+++
Sbjct: 93 TIKKDGGISGFPNRSESEYDTFGVGHSSTSISAAL----------GMAIADRLQGKHSNS 142
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF-- 100
I+VI +GA M++EA+N+AG +LN + N F ++ F
Sbjct: 143 IAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSAHFSKIISGGFYN 202
Query: 101 SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVL 155
S ++K ++ + + F ++IE ++ A FFEDLG YY+GP+DGHN+ +L L
Sbjct: 203 SIREKGKEVLKNIPPMFEFVKKIETQTKGMFVPANFFEDLGFYYVGPIDGHNVVELVKTL 262
Query: 156 KQVKAIPDPGAVLIHVITEKEKAML-----PLK-------------------LQQTRLFC 191
+ +K G L+HVIT+K K P+K L + +F
Sbjct: 263 RILK--DHRGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGDAQSKASRLTYSNIFG 320
Query: 192 KIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLK 238
+ D R+ G G+ L F + +P R FDV IAEQHAVTFA GLA +GLK
Sbjct: 321 NWICQKAAKDERLVGVTPAMKEGSDLIRFSQQYPNRYFDVAIAEQHAVTFAGGLACQGLK 380
Query: 239 PFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNM 298
P AIYS+FLQR +DQV HD+ LQ L V +A+DRAGLVGADG TH G+FD +FM C+PN
Sbjct: 381 PIVAIYSTFLQRAYDQVIHDIALQDLDVLYAVDRAGLVGADGATHDGSFDISFMRCIPNH 440
Query: 299 VVM 301
V+M
Sbjct: 441 VIM 443
>gi|221197058|ref|ZP_03570105.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
CGD2M]
gi|221203730|ref|ZP_03576748.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
CGD2]
gi|221212348|ref|ZP_03585325.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
CGD1]
gi|421468344|ref|ZP_15916896.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
ATCC BAA-247]
gi|421476964|ref|ZP_15924817.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
CF2]
gi|221167447|gb|EED99916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
CGD1]
gi|221175896|gb|EEE08325.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
CGD2]
gi|221183612|gb|EEE16012.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
CGD2M]
gi|400227279|gb|EJO57286.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
CF2]
gi|400232199|gb|EJO61835.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
ATCC BAA-247]
Length = 634
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 196/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MPTLRQLGGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIRELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSA 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 430 YDLAFMRCIPNMTIM 444
>gi|387904758|ref|YP_006335096.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. KJ006]
gi|387579650|gb|AFJ88365.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia sp. KJ006]
Length = 634
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 196/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MHTLRQYDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIRELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSA 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 430 YDLAFMRCIPNMTIM 444
>gi|189352477|ref|YP_001948104.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
ATCC 17616]
gi|189336499|dbj|BAG45568.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
ATCC 17616]
Length = 634
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 196/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MPTLRQLGGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIRELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSA 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 430 YDLAFMRCIPNMTIM 444
>gi|440781960|ref|ZP_20960188.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium pasteurianum
DSM 525]
gi|440220678|gb|ELP59885.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium pasteurianum
DSM 525]
Length = 620
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 140/355 (39%), Positives = 187/355 (52%), Gaps = 80/355 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ D F GHSSTSISAGL G++ RDL G N V+SVI +GA M+Y
Sbjct: 106 ESYFDIFDTGHSSTSISAGL----------GISRARDLNGDNYEVVSVIGDGALTGGMAY 155
Query: 71 EAIN----------------------NAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+N N G ++K L ++ +P + + QE ++ K
Sbjct: 156 EALNDLGYSKTKMIIILNDNQMSISKNVGGMSKYLNKIRIDPAYNKFKQEVNNTLRKTNI 215
Query: 109 FGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
G + + ++I+ G + F FED+G+ Y+GP+DGHN+ +L VL K I
Sbjct: 216 GVGVANSL----QKIKDGFKQLFIPGMLFEDMGIKYLGPIDGHNINELVQVLNLAKNIKG 271
Query: 164 PGAVLIHVITEKEKAM-----LPLK-------------------LQQTRLFCKILDN--- 196
P VL+H+IT K K P K L +++F K + N
Sbjct: 272 P--VLVHIITRKGKGYDFAEKNPNKFHGIGPFDCDSGEICSIKGLTYSKVFGKEMINLAK 329
Query: 197 ----------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSS 246
M GTGLN F + FP R FDVGIAEQHAVT AG+A +G+KP A+YS+
Sbjct: 330 ENKKIVAVTAAMPDGTGLNNFAEKFPKRFFDVGIAEQHAVTLCAGMATQGIKPVFAVYST 389
Query: 247 FLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
FLQR +DQV HDV +QKLPV FAIDRAG+VG DG TH G FD +++ +PNM VM
Sbjct: 390 FLQRAYDQVLHDVCIQKLPVIFAIDRAGIVGEDGETHQGIFDLSYLTQMPNMTVM 444
>gi|377813360|ref|YP_005042609.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. YI23]
gi|357938164|gb|AET91722.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. YI23]
Length = 638
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 196/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +RQ G+ E+ +D FG HSSTSISA L GMA+ L G N
Sbjct: 89 MPGLRQLGGISGFPRRTESEYDTFGTAHSSTSISAAL----------GMAIANKLQGDNR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVADDVPLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + + ++ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLRHAPPVLDL---ARKLEEHAKGMIVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + A
Sbjct: 252 HDLDSLIPTLQNIKELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAA 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K FP R FDVGIAEQHAV
Sbjct: 310 TPSKKTYTQVFGEWLCDAAALDSRVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLAA+G+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH G
Sbjct: 370 TFAGGLAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGN 429
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 430 YDLAFLRCIPNMTVM 444
>gi|239627501|ref|ZP_04670532.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517647|gb|EEQ57513.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 621
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 143/369 (38%), Positives = 192/369 (52%), Gaps = 85/369 (23%)
Query: 4 IRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVI 56
+RQ GL E+ +D+F GHSSTSISAGL G+A+GRDL G + V+
Sbjct: 90 LRQYGGLSGFPKRKESPYDSFDTGHSSTSISAGL----------GIALGRDLKGLDYKVV 139
Query: 57 SVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQFRQ 94
SVI +GA M+YEA+NNA G +++ L L + +
Sbjct: 140 SVIGDGALTGGMAYEALNNAARMKRNFIIVLNDNKMSISENVGGMSRYLNGLRTGSGYND 199
Query: 95 LCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR----ACFFEDLGLYYIGPVDGHNLED 150
L + + D+ G M ID R + + FE++G+ Y+GPVDGHN+
Sbjct: 200 LKKNVADALDRIPVVGSVM--IDKIKRTKNSIKQLFIPGMLFENMGITYLGPVDGHNIPA 257
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLP---------------------LKLQQ--- 186
+ V ++ + + +VL+HVIT+K K P L QQ
Sbjct: 258 MCKVFREAQKLDH--SVLVHVITKKGKGYRPAEKNPSQFHGVGPFDVETGKPLSKQQYPS 315
Query: 187 -----TRLFCKI---------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
+R C++ + M GTGL F K FP R FDVGIAE HAVT AAG+
Sbjct: 316 YTDVFSRKICQLGEQYPNLVAVTAAMPDGTGLTAFGKKFPYRFFDVGIAEAHAVTSAAGM 375
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
AA GL+P A+YSSFLQR FDQ+ HDV +Q LPV FA+DRAGLVG+DG TH G FD +++
Sbjct: 376 AAAGLRPVVAVYSSFLQRGFDQILHDVCIQNLPVLFAVDRAGLVGSDGETHQGIFDYSYL 435
Query: 293 ACLPNMVVM 301
C+PNM VM
Sbjct: 436 TCIPNMSVM 444
>gi|268598197|ref|ZP_06132364.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
MS11]
gi|268683495|ref|ZP_06150357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
SK-92-679]
gi|268582328|gb|EEZ47004.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
MS11]
gi|268623779|gb|EEZ56179.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
SK-92-679]
Length = 637
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGGDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKEGGAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|357051955|ref|ZP_09113073.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium
clostridioforme 2_1_49FAA]
gi|355387223|gb|EHG34249.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium
clostridioforme 2_1_49FAA]
Length = 638
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/369 (38%), Positives = 193/369 (52%), Gaps = 85/369 (23%)
Query: 4 IRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVI 56
+RQ GL E+ +D+F GHSSTSISAGL G+A+GRD+ G++ V+
Sbjct: 90 LRQYGGLSGFPKRKESPYDSFDTGHSSTSISAGL----------GIALGRDIRGEDYRVV 139
Query: 57 SVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQFRQ 94
SVI +GA M+YEA+NNA G +++ L L + +
Sbjct: 140 SVIGDGALTGGMAYEALNNAARMKKNFIIVLNDNKMSISENVGGMSRYLNGLRTGSGYND 199
Query: 95 LCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR----ACFFEDLGLYYIGPVDGHNLED 150
L + + D+ G M ID R + + FE++G+ Y+GPVDGHN++
Sbjct: 200 LKKSVADALDRIPVVGTAM--IDKIKRTKNSIKQLFIPGMLFENMGITYLGPVDGHNIQA 257
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLP---------------------LKLQQ--- 186
L VL++ + + AVL+HV+T+K K P L Q
Sbjct: 258 LCKVLREAQKLDH--AVLVHVMTKKGKGYRPAEKNPSYFHGVGPFDIKTGKSLSAQTNPS 315
Query: 187 -----TRLFCKILDNR---------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
+R C++ + M GTGL F K FP R FDVGIAE HAVT AAG+
Sbjct: 316 YTDVFSRKLCQLGEEHPELVAVTAAMPDGTGLAAFGKKFPDRFFDVGIAEAHAVTSAAGM 375
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
AA GL+P A+YSSFLQR +DQV HDV +Q LPV FA+DRAGLVG+DG TH G FD +F+
Sbjct: 376 AAAGLRPVVAVYSSFLQRAYDQVLHDVCIQNLPVLFAVDRAGLVGSDGETHQGIFDYSFL 435
Query: 293 ACLPNMVVM 301
+PNM VM
Sbjct: 436 TSIPNMSVM 444
>gi|404497671|ref|YP_006721777.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens
GS-15]
gi|418067360|ref|ZP_12704705.1| deoxyxylulose-5-phosphate synthase [Geobacter metallireducens RCH3]
gi|118595485|sp|Q39RT4.1|DXS2_GEOMG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
synthase 2; Short=DXPS 2
gi|78195273|gb|ABB33040.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens
GS-15]
gi|373558965|gb|EHP85282.1| deoxyxylulose-5-phosphate synthase [Geobacter metallireducens RCH3]
Length = 635
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/354 (40%), Positives = 179/354 (50%), Gaps = 75/354 (21%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ HDAFG GHSSTSISAGL GMA +DL G + I+VI +G+ M+Y
Sbjct: 106 ESPHDAFGAGHSSTSISAGL----------GMAAAQDLKGSGSRAIAVIGDGSLTGGMAY 155
Query: 71 EAINNAGVLNKAL-KRLHSNPQFRQLCQEAFSS-----------KDKKQKFGGQMHEIDA 118
EA+N AG L K L L+ N AFSS + K++ G + I A
Sbjct: 156 EALNQAGHLKKNLIVVLNDNEMSISQNVGAFSSFVSRKMTGSDFRKLKKEMQGLLENIPA 215
Query: 119 FSREIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGA 166
++I +R FE LG YIGP+ GH+L L V + VK + P
Sbjct: 216 IGKDILHFARRAENSLKGFLTPGMLFEALGFDYIGPIPGHDLPQLLEVFENVKGLEGP-- 273
Query: 167 VLIHVITEKEKAMLP---------------------------------------LKLQQT 187
VL+HV+T K K P +KL +
Sbjct: 274 VLVHVMTTKGKGYQPAEENPAAFHGVGPFDVATGKTTGGKPGAASYTGVFGATLVKLAEE 333
Query: 188 RLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSF 247
+ M GTGL F K FP R FDVGIAEQHA+TFAAGLAA+G +P AIYS+F
Sbjct: 334 DEKIIAITAAMPDGTGLTPFAKRFPERFFDVGIAEQHALTFAAGLAADGFRPVTAIYSTF 393
Query: 248 LQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
LQR +DQV HDV LQKLPV A+DR GLVG DGPTH G FD +++ LP M +M
Sbjct: 394 LQRAYDQVFHDVCLQKLPVTMALDRGGLVGDDGPTHHGTFDLSYLRHLPEMTLM 447
>gi|404496791|ref|YP_006720897.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens
GS-15]
gi|418065258|ref|ZP_12702632.1| deoxyxylulose-5-phosphate synthase [Geobacter metallireducens RCH3]
gi|118595481|sp|Q39UB1.1|DXS1_GEOMG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
synthase 1; Short=DXPS 1
gi|78194396|gb|ABB32163.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens
GS-15]
gi|373562436|gb|EHP88647.1| deoxyxylulose-5-phosphate synthase [Geobacter metallireducens RCH3]
Length = 625
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 151/368 (41%), Positives = 193/368 (52%), Gaps = 79/368 (21%)
Query: 1 MRTIRQTCGL----ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVI 56
+RT+ G E+ HDAF GH+STSISA L G AV RDL G+ N V+
Sbjct: 92 LRTLGGISGFPKRCESSHDAFDTGHTSTSISAAL----------GFAVARDLRGERNKVV 141
Query: 57 SVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEAFSS 102
+VI +G+ ++YE +NNAG LNK L + ++ + R + E +
Sbjct: 142 AVIGDGSMTGGLAYEGLNNAGHLNKDLVVVLNDNEMSIAENVGALSNFLNRTVTSEFVHT 201
Query: 103 --KDKKQKFGGQ---MHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGHNLEDLA 152
KD + GG H + ++ E + F FE G YIGP+DGH+ L
Sbjct: 202 MKKDLEGFLGGLDRIGHGVLKVAKRAEESLKGLFTPGMLFEAFGFEYIGPIDGHDTARLM 261
Query: 153 YVLKQVKAIPDPGAVLIHVITEK--------EKAML-----PLKLQQ------------- 186
++VK D AVLIHV+T+K EK L P +L+
Sbjct: 262 ETFEKVKRFDD--AVLIHVLTKKGRGYPPAEEKPALFHGVGPFELETGKVIKGKGGAASY 319
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + + D R M GTGL F +P R FDVGIAEQH VTFAAGLA
Sbjct: 320 TGVFGEAIRKIAAEDERVIALTAAMPDGTGLTPFAADYPTRFFDVGIAEQHGVTFAAGLA 379
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG +P A+YSSFLQR +DQV HDV LQ LPV FAIDRAG+VG+DGPTH G FD ++
Sbjct: 380 AEGYRPVFAVYSSFLQRAYDQVFHDVCLQNLPVTFAIDRAGVVGSDGPTHHGLFDLAYLR 439
Query: 294 CLPNMVVM 301
LPNMVVM
Sbjct: 440 HLPNMVVM 447
>gi|268685801|ref|ZP_06152663.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
SK-93-1035]
gi|268626085|gb|EEZ58485.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
SK-93-1035]
Length = 637
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGGDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKEGGAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|240013350|ref|ZP_04720263.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
DGI18]
gi|240015795|ref|ZP_04722335.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
FA6140]
gi|240120423|ref|ZP_04733385.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
PID24-1]
gi|254492945|ref|ZP_05106116.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
1291]
gi|268596072|ref|ZP_06130239.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
FA19]
gi|268602775|ref|ZP_06136942.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
PID1]
gi|268681324|ref|ZP_06148186.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
PID332]
gi|291044657|ref|ZP_06570366.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
DGI2]
gi|226511985|gb|EEH61330.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
1291]
gi|268549860|gb|EEZ44879.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
FA19]
gi|268586906|gb|EEZ51582.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
PID1]
gi|268621608|gb|EEZ54008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
PID332]
gi|291011551|gb|EFE03547.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
DGI2]
Length = 637
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGGDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKEGGAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|160938273|ref|ZP_02085628.1| hypothetical protein CLOBOL_03169 [Clostridium bolteae ATCC
BAA-613]
gi|158438646|gb|EDP16403.1| hypothetical protein CLOBOL_03169 [Clostridium bolteae ATCC
BAA-613]
Length = 624
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/369 (38%), Positives = 191/369 (51%), Gaps = 85/369 (23%)
Query: 4 IRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVI 56
+RQ GL E+ +D+F GHSSTSISAGL G+A+GRD+ G++ V+
Sbjct: 90 LRQYGGLSGFPKRKESPYDSFDTGHSSTSISAGL----------GIALGRDIRGEDYRVV 139
Query: 57 SVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQFRQ 94
SVI +GA M+YEA+NNA G +++ L L + +
Sbjct: 140 SVIGDGALTGGMAYEALNNAARMKKNFIIVLNDNKMSISENVGGMSRYLNGLRTGSGYND 199
Query: 95 LCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR----ACFFEDLGLYYIGPVDGHNLED 150
L + + D+ G M ID R + + FE++G+ Y+GPVDGHN++
Sbjct: 200 LKKSVADALDRIPVVGTAM--IDKIKRTKNSIKQLFIPGMLFENMGITYLGPVDGHNIQA 257
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLP---------------------LKLQQTRL 189
L VL++ + + AVL+HV+T+K K P L Q+
Sbjct: 258 LCKVLREAQKLDH--AVLVHVMTKKGKGYRPAEKNPSYFHGVGPFDIKTGQSLSSQKNPS 315
Query: 190 FCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
+ + + M GTGL F K FP R FDVGIAE HAVT AAG+
Sbjct: 316 YTDVFSRKLCQLGQEHPELVAVTAAMPDGTGLAAFGKKFPDRFFDVGIAEAHAVTSAAGM 375
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
AA GL+P A+YSSFLQR +DQV HDV +Q LPV FA+DRAGLVG+DG TH G FD +F+
Sbjct: 376 AAAGLRPVVAVYSSFLQRAYDQVLHDVCIQNLPVLFAVDRAGLVGSDGETHQGIFDYSFL 435
Query: 293 ACLPNMVVM 301
+PNM VM
Sbjct: 436 TSIPNMSVM 444
>gi|293397765|ref|ZP_06641971.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae F62]
gi|291611711|gb|EFF40780.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae F62]
Length = 637
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGGDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKEGGAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|167583905|ref|ZP_02376293.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia ubonensis Bu]
Length = 634
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 196/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MHSLRQLDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIKELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSA 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDR+GLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRSGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM VM
Sbjct: 430 YDLAFMRCIPNMTVM 444
>gi|304388408|ref|ZP_07370515.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
ATCC 13091]
gi|304337589|gb|EFM03751.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
ATCC 13091]
Length = 635
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 148/379 (39%), Positives = 195/379 (51%), Gaps = 91/379 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GM LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMGAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-----------------------EKAML 180
DGHN+E+L VLK +++ P L+HVIT+K A +
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 181 P------LKLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIA 221
P K T++F K L +R M G+GL F++ FP R FDVGIA
Sbjct: 319 PSENKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIA 378
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGADGP
Sbjct: 379 EQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGP 438
Query: 282 THCGAFDTTFMACLPNMVV 300
TH G +D +F+ C+PNM+V
Sbjct: 439 THAGLYDLSFLRCVPNMIV 457
>gi|59800505|ref|YP_207217.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae FA
1090]
gi|268600542|ref|ZP_06134709.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
PID18]
gi|75432621|sp|Q5FAI2.1|DXS_NEIG1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|59717400|gb|AAW88805.1| putative 1-deoxyxylulose-5-phosphate synthase [Neisseria
gonorrhoeae FA 1090]
gi|268584673|gb|EEZ49349.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
PID18]
Length = 637
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGGDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKEGGAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|363898221|ref|ZP_09324756.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oribacterium sp. ACB7]
gi|361956588|gb|EHL09903.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oribacterium sp. ACB7]
Length = 555
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 190/356 (53%), Gaps = 80/356 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D F GHSSTSISA L G+A GRDLLG++ V++VI +GA M+Y
Sbjct: 35 ESPYDCFNTGHSSTSISAAL----------GIAEGRDLLGEDYTVLAVIGDGALTGGMAY 84
Query: 71 EAINNA----------------------GVLNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNA G ++ L + S+ + + + SS K
Sbjct: 85 EALNNASKMKKNFIIILNDNEMSIAKNVGGMSTYLNGIRSHKGYTRFKENLASSLGKIPV 144
Query: 109 FGGQMHE-----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
G ++ E ++ + + G FE++GL Y+GPVDGHNL L V+ + K I
Sbjct: 145 VGDRIVERLKNTKNSIKQLLVPG---MLFENMGLTYLGPVDGHNLHALEQVIHEAKRIDH 201
Query: 164 PGAVLIHVITEKEKAMLPL-------------------------KLQQTRLFCKIL---- 194
AVL+HV+T+K K +P K T +F + L
Sbjct: 202 --AVLVHVVTKKGKGYVPAEQNPSVFHGVGPFDIATGKSKQENGKKSYTDIFAESLIKEG 259
Query: 195 --DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS 245
D++ M GTGL F+K FP R FDVGIAE HAVT AAGLA+ GLKP A+YS
Sbjct: 260 KEDSKIVAITAAMPDGTGLTKFEKAFPKRFFDVGIAEAHAVTSAAGLASAGLKPVFAVYS 319
Query: 246 SFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
SFLQR +DQ+ HDV LQKLPV FAIDRAGLVGADG TH G FD +++ +PNM VM
Sbjct: 320 SFLQRAYDQIVHDVCLQKLPVVFAIDRAGLVGADGETHQGIFDISYLRSIPNMTVM 375
>gi|220909494|ref|YP_002484805.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanothece sp. PCC 7425]
gi|254782069|sp|B8HWL8.1|DXS_CYAP4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|219866105|gb|ACL46444.1| deoxyxylulose-5-phosphate synthase [Cyanothece sp. PCC 7425]
Length = 632
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 185/372 (49%), Gaps = 86/372 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+ D FG GH+STSISA L GMA+ RD G+ + V
Sbjct: 89 TLRQKDGVAGYLNRKESEFDHFGAGHASTSISAAL----------GMALARDQRGETHKV 138
Query: 56 ISVIVEGATIARMSYEAIN-----------------------NAGVLNKALKRLHSNPQF 92
+++I +GA MS EAIN N G L++ L ++ NPQ
Sbjct: 139 VAIIGDGALTGGMSLEAINHAGHLPHTNLMVVLNDNEMSISPNVGALSRYLNKMRLNPQV 198
Query: 93 RQLCQEAFSSKDKK---QKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
Q E + K ++ + + + FE+LG Y+GPVDGHNLE
Sbjct: 199 -QFITENLEEQIKHFVGDSITPELGRLKGGMKRLAVPKVGAVFEELGFTYVGPVDGHNLE 257
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEK-------------AMLPLKLQQ---------- 186
+L IP P VL+HV T K K A P L
Sbjct: 258 ELIATFNAAHKIPGP--VLVHVATVKGKGYAIAEKDQVGYHAQNPFNLATGKAMPSSKPK 315
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+++F L D+R M GTGL++ QKH P + DVGIAEQHAVT A
Sbjct: 316 PPSYSKVFGDTLTKLAEADSRIIGITAAMATGTGLDILQKHLPDQYIDVGIAEQHAVTMA 375
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EG++P IYS+FLQR +DQ+ HDV +Q LPV F +DRAG+VGADGPTH G +D
Sbjct: 376 AGLACEGMRPVVTIYSTFLQRAYDQIVHDVCIQSLPVLFCMDRAGIVGADGPTHQGMYDI 435
Query: 290 TFMACLPNMVVM 301
++ CLPNMV+M
Sbjct: 436 AYLRCLPNMVLM 447
>gi|297616624|ref|YP_003701783.1| deoxyxylulose-5-phosphate synthase [Syntrophothermus lipocalidus
DSM 12680]
gi|297144461|gb|ADI01218.1| deoxyxylulose-5-phosphate synthase [Syntrophothermus lipocalidus
DSM 12680]
Length = 637
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 193/372 (51%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+ T+R+ GL E+++D F GHSSTSISA L GMA+ RDL +
Sbjct: 89 IHTLRRFKGLSGFPKVEESIYDVFNTGHSSTSISAAL----------GMALARDLQRERF 138
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
+++VI +GA M++EA+N N G L+ L L S+P
Sbjct: 139 RIVAVIGDGALTGGMAFEALNHAGHQGCDLTVVLNDNEMSISRNVGALSTYLSNLRSDPA 198
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGH 146
+ + E S + G + + D+ I G FE+LG YIGP+DGH
Sbjct: 199 YFRRKAEIESWVQRIPGIGPNIVRVAEKLKDSLKYLIVPG---MLFEELGFTYIGPIDGH 255
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEK----EKAM-----------------LPLK-- 183
NL+DL VL + + P VLIHVIT+K E A+ LPLK
Sbjct: 256 NLQDLITVLGKTGGMKGP--VLIHVITQKGRGYEPALAKPDEFHGIGPFNVDTGLPLKPA 313
Query: 184 -LQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+ T++F + R M GTGL+ F + FP R FDVGI EQHAVT A
Sbjct: 314 SVTYTQVFGDFMVQRASQDPRVVAITAAMTSGTGLSDFARRFPDRFFDVGICEQHAVTLA 373
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AG+A GL+P AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVG DGPTH G FD
Sbjct: 374 AGMARMGLRPVVAIYSTFLQRAYDQIVHDVCLQNLPVVFAVDRAGLVGEDGPTHHGVFDL 433
Query: 290 TFMACLPNMVVM 301
+++ +PN+VVM
Sbjct: 434 SYLRHVPNLVVM 445
>gi|421545186|ref|ZP_15991250.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM140]
gi|421547234|ref|ZP_15993272.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM183]
gi|421548206|ref|ZP_15994234.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM2781]
gi|421553439|ref|ZP_15999401.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM576]
gi|402321263|gb|EJU56738.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM140]
gi|402321597|gb|EJU57070.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM183]
gi|402326928|gb|EJU62326.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM2781]
gi|402328116|gb|EJU63496.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM576]
Length = 635
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 148/379 (39%), Positives = 195/379 (51%), Gaps = 91/379 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-----------------------EKAML 180
DGHN+E+L VL+ ++ P L+HVIT+K A +
Sbjct: 261 DGHNVENLVDVLEDLRGRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 181 P------LKLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIA 221
P K T++F K L +R M G+GL F++ FP R FDVGIA
Sbjct: 319 PSENKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIA 378
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGADGP
Sbjct: 379 EQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGP 438
Query: 282 THCGAFDTTFMACLPNMVV 300
TH G +D +F+ C+PNM+V
Sbjct: 439 THAGLYDLSFLRCVPNMIV 457
>gi|254877030|ref|ZP_05249740.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254843051|gb|EET21465.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 618
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 196/363 (53%), Gaps = 76/363 (20%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ G+ E+ +D FGVGHSSTSISA L GMA+ L GK++
Sbjct: 93 TIKKDGGISGFPKRSESEYDTFGVGHSSTSISAAL----------GMAIADRLQGKHSSS 142
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF-- 100
I+VI +GA M++EA+N+AG +LN + N F ++ F
Sbjct: 143 IAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSAHFSKIISGGFYN 202
Query: 101 SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVL 155
S ++K ++ + + F ++IE ++ A FFEDLG YY+GP+DGHN+ +L L
Sbjct: 203 SIREKGKEVLKNIPPMFEFVKKIETQTKGMFVPANFFEDLGFYYVGPIDGHNVVELVKTL 262
Query: 156 KQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ-------------------TRLFC 191
+ +K G L+HVIT+K K P+K + +F
Sbjct: 263 RILK--DHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGDAQSKASKPTYSNIFG 320
Query: 192 KIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLK 238
+ D R+ G G+ L F + +P R FDV IAEQHAVTFA GLA +GLK
Sbjct: 321 NWICQKAAKDERLVGVTPAMKEGSDLIRFSQQYPNRYFDVAIAEQHAVTFAGGLACQGLK 380
Query: 239 PFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNM 298
P AIYS+FLQR +DQV HDV LQ L + +A+DRAGLVGADG TH G+FD +FM C+PN
Sbjct: 381 PVVAIYSTFLQRAYDQVIHDVALQDLDILYAVDRAGLVGADGATHDGSFDISFMRCIPNH 440
Query: 299 VVM 301
V+M
Sbjct: 441 VIM 443
>gi|312795724|ref|YP_004028646.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia rhizoxinica
HKI 454]
gi|312167499|emb|CBW74502.1| 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) [Burkholderia
rhizoxinica HKI 454]
Length = 648
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/374 (39%), Positives = 196/374 (52%), Gaps = 92/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ L G++
Sbjct: 100 MSTLRQLGGISGFPRRCESEYDTFGTAHSSTSISAAL----------GMAIASQLKGEDR 149
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
+ I+VI +GA A ++EA+NNAGV LN+ L RL S
Sbjct: 150 YAIAVIGDGAMTAGEAFEALNNAGVCEDIPLLVILNDNDMSISPPVGALNRYLARLMSG- 208
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A ++ + M E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 209 ---KFYATAKKGVERVLRHAPPMLEL---ARKLEEHAKGMVTPATLFEEFGFNYIGPIDG 262
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKE-------------------------KAML 180
H+L+ L L+ ++ + P +HV+T+K K
Sbjct: 263 HDLDALIPTLQNIRGLRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAA 320
Query: 181 PLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVT 227
K T++F + L D R+ G G+GL F++ FP R FDVGIAEQHAVT
Sbjct: 321 SSKKTYTQVFGEWLCDAAELDPRVVGITPAMREGSGLVEFEQRFPQRYFDVGIAEQHAVT 380
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FA GLAAEGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+
Sbjct: 381 FAGGLAAEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 440
Query: 288 DTTFMACLPNMVVM 301
D ++ C+PNMVVM
Sbjct: 441 DMAYLRCIPNMVVM 454
>gi|260220842|emb|CBA28812.1| 1-deoxy-D-xylulose-5-phosphate synthase [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 631
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 189/370 (51%), Gaps = 86/370 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ GL E+ +D FG HSSTSISA L GMA+ + G++
Sbjct: 96 MDSLRQFGGLSGFPRRDESEYDTFGTAHSSTSISAAL----------GMALASRIKGEDR 145
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
+ ++VI +GA A M++EA+NNAGV LN+ L +L S
Sbjct: 146 YSVAVIGDGAMTAGMAFEALNNAGVEDCRLLVILNDNDMSISPPVGALNRYLAQLMSG-- 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS--RACFFEDLGLYYIGPVDGHNLE 149
Q A S K + E+ E G A FE G YIGP+DGH+L+
Sbjct: 204 --QFYAAAKSVGKSVLKGAPPLFELAKRLEEQAKGMVVPATLFEKFGFNYIGPIDGHDLD 261
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKE--------------------------KAMLPLK 183
L L+ +K + P +HV+T+K K+ P K
Sbjct: 262 SLIPTLENIKQLKGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLVKSTTPAK 319
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T++F + L D R+ G G+G+ F+K FP R FDVGIAEQHAVTFA
Sbjct: 320 TTFTQVFGQWLCDMAAADERLVGITPAMREGSGMVEFEKRFPQRYFDVGIAEQHAVTFAG 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+D
Sbjct: 380 GLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIP 439
Query: 291 FMACLPNMVV 300
F+ C+PNM V
Sbjct: 440 FLRCIPNMSV 449
>gi|206562766|ref|YP_002233529.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
J2315]
gi|444361874|ref|ZP_21162452.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
BC7]
gi|444372696|ref|ZP_21172129.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
K56-2Valvano]
gi|229813273|sp|B4EN29.1|DXS_BURCJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|198038806|emb|CAR54768.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia cenocepacia
J2315]
gi|443592944|gb|ELT61708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
K56-2Valvano]
gi|443597989|gb|ELT66389.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
BC7]
Length = 634
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 195/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIRELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 430 YDLAFMRCIPNMTIM 444
>gi|421866285|ref|ZP_16297957.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia cenocepacia
H111]
gi|358073868|emb|CCE48835.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia cenocepacia
H111]
Length = 634
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 195/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIRELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 430 YDLAFMRCIPNMTIM 444
>gi|413965126|ref|ZP_11404352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. SJ98]
gi|413927800|gb|EKS67089.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. SJ98]
Length = 638
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 196/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +RQ G+ E+ +D FG HSSTSISA L GMA+ L G N
Sbjct: 89 MPGLRQLGGISGFPRRAESEYDTFGTAHSSTSISAAL----------GMAIANKLQGDNR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVADDVPLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + + ++ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLRHAPPVLDL---ARKLEEHAKGMIVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIKELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K FP R FDVGIAEQHAV
Sbjct: 310 APSKKTYTQVFGEWLCDAAAQDSRVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLAA+G+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH G
Sbjct: 370 TFAGGLAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGN 429
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 430 YDLAFLRCIPNMTVM 444
>gi|153872363|ref|ZP_02001280.1| Deoxyxylulose-5-phosphate synthase [Beggiatoa sp. PS]
gi|152071171|gb|EDN68720.1| Deoxyxylulose-5-phosphate synthase [Beggiatoa sp. PS]
Length = 619
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/367 (38%), Positives = 195/367 (53%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT G+ E+++D FGVGHSSTSISA L GMA+ L N
Sbjct: 90 MSTLRQTNGIAGFPKRRESIYDTFGVGHSSTSISAAL----------GMAIANHQLDSNR 139
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLH------SNPQFRQLCQEA 99
V+++I +GA A M++EA+N+AG +LN + SN + L +
Sbjct: 140 KVVAIIGDGAMTAGMAFEALNHAGDMDTNILVILNDNDMSISPNVGGLSNYFAKILSSQL 199
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
++S ++ + +M + ++ E + FE+LG YIGP+DGH+L L
Sbjct: 200 YTSMREGSKHLLERMPTVRELAKRTEEHVKGMVAPGTLFEELGFNYIGPIDGHDLPLLLS 259
Query: 154 VLKQVKAIPDPGAVLIHVITEKEK----------------AMLPLKLQQ----------T 187
LK ++ + P +H+IT+K K A P Q T
Sbjct: 260 TLKNMRVLEGPQ--FLHIITQKGKGFPSAEDDPCVYHGVSAFDPKTGQMESKSTDAPTYT 317
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F L D R+ G G+GL F FP R FDVGIAEQH+VT AAG+A
Sbjct: 318 KIFSDWLCDMAAHDERLIGITPAMREGSGLVDFSTLFPDRYFDVGIAEQHSVTLAAGIAC 377
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADGPTH G+FD ++
Sbjct: 378 EGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGLVGADGPTHAGSFDLAYLRS 437
Query: 295 LPNMVVM 301
+PNM++M
Sbjct: 438 IPNMLIM 444
>gi|296133202|ref|YP_003640449.1| deoxyxylulose-5-phosphate synthase [Thermincola potens JR]
gi|296031780|gb|ADG82548.1| deoxyxylulose-5-phosphate synthase [Thermincola potens JR]
Length = 638
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 191/371 (51%), Gaps = 87/371 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ GL E+ +D+F GHSSTSISA L GMA+ RDL +N HV
Sbjct: 92 TLRQYGGLSGFPKRSESEYDSFNTGHSSTSISAVL----------GMALARDLKKENFHV 141
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
I+VI +GA M++EA+N N G L+ L R+ ++P +
Sbjct: 142 IAVIGDGALTGGMAFEALNHAGHLGTNIIVVLNDNEMSISENVGALSGYLSRMRTDPMYN 201
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+ +E + K G + + D+F + G FE+LG Y+GP+DGHN+
Sbjct: 202 RHKEEMENLLKKIPSIGPTVFKAIERIKDSFKYLVVPG---MIFEELGFTYLGPIDGHNI 258
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK------------------------- 183
++ VL++ K P +++HV+T K K P +
Sbjct: 259 MEVKTVLERAKRTKGP--IMVHVVTRKGKGYEPAEKNPDRFHGIGPFNINTGEPVSASSV 316
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+ T +F K L D R M GTGL F + FP R FDVGIAEQHAVT AA
Sbjct: 317 VSYTEIFGKTLCQLAADDERLLAITAAMPTGTGLTRFAELFPDRFFDVGIAEQHAVTLAA 376
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA EG +P AIYS+FLQR +DQ+ HDV +Q LPV FA+DRAGLVG DG TH G +D
Sbjct: 377 GLATEGFRPVVAIYSTFLQRAYDQILHDVAMQDLPVIFAVDRAGLVGEDGETHQGIYDFA 436
Query: 291 FMACLPNMVVM 301
++ +PNMV+M
Sbjct: 437 YLRHIPNMVIM 447
>gi|167627944|ref|YP_001678444.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella philomiragia
subsp. philomiragia ATCC 25017]
gi|189027775|sp|B0U0B3.1|DXS_FRAP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|167597945|gb|ABZ87943.1| 1-deoxyxylulose-5-phosphate synthase [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 618
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 196/363 (53%), Gaps = 76/363 (20%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ G+ E+ +D FGVGHSSTSISA L GMA+ L GK++
Sbjct: 93 TIKKDGGISGFPKRSESEYDTFGVGHSSTSISAAL----------GMAIADRLQGKHSSS 142
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF-- 100
I+VI +GA M++EA+N+AG +LN + N F ++ F
Sbjct: 143 IAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSAHFSKIISGGFYN 202
Query: 101 SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVL 155
S ++K ++ + + F ++IE ++ A FFEDLG YY+GP+DGHN+ +L L
Sbjct: 203 SIREKGKEVLKNIPPMFEFVKKIETQTKGMFVPANFFEDLGFYYVGPIDGHNVVELVKTL 262
Query: 156 KQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ-------------------TRLFC 191
+ +K G L+HVIT+K K P+K + +F
Sbjct: 263 RILK--DHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGDAQSKASKPTYSNIFG 320
Query: 192 KIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLK 238
+ D R+ G G+ L F + +P R FDV IAEQHAVTFA GLA +GLK
Sbjct: 321 NWICQKAAKDKRLVGVTPAMKEGSDLIRFSQQYPNRYFDVAIAEQHAVTFAGGLACQGLK 380
Query: 239 PFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNM 298
P AIYS+FLQR +DQV HD+ LQ L V +A+DRAGLVGADG TH G+FD +FM C+PN
Sbjct: 381 PVVAIYSTFLQRAYDQVIHDIALQDLDVLYAVDRAGLVGADGATHDGSFDISFMRCIPNH 440
Query: 299 VVM 301
V+M
Sbjct: 441 VIM 443
>gi|254248779|ref|ZP_04942099.1| Deoxyxylulose-5-phosphate synthase [Burkholderia cenocepacia PC184]
gi|124875280|gb|EAY65270.1| Deoxyxylulose-5-phosphate synthase [Burkholderia cenocepacia PC184]
Length = 646
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 195/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 101 MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 150
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 151 FSIAVIGDGAMTAGMAFEAMNNAGVSENAKLLVILNDNDMSISPPVGALNRHLARLMSG- 209
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 210 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 263
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 264 HDLDSLIPTLQNIRELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 321
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 322 TPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 381
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 382 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 441
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 442 YDLAFMRCIPNMTIM 456
>gi|107026830|ref|YP_624341.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
AU 1054]
gi|116691976|ref|YP_837509.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
HI2424]
gi|123461833|sp|A0AYZ0.1|DXS_BURCH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|105896204|gb|ABF79368.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
AU 1054]
gi|116649976|gb|ABK10616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
HI2424]
Length = 646
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 195/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 101 MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 150
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 151 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 209
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 210 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 263
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 264 HDLDSLIPTLQNIRELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 321
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 322 TPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 381
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 382 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 441
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 442 YDLAFMRCIPNMTIM 456
>gi|194097633|ref|YP_002000669.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
NCCP11945]
gi|385334915|ref|YP_005888862.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
TCDC-NG08107]
gi|229836069|sp|B4RNW6.1|DXS_NEIG2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|193932923|gb|ACF28747.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
NCCP11945]
gi|317163458|gb|ADV06999.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 637
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAATDKLLGGDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKEGGAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|115358001|ref|YP_775139.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia ambifaria
AMMD]
gi|122321876|sp|Q0BAL8.1|DXS_BURCM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|115283289|gb|ABI88805.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia ambifaria
AMMD]
Length = 646
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 196/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 101 MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 150
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 151 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 209
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 210 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 263
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 264 HDLDSLIPTLQNIRELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSP 321
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 322 TPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 381
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 382 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 441
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 442 YDLAFMRCIPNMTIM 456
>gi|268594019|ref|ZP_06128186.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
35/02]
gi|268547408|gb|EEZ42826.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria gonorrhoeae
35/02]
Length = 637
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAATDKLLGGDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKEGGAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|83746514|ref|ZP_00943565.1| 1-deoxy-D-xylulose 5-phosphate synthase [Ralstonia solanacearum
UW551]
gi|207743825|ref|YP_002260217.1| 1-deoxy-d-xylulose-5-phosphate synthase
(1-deoxyxylulose-5-phosphate synthase) (dxp synthase)
(dxps) protein [Ralstonia solanacearum IPO1609]
gi|83726845|gb|EAP73972.1| 1-deoxy-D-xylulose 5-phosphate synthase [Ralstonia solanacearum
UW551]
gi|206595225|emb|CAQ62152.1| 1-deoxy-d-xylulose-5-phosphate synthase
(1-deoxyxylulose-5-phosphate synthase) (dxp synthase)
(dxps) protein [Ralstonia solanacearum IPO1609]
Length = 636
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/377 (38%), Positives = 196/377 (51%), Gaps = 93/377 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA G G++
Sbjct: 90 MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAAL----------GMAQGAKTQGESR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 140 VAIAVIGDGAMSAGMAFEAMNNAGVYKDLPLVVVLNDNDMSISPPVGALNRYLARLMSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K +K + F++ E ++ A FE+ G YIGP+DG
Sbjct: 199 QFYA------ATKKGVEKLLSVAPPVLEFAKRFEEHAKGMLVPATMFEEFGFNYIGPIDG 252
Query: 146 HNLEDLAYVLKQVK--AIPDPGAVLIHVITEK--------------------------EK 177
H+L L L+ ++ A+ G +HV+T+K +
Sbjct: 253 HDLGSLVPTLQNIRQRALEGGGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPQEGIKP 312
Query: 178 AMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQH 224
A P K+ T++F + L D R+ G G+G+ F++ FP R +DVGIAEQH
Sbjct: 313 ATRPAKVSYTQVFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQH 372
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 373 AVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHA 432
Query: 285 GAFDTTFMACLPNMVVM 301
GA+D ++ C+PNM+VM
Sbjct: 433 GAYDMAYLRCIPNMMVM 449
>gi|170736030|ref|YP_001777290.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
MC0-3]
gi|119368197|sp|Q1BLY7.2|DXS_BURCA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|229813272|sp|B1K3S9.1|DXS_BURCC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|169818218|gb|ACA92800.1| deoxyxylulose-5-phosphate synthase [Burkholderia cenocepacia MC0-3]
Length = 634
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 195/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIRELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 430 YDLAFMRCIPNMTIM 444
>gi|335046621|ref|ZP_08539644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oribacterium sp. oral
taxon 108 str. F0425]
gi|333760407|gb|EGL37964.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oribacterium sp. oral
taxon 108 str. F0425]
Length = 624
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 189/356 (53%), Gaps = 80/356 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D F GHSSTSISA L G+A GRDLLG++ V++VI +GA M+Y
Sbjct: 104 ESPYDCFNTGHSSTSISAAL----------GIAEGRDLLGEDYTVLAVIGDGALTGGMAY 153
Query: 71 EAINNA----------------------GVLNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNA G ++ L + S+ + + + SS K
Sbjct: 154 EALNNASKMKKNFIIILNDNEMSIAKNVGGMSTYLNGIRSHKGYTRFKENLASSLGKIPV 213
Query: 109 FGGQMHE-----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
G ++ E ++ + + G FE++GL Y+GPVDGHNL L V+ + K I
Sbjct: 214 IGDRLVERLKNTKNSIKQLLVPG---MLFENMGLTYLGPVDGHNLHALEQVIHEAKRIDH 270
Query: 164 PGAVLIHVITEKEKAMLP-------------------------LKLQQTRLFCKIL---- 194
AVL+HV+T+K K +P + T +F + L
Sbjct: 271 --AVLVHVVTKKGKGYVPAEQNPSVFHGVGPFDIATGKSKKESTEKSYTDIFAESLIKEG 328
Query: 195 --DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS 245
D R M GTGL F+K FP R FDVGIAE HAVT AAGLA+ GLKP A+YS
Sbjct: 329 KEDARIVAITAAMPDGTGLTKFEKAFPKRFFDVGIAEAHAVTSAAGLASAGLKPVFAVYS 388
Query: 246 SFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
SFLQR +DQ+ HDV LQKLPV FAIDRAGLVGADG TH G FD +++ +PNM VM
Sbjct: 389 SFLQRAYDQMVHDVCLQKLPVVFAIDRAGLVGADGETHQGIFDISYLRSIPNMTVM 444
>gi|333897021|ref|YP_004470895.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112286|gb|AEF17223.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 617
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/369 (39%), Positives = 195/369 (52%), Gaps = 85/369 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+R+ GL E+ HD F GHSSTSISA L G+A RDL + V
Sbjct: 88 TLRKFGGLSGFPKRNESEHDIFETGHSSTSISAAL----------GIAKARDLNNEKYSV 137
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKA--------------LKRLHSNPQFR 93
ISVI +GA M++EA+N+AG +LN L RL ++P +
Sbjct: 138 ISVIGDGALTGGMAFEALNDAGRSKTNLIVILNHNEMSISQNVGSLSLYLSRLRTDPSYF 197
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+L ++ + + G +H+ D+ + I G FFE++G Y+GP+DGH+L
Sbjct: 198 KLKKDLENILNIIPPIGKSIHKSIEKIKDSIKQLIVPG---MFFEEMGFTYLGPIDGHDL 254
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ----------------- 186
+ L VLK+ K + P +LIHVIT+K K + P K
Sbjct: 255 DSLIDVLKRAKKMNGP--ILIHVITKKGKGYVFAEDNPDKFHSAGIFDIGTGEFKKRTDT 312
Query: 187 -TRLFCKIL-----DNR--------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
+ +F K L +N+ M GTGLN F + FP R +DVGIAEQHA TFAAG+
Sbjct: 313 YSDVFGKTLTHLAENNKKIVAITAAMPDGTGLNYFAEKFPNRFYDVGIAEQHAATFAAGM 372
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
A G KP+ A+YS+FLQR FDQV HD+ +Q LPV A+DRAGLVG DG TH G FD +++
Sbjct: 373 AVNGYKPYFAVYSTFLQRAFDQVIHDICIQNLPVVLAVDRAGLVGEDGETHQGVFDISYL 432
Query: 293 ACLPNMVVM 301
+PNM VM
Sbjct: 433 RMIPNMTVM 441
>gi|300703493|ref|YP_003745095.1| 1-deoxy-d-xylulose 5-phosphate synthase [Ralstonia solanacearum
CFBP2957]
gi|299071156|emb|CBJ42470.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
thiamin-binding [Ralstonia solanacearum CFBP2957]
Length = 637
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/378 (38%), Positives = 194/378 (51%), Gaps = 94/378 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA G G++
Sbjct: 90 MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAAL----------GMAQGAKTRGESR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 140 VAIAVIGDGAMSAGMAFEAMNNAGVYKNLPLVVVLNDNDMSISPPVGALNRYLARLMSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K +K + F++ E ++ A FE+ G YIGP+DG
Sbjct: 199 QFYA------ATKKGVEKLLSVAPPVLEFAKRFEEHAKGMLVPATMFEEFGFNYIGPIDG 252
Query: 146 HNLEDLAYVLKQVK--AIPDPGAVLIHVITEK---------------------------E 176
H+L L L+ ++ A+ G +HV+T+K
Sbjct: 253 HDLGSLVPTLQNIRQRALEGGGPQFLHVVTKKGQGYKLAEADPVKYHAASGRFDPAVGFA 312
Query: 177 KAMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQ 223
K P K T+LF + L D R+ G G+G+ F++ FP R +DVGIAEQ
Sbjct: 313 KPATPPKTSYTQLFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQ 372
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
HAVTFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 373 HAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATH 432
Query: 284 CGAFDTTFMACLPNMVVM 301
GA+D ++ C+PNM+VM
Sbjct: 433 AGAYDMAYLRCIPNMMVM 450
>gi|288818660|ref|YP_003433008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hydrogenobacter
thermophilus TK-6]
gi|384129412|ref|YP_005512025.1| deoxyxylulose-5-phosphate synthase [Hydrogenobacter thermophilus
TK-6]
gi|288788060|dbj|BAI69807.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hydrogenobacter
thermophilus TK-6]
gi|308752249|gb|ADO45732.1| deoxyxylulose-5-phosphate synthase [Hydrogenobacter thermophilus
TK-6]
Length = 631
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/364 (39%), Positives = 190/364 (52%), Gaps = 78/364 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+V+DAFG GHSSTSISA L G DLL + +V
Sbjct: 94 TLRQYGGISGFLRREESVYDAFGAGHSSTSISAAL----------GFRKAMDLLDQKGYV 143
Query: 56 ISVIVEGATIARMSYEAINNAGVL--NKALKRLHSNPQFRQLCQEAFSS----------- 102
++VI +GA A M++EA+NNAG L N+ + L+ N A S+
Sbjct: 144 VAVIGDGAMTAGMAFEALNNAGHLRPNRFIVILNDNEMSISPNVGAISTYLSKILSGRFV 203
Query: 103 KDKKQKFGGQMHEIDAFSR------EIEAG--SRACFFEDLGLYYIGPVDGHNLEDLAYV 154
++ +Q+ + I SR E G S FE+LG YIGPV+GH+L+ L
Sbjct: 204 QETRQRVKRLLEHISGVSRIAKLTEEFLKGLISPGIIFEELGFNYIGPVNGHDLQALERT 263
Query: 155 LKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------LQQTRL 189
L+ +K+I P VL+H+ T+K K P + T +
Sbjct: 264 LENIKSIEGP--VLLHIYTKKGKGYKPAENDPVTWHGVAPYKRESGEFIKKPSPPTWTSI 321
Query: 190 FCK-------------ILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEG 236
F K ++ M G+GL F + FP R FDVGIAEQHA TFA GLAA+G
Sbjct: 322 FGKAVVELAQMYPDLVVITPAMREGSGLVEFSQKFPERFFDVGIAEQHACTFAGGLAAQG 381
Query: 237 LKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLP 296
LKP A YS+FLQR +DQV HD+ LQ L V FAIDR GLVG DGPTH G FD +++ C+P
Sbjct: 382 LKPIAAYYSTFLQRAYDQVIHDIALQNLHVVFAIDRGGLVGDDGPTHHGVFDLSYLRCIP 441
Query: 297 NMVV 300
NMVV
Sbjct: 442 NMVV 445
>gi|355672444|ref|ZP_09058374.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium citroniae
WAL-17108]
gi|354815145|gb|EHE99741.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium citroniae
WAL-17108]
Length = 624
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 189/369 (51%), Gaps = 85/369 (23%)
Query: 4 IRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVI 56
+RQ GL E+ +D+F GHSSTSISAGL G+A+GRDL G + V+
Sbjct: 90 LRQYGGLSGFPKRKESPYDSFDTGHSSTSISAGL----------GIALGRDLKGLDYKVV 139
Query: 57 SVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQFRQ 94
SVI +GA M+YEA+NNA G +++ L L + +
Sbjct: 140 SVIGDGALTGGMAYEALNNAARMKRNFIIVLNDNNMSISENVGGMSRYLNGLRTGSGYND 199
Query: 95 LCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR----ACFFEDLGLYYIGPVDGHNLED 150
L + + D+ G M ID R + + FE++G+ Y+GPVDGHN+
Sbjct: 200 LKKNVADALDRIPVVGSVM--IDKIKRTKNSIKQLFIPGMLFENMGITYLGPVDGHNIPA 257
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLP---------------------LKLQQTRL 189
L VL++ + + AVL+HVIT+K K P L Q+
Sbjct: 258 LCKVLREAQKLDH--AVLVHVITKKGKGYRPAEKNPSHFHGVGPFDVDTGKPLSEQKNPS 315
Query: 190 FCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
+ + + M GTGL F K +P R FDVGIAE HAVT AAG+
Sbjct: 316 YTDVFSRKICQLGEQYPNLVAVTAAMPDGTGLTAFGKKYPHRFFDVGIAEAHAVTSAAGM 375
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
AA GLKP A+YSSFLQR +DQ+ HDV +Q LPV FA+DRAGLVG+DG TH G FD +F+
Sbjct: 376 AAAGLKPVVAVYSSFLQRAYDQILHDVCIQNLPVLFAVDRAGLVGSDGETHQGIFDYSFL 435
Query: 293 ACLPNMVVM 301
+PNM VM
Sbjct: 436 TSIPNMSVM 444
>gi|161702975|ref|YP_372966.2| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. 383]
gi|118595497|sp|Q393P4.2|DXS_BURS3 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
Length = 634
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 195/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MHSLRQQDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKVLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIRELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA G+A EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGMATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 430 YDLAFMRCIPNMTIM 444
>gi|386332877|ref|YP_006029046.1| 1-deoxy-d-xylulose-5-phosphate synthase protein [Ralstonia
solanacearum Po82]
gi|334195325|gb|AEG68510.1| 1-deoxy-d-xylulose-5-phosphate synthase protein [Ralstonia
solanacearum Po82]
Length = 637
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 147/378 (38%), Positives = 194/378 (51%), Gaps = 94/378 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA G G++
Sbjct: 90 MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAAL----------GMAQGAKTRGESR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 140 VAIAVIGDGAMSAGMAFEAMNNAGVYKDLPLVVVLNDNDMSISPPVGALNRYLARLMSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K +K + F++ E ++ A FE+ G YIGP+DG
Sbjct: 199 QFYA------ATKKGVEKLLSVAPPVLEFAKRFEEHAKGMLVPATMFEEFGFNYIGPIDG 252
Query: 146 HNLEDLAYVLKQVK--AIPDPGAVLIHVITEK---------------------------E 176
H+L L L+ ++ A+ G +HV+T+K
Sbjct: 253 HDLGSLVPTLQNIRQRALEGGGPQFLHVVTKKGQGYKLAEADPVKYHAASGRFDPAVGFA 312
Query: 177 KAMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQ 223
K P K T+LF + L D R+ G G+G+ F++ FP R +DVGIAEQ
Sbjct: 313 KPATPPKTSYTQLFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQ 372
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
HAVTFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 373 HAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATH 432
Query: 284 CGAFDTTFMACLPNMVVM 301
GA+D ++ C+PNM+VM
Sbjct: 433 AGAYDMAYLRCIPNMMVM 450
>gi|421897746|ref|ZP_16328113.1| 1-deoxy-d-xylulose-5-phosphate synthase
(1-deoxyxylulose-5-phosphate synthase) (dxp synthase)
(dxps) protein [Ralstonia solanacearum MolK2]
gi|206588952|emb|CAQ35914.1| 1-deoxy-d-xylulose-5-phosphate synthase
(1-deoxyxylulose-5-phosphate synthase) (dxp synthase)
(dxps) protein [Ralstonia solanacearum MolK2]
Length = 637
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 147/378 (38%), Positives = 194/378 (51%), Gaps = 94/378 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA G G++
Sbjct: 90 MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAAL----------GMAQGAKTQGESR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 140 VAIAVIGDGAMSAGMAFEAMNNAGVYKDLPLVVVLNDNDMSISPPVGALNRYLARLMSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K +K + F++ E ++ A FE+ G YIGP+DG
Sbjct: 199 QFYA------ATKKGVEKLLSVAPPVLEFAKRFEEHAKGMLVPATMFEEFGFNYIGPIDG 252
Query: 146 HNLEDLAYVLKQVK--AIPDPGAVLIHVITEK---------------------------E 176
H+L L L+ ++ A+ G +HV+T+K
Sbjct: 253 HDLGSLVPTLQNIRQRALEGGGPQFLHVVTKKGQGYKLAEADPVKYHAASGRFDPAVGFA 312
Query: 177 KAMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQ 223
K P K T+LF + L D R+ G G+G+ F++ FP R +DVGIAEQ
Sbjct: 313 KPATPPKTSYTQLFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQ 372
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
HAVTFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 373 HAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATH 432
Query: 284 CGAFDTTFMACLPNMVVM 301
GA+D ++ C+PNM+VM
Sbjct: 433 AGAYDMAYLRCIPNMMVM 450
>gi|416179647|ref|ZP_11611083.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M6190]
gi|416190179|ref|ZP_11615659.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
ES14902]
gi|433493283|ref|ZP_20450368.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM586]
gi|433503666|ref|ZP_20460621.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM126]
gi|325131509|gb|EGC54216.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M6190]
gi|325139237|gb|EGC61783.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
ES14902]
gi|432226524|gb|ELK82251.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM586]
gi|432238868|gb|ELK94431.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM126]
Length = 637
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 149/381 (39%), Positives = 195/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VL+ ++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLEDLRGRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|329908092|ref|ZP_08274827.1| 1-deoxy-D-xylulose 5-phosphate synthase [Oxalobacteraceae bacterium
IMCC9480]
gi|327546762|gb|EGF31698.1| 1-deoxy-D-xylulose 5-phosphate synthase [Oxalobacteraceae bacterium
IMCC9480]
Length = 616
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 145/372 (38%), Positives = 190/372 (51%), Gaps = 89/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ G+N
Sbjct: 88 MHTLRQRDGISGFPRRAESEYDTFGTAHSSTSISAAL----------GMALAARTKGENR 137
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
H +++I +GA A M +EA+NNAGV LN+ L RL S
Sbjct: 138 HAVAIIGDGAMTAGMVFEAMNNAGVYDDINLLVILNDNDMSISPPVGALNQYLARLMSGK 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS--RACFFEDLGLYYIGPVDGHNL 148
+ A + K + E+ E G A FE+ G YIGP+DGH+L
Sbjct: 198 FY------AAARNVGKSVLPAPVLELAKRFEEHAKGMVVPATMFEEFGFNYIGPIDGHDL 251
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAMLPL 182
+ L L+ +K + P +HV+T+K + A +P
Sbjct: 252 DALIPTLQNLKHLKGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPEVGIKPATVPA 309
Query: 183 KLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
K+ T++F L D R+ G G+G+ F++ FP R FDVGIAEQHAVTFA
Sbjct: 310 KMTYTQVFGDWLCDMAAQDKRLIGITPAMREGSGMVRFEQQFPARYFDVGIAEQHAVTFA 369
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AG+A EGLKP AIYS+FLQR +DQ+ HDV LQ L V FA+DRAGLVGADG TH G +D
Sbjct: 370 AGMATEGLKPVLAIYSTFLQRGYDQLIHDVALQDLDVTFALDRAGLVGADGATHAGNYDM 429
Query: 290 TFMACLPNMVVM 301
F+ C+PNMVVM
Sbjct: 430 AFLRCIPNMVVM 441
>gi|255022131|ref|ZP_05294134.1| 1-deoxy-D-xylulose 5-phosphate synthase [Acidithiobacillus caldus
ATCC 51756]
gi|340782899|ref|YP_004749506.1| 1-deoxy-D-xylulose 5-phosphate synthase [Acidithiobacillus caldus
SM-1]
gi|254968395|gb|EET25954.1| 1-deoxy-D-xylulose 5-phosphate synthase [Acidithiobacillus caldus
ATCC 51756]
gi|340557050|gb|AEK58804.1| 1-deoxy-D-xylulose 5-phosphate synthase [Acidithiobacillus caldus
SM-1]
Length = 624
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 139/352 (39%), Positives = 183/352 (51%), Gaps = 75/352 (21%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ DAFG GHSSTSISA L GMAV L + V+++I +GA A ++Y
Sbjct: 106 ESPFDAFGAGHSSTSISAAL----------GMAVAAKLTQRQRQVVAIIGDGAMTAGLAY 155
Query: 71 EAINNAGVLNKAL------KRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE--------- 115
EA+NNAGVL+ L + +P + Q + ++ +F M E
Sbjct: 156 EALNNAGVLDADLLVVLNDNEMSISPNVGAVSQ--YLTRILSGRFYNSMREGAGQALSLV 213
Query: 116 --IDAFSREIEAG-----SRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVL 168
+ +R+ E G S FE++G +Y GP+DGH+L+ L L+ +K I P L
Sbjct: 214 PPLRELARKAEEGVKGLVSPGVLFEEMGFHYYGPIDGHDLDVLIPTLENLKKIKGP--RL 271
Query: 169 IHVITEKEKA-------------MLPLKLQQTRLFCK----------------------- 192
+HVIT K K + P Q R+ K
Sbjct: 272 LHVITRKGKGFAPAEADPCTYHGVTPFDRQDGRMVKKSGGAPSYTQVFGDWICDKAAAES 331
Query: 193 ---ILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQ 249
+ M G+GL FQ+ +P R FDVGIAEQHAVTFAAGLA EG +P AIYS+FLQ
Sbjct: 332 TLVAITPAMREGSGLVRFQQLYPERYFDVGIAEQHAVTFAAGLACEGQRPVVAIYSTFLQ 391
Query: 250 RCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
R +DQ+ HDV +Q LPV FAIDRAGLVGADG TH GAFD + C+PN+ +M
Sbjct: 392 RAYDQLLHDVAIQNLPVLFAIDRAGLVGADGATHQGAFDMAYARCIPNLTIM 443
>gi|302387566|ref|YP_003823388.1| deoxyxylulose-5-phosphate synthase [Clostridium saccharolyticum
WM1]
gi|302198194|gb|ADL05765.1| deoxyxylulose-5-phosphate synthase [Clostridium saccharolyticum
WM1]
Length = 632
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/350 (39%), Positives = 185/350 (52%), Gaps = 78/350 (22%)
Query: 15 DAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSYEAIN 74
DAF GHSSTSISAGL G+A RD+LG+++ V+SVI +GA M+YEA+N
Sbjct: 108 DAFDTGHSSTSISAGL----------GLAQARDVLGEDHFVVSVIGDGALTGGMAYEALN 157
Query: 75 NAGVLNKA----------------------LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
NA +NK L + + + L + + + G Q
Sbjct: 158 NAARMNKNFIIILNDNNMSISENVGGMSTYLNSIRTGEGYLDLKRHVTNVLSRIPGIGEQ 217
Query: 113 MHEIDAFSREIEAGSR----ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVL 168
+ ID SR + FE++G+ Y+GPVDGHN++ L+ L++ K +P VL
Sbjct: 218 I--IDKISRTKNGIKQLLIPGMLFENMGITYLGPVDGHNVKALSRTLREAKKLPH--TVL 273
Query: 169 IHVITEKEKAMLPLKLQQTR-------------------------LFCKIL------DNR 197
+HVIT+K K P + ++ +F K + D R
Sbjct: 274 VHVITQKGKGYAPAERNPSKFHGVEPFNIITGEPKKKKKDPSYTDVFSKAICRLAEQDKR 333
Query: 198 -------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR 250
M GTGL F + +P R FDVGIAE+HAVT AAG+AA GLKP A+YSSFLQR
Sbjct: 334 IVAVTAAMPDGTGLKRFSRLYPDRFFDVGIAEEHAVTSAAGMAAGGLKPVVAVYSSFLQR 393
Query: 251 CFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVV 300
FDQ+ HDV +Q LPV FAIDRAGLVG+DG TH G FD +++ +PNM V
Sbjct: 394 SFDQILHDVCIQNLPVVFAIDRAGLVGSDGETHQGIFDLSYLTAIPNMSV 443
>gi|77970943|gb|ABB12322.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. 383]
Length = 646
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 195/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 101 MHSLRQQDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 150
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 151 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKVLVILNDNDMSISPPVGALNRHLARLMSG- 209
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 210 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 263
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 264 HDLDSLIPTLQNIRELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 321
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 322 TPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 381
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA G+A EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 382 TFAGGMATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 441
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 442 YDLAFMRCIPNMTIM 456
>gi|224004236|ref|XP_002295769.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585801|gb|ACI64486.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 747
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 200/380 (52%), Gaps = 92/380 (24%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGK-NNH 54
T+RQ G+ E+ +D+FG GHSSTSISA GM+V + LL K N+
Sbjct: 142 TLRQLGGISGFCKRKESEYDSFGAGHSSTSISAAQ----------GMSVAKSLLNKRKNN 191
Query: 55 VISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQF------------RQLCQ-EAF 100
I+VI +GA M+YEA+NNAG L+ + + L+ N Q R Q A+
Sbjct: 192 CIAVIGDGAITGGMAYEAMNNAGYLSSRMIVVLNDNGQVSLPTGTQTAGGVRPASQLSAY 251
Query: 101 SS---------------KDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLYYIG 141
+S K + F + ++ D ++R + G FE+LG +Y+G
Sbjct: 252 TSNLIVSKPFQDFRDFAKSLNRLFPENVQDVNKRLDEYARGLVTG--GTVFEELGFFYVG 309
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPL------------------- 182
P+DGH+L+++ +L++++ VL+H+ T K + P
Sbjct: 310 PIDGHDLDNMVPILEKLRDSDSTKPVLLHIKTNKGQGYPPALAASDKMHGVGKFDIATGI 369
Query: 183 -------KLQQTRLFCKIL-----DNR--------MGGGTGLNLFQKHFPIRCFDVGIAE 222
T +F + ++R M GGTG+++F + FP R +DVGIAE
Sbjct: 370 QVKGKAASPSLTSIFANAMIDAATEDRAIVGITAAMPGGTGMDIFGRRFPKRTYDVGIAE 429
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAG+A EGLKPFC IYS+F+QR +DQV HDV +Q LPVR +DRAG+VG DGPT
Sbjct: 430 QHAVTFAAGMACEGLKPFCCIYSTFMQRGYDQVVHDVAIQNLPVRMILDRAGVVGNDGPT 489
Query: 283 HCGAFDTTFMACLPNMVVMK 302
H G +D ++ C+PN+ +M
Sbjct: 490 HHGCYDLAYLGCIPNLTIMS 509
>gi|261400546|ref|ZP_05986671.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria lactamica ATCC
23970]
gi|269209616|gb|EEZ76071.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria lactamica ATCC
23970]
Length = 641
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 150/385 (38%), Positives = 195/385 (50%), Gaps = 97/385 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG N
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGGNR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMELAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VL+ ++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLEDLRGRKGP--QLLHVITKKGNGYKLAENDPVKYHAVAKLPKDVSDGP 318
Query: 176 ------EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRC 215
EK P K T++F K L +R M G+GL F++ FP R
Sbjct: 319 KTATPSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRY 378
Query: 216 FDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGL 275
FDVGIAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+
Sbjct: 379 FDVGIAEQHAVTFAGGLACEGIKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGI 438
Query: 276 VGADGPTHCGAFDTTFMACLPNMVV 300
VGADGPTH G +D +F+ C+PNM+V
Sbjct: 439 VGADGPTHAGLYDLSFLRCIPNMIV 463
>gi|357404682|ref|YP_004916606.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylomicrobium
alcaliphilum 20Z]
gi|351717347|emb|CCE23012.1| 1-deoxy-D-xylulose-5-phosphate synthase
(1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
(DXPS) [Methylomicrobium alcaliphilum 20Z]
Length = 620
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 140/368 (38%), Positives = 196/368 (53%), Gaps = 79/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIR G+ E+ +DAFGVGHSSTSISA L GMA+ L G++
Sbjct: 94 MTTIRTRDGICAFPNRSESEYDAFGVGHSSTSISAAL----------GMAIASGLRGEDK 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQF--------RQLCQEA 99
H +++I +G+ M++EA+N+AG ++ L + +P + L +
Sbjct: 144 HCVAIIGDGSITGGMAFEAMNHAGAIDANLLVILNDNDMSISPNVGALNNYLTKILSSKI 203
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
+SS +++ +K M + +R+ E + FE++G YIGP+DGH+L+ L
Sbjct: 204 YSSVREESKKALSSMPSVWELARKTEEHMKGMVVPGTLFEEMGFNYIGPIDGHDLDMLVS 263
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------------------- 186
L+ +K I P +H++T+K K P +
Sbjct: 264 TLENLKHISGP--RFLHIVTKKGKGYAPAEKDPLAYHGVPAFDPSRDCLPKSAPSPHPTY 321
Query: 187 TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D R+ G G+GL F + FP R FDV IAEQHAVT AAGLA
Sbjct: 322 TQVFGQWLCDMAEQDERLLGITPAMREGSGLVAFSERFPKRYFDVAIAEQHAVTLAAGLA 381
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
EG KP AIYS+FLQR +DQ+ HDV LQ L V FA+DRAGLVG DGPTH G+FD T+M
Sbjct: 382 CEGGKPVVAIYSTFLQRGYDQLIHDVVLQDLDVLFALDRAGLVGPDGPTHAGSFDYTYMR 441
Query: 294 CLPNMVVM 301
CLPNM++M
Sbjct: 442 CLPNMLIM 449
>gi|172062808|ref|YP_001810459.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia ambifaria
MC40-6]
gi|229813264|sp|B1Z1G2.1|DXS_BURA4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|171995325|gb|ACB66243.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria MC40-6]
Length = 634
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 196/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIRELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSP 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 430 YDLAFMRCIPNMTIM 444
>gi|113868690|ref|YP_727179.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia eutropha H16]
gi|123032800|sp|Q0K860.1|DXS_RALEH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|113527466|emb|CAJ93811.1| Deoxyxylulose-5-phosphate synthase [Ralstonia eutropha H16]
Length = 638
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 194/377 (51%), Gaps = 93/377 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G LG+
Sbjct: 90 MGTLRQWGGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMALGARTLGEKR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
++VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 140 VSVAVIGDGAMTAGMAFEALNNAGVYKDLPLVVVLNDNDMSISPPVGALNRHLARLLSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K +K + F++ E ++ A FE+ G YIGP+DG
Sbjct: 199 QFYA------ATKKGIEKVLSVAPPVLEFAKRFEEHAKGMMVPATLFEEFGFNYIGPIDG 252
Query: 146 HNLEDLAYVLKQVK--AIPDPGAVLIHVITEK--------------------------EK 177
H+L L L+ ++ A+ G +HV+T+K
Sbjct: 253 HDLNSLVPTLQNIRERALEGAGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPAEGIRP 312
Query: 178 AMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQH 224
A P + T++F L D R+ G G+G+ F++ FP R +DVGIAEQH
Sbjct: 313 AAKPARKTYTQVFGDWLCDMAAADKRLVGITPAMREGSGMVEFERRFPDRYYDVGIAEQH 372
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 373 AVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHA 432
Query: 285 GAFDTTFMACLPNMVVM 301
GA+D ++ C+PNM+VM
Sbjct: 433 GAYDIAYLRCIPNMMVM 449
>gi|171320201|ref|ZP_02909261.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria MEX-5]
gi|171094553|gb|EDT39607.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria MEX-5]
Length = 634
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 196/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIRELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSP 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 430 YDLAFMRCIPNMTIM 444
>gi|385339391|ref|YP_005893263.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
G2136]
gi|416207930|ref|ZP_11621017.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
961-5945]
gi|325141562|gb|EGC64028.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
961-5945]
gi|325197635|gb|ADY93091.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
G2136]
Length = 637
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 149/381 (39%), Positives = 195/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VL+ ++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLEDLRGRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|238026700|ref|YP_002910931.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia glumae BGR1]
gi|237875894|gb|ACR28227.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia glumae BGR1]
Length = 648
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 190/375 (50%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+V+D FG HSSTSISA GMAV L
Sbjct: 89 MPTLRQIGGISGFPVRTESVYDTFGTAHSSTSISAAF----------GMAVAAKLQDSER 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 RAIAVIGDGAMTAGMAFEAMNNAGVADDVPLIVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ M +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPML---GLARKLEEHAKGMIMPATMFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK----------------------EKAMLPLK 183
H+L+ L L+ +K + P +HV+T+K + + P
Sbjct: 252 HDLDALIPTLRNIKGLRGP--QFLHVVTKKGLGYKLAEADPVLYHGPGKFNPAEGIRPPA 309
Query: 184 LQQTRLFCKI----------LDNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
+ + ++ LD R+ G G+G+ F+K FP R +DVGIAEQHAV
Sbjct: 310 TPPRKTYAQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPARYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFAAGLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAG+VGADG TH GA
Sbjct: 370 TFAAGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGIVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 430 YDFAFLRCIPNMTVM 444
>gi|434407504|ref|YP_007150389.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cylindrospermum stagnale
PCC 7417]
gi|428261759|gb|AFZ27709.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cylindrospermum stagnale
PCC 7417]
Length = 635
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 189/373 (50%), Gaps = 86/373 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ EN D FG GH+STSISA L GMA+ RDL G+
Sbjct: 89 TLRQKNGVAGYLKRCENKFDHFGAGHASTSISAAL----------GMALARDLKGEKFKA 138
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKA--LKRLHSN-----------PQFRQLCQEAFSS 102
++VI +GA M+ EAIN+AG L K L L+ N P++ + +
Sbjct: 139 VAVIGDGALTGGMALEAINHAGHLPKTSLLVVLNDNEMSISPNVGAIPRYLNKMRLSAPV 198
Query: 103 KDKKQKFGGQMHEI----DAFSREIE----------AGSRACFFEDLGLYYIGPVDGHNL 148
+ K F GQ+ +I ++ S E+E FE+LG Y+GPVDGHNL
Sbjct: 199 QFIKDNFEGQLKQIPFVGESLSPELERIKEGMKRLAVPKVGAVFEELGFTYMGPVDGHNL 258
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAM-----------------------LPLKLQ 185
E+L +Q +P P VL+HV+T K K +P
Sbjct: 259 EELIATFQQAHQMPGP--VLVHVVTTKGKGYEIAELDQVGYHAQNPFNVATGKAIPSNKP 316
Query: 186 QTRLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
+ + K+ + M GTGL+ Q P + DVGIAEQHAVT
Sbjct: 317 KPPAYAKVFSHTLVKLAEQNPKIVGITAAMATGTGLDKLQAKLPNQYIDVGIAEQHAVTL 376
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLA EG++P AIYS+FLQR +DQ+ HDV +Q LPV F +DRAG+VGADGPTH G +D
Sbjct: 377 AAGLATEGMRPVAAIYSTFLQRAYDQIIHDVCIQNLPVFFCLDRAGIVGADGPTHQGMYD 436
Query: 289 TTFMACLPNMVVM 301
++ C+PN+VVM
Sbjct: 437 IAYLRCIPNIVVM 449
>gi|170699440|ref|ZP_02890484.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria
IOP40-10]
gi|170135640|gb|EDT03924.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria
IOP40-10]
Length = 634
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 196/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIRELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSP 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 430 YDLAFMRCIPNMTIM 444
>gi|330821214|ref|YP_004350076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia gladioli
BSR3]
gi|327373209|gb|AEA64564.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia gladioli
BSR3]
Length = 634
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 196/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+V+D FG HSSTSISA L GMA+ L G +
Sbjct: 89 MSSLRQFDGISGFPRRSESVYDTFGTAHSSTSISAAL----------GMALASQLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + +K + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVEKVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIKELRGPQ--FLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 309
Query: 180 LPLKLQQTRLF----CKI--LDNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F C + LD R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDMAELDARVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA G+A EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGMATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM VM
Sbjct: 430 YDLAFLRCIPNMTVM 444
>gi|113476604|ref|YP_722665.1| 1-deoxy-D-xylulose-5-phosphate synthase [Trichodesmium erythraeum
IMS101]
gi|123352111|sp|Q10ZY2.1|DXS_TRIEI RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|110167652|gb|ABG52192.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Trichodesmium erythraeum
IMS101]
Length = 635
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 187/374 (50%), Gaps = 88/374 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+ D FG GH+STSISAGL GMA+ RD+ G N V
Sbjct: 89 TLRQKDGIAGYLKRCESKFDHFGAGHASTSISAGL----------GMALARDMKGDNFKV 138
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKA-----------------------LKRLHSNPQF 92
+S+I +GA M+ EAIN+AG L K L ++ +P
Sbjct: 139 VSIIGDGALTGGMALEAINHAGHLPKTNILVVLNDNEMSISPNVGAISRYLNKMRLSPPI 198
Query: 93 RQLCQEAFSSKDKKQKFGGQ-----MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
Q Q+ + K+ F G+ M + + + E+LG Y+GPVDGHN
Sbjct: 199 -QFLQDNLEEQFKQIPFVGETFTPEMEGLKGGMKRLAVSKVGAVIEELGFTYMGPVDGHN 257
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEK---------------------------AML 180
LE+L Q IP P VL+HV T K K A
Sbjct: 258 LEELITTFNQAHQIPGP--VLVHVATTKGKGYPVAEEDKVSYHAQNPFNLATGKALPASK 315
Query: 181 PLKLQQTRLFC----KILDNR---------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
P + +++F K+ +N M GTGL+ P + DVGIAEQHAVT
Sbjct: 316 PKPPKYSKVFAHTLVKLAENNPKIIGITAAMATGTGLDKLHGKLPKQYIDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
AAGLA+EG++P IYS+FLQR +DQ+ HDV +QKLPV F +DRAG+VGADGPTH G +
Sbjct: 376 LAAGLASEGMRPVVCIYSTFLQRAYDQIIHDVCIQKLPVFFCLDRAGIVGADGPTHQGMY 435
Query: 288 DTTFMACLPNMVVM 301
D ++ C+PNMVVM
Sbjct: 436 DIAYLRCIPNMVVM 449
>gi|385855881|ref|YP_005902394.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M01-240355]
gi|325204822|gb|ADZ00276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
M01-240355]
Length = 635
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 147/379 (38%), Positives = 195/379 (51%), Gaps = 91/379 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R+ GL E+ +DAFGVGHSSTSI A L GMA +LG +
Sbjct: 91 MHTMRRYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAAADKILGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN----PQF--------- 92
+++I +GA A ++EA+N AG +LN + N P++
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 93 RQLCQEAFSSKDKK-QKFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
R L + K K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 RGLLSTIKAQSSKVLDKLPGAMELAQKVEHKIKTLAGEAEHARQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-----------------------EKAML 180
DGHN+E L VLK +++ P L+HVIT+K A +
Sbjct: 261 DGHNVEHLVDVLKDLRSRKGPQ--LLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 181 P------LKLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIA 221
P K T++F K L +R M G+GL F++ FP R FDVGIA
Sbjct: 319 PSENKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIA 378
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGADGP
Sbjct: 379 EQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGP 438
Query: 282 THCGAFDTTFMACLPNMVV 300
TH G +D +F+ C+PNM+V
Sbjct: 439 THAGLYDLSFLRCVPNMIV 457
>gi|225077244|ref|ZP_03720443.1| hypothetical protein NEIFLAOT_02299 [Neisseria flavescens
NRL30031/H210]
gi|224951388|gb|EEG32597.1| hypothetical protein NEIFLAOT_02299 [Neisseria flavescens
NRL30031/H210]
Length = 629
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 193/377 (51%), Gaps = 89/377 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMAV LG N
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAVADKQLGNNR 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN----PQFRQ------- 94
+++I +GA A ++EA+N AG +LN + N P++
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVILNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 95 ---LCQEAFSSKDKKQKFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
L S K G M ++I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTIKAQSSKVLDKLPGAMELAQKVENKIKTLAGEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEK---------------AMLP------- 181
DGHN+E+L VLK ++ P L+HVIT+K A LP
Sbjct: 261 DGHNVENLVDVLKDLRGRKGPQ--LLHVITKKGNGYKFAENDPVKYHAVAKLPSEVPAPE 318
Query: 182 -----LKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQ 223
K T++F + L D R M G+GL F++ FP R FDVGIAEQ
Sbjct: 319 VKPAAAKPTYTQVFGQWLCDQAAADERLVAITPAMREGSGLVEFEQQFPDRYFDVGIAEQ 378
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
HAVTFA GLA EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAG+VGADGPTH
Sbjct: 379 HAVTFAGGLACEGIKPVVAIYSTFLQRAYDQLVHDVALQNLPVLFAVDRAGIVGADGPTH 438
Query: 284 CGAFDTTFMACLPNMVV 300
G +D +F+ C+PNM+V
Sbjct: 439 AGLYDLSFLRCIPNMIV 455
>gi|241759455|ref|ZP_04757559.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria flavescens
SK114]
gi|241320237|gb|EER56570.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria flavescens
SK114]
Length = 629
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 149/377 (39%), Positives = 194/377 (51%), Gaps = 89/377 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMAV LG N
Sbjct: 91 MHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAVADKQLGNNR 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN----PQFRQ------- 94
+++I +GA A ++EA+N AG +LN + N P++
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVILNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 95 ---LCQEAFSSKDKKQKFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
L S K G M ++I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTIKAQSSKVLDKLPGAMELAQKVENKIKTLAGEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEK---------------AMLP------- 181
DGHN+E+L VLK ++ P L+HVIT+K A LP
Sbjct: 261 DGHNVENLVDVLKDLRGRKGPQ--LLHVITKKGNGYKFAENDPVKYHAVAKLPSEVPAQE 318
Query: 182 -----LKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQ 223
+K T++F + L D R M G+GL F++ FP R FDVGIAEQ
Sbjct: 319 VQPAVVKPTYTQVFGQWLCDQAAADERLIAITPAMREGSGLVEFEQQFPDRYFDVGIAEQ 378
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
HAVTFA GLA EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAG+VG+DGPTH
Sbjct: 379 HAVTFAGGLACEGIKPVVAIYSTFLQRAYDQLVHDVALQNLPVLFAIDRAGIVGSDGPTH 438
Query: 284 CGAFDTTFMACLPNMVV 300
G +D +F+ C+PNM++
Sbjct: 439 AGLYDLSFLRCVPNMII 455
>gi|407700673|ref|YP_006825460.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii str.
'Black Sea 11']
gi|407249820|gb|AFT79005.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii str.
'Black Sea 11']
Length = 626
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 145/367 (39%), Positives = 193/367 (52%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D F VGHSSTSISAGL GMAV + GKN
Sbjct: 95 MSTIRQKNGLHPFPWPPESDYDTFAVGHSSTSISAGL----------GMAVAAEKEGKNR 144
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
V++VI +GA A M++EA+N+AG + K + + ++ + R L
Sbjct: 145 KVVAVIGDGAMTAGMAFEALNHAGDIKKDMVVVLNDNEMSISENVGALNSHLARLLTGNF 204
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
F+S +D +K + I F+ E + FE+LG YIGP+DGH++ +
Sbjct: 205 FNSIRDGGKKLLSNVPPIKEFASRAEEHIKGMVVPGTIFEELGFNYIGPIDGHDVNAVVD 264
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ---------------------T 187
L+ ++ P L+HV+T+K K P+K +
Sbjct: 265 TLRNMRKFDGPQ--LLHVVTKKGKGYAVAEEDPIKFHAVPKFNPADNALPKSKPSAPTYS 322
Query: 188 RLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
+F K L D + M G+G+ F + FP + FDV IAEQHAVTF AGLA
Sbjct: 323 AIFGKWLCDMAAQDPKLMAVTPAMREGSGMVEFSQRFPEQYFDVAIAEQHAVTFGAGLAK 382
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EG+ AIYSSFLQR +DQ+ HDV +Q LPV FAIDRAG+VGADGPTH GAFD F+ C
Sbjct: 383 EGMNAVVAIYSSFLQRAYDQLIHDVAIQDLPVLFAIDRAGIVGADGPTHQGAFDIAFLRC 442
Query: 295 LPNMVVM 301
+PNMVVM
Sbjct: 443 IPNMVVM 449
>gi|313672240|ref|YP_004050351.1| 1-deoxy-d-xylulose-5-phosphate synthase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312938996|gb|ADR18188.1| 1-deoxy-D-xylulose-5-phosphate synthase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 620
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 193/371 (52%), Gaps = 87/371 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ GL E+ +DAFGVGHSSTSISAGL G+ V L K+
Sbjct: 90 TLRQFRGLSGFNKISESPYDAFGVGHSSTSISAGL----------GLKVAGTLQQKDIKT 139
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKALKRLH--------------SNPQFRQLCQEAFS 101
++VI +G+ A +++E +NNAG L + L + SN + + E ++
Sbjct: 140 VAVIGDGSMTAGIAFEGLNNAGHLKQNLVVILNDNEMSISPNVGALSNYLSKAMTGEIYT 199
Query: 102 S--------KDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGHNL 148
+K GG + F++++E G + F FE+LG YIGPV+GHN+
Sbjct: 200 KFRKDFQHFMEKSPILGGPLLH---FAKKLEEGVKGFFTPGIIFEELGFKYIGPVNGHNI 256
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAM---------------------LPLKLQQT 187
+DL L P VLIH+ T+K K +P+K
Sbjct: 257 KDLEEALHNAFIQTSP--VLIHINTKKGKGYEPAEKNPSKFHGVSKFDKSTGVPIKFSGE 314
Query: 188 RLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+ + +I M GTG+ + ++ +P R FDVGIAEQHAVTFAA
Sbjct: 315 KTYTQIFGETITEMASKNDKIVGITAAMPDGTGIAILKEAYPDRVFDVGIAEQHAVTFAA 374
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLAA GLKP+ AIYS+F QR +DQ+ HDV LQKLPV F +DRAG VG DGPTH GAFD +
Sbjct: 375 GLAAGGLKPYVAIYSTFSQRAYDQIIHDVALQKLPVVFCLDRAGFVGDDGPTHHGAFDLS 434
Query: 291 FMACLPNMVVM 301
F+ +PNMV+M
Sbjct: 435 FLRIVPNMVIM 445
>gi|198283750|ref|YP_002220071.1| deoxyxylulose-5-phosphate synthase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218665347|ref|YP_002426381.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198248271|gb|ACH83864.1| deoxyxylulose-5-phosphate synthase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218517560|gb|ACK78146.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 624
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 188/350 (53%), Gaps = 71/350 (20%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D+FG GHSSTSISAGL GMAV L K+ V+++I +GA A ++Y
Sbjct: 106 ESPYDSFGAGHSSTSISAGL----------GMAVAARLEHKSRQVVAIIGDGAMTAGLAY 155
Query: 71 EAINNAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE--------------- 115
EA+NN GVL+ L + ++ + S+ + G+++
Sbjct: 156 EALNNGGVLDADLLVVLNDNEMSISPNVGAVSRYLTRILSGRLYNTVREGAGQALSFVPP 215
Query: 116 IDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIH 170
+ +R+ E G + FE++G +Y GP+DGH+L+ L L+ +K I P L+H
Sbjct: 216 LRELARKAEEGVKGLVTPGALFEEMGFHYFGPIDGHDLDALIPTLENLKKIRGP--RLLH 273
Query: 171 VITEKEKAMLPLKLQQ--------------------------TRLFCKILDNR------- 197
VIT+K K P +L T++F L +
Sbjct: 274 VITKKGKGYGPAELDPCGYHGVTPFNRSDGRMAKKSAGAPSYTQVFGDWLCEKGAAEKHL 333
Query: 198 ------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRC 251
M G+GL F++ FP R FDVGIAEQHAVTFAAGLA +G+ P AIYS+FLQR
Sbjct: 334 VAITPAMREGSGLVRFEQLFPERYFDVGIAEQHAVTFAAGLACDGIHPVVAIYSTFLQRA 393
Query: 252 FDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
+DQ+ HDV +Q LPV FAIDRAGLVGADG TH GAFD + C+PN+V+M
Sbjct: 394 YDQLLHDVAIQNLPVLFAIDRAGLVGADGATHQGAFDIAYARCIPNLVIM 443
>gi|421559907|ref|ZP_16005774.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
92045]
gi|402334473|gb|EJU69761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
92045]
Length = 637
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 149/381 (39%), Positives = 195/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKQLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK +++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRSRKGPQ--LLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|421750542|ref|ZP_16187729.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Cupriavidus
necator HPC(L)]
gi|409770365|gb|EKN53062.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Cupriavidus
necator HPC(L)]
Length = 487
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 196/377 (51%), Gaps = 93/377 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G LG+
Sbjct: 90 MNTLRQWNGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMALGARTLGEQR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 140 VSIAVIGDGAMTAGMAFEAMNNAGVYKDLPLVVVLNDNDMSISPPVGALNRHLARLLSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K ++ + F++ E ++ A FE+ G YIGP+DG
Sbjct: 199 QFYA------ATKKGIERVLSVAPPVLEFAKRFEEHAKGMVVPATLFEEFGFNYIGPIDG 252
Query: 146 HNLEDLAYVLKQVK--AIPDPGAVLIHVITEK--------------------------EK 177
H+L+ L L+ ++ A+ G +HV+T+K
Sbjct: 253 HDLDSLVPTLQNIRRRALEGGGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPAEGIRP 312
Query: 178 AMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQH 224
A P + T++F + L D R+ G G+GL F++ FP R +DVGIAEQH
Sbjct: 313 AAKPARKTYTQVFGEWLCDQAAADPRLIGITPAMREGSGLVEFEQRFPDRYYDVGIAEQH 372
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFA G+A EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 373 AVTFAGGMACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHA 432
Query: 285 GAFDTTFMACLPNMVVM 301
GA+D ++ C+PNM+VM
Sbjct: 433 GAYDIPYLRCIPNMMVM 449
>gi|147677531|ref|YP_001211746.1| deoxyxylulose-5-phosphate synthase [Pelotomaculum thermopropionicum
SI]
gi|189027780|sp|A5D2Z6.1|DXS_PELTS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|146273628|dbj|BAF59377.1| deoxyxylulose-5-phosphate synthase [Pelotomaculum thermopropionicum
SI]
Length = 637
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 190/371 (51%), Gaps = 88/371 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+VHDAFG GHSSTSISA L GMA+ RDL G+ V
Sbjct: 91 TLRQFGGISGFPRPSESVHDAFGTGHSSTSISAAL----------GMAIARDLKGEKYSV 140
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKA--------------LKRLHSNPQFR 93
++VI +GA +++EA+N+AG VLN L RL ++P +
Sbjct: 141 VAVIGDGAMTGGIAFEALNHAGHLKCNLIVVLNDNEMSIAQNVGAMSGYLTRLRTDPMYS 200
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+ +E ++ G + + D+ + G FE+LG Y+GPVDGH+L
Sbjct: 201 R-GKEEIEQLLRRIPIGSALLRLGERVKDSLKYLVVPG---MIFEELGFTYLGPVDGHDL 256
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL------------------- 189
+ VL+ +A P VL+HV+T+K K P + R
Sbjct: 257 RAITTVLQHARARKGP--VLVHVLTKKGKGYSPAESNPDRFHGIGAFDVATGEAVKKSNI 314
Query: 190 -------------FCKILDNR------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+ DN M GGTGL F + +P R FDVGIAEQHAVT AA
Sbjct: 315 PTYTEVFGRTMVKLAREFDNMLAITAAMTGGTGLTEFARLYPKRFFDVGIAEQHAVTLAA 374
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A G +P AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAG+VG DG TH G FD +
Sbjct: 375 GMATGGFRPVVAIYSTFLQRAYDQILHDVCLQNLPVTFAIDRAGIVGEDGATHHGLFDFS 434
Query: 291 FMACLPNMVVM 301
++ +PNMV+M
Sbjct: 435 YLRPIPNMVIM 445
>gi|94311551|ref|YP_584761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus metallidurans
CH34]
gi|118595608|sp|Q1LK34.1|DXS_RALME RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|93355403|gb|ABF09492.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
FAD-requiring [Cupriavidus metallidurans CH34]
Length = 637
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 146/377 (38%), Positives = 195/377 (51%), Gaps = 93/377 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G G+
Sbjct: 90 MSTLRQYGGISGFPRRAESEYDTFGTAHSSTSISAAL----------GMALGARTRGEKR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LNK L RL S
Sbjct: 140 VGIAVIGDGAMTAGMAFEAMNNAGVYKDLPMLVVLNDNDMSISPPVGMLNKHLARLMSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K +K + F++ +E ++ A FE+ G Y+GP+DG
Sbjct: 199 QFYA------ATKKGIEKVLSVAPPVLEFAKRLEEHAKGMVVPATLFEEFGFDYVGPIDG 252
Query: 146 HNLEDLAYVLKQVK--AIPDPGAVLIHVITEK--------------------------EK 177
H+LE L L+ ++ A+ G +HV+T+K
Sbjct: 253 HDLESLVPTLQNIRQRALEGHGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPAEGIRP 312
Query: 178 AMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQH 224
+ P + T++F + L D R+ G G+G+ F+K FP R +DVGIAEQH
Sbjct: 313 SAKPSRKTYTQVFGEWLCDMAAADKRLIGVTPAMREGSGMVEFEKRFPDRYYDVGIAEQH 372
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 373 AVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHA 432
Query: 285 GAFDTTFMACLPNMVVM 301
G +D F+ C+PNM+VM
Sbjct: 433 GVYDIPFLRCIPNMMVM 449
>gi|395760865|ref|ZP_10441534.1| 1-deoxy-D-xylulose-5-phosphate synthase [Janthinobacterium lividum
PAMC 25724]
Length = 622
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 188/372 (50%), Gaps = 89/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA + G
Sbjct: 88 MHTLRQKDGISGFPKRDESEYDTFGTAHSSTSISAAL----------GMAQAAKIKGDPL 137
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
H I+VI +G+ A M++EA+NNAGV LN+ L RL S
Sbjct: 138 HAIAVIGDGSMTAGMAFEAMNNAGVQEDVNLLVILNDNDMSISPPVGALNRHLARLMSG- 196
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS--RACFFEDLGLYYIGPVDGHNL 148
QF A + K G + E+ E G A FE+ G YIGP+DGH+L
Sbjct: 197 QFY-----AAAKNVGKSVLPGPVLELAKRFEEHAKGMVVPATMFEEFGFNYIGPIDGHDL 251
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAMLPL 182
+ L L+ +K + P +HV+T+K + A P
Sbjct: 252 DSLIPTLQNIKQLKGP--QFLHVVTKKGQGYKLAEAQPILYHGTGKFNPAEGIKPATAPA 309
Query: 183 KLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
K+ T +F L D R+ G G+G+ F++ FP R FDVGIAEQH+VTF
Sbjct: 310 KMTYTEVFGNWLCDMATHDKRLVGITPAMREGSGMVKFEQQFPNRYFDVGIAEQHSVTFG 369
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EGLKP AIYS+FLQR +DQ+ HDV LQ L V FA+DRAGLVGADG TH G +D
Sbjct: 370 AGLACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDM 429
Query: 290 TFMACLPNMVVM 301
F+ C+PNMVVM
Sbjct: 430 AFLRCIPNMVVM 441
>gi|389793448|ref|ZP_10196615.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodanobacter fulvus Jip2]
gi|388434194|gb|EIL91143.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodanobacter fulvus Jip2]
Length = 630
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 141/367 (38%), Positives = 186/367 (50%), Gaps = 82/367 (22%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ GL E+ +D FGVGHSSTSISA L GMA+ G + V
Sbjct: 96 TIKKKDGLAPFPRRAESEYDTFGVGHSSTSISAAL----------GMAIAAQRQGDHRKV 145
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
++VI +GA A M++EA+N N G L K + R ++ +
Sbjct: 146 VAVIGDGAMTAGMAFEALNHGGDVEPDMLVVFNDNGMSISENVGALTKMMARAMASQRLN 205
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAY 153
+ + A + K+ FG + ++ + S FE+LG +Y GP+DGHN+ L
Sbjct: 206 EWRERAKRAIPKQSFFGRLFKNWEEHAKGMFVPS--TLFEELGFHYTGPIDGHNMPQLLQ 263
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------------------T 187
L+ VK +P P L+HV+T K K P + Q T
Sbjct: 264 ALRTVKQLPGPQ--LLHVVTTKGKGYAPAEQAQIKYHAVGPFDPQAGLAKKAAAAKPTYT 321
Query: 188 RLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
+F L D+R M G+GL F K +P R FDV IAEQHAVT AAG+A
Sbjct: 322 DIFGDWLCDMAAADSRLLAITPAMREGSGLVRFSKEYPQRYFDVAIAEQHAVTLAAGMAC 381
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EG KP AIYS+FLQR +DQ HDV LQ L V FAIDRAG+VG DG TH G+FD TF+ C
Sbjct: 382 EGAKPVVAIYSTFLQRAYDQAIHDVALQNLDVTFAIDRAGVVGPDGATHAGSFDLTFLRC 441
Query: 295 LPNMVVM 301
LP+MV+M
Sbjct: 442 LPHMVIM 448
>gi|445494923|ref|ZP_21461967.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Janthinobacterium sp.
HH01]
gi|444791084|gb|ELX12631.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Janthinobacterium sp.
HH01]
Length = 623
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 190/372 (51%), Gaps = 89/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA + G++
Sbjct: 88 MHTLRQLNGISGFPKRDESEYDTFGTAHSSTSISAAL----------GMAQAAKIKGEHR 137
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
H I+VI +G+ A M++EA+NNAGV LN+ L RL S
Sbjct: 138 HAIAVIGDGSMTAGMAFEALNNAGVQEDLNLLVILNDNDMSISPPVGALNRYLARLMSG- 196
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS--RACFFEDLGLYYIGPVDGHNL 148
QF A + K G + E+ E G A FE+ G YIGP+DGH+L
Sbjct: 197 QFY-----AAAKNVGKSVLPGPVLELAKRLEEHAKGMVVPATMFEEFGFNYIGPIDGHDL 251
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAMLPL 182
E L L+ +K + P +HV+T+K + A P
Sbjct: 252 ESLVPTLQNIKQLKGP--QFLHVVTKKGQGYKLAEAEPVLYHGTPKFNPAEGIKPAAAPG 309
Query: 183 KLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
K+ T +F L D ++ G G+G+ F++ +P R FDVGIAEQHAVTF
Sbjct: 310 KMSYTDVFGNWLCDMAAADKKLVGITPAMREGSGMVRFEQEYPDRYFDVGIAEQHAVTFG 369
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EGLKP AIYS+FLQR +DQ+ HDV LQ L V FA+DRAGLVGADG TH G +D
Sbjct: 370 AGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDL 429
Query: 290 TFMACLPNMVVM 301
++ C+PNMVVM
Sbjct: 430 AYLRCIPNMVVM 441
>gi|430809187|ref|ZP_19436302.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus sp. HMR-1]
gi|429498331|gb|EKZ96841.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus sp. HMR-1]
Length = 637
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 146/377 (38%), Positives = 195/377 (51%), Gaps = 93/377 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G G+
Sbjct: 90 MSTLRQYGGISGFPRRAESEYDTFGTAHSSTSISAAL----------GMALGARTRGEKR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LNK L RL S
Sbjct: 140 VGIAVIGDGAMTAGMAFEAMNNAGVYKDLPMLVVLNDNDMSISPPVGMLNKHLARLMSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K +K + F++ +E ++ A FE+ G Y+GP+DG
Sbjct: 199 QFYA------ATKKGIEKVLSVAPPVLEFAKRLEEHAKGMVVPATLFEEFGFDYVGPIDG 252
Query: 146 HNLEDLAYVLKQVK--AIPDPGAVLIHVITEK--------------------------EK 177
H+LE L L+ ++ A+ G +HV+T+K
Sbjct: 253 HDLESLVPTLQNIRQRALEGHGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPAEGIRP 312
Query: 178 AMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQH 224
+ P + T++F + L D R+ G G+G+ F+K FP R +DVGIAEQH
Sbjct: 313 SAKPSRKTYTQVFGEWLCDMAAADKRLIGVTPAMREGSGMVEFEKRFPDRYYDVGIAEQH 372
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 373 AVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHA 432
Query: 285 GAFDTTFMACLPNMVVM 301
G +D F+ C+PNM+VM
Sbjct: 433 GVYDIPFLRCIPNMMVM 449
>gi|402569608|ref|YP_006618952.1| deoxyxylulose-5-phosphate synthase [Burkholderia cepacia GG4]
gi|402250805|gb|AFQ51258.1| deoxyxylulose-5-phosphate synthase [Burkholderia cepacia GG4]
Length = 634
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 196/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G L G +
Sbjct: 89 MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIGSQLNGDDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 139 FSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISPPVGALNRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + E+ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLSVAPPVLEL---ARKLEEHAKGMVVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++ + P +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIRELRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K F R +DVGIAEQHAV
Sbjct: 310 TPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA G+A EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH GA
Sbjct: 370 TFAGGMATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGA 429
Query: 287 FDTTFMACLPNMVVM 301
+D FM C+PNM +M
Sbjct: 430 YDLAFMRCIPNMTIM 444
>gi|339326732|ref|YP_004686425.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus necator N-1]
gi|338166889|gb|AEI77944.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Cupriavidus necator
N-1]
Length = 638
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 146/377 (38%), Positives = 193/377 (51%), Gaps = 93/377 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G LG+
Sbjct: 90 MGTLRQWGGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMALGARTLGEKR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
++VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 140 VSVAVIGDGAMTAGMAFEALNNAGVYKDLPLVVVLNDNDMSISPPVGALNRHLARLLSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K +K + F++ E ++ A FE+ G YIGP+DG
Sbjct: 199 QFYA------ATKKGIEKVLSVAPPVLEFAKRFEEHAKGMMVPATLFEEFGFNYIGPIDG 252
Query: 146 HNLEDLAYVLKQVK--AIPDPGAVLIHVITEK--------------------------EK 177
H+L L L ++ A+ G +HV+T+K
Sbjct: 253 HDLNSLVPTLLNIRQRALEGAGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPAEGIRP 312
Query: 178 AMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQH 224
A P + T++F L D R+ G G+G+ F+K FP R +DVGIAEQH
Sbjct: 313 AAKPARKTYTQVFGDWLCDMAAADKRLVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQH 372
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 373 AVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHA 432
Query: 285 GAFDTTFMACLPNMVVM 301
GA+D ++ C+PNM+VM
Sbjct: 433 GAYDIAYLRCIPNMMVM 449
>gi|297537808|ref|YP_003673577.1| deoxyxylulose-5-phosphate synthase [Methylotenera versatilis 301]
gi|297257155|gb|ADI29000.1| deoxyxylulose-5-phosphate synthase [Methylotenera versatilis 301]
Length = 627
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/366 (36%), Positives = 193/366 (52%), Gaps = 77/366 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+++R G+ E+ +D FG GHSSTSISA L GMAV G
Sbjct: 94 MQSLRNPQGIAGFPRRSESEYDTFGTGHSSTSISAAL----------GMAVAAQKAGLER 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHS-------------NPQFRQLCQEAF 100
+++I +GA A M++EA+NNAG ++ L + + N +L F
Sbjct: 144 RAVAIIGDGAMTAGMAFEALNNAGDMDANLLVILNDNDMSISNNVGALNNYLAKLLSSRF 203
Query: 101 SSKDKK--QKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
+K +K + + F++ E + FE+ G YIGP+DGH+++ L
Sbjct: 204 YGTVRKSGKKVLSAVPHVMEFAKRAEEHVKGMVTPGTLFEEFGFNYIGPIDGHDMDALID 263
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLP-------------------------LKLQQTR 188
L +K + P +H++T+K K P K T+
Sbjct: 264 TLSNIKQLKGPQ--FLHIVTQKGKGFEPAEDNPNKFHGVGKFDPFNGDALTSNTKKTYTQ 321
Query: 189 LFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAE 235
+F + L DNR+ G G+GLN F + +P R +DVGIAEQH++TFAAG+A +
Sbjct: 322 VFGEWLVDMAALDNRLIGITPAMCDGSGLNAFAEKYPDRYYDVGIAEQHSLTFAAGMACD 381
Query: 236 GLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACL 295
GLKP AIYS+FLQR +DQ+ HD+ LQ LPV FAIDRAGLVGADGPTH G+FD +++ C+
Sbjct: 382 GLKPVVAIYSTFLQRAYDQLIHDIALQNLPVLFAIDRAGLVGADGPTHAGSFDLSYLRCI 441
Query: 296 PNMVVM 301
PN+V+M
Sbjct: 442 PNIVIM 447
>gi|193213336|ref|YP_001999289.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chlorobaculum parvum NCIB
8327]
gi|193086813|gb|ACF12089.1| deoxyxylulose-5-phosphate synthase [Chlorobaculum parvum NCIB 8327]
Length = 642
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 187/377 (49%), Gaps = 90/377 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T R+ GL E+ HDAF GH+STSISA GMAV RDL G++
Sbjct: 100 MDTNRRYNGLAGFPKRSESAHDAFDTGHASTSISAA----------AGMAVARDLAGRSE 149
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
V+++I +G+ M++EA+N + G LN L L N
Sbjct: 150 KVVAIIGDGSLTGGMAFEAMNHLGDVKSDVLVILNDNQMAISPSTGGLNNYLVNLPLNKT 209
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+ +L + + S G+ + A R +E G +A F FE LG Y GP+DGH
Sbjct: 210 YNKLRKFVWDSISLMHNDIGETAKT-AVHR-LEDGIKAAFTPGAYFEALGFRYFGPIDGH 267
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRLFCKI------------- 193
N+E L L +++++P P L+HVIT+K K P + Q +
Sbjct: 268 NMEQLTKALSEMRSLPHPK--LLHVITKKGKGFKPAEENQPKWHASAGGFDIETGANLKA 325
Query: 194 -----------------------------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQH 224
+ M GT L+LFQ+ P R FDVGIAEQH
Sbjct: 326 PGKPAKPKYQEVFGEALVELALKDQTITAITAAMPSGTSLDLFQQAIPSRFFDVGIAEQH 385
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTF AGLA G KP CAIYS+FLQR +DQ+ HDV LQ L V FAIDRAGLVG DGPTH
Sbjct: 386 AVTFCAGLALGGFKPVCAIYSTFLQRGYDQLIHDVALQNLHVVFAIDRAGLVGEDGPTHH 445
Query: 285 GAFDTTFMACLPNMVVM 301
GAFD +++ +PN+ +M
Sbjct: 446 GAFDLSYLNAVPNLTIM 462
>gi|304316767|ref|YP_003851912.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778269|gb|ADL68828.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 618
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/352 (38%), Positives = 187/352 (53%), Gaps = 73/352 (20%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+VHD F GHSSTSISA L G+A RDL + VISVI +GA M++
Sbjct: 103 ESVHDIFETGHSSTSISAAL----------GIAKARDLNNEKYSVISVIGDGALTGGMAF 152
Query: 71 EAINNAG--------VLNKA--------------LKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+N+AG +LN L +L ++P + +L ++ + +
Sbjct: 153 EALNDAGRSKTNLIVILNHNEMSISKNVGSLSLYLSKLRTDPNYFKLKRDLENILNLIPP 212
Query: 109 FGGQMHE-IDAFSREI-EAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGA 166
G +H+ I+ I + FFE++G Y+GP+DGH+L+ L VLK+ K + P
Sbjct: 213 IGKSIHKSIEKIKDSIKQLFVPGMFFEEMGFTYLGPIDGHDLDSLIDVLKRAKKMEGP-- 270
Query: 167 VLIHVITEKEK-------------AMLPLKLQQ-----------TRLFCKILDN------ 196
+ IHVIT+K K + +P + + +F K L +
Sbjct: 271 IFIHVITKKGKGYVFAEENPDKFHSAVPFNINTGEFKKKNYDTYSDVFGKTLTDLATKND 330
Query: 197 -------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQ 249
M GTGLN F + FP R +DVGIAEQHA TFAAG+A G KP+ A+YS+FLQ
Sbjct: 331 KIVAITAAMPDGTGLNYFAEKFPNRFYDVGIAEQHAATFAAGMAINGYKPYFAVYSTFLQ 390
Query: 250 RCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
R FDQV HD+ +Q LPV AIDRAGLVG DG TH G FD +F+ +PNM +M
Sbjct: 391 RAFDQVIHDICIQNLPVVLAIDRAGLVGEDGETHQGVFDVSFLRMIPNMTIM 442
>gi|187929505|ref|YP_001899992.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia pickettii 12J]
gi|309781718|ref|ZP_07676451.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. 5_7_47FAA]
gi|404396620|ref|ZP_10988414.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. 5_2_56FAA]
gi|229836074|sp|B2U930.1|DXS_RALPJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|187726395|gb|ACD27560.1| deoxyxylulose-5-phosphate synthase [Ralstonia pickettii 12J]
gi|308919359|gb|EFP65023.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. 5_7_47FAA]
gi|348610583|gb|EGY60271.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. 5_2_56FAA]
Length = 636
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 197/377 (52%), Gaps = 93/377 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G G++
Sbjct: 90 MGSLRQLDGISGFPRRSESPYDTFGTAHSSTSISAAL----------GMALGAKTKGEDR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 140 VAIAVIGDGAMSAGMAFEAMNNAGVYKDLPLVVVLNDNDMSISPPVGALNRYLARLMSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDG 145
QF ++K +K + F++ E ++ F FE+ G YIGP+DG
Sbjct: 199 QFYA------ATKKGVEKLLSVAPPVLEFAKRFEEHTKGMFVPATMFEEFGFNYIGPIDG 252
Query: 146 HNLEDLAYVLKQVK--AIPDPGAVLIHVITEK--------------------------EK 177
H+LE L L+ ++ A G +HV+T+K +
Sbjct: 253 HDLESLVPTLQNIRQRAREGGGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPQEGIKP 312
Query: 178 AMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQH 224
+ P K+ T++F + L D R+ G G+G+ F++ FP R +DVGIAEQH
Sbjct: 313 SGRPAKVTYTQVFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQH 372
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 373 AVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHA 432
Query: 285 GAFDTTFMACLPNMVVM 301
GA+D ++ C+PNM+VM
Sbjct: 433 GAYDIAYLRCIPNMMVM 449
>gi|407940295|ref|YP_006855936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. KKS102]
gi|407898089|gb|AFU47298.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. KKS102]
Length = 631
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 194/371 (52%), Gaps = 92/371 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+V+D FG HSSTSISA L GMA+ G N
Sbjct: 93 MHTLRQLGGISGFPQRAESVYDTFGTAHSSTSISAAL----------GMALAAKRKGDNR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
H +++I +GA A M++EA+NNAGV LN+ L +L S Q
Sbjct: 143 HAVAIIGDGAMSAGMAFEALNNAGVADCNLLVVLNDNDMSISPPVGALNRYLAQLMSG-Q 201
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGH 146
F ++K+ + + + F++ E ++ A FE G YIGP+DGH
Sbjct: 202 FYA------AAKNVGKTVLRPVPPLLEFAKRFEQQAKGMVVPATLFEKFGFNYIGPIDGH 255
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAML 180
+L+ L L+ +K++ P +HV+T+K K
Sbjct: 256 DLDSLIPTLENIKSLKGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPSVGLTKPAT 313
Query: 181 PLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVT 227
P K T++F + L D R+ G G+G+ F+K FP R +DVGIAEQHAVT
Sbjct: 314 PPKQTFTQVFGQWLCDMAAQDPRLVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVT 373
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAG+A EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+
Sbjct: 374 FAAGMACEGVKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 433
Query: 288 DTTFMACLPNM 298
D F+ C+PNM
Sbjct: 434 DIPFVRCIPNM 444
>gi|333985135|ref|YP_004514345.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylomonas methanica
MC09]
gi|333809176|gb|AEG01846.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylomonas methanica
MC09]
Length = 620
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 195/368 (52%), Gaps = 79/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+TIR G+ E+ +DAFGVGHSSTSISA L GMA+ L G++
Sbjct: 94 MQTIRTLGGVSAFPSRDESEYDAFGVGHSSTSISAAL----------GMAIASQLRGEDK 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQF--------RQLCQEA 99
++++I +G+ M+YEA+N+AG +N L + +P + L +
Sbjct: 144 KMVAIIGDGSITGGMAYEAMNHAGDVNANLLVILNDNDMSISPPVGAMNNYLTKVLSSKL 203
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
+SS +++ +K M + +R+ E + FE+LG Y GP+DGH++ L
Sbjct: 204 YSSVREESKKALASMPSVWELARKTEEHVKGMIVPGTLFEELGFNYFGPIDGHDVAMLVS 263
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------------------- 186
L+++K I P V +HV+T+K K P +
Sbjct: 264 TLEKLKDISGP--VFLHVVTKKGKGYAPAEKDPLAYHGVPAFDPSKDSLPKSAPSPHPTY 321
Query: 187 TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F L D R+ G G+GL F + FP R FDV IAEQHAVT AAG A
Sbjct: 322 TEVFGNWLCDMAAQDERLLGITPAMREGSGLVKFSQQFPKRYFDVAIAEQHAVTLAAGQA 381
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
+G KP AIYS+FLQR +DQ+ HDV LQKL V FA+DRAGLVG DGPTH G++D ++M
Sbjct: 382 CQGAKPVVAIYSTFLQRAYDQLIHDVALQKLDVLFALDRAGLVGPDGPTHAGSYDFSYMR 441
Query: 294 CLPNMVVM 301
C+PNM+VM
Sbjct: 442 CIPNMLVM 449
>gi|389805985|ref|ZP_10203128.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodanobacter thiooxydans
LCS2]
gi|388446439|gb|EIM02472.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodanobacter thiooxydans
LCS2]
Length = 629
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 188/372 (50%), Gaps = 92/372 (24%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ GL E+ +D FGVGHSSTSISA L GMA+ G + V
Sbjct: 96 TIKKKDGLAPFPRREESEYDTFGVGHSSTSISAAL----------GMAIAAQRKGDHRKV 145
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
++VI +GA A M++EA+N N G L K + R ++ +
Sbjct: 146 VAVIGDGAMTAGMAFEALNHGGDVEPDMLVVFNDNGMSISENVGALTKMMARAMASRRLN 205
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGHNL 148
+ + A + KQ F G+ + + E ++ F FE+LG +Y GP+DGHN+
Sbjct: 206 AVRERAKRAI-PKQSFAGR------WFKRWEEHTKGMFVPSTLFEELGFHYTGPIDGHNI 258
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
L L+ VK +P P L+HVIT K K P + Q
Sbjct: 259 PQLLQALRTVKNLPGP--QLLHVITTKGKGYAPAEQAQIEYHAVGPFDPEAGVVKKPAPA 316
Query: 187 ----TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F L D R+ G G+GL F K +P R FDV IAEQHAVT A
Sbjct: 317 RPTYTDIFSDWLCDQAAADERLLGITPAMREGSGLVQFSKEYPERYFDVAIAEQHAVTLA 376
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AG+A EG KP AIYS+FLQR +DQ HDV LQ L V FAIDRAG+VG DG TH G+FD
Sbjct: 377 AGMACEGAKPVVAIYSTFLQRAYDQAIHDVALQNLDVTFAIDRAGVVGPDGATHSGSFDL 436
Query: 290 TFMACLPNMVVM 301
T++ CLPNMV+M
Sbjct: 437 TYLRCLPNMVIM 448
>gi|404482801|ref|ZP_11018026.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridiales bacterium
OBRC5-5]
gi|404343891|gb|EJZ70250.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridiales bacterium
OBRC5-5]
Length = 625
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 186/356 (52%), Gaps = 80/356 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ D F GHSSTS+SAGL GMA GRD+ G+N VISVI +GA M+Y
Sbjct: 104 ESKFDVFNTGHSSTSLSAGL----------GMAFGRDIKGENYRVISVIGDGALTGGMAY 153
Query: 71 EAINNA----------------------GVLNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNA G +N L + + + L + +S ++
Sbjct: 154 EALNNAAQIKKNFIMVLNDNEMSISKNVGGMNDYLNNIRTADGYNNLKKRVVNSLERLPY 213
Query: 109 FGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
G M ID+ R+ + G + FE++G+ Y+GPVDGHN+ L V ++ K +
Sbjct: 214 IGKPM--IDSI-RQTKNGIKQILIPGMLFENMGVTYLGPVDGHNITALLKVFEEAKKVEG 270
Query: 164 PGAVLIHVITEKEKAMLPL-------------------------KLQQTRLFCKIL---- 194
P VL+HV+T+K K P K T +F K +
Sbjct: 271 P--VLVHVLTKKGKGYSPAENHPENFHGIGAFDIASGNAKSGSKKPTYTDVFSKKIVELA 328
Query: 195 -DNR--------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS 245
+N+ M G GL F+ FP R FDVGIAEQHA+T AAGLAA GL P +YS
Sbjct: 329 SENKDIVAITAAMPEGCGLLDFKNKFPKRFFDVGIAEQHAITSAAGLAASGLTPVVCVYS 388
Query: 246 SFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
SFLQR FDQ+ HDV LQ L V FAIDRAGLVGADG TH G FD +F++C+PNM ++
Sbjct: 389 SFLQRGFDQIVHDVCLQNLHVVFAIDRAGLVGADGETHQGIFDVSFLSCIPNMTLL 444
>gi|39995792|ref|NP_951743.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
PCA]
gi|409911234|ref|YP_006889699.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
KN400]
gi|81703187|sp|Q74FC3.1|DXS1_GEOSL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
synthase 1; Short=DXPS 1
gi|39982556|gb|AAR34016.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
PCA]
gi|298504800|gb|ADI83523.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
KN400]
Length = 637
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 184/354 (51%), Gaps = 75/354 (21%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ HDAF GHSSTSISAGL GMA+ R+L G +N V++VI +G+ +++
Sbjct: 106 ESSHDAFDTGHSSTSISAGL----------GMAMARELRGGSNKVVAVIGDGSMTGGIAF 155
Query: 71 EAINNAGVLNKAL-KRLHSNPQFRQLCQEAFSS-----------KDKKQKFGGQMHEIDA 118
EA+N AG L K L L+ N AFSS ++ K++ G + I A
Sbjct: 156 EALNQAGHLKKNLIVVLNDNEMSISPNVGAFSSFVSRKLTGSYFRELKKEVQGLLQNIPA 215
Query: 119 FSREIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGA 166
++I +R FE LG YIGP+ GHNL L V + + + P
Sbjct: 216 IGKDILQFARRAENSLKGFLTPGMLFEALGFDYIGPIQGHNLPQLLEVFENARGLDGP-- 273
Query: 167 VLIHVITEKEKAMLPLKLQQ--------------------------TRLFCKIL-----D 195
V++HV+T K K +P + T +F L +
Sbjct: 274 VVVHVMTTKGKGYVPAETNPSAFHGVGPFDVATGKTTGSKPGAASYTGIFGDTLAQLARE 333
Query: 196 NR--------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSF 247
N M GTGL F K FP R FDVGIAEQHAVTFAAGLAAEG +P AIYS+F
Sbjct: 334 NEKIVAITAAMPDGTGLTGFAKEFPERFFDVGIAEQHAVTFAAGLAAEGFRPVTAIYSTF 393
Query: 248 LQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
LQR +DQV HDV LQ LPV FA+DR G+VG DGPTH G FD +++ LP M +M
Sbjct: 394 LQRAYDQVFHDVCLQNLPVVFALDRGGVVGDDGPTHHGVFDLSYLRHLPGMTLM 447
>gi|291279337|ref|YP_003496172.1| 1-deoxy-D-xylulose-5-phosphate synthase [Deferribacter
desulfuricans SSM1]
gi|290754039|dbj|BAI80416.1| 1-deoxy-D-xylulose-5-phosphate synthase [Deferribacter
desulfuricans SSM1]
Length = 618
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 141/369 (38%), Positives = 196/369 (53%), Gaps = 85/369 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+ +DAFGVGH+STS+SA L G+ V D+L N +
Sbjct: 88 TLRQFKGISGFNKPAESKYDAFGVGHTSTSVSAAL----------GLRVANDILNLNRKI 137
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEAFS 101
++VI +GA A +++E +NN G L+K + + ++ + R + E ++
Sbjct: 138 VAVIGDGALTAGLAFEGLNNLGHLDKDMIVILNDNEMSISKNVGAISSYLSRAMTGEFYT 197
Query: 102 --SKD-----KKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGHNLE 149
KD + G ++ ++ +++ E G + F FE+LGL YIGP+DGHNL+
Sbjct: 198 HFRKDVQSILEHAPLGDKLLKM---AKKFEEGLKGFFTPGILFEELGLKYIGPIDGHNLK 254
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL-------------------- 189
+L L K I D G LIHVIT+K K P + +
Sbjct: 255 ELDKALHNAK-IQD-GPTLIHVITKKGKGYKPAEENPEKFHGISSFDIKTGKPIKFSGKT 312
Query: 190 FCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
F ++ + M GTGL F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 313 FTEVFGEKIIEMAEKHKNIVAITAAMKPGTGLTKFAEKFPDRFFDVGIAEQHAVTFAAGL 372
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
A G KP+ AIYS+FLQR +DQ+ HDV LQ LPV F IDR GLVGADGPTH GAFD +++
Sbjct: 373 AISGCKPYVAIYSTFLQRAYDQIIHDVALQNLPVTFCIDRGGLVGADGPTHHGAFDISYL 432
Query: 293 ACLPNMVVM 301
+PN+ +M
Sbjct: 433 RTIPNIHIM 441
>gi|226941242|ref|YP_002796316.1| 1-deoxy-D-xylulose-5-phosphate synthase [Laribacter hongkongensis
HLHK9]
gi|254782077|sp|C1DAW8.1|DXS_LARHH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|226716169|gb|ACO75307.1| Dxs [Laribacter hongkongensis HLHK9]
Length = 622
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 145/367 (39%), Positives = 192/367 (52%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +D FGVGHSSTSI A L GMAV G +
Sbjct: 91 MHTMRQKGGLAGFPKRDESEYDTFGVGHSSTSIGAAL----------GMAVAARQTGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSNP-----QFRQLCQEAF 100
V+++I +GA A ++EA+NNAG +LN + N F +L F
Sbjct: 141 RVVAIIGDGAMTAGQAFEALNNAGDSDTDLLVILNDNDMSISPNVGALNHYFTRLMSGRF 200
Query: 101 --SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAY 153
+ K + G + + + E + A FE+ G Y+GPVDGH+L L
Sbjct: 201 YATMKSGTNRVLGMAPPLQKLAHKAEEQVKGLLTPATLFEEFGFNYLGPVDGHDLGVLVN 260
Query: 154 VLKQVKAIPDPGAVLIHVITEK-------EKAMLPL-------------------KLQQT 187
L+ ++ + P +HV+T+K EK + K T
Sbjct: 261 TLQNIRQLKGP--QFLHVVTKKGHGYKLAEKDPISYHGVSKFSPENGLVSKSGSSKPGYT 318
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F L D R+ G G+G+ F+K +P R FDVGIAEQHAVTFAAG+A
Sbjct: 319 QVFGDWLCDMAAQDERLVGITPAMREGSGMVRFEKEYPDRYFDVGIAEQHAVTFAAGMAC 378
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
+GLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADGPTH GAFD +++ C
Sbjct: 379 DGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGPTHAGAFDLSYLRC 438
Query: 295 LPNMVVM 301
+PNMVVM
Sbjct: 439 IPNMVVM 445
>gi|261378199|ref|ZP_05982772.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria cinerea ATCC
14685]
gi|269145669|gb|EEZ72087.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria cinerea ATCC
14685]
Length = 637
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 147/381 (38%), Positives = 196/381 (51%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R+ GL E+ +DAFGVGHSSTSI A L GMA +LG +
Sbjct: 91 MHTMRRYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAAADKILGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN----PQF--------- 92
+++I +GA A ++EA+N AG +LN + N P++
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 93 RQLCQEAFSSKDKK-QKFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
R L + K K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 RGLLSTIKAQSSKVLDKLPGAMELAQKVEHKIKTLAGEAEHARQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-----------------------EKAML 180
DGHN+E L VLK +++ P L+HVIT+K A
Sbjct: 261 DGHNVEHLVDVLKDLRSRKGPQ--LLHVITKKGNGYKLAENDPVKYHAVANLPKDSTAET 318
Query: 181 PL--------KLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVG 219
P+ K T++F K L D+R+ G+GL F++ FP R FDVG
Sbjct: 319 PMPSENKPAAKPTYTQVFGKWLCDQAAADSRLAAITPAMREGSGLVEFEQQFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|433654911|ref|YP_007298619.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293100|gb|AGB18922.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 618
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/352 (38%), Positives = 187/352 (53%), Gaps = 73/352 (20%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+VHD F GHSSTSISA L G+A RDL + VISVI +GA M++
Sbjct: 103 ESVHDIFETGHSSTSISAAL----------GIAKARDLNNEKYSVISVIGDGALTGGMAF 152
Query: 71 EAINNAG--------VLNKA--------------LKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+N+AG +LN L +L ++P + +L ++ + +
Sbjct: 153 EALNDAGRSKTNLIVILNHNEMSISKNVGSLSLYLSKLRTDPNYFKLKRDLENILNLIPP 212
Query: 109 FGGQMHE-IDAFSREI-EAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGA 166
G +H+ I+ I + FFE++G Y+GP+DGH+L+ L VLK+ K + P
Sbjct: 213 IGKSIHKSIEKIKDSIKQLFVPGMFFEEMGFTYLGPIDGHDLDSLIDVLKRAKKMEGP-- 270
Query: 167 VLIHVITEKEK-------------AMLPLKLQQ-----------TRLFCKILDN------ 196
+ IHVIT+K K + +P + + +F K L +
Sbjct: 271 IFIHVITKKGKGYVFAEENPDKFHSAVPFNINTGEFKKKNYDTYSDVFGKTLTDLATKND 330
Query: 197 -------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQ 249
M GTGLN F + FP R +DVGIAEQHA TFAAG+A G KP+ A+YS+FLQ
Sbjct: 331 KIVAITAAMPDGTGLNYFAEKFPNRFYDVGIAEQHAATFAAGMAINGYKPYFAVYSTFLQ 390
Query: 250 RCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
R FDQV HD+ +Q LPV AIDRAGLVG DG TH G FD +F+ +PNM +M
Sbjct: 391 RAFDQVIHDICIQNLPVVLAIDRAGLVGEDGETHQGVFDVSFLRMIPNMTIM 442
>gi|297544574|ref|YP_003676876.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842349|gb|ADH60865.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 620
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 141/370 (38%), Positives = 195/370 (52%), Gaps = 86/370 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+R+ GL E+VHD FG GHSSTSISA L G+A RDL G+ V
Sbjct: 88 TLRKFNGLSGFTKRTESVHDVFGAGHSSTSISAAL----------GIAKARDLKGEKYSV 137
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKA--------------LKRLHSNPQFR 93
++VI +GA M+ EA+N+AG VLN L +L ++P +
Sbjct: 138 VAVIGDGALTGGMALEALNDAGRSETNLIVVLNHNEMSISENVGSLSLYLSKLRTDPTYN 197
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+L QE + + G +H+ D+ + + G FFE++G Y+GP+DGH++
Sbjct: 198 KLKQEVDNLLNIVPPIGKSLHKYLEKIKDSVKQLVVPG---MFFEEMGFTYLGPIDGHDV 254
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEK-------------AMLPLKLQQTR------- 188
L VL++ K + P +LIHV+T+K K + P +Q +
Sbjct: 255 GGLIEVLERAKRMKGP--ILIHVVTKKGKGYKFAEKFPEKFHSAAPFDIQTGKFVNEEQE 312
Query: 189 ----LFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F K L M GTGL F K P R FDVGIAEQHA TFAAG
Sbjct: 313 TYSDVFGKTLTEMALKDDEIVAITAAMPEGTGLTHFAKLIPERFFDVGIAEQHATTFAAG 372
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+A +G KP+ A+YS+FLQR +DQ+ HDV +QKLPV FAIDRAG+VG DG TH G FD ++
Sbjct: 373 MAVQGYKPYFAVYSTFLQRAYDQIIHDVCIQKLPVVFAIDRAGIVGEDGETHQGVFDLSY 432
Query: 292 MACLPNMVVM 301
+ +PN+ +M
Sbjct: 433 LRPIPNIAIM 442
>gi|333985124|ref|YP_004514334.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylomonas methanica
MC09]
gi|333809165|gb|AEG01835.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylomonas methanica
MC09]
Length = 620
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 195/368 (52%), Gaps = 79/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+TIR G+ E+ +DAFGVGHSSTSISA L GMA+ L G++
Sbjct: 94 MQTIRTLGGVSAFPSRDESEYDAFGVGHSSTSISAAL----------GMAIASQLRGEDK 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQF--------RQLCQEA 99
++++I +G+ M+YEA+N+AG +N L + +P + L +
Sbjct: 144 KMVAIIGDGSITGGMAYEAMNHAGDVNANLLVILNDNDMSISPPVGAMNNYLTKVLSSKL 203
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
+SS +++ +K M + +R+ E + FE+LG Y GP+DGH++ L
Sbjct: 204 YSSVREESKKALASMPSVWELARKTEEHVKGMIVPGTLFEELGFNYFGPIDGHDVAMLVS 263
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------------------- 186
L+++K I P V +HV+T+K K P +
Sbjct: 264 TLEKLKDISGP--VFLHVVTKKGKGYAPAEKDPLAYHGVPAFDPSKDSLPKSAPSPHPTY 321
Query: 187 TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F L D R+ G G+GL F + FP R FDV IAEQHAVT AAG A
Sbjct: 322 TEVFGNWLCDMAAQDERLLGITPAMREGSGLVKFSQQFPKRYFDVAIAEQHAVTLAAGQA 381
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
+G KP AIYS+FLQR +DQ+ HDV LQKL V FA+DRAGLVG DGPTH G++D ++M
Sbjct: 382 CQGAKPVVAIYSTFLQRAYDQLIHDVALQKLDVLFALDRAGLVGPDGPTHAGSYDFSYMR 441
Query: 294 CLPNMVVM 301
C+PNM+VM
Sbjct: 442 CIPNMLVM 449
>gi|300867681|ref|ZP_07112326.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria sp. PCC 6506]
gi|300334264|emb|CBN57498.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria sp. PCC 6506]
Length = 635
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 147/373 (39%), Positives = 193/373 (51%), Gaps = 86/373 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+ D FG GH+STSISAGL GMA+ RD+ G+N V
Sbjct: 89 TLRQKDGVAGYLKRCESKFDHFGAGHASTSISAGL----------GMALARDMKGENFKV 138
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKA--LKRLHSN-----------PQFR--------- 93
++VI +GA M+ EAIN+AG L K L L+ N P++
Sbjct: 139 VAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPNVGAIPRYLNKMRLSAPV 198
Query: 94 QLCQEAFSSKDKKQKFGGQ-----MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
Q ++ + K F G+ M + + + E+LG Y+GPVDGHNL
Sbjct: 199 QFLKDNLEEQFKHIPFVGETFTPEMERLKEGMKRLAVPKVGAVIEELGFTYMGPVDGHNL 258
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEK-------------AMLPLKLQQ--------- 186
E+L KQ I P VL+HV+T K K A P L
Sbjct: 259 EELIATFKQAHTIQGP--VLVHVVTVKGKGYAIAEKDQVGYHAQNPFNLATGKAIPSNRP 316
Query: 187 -----TRLFCKIL-----DN--------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
+++F L DN M GTGL+ FQ+ P + DVGIAEQHAVT
Sbjct: 317 KPPAYSKVFAHALIKLAEDNPKIVAITAAMATGTGLDKFQEKLPKQYIDVGIAEQHAVTC 376
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLA EG++P AIYS+FLQR +DQ+ HDV +QKLPV F +DRAG+VGADGPTH G +D
Sbjct: 377 AAGLACEGIRPVVAIYSTFLQRAYDQIVHDVCIQKLPVFFCLDRAGIVGADGPTHQGMYD 436
Query: 289 TTFMACLPNMVVM 301
+++ CLPNMV+M
Sbjct: 437 ISYLRCLPNMVLM 449
>gi|148264229|ref|YP_001230935.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter uraniireducens
Rf4]
gi|146397729|gb|ABQ26362.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter uraniireducens
Rf4]
Length = 620
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 148/370 (40%), Positives = 193/370 (52%), Gaps = 83/370 (22%)
Query: 1 MRTIRQTCGL----ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVI 56
+RT+ G E+ HDAF VGHSSTSISA L GMA+ RDL ++N V+
Sbjct: 88 LRTLGGISGFPKRAESPHDAFDVGHSSTSISAAL----------GMALARDLKQEHNKVL 137
Query: 57 SVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEAFSS 102
+VI +G+ ++YE +N+AG LNK L + ++ + R + E F
Sbjct: 138 AVIGDGSMTGGLAYEGLNHAGHLNKDLVVILNDNEMSISENVGALSSFLSRTITNE-FVH 196
Query: 103 KDKKQKFGGQMHEIDAFSREI-EAGSRA-----------CFFEDLGLYYIGPVDGHNLED 150
K KK G + +D R + + RA FE G Y+GP+DGHN+E
Sbjct: 197 KIKKD-VEGFLENLDGLGRGVLQVAKRAEESLKGLFTPGMLFEAFGFEYVGPIDGHNVEL 255
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L L+ VK D AVLIHV+T+K K P +
Sbjct: 256 LMETLENVKRFDD--AVLIHVLTKKGKGYAPAEANPSLFHGVGPFDVATGKVLKGKGGAA 313
Query: 187 --TRLFCKIL-----DN--------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + + DN M GTGL+ F +P R FDVGIAEQH VTFAAG
Sbjct: 314 SYTYIFGEAMKKIAEDNDKVVAITAAMPDGTGLSGFAAKYPERFFDVGIAEQHGVTFAAG 373
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA++G KP A+YSSFLQR +DQV HDV LQ LPV FAIDRAG+VG+DGPTH G FD ++
Sbjct: 374 LASQGFKPVFAVYSSFLQRAYDQVFHDVCLQNLPVVFAIDRAGVVGSDGPTHHGVFDLSY 433
Query: 292 MACLPNMVVM 301
+ LP M +M
Sbjct: 434 LRHLPAMTLM 443
>gi|253995977|ref|YP_003048041.1| deoxyxylulose-5-phosphate synthase [Methylotenera mobilis JLW8]
gi|253982656|gb|ACT47514.1| deoxyxylulose-5-phosphate synthase [Methylotenera mobilis JLW8]
Length = 617
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 189/366 (51%), Gaps = 77/366 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+ +R+ G+ E+ +D FG GHSSTSISA L GMAV G
Sbjct: 89 MQNLRKPQGIAGFPRRNESGYDTFGTGHSSTSISAAL----------GMAVAAQKAGSER 138
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF 100
+++I +GA A M++EA+NNAG VLN + +N +L F
Sbjct: 139 RSVAIIGDGAMTAGMAFEALNNAGNMDANLLVVLNDNDMSISNNVGALNNYLAKLLSSRF 198
Query: 101 SSKDKK--QKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
+K +K + + F++ E + FE+ G YIGP+DGH+L+ L
Sbjct: 199 YGTVRKSGKKVLSALPPMMEFAKRAEEHVKGMVTPGTLFEEFGFNYIGPIDGHDLDALID 258
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------TR 188
L +K + P +H++T+K K P + T
Sbjct: 259 TLHNIKQLNGP--QFLHIVTQKGKGFEPAEANPNKFHGVGKFDPFNGNAISAKAAKSYTE 316
Query: 189 LFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAE 235
+F L D+R+ G G+GLN F FP R +DVGIAEQHA+TFAAG+A +
Sbjct: 317 VFGDWLVDMAAADHRLIGVTPAMCDGSGLNAFASQFPERYYDVGIAEQHALTFAAGMACD 376
Query: 236 GLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACL 295
GLKP AIYS+FLQR +DQ+ HD+ LQ LPV AIDRAGLVGADGPTH G+FD TFM C+
Sbjct: 377 GLKPVVAIYSTFLQRAYDQLIHDIALQNLPVLLAIDRAGLVGADGPTHAGSFDLTFMRCI 436
Query: 296 PNMVVM 301
PN+V+M
Sbjct: 437 PNIVIM 442
>gi|254372830|ref|ZP_04988319.1| 1-deoxyxylulose-5-phosphate synthase [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570557|gb|EDN36211.1| 1-deoxyxylulose-5-phosphate synthase [Francisella novicida
GA99-3549]
Length = 615
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 196/364 (53%), Gaps = 77/364 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ G+ E+ +D FGVGHSSTSISA L GMA+ L GK+++
Sbjct: 93 TIKKDGGISGFPKRSESEYDTFGVGHSSTSISAAL----------GMAIADRLQGKSSNT 142
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF-- 100
++VI +GA M++EA+N+AG +LN + N F ++ F
Sbjct: 143 VAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSAHFSKIISGGFYN 202
Query: 101 SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVL 155
S ++K ++ + I F +++E ++ A FFEDLG YY+GP+DGH++ +L L
Sbjct: 203 SIREKGKEVLKNIPPIFEFVKKVETQTKGMFVPANFFEDLGFYYVGPIDGHDVTELVKTL 262
Query: 156 KQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ--------------------TRLF 190
+ +K G L+HVIT+K K P+K + +F
Sbjct: 263 RILK--DHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENVITKASKPTYSNIF 320
Query: 191 CKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGL 237
+ D R+ G G+ L F + +P R FDV IAEQHAVTFA GLA +GL
Sbjct: 321 GNWICQKAAKDKRLVGITPAMKEGSDLISFSQLYPHRYFDVAIAEQHAVTFAGGLACQGL 380
Query: 238 KPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPN 297
KP AIYS+FLQR +DQV HD+ LQ L V +A+DRAGLVGADG TH G+FD FM C+PN
Sbjct: 381 KPVVAIYSTFLQRAYDQVVHDIALQNLDVLYAVDRAGLVGADGATHDGSFDLAFMRCIPN 440
Query: 298 MVVM 301
V+M
Sbjct: 441 HVIM 444
>gi|357038610|ref|ZP_09100407.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum gibsoniae
DSM 7213]
gi|355359402|gb|EHG07164.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum gibsoniae
DSM 7213]
Length = 639
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 137/356 (38%), Positives = 186/356 (52%), Gaps = 80/356 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ HDAF GHSSTSISA L GMA+ RDL G V++VI +G+ M+Y
Sbjct: 106 ESEHDAFATGHSSTSISAAL----------GMALARDLKGDRYAVVAVIGDGSMTGGMAY 155
Query: 71 EAINNAGVLNK----------------------ALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+N+AG L K L R+ ++P++ + E +
Sbjct: 156 EALNHAGHLKKDLIVVLNDNKMSISANVGAMSGYLNRMRTDPKYSRGKDEIEQILRRIPS 215
Query: 109 FGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
G + ++ D+F + G FE++G Y+GP+DGHN+ + +Q K++
Sbjct: 216 IGSTVVKVAERLKDSFKYLVVPG---MIFEEMGFTYLGPIDGHNMLSMLNTFEQAKSLGG 272
Query: 164 PGAVLIHVITEK--------EKA-----MLPLKLQQ------------TRLFCKIL---- 194
P VL+HV+TEK EKA + P + T +F + L
Sbjct: 273 P--VLVHVVTEKGCGYAPAVEKADKFHGIGPFDISSGNCLKKSDISTYTEIFGRTLVKLA 330
Query: 195 ---------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS 245
M GTGLN F K FP R FDVGIAEQHAVT AAGLA +G KP A+YS
Sbjct: 331 EQDPAVVGITAAMCSGTGLNEFAKKFPSRFFDVGIAEQHAVTMAAGLATQGYKPVVAVYS 390
Query: 246 SFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
+FLQR +DQ+ HDV LQKLPV FA+DR+G+VG DGPTH G FD +++ P+M +M
Sbjct: 391 TFLQRAYDQIIHDVCLQKLPVVFAVDRSGIVGDDGPTHHGLFDISYLRSAPHMTIM 446
>gi|241663624|ref|YP_002981984.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia pickettii 12D]
gi|240865651|gb|ACS63312.1| deoxyxylulose-5-phosphate synthase [Ralstonia pickettii 12D]
Length = 636
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 197/377 (52%), Gaps = 93/377 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G G++
Sbjct: 90 MGSLRQLDGISGFPRRSESPYDTFGTAHSSTSISAAL----------GMALGAKTNGEDR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 140 VAIAVIGDGAMSAGMAFEAMNNAGVYKDLPLVVVLNDNDMSISPPVGALNRYLARLMSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDG 145
QF ++K +K + F++ E ++ F FE+ G YIGP+DG
Sbjct: 199 QFYA------ATKKGVEKLLSVAPPVLEFAKRFEEHTKGMFVPATMFEEFGFNYIGPIDG 252
Query: 146 HNLEDLAYVLKQVK--AIPDPGAVLIHVITEK--------------------------EK 177
H+LE L L+ ++ A G +HV+T+K +
Sbjct: 253 HDLESLVPTLQNIRQRAREGGGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPQEGIKP 312
Query: 178 AMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQH 224
+ P K+ T++F + L D R+ G G+G+ F++ FP R +DVGIAEQH
Sbjct: 313 SGRPAKVTYTQVFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQH 372
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFA GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 373 AVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHA 432
Query: 285 GAFDTTFMACLPNMVVM 301
GA+D ++ C+PNM+VM
Sbjct: 433 GAYDIAYLRCIPNMMVM 449
>gi|255524167|ref|ZP_05391127.1| deoxyxylulose-5-phosphate synthase [Clostridium carboxidivorans P7]
gi|296186625|ref|ZP_06855027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium
carboxidivorans P7]
gi|255512152|gb|EET88432.1| deoxyxylulose-5-phosphate synthase [Clostridium carboxidivorans P7]
gi|296048662|gb|EFG88094.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium
carboxidivorans P7]
Length = 620
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 195/370 (52%), Gaps = 86/370 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+++D F GHSSTSISA L GMA RDL + + V
Sbjct: 91 TLRQFGGMSGFPKSSESIYDFFETGHSSTSISAAL----------GMARARDLKRETHEV 140
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLN--------------KALKRLHSNPQFR 93
++VI +GA M+ EA+N+AG +LN K L ++ +P++
Sbjct: 141 VAVIGDGALTGGMALEALNDAGYRKTKLIIILNDNQMSIGKNVGGVSKYLNKIRIDPKYN 200
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNL 148
+ E ++ K G M + + I+ G + FFED+G+ Y+GPVDGHNL
Sbjct: 201 KFKLEVENTLKKIPNIGRGMAK---YLERIKNGIKQMIVPGMFFEDMGIKYLGPVDGHNL 257
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEK-------------AMLPLKL----------- 184
++L VL + K I +P V+IHVIT+K K ++ P
Sbjct: 258 KELTEVLSKAKNIKEP--VIIHVITKKGKGYEFAEKNSGKFHSIGPFHCDSGEVCADSCV 315
Query: 185 -------QQTRLFCKILDN------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
++ K +N M GTGL F K FP R FDVGIAEQHAVT AAG
Sbjct: 316 TYSKAFGEEMVWLGKHYNNVVAITAAMRDGTGLGEFSKVFPSRFFDVGIAEQHAVTMAAG 375
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+A GLKP A+YS+FLQR +DQ+ HDV +QKLPV FAIDRAG+VG DG TH G FD +F
Sbjct: 376 MAKTGLKPVFAVYSTFLQRAYDQILHDVCIQKLPVIFAIDRAGIVGQDGETHQGVFDLSF 435
Query: 292 MACLPNMVVM 301
+ +PN+ VM
Sbjct: 436 LTHIPNITVM 445
>gi|323693773|ref|ZP_08107968.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium symbiosum
WAL-14673]
gi|323502159|gb|EGB18026.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium symbiosum
WAL-14673]
Length = 629
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 190/369 (51%), Gaps = 85/369 (23%)
Query: 4 IRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVI 56
+RQ GL E+ DAF GHSSTSISAGL GMA GRD+LG+ ++
Sbjct: 90 LRQYGGLSGFPKRKESPFDAFDTGHSSTSISAGL----------GMAQGRDVLGEEYSIV 139
Query: 57 SVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQFRQ 94
SVI +GA M+YEA+NNA G +++ L L ++ +
Sbjct: 140 SVIGDGALTGGMAYEALNNAARLKKNFIIVLNDNKMSISENVGGISRYLSNLRADEGYNL 199
Query: 95 LCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR----ACFFEDLGLYYIGPVDGHNLED 150
L + + K G + +D R + + +FE++G+ Y+GPVDGH+++
Sbjct: 200 LKKNVAGTLAKVPMIGNDL--VDTLLRTKNSIKQFLIPGMWFENMGITYLGPVDGHDVKG 257
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQT----------------------- 187
LA + + K I AVLIHV+T+K K P + +
Sbjct: 258 LAKIFSEAKKINH--AVLIHVMTKKGKGYRPAERNPSSFHGVEPFDIETGKPLGQKLYPS 315
Query: 188 ------RLFCKILDNR---------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
R CKI + M GTGL F + +P R FDVGIAE+HAVT AAG+
Sbjct: 316 YTDVFSREICKIAETNEKLVAVTAAMPDGTGLKRFSRLYPQRFFDVGIAEEHAVTSAAGM 375
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
AA GLKP +YSSFLQR +DQ+ HDV +Q LPV F +DRAGLVG+DG TH G FD T++
Sbjct: 376 AAAGLKPVVVVYSSFLQRAYDQIVHDVCIQNLPVLFCVDRAGLVGSDGETHQGIFDLTYL 435
Query: 293 ACLPNMVVM 301
+ +PNM V+
Sbjct: 436 SSIPNMSVI 444
>gi|374367606|ref|ZP_09625667.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus basilensis
OR16]
gi|373100909|gb|EHP41969.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus basilensis
OR16]
Length = 636
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 142/370 (38%), Positives = 191/370 (51%), Gaps = 79/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+G LG+
Sbjct: 90 MHSLRQWGGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMALGARTLGEKR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV---------LNKALKRLHS-----NPQFRQLCQEA 99
I+VI +GA A M++EA+NNAGV LN + N +L
Sbjct: 140 VSIAVIGDGAMTAGMAFEAMNNAGVYKDLPLLVVLNDNDMSISPPVGALNSHLARLMSGK 199
Query: 100 FSSKDKK--QKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLA 152
F + KK ++ + F++ E ++ A FE+ G YIGP+DGH+LE L
Sbjct: 200 FYAATKKGIERVLSVAPPVLEFAKRFEEHAKGMMVPATLFEEFGFNYIGPIDGHDLESLV 259
Query: 153 YVLKQVK--AIPDPGAVLIHVITEK--------------------------EKAMLPLKL 184
L+ ++ A+ G +HV+T+K + P +
Sbjct: 260 PTLQNIRQRALEGGGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPAEGIRPSTKPARK 319
Query: 185 QQTRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T++F + L M G+G+ F+K FP R +DVGIAEQHAVTFA G
Sbjct: 320 TYTQVFGEWLCDMAAADPKLVAVTPAMREGSGMVEFEKRFPNRYYDVGIAEQHAVTFAGG 379
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+D F
Sbjct: 380 LACEGLKPVLAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAF 439
Query: 292 MACLPNMVVM 301
+ C+PNM+VM
Sbjct: 440 LRCIPNMMVM 449
>gi|411117534|ref|ZP_11390021.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoriales
cyanobacterium JSC-12]
gi|410713637|gb|EKQ71138.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoriales
cyanobacterium JSC-12]
Length = 636
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 188/375 (50%), Gaps = 90/375 (24%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+ D FG GH+STSISA L GMA+ RDL G+ V
Sbjct: 89 TLRQKDGIAGYLKRSESKFDHFGAGHASTSISAAL----------GMALARDLKGEKFKV 138
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKA-----------------------LKRLHSNPQF 92
++VI +GA M+ EAIN+AG L K L +L +P
Sbjct: 139 VAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPNVGAIPRYLNKLRLSPPV 198
Query: 93 RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR------ACFFEDLGLYYIGPVDGH 146
Q + + K F G+ D +R E R FE+LG Y+GP+DGH
Sbjct: 199 -QFLSDNLEEQLKHLPFVGESLSPD-LNRLKEGMKRLAVPKVGAVFEELGFTYMGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEK---------------------------AM 179
NLE+L +Q P P VL+HV T K K +
Sbjct: 257 NLEELIATFQQAHKTPGP--VLVHVATVKGKGYEVAEQDQVGYHAQNPFNIATGKAIPST 314
Query: 180 LPLKLQQTRLF----CKILDNR---------MGGGTGLNLFQKHFPIRCFDVGIAEQHAV 226
P +++F KI +N M GTGL++ QK P + DVGIAEQHAV
Sbjct: 315 KPKPPGYSKVFGETLTKIAENNPKVIGITAAMATGTGLDILQKRLPDQYIDVGIAEQHAV 374
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
T AAGLA EG++P AIYS+FLQR FDQ+ HDV +QKLPV F +DRAG+VGADGPTH G
Sbjct: 375 TLAAGLACEGMRPVAAIYSTFLQRAFDQIVHDVCIQKLPVFFCLDRAGIVGADGPTHQGM 434
Query: 287 FDTTFMACLPNMVVM 301
+D ++ C+PNMV+M
Sbjct: 435 YDIAYLRCIPNMVLM 449
>gi|363898651|ref|ZP_09325173.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oribacterium sp. ACB1]
gi|361960556|gb|EHL13792.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oribacterium sp. ACB1]
Length = 656
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 187/356 (52%), Gaps = 80/356 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D F GHSSTSISA L G+A GRD+LG++ V++VI +GA M+Y
Sbjct: 104 ESPYDCFNTGHSSTSISAAL----------GIAEGRDILGEDYTVLAVIGDGALTGGMAY 153
Query: 71 EAINNAGVLNKA----------------------LKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNA + K L + SN + + + S K
Sbjct: 154 EALNNASKMKKNFIIILNDNEMSIAKNVGGMSTYLNGIRSNKGYTRFKENLASGLGKIPV 213
Query: 109 FGGQMHE-----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
G + E ++ + + G FE++GL Y+GPVDGHNL L V+ + K I
Sbjct: 214 VGNHLVERLKNTKNSIKQLLVPG---MLFENMGLTYLGPVDGHNLHALEQVIHEAKRIDH 270
Query: 164 PGAVLIHVITEKEKAMLPLK-------------------------LQQTRLFCKIL---- 194
AVL+HV+T+K K P + T +F + L
Sbjct: 271 --AVLVHVVTKKGKGYAPAEKNPSAFHGVGPFHIATGKSKKESSEKSYTDIFSESLIKEG 328
Query: 195 -DNR--------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS 245
+N+ M GTGL+ F+K FP R FDVGIAE HAVT AAGLA+ GLKP A+YS
Sbjct: 329 KENKKIVAITAAMPDGTGLDKFEKLFPKRFFDVGIAEAHAVTSAAGLASAGLKPVFAVYS 388
Query: 246 SFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
SFLQR +DQ+ HDV LQKLPV FAIDRAGLVGADG TH G FD +++ +PNM VM
Sbjct: 389 SFLQRAYDQLVHDVCLQKLPVVFAIDRAGLVGADGETHQGIFDISYLRSIPNMTVM 444
>gi|296313441|ref|ZP_06863382.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria polysaccharea
ATCC 43768]
gi|296840031|gb|EFH23969.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria polysaccharea
ATCC 43768]
Length = 634
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 149/381 (39%), Positives = 194/381 (50%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKQLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMELAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VLK ++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLKDLRGRKGP--QLLHVITKKGNGYKLAENDPVKYHAVAKLPKEGAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCVPNMIV 459
>gi|319639352|ref|ZP_07994103.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria mucosa C102]
gi|317399536|gb|EFV80206.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria mucosa C102]
Length = 629
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 192/377 (50%), Gaps = 89/377 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMAV LG N
Sbjct: 91 MHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAVADKQLGNNR 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN----PQFRQ------- 94
+++I +GA A ++EA+N AG +LN + N P++
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVILNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 95 ---LCQEAFSSKDKKQKFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
L S K G M ++I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTIKAQSSKVLDKLPGAMELAQKVENKIKTLAGEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEK---------------AMLP------- 181
DGHN+E+L VLK ++ P L+HVIT+K A LP
Sbjct: 261 DGHNVENLVDVLKDLRGRKGPQ--LLHVITKKGNGYKFAENDPVKYHAVAKLPSEVPAPE 318
Query: 182 -----LKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQ 223
K T++F + L D R M G+GL F+ FP R FDVGIAEQ
Sbjct: 319 VKPAAAKPTYTQVFGQWLCDQATADERLVAITPAMREGSGLVEFEHQFPDRYFDVGIAEQ 378
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
HAVTFA GLA EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAG+VGADGPTH
Sbjct: 379 HAVTFAGGLACEGIKPVVAIYSTFLQRAYDQLVHDVALQNLPVLFAIDRAGIVGADGPTH 438
Query: 284 CGAFDTTFMACLPNMVV 300
G +D +F+ C+PNM++
Sbjct: 439 AGLYDLSFLRCVPNMII 455
>gi|387824464|ref|YP_005823935.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella cf. novicida
3523]
gi|328676063|gb|AEB28738.1| 1-deoxy-D-xylulose 5-phosphate synthase [Francisella cf. novicida
3523]
Length = 617
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 196/364 (53%), Gaps = 77/364 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ G+ E+ +D FGVGHSSTSISA L GMA+ L GK+++
Sbjct: 93 TIKKDGGISGFPKRSESEYDTFGVGHSSTSISAAL----------GMAIADRLQGKSSNT 142
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF-- 100
++VI +GA M++EA+N+AG +LN + N F ++ F
Sbjct: 143 VAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSAHFSKIISGGFYN 202
Query: 101 SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVL 155
S ++K ++ + I F ++IE ++ A FFEDLG YY+GP+DGH++ +L L
Sbjct: 203 SIREKGKEVLKNIPPIFEFVKKIETQTKGMFVPANFFEDLGFYYVGPIDGHDVTELVKTL 262
Query: 156 KQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ--------------------TRLF 190
+ +K G L+HVIT+K K P+K + +F
Sbjct: 263 RILK--DHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENITTKISKPTYSNIF 320
Query: 191 CKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGL 237
+ D R+ G G+ L F + +P R FDV IAEQHAVTFA GLA +GL
Sbjct: 321 GDWICQKAAKDKRLVGITPAMKEGSDLIRFSQLYPHRYFDVAIAEQHAVTFAGGLACQGL 380
Query: 238 KPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPN 297
KP AIYS+FLQR +DQV HD+ LQ L V +A+DRAGLVGADG TH G+FD FM C+PN
Sbjct: 381 KPVVAIYSTFLQRAYDQVIHDIALQNLDVLYAVDRAGLVGADGATHDGSFDLAFMRCIPN 440
Query: 298 MVVM 301
V+M
Sbjct: 441 HVIM 444
>gi|110677515|ref|YP_680522.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter denitrificans
OCh 114]
gi|118595484|sp|Q16DV7.1|DXS1_ROSDO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
synthase 1; Short=DXPS 1
gi|109453631|gb|ABG29836.1| 1-deoxy-D-xylulose-5-phosphate synthase, putative [Roseobacter
denitrificans OCh 114]
Length = 645
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 182/371 (49%), Gaps = 81/371 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L G + RD+
Sbjct: 93 MPTLRQGGGISGFTKRSESEYDPFGAAHSSTSISAAL----------GFTISRDMGQPTG 142
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSNPQFRQLCQEAFSSKDK 105
++VI +G+ A M+YEA+NNAG +LN + + S +
Sbjct: 143 DAVAVIGDGSISAGMAYEAMNNAGHEGRRMFVILNDNEMSIAPPVGAMSSYLSSLSELSR 202
Query: 106 KQKFGGQMHEIDAF--------------SREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
FGG + + +RE+ G +R FFE+LG YIGP+DGH++
Sbjct: 203 AGPFGGLVAIAEGMEQLAPKPVRDGARRARELVTGLENRGTFFEELGFDYIGPIDGHDMA 262
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VL+ KA G VLIH T K K P +
Sbjct: 263 QLLSVLRGAKARAT-GPVLIHCCTVKGKGYAPAEGSADKYHGVSKFDVGTGVQAKAKANA 321
Query: 184 LQQTRLFCKILDN-------------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T +F L M GTG++ K FP R FDVGIAEQH VTFAA
Sbjct: 322 PSYTAVFGDALTTLAEEDPSVVAVTAAMPSGTGVDRMAKRFPNRVFDVGIAEQHGVTFAA 381
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
+AA GLKPFCAIYS+FLQR +DQ+ HDV LQ LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 382 AMAATGLKPFCAIYSTFLQRGYDQIVHDVALQGLPVRFAIDRAGLVGADGATHAGSFDIG 441
Query: 291 FMACLPNMVVM 301
++ LP MVVM
Sbjct: 442 YLGALPGMVVM 452
>gi|89256407|ref|YP_513769.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. holarctica LVS]
gi|115314849|ref|YP_763572.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. holarctica OSU18]
gi|156502498|ref|YP_001428563.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. holarctica FTNF002-00]
gi|254367743|ref|ZP_04983764.1| 1-deoxy-D-xylulose 5-phosphate synthase [Francisella tularensis
subsp. holarctica 257]
gi|290953830|ref|ZP_06558451.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. holarctica URFT1]
gi|422938794|ref|YP_007011941.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. holarctica FSC200]
gi|118595582|sp|Q2A3D3.1|DXS_FRATH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|122325136|sp|Q0BLU9.1|DXS_FRATO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|166198616|sp|A7NCA4.1|DXS_FRATF RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|89144238|emb|CAJ79511.1| 1-deoxy-D-xylulose 5-phosphate synthase [Francisella tularensis
subsp. holarctica LVS]
gi|115129748|gb|ABI82935.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. holarctica OSU18]
gi|134253554|gb|EBA52648.1| 1-deoxy-D-xylulose 5-phosphate synthase [Francisella tularensis
subsp. holarctica 257]
gi|156253101|gb|ABU61607.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. holarctica FTNF002-00]
gi|407293945|gb|AFT92851.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. holarctica FSC200]
Length = 615
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 196/364 (53%), Gaps = 77/364 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ G+ E+ +D FGVGHSSTSISA L GMA+ L GK+++
Sbjct: 93 TIKKDGGISGFPKRSESEYDTFGVGHSSTSISAAL----------GMAIADRLQGKSSNT 142
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF-- 100
++VI +GA M++EA+N+AG +LN + N F ++ F
Sbjct: 143 VAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSAHFSKIISGGFYN 202
Query: 101 SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVL 155
S ++K ++ + I F ++IE ++ A FFEDLG YY+GP+DGH++ +L L
Sbjct: 203 SIREKGKEVLKNIPPIFEFVKKIETQTKGMFVPANFFEDLGFYYVGPIDGHDVTELVKTL 262
Query: 156 KQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ--------------------TRLF 190
+ +K G L+HVIT+K K P+K + +F
Sbjct: 263 RILK--DHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENITTKISKPTYSNIF 320
Query: 191 CKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGL 237
+ D R+ G G+ L F + +P R FDV IAEQHAVTFA GLA +GL
Sbjct: 321 GDWICQKAAKDKRLVGITPAMKEGSDLIRFSQLYPHRYFDVAIAEQHAVTFAGGLACQGL 380
Query: 238 KPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPN 297
KP AIYS+FLQR +DQV HD+ LQ L V +A+DRAGLVGADG TH G+FD FM C+PN
Sbjct: 381 KPVVAIYSTFLQRAYDQVIHDIALQNLDVLYAVDRAGLVGADGATHDGSFDLAFMRCIPN 440
Query: 298 MVVM 301
V+M
Sbjct: 441 HVIM 444
>gi|15895347|ref|NP_348696.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium acetobutylicum
ATCC 824]
gi|337737295|ref|YP_004636742.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium acetobutylicum
DSM 1731]
gi|384458803|ref|YP_005671223.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium acetobutylicum
EA 2018]
gi|21263536|sp|Q97HD5.1|DXS_CLOAB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|15025065|gb|AAK80036.1|AE007710_6 Deoxyxylulose-5-phosphate synthase [Clostridium acetobutylicum ATCC
824]
gi|325509492|gb|ADZ21128.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium acetobutylicum
EA 2018]
gi|336292459|gb|AEI33593.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium acetobutylicum
DSM 1731]
Length = 619
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 137/355 (38%), Positives = 189/355 (53%), Gaps = 80/355 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+++DAF GHSSTSISA G+A RDL N VI+VI +GA M+
Sbjct: 106 ESIYDAFETGHSSTSISAA----------SGIARARDLSKDNYDVIAVIGDGALTGGMAL 155
Query: 71 EAIN----------------------NAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+N N G ++K L ++ +P++ +L ++ +K ++
Sbjct: 156 EALNDIGYKKTNVIIILNDNQMSIAKNVGSISKYLNKIRLDPKYNKLKKDV-KTKLQRTN 214
Query: 109 FGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
G E+ I+ G + FFED+G+ Y+GP+DGHN+E+L V+ + K I
Sbjct: 215 IGS---EVANSIERIKGGIKQMVVSGMFFEDIGIKYLGPIDGHNIEELTSVISKAKEIKG 271
Query: 164 PGAVLIHVITEKEK------------------------AMLPLKLQQTRLFCKIL----D 195
P V++HV T+K K A+ K ++ F K + +
Sbjct: 272 P--VILHVKTQKGKGYSYAEENPNKFHSIGKFNSKTGEALSKPKDTYSKAFGKAMVQMAE 329
Query: 196 NR---------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSS 246
N M GTGL F K FP R FDVGI+EQHAVT AAGLAA G KP A+YS+
Sbjct: 330 NNDKIVAITAAMTDGTGLCEFSKKFPQRFFDVGISEQHAVTMAAGLAATGYKPVFAVYST 389
Query: 247 FLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
FLQR +DQV HDV +QKLPV FAIDRAG+VG DG TH G FD ++++ +PNM +M
Sbjct: 390 FLQRAYDQVLHDVCIQKLPVVFAIDRAGIVGEDGETHQGVFDISYLSSIPNMTIM 444
>gi|323484857|ref|ZP_08090213.1| hypothetical protein HMPREF9474_01964 [Clostridium symbiosum
WAL-14163]
gi|323401853|gb|EGA94195.1| hypothetical protein HMPREF9474_01964 [Clostridium symbiosum
WAL-14163]
Length = 629
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 190/369 (51%), Gaps = 85/369 (23%)
Query: 4 IRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVI 56
+RQ GL E+ DAF GHSSTSISAGL GMA GRD+LG+ ++
Sbjct: 90 LRQYGGLSGFPKRKESPFDAFDTGHSSTSISAGL----------GMAQGRDVLGEEYSIV 139
Query: 57 SVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQFRQ 94
SVI +GA M+YEA+NNA G +++ L L ++ +
Sbjct: 140 SVIGDGALTGGMAYEALNNAARLKKNFIIVLNDNKMSISENVGGISRYLSNLRADEGYNL 199
Query: 95 LCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR----ACFFEDLGLYYIGPVDGHNLED 150
L + + K G + +D R + + +FE++G+ Y+GPVDGH+++
Sbjct: 200 LKKNVAGTLAKVPMIGNDL--VDTLLRTKNSIKQFLIPGMWFENMGITYLGPVDGHDVKG 257
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQT----------------------- 187
LA + + K I AVLIHV+T+K K P + +
Sbjct: 258 LAKIFSEAKKINH--AVLIHVMTKKGKGYRPAERNPSSFHGVEPFDIETGKPLGQKLYPS 315
Query: 188 ------RLFCKILDNR---------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
R CKI + M GTGL F + +P R FDVGIAE+HAVT AAG+
Sbjct: 316 YTDVFSREICKIAETNEKLVAVTAAMPDGTGLKRFSRLYPQRFFDVGIAEEHAVTSAAGM 375
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
AA GLKP +YSSFLQR +DQ+ HDV +Q LPV F +DRAGLVG+DG TH G FD T++
Sbjct: 376 AAAGLKPVVVVYSSFLQRAYDQIVHDVCIQNLPVLFCVDRAGLVGSDGETHQGIFDLTYL 435
Query: 293 ACLPNMVVM 301
+ +PNM V+
Sbjct: 436 SSIPNMSVI 444
>gi|359061968|ref|XP_002683931.2| PREDICTED: 1-deoxy-D-xylulose-5-phosphate synthase, partial [Bos
taurus]
Length = 411
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 194/371 (52%), Gaps = 92/371 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+V+D FG HSSTSISA L GMA+ G N
Sbjct: 10 MHTLRQLGGISGFPQRAESVYDTFGTAHSSTSISAAL----------GMALAAKRKGDNR 59
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
H +++I +GA A M++EA+NNAGV LN+ L +L S Q
Sbjct: 60 HAVAIIGDGAMSAGMAFEALNNAGVADCNLLVVLNDNDMSISPPVGALNRYLAQLMSG-Q 118
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGH 146
F ++K+ + + + F++ E ++ A FE G YIGP+DGH
Sbjct: 119 FYA------AAKNVGKTVLRPVPPLLEFAKRFEQQAKGMVVPATLFEKFGFNYIGPIDGH 172
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAML 180
+L+ L L+ +K++ P +HV+T+K K
Sbjct: 173 DLDSLIPTLENIKSLKGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPSVGLTKPAT 230
Query: 181 PLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVT 227
P K T++F + L D R+ G G+G+ F+K FP R +DVGIAEQHAVT
Sbjct: 231 PPKQTFTQVFGQWLCDMAAQDPRLVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVT 290
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAG+A EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+
Sbjct: 291 FAAGMACEGVKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 350
Query: 288 DTTFMACLPNM 298
D F+ C+PNM
Sbjct: 351 DIPFVRCIPNM 361
>gi|385792857|ref|YP_005825833.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|332678182|gb|AEE87311.1| 1-deoxy-D-xylulose 5-phosphate synthase [Francisella cf. novicida
Fx1]
Length = 615
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 196/364 (53%), Gaps = 77/364 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ G+ E+ +D FGVGHSSTSISA L GMA+ L GK+++
Sbjct: 93 TIKKDGGISGFPKRSESEYDTFGVGHSSTSISAAL----------GMAIADRLQGKSSNT 142
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF-- 100
++VI +GA M++EA+N+AG +LN + N F ++ F
Sbjct: 143 VAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSAHFSKIISGGFYN 202
Query: 101 SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVL 155
S ++K ++ + I F +++E ++ A FFEDLG YY+GP+DGH++ +L L
Sbjct: 203 SIREKGKEVLKNIPPIFEFVKKVETQTKGMFVPANFFEDLGFYYVGPIDGHDVTELVKTL 262
Query: 156 KQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ--------------------TRLF 190
+ +K G L+HVIT+K K P+K + +F
Sbjct: 263 RILK--DHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENVITKASKPTYSNIF 320
Query: 191 CKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGL 237
+ D R+ G G+ L F + +P R FDV IAEQHAVTFA GLA +GL
Sbjct: 321 GNWICQKAAKDKRLVGITPAMKEGSDLISFSQLYPHRYFDVAIAEQHAVTFAGGLACQGL 380
Query: 238 KPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPN 297
KP AIYS+FLQR +DQV HD+ LQ L V +A+DRAGLVGADG TH G+FD FM C+PN
Sbjct: 381 KPVVAIYSTFLQRAYDQVIHDIALQNLDVLYAVDRAGLVGADGATHDGSFDLAFMRCIPN 440
Query: 298 MVVM 301
V+M
Sbjct: 441 HVIM 444
>gi|317128431|ref|YP_004094713.1| deoxyxylulose-5-phosphate synthase [Bacillus cellulosilyticus DSM
2522]
gi|315473379|gb|ADU29982.1| deoxyxylulose-5-phosphate synthase [Bacillus cellulosilyticus DSM
2522]
Length = 629
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 194/371 (52%), Gaps = 85/371 (22%)
Query: 1 MRTIRQTCGL----ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVI 56
+R + CG E+ HD + GHSSTS+SA + GMA RDL G +++V+
Sbjct: 90 LRQYKGLCGFPKRSESEHDVWETGHSSTSLSAAM----------GMATARDLKGTDDNVV 139
Query: 57 SVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFRQ 94
++I +GA M+ EA+N N G L+ L R+ + ++++
Sbjct: 140 AIIGDGALTGGMALEALNHIGHEQKDLIVVLNDNEMSIAPNVGALHNVLGRMRTAGRYQK 199
Query: 95 LCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
++ K FGG++ D+ + +G FFE+LG Y+GPVDGH+L+
Sbjct: 200 AKEDLEMLIKKIPAFGGRLAATAERVKDSLKYLLVSG---MFFEELGFTYLGPVDGHDLD 256
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKA--------------MLPLKLQQ--------- 186
DL +K K P VL+HVIT+K K + P K++
Sbjct: 257 DLTTNMKYAKKTKGP--VLVHVITKKGKGYAPAENDAKGTWHGLGPYKMESGEVVKKPGP 314
Query: 187 ---TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+ +F + L DNR M GGT L++F K FP R FDVGIAEQHA T AA
Sbjct: 315 PSYSGVFAETLKKVAHEDNRVVALTAAMPGGTKLDVFGKEFPDRMFDVGIAEQHATTMAA 374
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA +G+KP A+YS+FLQR +DQV HDV Q L V FAIDRAGLVGADG TH G FD +
Sbjct: 375 GLATQGMKPVFAVYSTFLQRGYDQVVHDVCRQNLNVVFAIDRAGLVGADGETHQGVFDIS 434
Query: 291 FMACLPNMVVM 301
++ LPNM ++
Sbjct: 435 YLRHLPNMTIL 445
>gi|347819270|ref|ZP_08872704.1| 1-deoxy-D-xylulose-5-phosphate synthase [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 631
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 195/371 (52%), Gaps = 92/371 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +DAFG HSSTSISA L GMA+ G+
Sbjct: 93 MHTLRQLDGISGFPQRTESAYDAFGTAHSSTSISAAL----------GMAMVAKRQGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
H ++VI +GA A M++EA+NNAGV LN+ L +L S Q
Sbjct: 143 HAVAVIGDGAMSAGMAFEALNNAGVADCNLLVILNDNDMSISPPVGALNRYLAQLMSG-Q 201
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGH 146
F ++K+ + G M + F++ +E ++ A FE G YIGP+DGH
Sbjct: 202 FYA------AAKNVGKTVLGPMPPLLEFAKRLEQQAKGMVVPATLFEKFGFNYIGPIDGH 255
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKE--------------------------KAML 180
+L+ L L+ +K++ P +HV+T+K K
Sbjct: 256 DLDSLIPTLENIKSLTGP--QFLHVVTKKGQGYKLAETDPVAYHGPGQFDPAVGLVKGSA 313
Query: 181 PLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVT 227
+L T++F + L D R+ G G+G+ F+K FP R +DVGIAEQHAVT
Sbjct: 314 APRLSFTQVFGQWLCDMAAQDARLVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAVT 373
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAG+A EG KP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+
Sbjct: 374 FAAGMACEGAKPVLAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 433
Query: 288 DTTFMACLPNM 298
D F+ C+PNM
Sbjct: 434 DIAFLRCIPNM 444
>gi|197117646|ref|YP_002138073.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter bemidjiensis
Bem]
gi|197087006|gb|ACH38277.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter bemidjiensis
Bem]
Length = 646
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 152/371 (40%), Positives = 191/371 (51%), Gaps = 85/371 (22%)
Query: 1 MRTIRQTCGL----ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVI 56
+RT+ G E+ HD F VGHSSTSISAG VG AV RDL G+ N V+
Sbjct: 92 LRTLGGISGFPKRAESPHDCFDVGHSSTSISAG----------VGFAVARDLKGERNKVL 141
Query: 57 SVIVEGATIARMSYEAINNAGVLNKALKRLH--------------SNPQFRQLCQEAFSS 102
+VI +G+ ++ E +N+AG LNK L + SN R + E
Sbjct: 142 TVIGDGSMTGGLALEGLNHAGELNKDLVVILNDNEMSISENVGALSNLLSRTITSEYVHR 201
Query: 103 KDKKQK--------FGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGHNLE 149
K + FG + +I ++ E + F FE G YIGP+DGH++
Sbjct: 202 AKKDLEAFLEGLPMFGKSVLKI---AKRAEESLKTLFTPGMLFEAFGFEYIGPIDGHDIG 258
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKA-------------MLPLKLQQ---------- 186
L L+ VK D AVLIHV+T+K K + P +Q
Sbjct: 259 KLVETLENVKRFDD--AVLIHVLTKKGKGYPAAEANPSLFHGVGPFDVQTGKVHKGKGGP 316
Query: 187 ---TRLFCKIL-----DNR--------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T +F + L DN M GTGL F K FP R FDVGIAEQHAVTFAA
Sbjct: 317 ASYTGVFGEALKRLAQDNEKIVAITAAMPDGTGLTPFAKEFPARFFDVGIAEQHAVTFAA 376
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLAAEG +P A+YSSFLQR FDQ+ HDV LQ+LPV FAIDRAG+VG DGPTH G FD +
Sbjct: 377 GLAAEGFRPVVALYSSFLQRGFDQLCHDVCLQELPVVFAIDRAGVVGNDGPTHHGVFDLS 436
Query: 291 FMACLPNMVVM 301
++ LP + VM
Sbjct: 437 YLRQLPGLTVM 447
>gi|91787629|ref|YP_548581.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas sp. JS666]
gi|118595599|sp|Q12CQ9.1|DXS_POLSJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|91696854|gb|ABE43683.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas sp. JS666]
Length = 635
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 146/369 (39%), Positives = 195/369 (52%), Gaps = 83/369 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ GL E+ +D FG HSSTSISA L GMA+ G++
Sbjct: 89 MGSLRQFGGLSGFPRRDESPYDTFGTAHSSTSISAAL----------GMALAAHQQGEDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN--KALKRLHSNPQ------------FRQLCQEA 99
H +++I +GA A M++EA+NNAGV + K L L+ N QL
Sbjct: 139 HAVAIIGDGAMSAGMAFEALNNAGVHDDCKLLVVLNDNDMSISPPVGALNRYLAQLMSGR 198
Query: 100 FSSKDKKQKFGGQMHEIDA----FSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLED 150
F + K G Q+ + ++ +EA ++ A FE+ G YIGP+DGH+LE
Sbjct: 199 FYASAKN--VGKQVLRVAPPLLELAKRLEAHAKGMVVPATLFENFGFNYIGPIDGHDLES 256
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAMLPLKL 184
L L+ +K + P +HV+T+K +K+ P K
Sbjct: 257 LIPTLENIKHLKGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAMGLQKSSAPAKR 314
Query: 185 QQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T++F + L D R+ G G+G+ F K FP R DVGIAEQHAVTFAAG
Sbjct: 315 TFTQVFGQWLCDMAEQDKRLVGITPAMREGSGMVEFHKRFPGRYHDVGIAEQHAVTFAAG 374
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+A EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+D F
Sbjct: 375 MACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIPF 434
Query: 292 MACLPNMVV 300
+ C+PNM V
Sbjct: 435 LRCIPNMSV 443
>gi|153940819|ref|YP_001391203.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum F
str. Langeland]
gi|384462222|ref|YP_005674817.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum F
str. 230613]
gi|152936715|gb|ABS42213.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum F
str. Langeland]
gi|295319239|gb|ADF99616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum F
str. 230613]
Length = 622
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 197/372 (52%), Gaps = 88/372 (23%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
T+RQ GL E+ +D F GHSSTSISA L GMA RD+ G+NN
Sbjct: 92 NTLRQYGGLSGFPKICESPYDVFETGHSSTSISAAL----------GMARARDIKGENNK 141
Query: 55 VISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQF 92
VI+VI +GA M+ EA+N N G ++ L ++ +P +
Sbjct: 142 VIAVIGDGALTGGMALEALNDLGFNKTDLIIILNDNQMSIAENVGGMSSYLSKVRLDPTY 201
Query: 93 RQLCQEAFSSKDKKQKFGGQMHEIDAFSRE-IEAGSR-----ACFFEDLGLYYIGPVDGH 146
+L +E ++ +K G M A S E ++ G + FE+LG+ Y+GP+DGH
Sbjct: 202 NKLKKEVNNTLNKIPNVGKGM----ARSLERVKNGIKQMIVPGMLFENLGIKYLGPIDGH 257
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML-----PLK------------------ 183
++++L+ V+K K I P VLIH IT+K K P K
Sbjct: 258 DIKELSKVMKMAKNINGP--VLIHTITKKGKGYAYAEKKPDKFHGIGPFDCDSGEVNSKT 315
Query: 184 -LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
L +++F + L D + M GTGL F + FP R FDVGIAEQHAVT A
Sbjct: 316 CLTYSKVFGEELTKIAKEDKKVVAITAAMKDGTGLRKFGETFPKRFFDVGIAEQHAVTLA 375
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AG+A EGLKP A+YS+FLQR +DQ+ HD+ +Q LPV IDRAG+VG+DG TH G FD
Sbjct: 376 AGIATEGLKPVFAVYSTFLQRAYDQILHDICIQNLPVVLGIDRAGIVGSDGETHQGIFDL 435
Query: 290 TFMACLPNMVVM 301
++++ LPNM +M
Sbjct: 436 SYLSSLPNMTIM 447
>gi|296491818|tpg|DAA33851.1| TPA: putative chloroplast 1-deoxy-D-xylulose 5-phosphate
synthase-like [Bos taurus]
Length = 409
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 194/371 (52%), Gaps = 92/371 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+V+D FG HSSTSISA L GMA+ G N
Sbjct: 10 MHTLRQLGGISGFPQRAESVYDTFGTAHSSTSISAAL----------GMALAAKRKGDNR 59
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
H +++I +GA A M++EA+NNAGV LN+ L +L S Q
Sbjct: 60 HAVAIIGDGAMSAGMAFEALNNAGVADCNLLVVLNDNDMSISPPVGALNRYLAQLMSG-Q 118
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGH 146
F ++K+ + + + F++ E ++ A FE G YIGP+DGH
Sbjct: 119 FYA------AAKNVGKTVLRPVPPLLEFAKRFEQQAKGMVVPATLFEKFGFNYIGPIDGH 172
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAML 180
+L+ L L+ +K++ P +HV+T+K K
Sbjct: 173 DLDSLIPTLENIKSLKGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPSVGLTKPAT 230
Query: 181 PLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVT 227
P K T++F + L D R+ G G+G+ F+K FP R +DVGIAEQHAVT
Sbjct: 231 PPKQTFTQVFGQWLCDMAAQDPRLVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVT 290
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAG+A EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+
Sbjct: 291 FAAGMACEGVKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 350
Query: 288 DTTFMACLPNM 298
D F+ C+PNM
Sbjct: 351 DIPFVRCIPNM 361
>gi|351729178|ref|ZP_08946869.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax radicis N35]
Length = 627
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 139/364 (38%), Positives = 192/364 (52%), Gaps = 78/364 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ G+N
Sbjct: 93 MHTLRQLGGISGFPQRAESAYDTFGTAHSSTSISAAL----------GMALAAKRKGENR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHS-------------NPQFRQLCQEAF 100
H +++I +GA A M++EA+NN GV + L + + N QL F
Sbjct: 143 HAVAIIGDGAMSAGMAFEALNNGGVADANLLVVLNDNDMSISPPVGALNRYLAQLMSGQF 202
Query: 101 --SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAY 153
++K+ + + + F++ E ++ A FE G YIGP+DGH+L+ L
Sbjct: 203 YAAAKNVGKTVLRPVPPLLEFAKRFEQHAKGMVVPATLFEKFGFNYIGPIDGHDLDSLIP 262
Query: 154 VLKQVKAIPDPGAVLIHVITEK--------------------------EKAMLPLKLQQT 187
L+ +K++ P +HV+T+K K P K T
Sbjct: 263 TLENIKSLKGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPSVGLTKPATPPKPTFT 320
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F + L D R+ G G+G+ F+K FP R +DVGIAEQHAVTFAAG+A
Sbjct: 321 QVFGQWLCDMAAHDTRLVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVTFAAGMAC 380
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+D F+ C
Sbjct: 381 EGVKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIPFVRC 440
Query: 295 LPNM 298
+PNM
Sbjct: 441 IPNM 444
>gi|253701623|ref|YP_003022812.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sp. M21]
gi|251776473|gb|ACT19054.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. M21]
Length = 646
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 151/371 (40%), Positives = 190/371 (51%), Gaps = 85/371 (22%)
Query: 1 MRTIRQTCGL----ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVI 56
+RT+ G E+ HD F VGHSSTSISAG VG AV RDL G++N V+
Sbjct: 92 LRTLGGISGFPKRAESPHDCFDVGHSSTSISAG----------VGFAVARDLKGEHNKVL 141
Query: 57 SVIVEGATIARMSYEAINNAGVLNKALKRLH--------------SNPQFRQLCQEAFSS 102
+VI +G+ ++ E +N+AG LNK L + SN R + E
Sbjct: 142 TVIGDGSMTGGLALEGLNHAGELNKDLVVILNDNEMSISENVGALSNLLSRTITSEYVHR 201
Query: 103 KDKKQK--------FGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGHNLE 149
K + FG + +I ++ E + F FE G YIGP+DGH++E
Sbjct: 202 AKKDLEAFLEGLPMFGKSVLKI---AKRAEESLKTLFTPGMLFEAFGFEYIGPIDGHDIE 258
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------------------- 186
L L+ VK D AVLIHV+T+K K +
Sbjct: 259 KLVETLENVKRFDD--AVLIHVLTKKGKGYPAAEANPSLFHGVGPFDAATGKVHKGKGGP 316
Query: 187 ---TRLFCKIL-----DNR--------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T +F + L DN M GTGL F K FP R FDVGIAEQHAVTFAA
Sbjct: 317 ASYTGVFGETLKRLAQDNEKIVAITAAMPDGTGLTPFAKEFPERFFDVGIAEQHAVTFAA 376
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLAAEG +P A+YSSFLQR FDQ+ HDV LQ+LPV FAIDRAG+VG DGPTH G FD +
Sbjct: 377 GLAAEGFRPVVALYSSFLQRGFDQLCHDVCLQELPVVFAIDRAGVVGNDGPTHHGVFDLS 436
Query: 291 FMACLPNMVVM 301
++ LP + VM
Sbjct: 437 YLRQLPGLTVM 447
>gi|407684431|ref|YP_006799605.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii str.
'English Channel 673']
gi|407246042|gb|AFT75228.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii str.
'English Channel 673']
Length = 626
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 144/367 (39%), Positives = 193/367 (52%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D F VGHSSTSISAGL GMAV + GKN
Sbjct: 95 MSTIRQKNGLHPFPWPPESDYDTFAVGHSSTSISAGL----------GMAVAAEKEGKNR 144
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
V++VI +GA A M++EA+N+AG + K + + ++ + R L
Sbjct: 145 KVVAVIGDGAMTAGMAFEALNHAGDIKKDMVVVLNDNEMSISENVGALNSHLARLLTGNF 204
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
F+S +D +K + I F+ E + FE+LG YIGP+DGH++ +
Sbjct: 205 FNSIRDGGKKLLSNVPPIKEFASRAEEHIKGMVVPGTIFEELGFNYIGPIDGHDVNGVVD 264
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ---------------------T 187
L+ ++ P L+HV+T+K K P+K +
Sbjct: 265 TLRNMRKFDGPQ--LLHVVTKKGKGYAVAEEDPIKFHAVPKFNPADNALPKSKPSAPTYS 322
Query: 188 RLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
+F K L D + M G+G+ F + FP + FDV IAEQHAVTF AGLA
Sbjct: 323 AIFGKWLCDMAAQDPKLMAVTPAMREGSGMVEFSQRFPEQYFDVAIAEQHAVTFGAGLAK 382
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
+G+ AIYSSFLQR +DQ+ HDV +Q LPV FAIDRAG+VGADGPTH GAFD F+ C
Sbjct: 383 DGMNAVVAIYSSFLQRAYDQLIHDVAIQDLPVLFAIDRAGIVGADGPTHQGAFDIAFLRC 442
Query: 295 LPNMVVM 301
+PNMVVM
Sbjct: 443 IPNMVVM 449
>gi|358422210|ref|XP_001257222.3| PREDICTED: 1-deoxy-D-xylulose-5-phosphate synthase, partial [Bos
taurus]
Length = 419
Score = 216 bits (551), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 194/371 (52%), Gaps = 92/371 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+V+D FG HSSTSISA L GMA+ G N
Sbjct: 15 MHTLRQLGGISGFPQRAESVYDTFGTAHSSTSISAAL----------GMALAAKRKGDNR 64
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
H +++I +GA A M++EA+NNAGV LN+ L +L S Q
Sbjct: 65 HAVAIIGDGAMSAGMAFEALNNAGVADCNLLVVLNDNDMSISPPVGALNRYLAQLMSG-Q 123
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGH 146
F ++K+ + + + F++ E ++ A FE G YIGP+DGH
Sbjct: 124 FYA------AAKNVGKTVLRPVPPLLEFAKRFEQQAKGMVVPATLFEKFGFNYIGPIDGH 177
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAML 180
+L+ L L+ +K++ P +HV+T+K K
Sbjct: 178 DLDSLIPTLENIKSLKGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPSVGLTKPAT 235
Query: 181 PLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVT 227
P K T++F + L D R+ G G+G+ F+K FP R +DVGIAEQHAVT
Sbjct: 236 PPKQTFTQVFGQWLCDMAAQDPRLVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVT 295
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAG+A EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+
Sbjct: 296 FAAGMACEGVKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 355
Query: 288 DTTFMACLPNM 298
D F+ C+PNM
Sbjct: 356 DIPFVRCIPNM 366
>gi|407688359|ref|YP_006803532.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291739|gb|AFT96051.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 626
Score = 216 bits (551), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 144/367 (39%), Positives = 193/367 (52%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D F VGHSSTSISAGL GMAV + GKN
Sbjct: 95 MSTIRQKNGLHPFPWPPESDYDTFAVGHSSTSISAGL----------GMAVAAEKEGKNR 144
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
V++VI +GA A M++EA+N+AG + K + + ++ + R L
Sbjct: 145 KVVAVIGDGAMTAGMAFEALNHAGDIKKDMVVVLNDNEMSISENVGALNSHLARLLTGNF 204
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
F+S +D +K + I F+ E + FE+LG YIGP+DGH++ +
Sbjct: 205 FNSIRDGGKKLLSNVPPIKEFASRAEEHIKGMVVPGTIFEELGFNYIGPIDGHDVNGVVD 264
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ---------------------T 187
L+ ++ P L+HV+T+K K P+K +
Sbjct: 265 TLRNMRKFDGPQ--LLHVVTKKGKGYAVAEEDPIKFHAVPKFNPADNALPKSKPSAPTYS 322
Query: 188 RLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
+F K L D + M G+G+ F + FP + FDV IAEQHAVTF AGLA
Sbjct: 323 AIFGKWLCDMAAQDPKLMAVTPAMREGSGMVEFSQRFPEQYFDVAIAEQHAVTFGAGLAK 382
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
+G+ AIYSSFLQR +DQ+ HDV +Q LPV FAIDRAG+VGADGPTH GAFD F+ C
Sbjct: 383 DGMNAVVAIYSSFLQRAYDQLIHDVAIQDLPVLFAIDRAGIVGADGPTHQGAFDIAFLRC 442
Query: 295 LPNMVVM 301
+PNMVVM
Sbjct: 443 IPNMVVM 449
>gi|313669089|ref|YP_004049373.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria lactamica
020-06]
gi|313006551|emb|CBN88015.1| putative 1-deoxyxylulose-5-phosphate synthase [Neisseria lactamica
020-06]
Length = 641
Score = 216 bits (551), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 149/385 (38%), Positives = 195/385 (50%), Gaps = 97/385 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGGDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMELAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VL+ ++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLEDLRGRKGP--QLLHVITKKGNGYKLAENDPVKYHAVAKLPKDVSDGP 318
Query: 176 ------EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRC 215
EK P K T++F K L +R M G+GL F++ FP R
Sbjct: 319 KTATPSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRY 378
Query: 216 FDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGL 275
FDVGIAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+
Sbjct: 379 FDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGI 438
Query: 276 VGADGPTHCGAFDTTFMACLPNMVV 300
VGADGPTH G +D +F+ C+PNM+V
Sbjct: 439 VGADGPTHAGLYDLSFLRCIPNMIV 463
>gi|254374308|ref|ZP_04989790.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella novicida
GA99-3548]
gi|151572028|gb|EDN37682.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella novicida
GA99-3548]
Length = 615
Score = 216 bits (551), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 196/364 (53%), Gaps = 77/364 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ G+ E+ +D FGVGHSSTSISA L GMA+ L GK+++
Sbjct: 93 TIKKDGGISGFPKRSESEYDTFGVGHSSTSISAAL----------GMAIADRLQGKSSNT 142
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF-- 100
++VI +GA M++EA+N+AG +LN + N F ++ F
Sbjct: 143 VAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSAHFSKIISGGFYN 202
Query: 101 SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVL 155
S ++K ++ + I F +++E ++ A FFEDLG YY+GP+DGH++ +L L
Sbjct: 203 SIREKGKEVLKNIPPIFEFVKKVETQTKGMFVPANFFEDLGFYYVGPIDGHDVTELVKTL 262
Query: 156 KQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ--------------------TRLF 190
+ +K G L+HVIT+K K P+K + +F
Sbjct: 263 RILK--DHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENLITKASKPTYSNIF 320
Query: 191 CKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGL 237
+ D R+ G G+ L F + +P R FDV IAEQHAVTFA GLA +GL
Sbjct: 321 GNWICQKAAKDKRLVGITPAMKEGSDLIRFSQLYPHRYFDVAIAEQHAVTFAGGLACQGL 380
Query: 238 KPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPN 297
KP AIYS+FLQR +DQV HD+ LQ L V +A+DRAGLVGADG TH G+FD FM C+PN
Sbjct: 381 KPVVAIYSTFLQRAYDQVIHDIALQNLDVLYAVDRAGLVGADGATHDGSFDLAFMRCIPN 440
Query: 298 MVVM 301
V+M
Sbjct: 441 HVIM 444
>gi|337755422|ref|YP_004647933.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella sp. TX077308]
gi|336447027|gb|AEI36333.1| 1-deoxy-D-xylulose 5-phosphate synthase [Francisella sp. TX077308]
Length = 618
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 195/363 (53%), Gaps = 76/363 (20%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ G+ E+ +D FGVGHSSTSISA L GMA+ L GK++
Sbjct: 93 TIKKDGGISGFPKRSESEYDTFGVGHSSTSISAAL----------GMAIADRLQGKHSSS 142
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF-- 100
I+VI +GA M++EA+N+AG +LN + N F ++ F
Sbjct: 143 IAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSAHFSKIISGGFYN 202
Query: 101 SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVL 155
S ++K ++ + + F ++IE ++ A FFEDLG YY+GP+DGHN+ +L L
Sbjct: 203 SIREKGKEVLKNIPPMFEFVKKIETQTKGMFVPANFFEDLGFYYVGPIDGHNVVELVKTL 262
Query: 156 KQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ-------------------TRLFC 191
+ +K G L+HVIT+K K P+K + +F
Sbjct: 263 RILK--DHRGPKLLHVITKKGKGYTKAESDPIKFHHVAPCFHSGDTQSKASKPTYSNIFG 320
Query: 192 KIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLK 238
+ D R+ G G+ L F K + R FDV IAEQHAVTFA GLA +GLK
Sbjct: 321 NWICQKAAKDERLVGVTPAMKEGSDLIRFSKQYSNRYFDVAIAEQHAVTFAGGLACQGLK 380
Query: 239 PFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNM 298
P AIYS+FLQR +DQV HD+ LQ L V +A+DRAGLVGADG TH G+FD +FM C+PN
Sbjct: 381 PVVAIYSTFLQRAYDQVIHDIALQDLDVLYAVDRAGLVGADGATHDGSFDISFMRCIPNH 440
Query: 299 VVM 301
V+M
Sbjct: 441 VIM 443
>gi|261380775|ref|ZP_05985348.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria subflava NJ9703]
gi|284796238|gb|EFC51585.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria subflava NJ9703]
Length = 629
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 149/377 (39%), Positives = 193/377 (51%), Gaps = 89/377 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMAV LG N
Sbjct: 91 MHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAVADKQLGNNR 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN----PQFRQ------- 94
+++I +GA A ++EA+N AG +LN + N P++
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVILNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 95 ---LCQEAFSSKDKKQKFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
L S K G M ++I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTIKAQSSKVLDKLPGAMELAQKVENKIKTLAGEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEK---------------AMLP------- 181
DGHN+E+L VLK ++ P L+HVIT+K + LP
Sbjct: 261 DGHNVENLVDVLKDLRGRKGPQ--LLHVITKKGNGYKFAENDPVKYHAVSKLPSEVPAPE 318
Query: 182 -----LKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQ 223
K T++F + L D R M G+GL F++ FP R FDVGIAEQ
Sbjct: 319 VKPAAAKPTYTQVFGQWLCDQAAADERLVAITPAMREGSGLVEFEQRFPDRYFDVGIAEQ 378
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
HAVTFA GLA EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAG+VGADGPTH
Sbjct: 379 HAVTFAGGLACEGIKPVVAIYSTFLQRAYDQLVHDVALQNLPVLFAIDRAGIVGADGPTH 438
Query: 284 CGAFDTTFMACLPNMVV 300
G +D +F+ C+PNM++
Sbjct: 439 AGLYDLSFLRCVPNMII 455
>gi|325266796|ref|ZP_08133468.1| 1-deoxy-D-xylulose-5-phosphate synthase [Kingella denitrificans
ATCC 33394]
gi|324981728|gb|EGC17368.1| 1-deoxy-D-xylulose-5-phosphate synthase [Kingella denitrificans
ATCC 33394]
Length = 635
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 151/378 (39%), Positives = 194/378 (51%), Gaps = 90/378 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D FGVGHSSTSI A L GMAV L G N
Sbjct: 92 MHTIRQFGGLAGFPKRSESEYDDFGVGHSSTSIGAAL----------GMAVADRLSGSNA 141
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN----PQF--------- 92
++VI +GA A ++EA+NNAG VLN + N P++
Sbjct: 142 RSVAVIGDGAMTAGQAFEALNNAGDMKVNLLVVLNDNEMSISPNVGALPKYLARNVMRDM 201
Query: 93 ----RQLCQEAFSSKDK-----KQKFGGQMHEIDAFSREIEAGSRA-CFFEDLGLYYIGP 142
++ Q + DK K+ H I + E E ++ FE+ G Y G
Sbjct: 202 RGVLHEIKQHSTKVLDKLPASVKEMAQKAEHTIKTIASESEHVQQSLSLFENFGFAYTGA 261
Query: 143 VDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-----------------------EKA- 178
VDGHN+ L VLK+++ P L+H+IT+K E A
Sbjct: 262 VDGHNIGQLVSVLKELRKREGPQ--LLHIITKKGHGYQLAENDPVKYHAIGKQPAPESAG 319
Query: 179 ---MLPLKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAE 222
P T++F + L D R M G+GL F++ FP R FDVGIAE
Sbjct: 320 ATQKQPAPPTYTQVFGQWLCDQAAADQRLVAITPAMREGSGLVEFEQRFPDRYFDVGIAE 379
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAGLA +G+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAG+VGADGPT
Sbjct: 380 QHAVTFAAGLACQGIKPVVAIYSTFLQRAYDQLLHDVALQNLPVLFAIDRAGIVGADGPT 439
Query: 283 HCGAFDTTFMACLPNMVV 300
H GA+D +F+ C+PNMV+
Sbjct: 440 HAGAYDLSFLRCVPNMVI 457
>gi|385337403|ref|YP_005891276.1| 1-deoxy-D-xylulose-5-phosphate synthase
(1-deoxyxylulose-5-phosphate synthase; DXP synthase;
DXPS) [Neisseria meningitidis WUE 2594]
gi|433476288|ref|ZP_20433623.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
88050]
gi|433516403|ref|ZP_20473165.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
2004090]
gi|433518378|ref|ZP_20475117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
96023]
gi|433524758|ref|ZP_20481413.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
97020]
gi|433527636|ref|ZP_20484248.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM3652]
gi|433531136|ref|ZP_20487716.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM3642]
gi|433532023|ref|ZP_20488590.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
2007056]
gi|433535335|ref|ZP_20491867.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
2001212]
gi|319409817|emb|CBY90125.1| 1-deoxy-D-xylulose-5-phosphate synthase
(1-deoxyxylulose-5-phosphate synthase; DXP synthase;
DXPS) [Neisseria meningitidis WUE 2594]
gi|432208143|gb|ELK64122.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
88050]
gi|432251255|gb|ELL06626.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
2004090]
gi|432251688|gb|ELL07051.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
96023]
gi|432257809|gb|ELL13102.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
97020]
gi|432264577|gb|ELL19779.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM3642]
gi|432266536|gb|ELL21719.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
NM3652]
gi|432268668|gb|ELL23835.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
2007056]
gi|432269967|gb|ELL25115.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
2001212]
Length = 637
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 148/381 (38%), Positives = 194/381 (50%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKQLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VL+ ++ P L+HVIT+K
Sbjct: 261 DGHNIENLVDVLEDLRGRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCIPNMIV 459
>gi|56708107|ref|YP_170003.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110670578|ref|YP_667135.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis FSC198]
gi|134301918|ref|YP_001121887.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis WY96-3418]
gi|254370591|ref|ZP_04986596.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis FSC033]
gi|379717348|ref|YP_005305684.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis TIGB03]
gi|379725952|ref|YP_005318138.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis TI0902]
gi|385794772|ref|YP_005831178.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis NE061598]
gi|421751724|ref|ZP_16188763.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis AS_713]
gi|421753579|ref|ZP_16190570.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis 831]
gi|421755653|ref|ZP_16192595.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis 80700075]
gi|421757305|ref|ZP_16194187.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis 80700103]
gi|421759164|ref|ZP_16195998.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis 70102010]
gi|424674483|ref|ZP_18111401.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis 70001275]
gi|81597477|sp|Q5NG39.1|DXS_FRATT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|123359472|sp|Q14HJ1.1|DXS_FRAT1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|166198618|sp|A4IXW5.1|DXS_FRATW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|56604599|emb|CAG45651.1| 1-deoxy-D-xylulose 5-phosphate synthase [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110320911|emb|CAL09034.1| 1-deoxy-D-xylulose 5-phosphate synthase [Francisella tularensis
subsp. tularensis FSC198]
gi|134049695|gb|ABO46766.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis WY96-3418]
gi|151568834|gb|EDN34488.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis FSC033]
gi|282159307|gb|ADA78698.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis NE061598]
gi|377827401|gb|AFB80649.1| 1-deoxy-D-xylulose 5-phosphate synthase [Francisella tularensis
subsp. tularensis TI0902]
gi|377829025|gb|AFB79104.1| 1-deoxy-D-xylulose 5-phosphate synthase [Francisella tularensis
subsp. tularensis TIGB03]
gi|409086845|gb|EKM86958.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis 831]
gi|409087061|gb|EKM87171.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis AS_713]
gi|409087811|gb|EKM87899.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis 80700075]
gi|409091228|gb|EKM91231.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis 70102010]
gi|409092760|gb|EKM92727.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis 80700103]
gi|417434961|gb|EKT89893.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis 70001275]
Length = 615
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 196/364 (53%), Gaps = 77/364 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ G+ E+ +D FGVGHSSTSISA L GMA+ L GK+++
Sbjct: 93 TIKKDGGISGFPKRSESEYDTFGVGHSSTSISAAL----------GMAIADRLQGKSSNT 142
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF-- 100
++VI +GA M++EA+N+AG +LN + N F ++ F
Sbjct: 143 VAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSAHFSKIISGGFYN 202
Query: 101 SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVL 155
S ++K ++ + I F +++E ++ A FFEDLG YY+GP+DGH++ +L L
Sbjct: 203 SIREKGKEVLKNIPPIFEFVKKVETQTKGMFVPANFFEDLGFYYVGPIDGHDVTELVKTL 262
Query: 156 KQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ--------------------TRLF 190
+ +K G L+HVIT+K K P+K + +F
Sbjct: 263 RILK--DHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENITTKISKPTYSNIF 320
Query: 191 CKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGL 237
+ D R+ G G+ L F + +P R FDV IAEQHAVTFA GLA +GL
Sbjct: 321 GDWICQKAAKDKRLVGITPAMKEGSDLIRFSQLYPHRYFDVAIAEQHAVTFAGGLACQGL 380
Query: 238 KPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPN 297
KP AIYS+FLQR +DQV HD+ LQ L V +A+DRAGLVGADG TH G+FD FM C+PN
Sbjct: 381 KPVVAIYSTFLQRAYDQVIHDIALQNLDVLYAVDRAGLVGADGATHDGSFDLAFMRCIPN 440
Query: 298 MVVM 301
V+M
Sbjct: 441 HVIM 444
>gi|254369377|ref|ZP_04985389.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. holarctica FSC022]
gi|157122327|gb|EDO66467.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. holarctica FSC022]
Length = 615
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 196/364 (53%), Gaps = 77/364 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ G+ E+ +D FGVGHSSTSISA L GMA+ L GK+++
Sbjct: 93 TIKKDGGISGFPKRSESEYDTFGVGHSSTSISAAL----------GMAIADRLQGKSSNT 142
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF-- 100
++VI +GA M++EA+N+AG +LN + N F ++ F
Sbjct: 143 VAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSAHFSKIISGGFYN 202
Query: 101 SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVL 155
S ++K ++ + I F +++E ++ A FFEDLG YY+GP+DGH++ +L L
Sbjct: 203 SIREKGKEVLKNIPPIFEFVKKVETQTKGMFVPANFFEDLGFYYVGPIDGHDVTELVKTL 262
Query: 156 KQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ--------------------TRLF 190
+ +K G L+HVIT+K K P+K + +F
Sbjct: 263 RILK--DHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENITTKISKPTYSNIF 320
Query: 191 CKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGL 237
+ D R+ G G+ L F + +P R FDV IAEQHAVTFA GLA +GL
Sbjct: 321 GDWICQKAAKDKRLVGITPAMKEGSDLIRFSQLYPHRYFDVAIAEQHAVTFAGGLACQGL 380
Query: 238 KPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPN 297
KP AIYS+FLQR +DQV HD+ LQ L V +A+DRAGLVGADG TH G+FD FM C+PN
Sbjct: 381 KPVVAIYSTFLQRAYDQVIHDIALQNLDVLYAVDRAGLVGADGATHDGSFDLAFMRCIPN 440
Query: 298 MVVM 301
V+M
Sbjct: 441 HVIM 444
>gi|338210345|ref|YP_004654394.1| 1-deoxy-D-xylulose-5-phosphate synthase [Runella slithyformis DSM
19594]
gi|336304160|gb|AEI47262.1| 1-deoxy-D-xylulose-5-phosphate synthase [Runella slithyformis DSM
19594]
Length = 645
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/362 (38%), Positives = 187/362 (51%), Gaps = 87/362 (24%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG-KNNHVISVIVEGATIARMS 69
E+ +D+FGVGHSSTSISA L GMAVG L G KN I+VI +GA M+
Sbjct: 111 ESPYDSFGVGHSSTSISAAL----------GMAVGARLKGAKNQQSIAVIGDGAMTGGMA 160
Query: 70 YEAINNAGVLNKA-----------------------LKRLHSNPQFRQLCQEAFSSKDKK 106
+EA+N+AG LN L + ++ + ++ +E ++ K
Sbjct: 161 FEAMNHAGGLNNTNMLIILNDNCMSIDPNVGALKEYLTDITTSHTYNRVKEEVWNLLGKL 220
Query: 107 QKFGGQMHEIDAFSREIEAGSRACF------FEDLGLYYIGPVDGHNLEDLAYVLKQVKA 160
FG E+ SR +E G +A FE L L Y GP+DGH+++ L +VL +K
Sbjct: 221 SHFGKNAREV--VSR-VEDGLKATLLHQSNLFESLNLRYFGPIDGHDVDHLVHVLNDLKN 277
Query: 161 IPDPGAVLIHVITEKEKAMLPLKLQQTR-------------LFCKILDN----------- 196
IP P L+H +T K K P + QT+ +F KI +
Sbjct: 278 IPGPK--LLHCVTVKGKGFAPAEKDQTKWHSPGKFDKITGEIFRKIYEKPQPPKYQDVFG 335
Query: 197 ------------------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLK 238
M G+ LN+ K P R FDVGIAEQHAVTF+AG+A +G
Sbjct: 336 NTLVELAEQNEKIVGVTPAMPSGSSLNIMMKAMPDRAFDVGIAEQHAVTFSAGMATQGSV 395
Query: 239 PFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNM 298
+C IYS+F+QR +DQV HDV +Q+LPV F +DRAG GADGPTH GA+D +M C+PNM
Sbjct: 396 VYCNIYSTFMQRAYDQVVHDVCIQELPVIFCLDRAGFAGADGPTHHGAYDIAYMRCIPNM 455
Query: 299 VV 300
VV
Sbjct: 456 VV 457
>gi|254874906|ref|ZP_05247616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis MA00-2987]
gi|254840905|gb|EET19341.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. tularensis MA00-2987]
Length = 609
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 196/364 (53%), Gaps = 77/364 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ G+ E+ +D FGVGHSSTSISA L GMA+ L GK+++
Sbjct: 93 TIKKDGGISGFPKRSESEYDTFGVGHSSTSISAAL----------GMAIADRLQGKSSNT 142
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF-- 100
++VI +GA M++EA+N+AG +LN + N F ++ F
Sbjct: 143 VAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSAHFSKIISGGFYN 202
Query: 101 SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVL 155
S ++K ++ + I F +++E ++ A FFEDLG YY+GP+DGH++ +L L
Sbjct: 203 SIREKGKEVLKNIPPIFEFVKKVETQTKGMFVPANFFEDLGFYYVGPIDGHDVTELVKTL 262
Query: 156 KQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ--------------------TRLF 190
+ +K G L+HVIT+K K P+K + +F
Sbjct: 263 RILK--DHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENITTKISKPTYSNIF 320
Query: 191 CKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGL 237
+ D R+ G G+ L F + +P R FDV IAEQHAVTFA GLA +GL
Sbjct: 321 GDWICQKAAKDKRLVGITPAMKEGSDLIRFSQLYPHRYFDVAIAEQHAVTFAGGLACQGL 380
Query: 238 KPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPN 297
KP AIYS+FLQR +DQV HD+ LQ L V +A+DRAGLVGADG TH G+FD FM C+PN
Sbjct: 381 KPVVAIYSTFLQRAYDQVIHDIALQNLDVLYAVDRAGLVGADGATHDGSFDLAFMRCIPN 440
Query: 298 MVVM 301
V+M
Sbjct: 441 HVIM 444
>gi|118497488|ref|YP_898538.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella novicida U112]
gi|195536181|ref|ZP_03079188.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella novicida FTE]
gi|208779286|ref|ZP_03246632.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella novicida FTG]
gi|166198617|sp|A0Q6B9.1|DXS_FRATN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|118423394|gb|ABK89784.1| 1-deoxyxylulose-5-phosphate synthase [Francisella novicida U112]
gi|194372658|gb|EDX27369.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. novicida FTE]
gi|208745086|gb|EDZ91384.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella novicida FTG]
Length = 615
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 196/364 (53%), Gaps = 77/364 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ G+ E+ +D FGVGHSSTSISA L GMA+ L GK+++
Sbjct: 93 TIKKDGGISGFPKRSESEYDTFGVGHSSTSISAAL----------GMAIADRLQGKSSNT 142
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF-- 100
++VI +GA M++EA+N+AG +LN + N F ++ F
Sbjct: 143 VAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSAHFSKIISGGFYN 202
Query: 101 SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVL 155
S ++K ++ + I F +++E ++ A FFEDLG YY+GP+DGH++ +L L
Sbjct: 203 SIREKGKEVLKNIPPIFEFVKKVETQTKGMFVPANFFEDLGFYYVGPIDGHDVTELVKTL 262
Query: 156 KQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ--------------------TRLF 190
+ +K G L+HVIT+K K P+K + +F
Sbjct: 263 RILK--DHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENVITKASKPTYSNIF 320
Query: 191 CKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGL 237
+ D R+ G G+ L F + +P R FDV IAEQHAVTFA GLA +GL
Sbjct: 321 GDWICQKAAKDKRLVGITPAMKEGSDLIRFSQLYPHRYFDVAIAEQHAVTFAGGLACQGL 380
Query: 238 KPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPN 297
KP AIYS+FLQR +DQV HD+ LQ L V +A+DRAGLVGADG TH G+FD FM C+PN
Sbjct: 381 KPVVAIYSTFLQRAYDQVIHDIALQNLDVLYAVDRAGLVGADGATHDGSFDLAFMRCIPN 440
Query: 298 MVVM 301
V+M
Sbjct: 441 HVIM 444
>gi|187931658|ref|YP_001891642.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella tularensis
subsp. mediasiatica FSC147]
gi|229813278|sp|B2SGK5.1|DXS_FRATM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|187712567|gb|ACD30864.1| 1-deoxyxylulose-5-phosphate synthase [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 615
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 196/364 (53%), Gaps = 77/364 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TI++ G+ E+ +D FGVGHSSTSISA L GMA+ L GK+++
Sbjct: 93 TIKKDGGISGFPKRSESEYDTFGVGHSSTSISAAL----------GMAIADRLQGKSSNT 142
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF-- 100
++VI +GA M++EA+N+AG +LN + N F ++ F
Sbjct: 143 VAVIGDGAITGGMAFEALNHAGGIKEDILVILNDNEMSISDNVGGLSAHFSKIISGGFYN 202
Query: 101 SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVL 155
S ++K ++ + I F +++E ++ A FFEDLG YY+GP+DGH++ +L L
Sbjct: 203 SIREKGKEVLKNIPPIFEFVKKVETQTKGMFVPANFFEDLGFYYVGPIDGHDVTELVKTL 262
Query: 156 KQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQ--------------------TRLF 190
+ +K G L+HVIT+K K P+K + +F
Sbjct: 263 RILK--DHKGPKLLHVITKKGKGYTKAESDPIKFHHVAPSFHSGENITTKISKPTYSNIF 320
Query: 191 CKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGL 237
+ D R+ G G+ L F + +P R FDV IAEQHAVTFA GLA +GL
Sbjct: 321 GDWICQKAAKDKRLVGITPAMKEGSDLIRFSQLYPHRYFDVAIAEQHAVTFAGGLACQGL 380
Query: 238 KPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPN 297
KP AIYS+FLQR +DQV HD+ LQ L V +A+DRAGLVGADG TH G+FD FM C+PN
Sbjct: 381 KPVVAIYSTFLQRAYDQVIHDIALQNLDVLYAVDRAGLVGADGATHDGSFDLAFMRCIPN 440
Query: 298 MVVM 301
V+M
Sbjct: 441 HVIM 444
>gi|218767553|ref|YP_002342065.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
Z2491]
gi|433480565|ref|ZP_20437846.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
63041]
gi|433514179|ref|ZP_20470962.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
63049]
gi|433519682|ref|ZP_20476403.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
65014]
gi|433540815|ref|ZP_20497270.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
63006]
gi|13124127|sp|Q9JW13.1|DXS_NEIMA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|121051561|emb|CAM07859.1| putative 1-deoxyxylulose-5-phosphate synthase [Neisseria
meningitidis Z2491]
gi|432213842|gb|ELK69752.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
63041]
gi|432245667|gb|ELL01132.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
63049]
gi|432255673|gb|ELL11002.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
65014]
gi|432277830|gb|ELL32876.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
63006]
Length = 637
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 148/381 (38%), Positives = 194/381 (50%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKQLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VL+ ++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLEDLRGRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCIPNMIV 459
>gi|374308630|ref|YP_005055061.1| 1-deoxy-D-xylulose-5-phosphate synthase [Filifactor alocis ATCC
35896]
gi|320120567|gb|EFE29003.2| 1-deoxy-D-xylulose-5-phosphate synthase [Filifactor alocis ATCC
35896]
Length = 623
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/356 (37%), Positives = 182/356 (51%), Gaps = 80/356 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ HD FGVGH+STSISA G A+ RD +NN VI++I +G+ M+Y
Sbjct: 104 ESEHDCFGVGHASTSISAA----------TGFAISRDQKKENNEVIAIIGDGSLTGGMAY 153
Query: 71 EAIN----------------------NAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA++ N G +++ L R+ S+ +++ E K
Sbjct: 154 EALDHAGHLGLNMTVILNDNDMSIDKNVGSMSEYLTRVRSDSTYKRTKNELEGFLKKIPA 213
Query: 109 FGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
G +M +I D+ + GS FFE+LG Y GP++GHNL L VL+ K
Sbjct: 214 LGPKMFDIADSFKDSLRNLVVPGS---FFEELGFKYFGPINGHNLPQLISVLENSKNFDC 270
Query: 164 PGAVLIHVITEKEKAMLPLKLQQ-------------------------TRLFCKIL---- 194
P VLIH IT K K LP + + T +F K +
Sbjct: 271 P--VLIHCITTKGKGYLPAEERPDKFHGTGAYDPKTGQSASSKSTPTYTDIFAKTMIALG 328
Query: 195 --DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS 245
D R+ G GTG+ F K FP R +DVGIAE+HAVT A+ +A +G KP AIYS
Sbjct: 329 KQDKRISGITAAMPSGTGIGAFAKQFPDRSYDVGIAEEHAVTMASAMALDGQKPVVAIYS 388
Query: 246 SFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
+FLQR FDQ+ HDV LQ PV FA+DR G+VG DGPTH G FD +++ +PNMV+M
Sbjct: 389 TFLQRSFDQIIHDVALQNAPVIFALDRGGIVGEDGPTHHGVFDLSYLRMIPNMVIM 444
>gi|289578294|ref|YP_003476921.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter italicus
Ab9]
gi|289528007|gb|ADD02359.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter italicus
Ab9]
Length = 620
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/370 (38%), Positives = 195/370 (52%), Gaps = 86/370 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+R+ GL E+VHD FG GHSSTSISA L G+A RDL G+ V
Sbjct: 88 TLRKFNGLSGFTKRAESVHDVFGAGHSSTSISAAL----------GIAKARDLKGEKYSV 137
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKA--------------LKRLHSNPQFR 93
++VI +GA M+ EA+N+AG VLN L +L ++P +
Sbjct: 138 VAVIGDGALTGGMALEALNDAGRSETNLIVVLNHNEMSISENVGSLSLYLSKLRTDPTYN 197
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+L QE + + G +H+ D+ + + G FFE++G Y+GP+DGH++
Sbjct: 198 KLKQEVDNLLNIAPPIGKSLHKYIEKIKDSVKQLVVPG---MFFEEMGFTYLGPIDGHDV 254
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEK-------------AMLPLKLQQTR------- 188
L VL++ K + P +LIHV+T+K K + P +Q +
Sbjct: 255 GGLIEVLERAKRMKGP--ILIHVVTKKGKGYKFAEKFPEKFHSAAPFDIQTGKFVNEEQE 312
Query: 189 ----LFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F K L M GTGL F K P R FDVGIAEQHA TFAAG
Sbjct: 313 TYSDVFGKTLTEMALKDDEIVAITAAMPEGTGLIHFAKLIPERFFDVGIAEQHATTFAAG 372
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+A +G KP+ A+YS+FLQR +DQ+ HDV +QKLPV FAIDRAG+VG DG TH G FD ++
Sbjct: 373 MAVQGYKPYFAVYSTFLQRAYDQIIHDVCIQKLPVVFAIDRAGIVGEDGETHQGVFDLSY 432
Query: 292 MACLPNMVVM 301
+ +PN+ +M
Sbjct: 433 LRPIPNIAIM 442
>gi|317122004|ref|YP_004102007.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermaerobacter
marianensis DSM 12885]
gi|315591984|gb|ADU51280.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermaerobacter
marianensis DSM 12885]
Length = 638
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 193/370 (52%), Gaps = 83/370 (22%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQT G+ E+ HD GH+ TSIS VG+A RDL G+ +HV
Sbjct: 94 TLRQTGGISGFLKREESPHDVVEAGHAGTSIS----------HAVGLARARDLRGEKHHV 143
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLN--------------KALKRLHSNPQFR 93
++VI +GA A M++EA+N+AG VLN + L ++ ++P +
Sbjct: 144 VAVIGDGALTAGMAFEAMNHAGHLGTDLIVVLNDNSMSIAPNVGGLSRYLTQIRTDPAYT 203
Query: 94 QLCQEAFSSKDKKQKFGGQ-MHEIDAFSREIE-AGSRACFFEDLGLYYIGPVDGHNLEDL 151
++ E ++ + G Q + + F ++ FE LGL Y+GPVDG+ L DL
Sbjct: 204 RMRAELERMLEQLPRVGPQALRWVQRFKDSLKYLVVPGMLFEALGLRYLGPVDGYRLRDL 263
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAMLPL------------------KLQQTR----- 188
VL+ KA+ P VLIHVIT+K K P K++ R
Sbjct: 264 IRVLESAKAMRGP--VLIHVITQKGKGYAPAEGDPWTWHGPKPFNPATGKMEPRRPGEPP 321
Query: 189 ----LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F + L D R M GTG+ F + FP R FDVGIAEQHAVTFAAG
Sbjct: 322 AYTAVFARTLVELAREDPRLVAITAAMPDGTGVATFARTFPERSFDVGIAEQHAVTFAAG 381
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA G +P AIYS+FLQR FDQ HDV LQ+LPV FAIDRAG+VGADG TH G +D +
Sbjct: 382 LALGGFRPVVAIYSTFLQRAFDQAVHDVGLQRLPVIFAIDRAGIVGADGETHQGLYDIAY 441
Query: 292 MACLPNMVVM 301
+ LP V+M
Sbjct: 442 LRPLPGYVLM 451
>gi|160897685|ref|YP_001563267.1| 1-deoxy-D-xylulose-5-phosphate synthase [Delftia acidovorans SPH-1]
gi|160363269|gb|ABX34882.1| deoxyxylulose-5-phosphate synthase [Delftia acidovorans SPH-1]
Length = 638
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 192/364 (52%), Gaps = 78/364 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ GL E+ +D FG HSSTSISA L GMA+ G++
Sbjct: 105 MASLRQFGGLSGFPQRAESPYDTFGTAHSSTSISAAL----------GMALAAKQKGEDR 154
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHS-------------NPQFRQLCQEAF 100
I+VI +GA A M++EA+NNAGV + L + + N QL F
Sbjct: 155 RAIAVIGDGAMTAGMAFEALNNAGVTDANLLVILNDNDMSISPPVGALNRYLAQLMSGQF 214
Query: 101 SSK--DKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAY 153
+K D + Q+ + ++ +E ++ A FE+ G YIGP+DGH+L+ L
Sbjct: 215 YAKARDMGKSVLKQVPPLLELAKRLEQQAKGMVVPATLFENFGFNYIGPIDGHDLDSLIP 274
Query: 154 VLKQVKAIPDPGAVLIHVITEKE--------------------------KAMLPLKLQQT 187
L+ +K++ P +HV+T+K K P K T
Sbjct: 275 TLENIKSLKGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPSVGLVKPATPPKQTFT 332
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F L D R+ G G+G+ F K FP R +DVGIAEQHAVTFAAG+A
Sbjct: 333 QVFGHWLCDMADKDQRLVGITPAMREGSGMVEFHKRFPGRYYDVGIAEQHAVTFAAGMAC 392
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EGLKP AIYS+FLQR +DQ+ HDV LQKLPV FA+DRAGLVGADG TH GA+D F+ C
Sbjct: 393 EGLKPVVAIYSTFLQRGYDQLIHDVALQKLPVVFALDRAGLVGADGATHAGAYDIAFVRC 452
Query: 295 LPNM 298
+P+M
Sbjct: 453 IPHM 456
>gi|365085342|ref|ZP_09327158.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. NO-1]
gi|363417875|gb|EHL24926.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. NO-1]
Length = 633
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 194/371 (52%), Gaps = 92/371 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+++D FG HSSTSISA L GMA+ G+N
Sbjct: 90 MHTLRQLGGISGFPQRAESIYDTFGTAHSSTSISAAL----------GMALAAKRKGENR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
H +++I +GA A M++EA+NNAGV LN+ L +L S Q
Sbjct: 140 HAVAIIGDGAMSAGMAFEALNNAGVADCNLLVVLNDNDMSISPPVGALNRYLAQLMSG-Q 198
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGH 146
F ++K+ + + + ++ E ++ A FE G YIGP+DGH
Sbjct: 199 FYA------AAKNMGKTVLRPVPPLLELAKRFEQQAKGMVVPATLFEKFGFNYIGPIDGH 252
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAML 180
+L+ L L+ +K++ P +HV+T+K K
Sbjct: 253 DLDSLIPTLENIKSLKGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPSVGLTKPAT 310
Query: 181 PLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVT 227
P K T++F + L D R+ G G+G+ F+K FP R +DVGIAEQHAVT
Sbjct: 311 PPKQTFTQVFGQWLCDMAAQDPRLVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVT 370
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAG+A EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+
Sbjct: 371 FAAGMACEGVKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 430
Query: 288 DTTFMACLPNM 298
D F+ C+PNM
Sbjct: 431 DIPFVRCIPNM 441
>gi|291520798|emb|CBK79091.1| 1-deoxy-D-xylulose-5-phosphate synthase [Coprococcus catus GD/7]
Length = 624
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/354 (38%), Positives = 186/354 (52%), Gaps = 87/354 (24%)
Query: 15 DAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSYEAIN 74
DAF GHSSTSISA L G A RDL G++ V++VI +G+ M+YEA+N
Sbjct: 110 DAFDTGHSSTSISAAL----------GYARARDLKGEDRTVVAVIGDGSLTGGMAYEALN 159
Query: 75 NA----------------------GVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
N G L+K L L + + D ++K
Sbjct: 160 NVSHLKSNMIIVLNDNKMSISENVGGLSKHLTALRTRESYMDF------KMDVEKKLKQI 213
Query: 113 MHEIDAFSREIEAGS--------RACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDP 164
H D+ +R ++ + FFED G+ YIGP+DGH+++++ VL +K + +P
Sbjct: 214 PHVGDSVARSVKKSKDSIRQLFVKGGFFEDFGIKYIGPIDGHDIKEMVRVLNALKRLNEP 273
Query: 165 GAVLIHVITEKEKAMLPLK------------------------LQQTRLFCKILDNRMG- 199
V++HV+T+K + +P + L T +F K + R+G
Sbjct: 274 --VVMHVVTQKGRGYVPAEKNPSAFHGVGSFDIATGESLAGKSLTYTSVFSKTI-CRLGK 330
Query: 200 -------------GGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSS 246
GTGL F+K+FP R FDVGIAEQHAVTFAAGLAA G+ PF A+YSS
Sbjct: 331 AHPNVVTICAAMPDGTGLTAFKKYFPDRFFDVGIAEQHAVTFAAGLAAGGMHPFVAVYSS 390
Query: 247 FLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVV 300
FLQR +DQ+ HDV +Q LPV F +DRAGLVGADG TH G FD ++++ +PNM V
Sbjct: 391 FLQRAYDQIIHDVCIQNLPVVFCVDRAGLVGADGETHQGIFDLSYLSMIPNMTV 444
>gi|120610695|ref|YP_970373.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax citrulli
AAC00-1]
gi|166198591|sp|A1TNR1.1|DXS_ACIAC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|120589159|gb|ABM32599.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax citrulli
AAC00-1]
Length = 622
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 193/366 (52%), Gaps = 78/366 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +D FG HSSTSISA L GMA+ G++
Sbjct: 93 MPTLRQLGGLSGFPQRTESEYDTFGTAHSSTSISAAL----------GMAMAARQRGEDR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHS-------------NPQFRQLCQEAF 100
+++I +GA A M++EA+NNAGV + L + + N QL F
Sbjct: 143 RAVAIIGDGAMTAGMAFEALNNAGVADANLLVILNDNDMSISPPVGALNRYLAQLMSGQF 202
Query: 101 --SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAY 153
++K+ + G + + ++ E ++ A FE G YIGP+DGH+L+ L
Sbjct: 203 YAAAKNVGKTVLGPVPPLLELAKRFEQQAKGMVLPATLFEKFGFNYIGPIDGHDLDSLIP 262
Query: 154 VLKQVKAIPDPGAVLIHVITEK--------------------------EKAMLPLKLQQT 187
L+ +K + P +HV+T+K K P K T
Sbjct: 263 TLENIKGLKGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPSVGLTKPATPPKQTFT 320
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F + L D+R+ G G+G+ F+K FP R +DVGIAEQHAVTFAAG+A
Sbjct: 321 QVFGQWLCDMAAQDDRLVGITPAMREGSGMVEFEKRFPGRYYDVGIAEQHAVTFAAGMAC 380
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+D F+ C
Sbjct: 381 EGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIPFVRC 440
Query: 295 LPNMVV 300
+PNM +
Sbjct: 441 IPNMSI 446
>gi|331002439|ref|ZP_08325957.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae oral taxon
107 str. F0167]
gi|330410255|gb|EGG89689.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae oral taxon
107 str. F0167]
Length = 625
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 184/356 (51%), Gaps = 80/356 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ D F GHSSTS+SAGL GMA GRD+ G+N +ISVI +GA M+Y
Sbjct: 104 ESKFDVFNTGHSSTSLSAGL----------GMAFGRDIRGENYRIISVIGDGALTGGMAY 153
Query: 71 EAINNA----------------------GVLNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNA G +N L + + + L + SS +K
Sbjct: 154 EALNNAARIKKNFIMVLNDNEMSISKNVGGMNDYLNNIRTADSYNNLKKAVVSSLEKLPY 213
Query: 109 FGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
G M ID+ R+ + G + FE++G+ Y+GPVDGHN+ L V + K +
Sbjct: 214 MGKPM--IDSI-RQTKNGIKQILIPGMLFENMGVTYLGPVDGHNIFALLKVFDEAKKVEG 270
Query: 164 PGAVLIHVITEKEKAMLPL-------------------------KLQQTRLFCKIL---- 194
P VL+HV+T+K K P K T +F K +
Sbjct: 271 P--VLVHVLTKKGKGYSPAENHPENFHGIGAFDIASGDAKSGSKKPTYTDIFSKKIVELA 328
Query: 195 -DNR--------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS 245
+N+ M G GL F+ FP R FDVGIAEQHA+T AAGL+A GL P +YS
Sbjct: 329 AENKNIVALTAAMPEGCGLLEFRDKFPKRFFDVGIAEQHAITSAAGLSAAGLTPVVCVYS 388
Query: 246 SFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
SFLQR FDQ+ HDV LQ L V FAIDRAGLVGADG TH G FD +F+ C+PNM ++
Sbjct: 389 SFLQRGFDQIVHDVCLQNLHVVFAIDRAGLVGADGETHQGIFDVSFLTCIPNMTLL 444
>gi|393778038|ref|ZP_10366321.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. PBA]
gi|392714924|gb|EIZ02515.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. PBA]
Length = 642
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 192/377 (50%), Gaps = 93/377 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+G G++
Sbjct: 92 MHTLRQLDGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMALGAKTKGEDR 141
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 142 VAIAVIGDGAMTAGMAFEAMNNAGVYRDVPLLVILNDNDMSISPPVGALNRYLARLMSGR 201
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ ++K +K + F++ E ++ A FE+ G YIGP+DG
Sbjct: 202 FYA-------ATKKGIEKVLSVAPPVLEFAKRFEEHAKGMLVPATMFEEFGFNYIGPIDG 254
Query: 146 HNLEDLAYVLKQVKAIPDPG--AVLIHVITEK--------------------------EK 177
H+LE L L+ ++ + G +HV+T K
Sbjct: 255 HDLESLVPTLQNIRELAHAGRGPQFLHVVTRKGQGYKLAEADPVLYHGPGKFDPAEGIRP 314
Query: 178 AMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQH 224
A P + T++F L D R+ G G+G+ F++ FP R +DVGIAEQH
Sbjct: 315 AAKPSRPAYTKVFGDWLCDMAAADARLVGITPAMREGSGMVEFERRFPDRYYDVGIAEQH 374
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFA GLA EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH
Sbjct: 375 AVTFAGGLACEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVLFALDRAGLVGADGATHA 434
Query: 285 GAFDTTFMACLPNMVVM 301
GA+D ++ C+PNM++M
Sbjct: 435 GAYDIAYLRCIPNMLIM 451
>gi|355624221|ref|ZP_09047582.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium sp. 7_3_54FAA]
gi|354821982|gb|EHF06357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium sp. 7_3_54FAA]
Length = 629
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/369 (37%), Positives = 190/369 (51%), Gaps = 85/369 (23%)
Query: 4 IRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVI 56
+RQ GL E+ DAF GHSSTSISAGL GMA GRD+LG+ ++
Sbjct: 90 LRQYGGLSGFPKRKESPFDAFDTGHSSTSISAGL----------GMAQGRDVLGEEYSIV 139
Query: 57 SVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQFRQ 94
SVI +GA M+YEA+NNA G +++ L L ++ +
Sbjct: 140 SVIGDGALTGGMAYEALNNAARLKKNFIIVLNDNKMSISENVGGISRYLSNLRADEGYNL 199
Query: 95 LCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR----ACFFEDLGLYYIGPVDGHNLED 150
L + + K G + +D R + + +FE++G+ Y+GPVDGH+++
Sbjct: 200 LKKNVAGTLAKVPMIGNDL--VDTLLRTKNSIKQFLIPGMWFENMGITYLGPVDGHDVKG 257
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQT----------------------- 187
LA + + K I AVLIHV+T+K K P + +
Sbjct: 258 LAKIFSEAKKINH--AVLIHVMTKKGKGYRPAERNPSSFHGVEPFDIETGKPLGQKLYPS 315
Query: 188 ------RLFCKILDNR---------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
R CK+ + M GTGL F + +P R FDVGIAE+HAVT AAG+
Sbjct: 316 YTDVFSREICKLAETNEKLVAVTAAMPDGTGLKRFSRLYPQRFFDVGIAEEHAVTSAAGM 375
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
AA GLKP +YSSFLQR +DQ+ HDV +Q LPV F +DRAGLVG+DG TH G FD T++
Sbjct: 376 AAAGLKPVVVVYSSFLQRAYDQIVHDVCIQNLPVLFCVDRAGLVGSDGETHQGIFDLTYL 435
Query: 293 ACLPNMVVM 301
+ +PNM V+
Sbjct: 436 SSIPNMSVI 444
>gi|386827785|ref|ZP_10114892.1| 1-deoxy-D-xylulose-5-phosphate synthase [Beggiatoa alba B18LD]
gi|386428669|gb|EIJ42497.1| 1-deoxy-D-xylulose-5-phosphate synthase [Beggiatoa alba B18LD]
Length = 638
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 194/368 (52%), Gaps = 80/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D FGVGHSSTSISA L GMA+ L G N
Sbjct: 95 MHTIRQPHGLSGFPKRTESEYDTFGVGHSSTSISAAL----------GMAIASKLAGINR 144
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQ---EAFSSK- 103
V++VI +GA A M++EA+ +AG ++ L + +P L + SS+
Sbjct: 145 KVMAVIGDGALTAGMAFEALEHAGDVDADLLVILNDNDMSISPNVGGLSNYLAKILSSRF 204
Query: 104 --DKKQKFGGQMHEIDA---FSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
+Q +H I +R E + FE+LG YIGPVDGH+L L
Sbjct: 205 YASVRQGSKQLLHRIPTMRELARRAEEHVKGMVIPGTLFEELGFNYIGPVDGHDLSALIP 264
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLPL-------------------KLQQ-------- 186
L+ +KA+ P +HVIT+K K P+ K+ +
Sbjct: 265 TLRNMKALKGPQ--FLHVITQKGKG-YPIAEDNPCTYHGVTAFDPKTGKMAKKSASAPTY 321
Query: 187 TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D+++ G G+GL F + FP R FDV IAEQH+VT AAGLA
Sbjct: 322 TQIFGQWLCDMAAQDDKLIGITPAMREGSGLVEFSEKFPERYFDVSIAEQHSVTLAAGLA 381
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
EG KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH G FD FM
Sbjct: 382 CEGYKPVVAIYSTFLQRAYDQLLHDVALQNLPVLFAIDRAGLVGADGATHAGTFDIAFMR 441
Query: 294 CLPNMVVM 301
C+PNMV+M
Sbjct: 442 CIPNMVIM 449
>gi|344995962|ref|YP_004798305.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964181|gb|AEM73328.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 616
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/377 (37%), Positives = 198/377 (52%), Gaps = 89/377 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+R+ GL E+++D+F GHSSTSIS L G AV RDL +N++V
Sbjct: 90 TLRKFGGLSGFPKSKESIYDSFDTGHSSTSISVAL----------GFAVARDLKKENHNV 139
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLN--------------KALKRLHSNPQFR 93
I+VI +GA ++YE +NNAG VLN K L ++ + P++
Sbjct: 140 IAVIGDGALTGGLAYEGLNNAGRYNGKLLVVLNDNDMSISKNVGAIAKYLSKVRTKPRYF 199
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFF-----EDLGLYYIGPVDGHNL 148
+L + A S + G + + F R+++ + FF E LG Y GP+DGH++
Sbjct: 200 KLKKAADSLVEGIPVVGKNLSK---FVRKVKGSLKYFFFPGTLFEALGFEYYGPIDGHDI 256
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAM-----LPLKLQ----------------QT 187
E L V + VK P VL+HV+T+K K P K +
Sbjct: 257 ERLCEVFESVKDFERP--VLVHVVTQKGKGYEHAERFPEKFHGVPPFDIETGNHLSDNTS 314
Query: 188 RLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+ F ++L ++ M GTGL+ F K +P R FDVGIAE+HAVTFA
Sbjct: 315 KTFSEVLGDKLCELAKCNPKILAITAAMPDGTGLSKFAKMYPQRFFDVGIAEEHAVTFAG 374
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
LA EG KPF AIYS+FLQR FDQ+ HDV LQ L V F +DRAGLVG DG TH G+FD +
Sbjct: 375 ALAKEGFKPFVAIYSTFLQRAFDQIIHDVCLQNLNVVFCVDRAGLVGEDGETHHGSFDIS 434
Query: 291 FMACLPNMVVM--KDIK 305
+++ +PN+ +M KD K
Sbjct: 435 YLSLIPNLTLMVPKDTK 451
>gi|349610399|ref|ZP_08889750.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria sp. GT4A_CT1]
gi|348610050|gb|EGY59756.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria sp. GT4A_CT1]
Length = 637
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 148/385 (38%), Positives = 193/385 (50%), Gaps = 97/385 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R+ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MYTMRRYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN----PQFRQ------- 94
+++I +GA A ++EA+N AG +LN + N P++
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 95 ---LCQEAFSSKDKKQKFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
L S K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 RGVLSTIKAQSSKVLDKLPGAMELAQKVEHKIKTLAGEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E L VLK ++ P L+HVIT+K
Sbjct: 261 DGHNVEHLVDVLKDLRGRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKDISDDL 318
Query: 176 ------EKAMLPL-KLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRC 215
EK P K T++F K L D+R+ G+GL F++ FP R
Sbjct: 319 KTATSSEKENKPAAKPTYTQVFGKWLCDQAAADSRLAAITPAMREGSGLVEFEQQFPDRY 378
Query: 216 FDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGL 275
FDVGIAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+
Sbjct: 379 FDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGI 438
Query: 276 VGADGPTHCGAFDTTFMACLPNMVV 300
VGADGPTH G +D +F+ C+PNM+V
Sbjct: 439 VGADGPTHAGLYDLSFLRCVPNMIV 463
>gi|410584390|ref|ZP_11321493.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermaerobacter
subterraneus DSM 13965]
gi|410504325|gb|EKP93836.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermaerobacter
subterraneus DSM 13965]
Length = 635
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/373 (38%), Positives = 191/373 (51%), Gaps = 89/373 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQT GL E+ HD GH+ TSIS VG+A RDL G+ +HV
Sbjct: 91 TLRQTGGLSGFLKRDESPHDIVEAGHAGTSIS----------HAVGLARARDLRGEKHHV 140
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLN--------------KALKRLHSNPQFR 93
++VI +GA A M++EA+N+AG VLN + L ++ ++P +
Sbjct: 141 VAVIGDGALTAGMAFEALNHAGHLGTDLLIVLNDNSMSIAPNVGGLARYLTQIRTDPAYE 200
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
++ E ++ + G Q D+ + G FE LG YIGPVDG+ L
Sbjct: 201 RMRAELERVLEQLPRVGSQAVRWLQRFKDSLKYLVVPG---MLFEALGFRYIGPVDGYRL 257
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPL------------------KLQQTR-- 188
DL VL+ +++ P VL+HVIT+K K P K++ R
Sbjct: 258 RDLIRVLESTRSMRGP--VLVHVITQKGKGYAPAEGDPWTWHGPRPFNPATGKMEPARPG 315
Query: 189 -------LFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
+F + L M GTG+ F + FP R FDVGIAEQHAVTF
Sbjct: 316 EPPSYTSVFARTLVELARNEPRLVAITAAMPDGTGVATFARAFPERAFDVGIAEQHAVTF 375
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLA GL+P AIYS+FLQR FDQV HDV LQ+LPV FAIDRAG+VGADG TH G +D
Sbjct: 376 AAGLALGGLRPVVAIYSTFLQRAFDQVVHDVGLQRLPVIFAIDRAGIVGADGETHQGLYD 435
Query: 289 TTFMACLPNMVVM 301
++ LP V+M
Sbjct: 436 IAYLRPLPGFVLM 448
>gi|331091276|ref|ZP_08340117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404723|gb|EGG84262.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium
2_1_46FAA]
Length = 621
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 185/350 (52%), Gaps = 76/350 (21%)
Query: 15 DAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSYEAIN 74
DAF GHSSTSISAGL G R++LG+ +HVISVI +G+ M+YEA+N
Sbjct: 108 DAFDTGHSSTSISAGL----------GYVEAREILGEKHHVISVIGDGSLTGGMAYEALN 157
Query: 75 NAGVLNKAL------KRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR 128
NA LN + +P + + S + G +++ +++ +
Sbjct: 158 NASHLNSNFIIVLNDNNMSISPNVGGMSK-YLDSLRTADAYTGLKKGVESALKQVPVAGK 216
Query: 129 -------------------ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLI 169
FFED+G+ Y+GP+DGH+++ L ++ K + + AVL+
Sbjct: 217 PLVSHLKKTKSSIKQLFVPGMFFEDMGITYLGPIDGHDIKALYRTFEEAKKLNN--AVLV 274
Query: 170 HVITEKEKAMLPL-------------------------KLQQTRLFCKIL------DNR- 197
HVIT+K K LP K T +F K++ D++
Sbjct: 275 HVITKKGKGYLPAEEFPSKFHGTGPFAIETGESLEKKKKDTYTDVFGKVMCDLAAKDSKV 334
Query: 198 ------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRC 251
M GTGL+ F + + R FDVGIAE+HAVTFAAGLAA GLKP A+YSSFLQR
Sbjct: 335 VAITAAMSDGTGLSEFSRRYKKRFFDVGIAEEHAVTFAAGLAAGGLKPVFAVYSSFLQRA 394
Query: 252 FDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
+DQ+ HDV LQ LPV FA+DRAG+VG DG TH G FD +F++ +PNM ++
Sbjct: 395 YDQLIHDVALQNLPVVFAVDRAGIVGNDGETHQGIFDLSFLSSIPNMTII 444
>gi|334131671|ref|ZP_08505433.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methyloversatilis
universalis FAM5]
gi|333443144|gb|EGK71109.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methyloversatilis
universalis FAM5]
Length = 618
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 189/371 (50%), Gaps = 86/371 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMAV LG+
Sbjct: 91 MATLRQYKGVSGFPRRCESEYDTFGTAHSSTSISAAL----------GMAVAAKALGQRR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
H I+VI +GA A M++EA+NNAGV LNK L RL S
Sbjct: 141 HSIAVIGDGAMTAGMAFEALNNAGVEDADLLVILNDNDMSISPPVGALNKYLTRLLSG-- 198
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
Q A + K + + E + E G + FE+ G +Y GP+DGH+L+
Sbjct: 199 --QTYNAARRAGAKVLELAPSLREFAKRAEEHVKGMITPGTLFEEFGFHYYGPIDGHDLD 256
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAML-----PL---------------------K 183
L L+ ++ +P P +HVIT+K P+ K
Sbjct: 257 ALIPTLENLRELPGPK--FLHVITKKGYGYKLAEADPILYHGVGKFDHVAGIQTGKGGGK 314
Query: 184 LQQTRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F L M G+G+ F + +P R FDVGIAEQHA+TFAA
Sbjct: 315 LTYTQVFGDWLCDMAARCDKLMAVTPAMREGSGMVRFAEEYPKRYFDVGIAEQHALTFAA 374
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG+KP AIYS+FLQR +DQ+ HDV LQ LPV A+DRAGLVGADG TH GAFD +
Sbjct: 375 GMACEGVKPVVAIYSTFLQRAYDQLIHDVCLQNLPVMMALDRAGLVGADGATHHGAFDLS 434
Query: 291 FMACLPNMVVM 301
++ CLPN+VVM
Sbjct: 435 YLLCLPNIVVM 445
>gi|398803632|ref|ZP_10562650.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas sp. CF318]
gi|398095885|gb|EJL86216.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas sp. CF318]
Length = 635
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 196/371 (52%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ GL E+ +D FG HSSTSISA L GMA+ G++
Sbjct: 89 MGSLRQFGGLSGFPRRDESEYDTFGTAHSSTSISAAL----------GMALAAQQKGEDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN--KALKRLHSNPQ------------FRQLCQEA 99
H +++I +GA A M++EA+NNAGV + K L L+ N QL
Sbjct: 139 HAVAIIGDGAMSAGMAFEALNNAGVHDHCKLLVVLNDNDMSISPPVGALNRYLAQLMSGR 198
Query: 100 FSSKDKKQKFGGQMHEIDA----FSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLED 150
F + K G Q+ + ++ +EA ++ A FE+ G YIGP+DGH+LE
Sbjct: 199 FYASAKH--VGKQVLRVAPPLLELAKRLEAHAKGMVVPATLFENFGFNYIGPIDGHDLES 256
Query: 151 LAYVLKQVKAIPDP--GAVLIHVITEK--------------------------EKAMLPL 182
L L+ +K + D G +HV+T+K +K+ P
Sbjct: 257 LVPTLENIKHLMDNNGGPQFLHVVTKKGQGYKLAEADPIAYHGPGKFDPAMGLQKSSAPA 316
Query: 183 KLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
K T++F + L D R+ G G+G+ F K FP R DVGIAEQHAVTFA
Sbjct: 317 KQTFTQVFGQWLCDMAEHDARLVGITPAMREGSGMVEFHKRFPGRYHDVGIAEQHAVTFA 376
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AG+A EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+D
Sbjct: 377 AGMACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDI 436
Query: 290 TFMACLPNMVV 300
++ C+PNM V
Sbjct: 437 PYLRCIPNMSV 447
>gi|317492933|ref|ZP_07951357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316919055|gb|EFV40390.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 621
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/365 (39%), Positives = 192/365 (52%), Gaps = 78/365 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TIRQ GL E+ +D VGHSSTSISAGL GMAV + GKN
Sbjct: 97 TIRQKGGLHPFPWRDESEYDVLSVGHSSTSISAGL----------GMAVAAEREGKNRRT 146
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQ-EAFS 101
+ VI +GA A M++EA+N+AG VLN + N QL + +S
Sbjct: 147 VCVIGDGAITAGMAFEAMNHAGDIKADMLVVLNDNEMSISENVGALNNHLAQLLSGKLYS 206
Query: 102 S-KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAYVL 155
S ++ +K + I + E + FE+LG YIGPVDGH+++ LA L
Sbjct: 207 SLREGGKKVLSGLPPIKELVKRTEEHLKGMVVPGTLFEELGFNYIGPVDGHDVQALAATL 266
Query: 156 KQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------------------TRL 189
K ++ + P L+H++T+K K P + +++
Sbjct: 267 KNMRDLKGPQ--LLHIMTKKGKGYAPAEKDPISWHAVPKFDPASGTLPKSSGGLPTYSKI 324
Query: 190 FCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEG 236
F L DN+ M G+G+ F K +P + FDV IAEQHAVTFAAGLA G
Sbjct: 325 FGDWLCETALDDNKLMAVTPAMREGSGMVRFSKEYPQQYFDVAIAEQHAVTFAAGLAIGG 384
Query: 237 LKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLP 296
KP AIYS+FLQR +DQV HDV +QKLPV FAIDRAG+VGADG TH GAFD +F+ C+P
Sbjct: 385 YKPVVAIYSTFLQRAYDQVIHDVAMQKLPVMFAIDRAGIVGADGQTHQGAFDISFLRCIP 444
Query: 297 NMVVM 301
N+V+M
Sbjct: 445 NLVIM 449
>gi|170755138|ref|YP_001781432.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum B1
str. Okra]
gi|169120350|gb|ACA44186.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum B1
str. Okra]
Length = 622
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 194/368 (52%), Gaps = 80/368 (21%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
T+RQ GL E+ +D F GHSSTSISA L GMA RD+ G+NN
Sbjct: 92 NTLRQYGGLSGFPKICESPYDVFETGHSSTSISAAL----------GMARARDIKGENNK 141
Query: 55 VISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQF 92
VI+VI +GA M+ EA+N N G ++ L ++ +P +
Sbjct: 142 VIAVIGDGALTGGMALEALNDLGFNKTDLIIILNDNQMSIAENVGGMSSYLSKVRLDPTY 201
Query: 93 RQLCQEAFSSKDKKQKFG-GQMHEIDAFSREIEAG-SRACFFEDLGLYYIGPVDGHNLED 150
+L +E ++ +K G G ++ I+ FE+LG+ Y+GP+DGH++++
Sbjct: 202 NKLKKEVNNTLNKIPNVGKGMARSLEKVKNGIKQMIVPGMLFENLGIKYLGPIDGHDIKE 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAML-----PLK-------------------LQQ 186
L+ V+K K I P VLIH IT+K K P K L
Sbjct: 262 LSKVMKMAKNINGP--VLIHTITKKGKGYAYAEKKPDKFHGIGPFDCDSGEVNSKTCLTY 319
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+++F + L D + M GTGL F + FP R FDVGIAEQHAVT AAG+A
Sbjct: 320 SKVFGEELTKIAKEDKKVVAITAAMKDGTGLRKFGETFPKRFFDVGIAEQHAVTLAAGIA 379
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
EGLKP A+YS+FLQR +DQ+ HD+ +Q LPV IDRAG+VG+DG TH G FD ++++
Sbjct: 380 TEGLKPVFAVYSTFLQRAYDQILHDICIQNLPVVLGIDRAGIVGSDGETHQGIFDLSYLS 439
Query: 294 CLPNMVVM 301
LPNM ++
Sbjct: 440 SLPNMTII 447
>gi|419796606|ref|ZP_14322138.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria sicca VK64]
gi|385699343|gb|EIG29648.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria sicca VK64]
Length = 637
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/385 (38%), Positives = 193/385 (50%), Gaps = 97/385 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R+ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRRYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN----PQFRQ------- 94
+++I +GA A ++EA+N AG +LN + N P++
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 95 ---LCQEAFSSKDKKQKFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
L S K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 RGVLSTIKAQSSKVLDKLPGAMELAQKVEHKIKTLAGEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E L VLK ++ P L+HVIT+K
Sbjct: 261 DGHNVEHLVDVLKDLRGRKGPQ--LLHVITKKGNGYKLAENDPVKYHAVANLPKDVSDDL 318
Query: 176 ------EKAMLPL-KLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRC 215
EK P K T++F K L D+R+ G+GL F++ FP R
Sbjct: 319 KTATSSEKENKPAAKPTYTQVFGKWLCDQAAADSRLAAITPAMREGSGLVEFEQQFPDRY 378
Query: 216 FDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGL 275
FDVGIAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+
Sbjct: 379 FDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGI 438
Query: 276 VGADGPTHCGAFDTTFMACLPNMVV 300
VGADGPTH G +D +F+ C+PNM++
Sbjct: 439 VGADGPTHAGLYDLSFLRCVPNMII 463
>gi|227873688|ref|ZP_03991922.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oribacterium sinus F0268]
gi|227840477|gb|EEJ50873.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oribacterium sinus F0268]
Length = 623
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/353 (39%), Positives = 184/353 (52%), Gaps = 74/353 (20%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D F GHSSTSISA L G+A RD+LG V++VI +GA M+Y
Sbjct: 104 ESPYDCFNTGHSSTSISAAL----------GIAQARDILGGKETVVAVIGDGALTGGMAY 153
Query: 71 EAINNAG--------VLNKALKRLHSNPQFRQLCQEAFSSKDK----KQKFGGQMHEIDA 118
EA+NNA +LN + N S + K+ F + +
Sbjct: 154 EALNNASKMKKNFIIILNDNEMSIAKNVGGISTYLNGIRSHENYTHFKENFAAGLSRVPI 213
Query: 119 FSREI------------EAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGA 166
+ + R FFE++G+ Y+GPVDGH+++ L VL++ K + A
Sbjct: 214 LGPSLVDRLKNTKNSIKQLFVRGMFFENMGITYLGPVDGHDIKALETVLQEAKRVDH--A 271
Query: 167 VLIHVITEKEKAMLPLK-------------------------LQQTRLFCKIL-----DN 196
VLIHV+T+K K +P + L T++F + + N
Sbjct: 272 VLIHVVTKKGKGYVPAEQSPSHYHGVSPFHLSTGKDKAESTGLSYTKIFSQTMVEEGRKN 331
Query: 197 R--------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 248
R M GTGL+ F+K FP R FDVGIAE H VT AAG+A+ GLKP A+YSSFL
Sbjct: 332 RNIVAITAAMPDGTGLDAFEKAFPRRFFDVGIAEAHGVTSAAGMASMGLKPVMAVYSSFL 391
Query: 249 QRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
QR FDQ+ HDV LQKLPV FA+DRAGLVGADG TH G FD +++ +PNM VM
Sbjct: 392 QRGFDQLVHDVCLQKLPVVFAVDRAGLVGADGETHQGIFDLSYLRLMPNMTVM 444
>gi|375111204|ref|ZP_09757415.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alishewanella jeotgali
KCTC 22429]
gi|374568746|gb|EHR39918.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alishewanella jeotgali
KCTC 22429]
Length = 619
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/367 (39%), Positives = 193/367 (52%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D VGHSSTSISA L GMA+
Sbjct: 95 MHTIRQKDGLHPFPFREESEYDVLSVGHSSTSISAAL----------GMAIAARQAKSQR 144
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF 100
V++VI +GA A M++EA+N+AG +LN + N F ++ +F
Sbjct: 145 KVVAVIGDGAITAGMAFEALNHAGEVKPDMLVILNDNEMSISENVGALNQYFARILSGSF 204
Query: 101 SSKDK---KQKFGGQ--MHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLEDLAY 153
+ + K+ G +HE+ + + E G + FFE+LG YIGP+DGH++ L
Sbjct: 205 YTSLREGGKKILSGMPPLHELASRAEEHFKGMVTPGTFFEELGFNYIGPIDGHDVLGLVD 264
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLPL-----------KLQQTR-----------LFC 191
++ ++A+ P L+H++T+K K P K T+ F
Sbjct: 265 TIRNMRALKGPQ--LLHIVTKKGKGYAPAEADPIGYHAVSKFDPTQHKQPDKKVGKPTFS 322
Query: 192 KIL----------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
I D R+ G G+ L F K FP R FDV IAEQHAVT AAGLA
Sbjct: 323 NIFGQWICDMAEQDERLQGITPAMREGSDLVAFSKRFPKRYFDVAIAEQHAVTLAAGLAI 382
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EGLKP AIYSSFLQR +DQ+ HDV LQ+L V FAIDRAG+VGADGPTH GAFD +FM C
Sbjct: 383 EGLKPVVAIYSSFLQRGYDQLIHDVALQQLDVLFAIDRAGIVGADGPTHQGAFDISFMRC 442
Query: 295 LPNMVVM 301
+PN+V+M
Sbjct: 443 IPNLVIM 449
>gi|148379842|ref|YP_001254383.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum A
str. ATCC 3502]
gi|153931662|ref|YP_001384140.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum A
str. ATCC 19397]
gi|153937476|ref|YP_001387680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum A
str. Hall]
gi|168180469|ref|ZP_02615133.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum NCTC
2916]
gi|148289326|emb|CAL83422.1| 1-deoxy-D-xylulose 5-phosphate synthase [Clostridium botulinum A
str. ATCC 3502]
gi|152927706|gb|ABS33206.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum A
str. ATCC 19397]
gi|152933390|gb|ABS38889.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum A
str. Hall]
gi|182668668|gb|EDT80646.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum NCTC
2916]
Length = 622
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 197/372 (52%), Gaps = 88/372 (23%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
T+RQ GL E+ +D F GHSSTSISA L GMA RD+ G+NN
Sbjct: 92 NTLRQYGGLSGFPKICESPYDVFETGHSSTSISAAL----------GMARARDIKGENNK 141
Query: 55 VISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQF 92
VI+VI +GA M+ EA+N N G ++ L ++ +P +
Sbjct: 142 VIAVIGDGALTGGMALEALNDLGFNKTDLIIILNDNQMSIAENVGGMSSYLSKVRLDPTY 201
Query: 93 RQLCQEAFSSKDKKQKFGGQMHEIDAFSRE-IEAGSR-----ACFFEDLGLYYIGPVDGH 146
+L +E ++ +K G M A S E ++ G + FE+LG+ Y+GP+DGH
Sbjct: 202 NKLKKEVNNTLNKIPNVGKGM----ARSLERVKNGIKQMIVPGMLFENLGIKYLGPIDGH 257
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML-----PLK------------------ 183
++++L+ V+K K I P VLIH IT+K K P K
Sbjct: 258 DIKELSKVMKMAKNINGP--VLIHTITKKGKGYAYAEKKPDKFHGIGPFDCDSGEVNSKT 315
Query: 184 -LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
L +++F + L D + M GTGL F + FP R FDVGIAEQHAVT A
Sbjct: 316 CLTYSKVFGEELTKIAKEDKKVVAITAAMKDGTGLRKFGETFPKRFFDVGIAEQHAVTLA 375
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AG+A EGLKP A+YS+FLQR +DQ+ HD+ +Q LPV IDRAG+VG+DG TH G FD
Sbjct: 376 AGIATEGLKPVFAVYSTFLQRAYDQILHDICIQNLPVVLGIDRAGIVGSDGETHQGIFDL 435
Query: 290 TFMACLPNMVVM 301
++++ LPNM ++
Sbjct: 436 SYLSSLPNMTII 447
>gi|153814705|ref|ZP_01967373.1| hypothetical protein RUMTOR_00920 [Ruminococcus torques ATCC 27756]
gi|317500235|ref|ZP_07958465.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087535|ref|ZP_08336467.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium
3_1_46FAA]
gi|145847736|gb|EDK24654.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruminococcus torques ATCC
27756]
gi|316898361|gb|EFV20402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium
8_1_57FAA]
gi|330401753|gb|EGG81331.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium
3_1_46FAA]
Length = 619
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/352 (38%), Positives = 187/352 (53%), Gaps = 80/352 (22%)
Query: 15 DAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSYEAIN 74
DAF GHSSTSISAGL G R+L G+ +V+SVI +GA M++EA+N
Sbjct: 108 DAFDTGHSSTSISAGL----------GYVAARELKGEKYNVVSVIGDGAMTGGMAFEALN 157
Query: 75 NA----------------------GVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
NA G ++K L L + + L + +D +K G
Sbjct: 158 NASRLKSNFIIVLNDNNMSISENVGGVSKYLGCLRTAQAYTDLKK---GVEDTLKKIPGT 214
Query: 113 MHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAV 167
I + ++ ++G + FFED+ + Y+GPVDGH+++++ V + K + AV
Sbjct: 215 GDRIVSRLKKTKSGIKQLFVPGMFFEDMDITYLGPVDGHDVKEMVRVFNEAKRVDH--AV 272
Query: 168 LIHVITEKEKAMLPLKLQQ-------------------------TRLFCKIL------DN 196
L+HV+T+K K LP + T +F K+L D
Sbjct: 273 LVHVLTKKGKGYLPAEENPAKFHGTGPFHLETGDAKESKGADTYTEVFSKVLLDIAKKDE 332
Query: 197 R-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQ 249
R M GTGL F KHFP R FDVGIAE+HA+TFAAGLAA G+KP A+YSSFLQ
Sbjct: 333 RIVAITAAMADGTGLTPFAKHFPNRFFDVGIAEEHAMTFAAGLAAGGMKPIFAVYSSFLQ 392
Query: 250 RCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
R +DQ HDV LQ LPV A+DRAGLVG+DG TH G FD +F++ +PNM ++
Sbjct: 393 RAYDQTLHDVCLQNLPVVIAVDRAGLVGSDGETHQGVFDLSFLSMIPNMTII 444
>gi|312127650|ref|YP_003992524.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor
hydrothermalis 108]
gi|311777669|gb|ADQ07155.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor
hydrothermalis 108]
Length = 616
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 194/377 (51%), Gaps = 89/377 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+R+ GL E+++D+F GHSSTSIS L G AV RDL ++ V
Sbjct: 90 TLRKFSGLSGFPKSKESIYDSFDTGHSSTSISVAL----------GFAVARDLKNEDYDV 139
Query: 56 ISVIVEGATIARMSYEAINNAGVLN----------------------KALKRLHSNPQFR 93
I+VI +GA ++YE +NNAG N K L ++ + P++
Sbjct: 140 IAVIGDGALTGGLAYEGLNNAGRYNGKLLVILNDNDMSISKNVGAIAKYLSKVRTKPRYF 199
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFF-----EDLGLYYIGPVDGHNL 148
+L + A S + G + + F R+++ + FF E LG Y GP+DGH++
Sbjct: 200 KLKKAADSLVEGIPVVGKNLSK---FVRKVKGSLKYFFFPGTLFEALGFEYYGPIDGHDI 256
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAM-----LPLKLQ----------------QT 187
E L V K VK P VL+HV+T+K K P K +
Sbjct: 257 ERLCEVFKSVKDFERP--VLVHVVTQKGKGYEHAERFPEKFHGVPPFDIETGNHLSDNTS 314
Query: 188 RLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+ F ++L ++ M GTGL+ F K +P R FDVGIAE+HAVTFA
Sbjct: 315 KTFSEVLGDKLCELAKRNPKILAITAAMPDGTGLSKFAKMYPQRFFDVGIAEEHAVTFAG 374
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
LA EG KPF AIYS+FLQR FDQ+ HDV LQ L V F +DRAGLVG DG TH G+FD +
Sbjct: 375 ALAKEGFKPFVAIYSTFLQRAFDQIIHDVCLQNLNVVFCVDRAGLVGEDGETHHGSFDIS 434
Query: 291 FMACLPNMVVM--KDIK 305
+++ +PN+ +M KD K
Sbjct: 435 YLSLIPNLTLMVPKDTK 451
>gi|261364198|ref|ZP_05977081.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria mucosa ATCC
25996]
gi|288567810|gb|EFC89370.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria mucosa ATCC
25996]
Length = 637
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 148/385 (38%), Positives = 193/385 (50%), Gaps = 97/385 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R+ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRRYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN----PQFRQ------- 94
+++I +GA A ++EA+N AG +LN + N P++
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 95 ---LCQEAFSSKDKKQKFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
L S K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 RGVLSTIKAQSSKVLDKLPGAMELAQKVEHKIKTLAGEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E L VLK ++ P L+HVIT+K
Sbjct: 261 DGHNVEHLVDVLKDLRGRKGPQ--LLHVITKKGNGYKLAENDPVKYHAVANLPKDVSDDL 318
Query: 176 ------EKAMLPL-KLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRC 215
EK P K T++F K L D+R+ G+GL F++ FP R
Sbjct: 319 KTATSSEKENKPASKPTYTQVFGKWLCDQAAADSRLAAITPAMREGSGLVEFEQQFPDRY 378
Query: 216 FDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGL 275
FDVGIAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+
Sbjct: 379 FDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQRGYDQLVHDIALQNLPVLFAVDRAGI 438
Query: 276 VGADGPTHCGAFDTTFMACLPNMVV 300
VGADGPTH G +D +F+ C+PNM+V
Sbjct: 439 VGADGPTHAGLYDLSFLRCVPNMIV 463
>gi|345869245|ref|ZP_08821203.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodococcus drewsii
AZ1]
gi|343923168|gb|EGV33860.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodococcus drewsii
AZ1]
Length = 649
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/367 (39%), Positives = 193/367 (52%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +DAFGVGHSSTSISA L GMA+ G+
Sbjct: 103 MCTLRQKDGVSGFPKRCESEYDAFGVGHSSTSISAAL----------GMALAAKQKGERR 152
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLH------SNPQFRQLCQEA 99
VI+VI +GA A M++EA+N+AG +LN + SN R L +
Sbjct: 153 TVIAVIGDGALSAGMAFEALNHAGSMDIDLVVILNDNEMSISPPVGAISNHLARLLSGKL 212
Query: 100 FSS--KDKKQKFGGQ---MHEIDAFSREIEAG-SRACFFEDLGLYYIGPVDGHNLEDLAY 153
++S + K G H + + ++ + FE+LG YIGP+DGH+L +
Sbjct: 213 YTSVREGSKTALAGMPQLRHLVGRWEEHVKGMLMPSTLFEELGFNYIGPIDGHDLGSVTR 272
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQT-------------------------- 187
L+ +K +P G L+HV+T+K + P + Q T
Sbjct: 273 TLRNIKGMP--GQRLLHVVTQKGRGYEPAEGQPTTYHGVTPFDRRTGELRKGKSNGPTYT 330
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F L D R+ G G+GL F K FP R FDVGIAEQHAVT AAG+A
Sbjct: 331 QIFGGWLCDAADEDPRLVGITPAMCEGSGLTAFSKRFPDRYFDVGIAEQHAVTLAAGMAC 390
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EGLKP AIYSSFLQR +DQ+ HDV LQ L V FA+DR GLVGADG TH G+FD +F
Sbjct: 391 EGLKPVVAIYSSFLQRAYDQLIHDVALQNLDVTFAVDRGGLVGADGATHAGSFDLSFTRP 450
Query: 295 LPNMVVM 301
+PNMV+M
Sbjct: 451 IPNMVIM 457
>gi|387818089|ref|YP_005678434.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum
H04402 065]
gi|322806131|emb|CBZ03699.1| 1-deoxy-D-xylulose 5-phosphate synthase [Clostridium botulinum
H04402 065]
Length = 622
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 197/372 (52%), Gaps = 88/372 (23%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
T+RQ GL E+ +D F GHSSTSISA L GMA RD+ G+NN
Sbjct: 92 NTLRQYGGLSGFPKICESPYDVFETGHSSTSISAAL----------GMARARDIKGENNK 141
Query: 55 VISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQF 92
VI+VI +GA M+ EA+N N G ++ L ++ +P +
Sbjct: 142 VIAVIGDGALTGGMALEALNDLGFNKTDLIIILNDNQMSIAENVGGMSSYLSKVRLDPTY 201
Query: 93 RQLCQEAFSSKDKKQKFGGQMHEIDAFSRE-IEAGSR-----ACFFEDLGLYYIGPVDGH 146
+L +E ++ +K G M A S E ++ G + FE+LG+ Y+GP+DGH
Sbjct: 202 NKLKKEVNNTLNKIPNVGKGM----ARSLERVKNGIKQMIVPGMLFENLGIKYLGPIDGH 257
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML-----PLK------------------ 183
++++L+ V+K K I P VLIH IT+K K P K
Sbjct: 258 DIKELSKVMKMAKNINGP--VLIHTITKKGKGYAYAEKKPDKFHGIGPFDCDSGEVNSKT 315
Query: 184 -LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
L +++F + L D + M GTGL F + FP R FDVGIAEQHAVT A
Sbjct: 316 CLTYSKVFGEELTKIAKEDKKVVAITAAMKDGTGLRKFGETFPKRFFDVGIAEQHAVTLA 375
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AG+A EGLKP A+YS+FLQR +DQ+ HD+ +Q LPV IDRAG+VG+DG TH G FD
Sbjct: 376 AGIATEGLKPVFAVYSTFLQRAYDQILHDICIQNLPVVLGIDRAGIVGSDGETHQGIFDL 435
Query: 290 TFMACLPNMVVM 301
++++ LPNM ++
Sbjct: 436 SYLSSLPNMTII 447
>gi|333916048|ref|YP_004489780.1| 1-deoxy-D-xylulose-5-phosphate synthase [Delftia sp. Cs1-4]
gi|333746248|gb|AEF91425.1| 1-deoxy-D-xylulose-5-phosphate synthase [Delftia sp. Cs1-4]
Length = 626
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 192/364 (52%), Gaps = 78/364 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ GL E+ +D FG HSSTSISA L GMA+ G++
Sbjct: 93 MASLRQFGGLSGFPQRAESPYDTFGTAHSSTSISAAL----------GMALAAKQKGEDR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHS-------------NPQFRQLCQEAF 100
I+VI +GA A M++EA+NNAGV + L + + N QL F
Sbjct: 143 RAIAVIGDGAMTAGMAFEALNNAGVTDANLLVILNDNDMSISPPVGALNRYLAQLMSGQF 202
Query: 101 SSK--DKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAY 153
+K D + Q+ + ++ +E ++ A FE+ G YIGP+DGH+L+ L
Sbjct: 203 YAKARDMGKSVLKQVPPLLELAKRLEQQAKGMVVPATLFENFGFNYIGPIDGHDLDSLIP 262
Query: 154 VLKQVKAIPDPGAVLIHVITEKE--------------------------KAMLPLKLQQT 187
L+ +K++ P +HV+T+K K P K T
Sbjct: 263 TLENIKSLKGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPSVGLVKPATPPKQTFT 320
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F L D R+ G G+G+ F + FP R +DVGIAEQHAVTFAAG+A
Sbjct: 321 QVFGHWLCDMADKDQRLVGITPAMREGSGMVEFHRRFPGRYYDVGIAEQHAVTFAAGMAC 380
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EGLKP AIYS+FLQR +DQ+ HDV LQKLPV FA+DRAGLVGADG TH GA+D F+ C
Sbjct: 381 EGLKPVVAIYSTFLQRGYDQLIHDVALQKLPVVFALDRAGLVGADGATHAGAYDIAFVRC 440
Query: 295 LPNM 298
+P+M
Sbjct: 441 IPHM 444
>gi|421862952|ref|ZP_16294654.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379483|emb|CBX21849.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 641
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 149/385 (38%), Positives = 194/385 (50%), Gaps = 97/385 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LLG N
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGGNR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMELAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VL+ ++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLEDLRGRKGP--QLLHVITKKGNGYKLAENDPVKYHAVAKLPKDVSDGP 318
Query: 176 ------EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRC 215
EK P K T++F K L +R M G+GL F++ FP R
Sbjct: 319 KTATPSEKENKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRY 378
Query: 216 FDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGL 275
FDVGIAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ L V FA+DRAG+
Sbjct: 379 FDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLSVLFAVDRAGI 438
Query: 276 VGADGPTHCGAFDTTFMACLPNMVV 300
VGADGPTH G +D +F+ C+PNM+V
Sbjct: 439 VGADGPTHAGLYDLSFLRCIPNMIV 463
>gi|402313746|ref|ZP_10832656.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium
ICM7]
gi|400365528|gb|EJP18579.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium
ICM7]
Length = 625
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 185/356 (51%), Gaps = 80/356 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ D F GHSSTS+SAGL GMA GRD+ G+N VISVI +GA M+Y
Sbjct: 104 ESKFDVFNTGHSSTSLSAGL----------GMAFGRDIKGENYRVISVIGDGALTGGMAY 153
Query: 71 EAINNA----------------------GVLNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNA G +N L + + + L + +S +
Sbjct: 154 EALNNAAQIKKNFIMVLNDNEMSISKNVGGMNDYLNNIRTGDGYNNLKKRVVNSLEHLPY 213
Query: 109 FGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
G M ID+ R+ + G + FE++G+ Y+GPVDGHN+ L V ++ K +
Sbjct: 214 IGKPM--IDSI-RQTKNGIKQILIPGMLFENMGVTYLGPVDGHNIASLLKVFEEAKKVEG 270
Query: 164 PGAVLIHVITEKEKAMLPL-------------------------KLQQTRLFCKIL---- 194
P VL+HV+T+K K P K T +F + +
Sbjct: 271 P--VLVHVLTKKGKGYSPAENHPENFHGIGAFDIASGNAKSGSKKPTYTDVFSQKIVELA 328
Query: 195 -DNR--------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS 245
+N+ M G GL F+ FP R FDVGIAEQHA+T AAGLAA GL P +YS
Sbjct: 329 SENKDIVAITAAMPEGCGLLDFKNKFPKRFFDVGIAEQHAITSAAGLAASGLIPVVCVYS 388
Query: 246 SFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
SFLQR FDQ+ HDV LQ L V FAIDRAGLVGADG TH G FD +F++C+PNM ++
Sbjct: 389 SFLQRGFDQIVHDVCLQNLHVVFAIDRAGLVGADGETHQGIFDVSFLSCIPNMTLL 444
>gi|336439980|ref|ZP_08619580.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium
1_1_57FAA]
gi|336014565|gb|EGN44410.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium
1_1_57FAA]
Length = 567
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/352 (38%), Positives = 187/352 (53%), Gaps = 80/352 (22%)
Query: 15 DAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSYEAIN 74
DAF GHSSTSISAGL G R+L G+ +V+SVI +GA M++EA+N
Sbjct: 56 DAFDTGHSSTSISAGL----------GYVAARELKGEKYNVVSVIGDGAMTGGMAFEALN 105
Query: 75 NA----------------------GVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
NA G ++K L L + + L + +D +K G
Sbjct: 106 NASRLKSNFIIVLNDNNMSISENVGGVSKYLGCLRTAQAYTDLKK---GVEDTLKKIPGT 162
Query: 113 MHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAV 167
I + ++ ++G + FFED+ + Y+GPVDGH+++++ V + K + AV
Sbjct: 163 GDRIVSRLKKTKSGIKQLFVPGMFFEDMDITYLGPVDGHDVKEMVRVFNEAKRVDH--AV 220
Query: 168 LIHVITEKEKAMLPLKLQQ-------------------------TRLFCKIL------DN 196
L+HV+T+K K LP + T +F K+L D
Sbjct: 221 LVHVLTKKGKGYLPAEENPAKFHGTGPFHLETGDAKESKGADTYTEVFSKVLLDIAKKDE 280
Query: 197 R-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQ 249
R M GTGL F KHFP R FDVGIAE+HA+TFAAGLAA G+KP A+YSSFLQ
Sbjct: 281 RIVAITAAMADGTGLTPFAKHFPNRFFDVGIAEEHAMTFAAGLAAGGMKPIFAVYSSFLQ 340
Query: 250 RCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
R +DQ HDV LQ LPV A+DRAGLVG+DG TH G FD +F++ +PNM ++
Sbjct: 341 RAYDQTLHDVCLQNLPVVIAVDRAGLVGSDGETHQGVFDLSFLSMIPNMTII 392
>gi|71908674|ref|YP_286261.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechloromonas aromatica
RCB]
gi|118595510|sp|Q47BJ0.1|DXS_DECAR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|71848295|gb|AAZ47791.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechloromonas aromatica
RCB]
Length = 618
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 191/371 (51%), Gaps = 86/371 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R G+ E+ +D FGVGHSSTSISA L GMA+ G++
Sbjct: 91 MSTLRMHGGVSGFPKRAESPYDTFGVGHSSTSISAAL----------GMALAAKHKGEDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
I++I +GA A M++EA+NNAGV LN L RL S+
Sbjct: 141 KAIAIIGDGAMSAGMAFEAMNNAGVADADMLVILNDNEMSISPPVGALNNILTRLTSSKT 200
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
+ + +EA F + E+ + E G + FE+ G +Y GP+DGH+L+
Sbjct: 201 Y-NVAREA---GRHMLGFAPPLLELARRAEEHVKGMIAPGTLFEEFGFHYYGPIDGHDLD 256
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAMLPLK 183
L L+ +K + P +HVIT+K + A P K
Sbjct: 257 ALIPTLENLKKLKGPK--FLHVITKKGQGYKLAENDPILYHGVGKFAACDGIQSAKGPAK 314
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F L D+R+ G G+G+ F R FDVGIAEQHAVTFAA
Sbjct: 315 LTYTQVFGDWLCDMAKADSRLVGITPAMREGSGMVRFSAEHADRYFDVGIAEQHAVTFAA 374
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DR GLVGADGPTH G FD +
Sbjct: 375 GLACEGLKPVVAIYSTFLQRGYDQLVHDVALQNLPVIFAVDRGGLVGADGPTHHGTFDLS 434
Query: 291 FMACLPNMVVM 301
F+ C+PNM VM
Sbjct: 435 FVTCIPNMTVM 445
>gi|350546104|ref|ZP_08915528.1| 1-deoxy-D-xylulose 5-phosphate synthase [Candidatus Burkholderia
kirkii UZHbot1]
gi|350526130|emb|CCD41296.1| 1-deoxy-D-xylulose 5-phosphate synthase [Candidatus Burkholderia
kirkii UZHbot1]
Length = 638
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 196/375 (52%), Gaps = 93/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +RQ G+ E+ +D FG HSSTSISA L GMA+ L N
Sbjct: 89 MPGLRQLGGISGFPRRSESEYDTFGTAHSSTSISAAL----------GMAIANKLQSDNR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
+ I+VI +GA A M++EA+NNAGV L++ L RL S
Sbjct: 139 YSIAVIGDGAMTAGMAFEAMNNAGVADDLPLLVILNDNDMSISPPVGALHRHLARLMSG- 197
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ A + ++ + M ++ +R++E ++ A FE+ G YIGP+DG
Sbjct: 198 ---RFYAAARAGVERVLRAAPPMLDL---ARKLEEHAKGMIVPATLFEEFGFNYIGPIDG 251
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + G +HV+T+K + +
Sbjct: 252 HDLDSLIPTLQNIKEL--RGLQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPST 309
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D+R+ G G+G+ F+K FP R FDVGIAEQHAV
Sbjct: 310 APSKKTYTQVFGEWLCDAAAQDSRVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAV 369
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFA GLAA+G+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADG TH G
Sbjct: 370 TFAGGLAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGN 429
Query: 287 FDTTFMACLPNMVVM 301
+D F+ C+PNM V+
Sbjct: 430 YDLAFLRCIPNMTVI 444
>gi|150390271|ref|YP_001320320.1| deoxyxylulose-5-phosphate synthase [Alkaliphilus metalliredigens
QYMF]
gi|149950133|gb|ABR48661.1| deoxyxylulose-5-phosphate synthase [Alkaliphilus metalliredigens
QYMF]
Length = 636
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 186/377 (49%), Gaps = 95/377 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+T+RQ GL E+ HD F GHSSTSISA L G+A RDL + +
Sbjct: 92 FKTLRQYKGLSGFPKRHESSHDHFDTGHSSTSISAAL----------GLASARDLKKEKH 141
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
V++VI +GA M++EA+N N G L+ L ++ + P
Sbjct: 142 EVVAVIGDGALTGGMAFEALNHGGQSKKNITVVLNDNEMSISQNVGGLSNYLSKIRTAPI 201
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR---------ACFFEDLGLYYIGP 142
+ ++ KD + G + I ++ ++ FE+LG YIGP
Sbjct: 202 YAKV-------KDDLELLLGNIPAIGKSVKKTAEKAKDSIKYFFVPGILFEELGFTYIGP 254
Query: 143 VDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML---------------------P 181
+DGH+ L +K K I P LIHVIT+K K P
Sbjct: 255 IDGHDYNALCTAIKNSKNIKGPK--LIHVITKKGKGYKLAEKSPAEFHGVSPFKIETGKP 312
Query: 182 LKLQQTRLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQH 224
+ L + F ++ N M GTGL F + FP R FDVGIAEQH
Sbjct: 313 ISLTKNLSFSEVAGNTLIEAAKTNPRIVTITAAMPSGTGLADFAEQFPERFFDVGIAEQH 372
Query: 225 AVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHC 284
AVTFAAG+AAEG KPF A+YS+FLQR FDQV HDV +Q LPV F IDRAGLVG DG TH
Sbjct: 373 AVTFAAGMAAEGYKPFFAVYSTFLQRAFDQVIHDVCIQNLPVTFLIDRAGLVGNDGETHH 432
Query: 285 GAFDTTFMACLPNMVVM 301
G FD +F++C+PN+ ++
Sbjct: 433 GVFDISFLSCIPNLTIL 449
>gi|114776788|ref|ZP_01451831.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mariprofundus ferrooxydans
PV-1]
gi|114552874|gb|EAU55305.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mariprofundus ferrooxydans
PV-1]
Length = 620
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 184/367 (50%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M IRQ GL E+ HD FG GH+STSISA GMAVGRDL +++
Sbjct: 90 MPGIRQYGGLCGFTKRAESDHDPFGAGHASTSISAAY----------GMAVGRDLSHQDH 139
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF-------------------RQ 94
V++VI +GA M++EA+N+AG N L + ++ + R
Sbjct: 140 QVVAVIGDGALTGGMAFEAMNHAGGNNNKLLVILNDNEMSIAPNVGAMSSYLARIISGRS 199
Query: 95 LCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG-SRACFFEDLGLYYIGPVDGHNLEDLAY 153
Q ++K +K G + ++ + FE++G YIGPVDGH+ + L
Sbjct: 200 YTQAKDTAKRILEKLPGALDAAKRVEEHVKGMITPGTLFEEMGFRYIGPVDGHDFDHLLP 259
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------------------LQQT 187
L+ + P L+HV+T K P + T
Sbjct: 260 TLQNCSRLNGP--TLLHVVTRKGLGFSPAEEDPETWHGLGPYDVKTGEPFKSSGQAASYT 317
Query: 188 RLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F +L D+R M GGTGL F P RCFDVGIAEQHAVTFA GLAA
Sbjct: 318 QVFADMLADMADADDRVVAITAAMPGGTGLTRFAARHPDRCFDVGIAEQHAVTFAGGLAA 377
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
G +P+ AIYS+F+QR +DQ+ HD+ +Q LPV F +DRAG+VGADG TH G FD FM
Sbjct: 378 SGKRPYVAIYSTFMQRAYDQIIHDICIQNLPVTFCLDRAGIVGADGATHTGMFDLAFMRN 437
Query: 295 LPNMVVM 301
LPNM VM
Sbjct: 438 LPNMTVM 444
>gi|389722021|ref|ZP_10188718.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodanobacter sp. 115]
gi|388444650|gb|EIM00748.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodanobacter sp. 115]
Length = 630
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 188/374 (50%), Gaps = 92/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+ TI++ GL E+ +D FGVGHSSTSISA L GMA+ G
Sbjct: 94 ITTIKKKDGLAPFPRREESEYDTFGVGHSSTSISAAL----------GMAIAAQRKGDKR 143
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
V++VI +GA A M++EA+N N G + K + R ++ +
Sbjct: 144 KVVAVIGDGAITAGMAFEALNHGGDVEPDMLVVFNDNGMSISENVGAMTKMMARAMASRR 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+ + A + KQ F G+ F + E ++ F FE+LG +Y GP+DGH
Sbjct: 204 LNAVRERAKRAI-PKQSFAGR------FFKRWEEHAKGMFVPSTLFEELGFHYTGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------- 186
N+ L L+ VK++P P L+HV+T K K P + Q
Sbjct: 257 NIPQLLTALRTVKSLPGP--QLLHVVTTKGKGYAPAEQAQIEYHAVGPFDPDAGVVKKPK 314
Query: 187 ------TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T +F L D + G G+GL F K +P R FDV IAEQHAVT
Sbjct: 315 PAKPTYTDIFGDWLCDMAAADEHLLGITPAMREGSGLVRFSKEYPERYFDVAIAEQHAVT 374
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
AAG+A EG KP AIYS+FLQR +DQ HDV LQ L V FAIDRAG+VG DG TH G+F
Sbjct: 375 LAAGMACEGAKPVVAIYSTFLQRAYDQAIHDVALQNLDVTFAIDRAGVVGPDGATHSGSF 434
Query: 288 DTTFMACLPNMVVM 301
D +F+ CLPNMV+M
Sbjct: 435 DLSFLRCLPNMVIM 448
>gi|394988075|ref|ZP_10380913.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfuricella denitrificans
skB26]
gi|393792533|dbj|GAB70552.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfuricella denitrificans
skB26]
Length = 623
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/367 (37%), Positives = 192/367 (52%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +DAFG GHSSTSISA L GMAV G +
Sbjct: 92 MATLRQLGGIAGFPKRAESEYDAFGAGHSSTSISAAL----------GMAVAAQAEGSDR 141
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHS-------------NPQFRQLCQEAF 100
+++I +GA M++EA+NNAG ++ L + + N +L F
Sbjct: 142 RAVAIIGDGAMTGGMAFEALNNAGAMDANLLVVLNDNDMSISENVGALNNYLAKLMSGRF 201
Query: 101 SSKDKK--QKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
S +K +K G + I ++ E + FE+ G YIGP+DGH+L+ L
Sbjct: 202 YSAMRKGGEKVLGAVPPILELAKRAEEHMKGMVIPGTLFEEFGFNYIGPIDGHDLDVLVT 261
Query: 154 VLKQVKAIPDPGAVLIHVITEKEK--------------------------AMLPLKLQQT 187
L +K + P L+H+ T+K K A KL T
Sbjct: 262 TLSNLKHLQGP--QLLHIATQKGKGYKLAEEDPCLYHGVAKFNPEDGVSDAKPGGKLTYT 319
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F L D R+ G G+G+ F + +P R FDVGIAEQHA+TFAAG+A
Sbjct: 320 QVFGDWLCDMAAQDKRLVGITPAMCEGSGMVRFAREYPKRYFDVGIAEQHALTFAAGIAC 379
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EG+KP AIYS+FLQR +DQ+ HD+ LQ LP+ AIDRAGLVGADGPTH G+FD +F+ C
Sbjct: 380 EGMKPVVAIYSTFLQRAYDQLIHDIALQGLPIVLAIDRAGLVGADGPTHAGSFDLSFLRC 439
Query: 295 LPNMVVM 301
+PN++VM
Sbjct: 440 VPNLLVM 446
>gi|298370555|ref|ZP_06981870.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria sp. oral taxon
014 str. F0314]
gi|298281165|gb|EFI22655.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria sp. oral taxon
014 str. F0314]
Length = 639
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/385 (38%), Positives = 192/385 (49%), Gaps = 97/385 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R+ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRRYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN----PQFRQ------- 94
+++I +GA A ++EA+N AG +LN + N P++
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 95 ---LCQEAFSSKDKKQKFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
L S K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 RGVLSTIKAQSSKVLDKLPGAMELAQKVEHKIKTLAGEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E L VLK + P L+HVIT+K
Sbjct: 261 DGHNVEHLVDVLKDLHGRKGPQ--LLHVITKKGNGYKLAENDPVKYHAVANLPKDVSDDL 318
Query: 176 ------EKAMLPL-KLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRC 215
EK P K T++F K L D+R+ G+GL F++ FP R
Sbjct: 319 KTATSSEKENKPAAKPTYTQVFGKWLCDQAAADSRLAAITPAMREGSGLVEFEQQFPDRY 378
Query: 216 FDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGL 275
FDVGIAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+
Sbjct: 379 FDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGI 438
Query: 276 VGADGPTHCGAFDTTFMACLPNMVV 300
VGADGPTH G +D +F+ C+PNM+V
Sbjct: 439 VGADGPTHAGLYDLSFLRCVPNMIV 463
>gi|33151663|ref|NP_873016.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus ducreyi
35000HP]
gi|41016951|sp|Q7VNP7.1|DXS_HAEDU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|33147884|gb|AAP95405.1| 1-deoxyxylulose-5-phosphate synthase [Haemophilus ducreyi 35000HP]
Length = 617
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 182/368 (49%), Gaps = 79/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ G+ E+ +D VGHSSTSISAGL G+AV
Sbjct: 92 MHTIRQKNGIHPFPWREESPYDVLSVGHSSTSISAGL----------GIAVAAQKENAGR 141
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
+ VI +GA A M++EA+N N G LN L R+ S
Sbjct: 142 KTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSISENVGALNNHLARIFSGSL 201
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDL 151
+ + + DK M + + + + + FE+LG YIGP+DGHN+E+L
Sbjct: 202 YTSMRDGSKKVLDKVPTIKNFMKKSEEHMKGVIFSPDSTLFEELGFNYIGPIDGHNIEEL 261
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAMLPL------------------KLQQTRL---- 189
L ++ + P +HV T+K K P KL Q+++
Sbjct: 262 VKTLTNMRELKGPQ--FLHVRTKKGKGYEPAENDPISYHGVPRFDPASGKLPQSKIVPTY 319
Query: 190 -------FCKILDNR---------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
C++ +N M G+G+ F K FP + FDV IAEQHAVTFAAGLA
Sbjct: 320 SDIFGNWLCEMAENDEKIIGITPAMREGSGMVEFSKRFPTQYFDVAIAEQHAVTFAAGLA 379
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
G KP AIYS+FLQR +DQ+ HD+ +Q LPV FAIDRAG+VGADG TH GAFD +FM
Sbjct: 380 IAGYKPVVAIYSTFLQRAYDQLIHDIAIQNLPVIFAIDRAGVVGADGQTHQGAFDLSFMR 439
Query: 294 CLPNMVVM 301
C+PNM +M
Sbjct: 440 CIPNMTIM 447
>gi|222055718|ref|YP_002538080.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter daltonii FRC-32]
gi|221565007|gb|ACM20979.1| deoxyxylulose-5-phosphate synthase [Geobacter daltonii FRC-32]
Length = 624
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 189/371 (50%), Gaps = 86/371 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+R+ G+ E+ HDAF VGHSSTSISA L GMA+ RDL + N V
Sbjct: 91 TLRRLGGISGFPKRCESPHDAFDVGHSSTSISAAL----------GMALARDLKREKNKV 140
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEAFS 101
++VI +G+ ++YE +N+AG LN+ + + ++ + R + E F
Sbjct: 141 LAVIGDGSMTGGLAYEGLNHAGHLNRDMVVILNDNEMSISENVGALSSFLSRTITSE-FV 199
Query: 102 SKDKKQKFGGQMHEIDAFSREI-EAGSRA-----------CFFEDLGLYYIGPVDGHNLE 149
K KK G + +D R + + RA FE G Y+GP+DGHN+E
Sbjct: 200 HKIKKD-VEGFLENMDGLGRGVLQVAKRAEESLKGLFTPGMLFEAFGFEYVGPIDGHNIE 258
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------------------- 186
L L+ VK D AVLIHV+T K K P +
Sbjct: 259 LLMQTLENVKRFDD--AVLIHVLTRKGKGYGPAETNPSLFHGVGPFDVTSGKVAKGKGGA 316
Query: 187 ---TRLFCKIL-----DNR--------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T LF + L DN M GTGL+ F P R FDVGIAEQH VTFAA
Sbjct: 317 ASYTFLFGEALNKIANDNEKVVAITAAMPDGTGLSAFAAKHPDRFFDVGIAEQHGVTFAA 376
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA GLKP A+YSSFLQR +DQ+ HDV LQ LPV FAIDRAG+VG+DGPTH G FD +
Sbjct: 377 GLAGRGLKPVFAVYSSFLQRAYDQIFHDVCLQNLPVVFAIDRAGVVGSDGPTHHGVFDLS 436
Query: 291 FMACLPNMVVM 301
++ P M +M
Sbjct: 437 YLRSFPQMTLM 447
>gi|88859184|ref|ZP_01133825.1| 1-deoxy-D-xylulose 5-phosphate synthase (DXP synthase)
[Pseudoalteromonas tunicata D2]
gi|88819410|gb|EAR29224.1| 1-deoxy-D-xylulose 5-phosphate synthase (DXP synthase)
[Pseudoalteromonas tunicata D2]
Length = 620
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 185/374 (49%), Gaps = 92/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D F VGHSSTSISA L GMA+ KN
Sbjct: 95 MHTIRQKNGLHPFPYREESQYDTFSVGHSSTSISAAL----------GMAIAAKKEAKNR 144
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
V++VI +GA A M++EA+N N G LN L R+ S
Sbjct: 145 KVVAVIGDGAVTAGMAFEAMNHAGDLDADMLVILNDNEMSISENVGALNNHLARILSGSF 204
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGH 146
+ + ++ +K M + + ++E + FFE+LG YIGP+DGH
Sbjct: 205 YTNI-------REGGKKLLSGMPPVKELASKMEEHLKGMVVPGTFFEELGFNYIGPIDGH 257
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEK----------------------AMLPLKL 184
++ L L+ ++ + P L+HV T+K K + LP
Sbjct: 258 DVNMLCDTLRNMRNLKGPQ--LLHVRTQKGKGYQPAEADPIGYHGVPKFDPSESSLPKSK 315
Query: 185 QQTRLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
F K+ + M G+G+ F K +P + FDV IAEQHAVT
Sbjct: 316 PAAPTFSKVFGDWLCDMAAQDSKLMAITPAMREGSGMVRFSKEYPAQYFDVAIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
AAGLA EGL P AIYSSFLQR +DQ+ HDV LQ LPV FAIDRAG+VGADG TH GA+
Sbjct: 376 LAAGLACEGLNPVVAIYSSFLQRAYDQLIHDVALQNLPVLFAIDRAGIVGADGETHQGAY 435
Query: 288 DTTFMACLPNMVVM 301
D +FM C+PNMV+M
Sbjct: 436 DLSFMRCIPNMVIM 449
>gi|427402584|ref|ZP_18893581.1| 1-deoxy-D-xylulose-5-phosphate synthase [Massilia timonae CCUG
45783]
gi|425718390|gb|EKU81337.1| 1-deoxy-D-xylulose-5-phosphate synthase [Massilia timonae CCUG
45783]
Length = 624
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 190/375 (50%), Gaps = 95/375 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +D FG HSSTSISA L GMA + G++
Sbjct: 88 MPTLRQLNGLSGFPKRDESEYDTFGTAHSSTSISAAL----------GMATAARIKGEDR 137
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
H I+VI +G+ A M++EA+NNAGV LN+ L RL S
Sbjct: 138 HAIAVIGDGSMTAGMAFEALNNAGVEDDVNLLVILNDNDMSISPPVGALNRYLARLLSG- 196
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF + S + +R++E ++ A FE+ G YIGP+DG
Sbjct: 197 QFYAAAKNVGKSVLPA--------PVLDLARKLEEHAKGMVVPATMFEEFGFNYIGPIDG 248
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ +K + P +HV+T+K + +
Sbjct: 249 HDLDSLIPTLENIKKLKGP--QFLHVVTKKGQGYKLAEAEPILYHGTGKFNHLEGIKPST 306
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K+ T +F L D R+ G G+G+ F + +P R FDVGIAEQH+V
Sbjct: 307 APGKITYTEVFGNWLCDMAAADKRLVGITPAMREGSGMVRFHQEYPQRYFDVGIAEQHSV 366
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TF AG+A EGLKP AIYS+FLQR +DQ+ HDV LQ L V FA+DRAGLVGADG TH G
Sbjct: 367 TFGAGIATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGN 426
Query: 287 FDTTFMACLPNMVVM 301
+D ++ C+PNMVVM
Sbjct: 427 YDLAYLRCIPNMVVM 441
>gi|74316897|ref|YP_314637.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiobacillus denitrificans
ATCC 25259]
gi|118595629|sp|Q3SKF1.1|DXS_THIDA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|74056392|gb|AAZ96832.1| deoxyxylulose-5-phosphate synthase [Thiobacillus denitrificans ATCC
25259]
Length = 618
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 186/369 (50%), Gaps = 85/369 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+ +RQ G+ E+ DAFG GHSSTSISA L GMA LG +
Sbjct: 90 MQGLRQRGGIAGFPRRAESEFDAFGTGHSSTSISAAL----------GMAEAFHQLGSDQ 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
++VI +GA A M++EA+NNAG LN L RL S
Sbjct: 140 RAVAVIGDGAMTAGMAFEALNNAGATELPLLVVLNDNDMSISPNVGALNNYLARLMSG-- 197
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
+ A + DK + E+ + E G + FE+ G YIGP+DGH+L+
Sbjct: 198 --RFYAAARRAGDKVLSVAPPIRELAKRAEEHMKGMVTPGTLFEEFGFNYIGPIDGHDLD 255
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPL-------------------------KL 184
L L+ ++ + P +HV+T K K P K
Sbjct: 256 VLVNTLRNIRHLRGP--QFLHVVTRKGKGYTPAETNPCLYHGVARFDPAAGVAEKRAGKP 313
Query: 185 QQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F L D R+ G G+GL F + FP R FDVGIAEQHA+TFAAG
Sbjct: 314 SYTEVFGDWLCDMAASDPRLVGITPAMREGSGLVRFSQEFPERYFDVGIAEQHALTFAAG 373
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV AIDRAGLVGADGPTH G+FD +F
Sbjct: 374 LACEGVKPVVAIYSTFLQRAYDQLIHDIALQNLPVTLAIDRAGLVGADGPTHAGSFDLSF 433
Query: 292 MACLPNMVV 300
+ C+P++V+
Sbjct: 434 LRCVPDLVI 442
>gi|121604407|ref|YP_981736.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas
naphthalenivorans CJ2]
gi|166198636|sp|A1VMD7.1|DXS_POLNA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|120593376|gb|ABM36815.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas
naphthalenivorans CJ2]
Length = 636
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 144/367 (39%), Positives = 195/367 (53%), Gaps = 79/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +D FG HSSTSISA L GMA+ + G+N
Sbjct: 89 MGTLRQLGGLSGFPRRDESEYDTFGTAHSSTSISAAL----------GMALAAEFKGENR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN--KALKRLHSNP------------QFRQLCQEA 99
+ ++VI +G+ A M++EA+NNAGV + K L L+ N QL
Sbjct: 139 NAVAVIGDGSMSAGMAFEALNNAGVHDHCKLLVVLNDNDMSISPPVGALNRHLAQLMSGR 198
Query: 100 F--SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLA 152
F S++ +K + +R +E+ ++ A FE G YIGP+DGH+LE L
Sbjct: 199 FYASARHVGKKVLQVAPPLLELARRLESHAKGMVVPAAVFESFGFNYIGPIDGHDLESLI 258
Query: 153 YVLKQVKAIPDPGA--VLIHVITEK--------------------------EKAMLPLKL 184
L+ ++ + GA +HV+T+K +K+ P K
Sbjct: 259 PTLENIRHLMATGAGPQFLHVVTKKGQGYKLAEADPIAYHGPGKFDPSMGLQKSSAPAKQ 318
Query: 185 QQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T++F + L D R+ G G+G+ F K FP R DVGIAEQHAVTFAAG
Sbjct: 319 TFTQVFGRWLCDMAEHDPRLVGITPAMREGSGMVEFHKRFPKRYHDVGIAEQHAVTFAAG 378
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+A EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+D +
Sbjct: 379 MACEGLKPVLAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIPY 438
Query: 292 MACLPNM 298
+ C+PNM
Sbjct: 439 LRCIPNM 445
>gi|340361659|ref|ZP_08684076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria macacae ATCC
33926]
gi|339888325|gb|EGQ77793.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria macacae ATCC
33926]
Length = 637
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 147/385 (38%), Positives = 193/385 (50%), Gaps = 97/385 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+R+ GL E+ +DAFGVGHSSTSI A L GMA LLG +
Sbjct: 91 MHTMRRYGGLAGFPKRSESEYDAFGVGHSSTSIGAAL----------GMAAADKLLGNDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN----PQFRQ------- 94
+++I +GA A ++EA+N AG +LN + N P++
Sbjct: 141 RSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 95 ---LCQEAFSSKDKKQKFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
L S K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 RGVLSTIKAQSSKVLDKLPGAMELAQKVEHKIKTLAGEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E L VLK ++ P L+HVIT+K
Sbjct: 261 DGHNVEHLVDVLKDLRGRKGPQ--LLHVITKKGNGYKLAENDPVKYHAVANLPKDVSDDL 318
Query: 176 ------EKAMLPL-KLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRC 215
EK P K T++F K L D+R+ G+GL F++ FP R
Sbjct: 319 KTATSSEKENKPAAKPTYTQVFGKWLCDQAAADSRLAAITPAMREGSGLVEFEQQFPDRY 378
Query: 216 FDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGL 275
FDVGIAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+
Sbjct: 379 FDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQRGYDQLVHDIALQNLPVLFAVDRAGI 438
Query: 276 VGADGPTHCGAFDTTFMACLPNMVV 300
VGADGPTH G +D +F+ C+PNM++
Sbjct: 439 VGADGPTHAGLYDLSFLRCVPNMII 463
>gi|366166852|ref|ZP_09466607.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetivibrio cellulolyticus
CD2]
Length = 624
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/367 (39%), Positives = 190/367 (51%), Gaps = 80/367 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+R+ GL E+ HD+F GHSSTSISA L G+A RDL +NN V
Sbjct: 91 TLRKLGGLSGFPKVNESEHDSFNTGHSSTSISAAL----------GIAKARDLKKENNSV 140
Query: 56 ISVIVEGATIARMSYEAINNAGVL-NKALKRLHSNPQFRQLCQEAFS---SKDKKQKFGG 111
I+VI +GA M++EA+NNAG N + L+ N S SK + + F
Sbjct: 141 IAVIGDGALTGGMAFEALNNAGRFPNNFIVVLNDNEMSISKNVGGLSKYLSKIRTEPFYF 200
Query: 112 QMHE-IDAFSREIEAGSRAC-------------------FFEDLGLYYIGPVDGHNLEDL 151
++ E ID +I A ++ FE+LG Y+GPVDGHN+ +L
Sbjct: 201 KVKEDIDLMLNKIPAIGKSAAKALGRVKGSIKYAIMPGIIFEELGFKYLGPVDGHNITEL 260
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKA-------------MLPLKLQQT----------- 187
+L K I P VL+HV T+K K + P +++
Sbjct: 261 EKLLTVAKGIKGP--VLLHVSTQKGKGYTYAEENPHVFHGIAPFEIETGEVISHGGPGYS 318
Query: 188 ----RLFCKILDNR---------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
R KI N M GTGL LF K FP R FDVGIAEQHAVTFAAGLA
Sbjct: 319 EIFGRELSKIAQNDESVVAISAAMPHGTGLELFSKKFPERFFDVGIAEQHAVTFAAGLAR 378
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
G+KP A+YSSFLQR +DQV HDV +Q L V FAIDRAG+VG DG TH G +D +F++
Sbjct: 379 SGMKPVVALYSSFLQRAYDQVLHDVAIQNLHVVFAIDRAGIVGEDGETHQGIYDISFLSH 438
Query: 295 LPNMVVM 301
+PN+ ++
Sbjct: 439 IPNITIL 445
>gi|340785926|ref|YP_004751391.1| 1-deoxy-d-xylulose-5-phosphate synthase [Collimonas fungivorans
Ter331]
gi|340551193|gb|AEK60568.1| 1-deoxy-D-xylulose 5-phosphate synthase [Collimonas fungivorans
Ter331]
Length = 623
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 189/372 (50%), Gaps = 89/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ G+ +
Sbjct: 88 MHTLRQLDGISGFPRRAESEYDTFGTAHSSTSISAVL----------GMALAAKTKGETD 137
Query: 54 -HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSN 89
H I+VI +GA A M +EA+NNAGV LN+ L RL S
Sbjct: 138 RHAIAVIGDGAMTAGMVFEAMNNAGVYDDINMLVILNDNDMSISPPVGALNRYLARLMSG 197
Query: 90 PQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS--RACFFEDLGLYYIGPVDGHN 147
+ Q + K G M ++ E G A FE+ G YIGP+DGH+
Sbjct: 198 QFYAQ------AKNVGKSILPGPMRQLAKRFEEHAKGMVVPATMFEEFGFNYIGPIDGHD 251
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKE-------------------------KAMLPL 182
LE L L+ +K + P +HV+T+K K
Sbjct: 252 LESLIPTLQNLKNLKGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPATVS 309
Query: 183 KLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
K+ T++F L D++ M GG+GL+ F + FP R +DVGIAEQHAVTFA
Sbjct: 310 KMTYTQVFGDWLCDMAAQDDKLIGITPAMSGGSGLDTFAQRFPQRFYDVGIAEQHAVTFA 369
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EGLKP AIYS+FLQR +DQ+ HDV LQ L V FA+DR+GLVGADG TH G +D
Sbjct: 370 AGLACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRSGLVGADGATHAGNYDM 429
Query: 290 TFMACLPNMVVM 301
++ C+PNMVVM
Sbjct: 430 AYLRCIPNMVVM 441
>gi|326790851|ref|YP_004308672.1| deoxyxylulose-5-phosphate synthase [Clostridium lentocellum DSM
5427]
gi|326541615|gb|ADZ83474.1| deoxyxylulose-5-phosphate synthase [Clostridium lentocellum DSM
5427]
Length = 620
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 148/373 (39%), Positives = 188/373 (50%), Gaps = 89/373 (23%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
RT+RQ G+ E+ HD F GHSSTSISA L GMA RDL G++
Sbjct: 90 RTLRQLDGMSGFPKRVESPHDVFETGHSSTSISAAL----------GMAKARDLKGEDYK 139
Query: 55 VISVIVEGATIARMSYEAINNAG--------VLN--------------KALKRLHSNPQF 92
V++VI +GA M++EA+NNAG VLN K L +L S+ +
Sbjct: 140 VVAVIGDGALTGGMAFEALNNAGRGNTNLIVVLNDNEMSISKNVGGIGKYLNKLRSSQDY 199
Query: 93 RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS----RACFFEDLGLYYIGPVDGHNL 148
+ +E K G+ H + R E+ + FE LG YIGPVDG L
Sbjct: 200 LK-AKEDVEDVLHKVPLVGE-HMVSTIKRTKESVKSFVMQNTLFEQLGFTYIGPVDGQKL 257
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEK------------------------------- 177
+L + + KA+ P +LIHV T+K K
Sbjct: 258 PELIDLFENAKAMKGP--LLIHVKTKKGKGYLAAERKPSYYHGVGPFCIATGEGASKTGD 315
Query: 178 ---------AMLPLKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
AM+ L Q+ +L + M GTGL F K P R FDVGIAEQHAVTF
Sbjct: 316 YTFSEAFGEAMVDLAHQEEKLVG--ITAAMPEGTGLLPFAKVHPKRFFDVGIAEQHAVTF 373
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLA EG KP A+YSSFLQR +DQ+ HDV LQ LPV FA+DRAGLVG DGPTH G +D
Sbjct: 374 AAGLATEGYKPVVAVYSSFLQRAYDQILHDVCLQNLPVIFAVDRAGLVGEDGPTHHGLYD 433
Query: 289 TTFMACLPNMVVM 301
F++ +PNM ++
Sbjct: 434 MAFLSSMPNMTIL 446
>gi|254804309|ref|YP_003082530.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
alpha14]
gi|254667851|emb|CBA03886.1| 1-deoxy-D-xylulose 5-phosphate synthase [Neisseria meningitidis
alpha14]
Length = 637
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 148/381 (38%), Positives = 194/381 (50%), Gaps = 93/381 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFGVGHSSTSI A L GMA LG +
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAAL----------GMAAADKQLGSDR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFS------ 101
+++I +GA A ++EA+N AG ++ L + +P L + S
Sbjct: 141 CSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDM 200
Query: 102 ----SKDKKQ------KFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGPV 143
S K Q K G M H+I + E E ++ FE+ G Y GPV
Sbjct: 201 HGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPV 260
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK---------------------------- 175
DGHN+E+L VL+ ++ P L+HVIT+K
Sbjct: 261 DGHNVENLVDVLEDLRGRKGP--QLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQM 318
Query: 176 --EKAMLPL-KLQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVG 219
EK P K T++F K L +R M G+GL F++ FP R FDVG
Sbjct: 319 PSEKEPKPAAKPTYTQVFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVG 378
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFA GLA EG+KP AIYS+FLQR +DQ+ HD+ LQ LPV FA+DRAG+VGAD
Sbjct: 379 IAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGAD 438
Query: 280 GPTHCGAFDTTFMACLPNMVV 300
GPTH G +D +F+ C+PNM+V
Sbjct: 439 GPTHAGLYDLSFLRCIPNMIV 459
>gi|251773173|gb|EES53726.1| deoxyxylulose-5-phosphate synthase [Leptospirillum
ferrodiazotrophum]
Length = 630
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 191/385 (49%), Gaps = 109/385 (28%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+ TIRQ GL E+ HDAF GH+ TS+SA L GMA RD+LG +
Sbjct: 89 LPTIRQWNGLCGFPKREESPHDAFSAGHAGTSVSAAL----------GMAEARDVLGDSY 138
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
HVI+VI +G+ A M+ EA+N N G L+ L R+ ++P
Sbjct: 139 HVIAVIGDGSLTAGMAMEALNQAGARKKKLLVILNDNNLSISENVGALSSYLARISADPM 198
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRAC-------------FFEDLGLY 138
++ K+K G + +I ++ +R +FE++GL
Sbjct: 199 IDEM----------KRKTGAILRDIPVIGDQVARFARVAHGQMVGMISPPGQWFEEMGLS 248
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPD-PGAVLIHVITEKEK-------------------- 177
Y+GP+DGH DL +++ + A+ D PG VL+HV T K K
Sbjct: 249 YVGPLDGH---DLPLLIETLSALKDRPGPVLLHVRTVKGKGYEPAEKSPIAFHGVGPFDP 305
Query: 178 ---------------------AMLPLKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCF 216
AM+ L + LF + M GTGL+ F K FP R
Sbjct: 306 ETGIFKKKSGGPPAYTKVFGQAMIELAREIPELFA--ITAAMPEGTGLSDFAKLFPERFV 363
Query: 217 DVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLV 276
DVGIAEQHAVT A G+AA+GL+P AIYS+FLQR +DQV HD+ LQ LPV FA+DR GLV
Sbjct: 364 DVGIAEQHAVTLAGGMAAQGLRPVAAIYSTFLQRAYDQVVHDICLQNLPVLFALDRGGLV 423
Query: 277 GADGPTHCGAFDTTFMACLPNMVVM 301
G DGPTH G FD ++ +PN+V+M
Sbjct: 424 GEDGPTHHGVFDIAYLRHIPNLVLM 448
>gi|39996863|ref|NP_952814.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
PCA]
gi|409912285|ref|YP_006890750.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
KN400]
gi|81702248|sp|Q74CB0.1|DXS2_GEOSL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
synthase 2; Short=DXPS 2
gi|39983751|gb|AAR35141.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
PCA]
gi|298505876|gb|ADI84599.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
KN400]
Length = 626
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 143/368 (38%), Positives = 189/368 (51%), Gaps = 79/368 (21%)
Query: 1 MRTIRQTCGL----ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVI 56
+RT+ G E+ HD F GH+STSISA L G+A RDL G+NN V+
Sbjct: 92 LRTLGGISGFLKRAESPHDVFDAGHASTSISAAL----------GLAAARDLAGRNNKVV 141
Query: 57 SVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQE-AFS 101
+VI +G+ ++YE +N+AG LN+ L + ++ + R + E +
Sbjct: 142 AVIGDGSMTGGIAYEGLNHAGHLNRDLVVVLNDNEMSIAENVGALSNFLSRTVTSEFVHT 201
Query: 102 SKDKKQKFGGQMHEID----AFSREIEAGSRACF-----FEDLGLYYIGPVDGHNLEDLA 152
K + F G + I ++ E + F FE G YIGP+DGH++ L
Sbjct: 202 LKKDVETFLGGLDRIGRNVLKVAKRAEESLKGLFTPGMLFEAFGFEYIGPIDGHDIGRLT 261
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
++VK D AVLIHV+T+K K P + +
Sbjct: 262 ETFEKVKRFDD--AVLIHVLTKKGKGFAPAEAKPSLFHGVGPFDPVSGEIVKGKGGATSY 319
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + L D R M GTGL F P R FDVGIAEQH VTFAAGLA
Sbjct: 320 TGVFGQALTRIADEDERVVAITAAMPDGTGLGSFSARHPGRFFDVGIAEQHGVTFAAGLA 379
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG +P AIYSSFLQR +DQ+ HDV L LPV FAIDR+G+VG+DGPTH G FD +++
Sbjct: 380 AEGYRPVFAIYSSFLQRAYDQLFHDVCLMNLPVTFAIDRSGVVGSDGPTHHGLFDLSYLR 439
Query: 294 CLPNMVVM 301
LPNMVVM
Sbjct: 440 TLPNMVVM 447
>gi|220931497|ref|YP_002508405.1| deoxyxylulose-5-phosphate synthase [Halothermothrix orenii H 168]
gi|254782076|sp|B8D2I3.1|DXS_HALOH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|219992807|gb|ACL69410.1| deoxyxylulose-5-phosphate synthase [Halothermothrix orenii H 168]
Length = 636
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 189/374 (50%), Gaps = 93/374 (24%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TIRQ GL E++HD GHSSTSISA L G+A+ RDL +N+ +
Sbjct: 91 TIRQYKGLSGFPKYSESIHDVIETGHSSTSISAAL----------GLALARDLKNRNDRI 140
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
+VI +GA M++EA+N N G L+ L R+ ++P
Sbjct: 141 YAVIGDGALTGGMAFEALNHAGHLGTDIKVVLNDNAMSISKNVGALSHYLSRIRTDPTLS 200
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEA---GSRACF-----FEDLGLYYIGPVDG 145
+ + + K G + SR +E G + F FE++G Y+GP+DG
Sbjct: 201 KFKDDVEVLLSRIPKIG------NTVSRSVERVKDGLKYLFLSGVLFEEMGFTYMGPLDG 254
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL---------------- 189
HN+++L K I P VLIHV T+K K P + Q ++
Sbjct: 255 HNIQELITNFKNADNIKGP--VLIHVNTKKGKGYKPAESQPSKFHGVSPFKIDNGESKRK 312
Query: 190 -----FCKI-------LDNR----------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
+ ++ L N+ M GTGL+ F+K FP R FDVGIAEQHAVT
Sbjct: 313 KSNFTYSQVFGQTMVKLGNKDKKIVGITAAMPEGTGLSYFKKEFPDRFFDVGIAEQHAVT 372
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
A G+A G+KP AIYS+FLQR +DQV HD +Q LPV FAIDRAG+VGADG TH G F
Sbjct: 373 LATGMARAGMKPVVAIYSTFLQRAYDQVIHDACIQNLPVTFAIDRAGIVGADGETHHGLF 432
Query: 288 DTTFMACLPNMVVM 301
D +F+ +PN+++M
Sbjct: 433 DLSFLRAIPNIIIM 446
>gi|410641963|ref|ZP_11352481.1| 1-deoxy-D-xylulose-5-phosphate synthase [Glaciecola chathamensis
S18K6]
gi|410138280|dbj|GAC10668.1| 1-deoxy-D-xylulose-5-phosphate synthase [Glaciecola chathamensis
S18K6]
Length = 621
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 143/367 (38%), Positives = 187/367 (50%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D F VGHSSTSISA VGMAV +
Sbjct: 95 MPTIRQKNGLHPFPWPNESDYDTFAVGHSSTSISAA----------VGMAVAAEKEALGR 144
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
V++VI +GA A M++EA+N+ G ++K + + ++ + R L
Sbjct: 145 KVVAVIGDGAMTAGMAFEALNHGGDIDKDMLVILNDNEMSISENVGALNSHLARLLTGNF 204
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
F+S +D +K + I F+ E + FE+LG YIGP+DGH++ +
Sbjct: 205 FNSIRDGGKKLLSSVPPIKEFASRAEEHIKGMVVPGTIFEELGFNYIGPIDGHDVNGVVD 264
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAM----------------------LPLKLQQTRLFC 191
LK ++ I GA ++HV+T+K K LP F
Sbjct: 265 TLKNMRNIK--GAQILHVVTKKGKGYELAEKDPIKFHAVPKFNPSADGLPKAAPSDPTFS 322
Query: 192 KILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
KI M G+G+ F + FP + FDV IAEQHAVTFAAGLA
Sbjct: 323 KIFGRWLCDMATQDPNLMAVTPAMREGSGMVEFSQKFPEQYFDVAIAEQHAVTFAAGLAK 382
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EG AIYS+FLQR +DQV HDV LQ+LPV FAIDRAGLVGADGPTH GAFD F+ C
Sbjct: 383 EGQNAVVAIYSTFLQRAYDQVIHDVALQELPVLFAIDRAGLVGADGPTHQGAFDIPFLRC 442
Query: 295 LPNMVVM 301
+PNMV+M
Sbjct: 443 IPNMVIM 449
>gi|222529279|ref|YP_002573161.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor bescii DSM
6725]
gi|222456126|gb|ACM60388.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor bescii DSM
6725]
Length = 616
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 194/377 (51%), Gaps = 89/377 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+R+ GL E+++D+F GHSSTSIS L G AV RDL ++ V
Sbjct: 90 TLRKFGGLSGFPKSKESIYDSFDTGHSSTSISVAL----------GFAVARDLKNEDYDV 139
Query: 56 ISVIVEGATIARMSYEAINNAGVLN----------------------KALKRLHSNPQFR 93
I+VI +GA ++YE +NNAG N K L ++ + P++
Sbjct: 140 IAVIGDGALTGGLAYEGLNNAGRYNGKLLVILNDNDMSISKNVGAIAKYLSKVRTKPRYF 199
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFF-----EDLGLYYIGPVDGHNL 148
+L + A S + G + + F R+++ + FF E LG Y GP+DGH++
Sbjct: 200 KLKKAADSLVEGIPIVGKNLSK---FVRKVKGSLKYFFFPGTLFEALGFEYYGPIDGHDI 256
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAM-----LPLKLQ----------------QT 187
E L V K VK P VL+HV+T+K K P K +
Sbjct: 257 ERLCEVFKSVKDFERP--VLVHVVTQKGKGYEHAERFPEKFHGVPPFDIETGNHLSDNTS 314
Query: 188 RLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+ F ++L ++ M GTGL+ F K +P R FDVGIAE+HAVTFA
Sbjct: 315 KTFSEVLGDKLCELAKRNPKILAITAAMPDGTGLSRFAKMYPQRFFDVGIAEEHAVTFAG 374
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
LA EG KPF AIYS+FLQR FDQ+ HDV LQ L V F +DRAGLVG DG TH G+FD +
Sbjct: 375 ALAKEGFKPFVAIYSTFLQRAFDQIIHDVCLQNLNVVFCVDRAGLVGEDGETHHGSFDIS 434
Query: 291 FMACLPNMVVM--KDIK 305
+++ +PN+ +M KD K
Sbjct: 435 YLSLIPNLTLMVPKDTK 451
>gi|339484558|ref|YP_004696344.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas sp. Is79A3]
gi|338806703|gb|AEJ02945.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas sp. Is79A3]
Length = 614
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 144/366 (39%), Positives = 193/366 (52%), Gaps = 77/366 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +R GL E+ +DAFG HSSTSISA L GMAV L +
Sbjct: 89 MSKLRMQGGLAGFPRRDESEYDAFGTAHSSTSISAAL----------GMAVAAQLNKTDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHS-------------NPQFRQLCQEAF 100
I++I +GA A M++EA+NNAGV++ L + + N +L F
Sbjct: 139 RAIAIIGDGAMSAGMAFEALNNAGVMDANLLVILNDNDMSISRPVGALNNYLAKLMSGRF 198
Query: 101 SSKDKK--QKFGG---QMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLEDLAY 153
+ ++ +K G M E+ + E G + FE+ G YIGP+DGH+L+ L
Sbjct: 199 YATARRAGEKVLGVVPPMLELAKRAEEHVKGMVTPGTLFEEFGFNYIGPIDGHDLDVLIT 258
Query: 154 VLKQVKAIPDPGAVLIHVITEK----------------------EKAMLPL---KLQQTR 188
L +K + P +HV+T K EK ++P K T+
Sbjct: 259 TLNNIKLLDGPQ--FLHVVTRKGAGYKVAEEDPILYHGVGKFDPEKGIIPKSAGKPAYTQ 316
Query: 189 LFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAE 235
+F L D+R+ G G+GL F + +P R FDVGIAEQHAVTFAAG A +
Sbjct: 317 IFGDWLCDMAAQDSRLIGITPAMREGSGLVRFSQEYPERYFDVGIAEQHAVTFAAGAACD 376
Query: 236 GLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACL 295
GLKP AIYS+FLQR +DQ+ HDV +Q LPV FAIDRAGLVGADGPTH G+FD +++ C+
Sbjct: 377 GLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVVFAIDRAGLVGADGPTHAGSFDLSYLRCI 436
Query: 296 PNMVVM 301
PNM VM
Sbjct: 437 PNMTVM 442
>gi|197121568|ref|YP_002133519.1| deoxyxylulose-5-phosphate synthase [Anaeromyxobacter sp. K]
gi|229807525|sp|B4UHF5.1|DXS_ANASK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|196171417|gb|ACG72390.1| deoxyxylulose-5-phosphate synthase [Anaeromyxobacter sp. K]
Length = 636
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 189/371 (50%), Gaps = 84/371 (22%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
RTIR GL E+ HDAFGVGH+ST+ISA L GM + + G+
Sbjct: 90 RTIRTEGGLAGFPERHESAHDAFGVGHASTAISAAL----------GMIEAKRVTGEPGK 139
Query: 55 VISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFSSKDKKQK 108
V++V+ +GA +++E +N AG L + L + +P L E FS K +
Sbjct: 140 VVAVVGDGAMTGGVAFEGLNQAGYLGRNLLVVLNDNEMSISPNVGAL-SEWFSKKFASRT 198
Query: 109 FGGQMHEIDAFSREIEAGSRAC------------------FFEDLGLYYIGPVDGHNLED 150
+ ++ F + G A FE LG +Y+GPVDGH+++
Sbjct: 199 YNRWRRQVKEFLESVPKGPEAIEIIRHGINATKALVTPGILFEGLGFHYVGPVDGHDVKG 258
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L +++ AI D G VL+H IT K K P + +
Sbjct: 259 LVETFQKL-AIFD-GPVLLHAITTKGKGYHPAESDKATRGHGLSFFDVATGKPVKKSPGA 316
Query: 187 ---TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T LF + L D R M GTGL ++ FP R +DVGIAEQHAVTFAA
Sbjct: 317 KAYTDLFAEALCEEMEHDPRVVAITAAMLEGTGLIKAKQRFPDRTYDVGIAEQHAVTFAA 376
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA EG++P AIYS+FLQR +DQ+ HDV LQKLPV FA+DR GLVGADG TH GAFD
Sbjct: 377 GLACEGIRPVVAIYSTFLQRAYDQIIHDVALQKLPVTFALDRGGLVGADGKTHQGAFDLA 436
Query: 291 FMACLPNMVVM 301
++ C+P +VVM
Sbjct: 437 YLRCVPGLVVM 447
>gi|399053796|ref|ZP_10742595.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus sp. CF112]
gi|398048573|gb|EJL41045.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus sp. CF112]
Length = 628
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 140/369 (37%), Positives = 181/369 (49%), Gaps = 85/369 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ GL E+ HD + GHSSTS+SA + GMA RDL + NHV
Sbjct: 89 TLRQYKGLCGFPKMNESPHDVWETGHSSTSLSAAM----------GMATARDLKKEKNHV 138
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
+++I +GA M+ EA+N N G L+ L ++ S ++
Sbjct: 139 VAIIGDGALTGGMALEALNHIGHERKNVIVVLNDNEMSIAPNVGALHNYLGKIRSTENYQ 198
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
E GG++ I D+ + +G FE+LG YIGP+DGHN+
Sbjct: 199 WAKDEVEGLLKSIPAVGGKLASIAERFKDSMKYLLVSG---VLFEELGFTYIGPIDGHNM 255
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
E L LK K P VLIH IT+K K P +
Sbjct: 256 ELLVDTLKTAKQTKGP--VLIHAITKKGKGYAPAEADSVKWHGIGTYKIESGDTPKSAPT 313
Query: 187 -TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
T +F + + M G+GL F + +P R FDVGIAEQHA TFAAGL
Sbjct: 314 YTSVFAETMIELAAEDKSLVAVTPAMPAGSGLIPFGQKYPDRLFDVGIAEQHACTFAAGL 373
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
A +GLKP AIYS+FLQR +DQ+ HDV QKL V FA+DRAGLVGADG TH G +D FM
Sbjct: 374 ATQGLKPVLAIYSTFLQRAYDQLIHDVARQKLNVVFAVDRAGLVGADGETHQGMYDIAFM 433
Query: 293 ACLPNMVVM 301
+PNMV+M
Sbjct: 434 RIIPNMVIM 442
>gi|85711192|ref|ZP_01042252.1| Deoxyxylulose-5-phosphate synthase [Idiomarina baltica OS145]
gi|85695105|gb|EAQ33043.1| Deoxyxylulose-5-phosphate synthase [Idiomarina baltica OS145]
Length = 615
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 144/367 (39%), Positives = 191/367 (52%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+ TIRQ GL E+ +D VGHSSTSISA L GMAV G N
Sbjct: 89 LHTIRQKDGLHPFPWREESEYDVLSVGHSSTSISAAL----------GMAVAAQRSGSNE 138
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF 100
V+S+I +GA A M +EA+N+AG VLN + N F +L F
Sbjct: 139 KVVSIIGDGAMTAGMVFEAMNHAGDIKPDMLVVLNDNDMSISENVGALNQHFARLLSGRF 198
Query: 101 SSKDKKQ-----KFGGQMHEIDAFSREIEAGSRA--CFFEDLGLYYIGPVDGHNLEDLAY 153
+K ++Q K +H + + + E G A FE+LG YIGP+DGH+++ L
Sbjct: 199 YTKIREQGKKLLKPLPPIHHLASRAEEHMKGMMAPGTIFEELGFNYIGPIDGHDVDTLVE 258
Query: 154 VLKQVKAIPDPGAVLIHVITEKEK----------------------AMLPLKLQQTRLFC 191
L+ +K + P L+HV+T+K K + LP K +
Sbjct: 259 TLRNMKHLRGPQ--LLHVVTQKGKGYRPAEADPIGYHGVPKFDPSLSKLPAKKPGIPSYS 316
Query: 192 KILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++ + M G+G+ F K +P + FDV IAEQH+VT+AAGLA
Sbjct: 317 EVFGDWLCDHAQDDAKLMAITPAMREGSGMVKFSKLYPEQYFDVAIAEQHSVTYAAGLAI 376
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
GLKP AIYS+FLQR +DQV HDV LQ L V FAIDRAG+VGADGPTH GAFD +++ C
Sbjct: 377 AGLKPVVAIYSTFLQRAYDQVIHDVALQNLDVLFAIDRAGIVGADGPTHQGAFDLSYLRC 436
Query: 295 LPNMVVM 301
+PNMVVM
Sbjct: 437 IPNMVVM 443
>gi|294670646|ref|ZP_06735522.1| hypothetical protein NEIELOOT_02369 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307616|gb|EFE48859.1| hypothetical protein NEIELOOT_02369 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 540
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 197/378 (52%), Gaps = 90/378 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +D FGVGHSSTSI A L GMAV L G+ N
Sbjct: 1 MDTMRQYGGLAGFPKRGESEYDDFGVGHSSTSIGAAL----------GMAVADKLAGRAN 50
Query: 54 HVISVIVEGATIARMSYEAINNAG---------VLNKALKRLHSN----PQF--RQLCQE 98
++VI +GA A ++EA+N AG +LN + N P++ R + ++
Sbjct: 51 RSVAVIGDGAMTAGQAFEALNCAGDMQDVDLLVILNDNEMSISPNVGALPKYLARNVMRD 110
Query: 99 ------AFSSKDKK--QKFGGQM-------HEIDAFSREIEAGSRA-CFFEDLGLYYIGP 142
++ +K K G + H+I + E ++ FE+ G Y GP
Sbjct: 111 MHGLLSTIKAQSEKVLDKLPGALEIAQKVEHKIKTLANEGNHIKQSLSLFENFGFAYTGP 170
Query: 143 VDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------- 175
DGHN+ L L +++ PG L+HVIT+K
Sbjct: 171 ADGHNVVQLVETLNELRR--KPGPKLLHVITKKGQGYKLAENDPVKYHAIGKAPAQSDRP 228
Query: 176 EKAMLPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAE 222
+ P + T++F + L D+R+ G+GL F++ FP R FDVGIAE
Sbjct: 229 SETPAPSRPTYTQIFGQWLCDQAEADHRLAAITPAMREGSGLVEFEQRFPDRYFDVGIAE 288
Query: 223 QHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPT 282
QHAVTFAAGLA EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAG+VGADGPT
Sbjct: 289 QHAVTFAAGLACEGIKPVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGIVGADGPT 348
Query: 283 HCGAFDTTFMACLPNMVV 300
H GA+D +F+ C+PNMV+
Sbjct: 349 HAGAYDLSFLRCVPNMVI 366
>gi|194334491|ref|YP_002016351.1| 1-deoxy-D-xylulose-5-phosphate synthase [Prosthecochloris aestuarii
DSM 271]
gi|194312309|gb|ACF46704.1| deoxyxylulose-5-phosphate synthase [Prosthecochloris aestuarii DSM
271]
Length = 659
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 143/380 (37%), Positives = 195/380 (51%), Gaps = 96/380 (25%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T R+ GL E+ HDAFG GH+STSISA A RDL G N
Sbjct: 100 MHTNRRFNGLAGFPKIHESRHDAFGTGHASTSISAAAGM----------AAARDLEGGNE 149
Query: 54 HVISVIVEGATIARMSYEAINNAG---------------------------VLNKALKRL 86
+I+VI +G+ M++EA+N+ G ++N +L +
Sbjct: 150 KIIAVIGDGSMTGGMAFEAMNHLGDLKSDVLVILNDNQMAISPSTGGLRDYLINISLNKT 209
Query: 87 HSNPQFRQLCQEAFS--SKDKKQKFGGQMHEI-DAFSREIEAGSRACFFEDLGLYYIGPV 143
++ + RQ + S + D +H+I D + G FFE LG Y GP+
Sbjct: 210 YN--KLRQFVWNSLSLINNDVGDAAKTAIHKIEDGIKASLTPG---AFFEALGFRYFGPI 264
Query: 144 DGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQT---------------- 187
DGHN++ L +K+++A+P P L+HVIT+K K LP + Q+
Sbjct: 265 DGHNMDQLVKAMKEMQALPHPK--LLHVITKKGKGFLPAEQNQSAWHAHSGGFDRTTGES 322
Query: 188 -------------RLFCKIL-----DNR--------MGGGTGLNLFQKHFPIRCFDVGIA 221
+F + L ++R M GT L++FQK P R +DVGIA
Sbjct: 323 LKPSQKKSPPKYQEIFGEALTEIATNDRKIVGITAAMPSGTSLDIFQKAHPRRFYDVGIA 382
Query: 222 EQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGP 281
EQHAV+FAAGLAA G KP CAIYS+FLQR +DQ+ HDV LQ V FAIDRAGLVG DGP
Sbjct: 383 EQHAVSFAAGLAAHGYKPVCAIYSTFLQRAYDQLIHDVALQNQHVIFAIDRAGLVGEDGP 442
Query: 282 THCGAFDTTFMACLPNMVVM 301
TH G+FD +++ +PNMV+M
Sbjct: 443 THHGSFDLSYLHPVPNMVIM 462
>gi|312793470|ref|YP_004026393.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180610|gb|ADQ40780.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 616
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 143/377 (37%), Positives = 197/377 (52%), Gaps = 89/377 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+R+ GL E++ D+F GHSSTSIS L G AV RDL +N++V
Sbjct: 90 TLRKFGGLSGFPKSKESIFDSFDTGHSSTSISVAL----------GFAVARDLEKENHNV 139
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLN--------------KALKRLHSNPQFR 93
I+VI +GA ++YE +NNAG VLN K L ++ + P++
Sbjct: 140 IAVIGDGALTGGLAYEGLNNAGRYNGKLLVVLNDNDMSISKNVGAIAKYLSKVRTKPRYF 199
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFF-----EDLGLYYIGPVDGHNL 148
+L + A S + G + + F R+++ + FF E LG Y GP+DGH++
Sbjct: 200 KLKKAADSLVEGIPVVGKNLSK---FVRKVKGSLKYFFFPGTLFEALGFEYYGPIDGHDI 256
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAM-----LPLKLQ----------------QT 187
E L V + VK P VL+HV+T+K K P K +
Sbjct: 257 ERLCEVFESVKDFERP--VLVHVVTQKGKGYEHAERFPEKFHGVPPFDIETGNHLSDNTS 314
Query: 188 RLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+ F ++L ++ M GTGL+ F K +P R FDVGIAE+HAVTFA
Sbjct: 315 KTFSEVLGDKLCELAKCNPKILAITAAMPDGTGLSKFAKMYPQRFFDVGIAEEHAVTFAG 374
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
LA EG KPF AIYS+FLQR FDQ+ HDV LQ L V F +DRAGLVG DG TH G+FD +
Sbjct: 375 ALAKEGFKPFVAIYSTFLQRAFDQIIHDVCLQNLNVVFCVDRAGLVGEDGETHHGSFDIS 434
Query: 291 FMACLPNMVVM--KDIK 305
+++ +PN+ +M KD K
Sbjct: 435 YLSLIPNLTLMVPKDTK 451
>gi|312602677|ref|YP_004022522.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia rhizoxinica
HKI 454]
gi|312169991|emb|CBW77003.1| 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) [Burkholderia
rhizoxinica HKI 454]
Length = 655
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 148/367 (40%), Positives = 194/367 (52%), Gaps = 80/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ DAFG HSSTSISA L GMAV L G+++
Sbjct: 110 MSTLRQWNGISGFPRRSESQFDAFGTAHSSTSISAAL----------GMAVASQLKGEHH 159
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN--KALKRLHSN-----PQFRQLCQEAFSSKDKK 106
I+VI +GA A ++EA+NNAGV L L+ N P L Q + K
Sbjct: 160 RAIAVIGDGAMTAGEAFEALNNAGVCEDIPLLVVLNDNDMSISPPVGALNQ--YLVKLMS 217
Query: 107 QKFGGQMHE---------IDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLA 152
+F E + AF+ ++E ++ A FE+ G YIGP+DGH+L+ L
Sbjct: 218 GRFYANAKEGVRKILPLPMLAFAHKLEEHAKGMVTPATLFEEFGFNYIGPIDGHDLDALI 277
Query: 153 YVLKQVKAIPDPGAVLIHVITEKE-------------------------KAMLPLKLQQT 187
L+ ++ + P +HV+T+K K K T
Sbjct: 278 PTLQNIRGLRGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAASSKKTYT 335
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F + L D R+ G G+GL F++ FP R FDVGIAEQHAVTFA GLAA
Sbjct: 336 QVFGEWLCDAAELDPRVVGITPAMREGSGLVEFEQRFPQRYFDVGIAEQHAVTFAGGLAA 395
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+ RAGLVGADG TH GA+D ++ C
Sbjct: 396 EGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALARAGLVGADGATHAGAYDMAYLRC 455
Query: 295 LPNMVVM 301
+PNMVVM
Sbjct: 456 IPNMVVM 462
>gi|220916331|ref|YP_002491635.1| deoxyxylulose-5-phosphate synthase [Anaeromyxobacter dehalogenans
2CP-1]
gi|254782058|sp|B8JFY1.1|DXS_ANAD2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|219954185|gb|ACL64569.1| deoxyxylulose-5-phosphate synthase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 636
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 189/371 (50%), Gaps = 84/371 (22%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
RTIR GL E+ HDAFGVGH+ST+ISA L GM + + G+
Sbjct: 90 RTIRTEGGLAGFPERHESAHDAFGVGHASTAISAAL----------GMIEAKRVTGEPGK 139
Query: 55 VISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFSSKDKKQK 108
V++V+ +GA +++E +N AG L + L + +P L E FS K +
Sbjct: 140 VVAVVGDGAMTGGVAFEGLNQAGYLGRNLLVVLNDNEMSISPNVGAL-SEWFSKKFASRT 198
Query: 109 FGGQMHEIDAFSREIEAGSRAC------------------FFEDLGLYYIGPVDGHNLED 150
+ ++ F + G A FE LG +Y+GPVDGH+++
Sbjct: 199 YNRWRRQVKEFLESVPKGPEAIEIIRHGINATKALVTPGILFEGLGFHYVGPVDGHDVKG 258
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L +++ AI D G VL+H IT K K P + +
Sbjct: 259 LVETFQKL-AIFD-GPVLLHAITTKGKGYHPAESDKATRGHGLSFFDVATGKPVKKSPGA 316
Query: 187 ---TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T LF + L D R M GTGL ++ FP R +DVGIAEQHAVTFAA
Sbjct: 317 KAYTDLFAEALCEEMEHDPRVVAITAAMLEGTGLIKAKQRFPDRTYDVGIAEQHAVTFAA 376
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA EG++P AIYS+FLQR +DQ+ HDV LQKLPV FA+DR GLVGADG TH GAFD
Sbjct: 377 GLACEGIRPVVAIYSTFLQRAYDQIIHDVALQKLPVTFALDRGGLVGADGKTHQGAFDLA 436
Query: 291 FMACLPNMVVM 301
++ C+P +VVM
Sbjct: 437 YLRCVPGLVVM 447
>gi|82701370|ref|YP_410936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosospira multiformis
ATCC 25196]
gi|118595593|sp|Q2YCH7.1|DXS_NITMU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|82409435|gb|ABB73544.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosospira multiformis
ATCC 25196]
Length = 614
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 141/355 (39%), Positives = 186/355 (52%), Gaps = 82/355 (23%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +DAFG HSSTSISA L GMAV GK V++VI +GA A M++
Sbjct: 106 ESEYDAFGTAHSSTSISAAL----------GMAVASQWEGKKRSVVAVIGDGAMSAGMAF 155
Query: 71 EAINNAGV----------------------LNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNAG LN L RL S QF + A ++
Sbjct: 156 EALNNAGAMDTNLLVILNDNDMSISRPVGALNNYLARLMSG-QFYATARRA-----GEKM 209
Query: 109 FGGQMHEIDAFSREIE----AGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDP 164
G H ++ R E + + FE+ G YIGP+DGH+L+ L L ++ + P
Sbjct: 210 LGVVPHVLELAKRAEEHVKGMVTPSTLFEEFGFNYIGPIDGHDLDVLVSTLNNIRNLRGP 269
Query: 165 GAVLIHVITEK----------------------EKAMLP---LKLQQTRLF----CKI-- 193
+HV+T K + ++P +K T++F C +
Sbjct: 270 Q--FLHVVTRKGAGYKAAEDDPILYHGVTRFNPDAGIIPKASVKPSYTQVFGDWLCDMAA 327
Query: 194 LDNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSS 246
LD R+ G G+G+ F + R FDVGIAEQHAVTFAAGLA +GLKP AIYS+
Sbjct: 328 LDQRLVGITPAMREGSGMVRFSHEYADRYFDVGIAEQHAVTFAAGLACDGLKPVVAIYST 387
Query: 247 FLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
FLQR +DQ+ HDV +Q LPV FAIDRAGLVGADGPTH G+FD T++ C+PN+ VM
Sbjct: 388 FLQRAYDQLIHDVAIQNLPVVFAIDRAGLVGADGPTHAGSFDLTYLRCIPNITVM 442
>gi|337278945|ref|YP_004618416.1| 1-deoxy-D-xylulose-5-phosphate pyruvate-lyase [Ramlibacter
tataouinensis TTB310]
gi|334730021|gb|AEG92397.1| 1-deoxy-D-xylulose-5-phosphate pyruvate-lyase (carboxylating)
[Ramlibacter tataouinensis TTB310]
Length = 628
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 188/370 (50%), Gaps = 86/370 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +DAFG HSSTSISA L GMAV G++
Sbjct: 89 MGTLRQLGGLAGFPLRTESEYDAFGTAHSSTSISAAL----------GMAVAAHRQGEDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
+++I +GA A M++EA+NNAGV LN+ L +L S
Sbjct: 139 KAVAIIGDGAMSAGMAFEALNNAGVAECNLLVILNDNDMSISPPVGALNRYLAQLMSG-- 196
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS--RACFFEDLGLYYIGPVDGHNLE 149
Q A S K + ++ E G A FE G YIGP+DGH+L
Sbjct: 197 --QFYAAAKSVGKNVLKVAPPLFQLAKRFEEHAKGMVVPATLFEQFGFNYIGPIDGHDLH 254
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAM--------------------------LPLK 183
L L+ +K + P +HV+T+K + P K
Sbjct: 255 SLIPTLENLKHLKGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLVQPATPPK 312
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T++F + L D R+ G G+GL F+K FP R FDVGIAEQHAVTFAA
Sbjct: 313 TTFTQVFGQWLCDMATQDARLVGITPAMREGSGLVEFEKRFPERYFDVGIAEQHAVTFAA 372
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA EGLKP AIYS+FLQR +DQ+ HDV LQKLPV A+DRAG+VGADGPTH GA+D
Sbjct: 373 GLACEGLKPVVAIYSTFLQRAYDQLIHDVALQKLPVVLALDRAGIVGADGPTHAGAYDIP 432
Query: 291 FMACLPNMVV 300
++ C+PN+ +
Sbjct: 433 YLRCIPNVSI 442
>gi|415925489|ref|ZP_11554935.1| 1-deoxy-D-xylulose 5-phosphate synthase, partial [Herbaspirillum
frisingense GSF30]
gi|407760265|gb|EKF69614.1| 1-deoxy-D-xylulose 5-phosphate synthase, partial [Herbaspirillum
frisingense GSF30]
Length = 477
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 191/371 (51%), Gaps = 88/371 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+ G +
Sbjct: 87 MGSLRQQEGISGFPRRIESEYDTFGTAHSSTSISAAL----------GMALAAKTQGSDR 136
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
H I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 137 HAIAVIGDGAMTAGMAFEALNNAGVHEDINLLVILNDNDMSISPPVGALNRYLARLMSGK 196
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS--RACFFEDLGLYYIGPVDGHNL 148
+ A + K G + E+ E G A FE+ G YIGP+DGH+L
Sbjct: 197 FY------AKARDVGKSVLPGPVLELAKRLEEHAKGMVVPATMFEEFGFNYIGPIDGHDL 250
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEK----------------------EKAMLPL---K 183
+ L L+ +K + P +HV+T K + + P K
Sbjct: 251 DSLVPTLQNLKHLKGP--QFLHVVTRKGQGYKLAEADPVLYHGPGKFNPSEGIKPSAGGK 308
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F + L D+++ G G+G+ F+K FP R +DVGIAEQHAVTFAA
Sbjct: 309 LTYTQVFGEWLCDMGAADDKLVGITPAMREGSGMVAFEKKFPERYYDVGIAEQHAVTFAA 368
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG+KP AIYS+FLQR +DQ+ HDV LQ L V FA+DRAGLVGADG TH G +D
Sbjct: 369 GMACEGMKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDLA 428
Query: 291 FMACLPNMVVM 301
F+ C+PNMVVM
Sbjct: 429 FLRCIPNMVVM 439
>gi|195953435|ref|YP_002121725.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hydrogenobaculum sp.
Y04AAS1]
gi|195933047|gb|ACG57747.1| deoxyxylulose-5-phosphate synthase [Hydrogenobaculum sp. Y04AAS1]
Length = 627
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 142/365 (38%), Positives = 186/365 (50%), Gaps = 79/365 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+R+ G+ E+++DAFG GHSSTSISA G V +DLL +++V
Sbjct: 90 TLRKKGGISGFLRIEESLYDAFGAGHSSTSISAA----------EGFRVAKDLLKDDSYV 139
Query: 56 ISVIVEGATIARMSYEAINNAGVL--NKALKRLHSNPQFRQLCQEAFSS----------- 102
++VI +GA A M YEA+NN G L NK + L+ N A S+
Sbjct: 140 VAVIGDGAMTAGMVYEALNNIGHLHHNKLIIILNDNEMSISKNIGAISTYLNKLITGRHI 199
Query: 103 KDKKQKFGGQMHEIDAFSREIEA---------GSRACFFEDLGLYYIGPVDGHNLEDLAY 153
+D + K + + R + FE+LGL YIG +DGHN E L
Sbjct: 200 QDTRNKIKNILDKAGFVPRRFAKLTEEFVKGFATPGILFEELGLNYIGIIDGHNEEALET 259
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL------------------------ 189
LK K+I P VLIH++T+K K P + +
Sbjct: 260 TLKNAKSIDGP--VLIHIVTKKGKGYEPAEENPVKWHGVAPYKKESGEASKMSGGKSWTQ 317
Query: 190 -----FCKI--LDNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAE 235
KI LD R M G+GL F K +P R FDVGIAEQHA TF+AGLAA
Sbjct: 318 CFSEALLKIAELDERVVAITPAMKEGSGLVDFAKKYPDRFFDVGIAEQHAATFSAGLAAG 377
Query: 236 GLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACL 295
GLKP A YS+F+QR +DQ+ HD+ LQ L V FA+DRAGLVG DGPTH G FD +F+ C+
Sbjct: 378 GLKPVLAYYSTFMQRAYDQIIHDIALQNLNVVFAVDRAGLVGEDGPTHHGVFDISFLNCI 437
Query: 296 PNMVV 300
PN+V+
Sbjct: 438 PNIVI 442
>gi|347532046|ref|YP_004838809.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseburia hominis A2-183]
gi|345502194|gb|AEN96877.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseburia hominis A2-183]
Length = 633
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 138/352 (39%), Positives = 182/352 (51%), Gaps = 80/352 (22%)
Query: 15 DAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSYEAIN 74
D F GHSSTSISAGL G A R++ G+N V+SVI +GA M++EA+N
Sbjct: 108 DCFDTGHSSTSISAGL----------GYAHAREITGENYKVVSVIGDGALTGGMAFEALN 157
Query: 75 NAGVLNKA----------------------LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
NA LN L + +R L +S +K +G +
Sbjct: 158 NAAQLNSNFIIVLNDNNMSISENVGGLSTYLAGFRTADAYRDLKLGVMNSLNKIPVYGDK 217
Query: 113 MHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAV 167
M E R ++G + F FE+LG+ Y+GPVDG +++ + +L++ + P V
Sbjct: 218 MVE---RIRRTKSGIKQLFIPGMLFEELGIIYLGPVDGGDIKGILKLLQEASRVDGP--V 272
Query: 168 LIHVITEKEKAMLP-------------------------LKLQQTRLFCKIL------DN 196
L+HVIT K P +K T +F ++ D
Sbjct: 273 LVHVITHKGTGYAPAERHPARFHGTEPFDIETGLPKHPRVKANYTDVFSTVMRKLGDRDE 332
Query: 197 R-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQ 249
R M GTGL F FP R FDVGIAEQHAVTFAAGLAA GLKP A+YSSFLQ
Sbjct: 333 RVVAITAAMTDGTGLKRFHNMFPERFFDVGIAEQHAVTFAAGLAAGGLKPIFAVYSSFLQ 392
Query: 250 RCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
R +DQ+ HDV +Q LPV FAIDRAGLVG+DG TH G FD ++++ +PNM +M
Sbjct: 393 RAYDQILHDVCIQNLPVVFAIDRAGLVGSDGETHQGIFDISYLSTIPNMTIM 444
>gi|220934011|ref|YP_002512910.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|254782086|sp|B8GN62.1|DXS_THISH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|219995321|gb|ACL71923.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 640
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 192/367 (52%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +R+ GL E+ +D FGVGHSSTSISA L GMA+ LG++
Sbjct: 94 MPGLRKKGGLAGFPKRAESPYDTFGVGHSSTSISAAL----------GMALAARQLGEDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSNPQF------RQLCQEA 99
H +++I +GA A M++EA+N+AG VLN + N R L +
Sbjct: 144 HAVAIIGDGAMTAGMAFEALNHAGDQKANLLVVLNDNEMSISPNVGAMNNYLARLLSGKV 203
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
+S+ ++ ++ M + F R E + FE+LG Y GP+DGH+L L
Sbjct: 204 YSTVREGSKRVLDHMPPMREFMRRAEEHMKGMIVPGTLFEELGFNYYGPIDGHDLPSLVK 263
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------------------T 187
LK ++A+P P L+HV+T K P + T
Sbjct: 264 TLKNLRALPGP--RLLHVVTRKGHGYAPAEQDPCGYHGVGQFDPSQGLAAGKTPSSPSYT 321
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F + L D R+ G G+GL F + FP R DVGIAEQHA+T AAG+A
Sbjct: 322 QVFGQWLCDMAEADPRLVGITPAMREGSGLVEFSQRFPERYHDVGIAEQHALTVAAGMAC 381
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
+GLKP AIYS+FLQR +DQ+ HD+ +Q LPV AIDRAG+VG DGPTH G+FD +++ C
Sbjct: 382 DGLKPVVAIYSTFLQRAYDQLIHDIAIQNLPVLLAIDRAGVVGPDGPTHAGSFDLSYLRC 441
Query: 295 LPNMVVM 301
+PN+ VM
Sbjct: 442 VPNLTVM 448
>gi|387771793|ref|ZP_10127950.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus
parahaemolyticus HK385]
gi|386908178|gb|EIJ72876.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus
parahaemolyticus HK385]
Length = 617
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 183/368 (49%), Gaps = 79/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
++TIRQ G+ E+++D VGHSSTSISAGL G+AV +
Sbjct: 92 IKTIRQKDGIHPFPWREESIYDVLSVGHSSTSISAGL----------GIAVAAEKENAGR 141
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
+ VI +GA A M++EA+N N G LN L R+ S
Sbjct: 142 KTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSISENVGALNNHLARIFSGSL 201
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDL 151
+ + + DK M + + + + + FE+LG YIGP+DGHN++DL
Sbjct: 202 YTTMRDGSKKILDKVPTIKNFMKKSEEHMKGVIFSPESTLFEELGFNYIGPIDGHNIDDL 261
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAMLPL------------------KLQQTR----- 188
L+ ++ + P +H+ T+K K P KL +T+
Sbjct: 262 VKTLENMRDLKGPQ--FLHIRTKKGKGYEPAENDPIGFHGVPKFDPESGKLPKTKTIPTY 319
Query: 189 ------LFCKILDNR---------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
C+I + M G+G+ F K FP + FDV IAEQHAVTFA GLA
Sbjct: 320 SDIFGNWLCEIAEQDPKLIGITPAMREGSGMVEFSKRFPEQYFDVAIAEQHAVTFATGLA 379
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
G KP AIYSSFLQR +DQ+ HDV +Q LPV FAIDRAG+VGADG TH GAFD +FM
Sbjct: 380 IAGFKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIFAIDRAGIVGADGQTHQGAFDLSFMR 439
Query: 294 CLPNMVVM 301
C+PNM +M
Sbjct: 440 CIPNMTIM 447
>gi|300313125|ref|YP_003777217.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum seropedicae
SmR1]
gi|300075910|gb|ADJ65309.1| 1-deoxy-D-xylulose 5-phosphate synthase protein [Herbaspirillum
seropedicae SmR1]
Length = 621
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 191/371 (51%), Gaps = 88/371 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ G +
Sbjct: 87 MDTLRQQEGISGFPRRIESQYDTFGTAHSSTSISAAL----------GMALAARTQGSDR 136
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
H I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 137 HAIAVIGDGAMTAGMAFEALNNAGVHEDVKLLVILNDNDMSISPPVGALNRYLARLMSGK 196
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS--RACFFEDLGLYYIGPVDGHNL 148
+ A + K G + E+ E G A FE+ G YIGP+DGH+L
Sbjct: 197 FY------ARARDVGKSVLPGPVLELAKRLEEHAKGMVVPATMFEEFGFNYIGPIDGHDL 250
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEK----------------------EKAMLPL---K 183
+ L L+ +K + P +HV+T+K + + P K
Sbjct: 251 DSLVPTLQNLKHLKGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPSEGIKPSAGGK 308
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F L D+++ G G+G+ F+K FP R +DVGIAEQHAVTFAA
Sbjct: 309 LTYTKVFGDWLCDMAAADDKLVGITPAMREGSGMVDFEKKFPNRYYDVGIAEQHAVTFAA 368
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG+KP AIYS+FLQR +DQ+ HDV LQ L V FA+DRAGLVGADG TH G +D
Sbjct: 369 GMACEGMKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDLA 428
Query: 291 FMACLPNMVVM 301
F+ C+PNMVVM
Sbjct: 429 FLRCIPNMVVM 439
>gi|428211174|ref|YP_007084318.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria acuminata PCC
6304]
gi|427999555|gb|AFY80398.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria acuminata PCC
6304]
Length = 635
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 187/374 (50%), Gaps = 88/374 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+ D FG GH+STSISAGL GMA+ RD+ G+ V
Sbjct: 90 TLRQKNGVAGYLKRSESKFDHFGAGHASTSISAGL----------GMALARDMKGEKFKV 139
Query: 56 ISVIVEGATIARMSYEAINNAG---------VLN--------------KALKRLHSNPQF 92
+SVI +GA M+ EAIN+AG VLN + L ++ +P
Sbjct: 140 VSVIGDGALTGGMALEAINHAGHLPNTNLMVVLNDNEMSISPNVGAIPRYLNKMRLSPPV 199
Query: 93 RQLCQEAFSSKDKKQKFGGQ-----MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
Q ++ + K F G+ M I + + FE+LG YIGP+DGHN
Sbjct: 200 -QFLKDNLEEQFKHLPFVGETFTPEMQRIKEGMKRLAVPKVGAVFEELGFTYIGPIDGHN 258
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEK-------------AMLPLKL---------- 184
LE+L Q +P P VL+HV T K K A P L
Sbjct: 259 LEELITTFNQAHQMPGP--VLVHVATVKGKGYAIAEKDQVGYHAQNPFNLATGKAIPSNK 316
Query: 185 ----QQTRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
+++F + L M GTGL+ Q P + DVGIAEQHA T
Sbjct: 317 PKPPSYSKVFAETLIKLAEENPKIVGITAAMATGTGLDKLQAKLPNQYIDVGIAEQHAAT 376
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
AAGLA EG++P CAIYS+FLQR +DQ+ HD+ +QKLPV F +DRAG+VGADGPTH G +
Sbjct: 377 LAAGLACEGIRPVCAIYSTFLQRAYDQIIHDICIQKLPVFFCLDRAGIVGADGPTHQGLY 436
Query: 288 DTTFMACLPNMVVM 301
D + C+PN+V+M
Sbjct: 437 DIASLRCIPNLVLM 450
>gi|121610224|ref|YP_998031.1| 1-deoxy-D-xylulose-5-phosphate synthase [Verminephrobacter eiseniae
EF01-2]
gi|166201545|sp|A1WN06.1|DXS_VEREI RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|121554864|gb|ABM59013.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Verminephrobacter eiseniae
EF01-2]
Length = 631
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 192/364 (52%), Gaps = 78/364 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+V+D FG HSSTSISA L GMA+ G++
Sbjct: 93 MHTLRQQGGISGFPQRGESVYDTFGTAHSSTSISAAL----------GMALAAKRKGESR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQ------------FRQLCQEAF 100
H +++I +GA A M++EA+NNAGV + L L+ N QL F
Sbjct: 143 HTVAIIGDGAMSAGMAFEALNNAGVADCNLLVVLNDNDMSISPPVGALNRYLAQLMSGRF 202
Query: 101 --SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAY 153
++K+ + M + F++ E ++ A FE G YIGP+DGH+L+ L
Sbjct: 203 YAAAKNMGKTVLRPMPPLLEFAKRFEQQAKGLVVPATLFEKFGFNYIGPIDGHDLDSLIP 262
Query: 154 VLKQVKAIPDPGAVLIHVITEKE--------------------------KAMLPLKLQQT 187
L +K + P +HV+T+K K+ +L T
Sbjct: 263 TLDNIKGLQGP--QFLHVVTKKGQGYKLAEADPVAYHGPARFDPAVGLVKSSTAPRLTFT 320
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F + L D R+ G G+G+ F++ FP R +DVGIAEQHAVTFAAG+A
Sbjct: 321 QVFGQWLCDMAAHDERLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQHAVTFAAGMAC 380
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EG KP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+D F+ C
Sbjct: 381 EGAKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAFLRC 440
Query: 295 LPNM 298
+PNM
Sbjct: 441 IPNM 444
>gi|332307432|ref|YP_004435283.1| deoxyxylulose-5-phosphate synthase [Glaciecola sp. 4H-3-7+YE-5]
gi|332174761|gb|AEE24015.1| deoxyxylulose-5-phosphate synthase [Glaciecola sp. 4H-3-7+YE-5]
Length = 621
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 189/367 (51%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D F VGHSSTSISA VGMAV +
Sbjct: 95 MPTIRQKNGLHPFPWPNESDYDTFAVGHSSTSISAA----------VGMAVAAEKEALGR 144
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
V++VI +GA A M++EA+N+ G ++K + + ++ + R L
Sbjct: 145 KVVAVIGDGAMTAGMAFEALNHGGDIDKDMLVILNDNEMSISENVGALNSHLARLLTGNF 204
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
F+S +D +K + I F+ E + FE+LG YIGP+DGH++ +
Sbjct: 205 FNSIRDGGKKLLSSVPPIKEFASRAEEHIKGMVVPGTIFEELGFNYIGPIDGHDVNGVVD 264
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQT--------------------- 187
LK ++ I GA ++HV+T+K K P+K
Sbjct: 265 TLKNMRNIK--GAQILHVVTKKGKGYELAEKDPIKFHAVPKFNPSADGLPKAAPSDPTFS 322
Query: 188 ----RLFCKI---------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
R C + + M G+G+ F + FP + FDV IAEQHAVTFAAGLA
Sbjct: 323 NIFGRWLCDMATQDPNLMAVTPAMREGSGMVEFSQKFPEQYFDVAIAEQHAVTFAAGLAK 382
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EG AIYS+FLQR +DQV HDV LQ+LPV FAIDRAGLVGADGPTH GAFD F+ C
Sbjct: 383 EGQNAVVAIYSTFLQRAYDQVIHDVALQELPVLFAIDRAGLVGADGPTHQGAFDIPFLRC 442
Query: 295 LPNMVVM 301
+PNMV+M
Sbjct: 443 IPNMVIM 449
>gi|410647326|ref|ZP_11357761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Glaciecola agarilytica
NO2]
gi|410133181|dbj|GAC06160.1| 1-deoxy-D-xylulose-5-phosphate synthase [Glaciecola agarilytica
NO2]
Length = 621
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 189/367 (51%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D F VGHSSTSISA VGMAV +
Sbjct: 95 MPTIRQKNGLHPFPWPNESDYDTFAVGHSSTSISAA----------VGMAVAAEKEALGR 144
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
V++VI +GA A M++EA+N+ G ++K + + ++ + R L
Sbjct: 145 KVVAVIGDGAMTAGMAFEALNHGGDIDKDMLVILNDNEMSISENVGALNSHLARLLTGNF 204
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
F+S +D +K + I F+ E + FE+LG YIGP+DGH++ +
Sbjct: 205 FNSIRDGGKKLLSSVPPIKEFASRAEEHIKGMVVPGTIFEELGFNYIGPIDGHDVNGVVD 264
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQT--------------------- 187
LK ++ I GA ++HV+T+K K P+K
Sbjct: 265 TLKNMRNIK--GAQILHVVTKKGKGYELAEKDPIKFHAVPKFNPSADGLPKAAPSDPTFS 322
Query: 188 ----RLFCKI---------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
R C + + M G+G+ F + FP + FDV IAEQHAVTFAAGLA
Sbjct: 323 NIFGRWLCDMATQDPNLMAVTPAMREGSGMVEFSQKFPEQYFDVAIAEQHAVTFAAGLAK 382
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EG AIYS+FLQR +DQV HDV LQ+LPV FAIDRAGLVGADGPTH GAFD F+ C
Sbjct: 383 EGQNAVVAIYSTFLQRAYDQVIHDVALQELPVLFAIDRAGLVGADGPTHQGAFDIPFLRC 442
Query: 295 LPNMVVM 301
+PNMV+M
Sbjct: 443 IPNMVIM 449
>gi|336434224|ref|ZP_08614024.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium
2_1_58FAA]
gi|336014267|gb|EGN44123.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lachnospiraceae bacterium
2_1_58FAA]
Length = 624
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 139/349 (39%), Positives = 183/349 (52%), Gaps = 74/349 (21%)
Query: 15 DAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSYEAIN 74
DAF GHSSTSISAGL G RD+ G+ + VIS+I +GA M+YEA+N
Sbjct: 108 DAFDTGHSSTSISAGL----------GYVAARDIKGEEHSVISIIGDGAMTGGMAYEALN 157
Query: 75 NAG--------VLNKALKRLHSN--PQFRQL----CQEAFSS-----KDKKQKFGGQMHE 115
NA VLN + N R L EA++ +D K Q +
Sbjct: 158 NASRLKSNFIIVLNDNNMSISENVGGMSRYLNGLRTAEAYTGLKKGVEDTLMKIPVQGEK 217
Query: 116 IDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIH 170
I ++ ++G + FFED+G+ Y+GPVDGH++ L ++ K + AVL+H
Sbjct: 218 ILYQMKKTKSGLKQLFVPGMFFEDMGITYLGPVDGHDIRKLYKTFQEAKRVDH--AVLVH 275
Query: 171 VITEKEKAMLPLKLQQTR-----------------------------LFCKI-------- 193
V+T+K K +P + +R +FC I
Sbjct: 276 VLTKKGKGYVPAEENPSRFHGIVPFDIETGEAKEKSSKDSYTDIFSKVFCDIAKQNDAVV 335
Query: 194 -LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCF 252
+ M GTGL F + FP R FDVGIAE+HA+TFAAGLAA GLKP A+YSSFLQR F
Sbjct: 336 GITAAMADGTGLARFARMFPDRFFDVGIAEEHALTFAAGLAAGGLKPVVAVYSSFLQRAF 395
Query: 253 DQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DQ HDV LQ LPV A+DRAGLVG+DG TH G FD +F+ +PNM ++
Sbjct: 396 DQTIHDVCLQNLPVMIAVDRAGLVGSDGETHQGLFDLSFLNMIPNMTIL 444
>gi|393762561|ref|ZP_10351188.1| deoxyxylulose-5-phosphate synthase [Alishewanella agri BL06]
gi|392606796|gb|EIW89680.1| deoxyxylulose-5-phosphate synthase [Alishewanella agri BL06]
Length = 622
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 194/370 (52%), Gaps = 84/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D VGHSSTSISA L GMA+
Sbjct: 95 MHTIRQKDGLHPFPYREESEYDVLSVGHSSTSISAAL----------GMAIAARQAKSQR 144
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF 100
V++VI +GA A M++EA+N+AG +LN + N F ++ +F
Sbjct: 145 KVVAVIGDGAITAGMAFEALNHAGEVKPDMLVILNDNEMSISENVGALNQYFARILSGSF 204
Query: 101 SSKDKKQKFGGQ--------MHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLED 150
+ ++ GG+ +HE+ + + E G + FFE+LG YIGP+DGH++
Sbjct: 205 YTSLRE---GGKKILRGVPPLHELASRAEEHFKGMVTPGTFFEELGFNYIGPIDGHDVLG 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPL--------------------------KL 184
L ++ ++++ P L+H++T+K K P K
Sbjct: 262 LVDTIRNMRSLKGPQ--LLHIVTKKGKGYAPAEADPIGYHAVSKFDPAQHKQPEKKAGKP 319
Query: 185 QQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+ +F + + D R+ G G+ L F K FP R FDV IAEQHAVT AAG
Sbjct: 320 SFSNIFGQWICDMAEQDERLQGITPAMREGSDLVAFSKRFPKRYFDVAIAEQHAVTLAAG 379
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EGLKP AIYSSFLQR +DQ+ HDV LQ L V FAIDRAG+VGADGPTH GAFD +F
Sbjct: 380 LAIEGLKPVVAIYSSFLQRGYDQLIHDVALQNLDVLFAIDRAGIVGADGPTHQGAFDISF 439
Query: 292 MACLPNMVVM 301
M C+PN+VVM
Sbjct: 440 MRCIPNLVVM 449
>gi|254490450|ref|ZP_05103636.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophaga thiooxidans
DMS010]
gi|224464194|gb|EEF80457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophaga thiooxydans
DMS010]
Length = 466
Score = 213 bits (542), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 191/359 (53%), Gaps = 70/359 (19%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ GL E+ +D FGVGHSSTSISA L GMA+
Sbjct: 89 MNSMRQPGGLSGFPKRGESEYDTFGVGHSSTSISAAL----------GMALAAQANDDPR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQFR-------------QLCQEAF 100
H +++I +GA A +YEA+ +AG L+ L + ++ + +L F
Sbjct: 139 HAVAIIGDGALTAGQAYEALAHAGDLSANLLVILNDNEMSISKNVGGMANYLAKLLSGNF 198
Query: 101 --SSKDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
S+++ +K ++ +R E + FE++G YIGP+DGH+++ L
Sbjct: 199 YTSAREGSKKVLEKIPPAWEIARRAEEHMKGMVVPGTLFEEMGFNYIGPIDGHDIDTLIA 258
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------TRLFCKIL- 194
L ++ P +H++T+K K P + Q T++F + L
Sbjct: 259 TLSNLRKRKGP--QFLHIVTKKGKGFEPAEKQPCKYHGVSPANSKSSGPSYTQVFGRWLC 316
Query: 195 -----DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCA 242
D + G G+GLN F + FP R FDVGIAEQH+VT AAGLA EG KP A
Sbjct: 317 DMAKQDKDLIGITPAMCEGSGLNRFAEDFPDRYFDVGIAEQHSVTLAAGLACEGKKPVVA 376
Query: 243 IYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
IYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADGPTH G+FD +++ C+PNMVVM
Sbjct: 377 IYSTFLQRAYDQLIHDVALQNLPVMFAIDRAGLVGADGPTHAGSFDLSYLRCIPNMVVM 435
>gi|395208773|ref|ZP_10397938.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oribacterium sp. ACB8]
gi|394705374|gb|EJF12900.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oribacterium sp. ACB8]
Length = 650
Score = 213 bits (542), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 186/356 (52%), Gaps = 80/356 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D F GHSSTSISA L G+A GRD+LG++ V++VI +GA M+Y
Sbjct: 104 ESPYDCFNTGHSSTSISAAL----------GIAEGRDILGEDYTVLAVIGDGALTGGMAY 153
Query: 71 EAINNAGVLNKA----------------------LKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNA + K L + SN + + + K
Sbjct: 154 EALNNASKMKKNFIIILNDNEMSIAKNVGGMSTYLNGIRSNKGYTRFKENLAFGLGKIPV 213
Query: 109 FGGQMHE-----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
G + E ++ + + G FE++GL Y+GPVDGHNL L V+ + K I
Sbjct: 214 VGNHLVERLKNTKNSIKQLLVPG---MLFENMGLTYLGPVDGHNLHALEQVIHEAKRIDH 270
Query: 164 PGAVLIHVITEKEKAMLPLKLQQ-------------------------TRLFCKIL---- 194
AVL+HV+T+K K P + T +F + L
Sbjct: 271 --AVLVHVVTKKGKGYAPAEKNPSVFHGVGPFDIATGKRKKESSEKSYTDIFSESLIKEG 328
Query: 195 -DNR--------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS 245
+N+ M GTGL+ F+K FP R FDVGIAE HAVT AAGLA+ GLKP A+YS
Sbjct: 329 KENKKIVAITAAMPDGTGLDKFEKLFPKRFFDVGIAEAHAVTSAAGLASAGLKPVFAVYS 388
Query: 246 SFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
SFLQR +DQ+ HD+ LQKLPV FAIDRAGLVGADG TH G FD +++ +PNM VM
Sbjct: 389 SFLQRAYDQLVHDICLQKLPVVFAIDRAGLVGADGETHQGIFDISYLRSIPNMTVM 444
>gi|386389470|ref|ZP_10074284.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus
paraphrohaemolyticus HK411]
gi|385695240|gb|EIG25802.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus
paraphrohaemolyticus HK411]
Length = 617
Score = 213 bits (542), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 183/368 (49%), Gaps = 79/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
++TIRQ G+ E+V+D VGHSSTSISAGL G+AV +
Sbjct: 92 IKTIRQKDGIHPFPWREESVYDVLSVGHSSTSISAGL----------GIAVAAEKENVGR 141
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
+ VI +GA A M++EA+N N G LN L R+ S
Sbjct: 142 KTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSISENVGALNNHLARIFSGSL 201
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDL 151
+ + + DK M + + + + + FE+LG YIGP+DGHN++DL
Sbjct: 202 YTTMRDGSKKILDKVPTIKNFMKKSEEHMKGVIFSPESTLFEELGFNYIGPIDGHNIDDL 261
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAMLPL------------------KLQQTR----- 188
L+ ++ + P +H+ T+K K P KL +T+
Sbjct: 262 VKTLENMRDLKGPQ--FLHIRTKKGKGYQPAENDPIGFHGVPKFDPESGKLPKTKTIPTY 319
Query: 189 ------LFCKI---------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
C+I + M G+G+ F K FP + FDV IAEQHAVTFA GLA
Sbjct: 320 SDIFGNWLCEIAIQDPKLIGITPAMREGSGMVEFSKRFPEQYFDVAIAEQHAVTFATGLA 379
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
G KP AIYSSFLQR +DQ+ HDV +Q LPV FAIDRAG+VGADG TH GAFD +FM
Sbjct: 380 IAGFKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIFAIDRAGIVGADGQTHQGAFDLSFMR 439
Query: 294 CLPNMVVM 301
C+PNM +M
Sbjct: 440 CIPNMTIM 447
>gi|374301292|ref|YP_005052931.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfovibrio africanus
str. Walvis Bay]
gi|332554228|gb|EGJ51272.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfovibrio africanus
str. Walvis Bay]
Length = 666
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 135/374 (36%), Positives = 189/374 (50%), Gaps = 90/374 (24%)
Query: 3 TIRQTCGLENV--------HDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
T+RQ G+ +D FGVGHSSTSISA L GMA+ RDL GK ++
Sbjct: 124 TLRQLGGISGFPRIAESPEYDHFGVGHSSTSISAAL----------GMALARDLGGKKHN 173
Query: 55 VISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQF 92
V+SVI +G+ A ++YE +N N G L+ L R S P
Sbjct: 174 VLSVIGDGSMTAGLAYEGLNQAGGMGLDMVVVLNDNEMSISKNVGALSLFLSRKLSGPLL 233
Query: 93 RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGHN 147
+L +E + G ++ ++R E + F F+ G Y+GP++GH+
Sbjct: 234 TKLKREVEGFLKSVPRIG---EDLLKYARRSEDSFKGLFTPGMLFQSFGFNYLGPINGHD 290
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQT-------------------- 187
LE+L + +QV+ + P +L+HV+T+K K P + T
Sbjct: 291 LEELIEIFEQVRNLKGP--ILVHVLTKKGKGYAPAEKNPTYFHGVGCFEPETGQALKYGN 348
Query: 188 -----------RLFCKI---------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
+ C++ + M GTGL F++ FP R DVGI EQHAVT
Sbjct: 349 CSYPSFTEVFGQTLCELARQDEKIIAITAAMPEGTGLTRFREEFPSRFVDVGICEQHAVT 408
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA++G +P AIYS+FLQR +DQ+ HDV LQ LPV F +DR GLVG DGPTH G F
Sbjct: 409 FAAGLASQGFRPVVAIYSTFLQRSYDQIVHDVCLQNLPVSFFLDRGGLVGEDGPTHHGVF 468
Query: 288 DTTFMACLPNMVVM 301
D +F+ +PN+V+M
Sbjct: 469 DLSFLRHIPNLVIM 482
>gi|399018342|ref|ZP_10720522.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum sp. CF444]
gi|398101587|gb|EJL91799.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum sp. CF444]
Length = 620
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 189/371 (50%), Gaps = 88/371 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ G++
Sbjct: 86 MSTLRQFDGISGFPRRAESEYDTFGTAHSSTSISAAL----------GMALAAKTKGEDR 135
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
H I+VI +GA A M++EA+NNAG+ LN+ L RL S
Sbjct: 136 HAIAVIGDGAMTAGMAFEAMNNAGICEDVNLLVILNDNDMSISPPVGALNRYLARLMSG- 194
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS--RACFFEDLGLYYIGPVDGHNL 148
QF A + K M E+ E G A FE+ G YIGP+DGH+L
Sbjct: 195 QFY-----AKAKNVGKSMLPAPMLELAKRLEEHAKGMIVPATMFEEFGFNYIGPIDGHDL 249
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKE-------------------------KAMLPLK 183
+ L L+ +K + P +HV+T+K K K
Sbjct: 250 DSLIPTLQNLKNLKGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAAASK 307
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F + L D + G G+G+ F++ FP R +DVGIAEQHAVTFAA
Sbjct: 308 LTYTQVFGEWLCDMAAQDKTLVGITPAMREGSGMVKFEQKFPDRYYDVGIAEQHAVTFAA 367
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EGLKP AIYS+FLQR +DQ+ HDV LQ L V FA+DRAGLVGADG TH G +D
Sbjct: 368 GMACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDLA 427
Query: 291 FMACLPNMVVM 301
F+ C+PNMVVM
Sbjct: 428 FLRCIPNMVVM 438
>gi|403745749|ref|ZP_10954497.1| deoxyxylulose-5-phosphate synthase [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121093|gb|EJY55417.1| deoxyxylulose-5-phosphate synthase [Alicyclobacillus hesperidum
URH17-3-68]
Length = 631
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 184/363 (50%), Gaps = 78/363 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+R+ GL E+ HD FG GHSSTSISA VGMAV RDL +N+HV
Sbjct: 92 TLRKLGGLAGFLKRSESPHDPFGAGHSSTSISAA----------VGMAVARDLRRENHHV 141
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLN--------------KALKRLHSNPQFR 93
I+VI +GA M+ EA+N+AG VLN K L RL ++P +
Sbjct: 142 IAVIGDGALTGGMALEAMNHAGDLGLDLIVVLNDNEMSISNNVGAVSKYLTRLRTDPSYA 201
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF----FEDLGLYYIGPVDGHNLE 149
+ + + G ++ ++ R +A FE G YIGP+DGH+L
Sbjct: 202 KAKADIDHILKQLSGVGAKVTKV--LDRAKDAARHMLLPITPFEGFGFKYIGPIDGHDLP 259
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------TRLFC 191
L V ++ K I P VLIH +T+K K + + T +F
Sbjct: 260 QLISVFERAKEIRGP--VLIHTLTQKGKGYAQAESSEDKWHAWPSAVKGNQPPSYTNVFA 317
Query: 192 KIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLK 238
+ D R M G+GL FQK FP R FDVGIAEQHA TF AGLAA G +
Sbjct: 318 ATVAELARRDERIVVVTPAMLSGSGLTKFQKEFPTRTFDVGIAEQHAGTFCAGLAAAGKR 377
Query: 239 PFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNM 298
P A+YS+FLQR +DQ HD+ +Q LPV A+DRAG+VG DG TH G FD ++ +PNM
Sbjct: 378 PIFAVYSTFLQRAYDQTIHDICIQNLPVLLAVDRAGIVGPDGETHQGVFDVAYLRTVPNM 437
Query: 299 VVM 301
VM
Sbjct: 438 AVM 440
>gi|395005696|ref|ZP_10389565.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. CF316]
gi|394316252|gb|EJE52982.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. CF316]
Length = 627
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 191/364 (52%), Gaps = 78/364 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ + G+N
Sbjct: 93 MNTLRQMGGISGFPQRAESPYDTFGTAHSSTSISAAL----------GMALAAKVKGENR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHS-------------NPQFRQLCQEAF 100
H +++I +GA A M++EA+NN GV + L + + N QL F
Sbjct: 143 HAVAIIGDGAMTAGMAFEALNNGGVADANLLVVLNDNDMSISPPVGALNRYLAQLMSGQF 202
Query: 101 --SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAY 153
++K+ + + + ++ E ++ A FE G YIGP+DGH+L+ L
Sbjct: 203 YAAAKNVGKTVLRPVPPLLELAKRFEQQAKGMVVPATLFEKFGFNYIGPIDGHDLDSLIP 262
Query: 154 VLKQVKAIPDPGAVLIHVITEKE--------------------------KAMLPLKLQQT 187
L+ +K++ P +HV+T+K K K T
Sbjct: 263 TLENIKSLKGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLVKGTASPKQTFT 320
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F + L D R+ G G+G+ F+K FP R +DVGIAEQHAVTFAAG+A
Sbjct: 321 QVFGQWLCDMGAHDQRLVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAVTFAAGMAC 380
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+D F+ C
Sbjct: 381 EGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIPFVRC 440
Query: 295 LPNM 298
+PNM
Sbjct: 441 IPNM 444
>gi|217970188|ref|YP_002355422.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thauera sp. MZ1T]
gi|217507515|gb|ACK54526.1| deoxyxylulose-5-phosphate synthase [Thauera sp. MZ1T]
Length = 622
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 140/358 (39%), Positives = 185/358 (51%), Gaps = 86/358 (24%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D FG HSSTSISA L GMAV G++ H I+VI +GA A M++
Sbjct: 108 ESEYDTFGTAHSSTSISAAL----------GMAVAARARGEDRHAIAVIGDGAMSAGMAF 157
Query: 71 EAINNAG-----------------------VLNKALKRLHSNPQFRQLCQEAFSSKDKKQ 107
EA+NNAG L K L R+ S + +++ +
Sbjct: 158 EALNNAGDMENLNLLVILNDNEMSISPPVGALTKILARMMSGSTYN-------TARRVGE 210
Query: 108 KFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIP 162
K G + +R++E ++ FE+ G +Y GP+DGH+L+ L L+ ++ +
Sbjct: 211 KVLGVAPPVAELARKVEEYAKGMIGPGTLFEEFGFHYYGPIDGHDLDALIPTLQNLRKLK 270
Query: 163 DPGAVLIHVITEKEKAML-----PL---------------------KLQQTRLFCKIL-- 194
P +HVIT K + P+ KL T++F L
Sbjct: 271 GP--QFLHVITRKGQGYKLAEADPVLYHGVSKFDHTAGIQTGKGGGKLTYTQVFGDWLCD 328
Query: 195 ----DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAI 243
D R+ G G+GL F + FP R FDVGIAEQHAVTFAAGLA EG P AI
Sbjct: 329 MAKADPRIVGITPAMREGSGLVRFAQEFPERYFDVGIAEQHAVTFAAGLACEGFVPVVAI 388
Query: 244 YSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
YS+FLQR +DQ+ HDV LQ LPV FAIDR GLVGADG TH GAFD +F++C+PNMVVM
Sbjct: 389 YSTFLQRAYDQLIHDVALQNLPVVFAIDRGGLVGADGATHHGAFDLSFLSCVPNMVVM 446
>gi|409407600|ref|ZP_11256051.1| 1-deoxy-D-xylulose 5-phosphate synthase [Herbaspirillum sp. GW103]
gi|386433351|gb|EIJ46177.1| 1-deoxy-D-xylulose 5-phosphate synthase [Herbaspirillum sp. GW103]
Length = 621
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 191/371 (51%), Gaps = 88/371 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ G +
Sbjct: 87 MDTLRQQEGISGFPRRIESQYDTFGTAHSSTSISAAL----------GMALAARTQGSDR 136
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
H I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 137 HAIAVIGDGAMTAGMAFEALNNAGVHEDINLLVILNDNDMSISPPVGALNRYLARLMSGK 196
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS--RACFFEDLGLYYIGPVDGHNL 148
+ A + K G + E+ E G A FE+ G YIGP+DGH+L
Sbjct: 197 FY------AKARDVGKSVLPGPVLELAKRLEEHAKGMVVPATMFEEFGFNYIGPIDGHDL 250
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEK----------------------EKAMLPL---K 183
+ L L+ +K + P +HV+T+K + + P K
Sbjct: 251 DSLIPTLQNLKQLKGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFNPSEGIKPSAGGK 308
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F + L D ++ G G+G+ F+K FP R +DVGIAEQHAVTFAA
Sbjct: 309 LTYTQVFGQWLCDMAAADEKLVGITPAMREGSGMVGFEKTFPKRYYDVGIAEQHAVTFAA 368
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG+KP AIYS+FLQR +DQ+ HDV LQ L V FA+DRAGLVGADG TH G +D
Sbjct: 369 GMACEGMKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDLA 428
Query: 291 FMACLPNMVVM 301
F+ C+PNMVVM
Sbjct: 429 FLRCIPNMVVM 439
>gi|322418644|ref|YP_004197867.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. M18]
gi|320125031|gb|ADW12591.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. M18]
Length = 650
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 186/354 (52%), Gaps = 75/354 (21%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ HD F VGHSSTSISAG VG AV RDL + N V++VI +GA +++
Sbjct: 106 ESPHDCFDVGHSSTSISAG----------VGFAVARDLKKERNKVLAVIGDGAMTGGLAF 155
Query: 71 EAINNAGVLNKALKRLHSNPQ---------FRQLCQEAFSSK---DKKQKFGGQMHEIDA 118
E +N+AG LNK L + ++ + L +S+ K+ + +
Sbjct: 156 EGLNHAGELNKDLVVILNDNEMSISENVGALSNLLSRTITSEYVHRAKKDLEAFLEGVPM 215
Query: 119 FSREI-------EAGSRACF-----FEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGA 166
F R + E + F FE G YIGP+DGH++ L L+ VK D A
Sbjct: 216 FGRSVLKIAKRAEESLKTLFTPGMLFEAFGFEYIGPIDGHDIPKLLETLENVKRFDD--A 273
Query: 167 VLIHVITEKEKA-------------MLPLKLQQ-------------TRLFCKIL------ 194
VLIHV+T K K + P L+ T +F + +
Sbjct: 274 VLIHVLTRKGKGYPAAEANPSLFHGVGPFDLKTGKVHKGKGGAASYTGVFGETVKRLALE 333
Query: 195 DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSF 247
D R M GTGL F + FP R FDVGIAEQHAVTFAAGLAA+GL+P A+YSSF
Sbjct: 334 DERIVAITAAMPDGTGLTPFAREFPDRFFDVGIAEQHAVTFAAGLAAQGLRPVVALYSSF 393
Query: 248 LQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
LQR FDQ+ HDV LQ+LPV FAIDRAG+VG+DGPTH G FD ++ +P + VM
Sbjct: 394 LQRGFDQLCHDVCLQELPVVFAIDRAGVVGSDGPTHHGVFDLCYLRQIPGLTVM 447
>gi|193213893|ref|YP_001995092.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chloroherpeton thalassium
ATCC 35110]
gi|193087370|gb|ACF12645.1| deoxyxylulose-5-phosphate synthase [Chloroherpeton thalassium ATCC
35110]
Length = 647
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/358 (38%), Positives = 187/358 (52%), Gaps = 79/358 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +DAFGVGH+STSISA GMA RDL ++ V++VI +G+ M++
Sbjct: 119 ESCYDAFGVGHASTSISAA----------TGMAAARDLAHEDFKVVAVIGDGSMTGGMAF 168
Query: 71 EAINNAGVLNKAL------KRLHSNPQ---FRQLCQEAFSS-------KDKKQKFGGQMH 114
E +N+ G L + R+ +P R+ + ++ +D Q +
Sbjct: 169 EGMNHLGHLKTDVTVILNDNRMSIDPNVGGLREYLTDITTNFTYNKIRRDIWQTLSKFDN 228
Query: 115 EIDAFSRE----IEAGSRAC-----FFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPG 165
EI + +R IE G +A +FE LG Y GP+DGH++ LA VL +++ +P P
Sbjct: 229 EIGSTARRLVRGIEDGLKAALTPGSYFEALGFRYFGPIDGHDVGHLARVLTEIRGLPHPK 288
Query: 166 AVLIHVITEKEKAMLPLKLQQTRL------FCKIL------------------------- 194
L+H++T K K P + Q++ F K+
Sbjct: 289 --LLHIVTVKGKGFAPAEANQSKWHAQSGAFDKVTGVSLKKADPNAAPKYQDVFGDAITK 346
Query: 195 ----DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAI 243
D R M GT L + +P R FDVGIAE HAVTFAAG+A G KP CAI
Sbjct: 347 IAGKDQRVVGVTAAMPSGTSLKKLGEKYPERFFDVGIAEPHAVTFAAGMAVHGFKPVCAI 406
Query: 244 YSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
YS+FLQR +DQ+ HDV LQKL V FAIDRAGLVGADGPTH G FD +F+ +PNMVVM
Sbjct: 407 YSTFLQRAYDQIIHDVALQKLNVIFAIDRAGLVGADGPTHHGVFDLSFLRMIPNMVVM 464
>gi|225025166|ref|ZP_03714358.1| hypothetical protein EIKCOROL_02059 [Eikenella corrodens ATCC
23834]
gi|224942127|gb|EEG23336.1| hypothetical protein EIKCOROL_02059 [Eikenella corrodens ATCC
23834]
Length = 626
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 145/373 (38%), Positives = 196/373 (52%), Gaps = 85/373 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +D FGVGHSSTSI A L GMAV L G N
Sbjct: 91 MHTMRQYGGLAGFPKRSESEYDDFGVGHSSTSIGAAL----------GMAVADKLSGSLN 140
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN----PQFRQLCQ---- 97
++VI +GA A ++EA+NNAG +LN + N P++ Q
Sbjct: 141 RSVAVIGDGAMTAGQAFEALNNAGDMDTDLLVILNDNEMSISPNVGAFPKYLAGSQGKDW 200
Query: 98 ----EAFSSKDKK--QKFGGQMH---EIDAFSREIEAGSRA---CFFEDLGLYYIGPVDG 145
+ K +K K G +H +++ + + GSR F++ G Y GPVDG
Sbjct: 201 RDTLRSIKHKSEKVLDKLPGALHIAQKVEQRLKSVLDGSRIRPDSLFDNFGFTYTGPVDG 260
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML--------------------PLK-- 183
H++ L VLK++K P L+HV+T+K + P+
Sbjct: 261 HDVRQLVAVLKEMKQRKGP--QLLHVLTQKGQGYKLAENDPVGFHAVGKFNPDQGPVSGG 318
Query: 184 ---LQQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
L T++F + + ++ M G+GL F++ FP R FDVGIAEQHAVT
Sbjct: 319 AAPLSYTQIFGQWVCDQAATDGKLVAITPAMREGSGLVEFERRFPERYFDVGIAEQHAVT 378
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA +KP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAG+VGADGPTH GA+
Sbjct: 379 FAAGLACGNIKPVVAIYSTFLQRAYDQLVHDVALQNLPVLFAIDRAGIVGADGPTHAGAY 438
Query: 288 DTTFMACLPNMVV 300
D +F+ C+PNMV+
Sbjct: 439 DLSFLRCIPNMVL 451
>gi|260438376|ref|ZP_05792192.1| 1-deoxy-D-xylulose-5-phosphate synthase [Butyrivibrio crossotus DSM
2876]
gi|292808962|gb|EFF68167.1| 1-deoxy-D-xylulose-5-phosphate synthase [Butyrivibrio crossotus DSM
2876]
Length = 623
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 187/372 (50%), Gaps = 87/372 (23%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
T+RQ GL E+ DAFG+GH+STSISA L G R+L N
Sbjct: 91 NTLRQLNGLSGFPSLNESKCDAFGMGHASTSISAAL----------GYVKARELSKDNYT 140
Query: 55 VISVIVEGATIARMSYEAINNAGVL----------------------NKALKRLHSNPQF 92
V+SVI +GA M+YEA+NNA +L +K L ++ ++
Sbjct: 141 VVSVIGDGALTGGMAYEALNNASLLKSNMIIILNDNEMSISRNVGGISKVLNTTRTSARY 200
Query: 93 RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGHN 147
+L K+ K G EI + ++ + F FED+GL Y+GPVDGHN
Sbjct: 201 NELKDNV---KNTLSKIPGCGEEIIGRIHKTKSSIKQLFVPGMIFEDMGLTYLGPVDGHN 257
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAM---------------------LPLKLQQ 186
+E L + K + AV+IHV T K K P+ ++
Sbjct: 258 IERLVKTINMAKKVNH--AVVIHVHTTKGKGYPFAERKPSFFHGVDPFDIETGKPVSREK 315
Query: 187 TRLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+ I + MG GTGL F+K+FP R FDVGIAE+HAVTFA
Sbjct: 316 VTTYSDIFSSSITSMAEKDDKVVAITAAMGAGTGLKKFEKNFPDRFFDVGIAEEHAVTFA 375
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA+ G KP+ AIYS+FLQR FDQ+ HDV +QKLPVRF ++RAG+VG DG TH G FD
Sbjct: 376 AGLASAGYKPYVAIYSTFLQRGFDQILHDVCIQKLPVRFIVERAGIVGKDGITHQGIFDI 435
Query: 290 TFMACLPNMVVM 301
+++ +P M +M
Sbjct: 436 SYLNIIPGMTIM 447
>gi|134093560|ref|YP_001098635.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herminiimonas
arsenicoxydans]
gi|133737463|emb|CAL60506.1| 1-deoxy-D-xylulose-5-phosphate synthase
(1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
(DXPS) [Herminiimonas arsenicoxydans]
Length = 609
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 190/371 (51%), Gaps = 88/371 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+V+D FG HSSTSISA L GMA+ G+N
Sbjct: 76 MHSLRQRDGISGFPRRDESVYDTFGTAHSSTSISAAL----------GMALAARTKGENR 125
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
H I+VI +GA A M++EA+NNAG+ LN+ L RL S
Sbjct: 126 HAIAVIGDGAMTAGMAFEALNNAGIHDDINLLVILNDNDMSISPPVGALNRYLARLMSG- 184
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS--RACFFEDLGLYYIGPVDGHNL 148
QF A + K + E+ E G A FE+ G YIGP+DGH+L
Sbjct: 185 QFY-----AAAKNVGKTVLPAPVRELAKRFEEHAKGMIVPATMFEEFGFNYIGPIDGHDL 239
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKE-------------------------KAMLPLK 183
+ L L+ +K + P +HV+T+K K K
Sbjct: 240 DSLIPTLQNLKHLKGP--QFLHVVTKKGQGYKLAEADPVLYHGPGKFDPAEGIKPAAASK 297
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+ T +F L D+++ G G+G+ F++ FP R +DVGIAEQHAVTFAA
Sbjct: 298 VTYTSVFGDWLCDMAAADDKLIGITPAMREGSGMVEFERRFPGRYYDVGIAEQHAVTFAA 357
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EGLKP AIYS+FLQR +DQ+ HDV LQ L V FA+DRAGLVGADG TH G +D
Sbjct: 358 GMACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDIA 417
Query: 291 FMACLPNMVVM 301
++ C+PNMVVM
Sbjct: 418 YLRCIPNMVVM 428
>gi|296136075|ref|YP_003643317.1| deoxyxylulose-5-phosphate synthase [Thiomonas intermedia K12]
gi|295796197|gb|ADG30987.1| deoxyxylulose-5-phosphate synthase [Thiomonas intermedia K12]
Length = 637
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 189/370 (51%), Gaps = 83/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MR +RQ G+ E+ DAFG HSSTSISA L GMA+ G++
Sbjct: 92 MRGLRQKGGISGFPRRDESPFDAFGTAHSSTSISAAL----------GMALAAQRKGESR 141
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
V++VI +GA M++EA+NNAGV LN+ L L S
Sbjct: 142 RVVAVIGDGALTGGMAFEALNNAGVHPEADLLIVLNDNDMSISPPVGALNRHLTGLLSGG 201
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
F A G ++ +++ + A S FE+LG+ Y GP+DGH+L+
Sbjct: 202 LFTAARSTAKQVLSAAPPLLGLARRLEEYAKGLVAPS--PLFEELGVKYFGPIDGHDLDA 259
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKA----------------------MLPLKLQQTR 188
L L ++ + P +L+HV+T+K + + P K +
Sbjct: 260 LIPTLHNLRDMHGP--ILLHVVTKKGQGYKLAEADPVAYHGPGRFDPAVGLAPGKPGKAP 317
Query: 189 LFCKIL----------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
F ++ D R+ G G+GL F + FP R FDVGIAEQHAVTFAAG
Sbjct: 318 TFTQVFGQWLCDMAQADARLVGITPAMREGSGLVEFAERFPQRYFDVGIAEQHAVTFAAG 377
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG+KP AIYS+FLQR +DQV HDV +Q LPV FA+DRAG+VGADG TH GAFD F
Sbjct: 378 LACEGMKPVVAIYSTFLQRGYDQVIHDVAIQNLPVMFAVDRAGVVGADGATHTGAFDIPF 437
Query: 292 MACLPNMVVM 301
+ C+PN+ V+
Sbjct: 438 LRCVPNLSVL 447
>gi|218960499|ref|YP_001740274.1| 1-deoxy-D-xylulose-5-phosphate synthase
(1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
(DXPS) [Candidatus Cloacamonas acidaminovorans]
gi|167729156|emb|CAO80067.1| 1-deoxy-D-xylulose-5-phosphate synthase
(1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
(DXPS) [Candidatus Cloacamonas acidaminovorans str.
Evry]
Length = 622
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/378 (37%), Positives = 192/378 (50%), Gaps = 99/378 (26%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ GL E+ +DAF GHSSTSISA L G+A RDL + H
Sbjct: 89 TLRQYKGLSGFTNREESPYDAFTTGHSSTSISAAL----------GIACARDLNNEQGHC 138
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQFRQLCQEAFSSKDKK----QKFGG 111
I+VI +GA MS+EA+N+ G L K +F + + S K QK+
Sbjct: 139 IAVIGDGALTGGMSFEALNHGGHLQKD--------KFIVILNDNEMSISKNVGGLQKYMA 190
Query: 112 QM----------HEIDAFSREIEAGSRACF--------------------FEDLGLYYIG 141
+M ++ FS + A R F FEDLG Y+G
Sbjct: 191 RMLASKSYNVLKKQVWDFSYTLPANIRRSFIYGAQKLEESMMNILVPNIIFEDLGFKYVG 250
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRLF----------- 190
P+DGH++E L ++K+VK G VLIH++T+K K P + + + LF
Sbjct: 251 PIDGHDIEQLLKIIKRVKNFM-VGPVLIHIVTQKGKGYPPAE-KNSELFHGTGPFDLKTG 308
Query: 191 CKILDNR---------------------------MGGGTGLNLFQKHFPIRCFDVGIAEQ 223
+I D + M GTGL F++ +P R FDVGIAEQ
Sbjct: 309 KQISDGKQTWSELMGSTLITLAQKDPKIIAITAAMTAGTGLTKFEETYPDRFFDVGIAEQ 368
Query: 224 HAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTH 283
H+VT AAG++ +GLKPF AIYS+FLQR DQ+ HDV L KLPV F IDRAGLVG DG TH
Sbjct: 369 HSVTLAAGMSTKGLKPFVAIYSTFLQRALDQIIHDVALPKLPVVFCIDRAGLVGEDGATH 428
Query: 284 CGAFDTTFMACLPNMVVM 301
GAFD +++ +PNM+++
Sbjct: 429 HGAFDLSYLNFVPNMIIL 446
>gi|221135091|ref|ZP_03561394.1| deoxyxylulose-5-phosphate synthase [Glaciecola sp. HTCC2999]
Length = 626
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 187/374 (50%), Gaps = 92/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D F VGHSSTSISA VGMA+ D G
Sbjct: 95 MTTIRQQGGLHPFPWPPESQYDTFAVGHSSTSISAA----------VGMAIAADKEGLGR 144
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
++VI +GA A +++EA+N N G LN L RL +
Sbjct: 145 KTVAVIGDGALTAGLAFEALNHGGDIAKDLVVVLNDNEMSISENVGALNSHLARLLTGNF 204
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGH 146
+ + +D +K + + F+ + E + FE+LG YIGP+DGH
Sbjct: 205 YNTI-------RDGSKKVLSTVPPLKEFASKAEEHIKGMVVPGTIFEELGFNYIGPIDGH 257
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEK----------------------EKAMLPLKL 184
+++ + LK ++ I P ++HV+T+K E+A LP
Sbjct: 258 DVKGMVDTLKNMRNISGPQ--ILHVVTKKGKGYTVAENDPIKFHAVPKFNPEEATLPKSA 315
Query: 185 QQTRLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
+ + I + M G+G+ F K +P + FDV IAEQHAVT
Sbjct: 316 PSSPSYSDIFGDWLCDMAAQDPLLNAITPAMREGSGMVKFSKDYPEQYFDVAIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
AAG+A GLKP AIYS+FLQR +DQ+ HDV +Q LPV FAIDRAG+VGADGPTH GAF
Sbjct: 376 LAAGMAIRGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGPTHQGAF 435
Query: 288 DTTFMACLPNMVVM 301
D +++ C+PNMV+M
Sbjct: 436 DISYLRCIPNMVIM 449
>gi|86157524|ref|YP_464309.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anaeromyxobacter
dehalogenans 2CP-C]
gi|118595491|sp|Q2IPZ2.1|DXS_ANADE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|85774035|gb|ABC80872.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 636
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 186/371 (50%), Gaps = 84/371 (22%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
RTIR GL E+ HDAFGVGH+ST+ISA L GM + + G+
Sbjct: 90 RTIRTEGGLAGFPERHESAHDAFGVGHASTAISAAL----------GMIEAKRVTGEPGK 139
Query: 55 VISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFSSKDKKQK 108
V++V+ +GA +++E +N AG L + L + +P L E FS K +
Sbjct: 140 VVAVVGDGAMTGGVAFEGLNQAGYLGRNLLVVLNDNEMSISPNVGAL-SEWFSKKFASRT 198
Query: 109 FGGQMHEIDAFSREIEAGSRAC------------------FFEDLGLYYIGPVDGHNLED 150
+ ++ F + G A FE LG +Y+GPVDGH+++
Sbjct: 199 YNRWRRQVKEFLESVPKGPEAIGIIRHGINATKALVTPGILFEGLGFHYVGPVDGHDVKG 258
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L +++ P VL+H IT K K P + +
Sbjct: 259 LVETFQKLAVFDGP--VLLHAITTKGKGYHPAESDKATRGHGLSFFDVATGKPVKKSPGA 316
Query: 187 ---TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T LF + L D R M GTGL ++ FP R +DVGIAEQHAVTFAA
Sbjct: 317 KAYTDLFAEALCEEMEHDPRVVAITAAMLEGTGLIKAKQRFPDRTYDVGIAEQHAVTFAA 376
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA EG++P AIYS+FLQR +DQ+ HDV LQKLPV FA+DR GLVGADG TH GAFD
Sbjct: 377 GLACEGIRPVVAIYSTFLQRAYDQIIHDVALQKLPVTFALDRGGLVGADGKTHQGAFDLA 436
Query: 291 FMACLPNMVVM 301
++ C+P +V+M
Sbjct: 437 YLRCVPGLVLM 447
>gi|332141879|ref|YP_004427617.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii str.
'Deep ecotype']
gi|410862283|ref|YP_006977517.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii
AltDE1]
gi|229807532|sp|B4RVY8.1|DXS_ALTMD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|327551901|gb|AEA98619.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii str.
'Deep ecotype']
gi|410819545|gb|AFV86162.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii
AltDE1]
Length = 625
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/367 (38%), Positives = 189/367 (51%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D F VGHSSTSISA L GMAV + GK+
Sbjct: 95 MSTIRQKNGLHPFPWPPESEYDTFAVGHSSTSISAAL----------GMAVAAEKEGKDR 144
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
V+SVI +GA A M++EA+N+AG + K + + ++ + R L
Sbjct: 145 KVVSVIGDGAMTAGMAFEALNHAGDIKKDMVVVLNDNEMSISENVGALNSHLARLLTGNF 204
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
F+S +D +K + I F+ E + FE+LG YIGP+DGH++ +
Sbjct: 205 FNSIRDGGKKLLSNVPPIKEFASRAEEHLKGMVVPGTIFEELGFNYIGPIDGHDVNAVVD 264
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQTRLF------------------ 190
L+ ++ P L+HV+T+K K P+K F
Sbjct: 265 TLRNMRNFDGPQ--LLHVVTKKGKGYAVAEEDPIKFHAVPKFNPADNALPKSKPSAPTYS 322
Query: 191 -------CKI---------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
C + + M G+G+ F + FP + FDV IAEQHAVTF AGLA
Sbjct: 323 AIFGQWLCDMAAQDPKLMAVTPAMREGSGMVEFSQRFPEQYFDVAIAEQHAVTFGAGLAK 382
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
+G+ AIYSSFLQR +DQ+ HDV +Q LPV FAIDRAG+VGADGPTH GAFD F+ C
Sbjct: 383 DGMNAVVAIYSSFLQRAYDQLIHDVAIQDLPVLFAIDRAGIVGADGPTHQGAFDIAFLRC 442
Query: 295 LPNMVVM 301
+PNMVVM
Sbjct: 443 IPNMVVM 449
>gi|78186338|ref|YP_374381.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chlorobium luteolum DSM
273]
gi|118595597|sp|Q3B5P3.1|DXS_PELLD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|78166240|gb|ABB23338.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chlorobium luteolum DSM
273]
Length = 632
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 187/372 (50%), Gaps = 83/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T R+ G+ E+ HDAFG GH+STSISA GMA GRDL G
Sbjct: 92 MQTNRKYGGIAGFPKIHESPHDAFGTGHASTSISAA----------AGMAAGRDLKGGRE 141
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFSSKDKKQ 107
+++VI +G+ M++EA+N+ G L + ++ +P L K
Sbjct: 142 KMVAVIGDGSMTGGMAFEAMNHLGDLKSDVLVILNDNQMAISPSTGGLKNHLVDITLNKT 201
Query: 108 KFGGQMHEIDAFS-----------REIEAGSRAC-----FFEDLGLYYIGPVDGHNLEDL 151
+ ++ S R +E G +A FFE LGL Y GP+DGH++ L
Sbjct: 202 YNKARRLLWNSMSLLNHEGAKNALRRLEDGMKAALTPGAFFEALGLRYFGPIDGHDMGRL 261
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQT------------------------ 187
LK++ +P+P L+HV+T K K LP + Q+
Sbjct: 262 VRALKEMHELPNP--KLLHVVTTKGKGFLPAEENQSGWHAHSGGFDTTTGMTAKKTGAPD 319
Query: 188 -----RLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+F + L M GT L+LF+K P R +DVGIAE HAVTFA
Sbjct: 320 PPKYQEIFGEALVEMALKDPAITAITAAMPSGTSLDLFEKAAPDRFYDVGIAEGHAVTFA 379
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA EGLKP CAIYS+FLQR DQ+ HDV LQ L V FAIDRAGLVG DGPTH GAFD
Sbjct: 380 AGLALEGLKPVCAIYSTFLQRALDQLIHDVALQNLHVVFAIDRAGLVGEDGPTHHGAFDL 439
Query: 290 TFMACLPNMVVM 301
+F+ +P + +M
Sbjct: 440 SFLHAVPGLTIM 451
>gi|388256548|ref|ZP_10133729.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cellvibrio sp. BR]
gi|387940248|gb|EIK46798.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cellvibrio sp. BR]
Length = 636
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 187/367 (50%), Gaps = 79/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ D FGVGHSSTSISA GMA+G + G
Sbjct: 99 MGTIRQGSGLSGFPKREESEFDTFGVGHSSTSISAAQ----------GMAIGAKMAGIER 148
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-PQFRQLCQEAFSSK- 103
V ++I +GA A M++EA+N+A VLN + N F + ++SK
Sbjct: 149 KVAAIIGDGAMTAGMAFEALNHAAHTETDMLVVLNDNNMSISPNVGGFSTYLSKIWASKF 208
Query: 104 -----DKKQKFGGQMHEIDAFSREIEAG-----SRACFFEDLGLYYIGPVDGHNLEDLAY 153
+ ++ G + F+R E S FE++G Y+GP++GH+L DL
Sbjct: 209 YNSLREGSKQVLGIIPPAWEFARRTEEHFKGFMSPGTLFEEMGFNYVGPINGHDLGDLVR 268
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQT-------------------------- 187
L ++ I P L+H+IT+K K P +L
Sbjct: 269 CLSNLREIKGPK--LLHIITQKGKGFEPAELDPVGYHALNKIEPKKAELGAVDAPKKVKY 326
Query: 188 -----RLFCKIL--DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
R C + D+++ G G+G+ F HFP R +DV IAEQHAVT AAG+A
Sbjct: 327 QDVFGRWLCDMAAQDDKLIGITPAMCEGSGMVEFAAHFPERFYDVAIAEQHAVTLAAGMA 386
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
EG KP AIYS+FLQR +DQ+ HDV LQ L V FAIDRAGLVG DGPTH G+FD +F+
Sbjct: 387 CEGQKPVVAIYSTFLQRAYDQLVHDVALQNLDVTFAIDRAGLVGEDGPTHAGSFDISFLR 446
Query: 294 CLPNMVV 300
C+PNMV+
Sbjct: 447 CIPNMVI 453
>gi|402299133|ref|ZP_10818767.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacillus alcalophilus ATCC
27647]
gi|401725673|gb|EJS98944.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacillus alcalophilus ATCC
27647]
Length = 629
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 190/371 (51%), Gaps = 85/371 (22%)
Query: 1 MRTIRQTCGL----ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVI 56
+R + CG E+ HD + GHSSTS+SA + GMA RDL G++N V+
Sbjct: 90 LRQYQGLCGFPKRNESEHDVWETGHSSTSLSAAM----------GMATARDLKGEDNSVV 139
Query: 57 SVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFRQ 94
++I +GA M+ EA+N N G L+ L +L + ++ +
Sbjct: 140 AIIGDGALTGGMALEALNHIGHEQKDLIVVLNDNEMSIAPNVGALHNVLGKLRTAGKYHK 199
Query: 95 LCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+E K FGG++ D+ + +G FFE++G Y+GPVDGH+L+
Sbjct: 200 AKEELEMLIKKIPAFGGKLAATAERVKDSLKYLLVSG---VFFEEMGFTYLGPVDGHDLD 256
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKA--------------MLPLKLQQ--------- 186
DL +K K P VLIHV+T+K K + P K++
Sbjct: 257 DLMENMKYAKKTKGP--VLIHVLTKKGKGYEPAENDALGTWHGLGPYKIESGEVVKKPGP 314
Query: 187 ---TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+ +F + L D R M GGT L++F K FP R FDVGIAEQHA T A
Sbjct: 315 PSYSGVFAETLKKIAREDERVVAITAAMPGGTKLDVFAKEFPERMFDVGIAEQHATTMAG 374
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA +GLKP A+YS+FLQR +DQ+ HD+ Q L V FAIDRAGLVGADG TH G FD
Sbjct: 375 GLATQGLKPVFAVYSTFLQRGYDQIVHDICRQNLNVLFAIDRAGLVGADGETHQGVFDIA 434
Query: 291 FMACLPNMVVM 301
++ LPNM ++
Sbjct: 435 YLRHLPNMTIL 445
>gi|312130608|ref|YP_003997948.1| 1-deoxy-d-xylulose-5-phosphate synthase [Leadbetterella byssophila
DSM 17132]
gi|311907154|gb|ADQ17595.1| 1-deoxy-D-xylulose-5-phosphate synthase [Leadbetterella byssophila
DSM 17132]
Length = 639
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 182/359 (50%), Gaps = 81/359 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG-KNNHVISVIVEGATIARMS 69
E+ +DAFGVGHSSTSISA L GMA+G G K+ H I+VI +GA A ++
Sbjct: 110 ESEYDAFGVGHSSTSISAAL----------GMAMGSRHKGIKDKHHIAVIGDGALTAGLA 159
Query: 70 YEAIN-----------------------NAGVLNKALKRLHSNPQFRQLCQEAFSSKDKK 106
+E +N N G L + L + ++ + ++ E ++ K
Sbjct: 160 FEGMNHAGMEKDANLLIILNDNCMAIDPNVGALKEYLTDITTSKTYNKVKDEVWNLLGKF 219
Query: 107 QKFGGQMHEIDAFSREIEAG---SRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
FG EI A G S++ FE L L Y GP+DGH+++ L VL +K IP
Sbjct: 220 SSFGKSTREIVAKVENAIKGTLLSQSNIFEALNLRYFGPIDGHDIDHLVSVLNDLKDIPG 279
Query: 164 PGAVLIHVITEKEKAMLPLKLQQTR-----LFCKI------------------------- 193
P ++H IT K K P + QT+ LF K+
Sbjct: 280 PK--ILHCITVKGKGYKPAEQDQTKWHAPGLFDKVTGEIKKKVYTVPMPPKFQDVFGHTI 337
Query: 194 ------------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFC 241
+ M G+ LN+ K P R FDVGIAEQHAVT +AG+A +GL FC
Sbjct: 338 VELAEQNPKIVGITPAMPSGSSLNIMMKAMPDRAFDVGIAEQHAVTLSAGMATQGLTVFC 397
Query: 242 AIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVV 300
IYSSF+QR +DQV HDV +Q+LPV F +DRAG GADGPTH GA+D +M C+PNMVV
Sbjct: 398 NIYSSFMQRAYDQVIHDVCIQQLPVIFCLDRAGFAGADGPTHHGAYDIAYMRCIPNMVV 456
>gi|421874464|ref|ZP_16306068.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus laterosporus
GI-9]
gi|372456508|emb|CCF15617.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus laterosporus
GI-9]
Length = 614
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 188/372 (50%), Gaps = 88/372 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ GL E+ HD + GHSSTS+S + GMA RDL +N HV
Sbjct: 75 TLRQYKGLCGFPKMAESAHDVWETGHSSTSLSGAM----------GMASARDLKKENYHV 124
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
I VI +GA M++EA+N N G ++ L +L ++ +
Sbjct: 125 IGVIGDGALTGGMAFEALNHIGHEKKNVIVVLNDNEMSIAPNVGAMHNYLGKLRTDHIYN 184
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+ E S GG++ ++ D+ + +G FE+LG YIGP+DGHNL
Sbjct: 185 RAKDEVESLLKAIPAVGGKLAQLAEKVKDSMKYMLVSG---ILFEELGFTYIGPIDGHNL 241
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP-----LKLQQT---------------- 187
E + L+ A G VL+HVIT+K K LP +K T
Sbjct: 242 ELVIDSLR--TAANTRGPVLLHVITKKGKGYLPAEQNAMKWHGTDTYKIESGEMIKAVAA 299
Query: 188 -----RLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+F L D+R M G+GL + +P R FDVGIAEQHA TFA
Sbjct: 300 APAYKSVFADTLIKLTQQDDRIVAITPAMPDGSGLLKYASVYPERMFDVGIAEQHACTFA 359
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA +G+KPF AIYS+FLQR +DQ+ HDV KLPV FA+DRAGLVGADG TH G +D
Sbjct: 360 AGLATQGIKPFLAIYSTFLQRAYDQLIHDVARMKLPVVFAVDRAGLVGADGETHQGVYDI 419
Query: 290 TFMACLPNMVVM 301
FM +PNMV+M
Sbjct: 420 AFMRAIPNMVIM 431
>gi|119356506|ref|YP_911150.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chlorobium
phaeobacteroides DSM 266]
gi|119353855|gb|ABL64726.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chlorobium
phaeobacteroides DSM 266]
Length = 643
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 191/375 (50%), Gaps = 86/375 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T RQ GL E+ +DAFG GH+STSISA RDL G
Sbjct: 100 MKTNRQYGGLAGFPRIFESPYDAFGTGHASTSISAAAGMAAA----------RDLSGGTE 149
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF----------RQLCQEAFS-S 102
+I+VI +G+ M++EA+N+ G + + ++ Q L A + +
Sbjct: 150 KMIAVIGDGSMTGGMAFEAMNHLGDTKSDVLVILNDNQMAISPSTGGLKTHLVNIALNKT 209
Query: 103 KDKKQKFGGQMHEI---------DAFSREIEAGSRACF-----FEDLGLYYIGPVDGHNL 148
+K +KF + + R++E G +A F FE LGL Y GP+DGHNL
Sbjct: 210 YNKTRKFIWNSISLLNNDLGDTAKSLVRKLEDGIKAAFTPGAFFEALGLRYFGPIDGHNL 269
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR-------------------- 188
E L LK+++ +P P L+HV+T K K P + Q++
Sbjct: 270 EQLVKALKEMQELPHPK--LLHVVTTKGKGFKPAEENQSKWHAHNGGFDTTTGKTIVTAQ 327
Query: 189 ---------LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAV 226
+F + L D R M GT L+LFQ P R FDVGIAEQHAV
Sbjct: 328 KAGPPKYQEVFGETLVELALKDPRITAITAAMPSGTSLDLFQNALPNRFFDVGIAEQHAV 387
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFAAGLA +G KP CAIYS+FLQR +DQ+ HDV Q L V FAIDRAGLVG DGPTH GA
Sbjct: 388 TFAAGLAIQGFKPVCAIYSTFLQRGYDQIIHDVAQQNLHVVFAIDRAGLVGEDGPTHHGA 447
Query: 287 FDTTFMACLPNMVVM 301
FD +F+ +PN V+M
Sbjct: 448 FDLSFLQPIPNFVIM 462
>gi|114331489|ref|YP_747711.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas eutropha C91]
gi|122313705|sp|Q0AFY6.1|DXS_NITEC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|114308503|gb|ABI59746.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas eutropha C91]
Length = 614
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/349 (38%), Positives = 184/349 (52%), Gaps = 70/349 (20%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +DAFG HSSTSISA L GMAV + H I++I +GA A M++
Sbjct: 106 ESEYDAFGTAHSSTSISAAL----------GMAVAARINKIKQHAIAIIGDGAMSAGMAF 155
Query: 71 EAINNAGVLNKALKRLHS-------------NPQFRQLCQEAFSSKDKK--QKFGGQMHE 115
EA+NNAGV++ L + + N +L F + ++ ++ G +
Sbjct: 156 EALNNAGVMDADLLVILNDNDMSISPPVGALNHYLAKLMSGRFYATARRAGERMLGVVPP 215
Query: 116 IDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIH 170
+ ++ E + FE+ G YIGP+DGH+L+ L L +K + P +H
Sbjct: 216 VLELAKRAEEHVKGMVTPGTLFEEFGFNYIGPIDGHDLDILLTTLNNIKQLDGPQ--FLH 273
Query: 171 VITEKEKAMLP-------------------------LKLQQTRLFCKIL------DNRMG 199
++T K K P + T++F L D+R+
Sbjct: 274 IVTRKGKGYKPAEEDPVLYHGVGKFEPGKGVIPKPSTRPAYTQIFGDWLCDMAAKDSRLI 333
Query: 200 G-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCF 252
G G+GL F K +P R FDVGIAEQHAVTFAAG A EGLKP AIYS+FLQR +
Sbjct: 334 GITPAMREGSGLIRFSKEYPDRYFDVGIAEQHAVTFAAGAACEGLKPVVAIYSTFLQRAY 393
Query: 253 DQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DQ+ HDV +Q LPV FAIDRAGLVGADGPTH G+FD +++ C+PN+ VM
Sbjct: 394 DQLIHDVAIQNLPVVFAIDRAGLVGADGPTHAGSFDLSYLRCIPNITVM 442
>gi|34498147|ref|NP_902362.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chromobacterium violaceum
ATCC 12472]
gi|41016944|sp|Q7NUK5.1|DXS_CHRVO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|34104002|gb|AAQ60362.1| 1-deoxy-D-xylulose 5-phosphate synthase [Chromobacterium violaceum
ATCC 12472]
Length = 616
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 195/370 (52%), Gaps = 83/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +D FGVGHSSTSI A L GMAV LG +
Sbjct: 89 MHTMRQHNGLAGFPKREESEYDTFGVGHSSTSIGAAL----------GMAVAAKTLGVDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFSSKDKKQ 107
+++I +GA A ++EA+NNAG ++ L + +P L + +K
Sbjct: 139 KSVAIIGDGAMTAGQAFEALNNAGAMDTDLLVILNDNDMSISPNVGALNN--YLAKLMSG 196
Query: 108 KFGGQMHE-----------IDAFSREIEAGSRACF-----FEDLGLYYIGPVDGHNLEDL 151
+F M E + + ++E + F FE+ G YIGP+DGH+++ L
Sbjct: 197 RFYAAMREGSSKVLGIAPPLKEIASKVEEHVKGFFTPGTLFEEFGFNYIGPIDGHDVDVL 256
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAML-----PLKL---------------------- 184
LK ++++ P +H++T+K + P+K
Sbjct: 257 VDTLKNIRSLKGP--QFLHIVTKKGQGYKLAENDPVKYHGVTKFDPANGLASGKGGAGKP 314
Query: 185 QQTRLF----CKI--LDNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
Q T++F C + LD R+ G G+G+ F+K P R +DV IAEQHAVTFA G
Sbjct: 315 QYTQVFGDWLCDMAKLDKRLVGITPAMREGSGMVRFEKEHPDRYYDVAIAEQHAVTFAGG 374
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
+A +GLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADGPTH GAFD ++
Sbjct: 375 MACDGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVMFALDRAGLVGADGPTHAGAFDLSY 434
Query: 292 MACLPNMVVM 301
+ C+PNM VM
Sbjct: 435 LRCIPNMTVM 444
>gi|428224504|ref|YP_007108601.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geitlerinema sp. PCC 7407]
gi|427984405|gb|AFY65549.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geitlerinema sp. PCC 7407]
Length = 637
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/374 (37%), Positives = 184/374 (49%), Gaps = 88/374 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+ D FG GH+STSISA L GMA+ RDL G+ V
Sbjct: 89 TLRQKDGIAGYLKRGESKFDHFGAGHASTSISAAL----------GMAIARDLKGEKFKV 138
Query: 56 ISVIVEGATIARMSYEAIN-----------------------NAGVLNKALKRLHSNPQF 92
++VI +GA M+ EAIN N G L++ L ++ +P
Sbjct: 139 VAVIGDGALTGGMALEAINHAGHLPRTNLMVVLNDNDMSISPNVGALSRYLNKMRLSPPM 198
Query: 93 RQLCQEAFSSKDKKQKFGG-----QMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
Q + + K F G +++ + + + FE+LG YIGPVDGHN
Sbjct: 199 -QFLSDNLEEQFKHLPFVGDSLSPELNRVKEGMKRLAVSKVGAVFEELGFTYIGPVDGHN 257
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEK---------------------------AML 180
LE+L +Q + G VL+HV T K K A
Sbjct: 258 LEELITTFQQAHS--QVGPVLVHVSTTKGKGYAIAEQDQVGYHAQSPFNLATGKAIPASK 315
Query: 181 PLKLQQTRLFCKIL-----DN--------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
P +++F L DN M GTGL+ Q P + DVGIAEQHAVT
Sbjct: 316 PKPPSYSKVFAHTLVKLAEDNPKIVGITAAMATGTGLDKLQAKLPKQYMDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
A GLA EG++P AIYS+FLQR FDQV HDV +Q LPV F +DRAG+VGADGPTH G +
Sbjct: 376 LAGGLACEGMRPVVAIYSTFLQRAFDQVVHDVCIQNLPVFFCLDRAGIVGADGPTHQGMY 435
Query: 288 DTTFMACLPNMVVM 301
D +++ C+PNMV+M
Sbjct: 436 DISYLRCIPNMVLM 449
>gi|254469091|ref|ZP_05082497.1| 1-deoxy-D-xylulose-5-phosphate synthase [beta proteobacterium KB13]
gi|207087901|gb|EDZ65184.1| 1-deoxy-D-xylulose-5-phosphate synthase [beta proteobacterium KB13]
Length = 608
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/379 (35%), Positives = 189/379 (49%), Gaps = 90/379 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+ T+RQ G+ E+VHD FG GHSSTSIS L G++ NN
Sbjct: 93 LHTLRQFKGISGFPKRDESVHDHFGTGHSSTSISVAL----------GISEAMLKNKSNN 142
Query: 54 HVISVIVEGATIARMSYEAINNAG----------------------VLNKALKRLHSNPQ 91
I++I +GA A M++EA+NNAG LN L RL S
Sbjct: 143 KSIAIIGDGAMTAGMAFEALNNAGESKSNILVILNDNDMSISKNVGALNNYLARLLSGKI 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGH 146
+ + K ++ ++ I +++ E + FE+ G YIGP+DGH
Sbjct: 203 YGGI-------KSTSKQIFEKVPSILELAKKTEEHVKGMVTPGTLFEEFGFNYIGPIDGH 255
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL---------------FC 191
N++ L L+ +K++ P +HV+T+K LP + + F
Sbjct: 256 NIDILVDTLENIKSLDGPQ--FLHVVTKKGHGYLPAEKDPNKFHGISKKSASQANQKTFT 313
Query: 192 KILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++ + M G+GL F K +P R +DVGIAEQHAVTFAAGLA
Sbjct: 314 QVFEEWVLSYAKKDKKLIAVTPAMADGSGLTTFSKKYPSRFYDVGIAEQHAVTFAAGLAI 373
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
G KP AIYS+F+QR +DQ+ HDV LQ +P+ FAIDRAGLVGADG TH G FD +F+ C
Sbjct: 374 HGYKPVVAIYSTFMQRAYDQIIHDVALQNIPMLFAIDRAGLVGADGATHTGNFDVSFIRC 433
Query: 295 LPNMVVM-----KDIKLVL 308
+PN V+M ++KL+L
Sbjct: 434 IPNTVIMHPTNETELKLML 452
>gi|109897644|ref|YP_660899.1| deoxyxylulose-5-phosphate synthase [Pseudoalteromonas atlantica
T6c]
gi|123171493|sp|Q15W93.1|DXS_PSEA6 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|109699925|gb|ABG39845.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoalteromonas
atlantica T6c]
Length = 621
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/367 (38%), Positives = 188/367 (51%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D F VGHSSTSISA VGMAV +
Sbjct: 95 MPTIRQKNGLHPFPWPNESEYDTFAVGHSSTSISAA----------VGMAVAAEKEALGR 144
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
V++VI +GA A M++EA+N+ G ++K + + ++ + R L
Sbjct: 145 KVVAVIGDGAMTAGMAFEALNHGGDIDKDMLVILNDNEMSISENVGALNSHLARLLTGNF 204
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
F+S +D +K + I F+ E + FE+LG YIGP+DGH++ +
Sbjct: 205 FNSIRDGGKKLLSSVPPIKEFASRAEEHIKGMVVPGTIFEELGFNYIGPIDGHDVNGVVD 264
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQT--------------------- 187
LK ++ I GA ++HV+T+K K P+K
Sbjct: 265 TLKNMRNIK--GAQILHVVTKKGKGYELAEKDPIKFHAVPKFNPSADGLPKAAPSDPTFS 322
Query: 188 ----RLFCKI---------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
R C + + M G+G+ F + FP + FDV IAEQHAVTFAAGLA
Sbjct: 323 NIFGRWLCDMAQQDPNLMAVTPAMREGSGMVEFSQKFPAQYFDVAIAEQHAVTFAAGLAK 382
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EG AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADGPTH GAFD F+ C
Sbjct: 383 EGQNAVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGLVGADGPTHQGAFDIPFLRC 442
Query: 295 LPNMVVM 301
+PNMV+M
Sbjct: 443 IPNMVIM 449
>gi|389774101|ref|ZP_10192282.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodanobacter spathiphylli
B39]
gi|388438719|gb|EIL95459.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodanobacter spathiphylli
B39]
Length = 630
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 145/374 (38%), Positives = 189/374 (50%), Gaps = 92/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+ TI++ GL E+ D FGVGHSSTSISA L GMA+ G +
Sbjct: 94 ITTIKKKDGLAPFPRREESEFDTFGVGHSSTSISAAL----------GMAIAAQHQGDHR 143
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
V++VI +GA A M++EA+N N G + K + R ++ +
Sbjct: 144 KVVAVIGDGAMTAGMAFEALNHGGDVEPDMLVVFNDNGMSISENVGAMTKMMARAMASRR 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
QL + A +Q F G+ F + E ++ F FE+LG +Y GP+DGH
Sbjct: 204 LNQLRERA-KRAIPRQSFVGR------FFKRWEEHAKGMFVPSTLFEELGFHYTGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAML------------------- 180
N+ L L+ VK +P P L+HVIT K E+A +
Sbjct: 257 NIPQLLQALRTVKNLPGP--QLLHVITTKGKGYAPAEEAQIEYHAVGPFDPQAGLVKKNT 314
Query: 181 PLKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
P+K T +F L D R M G+GL F K +P R FDV IAEQHAVT
Sbjct: 315 PVKPTYTDIFGNWLCDQAAADPRLLAITPAMREGSGLVRFSKEYPDRYFDVAIAEQHAVT 374
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
AAG+A EG KP AIYS+FLQR +DQ HDV LQ L V FAIDRAG+VG DG TH G+F
Sbjct: 375 LAAGMACEGAKPVVAIYSTFLQRAYDQAIHDVALQNLDVTFAIDRAGVVGPDGATHSGSF 434
Query: 288 DTTFMACLPNMVVM 301
D +F+ CLPN V+M
Sbjct: 435 DLSFLRCLPNFVIM 448
>gi|339010260|ref|ZP_08642830.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus laterosporus
LMG 15441]
gi|338772415|gb|EGP31948.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus laterosporus
LMG 15441]
Length = 628
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 188/372 (50%), Gaps = 88/372 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ GL E+ HD + GHSSTS+S + GMA RDL +N HV
Sbjct: 89 TLRQYKGLCGFPKMAESAHDVWETGHSSTSLSGAM----------GMASARDLKKENYHV 138
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
I VI +GA M++EA+N N G ++ L +L ++ +
Sbjct: 139 IGVIGDGALTGGMAFEALNHIGHEKKNVIVVLNDNEMSIAPNVGAMHNYLGKLRTDHIYN 198
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+ E S GG++ ++ D+ + +G FE+LG YIGP+DGHNL
Sbjct: 199 RAKDEVESLLKAIPAVGGKLAQLAEKVKDSMKYMLVSG---ILFEELGFTYIGPIDGHNL 255
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP-----LKLQQT---------------- 187
E + L+ A G VL+HVIT+K K LP +K T
Sbjct: 256 ELVIDSLR--TAANTRGPVLLHVITKKGKGYLPAEQNAMKWHGTDTYKIESGEMIKAVAA 313
Query: 188 -----RLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+F L D+R M G+GL + +P R FDVGIAEQHA TFA
Sbjct: 314 APAYKSVFADTLIKLTQQDDRIVAITPAMPDGSGLLKYASVYPERMFDVGIAEQHACTFA 373
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA +G+KPF AIYS+FLQR +DQ+ HDV KLPV FA+DRAGLVGADG TH G +D
Sbjct: 374 AGLATQGMKPFLAIYSTFLQRAYDQLIHDVARMKLPVVFAVDRAGLVGADGETHQGVYDI 433
Query: 290 TFMACLPNMVVM 301
FM +PNMV+M
Sbjct: 434 AFMRAIPNMVIM 445
>gi|298492661|ref|YP_003722838.1| deoxyxylulose-5-phosphate synthase ['Nostoc azollae' 0708]
gi|298234579|gb|ADI65715.1| deoxyxylulose-5-phosphate synthase ['Nostoc azollae' 0708]
Length = 635
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 182/374 (48%), Gaps = 88/374 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ EN D FG GH+STSISA L GMA+ RDL G+
Sbjct: 89 TLRQKDGVAGYLKRCENKFDHFGAGHASTSISAAL----------GMALARDLKGEKFKS 138
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKA-----------------------LKRLHSNPQF 92
++VI +GA M+ EAIN+AG L K L ++ +P
Sbjct: 139 VAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPNVGAIPRYLNKMRLSPPV 198
Query: 93 RQLCQEAFSSKDKKQKFGGQ-----MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
Q + + K F G+ + I + + FE+LG Y+GP+DGHN
Sbjct: 199 -QFLSDGIEEQLKHIPFVGESISPELERIKEGMKRLAVPKVGAVFEELGFTYMGPMDGHN 257
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAM-----------------------LPLKL 184
LE+L +Q I P VL+HV+T K K +P
Sbjct: 258 LEELIATFQQAHKITGP--VLVHVVTTKGKGYELAEKDQVGYHAQNPFNLATGKAIPSSK 315
Query: 185 QQTRLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
+ + K+ + M GTGL+ Q P + DVGIAEQHAVT
Sbjct: 316 PKPPAYAKVFSHTLVKLAEQNPKIVGITAAMATGTGLDKLQAKLPNQYIDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
AAGLAAEG++P AIYS+FLQR +DQ+ HDV +Q LPV F +DR+G+VGADGPTH G +
Sbjct: 376 LAAGLAAEGMRPVAAIYSTFLQRAYDQIIHDVCIQNLPVFFCLDRSGIVGADGPTHQGMY 435
Query: 288 DTTFMACLPNMVVM 301
D +M C+PNMVVM
Sbjct: 436 DIAYMRCIPNMVVM 449
>gi|398905863|ref|ZP_10653157.1| deoxyxylulose-5-phosphate synthase [Pseudomonas sp. GM50]
gi|398173976|gb|EJM61788.1| deoxyxylulose-5-phosphate synthase [Pseudomonas sp. GM50]
Length = 631
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/346 (39%), Positives = 184/346 (53%), Gaps = 67/346 (19%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +IRQ G+ E+ D FG HSSTSISA L GMA+ +
Sbjct: 89 MASIRQLGGISGFPRRCESPFDTFGTAHSSTSISAAL----------GMALAARNQAQPR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQM 113
H I+VI +GA M+YEA+NNAG+ + + N + + ++ + G++
Sbjct: 139 HCIAVIGDGAVTGGMAYEAMNNAGLYKELPLLVILNDNDMSISPPVGALRE----YFGKL 194
Query: 114 HEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVIT 173
++ +G+ A FF+ LG Y GP+DGHNL++L L +K + P L+H++T
Sbjct: 195 KQVKG------SGTDATFFKALGFNYTGPIDGHNLDELLPALHALKKLRGP--QLLHIVT 246
Query: 174 EKEKAMLPL-------------------------KLQQTRLFCKIL------DNR----- 197
EK P K T++F L D R
Sbjct: 247 EKGHGYTPAAENPVLYHGPGKFDPAQGIDPAGAAKPTYTQVFGDWLCDEADVDPRIVAIT 306
Query: 198 --MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQV 255
M G+GL F++ FP R FDVGIAEQHA+TF AGLAA+GLKP AIYS+FLQR +DQ+
Sbjct: 307 PAMREGSGLVEFERRFPDRYFDVGIAEQHALTFTAGLAADGLKPVVAIYSTFLQRAYDQL 366
Query: 256 AHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
HD+ +Q LPV FAIDRAG+VGADG TH GAFD ++ C+PN+ VM
Sbjct: 367 IHDIAIQNLPVVFAIDRAGIVGADGATHMGAFDIAYLRCIPNLTVM 412
>gi|237809245|ref|YP_002893685.1| deoxyxylulose-5-phosphate synthase [Tolumonas auensis DSM 9187]
gi|237501506|gb|ACQ94099.1| deoxyxylulose-5-phosphate synthase [Tolumonas auensis DSM 9187]
Length = 627
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 190/374 (50%), Gaps = 92/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ G+ E+ +D VGHSSTSI A L GMAV G ++
Sbjct: 102 MATIRQKDGVHPFPWREESEYDPLSVGHSSTSIGAAL----------GMAVAAKRQGLDH 151
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
V++VI +GA A M++EA+N N G LN L + S P
Sbjct: 152 KVVAVIGDGALTAGMAFEALNHAGDLHEDMLVILNDNEMSISENVGALNNHLAKWLSGPV 211
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGH 146
+ L ++ +K + + +R E + FE+LG YIGP+DGH
Sbjct: 212 YTTL-------REGGKKVLSGLPPVKELARRAEEHIKGMVIPGTLFEELGFNYIGPIDGH 264
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPL------------------------ 182
+++ L LK ++ + P L+HV+T+K K P
Sbjct: 265 DIKALVNTLKNMRQLKGPQ--LLHVMTKKGKGYEPAEKDPIGYHGVPKFNPEDDCLPKNK 322
Query: 183 --KLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVT 227
K + +F + L D+++ G G+G+ F + +P R FDV IAEQHAVT
Sbjct: 323 GGKPTFSNIFGQWLCDMAESDSKLVGITPAMREGSGMVEFSQKYPERYFDVAIAEQHAVT 382
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA EG+KP AIYSSF+QR +DQ+ HDV +Q LPV FAIDRAGLVGADGPTH GAF
Sbjct: 383 FAAGLAIEGMKPVVAIYSSFMQRAYDQIIHDVAIQNLPVLFAIDRAGLVGADGPTHQGAF 442
Query: 288 DTTFMACLPNMVVM 301
D +F+ +PNMV+M
Sbjct: 443 DISFLRTIPNMVIM 456
>gi|149928101|ref|ZP_01916348.1| 1-deoxy-D-xylulose-5-phosphate synthase [Limnobacter sp. MED105]
gi|149823187|gb|EDM82424.1| 1-deoxy-D-xylulose-5-phosphate synthase [Limnobacter sp. MED105]
Length = 639
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/369 (37%), Positives = 188/369 (50%), Gaps = 83/369 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +RQ G+ E+ +DAFG HSSTSISA L GMAV LG N
Sbjct: 89 MPGLRQYGGISGFPKRSESEYDAFGTAHSSTSISAAL----------GMAVASRNLGVNR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +G+ A M++EA+NNAGV LNK L +L S
Sbjct: 139 KHIAVIGDGSMTAGMAFEALNNAGVTPDIDLLVILNDNDMSISPPVGALNKYLAKLLSGR 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+ + H ++ + + S A FE+ G Y GP+DGH+L+
Sbjct: 199 MLNNVKEVGKGILGVAPPLYELAHRLEEHVKGMM--SPATLFEEFGFNYYGPIDGHDLDA 256
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAMLPLKL 184
L L+ ++A+ P + +HVIT+K +K+ P
Sbjct: 257 LVPTLQNLRAMKGP--IFLHVITKKGAGYKLAEQDPVLYHGPGKFDPSIGIQKSTTPKPP 314
Query: 185 QQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T++F K L D ++ G G+G+ F++ FP R FDVGIAEQHAVTFAAG
Sbjct: 315 TYTQIFGKWLCDMAQSDRKLVGITPAMREGSGMVEFERRFPSRYFDVGIAEQHAVTFAAG 374
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG+KP AIYS+FLQR +DQ+ HDV LQ L V FA+DRAGLVGADG TH G +D +
Sbjct: 375 LACEGMKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDIAY 434
Query: 292 MACLPNMVV 300
+ C+PNMV+
Sbjct: 435 LRCIPNMVI 443
>gi|312135104|ref|YP_004002442.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor owensensis
OL]
gi|311775155|gb|ADQ04642.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor owensensis
OL]
Length = 616
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 194/377 (51%), Gaps = 89/377 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+R+ GL E++ DAF GHSSTSIS L G AV RDL ++ +V
Sbjct: 90 TLRKFGGLSGFPKSKESIFDAFDTGHSSTSISVAL----------GFAVARDLENEHYNV 139
Query: 56 ISVIVEGATIARMSYEAINNAGVLN----------------------KALKRLHSNPQFR 93
I+VI +GA ++YE +NNAG N K L ++ + P++
Sbjct: 140 IAVIGDGALTGGLAYEGLNNAGRYNGKLLVILNDNDMSISKNVGAIAKYLSKVRTKPRYF 199
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFF-----EDLGLYYIGPVDGHNL 148
+L + A S + G + +F R+++ + FF E LG Y GP+DGH++
Sbjct: 200 KLKKAADSLVEGIPVVGKNL---SSFVRKVKGSLKYFFFPGTLFEALGFEYYGPIDGHDI 256
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAM-----LPLKLQ----------------QT 187
E L V + VK P VL+HV+T+K + P K +
Sbjct: 257 ERLCEVFESVKDFERP--VLVHVVTQKGRGYEHAERFPEKFHGVPPFDIETGNHLSDNTS 314
Query: 188 RLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+ F ++L ++ M GTGL+ F K +P R FDVGIAE+HAVTFA
Sbjct: 315 KTFSEVLGDKLCELAKNNPKILAITAAMPDGTGLSRFAKMYPQRFFDVGIAEEHAVTFAG 374
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
LA EG KPF AIYS+FLQR FDQ+ HDV LQ L V F +DRAGLVG DG TH G+FD +
Sbjct: 375 ALAKEGFKPFVAIYSTFLQRAFDQIIHDVCLQNLNVVFCVDRAGLVGEDGETHHGSFDIS 434
Query: 291 FMACLPNMVVM--KDIK 305
+++ +PN+ +M KD K
Sbjct: 435 YLSLIPNLTLMVPKDTK 451
>gi|344199834|ref|YP_004784160.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
ferrivorans SS3]
gi|343775278|gb|AEM47834.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
ferrivorans SS3]
Length = 624
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 188/350 (53%), Gaps = 71/350 (20%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D+FG GHSSTSISA L GMAV L K+ V+++I +GA A ++Y
Sbjct: 106 ESPYDSFGAGHSSTSISAAL----------GMAVAAKLGHKSREVVAIIGDGAMTAGLAY 155
Query: 71 EAINNAGVLNKAL------KRLHSNPQFRQLCQ---EAFSSK--DKKQKFGGQ----MHE 115
EA+NN GVL+ L + +P + Q S + + ++ GQ +
Sbjct: 156 EALNNGGVLDANLLVILNDNEMSISPNVGAVSQYLTRILSGRLYNTVREGAGQALSFVPP 215
Query: 116 IDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIH 170
+ +++ E G + FE++G +Y GP+DGH+L+ L L+ +K I P L+H
Sbjct: 216 LRELAKKAEEGVKGLVAPGTLFEEMGFHYFGPIDGHDLDTLIQTLENLKKIRGP--RLLH 273
Query: 171 VITEKEKAMLPLK--------------------------LQQTRLFCKILDNR------- 197
VIT+K K P + T++F L ++
Sbjct: 274 VITKKGKGYGPAEQDPCGYHGVTPFNQTDGKMAKKSAGAASYTQVFGDWLCDKGAAEKQL 333
Query: 198 ------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRC 251
M G+GL F + FP R FDVGIAEQHAVTFAAGLA +G+ P AIYS+FLQR
Sbjct: 334 VAITPAMREGSGLVRFAQLFPERYFDVGIAEQHAVTFAAGLACDGIHPVVAIYSTFLQRA 393
Query: 252 FDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
+DQ+ HDV +Q LPV FAIDRAGLVGADG TH GAFD + C+PN+V+M
Sbjct: 394 YDQLLHDVAIQNLPVLFAIDRAGLVGADGATHQGAFDMAYARCIPNLVIM 443
>gi|258405878|ref|YP_003198620.1| deoxyxylulose-5-phosphate synthase [Desulfohalobium retbaense DSM
5692]
gi|257798105|gb|ACV69042.1| deoxyxylulose-5-phosphate synthase [Desulfohalobium retbaense DSM
5692]
Length = 633
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 186/357 (52%), Gaps = 80/357 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D FGVGHSSTSISA L G+AVGRDL ++N V++VI +G+ A ++Y
Sbjct: 111 ESPYDHFGVGHSSTSISAAL----------GIAVGRDLAQQSNKVLAVIGDGSMTAGLAY 160
Query: 71 EAINNAGVLNKAL------------KRLHSNPQF--RQLCQEAFSSKDKKQKFGGQMHEI 116
E +N AG L++ L K + + F RQL K++ G++ +I
Sbjct: 161 EGLNQAGGLDRDLVVVLNDNEMSISKNVGALSSFLSRQLSSRWLVRF--KRELEGRLRQI 218
Query: 117 D-------AFSREIEAGSRACF-----FEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDP 164
+++ E + F FE Y+GP+DGH+L + V KQV+++ P
Sbjct: 219 PRIGEDLVTYAKRSEESFKGLFTPGMLFEAFKFNYLGPIDGHDLRQMTDVFKQVRSLDGP 278
Query: 165 GAVLIHVITEKEKAMLPLKLQQT---------------------------RLFCKILDN- 196
VL+HV+T+K + P + T ++F + L
Sbjct: 279 --VLVHVLTQKGRGYTPAEDNPTYFHGVGCFEPETGKSKKISSCSLPPYTKVFGRTLSQL 336
Query: 197 ------------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIY 244
M GTGL F + FP R FDVGI EQHAVTFAAGLA EG +PF AIY
Sbjct: 337 ARQNDRIVAITAAMPEGTGLGEFAEEFPDRFFDVGICEQHAVTFAAGLATEGYRPFVAIY 396
Query: 245 SSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
S+FLQR +DQ+ HDV LQ LPV +DR GLVG DG TH GAFD +F+ +PN+ VM
Sbjct: 397 STFLQRSYDQIVHDVCLQNLPVTLCLDRGGLVGEDGATHHGAFDLSFLRHIPNLAVM 453
>gi|222056744|ref|YP_002539106.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter daltonii FRC-32]
gi|221566033|gb|ACM22005.1| deoxyxylulose-5-phosphate synthase [Geobacter daltonii FRC-32]
Length = 636
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/356 (38%), Positives = 183/356 (51%), Gaps = 79/356 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ HDAFG GHSSTSISAGL GMAV L G + VI+VI +G+ M++
Sbjct: 106 ESAHDAFGAGHSSTSISAGL----------GMAVANCLKGDPSKVIAVIGDGSLTGGMAF 155
Query: 71 EAINNAGVLNKALKRLHSNPQF--------------RQLCQEAFSSKDKKQKFGGQMHEI 116
EA+N AG L K L + ++ + R+L + +D K++ + I
Sbjct: 156 EALNQAGHLRKNLVVVLNDNEMSISKNVGALSTFISRKLTGNYY--RDLKKEMQRLLQNI 213
Query: 117 DA-------FSREIEAG-----SRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDP 164
A F+R+ E + FE LG YIGPV GH+L L +++ V+++ P
Sbjct: 214 PAIGGNILHFARKAENSLKGFLTPGTLFEALGFEYIGPVHGHDLPQLIEIMQNVRSLEGP 273
Query: 165 GAVLIHVITEKEKAMLPLKLQQTRL------------------------------FCKIL 194
VL+HV+T K K P + + CK+
Sbjct: 274 --VLVHVVTTKGKGYQPAEDTPDKFHGVGPFDIKTGKVTGGKPGAASYTGIFGDTLCKLA 331
Query: 195 DN---------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS 245
+ M GTGL F + FP R FDVGIAEQHA+TFAAG+A EG +P AIYS
Sbjct: 332 EEDEKIVAITAAMPDGTGLTKFSRTFPDRFFDVGIAEQHALTFAAGMATEGFRPVAAIYS 391
Query: 246 SFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
+F QR +DQ+ HD+ LQKLPV A+DRAGLVG DGPTH G FD +++ LP M VM
Sbjct: 392 TFAQRAYDQIFHDICLQKLPVTLALDRAGLVGDDGPTHHGVFDLSYLRHLPEMTVM 447
>gi|33597052|ref|NP_884695.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella parapertussis
12822]
gi|33600897|ref|NP_888457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella bronchiseptica
RB50]
gi|410420905|ref|YP_006901354.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella bronchiseptica
MO149]
gi|410472461|ref|YP_006895742.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella parapertussis
Bpp5]
gi|412338916|ref|YP_006967671.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella bronchiseptica
253]
gi|427815399|ref|ZP_18982463.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
1289]
gi|427819665|ref|ZP_18986728.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
D445]
gi|41016954|sp|Q7W7Q0.1|DXS_BORPA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|41016955|sp|Q7WL37.1|DXS_BORBR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|33566503|emb|CAE37759.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella parapertussis]
gi|33568497|emb|CAE32409.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
RB50]
gi|408442571|emb|CCJ49122.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella parapertussis
Bpp5]
gi|408448200|emb|CCJ59881.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
MO149]
gi|408768750|emb|CCJ53520.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
253]
gi|410566399|emb|CCN23960.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
1289]
gi|410570665|emb|CCN18858.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
D445]
Length = 620
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/374 (38%), Positives = 193/374 (51%), Gaps = 93/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +RQ G+ E+ +DAFG HSSTSISA L GMAV G
Sbjct: 90 MAHLRQQGGISGFPKRSESEYDAFGTAHSSTSISAAL----------GMAVASRNAGVQR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 140 QHIAVIGDGAMSAGMAFEAMNNAGVTPNINLLVVLNDNDMSISPPVGALNRYLARLMSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K+ + + + +R +E ++ A FE+ G Y+GP+DG
Sbjct: 199 QFYA------AAKNVGRAVLQHVPPVLELARRLEEHAKGMVTPATLFEEFGFNYVGPIDG 252
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++A+P G +HV+T K ++A
Sbjct: 253 HDLDALVPTLQNLRALP--GLQFLHVVTRKGQGYKLAEADPVLYHGPGKFDPAVGIQQAK 310
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P + T++F + L D R+ G G+GL F++ FP R FDVGIAEQHAV
Sbjct: 311 APARKTFTQVFGQWLCDMAERDERLVGITPAMREGSGLVEFEQRFPQRYFDVGIAEQHAV 370
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFAAGLA EG KP AIYS+FLQR +DQ+ HDV LQ L V FA+DRAGLVGADG TH G
Sbjct: 371 TFAAGLACEGQKPVVAIYSTFLQRGYDQLVHDVALQNLDVTFALDRAGLVGADGATHAGN 430
Query: 287 FDTTFMACLPNMVV 300
+D F+ C+PNMVV
Sbjct: 431 YDIAFLRCVPNMVV 444
>gi|398843363|ref|ZP_10600509.1| deoxyxylulose-5-phosphate synthase [Pseudomonas sp. GM102]
gi|398103223|gb|EJL93395.1| deoxyxylulose-5-phosphate synthase [Pseudomonas sp. GM102]
Length = 610
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/349 (40%), Positives = 186/349 (53%), Gaps = 73/349 (20%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +IRQ G+ E+ D FG HSSTSISA L GMA+ +
Sbjct: 89 MASIRQLGGISGFPRRCESPFDTFGTAHSSTSISATL----------GMALAARNQAQPR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQFRQLCQEAFSSKDKK---QKFG 110
H I+VI +GA M+YEA+NNAG L+K L P L S +++
Sbjct: 139 HCIAVIGDGAITGGMAYEAMNNAG-LHKDL------PLLVILNDNDMSISPPVGALREYF 191
Query: 111 GQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIH 170
G++ ++ +G+ A FF+ LG Y GP+DGHNL++L L +K + P L+H
Sbjct: 192 GKLKQMKG------SGTDATFFKALGFNYTGPIDGHNLDELLPALHALKKLRGP--QLLH 243
Query: 171 VITEKEKAMLPL-------------------------KLQQTRLFCKIL------DNR-- 197
++TEK P K T++F L D R
Sbjct: 244 IVTEKGHGYTPAAANPVLYHGPGKFDPAHGIDPAGAGKPTYTQVFGDWLCDEADIDPRVV 303
Query: 198 -----MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCF 252
M G+GL F++ FP R FDVGIAEQHA+TFAAGLAA+GLKP AIYS+FLQR +
Sbjct: 304 TITPAMREGSGLVEFERRFPERYFDVGIAEQHALTFAAGLAADGLKPVVAIYSTFLQRAY 363
Query: 253 DQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DQ+ HD+ +Q LPV FAIDRAG+VGADG TH GAFD ++ C+PN+ VM
Sbjct: 364 DQLIHDIAIQNLPVVFAIDRAGIVGADGATHMGAFDIAYLRCIPNLTVM 412
>gi|427824862|ref|ZP_18991924.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
Bbr77]
gi|410590127|emb|CCN05206.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
Bbr77]
Length = 620
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/374 (38%), Positives = 193/374 (51%), Gaps = 93/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +RQ G+ E+ +DAFG HSSTSISA L GMAV G
Sbjct: 90 MAHLRQQGGISGFPKRSESEYDAFGTAHSSTSISAAL----------GMAVASRNAGVQR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 140 QHIAVIGDGAMSAGMAFEAMNNAGVTPNINLLVVLNDNDMSISPPVGALNRYLARLMSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K+ + + + +R +E ++ A FE+ G Y+GP+DG
Sbjct: 199 QFYA------AAKNVGRAVLQHVPPVLELARRLEEHAKGMVTPATLFEEFGFNYVGPIDG 252
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++A+P G +HV+T K ++A
Sbjct: 253 HDLDALVPTLQNLRALP--GLQFLHVVTRKGQGYKLAEADPVLYHGPGKFDPAVGIQQAK 310
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P + T++F + L D R+ G G+GL F++ FP R FDVGIAEQHAV
Sbjct: 311 APARKTFTQVFGQWLCDMAERDERLVGITPAMREGSGLVEFEQRFPQRYFDVGIAEQHAV 370
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFAAGLA EG KP AIYS+FLQR +DQ+ HDV LQ L V FA+DRAGLVGADG TH G
Sbjct: 371 TFAAGLACEGQKPVVAIYSTFLQRGYDQLVHDVALQNLDVTFALDRAGLVGADGATHAGN 430
Query: 287 FDTTFMACLPNMVV 300
+D F+ C+PNMVV
Sbjct: 431 YDIAFLRCVPNMVV 444
>gi|153853045|ref|ZP_01994454.1| hypothetical protein DORLON_00439 [Dorea longicatena DSM 13814]
gi|149753831|gb|EDM63762.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dorea longicatena DSM
13814]
Length = 620
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/353 (39%), Positives = 182/353 (51%), Gaps = 74/353 (20%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ DAF GHSSTSISAGL G RDL ++ VISVI +G+ M+Y
Sbjct: 103 ESACDAFDTGHSSTSISAGL----------GYVCARDLQKEDYSVISVIGDGSLTGGMAY 152
Query: 71 EAINNAG--------VLNKALKRLHSN----PQFRQLCQEAFSSKDKKQKFGGQMHEI-- 116
EA+NNA VLN + N + + A D K+ +H +
Sbjct: 153 EALNNASRLKKNFIIVLNDNHMSISENVGGMSDYLAKLRTADFYTDLKKGVTNMLHNVPV 212
Query: 117 --DAFSREIEAGSRAC--------FFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGA 166
D I + FFED+G+ Y+GP+ GH++ L LK+ + I P
Sbjct: 213 VGDPMIEHIRKTKSSLKQLIVPGMFFEDMGITYLGPIQGHSIPMLVRALKEARKIEGP-- 270
Query: 167 VLIHVITEKEKAMLPLKLQQ-------------------------TRLFCKILDNR---- 197
VL+HV+T+K K P + Q T +F K++ +
Sbjct: 271 VLLHVLTKKGKGYEPAEEQPDKFHGIGPFQVETGEPEKPKKKDSYTDVFGKVMCDEAARN 330
Query: 198 ---------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 248
M GTGL F+K +P R FDVGIAE+HAVTFAAGLAA G+KP A+YSSFL
Sbjct: 331 DKLAAITAAMADGTGLARFRKKYPNRFFDVGIAEEHAVTFAAGLAAGGMKPVFAVYSSFL 390
Query: 249 QRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
QR +DQ+ HDV LQ LPV FA+DRAGLVG DG TH G FD ++++ +PNMV+M
Sbjct: 391 QRAYDQMIHDVALQNLPVMFAVDRAGLVGNDGETHQGIFDLSYLSSIPNMVIM 443
>gi|404371387|ref|ZP_10976693.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium sp. 7_2_43FAA]
gi|226912484|gb|EEH97685.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium sp. 7_2_43FAA]
Length = 619
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/365 (37%), Positives = 189/365 (51%), Gaps = 81/365 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +DAF GHSSTSISA L GMA RD+ ++N V++VI +GA M+
Sbjct: 106 ESKYDAFDTGHSSTSISAAL----------GMARARDIKNEDNQVVAVIGDGALTGGMAL 155
Query: 71 EAIN----------------------NAGVLNKALKRLHSNPQFRQL---CQEAFSSKDK 105
EA+N N G L+ L L P++ +L E S+ +
Sbjct: 156 EALNDVGFKKTKMIVILNDNQMSISPNVGGLSTHLNNLRMEPRYNKLKSNINETLSNSNA 215
Query: 106 KQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPG 165
+K + ++ S FED+GL YIGP++GH++E + VL++ K I +P
Sbjct: 216 GKKLASCISRFKDSIKQFVVPS--MLFEDMGLKYIGPINGHDIETMTEVLEKAKQIDEP- 272
Query: 166 AVLIHVITEKEK------------------------AMLPLKLQQTRLFCKIL------D 195
V+IHV+T K K A +P + +++F + D
Sbjct: 273 -VIIHVVTSKGKGYELAEKNPNKFHGVSPFDLESGEAYIPSERSYSKVFGDAMLDLAKED 331
Query: 196 NR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 248
R M GTGL F K FP R FDVGIAE HA T AAGLA+ LKP A+YS+FL
Sbjct: 332 ERIVAITAAMPDGTGLKGFAKEFPNRFFDVGIAEAHATTLAAGLASANLKPVFAVYSTFL 391
Query: 249 QRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVV-----MKD 303
QR FDQ+ HDV +Q +PV FAIDRAGLVG DG TH G FD ++++ +PNM V + +
Sbjct: 392 QRAFDQLIHDVCIQNMPVIFAIDRAGLVGEDGETHQGMFDLSYLSQVPNMTVLAPKHLNE 451
Query: 304 IKLVL 308
IK++L
Sbjct: 452 IKVML 456
>gi|197301782|ref|ZP_03166852.1| hypothetical protein RUMLAC_00508 [Ruminococcus lactaris ATCC
29176]
gi|197299222|gb|EDY33752.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruminococcus lactaris ATCC
29176]
Length = 624
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/349 (39%), Positives = 184/349 (52%), Gaps = 74/349 (21%)
Query: 15 DAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSYEAIN 74
DAF GHSSTSISAGL G R+L G ++ V+S+I +G+ M+YEA+N
Sbjct: 108 DAFDTGHSSTSISAGL----------GYVAARELQGGSHSVVSIIGDGSMTGGMAYEALN 157
Query: 75 NAG--------VLNKALKRLHSN----PQFRQ--LCQEAFSS-----KDKKQKFGGQMHE 115
NA VLN + N Q+ +A++ +D +K G+
Sbjct: 158 NASRLKSNFIIVLNDNNMSISENVGGMSQYLNGLRTAQAYTGLKKGVEDTLKKIPGKGDR 217
Query: 116 IDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIH 170
I + ++G + FFED+G+ Y+GPVDGH++ L +L + K + AVL+H
Sbjct: 218 IICHMKRTKSGIKQLFVPGMFFEDMGITYLGPVDGHDIRKLTRILNEAKRVDH--AVLVH 275
Query: 171 VITEKEKAMLPLKLQQTR-------------------------LFCKILDN--------- 196
V+T+K K P + +R +F K+L +
Sbjct: 276 VMTKKGKGYGPAEENPSRFHGTGPFDIPSGMSVGKKATDSYTDVFSKVLADIGKQDEKVV 335
Query: 197 ----RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCF 252
M GTGL F K FP R FDVGIAE+HA+TFAAGLAA G+KP A+YSSFLQR F
Sbjct: 336 AITAAMADGTGLARFAKMFPQRFFDVGIAEEHAMTFAAGLAAGGMKPVFAVYSSFLQRAF 395
Query: 253 DQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DQ HDV LQ LPV A+DRAGLVG+DG TH G FD +F+ +PN+ VM
Sbjct: 396 DQTIHDVCLQNLPVFIAVDRAGLVGSDGETHQGVFDLSFLLEIPNLTVM 444
>gi|241765610|ref|ZP_04763566.1| deoxyxylulose-5-phosphate synthase [Acidovorax delafieldii 2AN]
gi|241364578|gb|EER59638.1| deoxyxylulose-5-phosphate synthase [Acidovorax delafieldii 2AN]
Length = 630
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 191/364 (52%), Gaps = 78/364 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ G+
Sbjct: 93 MSTLRQLGGISGFPQRTESAYDTFGTAHSSTSISAAL----------GMALAAKRKGEER 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHS-------------NPQFRQLCQEAF 100
HV+++I +GA A M++EA+NNAGV + L + + N QL F
Sbjct: 143 HVVAIIGDGAMTAGMAFEALNNAGVADANLLVILNDNDMSISPPVGALNRYLAQLMSGQF 202
Query: 101 --SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAY 153
++K+ + + ++ +E ++ A FE G YIGP+DGH+L+ L
Sbjct: 203 YAAAKNVGKSVLKNAPPLLELAKRLEQQAKGMVVPATLFEKFGFNYIGPIDGHDLDSLIP 262
Query: 154 VLKQVKAIPDPGAVLIHVITEKE--------------------------KAMLPLKLQQT 187
L+ +K + P +HV+T+K K+ K T
Sbjct: 263 TLENIKDLKGP--QFLHVVTKKGQGYKLAEVDPVAYHGPGKFDPAVGLVKSTAAPKQTFT 320
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F + L D+R+ G G+G+ F K FP R +DVGIAEQHAVTFAAG+A
Sbjct: 321 QVFGQWLCDMAEQDDRLVGITPAMREGSGMVEFHKRFPDRYYDVGIAEQHAVTFAAGMAC 380
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+D F+ C
Sbjct: 381 EGVKPVVAIYSTFLQRGYDQMIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIPFVRC 440
Query: 295 LPNM 298
+PNM
Sbjct: 441 IPNM 444
>gi|119897489|ref|YP_932702.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azoarcus sp. BH72]
gi|166198599|sp|A1K4R0.1|DXS_AZOSB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|119669902|emb|CAL93815.1| probable 1-deoxy-D-xylulose 5-phosphate synthase [Azoarcus sp.
BH72]
Length = 619
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 187/357 (52%), Gaps = 85/357 (23%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D FG HSSTSISA L GMAV G++ I+VI +GA A M++
Sbjct: 108 ESEYDTFGTAHSSTSISAAL----------GMAVAARDRGEDRRAIAVIGDGAMSAGMAF 157
Query: 71 EAINNAG----------------------VLNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNAG L K L RL S + +++ +K
Sbjct: 158 EALNNAGDMDANLLVILNDNEMSISPPVGALTKILARLMSGSTYN-------AARRVGEK 210
Query: 109 FGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
G + + +R++E ++ FE+ G +Y GP+DGH+L+ L L+ ++ +
Sbjct: 211 VLGTVPPMAELARKVEEYAKGMIAPGTLFEEFGFHYYGPIDGHDLDALIPTLQNIRKLKG 270
Query: 164 PGAVLIHVITEKEKAML-----PL---------------------KLQQTRLFCKIL--- 194
P +HVIT+K + P+ KL T++F L
Sbjct: 271 P--QFLHVITKKGQGYKLAEADPILYHGVSKFDHTAGIQTGKSGGKLTYTQVFSDWLCDI 328
Query: 195 ---DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIY 244
D R+ G G+GL F + FP R +DVGIAEQHA+TFAAGLA EGLKP AIY
Sbjct: 329 AAADPRIVGITPAMREGSGLVEFAQRFPDRYYDVGIAEQHALTFAAGLACEGLKPVVAIY 388
Query: 245 SSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
S+FLQR +DQ+ HD+ LQ LPV AIDR GLVGADG TH GAFD +F+AC+PN+VVM
Sbjct: 389 STFLQRAYDQLIHDIALQNLPVVLAIDRGGLVGADGATHHGAFDLSFLACVPNLVVM 445
>gi|15602397|ref|NP_245469.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pasteurella multocida
subsp. multocida str. Pm70]
gi|421263265|ref|ZP_15714322.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pasteurella multocida
subsp. multocida str. P52VAC]
gi|13431439|sp|P57848.1|DXS_PASMU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|12720795|gb|AAK02616.1| Dxs [Pasteurella multocida subsp. multocida str. Pm70]
gi|401689775|gb|EJS85152.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pasteurella multocida
subsp. multocida str. P52VAC]
Length = 614
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 185/367 (50%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ G+ E+ D VGHSSTSISAGL G+AV
Sbjct: 91 MSTIRQKNGIHPFPWREESEFDVLSVGHSSTSISAGL----------GIAVAAQRENAGR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
+ VI +GA A M++EA+N+AG L+ + + ++ + R L
Sbjct: 141 KTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSISENVGALNNHLARLLTGSF 200
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA------CFFEDLGLYYIGPVDGHNLEDLA 152
+SS ++ +K M I F ++ E + FE LG YIGP+DGHN+E+L
Sbjct: 201 YSSIREGGKKILSGMPPIKEFVKKTEEHVKGFVSPVGTMFEQLGFNYIGPIDGHNIEELI 260
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPL---------------------KLQQTRLFC 191
LK ++A+ P +H++T+K K P K T +
Sbjct: 261 STLKNMRALKGPQ--FLHIMTKKGKGYAPAEKDPIGFHGVPKFDHLSGQLPKSNTTPTYS 318
Query: 192 KILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
KI + M G+G+ F FP + FDV IAEQHAVTFAAGLA
Sbjct: 319 KIFGDWLCEMAENDPKLIGITPAMREGSGMVEFSNRFPQQYFDVAIAEQHAVTFAAGLAI 378
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
G KP AIYS+FLQR +DQV HDV +Q LPV FAIDRAG+VGADG TH GAFD +F+ C
Sbjct: 379 GGYKPVVAIYSTFLQRAYDQVIHDVAIQNLPVLFAIDRAGVVGADGQTHQGAFDISFLRC 438
Query: 295 LPNMVVM 301
+PNMV+M
Sbjct: 439 IPNMVIM 445
>gi|33593754|ref|NP_881398.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella pertussis
Tohama I]
gi|384205042|ref|YP_005590781.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella pertussis CS]
gi|408414646|ref|YP_006625353.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella pertussis
18323]
gi|41016953|sp|Q7VV87.1|DXS_BORPE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|33563827|emb|CAE43071.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella pertussis
Tohama I]
gi|332383156|gb|AEE68003.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella pertussis CS]
gi|401776816|emb|CCJ62055.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella pertussis
18323]
Length = 620
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/374 (38%), Positives = 193/374 (51%), Gaps = 93/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +RQ G+ E+ +DAFG HSSTSISA L GMAV G
Sbjct: 90 MAHLRQQGGISGFPKRSESEYDAFGTAHSSTSISAAL----------GMAVASRNAGVQR 139
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 140 QHIAVIGDGAMSAGMAFEAMNNAGVTPNINLLVVLNDNDMSISPPVGALNRYLARLMSG- 198
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
QF ++K+ + + + +R +E ++ A FE+ G Y+GP+DG
Sbjct: 199 QFYA------AAKNVGRAVLQHVPPVLELARRLEEHAKGMVTPATLFEEFGFNYVGPIDG 252
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+L+ L L+ ++A+P G +HV+T K ++A
Sbjct: 253 HDLDALVPTLQNLRALP--GLQFLHVVTRKGQGYKLAEADPVLYHGPGKFDPAVGIQQAK 310
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P + T++F + L D R+ G G+GL F++ FP R FDVGIAEQHAV
Sbjct: 311 APARKTFTQVFGQWLCDMAERDERLVGITPAMREGSGLVEFEQRFPQRYFDVGIAEQHAV 370
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFAAGLA EG KP AIYS+FLQR +DQ+ HDV LQ L V FA+DRAGLVGADG TH G
Sbjct: 371 TFAAGLACEGQKPVVAIYSTFLQRGYDQLVHDVALQNLDVTFALDRAGLVGADGATHAGN 430
Query: 287 FDTTFMACLPNMVV 300
+D F+ C+PNMVV
Sbjct: 431 YDIAFLRCVPNMVV 444
>gi|425063219|ref|ZP_18466344.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pasteurella multocida
subsp. gallicida X73]
gi|404382782|gb|EJZ79239.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pasteurella multocida
subsp. gallicida X73]
Length = 614
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 185/367 (50%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ G+ E+ D VGHSSTSISAGL G+AV
Sbjct: 91 MSTIRQKNGIHPFPWREESEFDVLSVGHSSTSISAGL----------GIAVAAQRENAGR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
+ VI +GA A M++EA+N+AG L+ + + ++ + R L
Sbjct: 141 KTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSISENVGALNNHLARLLTGSF 200
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA------CFFEDLGLYYIGPVDGHNLEDLA 152
+SS ++ +K M I F ++ E + FE LG YIGP+DGHN+E+L
Sbjct: 201 YSSIREGGKKILSGMPPIKEFVKKTEEHVKGFVSPVGTMFEQLGFNYIGPIDGHNIEELI 260
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPL---------------------KLQQTRLFC 191
LK ++A+ P +H++T+K K P K T +
Sbjct: 261 STLKNMRALKGPQ--FLHIMTKKGKGYAPAEKDPIGFHGVPKFDHLSGQLPKSNTTPTYS 318
Query: 192 KILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
KI + M G+G+ F FP + FDV IAEQHAVTFAAGLA
Sbjct: 319 KIFGDWLCEMAQNDPKLIGITPAMREGSGMVEFSNRFPQQYFDVAIAEQHAVTFAAGLAI 378
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
G KP AIYS+FLQR +DQV HDV +Q LPV FAIDRAG+VGADG TH GAFD +F+ C
Sbjct: 379 GGYKPVVAIYSTFLQRAYDQVIHDVAIQNLPVLFAIDRAGVVGADGQTHQGAFDISFLRC 438
Query: 295 LPNMVVM 301
+PNMV+M
Sbjct: 439 IPNMVIM 445
>gi|221065760|ref|ZP_03541865.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni KF-1]
gi|220710783|gb|EED66151.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni KF-1]
Length = 622
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 188/364 (51%), Gaps = 78/364 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +D FG HSSTSISA L GMA+ G++
Sbjct: 93 MATLRQFGGLSGFPQRAESEYDTFGTAHSSTSISAAL----------GMALAAKQKGEDR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHS-------------NPQFRQLCQEAF 100
I+VI +GA A M++EA+NN GV + L + + N QL F
Sbjct: 143 RAIAVIGDGAMTAGMAFEALNNGGVHDANLLVILNDNDMSISPPVGALNRYLAQLMSGQF 202
Query: 101 SSK--DKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAY 153
+K D + Q+ + ++ +E ++ A FE G YIGP+DGH+L+ L
Sbjct: 203 YAKARDVGKSVLKQVPPLLELAKRLEQQAKGMVVPATMFEQFGFNYIGPIDGHDLDSLIP 262
Query: 154 VLKQVKAIPDPGAVLIHVITEKE--------------------------KAMLPLKLQQT 187
L+ +K + P +HV+T+K K+ P K T
Sbjct: 263 TLENIKGLKGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLVKSATPAKQTFT 320
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F L D R+ G G+G+ F K FP R +DVGIAEQHAVTFA G+A
Sbjct: 321 QVFGHWLCDMAAKDQRLVGITPAMREGSGMVEFHKRFPGRYYDVGIAEQHAVTFAGGMAC 380
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+D F+ C
Sbjct: 381 EGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAFVRC 440
Query: 295 LPNM 298
+PNM
Sbjct: 441 IPNM 444
>gi|168333590|ref|ZP_02691855.1| deoxyxylulose-5-phosphate synthase [Epulopiscium sp. 'N.t.
morphotype B']
Length = 617
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/361 (37%), Positives = 183/361 (50%), Gaps = 73/361 (20%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
+T+RQ G+ E+ HD F GHSSTSISA L G+A RDL + +
Sbjct: 90 KTLRQFGGISGFIKRQESPHDIFETGHSSTSISAAL----------GIATARDLQNEKFN 139
Query: 55 VISVIVEGATIARMSYEAINNAG--------VLN--------------KALKRLHSNPQF 92
VI+VI +GA M++EA+NNAG VLN K L L +N ++
Sbjct: 140 VIAVIGDGALTGGMAFEALNNAGRSNNNLIVVLNDNEMSISKNVGGISKYLTSLRANQKY 199
Query: 93 RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS--RACFFEDLGLYYIGPVDGHNLED 150
+ + + +K K G + ++++ F+ +G Y GP+DGHN+E
Sbjct: 200 QNVKIKVIRCLEKIPKIGDSLKGTIKYTKDSLKNMVIPETIFDQMGFKYFGPIDGHNVEG 259
Query: 151 LAYVLKQVKAIPDPGAVLIHVIT-------------EKEKAMLPLKLQQTRLFCKIL--- 194
L + Q K I P +LIHV T EK + ++ Q F
Sbjct: 260 LIKIFSQAKTINGP--ILIHVNTIKGKGHYLAEKEPEKYHGVSSVRAQSEYTFSDAFGDA 317
Query: 195 -------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPF 240
D++ M G GL F + FP R FDV IAEQHAVTFAAG+A EG+KP
Sbjct: 318 IVDIAKDDDKIVAITAAMTEGVGLKKFSEKFPKRFFDVAIAEQHAVTFAAGMAIEGIKPV 377
Query: 241 CAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVV 300
AIYSSFLQR +DQ+ HD LQ LPV FAIDRAGLVG DG TH G FD +++ +PNM +
Sbjct: 378 VAIYSSFLQRAYDQILHDCALQNLPVVFAIDRAGLVGEDGQTHQGIFDIAYLSHIPNMTI 437
Query: 301 M 301
+
Sbjct: 438 L 438
>gi|374579596|ref|ZP_09652690.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfosporosinus youngiae
DSM 17734]
gi|374415678|gb|EHQ88113.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfosporosinus youngiae
DSM 17734]
Length = 634
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 187/372 (50%), Gaps = 87/372 (23%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
+TIRQ GL E+ HD+F GHSSTSISA VG A RD+L + +H
Sbjct: 89 KTIRQYKGLSGFPKRGESPHDSFETGHSSTSISAA----------VGFAKARDVLQEKHH 138
Query: 55 VISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQF 92
V++VI +GA M+YEA+N N G ++ L RL ++P +
Sbjct: 139 VVAVIGDGAMTGGMAYEALNHAGHSETNVIVVLNDNEMSISPNVGAMSTYLNRLRTDPMY 198
Query: 93 RQLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
+ ++ + G Q+ ++ D+ + G FE+LG Y+GP+DGH+
Sbjct: 199 DKRKEDLEYLLKRIPGIGNQVAKLASKAKDSLKYLLVPG---LLFEELGFTYLGPIDGHD 255
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------------- 186
+ VL+Q K P VL+HV+T K K P +
Sbjct: 256 QALVEEVLEQAKNKKCP--VLVHVVTRKGKGYKPAEENPDIFHGIGPFDAETGKVTKKPA 313
Query: 187 ----TRLF----CKI---------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
T +F CK+ + M GGTGLN F FP R FDVGIAEQHA+TFA
Sbjct: 314 PPTYTAVFGDTLCKLARENSQIVAITAAMAGGTGLNKFAGEFPERFFDVGIAEQHAITFA 373
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA GLKP AIYSSF QR +DQV HDV LQ V AIDRAG+VG DGPTH G FD
Sbjct: 374 AGLAFGGLKPVVAIYSSFYQRAYDQVLHDVCLQNANVVLAIDRAGVVGDDGPTHHGVFDI 433
Query: 290 TFMACLPNMVVM 301
+F+ +PN+V M
Sbjct: 434 SFLRIIPNLVFM 445
>gi|354598781|ref|ZP_09016798.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brenneria sp. EniD312]
gi|353676716|gb|EHD22749.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brenneria sp. EniD312]
Length = 621
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 189/366 (51%), Gaps = 79/366 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TIRQ GL E+ +D VGHSSTSISAGL GMAV + GK
Sbjct: 97 TIRQKGGLHPFPWRDESEYDVLSVGHSSTSISAGL----------GMAVAAEREGKGRRT 146
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF-- 100
+ VI +GA A M++EA+N+AG VLN + N QL
Sbjct: 147 VCVIGDGAITAGMAFEAMNHAGDIKSDLLVVLNDNEMSISENVGALNNHLAQLLSGKLYA 206
Query: 101 SSKDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAYVL 155
S ++ +K + I R E + FE+LG YIGPVDGH+++ LA L
Sbjct: 207 SLREGGKKVLSGLPPIKELVRRTEEHLKGMVVPGTMFEELGFNYIGPVDGHDVQALAQTL 266
Query: 156 KQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------------TR 188
K ++++ P L+H++T+K K P +L ++
Sbjct: 267 KNMRSLKGP--QLLHIMTKKGKGYAPAELDPISWHAVPKFDPASGTLPKSKDGALPTYSK 324
Query: 189 LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAE 235
+F + L D++ M G+G+ F + +P + FDV IAEQHAVTFAAGLA
Sbjct: 325 IFGQWLRETAAKDSKLMAITPAMREGSGMVQFSREYPQQYFDVAIAEQHAVTFAAGLAVG 384
Query: 236 GLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACL 295
G +P AIYS+FLQR +DQV HDV +Q LPV FAIDR G+VGADG TH GAFD +F+ C+
Sbjct: 385 GYRPVVAIYSTFLQRAYDQVIHDVAIQNLPVLFAIDRGGIVGADGQTHQGAFDLSFLRCI 444
Query: 296 PNMVVM 301
PNMV+M
Sbjct: 445 PNMVIM 450
>gi|452124387|ref|ZP_21936971.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella holmesii F627]
gi|451923617|gb|EMD73758.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella holmesii F627]
Length = 623
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/374 (38%), Positives = 191/374 (51%), Gaps = 93/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M +RQ G+ E+ +DAFG HSSTSISA L GMAV G
Sbjct: 91 MAQLRQQGGISGFPKRSESEYDAFGTAHSSTSISAAL----------GMAVASRNAGVAR 140
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 141 QHIAVIGDGAMSAGMAFEAMNNAGVTPNINLLVILNDNDMSISPPVGALNRYLARLMSGR 200
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDG 145
+ ++K+ + + + +R +E ++ A FE+ G Y+GP+DG
Sbjct: 201 FYA-------TAKNVGRAVLQHVPPVLELARRLEEHAKGMITPATLFEEFGFNYVGPIDG 253
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEK--------------------------EKAM 179
H+LE L L+ +K + G +HV+T K +KA
Sbjct: 254 HDLEALIPTLQNLKTLQ--GLQFLHVVTRKGQGYKLAEADPVLYHGPGKFDPAVGIQKAK 311
Query: 180 LPLKLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
P K T++F + L D R+ G G+GL F+K FP+R FDVGIAEQHAV
Sbjct: 312 TPSKQTFTQVFSQWLCDQAQADVRLVGITPAMREGSGLVEFEKRFPMRYFDVGIAEQHAV 371
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFAAGLA EG KP AIYS+FLQR +DQ+ HDV LQ L V FA+DRAGLVGADG TH G
Sbjct: 372 TFAAGLACEGQKPVVAIYSTFLQRGYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGN 431
Query: 287 FDTTFMACLPNMVV 300
+D F+ C+PNMV+
Sbjct: 432 YDIAFLRCVPNMVI 445
>gi|410693669|ref|YP_003624290.1| 1-deoxy-D-xylulose-5-phosphate synthase
(1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
(DXPS) [Thiomonas sp. 3As]
gi|294340093|emb|CAZ88461.1| 1-deoxy-D-xylulose-5-phosphate synthase
(1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
(DXPS) [Thiomonas sp. 3As]
Length = 637
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 188/370 (50%), Gaps = 83/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MR +RQ G+ E+ DAFG HSSTSISA L GMA+ G+
Sbjct: 92 MRGLRQKGGISGFPRRDESPFDAFGTAHSSTSISAAL----------GMALAAQRKGEAR 141
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
V++VI +GA M++EA+NNAGV LN+ L L S
Sbjct: 142 RVVAVIGDGALTGGMAFEALNNAGVHPEADLLIVLNDNDMSISPPVGALNRHLTGLLSGG 201
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
F A G ++ +++ + A S FE+LG+ Y GP+DGH+L+
Sbjct: 202 LFTAARSTAKQVLSAAPPLLGLARRLEEYAKGLVAPS--PLFEELGVKYFGPIDGHDLDA 259
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKA----------------------MLPLKLQQTR 188
L L ++ + P +L+HV+T+K + + P K +
Sbjct: 260 LIPTLHNLRDMHGP--ILLHVVTKKGQGYKLAEADPVAYHGPGRFDPAVGLAPGKPGKAP 317
Query: 189 LFCKIL----------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
F ++ D R+ G G+GL F + FP R FDVGIAEQHAVTFAAG
Sbjct: 318 TFTQVFGQWLCDMAQADARLVGITPAMREGSGLVEFAERFPQRYFDVGIAEQHAVTFAAG 377
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG+KP AIYS+FLQR +DQV HDV +Q LPV FA+DRAG+VGADG TH GAFD F
Sbjct: 378 LACEGMKPVVAIYSTFLQRGYDQVIHDVAIQNLPVMFAVDRAGVVGADGATHTGAFDIPF 437
Query: 292 MACLPNMVVM 301
+ C+PN+ V+
Sbjct: 438 LRCVPNLSVL 447
>gi|300114036|ref|YP_003760611.1| deoxyxylulose-5-phosphate synthase [Nitrosococcus watsonii C-113]
gi|299539973|gb|ADJ28290.1| deoxyxylulose-5-phosphate synthase [Nitrosococcus watsonii C-113]
Length = 641
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 141/369 (38%), Positives = 192/369 (52%), Gaps = 82/369 (22%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TIRQ GL E+ +D FGVGHSSTSISA L GMA+ G+N
Sbjct: 96 TIRQAGGLAPFPSRHESPYDTFGVGHSSTSISAAL----------GMAIAAREKGENRKT 145
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQF--------RQLCQEAFS 101
+++I +G A M+YEA+++AG L L + +P R L + +S
Sbjct: 146 VAIIGDGGVTAGMAYEALDHAGALGADLLVILNDNEMSISPNVGAISSYLTRLLSGQVYS 205
Query: 102 -----SKDKKQKFGGQMHEIDAFSREIEAGSRA--CFFEDLGLYYIGPVDGHNLEDLAYV 154
SK ++ M E+ + E G A FE++G Y GP+DGH+L L
Sbjct: 206 TVREGSKKVLERMPPAMWELARRTEEHVKGMVAPGTLFEEMGFNYFGPIDGHDLNSLIRT 265
Query: 155 LKQVKAIPDPGAVLIHVITEKEKAML-----------------PLKLQQ----------- 186
L+ + + P L+H++T K K + +QQ
Sbjct: 266 LRNLHKLAGP--RLLHIVTCKGKGYTLAEENPVTYHGVNPFDPKVGIQQGSQKKPSSAMS 323
Query: 187 -TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGL 232
T++F + L D+R+ G G+GL F + FP R FDV IAEQH+VT AAG+
Sbjct: 324 YTQVFSQWLCDMAAQDDRLMGITPAMREGSGLVKFSECFPKRYFDVAIAEQHSVTLAAGM 383
Query: 233 AAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 292
A +GLKP AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAG+VG DGPTH G+FD T++
Sbjct: 384 ACDGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGVVGPDGPTHAGSFDLTYL 443
Query: 293 ACLPNMVVM 301
C+PN+VVM
Sbjct: 444 RCVPNLVVM 452
>gi|237747172|ref|ZP_04577652.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes
HOxBLS]
gi|229378523|gb|EEO28614.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes
HOxBLS]
Length = 615
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 188/368 (51%), Gaps = 82/368 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+T+RQ G+ E+ +DAFG HSSTSISA L GMA+ L +N
Sbjct: 88 MKTLRQLNGISGFPKRDESQYDAFGTAHSSTSISAAL----------GMALAARLKNENY 137
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN----------------KALKRLHSNPQFRQLCQ 97
I+VI +GA M++EA+NN G+ N A+ L+S F +L
Sbjct: 138 TSIAVIGDGAITGGMAFEAMNNVGMYNDINLLVILNDNDMSISPAVGALNS--YFARLMS 195
Query: 98 EAFSSKDK---KQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLEDLA 152
F + K K G M EI E G + A FE+ G Y+GP+DGH+LE L
Sbjct: 196 GKFYATAKNVGKTVLRGPMLEIAKRFEEHAKGLIAPATLFEEFGFNYVGPIDGHDLESLI 255
Query: 153 YVLKQVKAIPDPGAVLIHVITEK----------------------EKAMLPLKLQQTRLF 190
L+ +K P +H++T+K E+ + P + + +
Sbjct: 256 PTLQNLKERKGPQ--FLHIVTKKGHGYKLAEADPVLYHGLGKFSPEEGIKPAPVSKPT-Y 312
Query: 191 CKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+I N M G+G+ F K +P R FDVGIAEQHAVTFAAGLA
Sbjct: 313 AEIFGNWLCDTAAVNQKLVGITPAMREGSGMVRFAKTYPDRFFDVGIAEQHAVTFAAGLA 372
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
EGLKP AIYS+FLQR +DQ+ HDV LQ L V FA+DRAGLVGADG TH G +D ++
Sbjct: 373 CEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDMAYLR 432
Query: 294 CLPNMVVM 301
C+PNMV+M
Sbjct: 433 CIPNMVIM 440
>gi|294501199|ref|YP_003564899.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacillus megaterium QM
B1551]
gi|294351136|gb|ADE71465.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacillus megaterium QM
B1551]
Length = 633
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 183/373 (49%), Gaps = 89/373 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TIRQ GL E+ HD + GHSSTS+SA + GMA RDL H+
Sbjct: 89 TIRQYKGLCGFPKRDESEHDVWETGHSSTSLSAAM----------GMAAARDLQKTKAHI 138
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
+ +I +GA M+ EA+N N G ++ L RL + ++
Sbjct: 139 VPIIGDGALTGGMALEALNHIGHEQTDMTVILNDNEMSIAPNVGAVHSILGRLRTAGKYN 198
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNL 148
+ E K GG++ A + ++ G + FFEDLG Y+GPVDGH+
Sbjct: 199 WVKDELEVLLKKVPAVGGKLA---ATAERVKDGLKYMVVSGMFFEDLGFTYLGPVDGHSY 255
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP--------------------------- 181
+DL L+ K P VLIHVIT+K K LP
Sbjct: 256 DDLLETLQYAKKTKGP--VLIHVITKKGKGYLPAESDKSGAWHGTGPYKIESGDFIKDKN 313
Query: 182 LKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
+ + ++L + D+R M G+ L FQK FP R FDVGIAEQHA T
Sbjct: 314 VPIAWSKLVSDTVLKMAREDDRIVAVTPAMPVGSKLEAFQKEFPHRMFDVGIAEQHATTM 373
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLA + +KPF AIYS+FLQR +DQV HD+ QKL V IDRAGLVGADG TH G FD
Sbjct: 374 AAGLATQNMKPFLAIYSTFLQRAYDQVVHDICRQKLNVFIGIDRAGLVGADGETHQGVFD 433
Query: 289 TTFMACLPNMVVM 301
F+ LPN+V+M
Sbjct: 434 IAFLRHLPNLVIM 446
>gi|302871911|ref|YP_003840547.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor
obsidiansis OB47]
gi|302574770|gb|ADL42561.1| deoxyxylulose-5-phosphate synthase [Caldicellulosiruptor
obsidiansis OB47]
Length = 616
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 193/377 (51%), Gaps = 89/377 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+R+ GL E++ DAF GHSSTSIS L G AV RDL ++ +V
Sbjct: 90 TLRKFGGLSGFPKSKESIFDAFDTGHSSTSISVAL----------GFAVARDLENEHYNV 139
Query: 56 ISVIVEGATIARMSYEAINNAGVLN----------------------KALKRLHSNPQFR 93
I+VI +GA ++YE +NNAG N K L ++ + P++
Sbjct: 140 IAVIGDGALTGGLAYEGLNNAGRYNGKLLVILNDNDMSISKNVGAIAKYLSKVRTKPRYF 199
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFF-----EDLGLYYIGPVDGHNL 148
+L + A S + G + F R+++ + FF E LG Y GP+DGH++
Sbjct: 200 KLKKAADSLVEGIPVIGKNLSR---FVRKVKGSLKYFFFPGTLFEALGFEYYGPIDGHDI 256
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAM-----LPLKLQ----------------QT 187
E L V + VK P VL+HV+T+K + P K +
Sbjct: 257 ERLCEVFESVKDFERP--VLVHVVTQKGRGYEHAERFPEKFHGVPPFDIETGNHLSDNTS 314
Query: 188 RLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+ F ++L ++ M GTGL+ F K +P R FDVGIAE+HAVTFA
Sbjct: 315 KTFSEVLGDKLCELAKNNPKILAITAAMPDGTGLSRFAKMYPQRFFDVGIAEEHAVTFAG 374
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
LA EG KPF AIYS+FLQR FDQ+ HDV LQ L V F +DRAGLVG DG TH G+FD +
Sbjct: 375 ALAKEGFKPFVAIYSTFLQRAFDQIIHDVCLQNLNVVFCVDRAGLVGEDGETHHGSFDIS 434
Query: 291 FMACLPNMVVM--KDIK 305
+++ +PN+ +M KD K
Sbjct: 435 YLSLIPNLTLMVPKDTK 451
>gi|189500755|ref|YP_001960225.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chlorobium
phaeobacteroides BS1]
gi|189496196|gb|ACE04744.1| deoxyxylulose-5-phosphate synthase [Chlorobium phaeobacteroides
BS1]
Length = 659
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 193/375 (51%), Gaps = 86/375 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T R+ GL E+ HDAFG GH+STSISA A + L G N+
Sbjct: 100 MHTNRKFNGLAGFPKISESAHDAFGTGHASTSISAAAGI----------AAAKKLSGSND 149
Query: 54 HVISVIVEGATIARMSYEAINNAG-VLNKALKRLHSN-----PQFRQLCQEAFSSKDKKQ 107
VI+VI +G+ M++EA+N+ G + + L L+ N P L + K
Sbjct: 150 KVIAVIGDGSMTGGMAFEAMNHLGDIKSDVLVVLNDNQMAISPSTGGLKNYLVNITLNKT 209
Query: 108 KFGGQMHEIDAFS--------------REIEAGSRAC-----FFEDLGLYYIGPVDGHNL 148
+ D+ S R+IE G +A FFE LG Y GP+DGHN
Sbjct: 210 YNKARKFIWDSLSLLNNDLGETAKNAVRKIEDGIKAALTPGAFFEALGFRYFGPIDGHNT 269
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR-------------------- 188
E L ++++ +P P L+H+IT K K P + Q++
Sbjct: 270 EQLVKAFREMQELPHPK--LLHIITTKGKGFKPAEDDQSKWHASSGGFDITTGKSLKKSG 327
Query: 189 ---------LFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAV 226
+F L D+R+ G GT L++FQK P R +DVGIAEQHAV
Sbjct: 328 IAQPPKYQDIFGAALAELADSDHRITGITAAMSSGTSLDIFQKAHPERFYDVGIAEQHAV 387
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFAAG+AA G KPFCAIYS+FLQR +DQ+ HDV LQKLPV FAIDRAGLVG DGPTH G+
Sbjct: 388 TFAAGMAANGYKPFCAIYSTFLQRAYDQLIHDVALQKLPVVFAIDRAGLVGEDGPTHHGS 447
Query: 287 FDTTFMACLPNMVVM 301
FD +F+ +P MV+M
Sbjct: 448 FDLSFLRPIPGMVIM 462
>gi|428781127|ref|YP_007172913.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dactylococcopsis salina
PCC 8305]
gi|428695406|gb|AFZ51556.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dactylococcopsis salina
PCC 8305]
Length = 637
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 182/374 (48%), Gaps = 88/374 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+ D FG GH+STSISAGL GMA+ RD G+N V
Sbjct: 89 TLRQKDGIAGYLKRCESQFDHFGAGHASTSISAGL----------GMALARDAKGENFKV 138
Query: 56 ISVIVEGATIARMSYEAIN-----------------------NAGVLNKALKRLHSNPQF 92
+S+I +GA M+ EAIN N G +++ L ++ +P
Sbjct: 139 VSIIGDGALTGGMALEAINHAGHIPDTNLMVVLNDNEMSISPNVGAISRYLNKVRLSPPM 198
Query: 93 RQLCQEAFSSKDKKQKFGGQ-----MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
Q + + K F G+ M + + + E+LG Y GP+DGHN
Sbjct: 199 -QFLTDNLEEQFKHLPFFGESLTPEMERMKEGMKRLAVPKVGAVIEELGFKYFGPIDGHN 257
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAM-----------------------LPLKL 184
L +L + +Q +P P VL+HV T K K P
Sbjct: 258 LTELIHTFQQAHQVPGP--VLVHVATTKGKGYSIAEKDQVGYHAQSAFNIATGKAQPSSK 315
Query: 185 QQTRLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
+ +CK+ + M GTGL+ Q+ P + DVGIAEQHAVT
Sbjct: 316 PKPPKYCKVFAHTLTQLAENNPKIIGITAAMATGTGLDKLQQKLPDQYVDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
AAGLA EG++P AIYS+FLQR +DQ+ HDV +Q LPV F +DRAG+VGADGPTH G +
Sbjct: 376 LAAGLACEGMRPVAAIYSTFLQRAYDQIIHDVCIQNLPVFFCLDRAGIVGADGPTHQGMY 435
Query: 288 DTTFMACLPNMVVM 301
D ++ CLPNMV+M
Sbjct: 436 DIAYLRCLPNMVIM 449
>gi|288940188|ref|YP_003442428.1| deoxyxylulose-5-phosphate synthase [Allochromatium vinosum DSM 180]
gi|288895560|gb|ADC61396.1| deoxyxylulose-5-phosphate synthase [Allochromatium vinosum DSM 180]
Length = 634
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/367 (39%), Positives = 192/367 (52%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FGVGHSSTSISA L GMA+ G+
Sbjct: 103 MCTLRQKDGISGFPKRGESEYDTFGVGHSSTSISAAL----------GMALAAKQRGERR 152
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLH------SNPQFRQLCQEA 99
VI++I +GA A M++EA+N+AG +LN + SN R L +
Sbjct: 153 TVIAIIGDGALGAGMAFEALNHAGSMDIDLVVILNDNEMSISPPVGAISNHLARLLSGKL 212
Query: 100 FSS--KDKKQKFGG--QMHEIDAFSREIEAGS--RACFFEDLGLYYIGPVDGHNLEDLAY 153
++S + K G Q+ + E G + FE+LG YIGPVDGH+++ L
Sbjct: 213 YTSVREGSKHALAGMPQLRHLVGRWEEHMKGMLMPSTLFEELGFNYIGPVDGHDMDGLLR 272
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ--------------------------T 187
L+ +K +P G L+H++T+K + P + Q T
Sbjct: 273 TLRNIKDMP--GQRLLHIVTKKGRGFEPAEGQPVIYHGVTPFDRQTGQLLKAKGAGPTYT 330
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F L D R+ G G+GL F K FP R FDVGIAEQHAVT AAGLA
Sbjct: 331 QIFGGWLHDTAAADPRLVGITPAMCEGSGLTAFSKRFPERYFDVGIAEQHAVTLAAGLAC 390
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EGLKP AIYSSFLQR +DQ+ HDV LQ L V FA+DR GLVGADG TH G FD +F
Sbjct: 391 EGLKPVVAIYSSFLQRAYDQLVHDVALQNLDVTFAVDRGGLVGADGATHAGGFDLSFCRP 450
Query: 295 LPNMVVM 301
+PN+V+M
Sbjct: 451 IPNLVIM 457
>gi|392553126|ref|ZP_10300263.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoalteromonas spongiae
UST010723-006]
Length = 621
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 188/367 (51%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D F VGHSSTSISA L GMA+ + G++
Sbjct: 95 MHTIRQKDGLHPFPFREESEYDTFSVGHSSTSISAAL----------GMALASEKEGQDR 144
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHS-------------NPQFRQLCQEAF 100
V++VI +GA A M++EA+N+AG LN + + + N F ++ +F
Sbjct: 145 KVVAVIGDGAITAGMAFEAMNHAGDLNPDMLVILNDNEMSISENVGALNNHFARILSGSF 204
Query: 101 SS--KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
+ ++ +K M + + +E + FFE+LG YIGP+DGH++ L
Sbjct: 205 YTNIREGGKKLLSGMPPVKELASRMEEHLKGMVIPGTFFEELGFNYIGPIDGHDVGMLTD 264
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAM----------------------LPLKLQQTRLFC 191
L+ ++ + P L+HV T+K K LP F
Sbjct: 265 TLRNMRNLKGP--QLLHVRTQKGKGYKPAEADPIGYHGVPKFDPSETSLPKSKPSAPTFS 322
Query: 192 KILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
K+ + M G+G+ F K FP + +D IAEQHAVT AGLA
Sbjct: 323 KVFGDWLCDMAAKDPKLMAITPAMREGSGMVRFSKEFPSQYYDAAIAEQHAVTLGAGLAC 382
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EGL P AIYSSFLQR +DQ+ HDV LQ LPV FAIDRAG+VGADG TH GA+D ++M C
Sbjct: 383 EGLTPVVAIYSSFLQRGYDQLIHDVALQNLPVMFAIDRAGVVGADGETHQGAYDLSYMRC 442
Query: 295 LPNMVVM 301
+PNMV+M
Sbjct: 443 IPNMVIM 449
>gi|398832980|ref|ZP_10591126.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum sp. YR522]
gi|398222367|gb|EJN08744.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum sp. YR522]
Length = 636
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 186/371 (50%), Gaps = 88/371 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+ G +
Sbjct: 102 MSSLRQQDGISGFPRRDESDYDTFGTAHSSTSISAAL----------GMALAARTQGSDR 151
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
H I+VI +GA A M++EA+NNAGV LN+ L RL S
Sbjct: 152 HAIAVIGDGAMTAGMAFEALNNAGVHDDVNLLVILNDNDMSISPPVGALNRYLARLMSGK 211
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS--RACFFEDLGLYYIGPVDGHNL 148
+ A + K G + E+ E G A FE+ G YIGP+DGH+L
Sbjct: 212 FY------AKARDVGKSVLPGPVLELAKRLEEHAKGMVVPATMFEEFGFNYIGPIDGHDL 265
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKE-------------------------KAMLPLK 183
+ L L+ +K + P +HV+T K K K
Sbjct: 266 DSLIPTLQNLKQLKGP--QFLHVVTRKGQGYKLAEADPVLYHGPGKFNPSEGIKPSTSSK 323
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T++F + L D R G G+G+ F+K FP R +DVGIAEQHAVTFAA
Sbjct: 324 ATYTQVFGEWLCDMAGADQRAVGITPAMREGSGMVAFEKQFPQRYYDVGIAEQHAVTFAA 383
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG+KP AIYS+FLQR +DQ+ HDV LQ L V FA+DRAGLVGADG TH G +D
Sbjct: 384 GMACEGMKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDLA 443
Query: 291 FMACLPNMVVM 301
F+ C+PNMVVM
Sbjct: 444 FLRCIPNMVVM 454
>gi|253681596|ref|ZP_04862393.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum D
str. 1873]
gi|253561308|gb|EES90760.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium botulinum D
str. 1873]
Length = 619
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 189/355 (53%), Gaps = 80/355 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D F GHSSTSISA L GMA RDL G+ ++VI+VI +GA M+
Sbjct: 106 ESKYDFFETGHSSTSISAAL----------GMARARDLKGEKHNVIAVIGDGALTGGMAI 155
Query: 71 EAIN----------------------NAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+N N G ++ L R+ +P++ + + F+ +K
Sbjct: 156 EALNDVGDKKTNLIIILNDNQMSIGKNVGGVSTYLSRIRIDPKYNKFKSD-FNDILRKTN 214
Query: 109 FGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
G + D+ S+ I++G + FFE++G+ Y+GP+DGHN+ +L V+ K I
Sbjct: 215 IGNGVA--DSISK-IKSGIKQILVPGMFFEEMGIKYLGPIDGHNIRELTKVMTMAKEIKG 271
Query: 164 PGAVLIHVITEKEKA-------------MLPLKLQQTRL-------FCKIL--------- 194
P VLIH IT+K K + L ++ + K
Sbjct: 272 P--VLIHTITQKGKGYKFAEKDPDMFHGIGAFNLDTGKVSKISGDTYSKAFGSSIVELAK 329
Query: 195 -DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSS 246
DNR+ G GTGL F + FP R FDVGIAEQHAVT AAG+A EGLKP A+YS+
Sbjct: 330 EDNRVIGITAAMRDGTGLREFSEKFPKRFFDVGIAEQHAVTLAAGMAREGLKPIFAVYST 389
Query: 247 FLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
FLQR +DQV HDV Q LPV FAIDRAG+VG+DG TH G FD +F+ +PNM +M
Sbjct: 390 FLQRAYDQVIHDVCHQNLPVIFAIDRAGIVGSDGETHQGIFDLSFLNHMPNMTIM 444
>gi|154502460|ref|ZP_02039520.1| hypothetical protein RUMGNA_00273 [Ruminococcus gnavus ATCC 29149]
gi|153796856|gb|EDN79276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruminococcus gnavus ATCC
29149]
Length = 624
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/349 (39%), Positives = 182/349 (52%), Gaps = 74/349 (21%)
Query: 15 DAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSYEAIN 74
DAF GHSSTSISAGL G RD+ G+ + VIS+I +GA M+YEA+N
Sbjct: 108 DAFDTGHSSTSISAGL----------GYVAARDIKGEEHSVISIIGDGAMTGGMAYEALN 157
Query: 75 NAG--------VLNKALKRLHSN--PQFRQL----CQEAFSS-----KDKKQKFGGQMHE 115
NA VLN + N R L EA++ +D K Q +
Sbjct: 158 NASRLKSNFIIVLNDNNMSISENVGGMSRYLNGLRTAEAYTGLKKGVEDTLMKIPVQGEK 217
Query: 116 IDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIH 170
I ++ ++G + FFED+G+ Y+GPVDGH++ L ++ K + AVL+H
Sbjct: 218 ILYQMKKTKSGLKQLFVPGMFFEDMGITYLGPVDGHDIRKLYKTFQEAKRVDH--AVLVH 275
Query: 171 VITEKEKAMLPLKLQQTR-----------------------------LFCKI-------- 193
V+T+K K P + +R +FC I
Sbjct: 276 VLTKKGKGYGPAEENPSRFHGIVPFDIETGEAKEKSSKDSYTDIFSKVFCDIAKQNDAVV 335
Query: 194 -LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCF 252
+ M GTGL F + FP R FDVGIAE+HA+TFAAGLAA GLKP A+YSSFLQR F
Sbjct: 336 GITAAMADGTGLARFARMFPDRFFDVGIAEEHALTFAAGLAAGGLKPVVAVYSSFLQRAF 395
Query: 253 DQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DQ HDV LQ LPV A+DRAGLVG+DG TH G FD +F+ +PNM ++
Sbjct: 396 DQAIHDVCLQNLPVMIAVDRAGLVGSDGETHQGLFDLSFLNMIPNMTIL 444
>gi|417853150|ref|ZP_12498572.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pasteurella multocida
subsp. gallicida str. Anand1_poultry]
gi|338215433|gb|EGP01710.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pasteurella multocida
subsp. gallicida str. Anand1_poultry]
Length = 569
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/367 (37%), Positives = 189/367 (51%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ G+ E+ D VGHSSTSISAGL G+AV
Sbjct: 46 MSTIRQKNGIHPFPWREESEFDVLSVGHSSTSISAGL----------GIAVAAQRENAGR 95
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
+ VI +GA A M++EA+N+AG L+ + + ++ + R L
Sbjct: 96 KTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSISENVGALNNHLARLLTGSF 155
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA------CFFEDLGLYYIGPVDGHNLEDLA 152
+SS ++ +K M I F ++ E + FE LG YIGP+DGHN+E+L
Sbjct: 156 YSSIREGGKKILSGMPPIKEFVKKTEEHVKGFVSPVGTMFEQLGFNYIGPIDGHNIEELI 215
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------T 187
LK ++A+ P +H++T+K K P + +
Sbjct: 216 STLKNMRALKGPQ--FLHIMTKKGKGYAPAEKDPIGFHGVPKFDHLSGQLPKSNTTPTYS 273
Query: 188 RLF----CKILDN---------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F C+I +N M G+G+ F FP + FDV IAEQHAVTFAAGLA
Sbjct: 274 KIFGDWLCEIAENDPKLIGITPAMREGSGMVEFSNRFPQQYFDVAIAEQHAVTFAAGLAI 333
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
G KP AIYS+FLQR +DQ+ HDV +Q LPV FAIDRAG+VGADG TH GAFD +F+ C
Sbjct: 334 GGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGVVGADGQTHQGAFDISFLRC 393
Query: 295 LPNMVVM 301
+PNMV+M
Sbjct: 394 IPNMVIM 400
>gi|440680572|ref|YP_007155367.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anabaena cylindrica PCC
7122]
gi|428677691|gb|AFZ56457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anabaena cylindrica PCC
7122]
Length = 636
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 183/374 (48%), Gaps = 88/374 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ EN D FG GH+STSISA L GMA+ RDL G+
Sbjct: 89 TLRQKDGVAGYLKRCENKFDHFGAGHASTSISAAL----------GMALARDLKGEKFKA 138
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKA-----------------------LKRLHSNPQF 92
++VI +GA M+ EAIN+AG L K L ++ +P
Sbjct: 139 VAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPNVGAIPRYLNKMRLSPPV 198
Query: 93 RQLCQEAFSSKDKKQKFGGQ-----MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
Q ++ F + K F G+ + I + + FE+LG Y+GPVDGHN
Sbjct: 199 -QFIKDNFEEQVKHIPFVGESLSPELDRIKEGMKRLAVPKVGAVFEELGFTYMGPVDGHN 257
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAM-----------------------LPLKL 184
LE+L +Q + P VL+HV+T K K +P
Sbjct: 258 LEELIATFQQAHQMTGP--VLVHVVTTKGKGYEIAEKDQVGYHAQNPFNVSTGKAIPSNK 315
Query: 185 QQTRLFCKILDNR-----------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
+ + K+ + M GTGL+ Q P + DVGIAEQHA+T
Sbjct: 316 PKPPAYAKVFSHTLVKLAEQNPKIVGITAAMATGTGLDKLQTKLPNQYIDVGIAEQHAIT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
AAGLA EG++P AIYS+FLQR +DQ+ HDV +Q LPV F +DRAG+VGADGPTH G +
Sbjct: 376 LAAGLACEGMRPVAAIYSTFLQRAYDQIIHDVCIQNLPVFFCLDRAGIVGADGPTHQGMY 435
Query: 288 DTTFMACLPNMVVM 301
D ++ C+PNMVVM
Sbjct: 436 DIAYLRCIPNMVVM 449
>gi|418531678|ref|ZP_13097589.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni
ATCC 11996]
gi|371451180|gb|EHN64221.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni
ATCC 11996]
Length = 622
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 187/364 (51%), Gaps = 78/364 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +D FG HSSTSISA L GMA+ G++
Sbjct: 93 MGTLRQFGGLSGFPQRAESEYDTFGTAHSSTSISAAL----------GMALAAKQKGEDR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHS-------------NPQFRQLCQEAF 100
I+VI +GA A M++EA+NN GV + L + + N QL F
Sbjct: 143 RAIAVIGDGAMTAGMAFEALNNGGVHDANLLVILNDNDMSISPPVGALNRYLAQLMSGQF 202
Query: 101 SSK--DKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAY 153
+K D + Q+ + ++ +E ++ A FE G YIGP+DGH+L+ L
Sbjct: 203 YAKARDVGKSVLKQVPPLLELAKRLEQQAKGMVVPATMFEQFGFNYIGPIDGHDLDSLIP 262
Query: 154 VLKQVKAIPDPGAVLIHVITEKE--------------------------KAMLPLKLQQT 187
L+ +K + P +HV+T+K K P K T
Sbjct: 263 TLENIKGLKGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLVKPATPAKQTFT 320
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F L D R+ G G+G+ F K FP R +DVGIAEQHAVTFA G+A
Sbjct: 321 QVFGHWLCDMAAKDQRLVGITPAMREGSGMVEFHKRFPGRYYDVGIAEQHAVTFAGGMAC 380
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+D F+ C
Sbjct: 381 EGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAFVRC 440
Query: 295 LPNM 298
+PNM
Sbjct: 441 IPNM 444
>gi|398807912|ref|ZP_10566782.1| 1-deoxy-D-xylulose-5-phosphate synthase [Variovorax sp. CF313]
gi|398088543|gb|EJL79101.1| 1-deoxy-D-xylulose-5-phosphate synthase [Variovorax sp. CF313]
Length = 618
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 140/366 (38%), Positives = 193/366 (52%), Gaps = 78/366 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ G++
Sbjct: 89 MPTLRQIGGISGFPQRTESEYDTFGTAHSSTSISAAL----------GMAMAAKQKGEDR 138
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQ------------FRQLCQEAF 100
H +++I +GA A M++EA+NNAGV + K L L+ N QL F
Sbjct: 139 HAVAIIGDGALTAGMAFEALNNAGVCDCKLLVILNDNDMSISPPVGALNRYLAQLMSGNF 198
Query: 101 --SSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAY 153
++K + + ++ +E ++ A FE G Y+GP+DGH+L+ L
Sbjct: 199 YAAAKSVGKSVLRNAPPLFELAKRLEQHAKGMVVPATLFEQFGFNYVGPIDGHDLDSLVP 258
Query: 154 VLKQVKAIPDPGAVLIHVITEKE--------------------------KAMLPLKLQQT 187
L+ +K + P +HV+T+K K+ +K T
Sbjct: 259 TLENLKHLEGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPQVGLVKSAAVVKQTFT 316
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F + L D R+ G G+GL F+K FP R +DVGIAEQHAVTFAAGLA
Sbjct: 317 QVFGQWLCDTAAADGRLVGITPAMREGSGLVEFEKRFPDRYYDVGIAEQHAVTFAAGLAC 376
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EGLKP AIYS+FLQR +DQ+ HDV +Q LPV FA+DRAGLVGADG TH GA+D F+ C
Sbjct: 377 EGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVVFALDRAGLVGADGATHAGAYDIPFLRC 436
Query: 295 LPNMVV 300
+PNM +
Sbjct: 437 IPNMSI 442
>gi|88799590|ref|ZP_01115166.1| 1-deoxy-D-xylulose-5-phosphate synthase [Reinekea blandensis
MED297]
gi|88777675|gb|EAR08874.1| 1-deoxy-D-xylulose-5-phosphate synthase [Reinekea sp. MED297]
Length = 626
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 186/373 (49%), Gaps = 91/373 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+ TIRQ GL E+ +D FGVGHSSTSISA L GMA+ G
Sbjct: 101 LPTIRQEGGLHAFPHRGESEYDTFGVGHSSTSISAAL----------GMAIADRRKGNAR 150
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
++VI +GA A M++EA+N N G LNKA R+ S+
Sbjct: 151 QTVAVIGDGALTAGMAFEALNHAGHDGANMLVVLNDNDMSISENVGALNKAFARVFSSKT 210
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGH 146
+ L ++ +K + + F+R+ E + FE+LG Y+GPVDGH
Sbjct: 211 YSHL-------RENSKKVLKNLPPMLEFARKAEEHMKGMVAPGTLFEELGFNYVGPVDGH 263
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPL------------------------ 182
++ DL L+ ++ P +HV T+K K +P
Sbjct: 264 DVIDLVQTLQNIRTFSGPQ--FLHVATQKGKGFIPAENEPIKYHAITKIEPQSEQAGAAA 321
Query: 183 -KLQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
K + + +F + L D R+ G G+ L F +P R DV IAEQHAVT
Sbjct: 322 AKPKYSNVFGQWLCDMAARDERLLGVTPAMREGSDLVAFSSLYPERYHDVAIAEQHAVTV 381
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
A G+A EG+KP AIYS+FLQR +DQ+ HD+ LQ L V FAIDRAGLVG DGPTH G+FD
Sbjct: 382 AGGMACEGMKPVVAIYSTFLQRAYDQLIHDIALQNLDVLFAIDRAGLVGEDGPTHAGSFD 441
Query: 289 TTFMACLPNMVVM 301
T++ C+PNMVVM
Sbjct: 442 YTYLRCIPNMVVM 454
>gi|419839194|ref|ZP_14362612.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
HK386]
gi|386909905|gb|EIJ74569.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
HK386]
Length = 621
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 183/368 (49%), Gaps = 79/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ G+ E+ D VGHSSTSISAGL G+AV + +
Sbjct: 91 MSTIRQKDGIHPFPWREESEFDVLSVGHSSTSISAGL----------GIAVAAERENASR 140
Query: 54 HVISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQ 91
+ VI +GA A M++EA+N N G LN L R+ S
Sbjct: 141 KTVCVIGDGAITAGMAFEALNHAGSVHTDMLVILNDNEMSISENVGALNNHLARIFSGSI 200
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDL 151
+ L + DK M + + + + + FE+LG YIGPVDGHN+++L
Sbjct: 201 YSTLRDGSKKILDKVPPVKNFMKKTEEHMKGVMFSPESTLFEELGFNYIGPVDGHNIDEL 260
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAMLP-------------------------LKLQQ 186
L ++ + P +H+ T+K K P K
Sbjct: 261 VATLTNMRNLKGPQ--FLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKHNTKPTY 318
Query: 187 TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
+++F L D+++ G G+G+ F + FP + FDV IAEQHAVTFA GLA
Sbjct: 319 SKIFGDWLCEMAEKDSKIIGITPAMREGSGMVEFSQRFPEQYFDVAIAEQHAVTFATGLA 378
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
G KP AIYS+FLQR +DQ+ HDV +Q LPV FAIDRAG+VGADGPTH GAFD +FM
Sbjct: 379 IGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGPTHQGAFDLSFMR 438
Query: 294 CLPNMVVM 301
C+PNM++M
Sbjct: 439 CIPNMIIM 446
>gi|384044956|ref|YP_005492973.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacillus megaterium
WSH-002]
gi|345442647|gb|AEN87664.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacillus megaterium
WSH-002]
Length = 633
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 182/373 (48%), Gaps = 89/373 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TIRQ GL E+ HD + GHSSTS+SA + GMA RDL H+
Sbjct: 89 TIRQYKGLCGFPKRDESEHDVWETGHSSTSLSAAM----------GMAAARDLQKTKAHI 138
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
+ +I +GA M+ EA+N N G ++ L RL + ++
Sbjct: 139 VPIIGDGALTGGMALEALNHIGHEQTDMTVILNDNEMSIAPNVGAVHSILGRLRTAGKYN 198
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNL 148
+ E K GG++ A + ++ G + FFEDLG Y+GPVDGH+
Sbjct: 199 WVKDELEVLLKKVPAVGGKLA---ATAERVKDGLKYMVVSGMFFEDLGFTYLGPVDGHSY 255
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP--------------------------- 181
+DL L+ K P VLIHVIT+K K LP
Sbjct: 256 DDLLETLQYAKKTKGP--VLIHVITKKGKGYLPAESDKSGAWHGTGPYKIESGDFIKDKN 313
Query: 182 LKLQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
+ + ++L + D R M G+ L FQK FP R FDVGIAEQHA T
Sbjct: 314 VPIAWSKLVSDTVLKMAREDERIVAVTPAMPVGSKLEAFQKEFPHRMFDVGIAEQHATTM 373
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLA + +KPF AIYS+FLQR +DQV HD+ QKL V IDRAGLVGADG TH G FD
Sbjct: 374 AAGLATQNMKPFLAIYSTFLQRAYDQVVHDICRQKLNVFIGIDRAGLVGADGETHQGVFD 433
Query: 289 TTFMACLPNMVVM 301
F+ LPN+V+M
Sbjct: 434 IAFLRHLPNLVIM 446
>gi|264679658|ref|YP_003279565.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni CNB-2]
gi|262210171|gb|ACY34269.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni CNB-2]
Length = 622
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 187/364 (51%), Gaps = 78/364 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +D FG HSSTSISA L GMA+ G++
Sbjct: 93 MGTLRQFGGLSGFPQRAESEYDTFGTAHSSTSISAAL----------GMALAAKQKGEDR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHS-------------NPQFRQLCQEAF 100
I+VI +GA A M++EA+NN GV + L + + N QL F
Sbjct: 143 RAIAVIGDGAMTAGMAFEALNNGGVHDANLLVILNDNDMSISPPVGALNRYLAQLMSGQF 202
Query: 101 SSK--DKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAY 153
+K D + Q+ + ++ +E ++ A FE G YIGP+DGH+L+ L
Sbjct: 203 YAKARDVGKSVLKQVPPLLELAKRLEQQAKGMVVPATMFEQFGFNYIGPIDGHDLDSLIP 262
Query: 154 VLKQVKAIPDPGAVLIHVITEKE--------------------------KAMLPLKLQQT 187
L+ +K + P +HV+T+K K P K T
Sbjct: 263 TLENIKGLKGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLVKPATPAKQTFT 320
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F L D R+ G G+G+ F K FP R +DVGIAEQHAVTFA G+A
Sbjct: 321 QVFGHWLCDMAAKDQRLVGITPAMREGSGMVEFHKRFPGRYYDVGIAEQHAVTFAGGMAC 380
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+D F+ C
Sbjct: 381 EGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAFVRC 440
Query: 295 LPNM 298
+PNM
Sbjct: 441 IPNM 444
>gi|152979790|ref|YP_001352021.1| 1-deoxy-D-xylulose-5-phosphate synthase [Janthinobacterium sp.
Marseille]
gi|151279867|gb|ABR88277.1| 1-deoxy-D-xylulose-5-phosphate synthase [Janthinobacterium sp.
Marseille]
Length = 621
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 186/371 (50%), Gaps = 88/371 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M ++RQ G+ E+ +D FG HSSTSISA L GMA+ G++
Sbjct: 88 MHSLRQIDGISGFPRRDESPYDTFGTAHSSTSISAAL----------GMALAAKTKGEDR 137
Query: 54 HVISVIVEGATIARMSYEAINNAGV-----------------------LNKALKRLHSNP 90
H I+VI +GA A M++EA+NNAG+ LN+ L RL S
Sbjct: 138 HAIAVIGDGAMTAGMAFEAMNNAGIHDDINLLVVLNDNDMSISPPVGALNRYLARLMSG- 196
Query: 91 QFRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGS--RACFFEDLGLYYIGPVDGHNL 148
QF + K M E+ E G A FE+ G YIGP+DGH+L
Sbjct: 197 QFYAAAKNV-----GKTVLPAPMRELAKRFEEHAKGMIVPATMFEEFGFNYIGPIDGHDL 251
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKE-------------------------KAMLPLK 183
+ L L+ +K + P +HV+T K K K
Sbjct: 252 DSLIPTLQNLKNLKGP--QFLHVVTRKGQGYKLAEADPVLYHGPGKFDPAEGIKPSTAKK 309
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
+ T +F L D R+ G G+G+ F++ FP R +DVGIAEQHAVTFAA
Sbjct: 310 VTYTSVFGDWLCDMAAADKRLVGITPAMREGSGMVEFERRFPDRYYDVGIAEQHAVTFAA 369
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EGLKP AIYS+FLQR +DQ+ HDV LQ L V FA+DR+GLVGADG TH G +D
Sbjct: 370 GMACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLDVTFALDRSGLVGADGATHAGNYDIA 429
Query: 291 FMACLPNMVVM 301
++ C+PNMVVM
Sbjct: 430 YLRCIPNMVVM 440
>gi|451936472|ref|YP_007460326.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777395|gb|AGF48370.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 620
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 136/367 (37%), Positives = 192/367 (52%), Gaps = 79/367 (21%)
Query: 1 MRTIRQTCG-------LENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G LE+ +DAFG HSSTSISA L GMAV +
Sbjct: 90 MNTLRQYNGISGFPNRLESCYDAFGTAHSSTSISAAL----------GMAVAARAFNIDR 139
Query: 54 HVISVIVEGATIARMSYEAINNAG---------VLNKALKRLHS-----NPQFRQLCQEA 99
+ I+++ +GA + MS+EA+NNA +LN + N F QL
Sbjct: 140 NNIAIVGDGAISSGMSFEALNNANNIKDINLTVILNDNHMSISEPVGSLNNYFSQLMNGR 199
Query: 100 FSSKDKK--QKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLA 152
F +K K + + + ++ +E+ ++ FE+ G Y GP++GHN++DL
Sbjct: 200 FYAKAKNVGKVVLKHIPSVLKLAKSLESHAKDIIKTNIIFEEFGFKYFGPINGHNIDDLI 259
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAM-------------------LPLKLQQ---TRLF 190
Y L +V++ P G L+H++T+K K +KL + T+ F
Sbjct: 260 YELNKVRSCP--GLKLLHIVTKKGKGYKLAEKDPILYHGPGKFNINTGIKLTEKNITKTF 317
Query: 191 CKIL----------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
I DNR M G+GL F++ FP R FDVGI+EQHA+TFAAG++
Sbjct: 318 TNIFSEWICDMARSDNRLIAITPAMSEGSGLVKFEELFPERYFDVGISEQHAITFAAGMS 377
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
EGLKP AIYS+FLQR +DQ HDV +Q L V FA+DRAG+VG+DGPTH G +D F+
Sbjct: 378 CEGLKPVVAIYSTFLQRGYDQFIHDVAIQNLDVTFALDRAGIVGSDGPTHAGNYDIAFLR 437
Query: 294 CLPNMVV 300
C+P MV+
Sbjct: 438 CIPGMVI 444
>gi|398818520|ref|ZP_10577106.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus sp. BC25]
gi|398027533|gb|EJL21081.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus sp. BC25]
Length = 628
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 180/366 (49%), Gaps = 79/366 (21%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ GL E+ HD + GHSSTS+SA + GMA RDL + NHV
Sbjct: 89 TLRQYKGLCGFPKMVESPHDVWETGHSSTSLSAAM----------GMATARDLKKEKNHV 138
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
I+VI +GA M+ EA+N N G L+ L ++ S ++
Sbjct: 139 IAVIGDGALTGGMALEALNHIGHERKNVIVVLNDNEMSIAPNVGALHNYLGKIRSTENYQ 198
Query: 94 QLCQEAFSSKDKKQKFGGQM-HEIDAFSREIE-AGSRACFFEDLGLYYIGPVDGHNLEDL 151
E GG++ H + F ++ FE+LG YIGP+DGHN+E L
Sbjct: 199 WAKDEVEGLLKSIPAVGGKLAHMAERFKDSMKYLLVSGVLFEELGFTYIGPIDGHNMELL 258
Query: 152 AYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-----------------------TR 188
LK K P VLIH IT+K P + T
Sbjct: 259 LDTLKTAKHTKGP--VLIHAITKKGLGYAPAEADSVKWHGIGTYKIESGDTPKSAPTYTS 316
Query: 189 LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAE 235
+F + DN M G+GL F + +P R FDVGIAEQHA TFAAGLA +
Sbjct: 317 VFADTMMKLADEDNSIVAVTPAMPAGSGLIPFGQKYPDRLFDVGIAEQHACTFAAGLATQ 376
Query: 236 GLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACL 295
GLKP AIYS+FLQR +DQ+ HDV QKL V FA+DRAGLVGADG TH G +D FM +
Sbjct: 377 GLKPVFAIYSTFLQRAYDQLIHDVARQKLNVIFAVDRAGLVGADGETHQGMYDVAFMRII 436
Query: 296 PNMVVM 301
PNMV+M
Sbjct: 437 PNMVIM 442
>gi|358067020|ref|ZP_09153506.1| 1-deoxy-D-xylulose-5-phosphate synthase [Johnsonella ignava ATCC
51276]
gi|356694869|gb|EHI56524.1| 1-deoxy-D-xylulose-5-phosphate synthase [Johnsonella ignava ATCC
51276]
Length = 620
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 185/356 (51%), Gaps = 80/356 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ DAF GHSSTSISAGL G+A RDL+GK+ V+S+I +GA M+Y
Sbjct: 104 ESPCDAFNTGHSSTSISAGL----------GIAQARDLMGKDYKVVSIIGDGALTGGMAY 153
Query: 71 EAINNA----------------------GVLNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNA G ++ L + + + L + S+ +K
Sbjct: 154 EALNNAARMKKNFIIVLNDNSMSISRNVGGMSNYLNGIRTANFYNNLKKNVQSTLEKLPL 213
Query: 109 FGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
G + ID+ + + G + FE++G+ Y+GPVDGHN L VL + K +
Sbjct: 214 LGKPV--IDSI-KYTKNGIKQFLIPGMLFENMGIIYLGPVDGHNTMQLCKVLNEAKKLDL 270
Query: 164 PGAVLIHVITEKEKAMLP-------------------------LKLQQTRLFCKIL---- 194
+VL+HVIT K K P K T +F L
Sbjct: 271 --SVLVHVITRKGKGYRPAEENPEKFHGVGAFNIATGKPLKEKTKPDYTDVFADKLCELA 328
Query: 195 --DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS 245
D R M GTGL F K +P R FDVGIAEQHAVT AAG+A+ GLKP AIYS
Sbjct: 329 KKDKRITAITAAMPDGTGLAKFGKLYPKRFFDVGIAEQHAVTLAAGMASAGLKPVAAIYS 388
Query: 246 SFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
SFLQR FDQV HDV +Q L V FAIDRAGLVGADG TH G FD ++++C+PNM +M
Sbjct: 389 SFLQRGFDQVLHDVCIQNLNVVFAIDRAGLVGADGETHQGIFDLSYLSCIPNMSIM 444
>gi|299533200|ref|ZP_07046584.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni
S44]
gi|298718730|gb|EFI59703.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni
S44]
Length = 622
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 187/364 (51%), Gaps = 78/364 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ +D FG HSSTSISA L GMA+ G++
Sbjct: 93 MGTLRQFGGLSGFPQRAESEYDTFGTAHSSTSISAAL----------GMALAAKQKGEDR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHS-------------NPQFRQLCQEAF 100
I+VI +GA A M++EA+NN GV + L + + N QL F
Sbjct: 143 RAIAVIGDGAMTAGMAFEALNNGGVHDANLLVILNDNDMSISPPVGALNRYLAQLMSGQF 202
Query: 101 SSK--DKKQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLAY 153
+K D + Q+ + ++ +E ++ A FE G YIGP+DGH+L+ L
Sbjct: 203 YAKARDVGKSVLKQVPPLLELAKRLEQQAKGMVVPATMFEQFGFNYIGPIDGHDLDSLIP 262
Query: 154 VLKQVKAIPDPGAVLIHVITEKE--------------------------KAMLPLKLQQT 187
L+ +K + P +HV+T+K K P K T
Sbjct: 263 TLENIKGLKGP--QFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLVKPATPAKQTFT 320
Query: 188 RLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
++F L D R+ G G+G+ F K FP R +DVGIAEQHAVTFA G+A
Sbjct: 321 QVFGHWLCDMAAKDQRLVGITPAMREGSGMVEFHKRFPGRYYDVGIAEQHAVTFAGGMAC 380
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EG+KP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+D F+ C
Sbjct: 381 EGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAFVRC 440
Query: 295 LPNM 298
+PNM
Sbjct: 441 IPNM 444
>gi|261416041|ref|YP_003249724.1| deoxyxylulose-5-phosphate synthase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372497|gb|ACX75242.1| deoxyxylulose-5-phosphate synthase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 622
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 192/371 (51%), Gaps = 85/371 (22%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ G+ E+V+D FG GH++TSISA L G AV RD +NN+V
Sbjct: 89 TLRQQGGISGFLKRNESVYDCFGAGHATTSISAAL----------GFAVARDHFNRNNNV 138
Query: 56 ISVIVEGATIARMSYEAINNAG--------VLN--------------KALKRLHSNPQFR 93
++VI +G+ M+YEAINN G +LN K L R+ SNP +
Sbjct: 139 VAVIGDGSMTGGMAYEAINNVGASKQNMTIILNDNKMSIAPNIGGFSKYLNRVISNPVYN 198
Query: 94 QLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRAC----FFEDLGLYYIGPVDGHNLE 149
++ + ++ G D F + A A FFEDLG+ Y GP+DGH+++
Sbjct: 199 KMRTDLDRLMNRLPGILGSRFR-DLFLQVENAAKNAVKPGRFFEDLGIRYFGPIDGHDID 257
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAM---------------------LPL-----K 183
+L +L++VK G L+HV+TEK + LPL
Sbjct: 258 ELVMILERVKQ--QQGPCLVHVLTEKGRGFDAAEKNPTKYHGCGAFDPESGLPLAPGNPN 315
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T +F L D R+ G G G+++ K P R DVGIAE+HAVTFAA
Sbjct: 316 PSLTSVFGNTLLQLARKDKRIMGITAAMPTGCGMDIVAKELPDRVIDVGIAEEHAVTFAA 375
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A +G+ P AIYSSF+QR +DQ+ HD+ LQ L V +DRAGLVGADGPTH GAFD +
Sbjct: 376 GMACDGVVPVVAIYSSFMQRAYDQIIHDIALQNLHVVLVLDRAGLVGADGPTHHGAFDLS 435
Query: 291 FMACLPNMVVM 301
F+ +P M ++
Sbjct: 436 FLRTVPGMTIL 446
>gi|387129646|ref|YP_006292536.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophaga sp. JAM7]
gi|386270935|gb|AFJ01849.1| 1-deoxy-D-xylulose 5-phosphate synthase [Methylophaga sp. JAM7]
Length = 610
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 187/360 (51%), Gaps = 71/360 (19%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ GL E+ D+FGVGHSSTS+SA L GMA+
Sbjct: 92 MHTMRQADGLSGFPKRSESPFDSFGVGHSSTSVSAAL----------GMALAAQSNQDAR 141
Query: 54 HVISVIVEGATIARMSYEAINNAG--------VLNKALKRLHSN-----PQFRQLCQEAF 100
+++I +GA A +YEA+ +AG VLN + N +L F
Sbjct: 142 RAVAIIGDGALTAGQAYEALAHAGDLSANLLVVLNDNEMSISRNVGGMANYLARLLSSRF 201
Query: 101 --SSKDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
S+++ +K ++ +R E + FE++G YIGP+DGHNL+ L
Sbjct: 202 YTSAREGSKKVLEKIPSAWEIARRAEEHMKGMVVPGTLFEEMGFNYIGPIDGHNLDTLIT 261
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------TRLFCKIL 194
L ++ P +H++T+K K P + + T++F L
Sbjct: 262 TLGNLRNCKGP--QFLHIVTKKGKGFTPAEQEPCKYHGVSPAGGKSSAGKSYTQVFSDWL 319
Query: 195 ------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFC 241
D ++ G G+GLN F + FP R FDVGIAEQHAVT AAGLA E KP
Sbjct: 320 VDMAVADKQLIGITPAMCEGSGLNRFAERFPDRYFDVGIAEQHAVTLAAGLACENKKPVV 379
Query: 242 AIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADGPTH G+FD T++ C+PNM++M
Sbjct: 380 AIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGLVGADGPTHAGSFDLTYLRCIPNMLIM 439
>gi|384085057|ref|ZP_09996232.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
thiooxidans ATCC 19377]
Length = 624
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/350 (38%), Positives = 187/350 (53%), Gaps = 71/350 (20%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D+FG GHSSTSISAGL GMAV L + V+++I +GA A M+Y
Sbjct: 106 ESPYDSFGAGHSSTSISAGL----------GMAVAAKLKKNDREVVAIIGDGAMTAGMAY 155
Query: 71 EAINNAGVLNKAL------KRLHSNPQF--------RQLCQEAFSS-KDKKQKFGGQMHE 115
EA+NN GVL+ L + +P R L +++ +D + +
Sbjct: 156 EALNNGGVLDANLLVVLNDNEMSISPNVGAVSQYLTRILSGRLYNTVRDGAGQALSLVPP 215
Query: 116 IDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIH 170
+ +++ E G + FE++G Y GP+DGH+L+ L L+ +K I P L+H
Sbjct: 216 LRELAKKAEEGVKGLVTPGTLFEEMGFNYFGPIDGHDLDALIPTLENLKKIKGP--RLLH 273
Query: 171 VITEKEKAMLPLKLQQ--------------------------TRLFCKILDNR------- 197
V+T+K K P + T++F L ++
Sbjct: 274 VMTKKGKGYGPAEEDPCGYHGVTPFNQSDGQMAKKAGGPPSYTKVFGDWLCDKGAAESSL 333
Query: 198 ------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRC 251
M G+GL F++ +P R +DVGIAEQHAVTFAAG+A +G+ P AIYS+FLQR
Sbjct: 334 VAITPAMREGSGLVRFEQLYPERYYDVGIAEQHAVTFAAGMACDGIHPVVAIYSTFLQRA 393
Query: 252 FDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
+DQ+ HDV +Q LPV FAIDRAGLVGADG TH GAFD + C+PN+VVM
Sbjct: 394 YDQLLHDVAIQNLPVLFAIDRAGLVGADGATHQGAFDMAYARCIPNLVVM 443
>gi|153004003|ref|YP_001378328.1| deoxyxylulose-5-phosphate synthase [Anaeromyxobacter sp. Fw109-5]
gi|166198596|sp|A7H9E8.1|DXS_ANADF RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
synthase; Short=DXPS
gi|152027576|gb|ABS25344.1| deoxyxylulose-5-phosphate synthase [Anaeromyxobacter sp. Fw109-5]
Length = 635
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 185/370 (50%), Gaps = 83/370 (22%)
Query: 2 RTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNH 54
RTIR GL E+ HDAFGVGH+ST+ISA L GM + L G
Sbjct: 90 RTIRTEGGLAGFPERHESEHDAFGVGHASTAISAAL----------GMLEAKRLSGAPGK 139
Query: 55 VISVIVEGATIARMSYEAINNAGVLNKAL------KRLHSNPQFRQLCQEAFSSKDKKQK 108
V++++ +GA +++E +N AG L + L + +P L E FS K +
Sbjct: 140 VVALVGDGAMTGGVAFEGLNQAGYLGRDLVVVLNDNEMSISPNVGAL-SEWFSKKFASRT 198
Query: 109 FGGQMHEIDAFSREIEAGSRAC------------------FFEDLGLYYIGPVDGHNLED 150
+ + F + G A FE LG +Y+GPVDGH++
Sbjct: 199 YNRWRRAVKDFLSHVPKGPEAIDMIRHGINATKALVTPGILFEGLGFHYVGPVDGHDVRS 258
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L L+++ P VL+H IT K K P + +
Sbjct: 259 LVETLQKLVIFDGP--VLLHAITTKGKGYQPAESDKATRGHGLSFFDVATGKPVKKAAAK 316
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T LF + L D R M GTGL ++ FP R +DVGIAEQHAVTFAAG
Sbjct: 317 AYTDLFAEALCEEMERDPRVVAITAAMLEGTGLIKAKQRFPERTYDVGIAEQHAVTFAAG 376
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG++P AIYS+FLQR +D++ HDV LQ+LPV FA+DR GLVGADG TH GAFD +
Sbjct: 377 LACEGVRPVVAIYSTFLQRAYDEIIHDVALQRLPVTFALDRGGLVGADGKTHQGAFDVAY 436
Query: 292 MACLPNMVVM 301
+ C+PN+VVM
Sbjct: 437 LRCVPNLVVM 446
>gi|388567038|ref|ZP_10153477.1| 1-deoxy-d-xylulose-5-phosphate synthase [Hydrogenophaga sp. PBC]
gi|388265743|gb|EIK91294.1| 1-deoxy-d-xylulose-5-phosphate synthase [Hydrogenophaga sp. PBC]
Length = 635
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 191/369 (51%), Gaps = 80/369 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQ G+ E+ +D FG HSSTSISA L GMA+ G++
Sbjct: 93 MDTLRQLGGISGFPRRDESPYDTFGTAHSSTSISAAL----------GMAMAAKAKGEDR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQ------------FRQLCQEAF 100
+++I +GA A M++EA+NNAGV + K L L+ N QL F
Sbjct: 143 RAVAIIGDGAMTAGMAFEALNNAGVADGKLLVILNDNDMSISPPVGALNRYLAQLMSGQF 202
Query: 101 SSKDK---KQKFGGQMHEIDAFSREIEAGSR-----ACFFEDLGLYYIGPVDGHNLEDLA 152
+ K KQ G + ++ E ++ A FE G YIGP+DGH+L+ L
Sbjct: 203 YAAAKHMGKQVLKGAPPLFE-LAKRFEQQAKGMVVPATLFEKFGFNYIGPIDGHDLDSLI 261
Query: 153 YVLKQVKAIPDP--GAVLIHVITEK--------------------------EKAMLPLKL 184
L+ ++ + D G +HV+T+K K P K
Sbjct: 262 PTLENIRQLMDAHEGPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLTKPATPPKT 321
Query: 185 QQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T++F + L D R+ G G+G+ F++ FP R FDVGIAEQHAVTFAAG
Sbjct: 322 TFTQVFGQWLCDMAAADQRLVGITPAMREGSGMVEFERRFPDRYFDVGIAEQHAVTFAAG 381
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EGLKP AIYS+FLQR +DQ+ HDV LQ LPV FA+DRAGLVGADG TH GA+D +
Sbjct: 382 LACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDVAY 441
Query: 292 MACLPNMVV 300
+ C+P + V
Sbjct: 442 LRCIPQVSV 450
>gi|333370563|ref|ZP_08462558.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desmospora sp. 8437]
gi|332977572|gb|EGK14342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desmospora sp. 8437]
Length = 628
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 138/372 (37%), Positives = 184/372 (49%), Gaps = 88/372 (23%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
T+RQ GL E+ HD + GHSSTS+SA + GMAV RDL G+++ V
Sbjct: 89 TLRQYKGLCGFPKMAESEHDIWETGHSSTSLSAAM----------GMAVARDLKGEDHRV 138
Query: 56 ISVIVEGATIARMSYEAIN----------------------NAGVLNKALKRLHSNPQFR 93
I +I +GA M+ EA+N N G ++ L +L ++ +
Sbjct: 139 IPIIGDGALTGGMALEALNHIGNEKRNIMVILNDNEMSISPNVGAIHNYLGKLRTHRHYH 198
Query: 94 QLCQEAFSSKDKKQKFGGQMHEI-----DAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+L +E K GG D+ + +G FE LG Y+GPV GHNL
Sbjct: 199 KLKEEVEYFLKKIPSVGGAFATAAERIKDSMKFLVVSG---VLFEKLGFTYLGPVSGHNL 255
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRL------------------- 189
++L L+ P VL+HV+T K K LP + Q +
Sbjct: 256 DELMECLRLADQTKGP--VLVHVVTVKGKGYLPAEAQAEKFHGVSKGYKLEANKEAKKET 313
Query: 190 ---FCKIL----------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+ K+ D R M GG+G+N F FP RCFDVGIAEQHA TFA
Sbjct: 314 PVKYAKVFGDTLIQLAETDKRVVGVTPAMLGGSGMNEFASKFPDRCFDVGIAEQHAGTFA 373
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA +G+KP AIYS+FLQR +DQV HD+ Q L V A+DRAG VGADG TH G +D
Sbjct: 374 AGLATQGMKPVLAIYSTFLQRAYDQVIHDIARQNLNVVLAVDRAGFVGADGETHQGIYDI 433
Query: 290 TFMACLPNMVVM 301
++ C+PN+VVM
Sbjct: 434 AYLRCIPNLVVM 445
>gi|410626498|ref|ZP_11337259.1| 1-deoxy-D-xylulose-5-phosphate synthase [Glaciecola mesophila KMM
241]
gi|410154037|dbj|GAC24028.1| 1-deoxy-D-xylulose-5-phosphate synthase [Glaciecola mesophila KMM
241]
Length = 621
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 188/367 (51%), Gaps = 78/367 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQ GL E+ +D F VGHSSTSISA VGMAV +
Sbjct: 95 MPTIRQKNGLHPFPWPNESEYDTFAVGHSSTSISAA----------VGMAVAAEKEALGR 144
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
V++VI +GA A M++EA+N+ G ++K + + ++ + R L
Sbjct: 145 KVVAVIGDGAMTAGMAFEALNHGGDIDKDMLVILNDNEMSISENVGALNSHLARLLTGNF 204
Query: 100 FSS-KDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAY 153
F+S +D +K + I F+ E + FE+LG YIGP+DGH++ +
Sbjct: 205 FNSIRDGGKKLLSSVPPIKEFASRAEEHIKGMVVPGTIFEELGFNYIGPIDGHDVNGVVD 264
Query: 154 VLKQVKAIPDPGAVLIHVITEKEKAML-----PLKLQQT--------------------- 187
LK ++ I GA ++HV+T+K K P+K
Sbjct: 265 TLKNMRNIK--GAQILHVVTKKGKGYELAEKDPIKFHAVPKFNPSADGLPKAAPSDPTFS 322
Query: 188 ----RLFCKI---------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA 234
R C + + M G+G+ F + FP + FDV IAEQHAVTFAAGLA
Sbjct: 323 NIFGRWLCDMAQQDPNLMAVTPAMREGSGMVEFSQKFPEQYFDVAIAEQHAVTFAAGLAK 382
Query: 235 EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMAC 294
EG AIYS+FLQR +DQ+ HDV LQ LPV FAIDRAGLVGADGPTH GA+D F+ C
Sbjct: 383 EGQNAVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGLVGADGPTHQGAYDIPFLRC 442
Query: 295 LPNMVVM 301
+PNMV+M
Sbjct: 443 IPNMVIM 449
>gi|197119726|ref|YP_002140153.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter bemidjiensis
Bem]
gi|197089086|gb|ACH40357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter bemidjiensis
Bem]
Length = 635
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 138/355 (38%), Positives = 178/355 (50%), Gaps = 79/355 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ HDAFGVGHSSTSISAGL GMAV + L VISVI +G+ M++
Sbjct: 106 ESPHDAFGVGHSSTSISAGL----------GMAVAQGLKEDAARVISVIGDGSLTGGMAF 155
Query: 71 EAINNAGVLNKAL----------------------KRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+N AG L K L R + +R L +E +
Sbjct: 156 EALNQAGHLKKNLIVVLNDNEMSISKNVGALSSFISRKMTGGYYRSLKKEMEALMANIPA 215
Query: 109 FGGQMHEIDAFSREIEAG-----SRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPD 163
GG I F+++ E + FE LG Y+GP+ GH+L L VL+ VK +
Sbjct: 216 IGGN---ILHFAKKAENSLKGFLTPGTLFEGLGFEYVGPIAGHDLPTLLGVLENVKRLEG 272
Query: 164 PGAVLIHVITEKEKAMLPLKLQQTRL--------------------FCKILDNRM----- 198
P +L+HV+T+K K P + + + + N M
Sbjct: 273 P--ILLHVMTKKGKGYPPAETMPDKFHGVAPTKPASASPAKLPPPSYTSVFGNTMVKLGE 330
Query: 199 ------------GGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSS 246
GTGL F + FP R FDVGIAEQHA+TFAAGLA EG +P AIYS+
Sbjct: 331 IDPKILAITAAMPDGTGLTPFAERFPDRFFDVGIAEQHALTFAAGLAVEGFRPVAAIYST 390
Query: 247 FLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
F QR +DQ+ HDV LQKLPV A+DRAGLVG DGPTH G+FD +++ LP + VM
Sbjct: 391 FTQRAYDQIFHDVCLQKLPVTLALDRAGLVGDDGPTHHGSFDISYLRHLPELTVM 445
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.140 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,752,370,793
Number of Sequences: 23463169
Number of extensions: 198083315
Number of successful extensions: 524226
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5262
Number of HSP's successfully gapped in prelim test: 1072
Number of HSP's that attempted gapping in prelim test: 504000
Number of HSP's gapped (non-prelim): 11413
length of query: 309
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 167
effective length of database: 9,027,425,369
effective search space: 1507580036623
effective search space used: 1507580036623
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 76 (33.9 bits)