BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041265
(309 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6YU51|DXS2_ORYSJ Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os07g0190000 PE=2
SV=1
Length = 713
Score = 347 bits (891), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 194/382 (50%), Positives = 233/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M TIRQT GL E+ HDAFG GHSSTSISA L GMAV RDLLGK N
Sbjct: 155 MHTIRQTSGLAGFPKRDESAHDAFGAGHSSTSISAAL----------GMAVARDLLGKKN 204
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
HVISVI +GA A +YEA+NN+G L+KA
Sbjct: 205 HVISVIGDGAMTAGQAYEAMNNSGYLDSNMIVVLNDNKQVSLPTATLDGPATPVGALSKA 264
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI----DAFSREIEAGSRACFFEDLGLY 138
L +L S+ + R+L + A K ++ GGQ HE+ D ++R + + S + FE+LGLY
Sbjct: 265 LTKLQSSTKLRRLREAA---KTVTKQIGGQAHEVAAKVDEYARGMVSASGSTLFEELGLY 321
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------- 183
YIGPVDGH+++DL + +VK++P PG VL+H++TEK K P +
Sbjct: 322 YIGPVDGHSVDDLVAIFNKVKSMPAPGPVLVHIVTEKGKGYPPAEAAADRMHGVVKFDPT 381
Query: 184 -----------LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
L T+ F + L D++ MGGGTGLN F K FP RCFDVG
Sbjct: 382 TGRQFKSKCSTLSYTQYFAEALIREAEADDKVVGIHAAMGGGTGLNYFHKRFPERCFDVG 441
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR +DQV HDVDLQ+LPVRFA+DRAGLVGAD
Sbjct: 442 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFAMDRAGLVGAD 501
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD +MACLPNMVVM
Sbjct: 502 GPTHCGAFDVAYMACLPNMVVM 523
>sp|Q38854|DXS_ARATH 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic
OS=Arabidopsis thaliana GN=DXS PE=1 SV=2
Length = 717
Score = 342 bits (876), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 194/382 (50%), Positives = 231/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ HD FG GHSST+ISAGL GMAVGRDL GKNN
Sbjct: 161 MPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGL----------GMAVGRDLKGKNN 210
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 211 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSA 270
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SNP R+L + A K ++ GG MH+ +D ++R + +G+ + FE+LGLY
Sbjct: 271 LSRLQSNPALRELREVA---KGMTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLY 327
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+VK+ G VLIHV+TEK + P
Sbjct: 328 YIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGVVKFDPA 387
Query: 183 KLQQ----------TRLFCKIL-------------DNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q T F + L MGGGTGLNLFQ+ FP RCFDVG
Sbjct: 388 TGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVG 447
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 448 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 507
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNM+VM
Sbjct: 508 GPTHCGAFDVTFMACLPNMIVM 529
>sp|O78328|DXS_CAPAN Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic
OS=Capsicum annuum GN=TKT2 PE=2 SV=1
Length = 719
Score = 333 bits (854), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 190/382 (49%), Positives = 228/382 (59%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D FG GHSST+ISAGL GMAVGRDL G+NN
Sbjct: 160 MSTLRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGL----------GMAVGRDLKGRNN 209
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+VI+VI +GA A +YEA+NNAG L+ A
Sbjct: 210 NVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPVPPVGALSSA 269
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L RL SN R+L + A K ++ GG MHE +D ++R + +GS + FE+LGLY
Sbjct: 270 LSRLQSNRPLRELREVA---KGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 326
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML----------------PL 182
YIGPVDGHN++DL +LK+V++ G VLIHV+TEK + P
Sbjct: 327 YIGPVDGHNIDDLISILKEVRSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 386
Query: 183 KLQQTRLFCKI-----------------------LDNRMGGGTGLNLFQKHFPIRCFDVG 219
+Q + K + MGGGTG+NLF + FP RCFDVG
Sbjct: 387 TGKQFKGSAKTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFLRRFPTRCFDVG 446
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 447 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 506
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD TFMACLPNMVVM
Sbjct: 507 GPTHCGAFDVTFMACLPNMVVM 528
>sp|O22567|DXS1_ORYSJ 1-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=CLA1 PE=2 SV=2
Length = 720
Score = 327 bits (837), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 231/382 (60%), Gaps = 94/382 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ +D+FG GHSST+ISA L GMAVGRDL G N
Sbjct: 157 MPTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAAL----------GMAVGRDLKGGKN 206
Query: 54 HVISVIVEGATIARMSYEAINNAG-------------------------------VLNKA 82
+V++VI +GA A +YEA+NNAG L+ A
Sbjct: 207 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSSA 266
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLY 138
L +L S+ R+L + A K ++ GG +HE +D ++R + +GS + FE+LGLY
Sbjct: 267 LSKLQSSRPLRELREVA---KGVTKQIGGSVHELAAKVDEYARGMISGSGSTLFEELGLY 323
Query: 139 YIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK-------EKAM------------ 179
YIGPVDGHN++DL +L++VK+ G VLIHV+TEK E+A
Sbjct: 324 YIGPVDGHNIDDLITILREVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 383
Query: 180 ------LPLK-LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVG 219
P K L T F + L DNR MGGGTGLN F + FP RCFDVG
Sbjct: 384 TGKQFKSPAKTLSYTNYFAEALIAEAEQDNRVVAIHAAMGGGTGLNYFLRRFPNRCFDVG 443
Query: 220 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGAD 279
IAEQHAVTFAAGLA EGLKPFCAIYSSFLQR +DQV HDVDLQKLPVRFA+DRAGLVGAD
Sbjct: 444 IAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 503
Query: 280 GPTHCGAFDTTFMACLPNMVVM 301
GPTHCGAFD T+MACLPNMVVM
Sbjct: 504 GPTHCGAFDVTYMACLPNMVVM 525
>sp|B3QFY7|DXS_RHOPT 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas
palustris (strain TIE-1) GN=dxs PE=3 SV=1
Length = 641
Score = 271 bits (692), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 161/370 (43%), Positives = 206/370 (55%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ HD FG GHSSTSISAGL GMAV +L GK N
Sbjct: 94 IRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSISAGL----------GMAVASELAGKKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + K + + + +SR G FE+LG YY+GPVDGHNL+
Sbjct: 204 YRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGG-GTLFEELGFYYVGPVDGHNLDH 262
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------------- 188
L +L+ V+ D G LIHV+T+K K P + +
Sbjct: 263 LLPILQNVRD-ADTGPFLIHVVTQKGKGYGPAEAAADKYHAVVKFDIATGAQAKAKSNAP 321
Query: 189 ----LFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F + L D+++ G GTG+++F+K FP R FDVGIAEQHAVTFAAG
Sbjct: 322 SYQNVFGQSLVKEAQKDDKIVGITAAMPSGTGIDIFEKAFPKRTFDVGIAEQHAVTFAAG 381
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAGLVGADG TH G+FD +
Sbjct: 382 LATEGYKPFCAIYSTFLQRAYDQIVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDNAY 441
Query: 292 MACLPNMVVM 301
+ CLPNMV+M
Sbjct: 442 LGCLPNMVIM 451
>sp|Q6NB76|DXS_RHOPA 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas
palustris (strain ATCC BAA-98 / CGA009) GN=dxs PE=3 SV=1
Length = 641
Score = 271 bits (692), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 161/370 (43%), Positives = 206/370 (55%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ HD FG GHSSTSISAGL GMAV +L GK N
Sbjct: 94 IRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSISAGL----------GMAVASELAGKKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + K + + + +SR G FE+LG YY+GPVDGHNL+
Sbjct: 204 YRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGG-GTLFEELGFYYVGPVDGHNLDH 262
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------------- 188
L +L+ V+ D G LIHV+T+K K P + +
Sbjct: 263 LLPILQNVRD-ADTGPFLIHVVTQKGKGYGPAEAAADKYHAVVKFDIATGAQAKAKSNAP 321
Query: 189 ----LFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F + L D+++ G GTG+++F+K FP R FDVGIAEQHAVTFAAG
Sbjct: 322 SYQNVFGQSLVKEAQKDDKIVGITAAMPSGTGIDIFEKAFPKRTFDVGIAEQHAVTFAAG 381
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAGLVGADG TH G+FD +
Sbjct: 382 LATEGYKPFCAIYSTFLQRAYDQIVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDNAY 441
Query: 292 MACLPNMVVM 301
+ CLPNMV+M
Sbjct: 442 LGCLPNMVIM 451
>sp|B6IRB5|DXS_RHOCS 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodospirillum centenum
(strain ATCC 51521 / SW) GN=dxs PE=3 SV=1
Length = 642
Score = 270 bits (690), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 162/371 (43%), Positives = 206/371 (55%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG GHSSTSISA L GMAVGRD LG N
Sbjct: 94 IRTLRMGGGLSGFTKRAESEYDPFGAGHSSTSISAAL----------GMAVGRDQLGHKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKA----------------------LKRLHSNPQ 91
HVI VI +G+ A M+YEA+NNAG +N L RL S+ Q
Sbjct: 144 HVICVIGDGSISAGMAYEAMNNAGAMNSRMIVILNDNDMSIAPPVGAMSGYLSRLISSRQ 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
+R L + K ++ + E + E G + FE++G YY+GP+DGHNL+
Sbjct: 204 YRGLRE---LGKQVAERLPRPLQEAARRAEEYARGFVTGGTLFEEMGFYYVGPIDGHNLD 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ----------------------- 186
L VL+ ++ G VLIH +T+K + P +
Sbjct: 261 HLLPVLENIRDDQGTGPVLIHAVTQKGRGYGPAERSADKLHAVSKFDVITGAQAKAKANA 320
Query: 187 ---TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
TR+F L D+R M GTGL+LF+K FP R +DVGIAEQHAVTFAA
Sbjct: 321 PSYTRVFADSLIQEAEADSRVVAITAAMPSGTGLDLFEKRFPDRTYDVGIAEQHAVTFAA 380
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLAAEGLKPFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVG+DG TH G+FD
Sbjct: 381 GLAAEGLKPFCAIYSTFLQRAYDQVVHDVCIQNLPVRFAIDRAGLVGSDGCTHAGSFDVA 440
Query: 291 FMACLPNMVVM 301
++ C+PN+V+M
Sbjct: 441 YLGCVPNIVIM 451
>sp|Q130G7|DXS_RHOPS 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas
palustris (strain BisB5) GN=dxs PE=3 SV=1
Length = 638
Score = 270 bits (690), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/370 (43%), Positives = 205/370 (55%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G NN
Sbjct: 91 IRTLRTAGGLSGFTKRTESDYDPFGAAHSSTSISAGL----------GMAVARDLAGGNN 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG +N L RL+S
Sbjct: 141 NVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAPPVGAMSAYLSRLYSGKT 200
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + K + + + +SR G FE+LG YY+GP+DGHNL+
Sbjct: 201 YRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGG-GTLFEELGFYYVGPIDGHNLDH 259
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------------- 188
L +L+ V+ + G LIHV+T+K K P + +
Sbjct: 260 LLPILQNVRD-AETGPFLIHVVTQKGKGYAPAEAASDKYHAVVKFDIATGTQAKAKSNAP 318
Query: 189 ----LFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F + L D+++ G GTG+++F+K FP R FDVGIAEQHAVTFAAG
Sbjct: 319 SYQNVFGQSLVKEAAKDDKIVGITAAMPSGTGIDIFEKAFPARTFDVGIAEQHAVTFAAG 378
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQV HDV LQ LPVRFAIDRAGLVGADG TH G+FD +
Sbjct: 379 LATEGYKPFCAIYSTFLQRAYDQVVHDVALQSLPVRFAIDRAGLVGADGATHAGSFDNAY 438
Query: 292 MACLPNMVVM 301
+ CLPNMV+M
Sbjct: 439 LGCLPNMVIM 448
>sp|A6WWC4|DXS_OCHA4 1-deoxy-D-xylulose-5-phosphate synthase OS=Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=dxs PE=3
SV=1
Length = 638
Score = 270 bits (689), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/374 (44%), Positives = 208/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQT GL E+ +D FG HSSTSISAGL GMAV DL G+
Sbjct: 93 IRTLRQTGGLSGFTKRTESEYDPFGAAHSSTSISAGL----------GMAVASDLSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGKT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAKKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L +LK V+ + G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPILKNVRDTQE-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQSKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D+R M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDRIVAITAAMPSGTGLDLFGEVFPQRTFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>sp|Q21A74|DXS_RHOPB 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas
palustris (strain BisB18) GN=dxs PE=3 SV=1
Length = 641
Score = 269 bits (688), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/370 (43%), Positives = 205/370 (55%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 94 IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGL----------GMAVARDLAGGKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + K + + + +SR G FE+LG YY+GPVDGHNL+
Sbjct: 204 YRTLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGG-GTLFEELGFYYVGPVDGHNLDH 262
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------------- 188
L +L+ V+ D G LIHV+T+K K P + +
Sbjct: 263 LLPILQNVRD-ADTGPFLIHVVTQKGKGYGPAEAASDKYHAVVKFDIATGAQAKAKSNAP 321
Query: 189 ----LFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F + L D+++ G GTG+++F+K FP R FDVGIAEQHAVTFAAG
Sbjct: 322 SYQNVFGQSLVKEAQKDDKIVGITAAMPSGTGIDIFEKAFPTRTFDVGIAEQHAVTFAAG 381
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAAEG KPFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD F
Sbjct: 382 LAAEGYKPFCAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAF 441
Query: 292 MACLPNMVVM 301
+ CLPNMV+M
Sbjct: 442 LGCLPNMVIM 451
>sp|Q3SUZ1|DXS_NITWN 1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter winogradskyi
(strain Nb-255 / ATCC 25391) GN=dxs PE=3 SV=1
Length = 666
Score = 268 bits (686), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 200/370 (54%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISA L GMAV RDL G NN
Sbjct: 118 IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISASL----------GMAVARDLSGGNN 167
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 168 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 227
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + A K + + ++ +SR S FE+LG YY+GP+DGHNL+
Sbjct: 228 YRSLREAAKQLGKHLPKMIADRAERVEEYSRGFMTNS-GTLFEELGFYYVGPIDGHNLDH 286
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRLFCKI----------------- 193
L VLK V+ + + G +L+HV+T+K K P + + +
Sbjct: 287 LLPVLKNVRDMEN-GPILVHVVTQKGKGYPPAEAAADKYHAVVKFDISTGAQSKSKPNAP 345
Query: 194 ----------------------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+ M GTG+++F FP R FDVGIAEQHAVTFAAG
Sbjct: 346 SYQNVFGASLVKEAEKDDKIVAITAAMPSGTGVDIFNNAFPERTFDVGIAEQHAVTFAAG 405
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD F
Sbjct: 406 LATEGFKPFCAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAF 465
Query: 292 MACLPNMVVM 301
+ CLPNMV+M
Sbjct: 466 LGCLPNMVIM 475
>sp|Q89RW1|DXS_BRAJA 1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium japonicum
(strain USDA 110) GN=dxs PE=3 SV=1
Length = 661
Score = 268 bits (686), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/372 (42%), Positives = 206/372 (55%), Gaps = 85/372 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 113 IRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSISAGL----------GMAVARDLSGGKN 162
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 163 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 222
Query: 92 FRQLCQEAFSSKDKKQKF-GGQMHEIDAFSRE--IEAGSRACFFEDLGLYYIGPVDGHNL 148
+R L + A + K + + ++ +SR ++ G+ FE+LG YY+GP+DGHNL
Sbjct: 223 YRTLREAAKQINKRLPKIIANRANRVEEYSRGFMMDGGT---LFEELGFYYVGPIDGHNL 279
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRLFCKI--------------- 193
+ L VLK V+ + + G +L+HV+T+K K P + + +
Sbjct: 280 DHLLPVLKNVRDMEE-GPILVHVVTQKGKGYGPAEASADKYHAVVKFDVATGTQAKAKPN 338
Query: 194 ------------------------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
+ M GTG+++F K FP R FDVGIAEQHAVTFA
Sbjct: 339 APAYQNVFGQSLVKEAQKDEKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFA 398
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLA+EG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 399 AGLASEGYKPFCAIYSTFLQRGYDQIVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDN 458
Query: 290 TFMACLPNMVVM 301
++ CLPNMV+M
Sbjct: 459 AYLGCLPNMVIM 470
>sp|A5EEQ0|DXS_BRASB 1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp.
(strain BTAi1 / ATCC BAA-1182) GN=dxs PE=3 SV=1
Length = 641
Score = 268 bits (685), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 162/376 (43%), Positives = 210/376 (55%), Gaps = 93/376 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 94 IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGL----------GMAVARDLSGGKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDA-FSREIEAGSRA------CFFEDLGLYYIGPVD 144
+R L +D ++ G + ++ A + +E SR FE+LG YY+GP+D
Sbjct: 204 YRTL-------RDAAKQLGQHLPKVIANRASRVEEYSRGFMMDGGTLFEELGFYYVGPID 256
Query: 145 GHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------- 188
GHNL+ L VLK V+ + + G +L+HV+T+K K P + +
Sbjct: 257 GHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYPPAEASADKYHAVVKFDVATGTQAK 315
Query: 189 ----------LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHA 225
+F + L D++ M GTG+++F K FP R FDVGIAEQHA
Sbjct: 316 AKPNAPAYQNVFGQSLVKEAEKDDKVVGITAAMPSGTGIDIFAKAFPKRTFDVGIAEQHA 375
Query: 226 VTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCG 285
VTFAAGLAAEG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G
Sbjct: 376 VTFAAGLAAEGFKPFCAIYSTFLQRGYDQIVHDVCIQSLPVRFAIDRAGLVGADGATHAG 435
Query: 286 AFDTTFMACLPNMVVM 301
+FD ++ CLPNMV+M
Sbjct: 436 SFDNAYLGCLPNMVIM 451
>sp|A4YQ36|DXS_BRASO 1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp.
(strain ORS278) GN=dxs PE=3 SV=1
Length = 641
Score = 267 bits (683), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 162/376 (43%), Positives = 210/376 (55%), Gaps = 93/376 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 94 IRTLRTGGGLSGFTKRAESDYDPFGAAHSSTSISAGL----------GMAVARDLSGGKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDA-FSREIEAGSRA------CFFEDLGLYYIGPVD 144
+R L +D ++ G + ++ A + +E SR FE+LG YY+GP+D
Sbjct: 204 YRTL-------RDAAKQLGQHLPKVIANRASRVEEYSRGFMMDGGTLFEELGFYYVGPID 256
Query: 145 GHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------- 188
GHNL+ L VLK V+ + + G +L+HV+T+K K P + +
Sbjct: 257 GHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYSPAEAAADKYHAVAKFDIATGTQAK 315
Query: 189 ----------LFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHA 225
+F + L D ++ G GTG+++F K FP R FDVGIAEQHA
Sbjct: 316 AKPNAPAYQNVFGQSLVKEAEKDEKIVGITAAMPSGTGIDIFAKAFPKRTFDVGIAEQHA 375
Query: 226 VTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCG 285
VTFAAGLAAEG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G
Sbjct: 376 VTFAAGLAAEGYKPFCAIYSTFLQRGYDQIVHDVCIQSLPVRFAIDRAGLVGADGATHAG 435
Query: 286 AFDTTFMACLPNMVVM 301
+FD ++ CLPNMV+M
Sbjct: 436 SFDNAYLGCLPNMVIM 451
>sp|Q07SR3|DXS_RHOP5 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas
palustris (strain BisA53) GN=dxs PE=3 SV=1
Length = 640
Score = 265 bits (677), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/370 (41%), Positives = 197/370 (53%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ HD FG GHSSTSISAGL GMAV DL G N
Sbjct: 94 IRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSISAGL----------GMAVASDLAGTKN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG +N L RL+S
Sbjct: 144 NVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAPPVGAMSAYLSRLYSGKT 203
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + K + + + +SR G FE+LG YY+GP+DGHNL+
Sbjct: 204 YRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGG-GTLFEELGFYYVGPIDGHNLDH 262
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRLFCKI----------------- 193
L +L+ V+ D G LIHV+T+K K P + + +
Sbjct: 263 LLPILQNVRD-ADAGPFLIHVVTQKGKGYAPAEAAADKYHAVVKFDIATGTQAKTKSNAP 321
Query: 194 ----------------------LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+ M GTG+++F+K FP R FDVGIAEQHAVTFAAG
Sbjct: 322 SYQNVFGASLVKEAQKDDKIVGITAAMPSGTGIDIFEKAFPKRTFDVGIAEQHAVTFAAG 381
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G+FD +
Sbjct: 382 LATEGFKPFCAIYSTFLQRGYDQIVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDNAY 441
Query: 292 MACLPNMVVM 301
+ CLPN V+M
Sbjct: 442 LGCLPNFVIM 451
>sp|B2IDK3|DXS_BEII9 1-deoxy-D-xylulose-5-phosphate synthase OS=Beijerinckia indica
subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)
GN=dxs PE=3 SV=1
Length = 642
Score = 264 bits (675), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 197/353 (55%), Gaps = 74/353 (20%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+V+D FG HSSTSISAGL GMA L G NN+VI+VI +G+ A M+Y
Sbjct: 111 ESVYDPFGTAHSSTSISAGL----------GMAAATTLSGGNNNVIAVIGDGSMSAGMAY 160
Query: 71 EAINNAGV----------------------LNKALKRLHSNPQFRQLCQEAFSSKDKKQK 108
EA+NNAG L+ L RL S +R + + A
Sbjct: 161 EAMNNAGAMHSRLIIILNDNEMSIAPPAGALSAYLARLVSGGTYRTVREAAKQLGRHLPH 220
Query: 109 F-GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAV 167
F + + + F+R AG FE+LG+YY+GP+DGHNL+ L VLK V+ + G +
Sbjct: 221 FIYDRARKTEEFARNFWAG--GTMFEELGIYYVGPIDGHNLDHLLPVLKNVRDFKETGPI 278
Query: 168 LIHVITEKEKAMLPLKLQQ--------------------------TRLFCKIL------D 195
L+HV+T+K K P TR+F L D
Sbjct: 279 LVHVVTQKGKGYAPAAAASDKYHSVNTFDVVTGVQTKPKANAPSYTRVFADALVKEAERD 338
Query: 196 NR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 248
++ M GGTGL++F K FP R FDVGIAEQHAVTFAAGLA EG +PFCA+YS+FL
Sbjct: 339 DKIVAITAAMPGGTGLDVFGKAFPERTFDVGIAEQHAVTFAAGLATEGYRPFCALYSTFL 398
Query: 249 QRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
QR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD +++ LPNMV+M
Sbjct: 399 QRGYDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVSYLGILPNMVIM 451
>sp|Q1QQ40|DXS_NITHX 1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter hamburgensis
(strain X14 / DSM 10229) GN=dxs PE=3 SV=1
Length = 668
Score = 264 bits (675), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 204/370 (55%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISA L GMAV RDL G N
Sbjct: 120 IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISASL----------GMAVARDLSGGKN 169
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG +N L RL+S
Sbjct: 170 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAPPVGAMSAYLSRLYSGKT 229
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + A K + + ++ +SR S FE+LG YY+GP+DGHNL+
Sbjct: 230 YRSLREAAKQLGKHLPKMIADRAERVEEYSRGFMVNS-GTLFEELGFYYVGPIDGHNLDH 288
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------------- 188
L VLK V+ + + G +L+HV+T+K K P + +
Sbjct: 289 LLPVLKNVRDMEN-GPILLHVVTQKGKGYGPAEAAADKYHAVVKFDVSTGAQSKSKPNAP 347
Query: 189 ----LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F + L D++ M GTG+++F K FP R FDVGIAEQHAVTFAAG
Sbjct: 348 AYQNVFGQSLVKEAEKDDKIIAITAAMPSGTGVDIFNKAFPKRTFDVGIAEQHAVTFAAG 407
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G+FD +
Sbjct: 408 LATEGFKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAY 467
Query: 292 MACLPNMVVM 301
+ CLPN V+M
Sbjct: 468 LGCLPNFVIM 477
>sp|Q8G292|DXS_BRUSU 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis biovar 1
(strain 1330) GN=dxs PE=3 SV=1
Length = 643
Score = 264 bits (675), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANVPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>sp|A9M8W0|DXS_BRUC2 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella canis (strain
ATCC 23365 / NCTC 10854) GN=dxs PE=3 SV=1
Length = 643
Score = 264 bits (675), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANVPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>sp|Q57ET1|DXS_BRUAB 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus biovar
1 (strain 9-941) GN=dxs PE=3 SV=1
Length = 643
Score = 264 bits (675), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>sp|B2S9T6|DXS_BRUA1 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain
S19) GN=dxs PE=3 SV=1
Length = 643
Score = 264 bits (675), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>sp|Q2YMF0|DXS_BRUA2 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain
2308) GN=dxs PE=3 SV=1
Length = 643
Score = 264 bits (675), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>sp|A5VP09|DXS_BRUO2 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella ovis (strain
ATCC 25840 / 63/290 / NCTC 10512) GN=dxs PE=3 SV=1
Length = 643
Score = 264 bits (674), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>sp|Q985Y3|DXS_RHILO 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium loti (strain
MAFF303099) GN=dxs PE=3 SV=1
Length = 637
Score = 264 bits (674), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 167/368 (45%), Positives = 205/368 (55%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA RDL G N
Sbjct: 94 IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAAARDLSGGRN 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
+VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ + G
Sbjct: 144 NVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGKA 203
Query: 113 MHEIDAFSREIEA--GSRA------------------CFFEDLGLYYIGPVDGHNLEDLA 152
+ F +++ + G RA FE+LG Y+IGP+DGHNLE L
Sbjct: 204 YAGLRDFGKKLTSYLGKRADRAITRAVEHARGYVTGGTLFEELGFYHIGPIDGHNLEHLI 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ-------------------------- 186
VLK V+ + G VLIHV+T+K K P +
Sbjct: 264 PVLKNVRDNGE-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAPANAPAY 322
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D+R M GTGL+LF + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 323 TKVFAESLIREAREDDRIVAVTAAMPSGTGLDLFGEVFPSRTFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
EG KPF AIYS+FLQR +DQV HDV +QKLPVRF IDRAG VGADG THCGAFDTTF+A
Sbjct: 383 TEGYKPFAAIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGFVGADGATHCGAFDTTFLA 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 SLPGFVVM 450
>sp|Q8YFM2|DXS_BRUME 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=dxs
PE=3 SV=1
Length = 643
Score = 264 bits (674), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>sp|C0RHE3|DXS_BRUMB 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis
biotype 2 (strain ATCC 23457) GN=dxs PE=3 SV=1
Length = 643
Score = 264 bits (674), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>sp|B0CKC0|DXS_BRUSI 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis (strain
ATCC 23445 / NCTC 10510) GN=dxs PE=3 SV=1
Length = 643
Score = 264 bits (674), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 206/374 (55%), Gaps = 90/374 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV +L G+
Sbjct: 93 IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGL----------GMAVASELSGEKR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG L+ L RL S
Sbjct: 143 NVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLVSGRT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACF-----FEDLGLYYIGPVDGH 146
+R + + A K KF + +R+ E +RA F FE+LG YY+GP+DGH
Sbjct: 203 YRSVREAAKQVAQKLPKF------LQDKARKSEEYARAFFTGGTLFEELGFYYVGPIDGH 256
Query: 147 NLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL---------------------- 184
NL+ L VLK V+ G VLIHV+T+K K P +
Sbjct: 257 NLDHLLPVLKNVRDT-QKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPP 315
Query: 185 ----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVT 227
T++F L D++ M GTGL+LF + FP R FDVGIAEQHAVT
Sbjct: 316 ANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVT 375
Query: 228 FAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAF 287
FAAGLA+EG KPFCAIYS+FLQR +DQV HDV +Q LPVRF IDRAGLVGADGPTH G+F
Sbjct: 376 FAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSF 435
Query: 288 DTTFMACLPNMVVM 301
DT F+A LP VVM
Sbjct: 436 DTGFLAALPGFVVM 449
>sp|Q2IRL7|DXS_RHOP2 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas
palustris (strain HaA2) GN=dxs PE=3 SV=1
Length = 638
Score = 263 bits (671), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 202/370 (54%), Gaps = 81/370 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+R GL E+ +D FG HSSTSISAGL GMAV RDL G N
Sbjct: 91 IRTLRTAGGLSGFTKRTESDYDPFGAAHSSTSISAGL----------GMAVARDLAGGTN 140
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +G+ A M+YEA+NNAG +N L RL+S
Sbjct: 141 NVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAPPVGAMSAYLSRLYSGKT 200
Query: 92 FRQLCQEAFS-SKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + K + + + +SR G FE+LG YY+GP+DGHNL+
Sbjct: 201 YRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGG-GTLFEELGFYYVGPIDGHNLDH 259
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR---------------------- 188
L +L+ V+ + G LIHV+T+K K P + +
Sbjct: 260 LLPILQNVRD-AETGPFLIHVVTQKGKGYAPAEAASDKYHAVVKFDIATGTQAKAKSNAP 318
Query: 189 ----LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+F + L D++ M GTG+++F+K FP R FDVGIAEQHAVTFAAG
Sbjct: 319 SYQNVFGQSLVKEAAKDDKVVGITAAMPSGTGIDIFEKAFPDRTFDVGIAEQHAVTFAAG 378
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LA EG KPFCAIYS+FLQR +DQ+ HDV +Q LPVRFAIDRAGLVGADG TH G+FD +
Sbjct: 379 LATEGFKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAY 438
Query: 292 MACLPNMVVM 301
+ CLPN V+M
Sbjct: 439 LGCLPNFVIM 448
>sp|A7IPK6|DXS_XANP2 1-deoxy-D-xylulose-5-phosphate synthase OS=Xanthobacter
autotrophicus (strain ATCC BAA-1158 / Py2) GN=dxs PE=3
SV=1
Length = 643
Score = 261 bits (667), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 162/370 (43%), Positives = 200/370 (54%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL G+
Sbjct: 93 IRTLRQGGGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVARDLSGEER 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+V+ VI +GA A M+YEA+NNAG ++ L RL S
Sbjct: 143 NVVCVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNDMSIAPPTGAMSAYLARLISGQT 202
Query: 92 FRQLCQEAFSSKDKKQKFGGQ-MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
+R L + KF + + F+R G FE+LG YY+GP+DGHNL+
Sbjct: 203 YRSLREIGKQIAGHLPKFVERGAARAEEFARGFWTGG--TLFEELGFYYVGPIDGHNLDH 260
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VLK V+ G +L+HV+T+K K P +
Sbjct: 261 LLPVLKNVRDA-KTGPILVHVVTQKGKGYAPAEASADKYHGVVKFDVVTGAQVKAKSNAP 319
Query: 187 --TRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
TR+F + L ++ M GTGL+LF + +P R FDVGIAEQHAVTFAAG
Sbjct: 320 SYTRVFAESLISQARHDPKVVAITAAMPSGTGLDLFGQVYPERTFDVGIAEQHAVTFAAG 379
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAAEG KPFCA+YS+FLQR +DQV HDV LQ LPVRF IDRAGLVGADG TH GAFD F
Sbjct: 380 LAAEGFKPFCALYSTFLQRAYDQVVHDVALQGLPVRFIIDRAGLVGADGATHAGAFDIAF 439
Query: 292 MACLPNMVVM 301
+ACLP M VM
Sbjct: 440 LACLPGMTVM 449
>sp|Q6G4D1|DXS_BARHE 1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella henselae
(strain ATCC 49882 / Houston 1) GN=dxs PE=3 SV=1
Length = 640
Score = 261 bits (666), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 201/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG-KN 52
+RT+RQ GL E+V+D FG GHSSTSISAGL GMAV L K
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMAVASALKAEKR 142
Query: 53 NHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++++VI +GA A M+YEA+NNAG LN L RL S P
Sbjct: 143 RNIVAVIGDGAMSAGMAYEAMNNAGALNARLIVVLNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQEAFSSKDKKQKFG-GQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + +K KF + + F+R G FE+LG YY+GP+DGHNL+
Sbjct: 203 AYRSLRERVKVLGEKLPKFFLDKARRSEEFARGFLVG--GTLFEELGFYYVGPIDGHNLK 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P G VLIHV+T K K P +
Sbjct: 261 HLLPVLKNVREYPT-GPVLIHVVTHKGKGYAPAEASLDKYHGVNRFDIITGKQVKASSNV 319
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L D++ M GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 320 LPYTKVFSKALREEASYDDKIVAITAAMPTGTGLDFFAEKFPERMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GMACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+ LP VVM
Sbjct: 440 FLTTLPEFVVM 450
>sp|Q6G0D4|DXS_BARQU 1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella quintana
(strain Toulouse) GN=dxs PE=3 SV=1
Length = 640
Score = 261 bits (666), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 203/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG-KN 52
+RT+RQ GL E+V+D FG GHSSTSISAGL GM V L K
Sbjct: 93 IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGL----------GMTVASALKAEKR 142
Query: 53 NHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
++I+VI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQE-AFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + SK + F + + F+R G F++LG YY+GP+DGHNL+
Sbjct: 203 AYRSLRERIKMFSKKMPKFFLDKARRSEEFARGFLVG--GTLFDELGFYYVGPIDGHNLK 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P+ G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVREYPN-GPVLVHVVTHKGKGYAPAEASSDKYHGVNSFDVVTGKQIKTQSNA 319
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L DN++ G GTGL+ F + FP R FDVGIAEQHAVTFAA
Sbjct: 320 LAYTKVFSKALIEEATHDNKIVGITAAMPTGTGLDAFAEKFPERMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQV HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GMACEGYKPFVAIYSTFLQRAYDQVIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+A LP VVM
Sbjct: 440 FLATLPEFVVM 450
>sp|Q2W367|DXS_MAGSA 1-deoxy-D-xylulose-5-phosphate synthase OS=Magnetospirillum
magneticum (strain AMB-1 / ATCC 700264) GN=dxs PE=3 SV=1
Length = 644
Score = 260 bits (665), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 198/356 (55%), Gaps = 79/356 (22%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ +D FG GHSSTSISA L GMAV RDL G N+VI+VI +GA A +Y
Sbjct: 116 ESEYDPFGAGHSSTSISAAL----------GMAVARDLKGATNNVIAVIGDGAMSAGQAY 165
Query: 71 EAINNAGV----------------------LNKALKRLHSNPQF---RQLCQE-AFSSKD 104
EA+NNAG L+ L RL S+P + R L ++ A
Sbjct: 166 EAMNNAGAAGSRLIVILNDNDMSIAPPVGALSAHLSRLLSSPSYHSLRHLVKDLAHLLPP 225
Query: 105 KKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDP 164
++ G+ E ++R + +G FE+LG YY+GP+DGHN E L VLK ++ D
Sbjct: 226 SLERAVGRAEE---YARGMVSGG-GTLFEELGFYYVGPIDGHNFEHLLPVLKNLRDSDDT 281
Query: 165 GAVLIHVITEKEKAMLPLKL--------------------------QQTRLFCKIL---- 194
V++HV+T+K + P + T +F K L
Sbjct: 282 KPVMLHVVTKKGRGYPPAEAAADKYHGVGRFDVLTGQLEKPKANAPSYTSVFAKALIAEA 341
Query: 195 --DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS 245
D+R M GGTGL+ F FP R FDVGIAEQHAVTFA GLA EG KPFCAIYS
Sbjct: 342 EVDDRVVAITAAMPGGTGLDKFGDRFPARTFDVGIAEQHAVTFAGGLATEGFKPFCAIYS 401
Query: 246 SFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
SFLQR +DQV HDV LQKLPVRFAIDRAGLVGADG TH G++D F+ CLP++V+M
Sbjct: 402 SFLQRAYDQVQHDVVLQKLPVRFAIDRAGLVGADGATHAGSYDMAFLGCLPDIVIM 457
>sp|Q11KE0|DXS_MESSB 1-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhizobium sp.
(strain BNC1) GN=dxs PE=3 SV=1
Length = 650
Score = 260 bits (665), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 163/375 (43%), Positives = 204/375 (54%), Gaps = 92/375 (24%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV R+L G
Sbjct: 107 IRTLRQEDGLSGFTKRSESEYDPFGAAHSSTSISAGL----------GMAVARELSGGQR 156
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
HVI+VI +GA A M+YEA+NNAG L+ L RL S
Sbjct: 157 HVIAVIGDGALSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSTYLARLASGRA 216
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEI--DAFSREIEAG----SRACFFEDLGLYYIGPVDG 145
+R + +D +K + + A +R +E + FE++G ++IGP+DG
Sbjct: 217 YRGI-------RDVGKKLTSHLGKSFDRAITRAVEHARGFVTGGTLFEEMGFFHIGPIDG 269
Query: 146 HNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------- 184
H+LE L VL+ V+ G VLIHV+T+K K P +
Sbjct: 270 HDLEALVPVLRNVRD-NGTGPVLIHVVTQKGKGYPPAEAAADKYHGVAKFDVITGAQAKS 328
Query: 185 -----QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAV 226
T++F + L D R M GTGL+LF+K FP R FDVGIAEQHAV
Sbjct: 329 PAGAPSYTKVFAQALVQEAREDKRIVAITAAMPSGTGLDLFEKEFPDRSFDVGIAEQHAV 388
Query: 227 TFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGA 286
TFAAGLA EG +PF AIYS+FLQR +DQV HDV +Q LPVRFAIDRAG VGADG THCGA
Sbjct: 389 TFAAGLATEGYRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGFVGADGATHCGA 448
Query: 287 FDTTFMACLPNMVVM 301
FD ++A LPNMVVM
Sbjct: 449 FDVAYLATLPNMVVM 463
>sp|A9IQP2|DXS_BART1 1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella tribocorum
(strain CIP 105476 / IBS 506) GN=dxs PE=3 SV=1
Length = 635
Score = 259 bits (663), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/371 (44%), Positives = 202/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLG-KN 52
+RT+RQ GL E+V+D FG GHSSTSISAGL GMAV L K
Sbjct: 93 IRTLRQEGGLSGFTKRVESVYDPFGAGHSSTSISAGL----------GMAVASALKEEKK 142
Query: 53 NHVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
VI+VI +GA A M+YEA+NNAG LN L RL S P
Sbjct: 143 RKVIAVIGDGAMSAGMAYEAMNNAGALNARLIVILNDNDMSIAPPTGSMSAHLARLVSRP 202
Query: 91 QFRQLCQEAFSSKDKKQKF-GGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + +K KF + + F+R + G F++LG YY+GP+DGHNL
Sbjct: 203 SYRHLRERVKMLSEKLPKFFWDKARRSEEFARGLLVG--GTLFDELGFYYVGPIDGHNLG 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L VLK V+ P G VL+HV+T K K P +
Sbjct: 261 HLLPVLKNVREYPH-GPVLVHVVTHKGKGYPPAEASSDKYHGVNRFDVTTGKQVKASSNI 319
Query: 184 LQQTRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L T++F K L D+++ G GTGL+ F + FP + FDVGIAEQHAVTFAA
Sbjct: 320 LPYTKVFSKALVEEACHDDKIVGITAAMPTGTGLDSFAEKFPEKMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GLACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+A LP VVM
Sbjct: 440 FLATLPEFVVM 450
>sp|A1URW6|DXS_BARBK 1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=dxs PE=3 SV=1
Length = 638
Score = 259 bits (662), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 165/371 (44%), Positives = 203/371 (54%), Gaps = 83/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+++D FG GHSSTSISAGL GMA+ L +
Sbjct: 93 IRTLRQEGGLSGFTKRSESIYDPFGAGHSSTSISAGL----------GMAMASALKAEER 142
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNP 90
+VI+VI +GA A M+YEA+NNAG L+ L RL S P
Sbjct: 143 RNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPTGAMSAHLARLVSRP 202
Query: 91 QFRQLCQE-AFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLE 149
+R L + SK + F Q + F+R G F++LG YY+GP+DGHN E
Sbjct: 203 SYRHLRERIKLFSKKFPKFFSEQASRSEEFARGFLVG--GTLFDELGFYYVGPIDGHNFE 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLP---------------------LKLQQTR 188
L VLK V+A P+ G VL+HV+T K K P +K Q TR
Sbjct: 261 HLLPVLKNVRAYPN-GPVLVHVVTHKGKGYAPAEESADKYHGVNRFDVVTGKQVKAQSTR 319
Query: 189 L-----FCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
L F K L D++ M GTGL+ F + F R FDVGIAEQHAVTFAA
Sbjct: 320 LSYTKVFSKALIEEATHDHKIVAITAAMPTGTGLDSFAEKFSDRMFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+A EG KPF AIYS+FLQR +DQ+ HDV +QKLPVRFAIDRAG VGADG TH G+FD
Sbjct: 380 GIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIV 439
Query: 291 FMACLPNMVVM 301
F+A LP VVM
Sbjct: 440 FLATLPEFVVM 450
>sp|A8IBS1|DXS_AZOC5 1-deoxy-D-xylulose-5-phosphate synthase OS=Azorhizobium caulinodans
(strain ATCC 43989 / DSM 5975 / ORS 571) GN=dxs PE=3
SV=1
Length = 641
Score = 258 bits (659), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 202/372 (54%), Gaps = 86/372 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV RDL G +
Sbjct: 93 IRTLRQGGGLSGFTRRSESEYDPFGAAHSSTSISAGL----------GMAVARDLSGGDR 142
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKAL----------------------KRLHSNPQ 91
+VI+VI +GA A M+YEA+NNAG ++ L RL S
Sbjct: 143 NVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNDMSIAPPTGAMSAYLARLISGRT 202
Query: 92 F---RQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNL 148
+ R++ ++ K K G E F+R G FE++G YY+GP+DGHNL
Sbjct: 203 YLSLREIGKQLAGHLPKFVKDGAAKAE--EFARGFWTG--GTLFEEMGFYYVGPIDGHNL 258
Query: 149 EDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ---------------------- 186
E L VLK V+ G +L+HV+T+K K P +
Sbjct: 259 EHLLPVLKNVRDA-KTGPILVHVVTQKGKGYPPAEASADKYHGVVKFDVVTGAQVKAKSN 317
Query: 187 ----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFA 229
TR+F + L D++ M GTGL+LF + FP R FDVGIAEQHAVTFA
Sbjct: 318 APSYTRVFAETLIDEARRDDKVVAITAAMPSGTGLDLFGQAFPQRTFDVGIAEQHAVTFA 377
Query: 230 AGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 289
AGLAAEG +PFCA+YS+FLQR +DQV HDV LQ LPVRFAIDRAGLVGADG TH GAFD
Sbjct: 378 AGLAAEGYRPFCALYSTFLQRGYDQVVHDVALQGLPVRFAIDRAGLVGADGATHAGAFDL 437
Query: 290 TFMACLPNMVVM 301
+ CLP VM
Sbjct: 438 AMLTCLPGFTVM 449
>sp|Q2RYD6|DXS1_RHORT 1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255) GN=dxs1 PE=3 SV=1
Length = 645
Score = 255 bits (652), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 162/373 (43%), Positives = 205/373 (54%), Gaps = 86/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMA+G L G
Sbjct: 94 IRTLRQGGGLSGFTLREESPYDPFGAGHSSTSISAGL----------GMAIGSALAGDAR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
V++VI +G+ A M+YEA+NNAG ++ L RL S+
Sbjct: 144 DVVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDNDMSIAPPVGAMSAYLSRLLSSKS 203
Query: 92 F---RQLCQEAFSS-KDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
+ R L +E + D ++ + E ++R + G FE+LG YY+GP+DGH
Sbjct: 204 WLSIRTLAKEIVARLPDALERTAKRAEE---YARGMVTGG-GTLFEELGFYYVGPIDGHR 259
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-----------------LQQ---- 186
++ L VL+ V+ G VLIHV+T+K K P + +Q+
Sbjct: 260 MDHLVPVLRNVREAGRDGPVLIHVVTQKGKGYAPAENAPDKYHGVSRFNVVTGVQEKAKP 319
Query: 187 -----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T +F K L D+R M GGTGL+ +P RCFDVGIAEQHAVTF
Sbjct: 320 QAPSYTAVFGKQLVAAAAKDHRIVGVTAAMPGGTGLDKLATAYPQRCFDVGIAEQHAVTF 379
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLA EGLKPF A+YSSFLQR +DQV HDV LQKLPVRFAIDRAG VGADG TH G FD
Sbjct: 380 AAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADGATHGGVFD 439
Query: 289 TTFMACLPNMVVM 301
F+ CLPN+VVM
Sbjct: 440 MAFLGCLPNLVVM 452
>sp|Q2RR29|DXS2_RHORT 1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255) GN=dxs2 PE=3 SV=1
Length = 645
Score = 254 bits (648), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 161/373 (43%), Positives = 205/373 (54%), Gaps = 86/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG GHSSTSISAGL GMA+G L G
Sbjct: 94 IRTLRQGGGLSGFTLREESPYDPFGAGHSSTSISAGL----------GMAIGSALAGDAR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGV----------------------LNKALKRLHSNPQ 91
V++VI +G+ A M+YEA+NNAG ++ L RL S+
Sbjct: 144 DVVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDNDMSIAPPVGAMSAYLSRLLSSKS 203
Query: 92 F---RQLCQEAFSS-KDKKQKFGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
+ R L +E + D ++ + E ++R + G FE++G YY+GP+DGH
Sbjct: 204 WLSIRTLAKEIVARLPDALERTAKRAEE---YARGMVTGG-GTLFEEMGFYYVGPIDGHR 259
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-----------------LQQ---- 186
++ L VL+ V+ G VLIHV+T+K K P + +Q+
Sbjct: 260 MDHLVPVLRNVREAGRDGPVLIHVVTQKGKGYAPAENAPDKYHGVSRFNVVTGVQEKAKP 319
Query: 187 -----TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
T +F K L D+R M GGTGL+ +P RCFDVGIAEQHAVTF
Sbjct: 320 QAPSYTAVFGKQLVAAAAKDHRIVAVTAAMPGGTGLDKLAAAYPQRCFDVGIAEQHAVTF 379
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLA EGLKPF A+YSSFLQR +DQV HDV LQKLPVRFAIDRAG VGADG TH G FD
Sbjct: 380 AAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADGATHGGVFD 439
Query: 289 TTFMACLPNMVVM 301
F+ CLPN+VVM
Sbjct: 440 MAFLGCLPNLVVM 452
>sp|A5V6A9|DXS_SPHWW 1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingomonas wittichii
(strain RW1 / DSM 6014 / JCM 10273) GN=dxs PE=3 SV=1
Length = 639
Score = 252 bits (644), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 162/371 (43%), Positives = 198/371 (53%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G AV L K
Sbjct: 94 IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAAL----------GFAVANKLANKEG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L ++ S+
Sbjct: 144 RAIAVIGDGAMSAGMAYEAMNNAKQAGNRLIVILNDNDMSIAPPVGALSAYLAKIVSSRP 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
F L F+ K QK +H+ S E G + FE+LG YY+GPVDGHNL+
Sbjct: 204 F--LSMRGFA-KRVAQKLPRPIHDFAKRSEEYARGMATGGTLFEELGFYYVGPVDGHNLD 260
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------------------- 184
L +L+ V+ D G +LIHV+T K K P +
Sbjct: 261 HLLPILENVRD-GDHGPILIHVVTNKGKGYAPAEAAADKYHGVQKFDVVSGVQAKAPPGP 319
Query: 185 -QQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T +F L D+R M GTGL+ F K FP R FDVGIAEQHAVTFAA
Sbjct: 320 PSYTGVFADALVAEAKRDDRICAITAAMPSGTGLDKFGKAFPERSFDVGIAEQHAVTFAA 379
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLAA+G +PFCAIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD T
Sbjct: 380 GLAAQGYRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDIT 439
Query: 291 FMACLPNMVVM 301
++A LPNMVVM
Sbjct: 440 YLATLPNMVVM 450
>sp|Q5FUB1|DXS_GLUOX 1-deoxy-D-xylulose-5-phosphate synthase OS=Gluconobacter oxydans
(strain 621H) GN=dxs PE=3 SV=2
Length = 660
Score = 252 bits (643), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 158/384 (41%), Positives = 205/384 (53%), Gaps = 100/384 (26%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMAV L + +
Sbjct: 101 IRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAHHLRAEED 150
Query: 54 ------HVISVIVEGATIARMSYEAINNA-------------------------GVLNKA 82
+VI+VI +G+ A M+YEA+NNA G ++
Sbjct: 151 PSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLNDNEMSIAPPVGSMSDY 210
Query: 83 LKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMH-EIDAFSREIEAGSRA-----CFFEDLG 136
L RL S+ QF FS +D K ++ +I+ ++ E +R FE+LG
Sbjct: 211 LSRLMSSRQF-------FSLRDLAGKVAKRLPGKIERTAKRAEEYARGMITGGTLFEELG 263
Query: 137 LYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL------------ 184
YY+GPV+GH++ L +L+ ++ D G +L+H+ITEK + P +
Sbjct: 264 FYYVGPVNGHDMSQLVPILRNLRDADDQGPILLHIITEKGRGYKPAEAAGDKYHAVSKFN 323
Query: 185 --------------QQTRLFCKILDNR-------------MGGGTGLNLFQKHFPIRCFD 217
T +F + L R M GTGLN F K +P R FD
Sbjct: 324 VVTGEQKKAPAGPPSYTSIFSRELMRRAKTDDKLITITAAMPSGTGLNAFAKAYPDRFFD 383
Query: 218 VGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVG 277
VGIAEQHAVTFAAG+A+EGL+PFCAIYS+FLQR +DQV HDV LQ LPVRFAIDRAGLVG
Sbjct: 384 VGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGLVG 443
Query: 278 ADGPTHCGAFDTTFMACLPNMVVM 301
ADG TH GAFD ++ CLPNMVVM
Sbjct: 444 ADGATHAGAFDLNYLCCLPNMVVM 467
>sp|Q0ARE5|DXS_MARMM 1-deoxy-D-xylulose-5-phosphate synthase OS=Maricaulis maris (strain
MCS10) GN=dxs PE=3 SV=1
Length = 643
Score = 251 bits (641), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 157/366 (42%), Positives = 206/366 (56%), Gaps = 76/366 (20%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG H+STSISA L G AVGRDL +N
Sbjct: 94 IRTLRQPGGLSGFTKRSESEYDPFGAAHASTSISAAL----------GFAVGRDLKDENR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQF--------------RQLCQEA 99
+VI+VI +G+ A M+YEA+NNAG + L + ++ R + +
Sbjct: 144 NVIAVIGDGSMSAGMAYEAMNNAGHIGGRLIVILNDNDMSIAPPVGAMSHYFARLVSSQR 203
Query: 100 FSSKDKKQKFGGQMHEIDAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAYV 154
+ S K K + ++ +R E R FE++G Y+GP+DGH+L+ L V
Sbjct: 204 YRSIRKLGKGVAKALRVEEAARRAEEYMRGMAMGGTLFEEMGFRYVGPIDGHDLDQLVPV 263
Query: 155 LKQVKAIPDPGAVLIHVITEKEKAMLPLKL-----------------QQ---------TR 188
L+ V+ D G VLIHV+T+K K P + QQ T+
Sbjct: 264 LRNVRD-GDNGPVLIHVVTQKGKGYAPAEASDDKYHGVAKFNVITGEQQKSKAAAPSYTK 322
Query: 189 LFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAE 235
+F + L D+R M GGTGL+LF + FP R FDVGIAEQHAVTFAAGLAA+
Sbjct: 323 VFAQQLIREAEADSRVVGVTAAMPGGTGLDLFGERFPDRMFDVGIAEQHAVTFAAGLAAD 382
Query: 236 GLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACL 295
G+KPF AIYS+FLQR +DQV HDV +QKLPVRFAIDRAGLVGADG TH G+FD ++ L
Sbjct: 383 GMKPFAAIYSTFLQRGYDQVVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDIGYLGAL 442
Query: 296 PNMVVM 301
P MV+M
Sbjct: 443 PGMVLM 448
>sp|B4RGW0|DXS_PHEZH 1-deoxy-D-xylulose-5-phosphate synthase OS=Phenylobacterium
zucineum (strain HLK1) GN=dxs PE=3 SV=1
Length = 638
Score = 248 bits (634), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 199/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG H++TSISA L G RD G++N
Sbjct: 92 IRTLRQGGGLSGFTKRAESDYDPFGAAHAATSISAAL----------GFCAARDREGRDN 141
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNKALKR-LHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
V++VI +G+ A M+YEA+NNA K L L+ N S+ + GG
Sbjct: 142 KVVAVIGDGSMSAGMAYEAMNNAYETTKQLTVILNDNDMSIAPPVGGMSAYMARLVSGGG 201
Query: 113 MHEID--------AFSREIEAGSR------------ACFFEDLGLYYIGPVDGHNLEDLA 152
+ AF R ++ +R FFE+LG YY+GP+DGH+++ L
Sbjct: 202 YQSLRNLGKAVSRAFPRPLQEAARKAEEYARGMVTGGTFFEELGFYYVGPIDGHDMDALV 261
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLK--------------------------LQQ 186
+VL+ + I D VL+HV+T+K K P +
Sbjct: 262 HVLQNARKIDDK-PVLVHVVTQKGKGYAPAEKAADKYHGVVKFDVVTGAQAKSQAAAPSY 320
Query: 187 TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T++F + L D R M GTGL+LF + FP R FDVGIAEQHAVTFAAGLA
Sbjct: 321 TKVFAQELVKHAERDERVVAITAAMPSGTGLDLFGQRFPERTFDVGIAEQHAVTFAAGLA 380
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
A+G+KPF AIYS+FLQR +DQV HDV +Q LPVRFAIDRAGLVGADGPTH G+FD FM
Sbjct: 381 ADGMKPFAAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGPTHAGSFDVGFMG 440
Query: 294 CLPNMVVM 301
LP MVVM
Sbjct: 441 QLPGMVVM 448
>sp|Q5NM38|DXS2_ZYMMO 1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Zymomonas mobilis
subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) GN=dxs2
PE=3 SV=2
Length = 650
Score = 246 bits (627), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 199/370 (53%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +DAFG HSSTSISA L G A+ L ++
Sbjct: 94 IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAAL----------GFAMASKLSDSDD 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
+++I +G+ A M+YEA+NNA G L+ L RL S+
Sbjct: 144 KAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDNEMSISPPVGALSSYLSRLISSRP 203
Query: 92 FRQLCQEAFSSKDKKQK-FGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
F L ++ K + D ++R + G FFE+LG YY+GPVDGHNL+
Sbjct: 204 FMNLRDIMRGVVNRMPKGLATAARKADEYARGMATG--GTFFEELGFYYVGPVDGHNLDQ 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VL+ V+ D G +L+HV+T K + P + +
Sbjct: 262 LIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPP 320
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D++ M GTGL+ FQ++FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA G KPFC +YS+FLQR +DQ+ HDV +Q LPVRFA+DRAGLVGADG TH G+FD F
Sbjct: 381 LAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAF 440
Query: 292 MACLPNMVVM 301
M LPNMVVM
Sbjct: 441 MVNLPNMVVM 450
>sp|Q5NN52|DXS1_ZYMMO 1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Zymomonas mobilis
subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) GN=dxs1
PE=3 SV=1
Length = 649
Score = 245 bits (626), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 199/370 (53%), Gaps = 82/370 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +DAFG HSSTSISA L G A+ L ++
Sbjct: 94 IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAAL----------GFAMASKLSDSDD 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
+++I +G+ A M+YEA+NNA G L+ L RL S+
Sbjct: 144 KAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDNEMSISPPVGALSSYLSRLISSRP 203
Query: 92 FRQLCQEAFSSKDKKQK-FGGQMHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLED 150
F L ++ K + D ++R + G FFE+LG YY+GPVDGHNL+
Sbjct: 204 FMNLRDIMRGVVNRMPKGLATAARKADEYARGMATG--GTFFEELGFYYVGPVDGHNLDQ 261
Query: 151 LAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQ------------------------ 186
L VL+ V+ D G +L+HV+T K + P + +
Sbjct: 262 LIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPP 320
Query: 187 --TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
T +F + L D++ M GTGL+ FQ++FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAG 380
Query: 232 LAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTF 291
LAA G KPFC +YS+FLQR +DQ+ HDV +Q LPVRFA+DRAGLVGADG TH G+FD F
Sbjct: 381 LAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAF 440
Query: 292 MACLPNMVVM 301
M LPNMVVM
Sbjct: 441 MVNLPNMVVM 450
>sp|Q2GC13|DXS_NOVAD 1-deoxy-D-xylulose-5-phosphate synthase OS=Novosphingobium
aromaticivorans (strain DSM 12444) GN=dxs PE=3 SV=1
Length = 640
Score = 244 bits (624), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 157/373 (42%), Positives = 197/373 (52%), Gaps = 88/373 (23%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISA L G A+ L G+
Sbjct: 94 IRTLRQAGGLSGFTKRSESEYDPFGTAHSSTSISAAL----------GFAIANKLSGRLG 143
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
I+VI +GA A M+YEA+NNA G L+ L RL S+
Sbjct: 144 KGIAVIGDGAMSAGMAYEAMNNAEAAGNRLIVILNDNDMSIAPPVGGLSAYLARLVSSGP 203
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFEDLGLYYIGPVDGHN 147
F L A + +K +HE D F+R + G FE+LG YY+GP+DGHN
Sbjct: 204 FLGLRDIA---RRLSRKLPRPLHEAARKTDEFARGMAMGG--TLFEELGFYYVGPIDGHN 258
Query: 148 LEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTR------------------- 188
++ L VL+ V+ + G LIHV+T+K K P + +
Sbjct: 259 IDQLIPVLENVRDAAE-GPCLIHVVTQKGKGYAPAEAAADKYHGVQKFDVITGEQVKAKA 317
Query: 189 -----------LFCKILDN---------RMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTF 228
K+ D M GTG++ F K P R FDVGIAEQHAVTF
Sbjct: 318 AAPAYQNVFGETLAKLADADPTICAITAAMPSGTGVDKFAKAHPDRTFDVGIAEQHAVTF 377
Query: 229 AAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFD 288
AAGLAAEG++PFCAIYS+FLQR FDQV HDV +Q LPVRFAIDRAGLVGADG TH G+FD
Sbjct: 378 AAGLAAEGMRPFCAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFD 437
Query: 289 TTFMACLPNMVVM 301
T++A LPN+VVM
Sbjct: 438 VTYLATLPNLVVM 450
>sp|B9JAL7|DXS_AGRRK 1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium
radiobacter (strain K84 / ATCC BAA-868) GN=dxs PE=3 SV=1
Length = 638
Score = 244 bits (623), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ G+ E+ +D FG HSSTSISAGL GMAV DL +
Sbjct: 94 IRTLRQEGGISGFTRRAESEYDPFGAAHSSTSISAGL----------GMAVAADLDKTDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSS---------- 102
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+
Sbjct: 144 RVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 103 ----KDKKQKFGGQM-HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+D +K + +D A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDLGKKLTAYLGKNVDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRDNAQ-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKVKPNAPSY 322
Query: 187 TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F L D+++ G GTGL+ Q+ FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFADALVQEATFDDKIVGITAAMPSGTGLDKLQEVFPKRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDTTF+A
Sbjct: 383 AEGFKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTFLA 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
>sp|Q9A6M5|DXS_CAUCR 1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter crescentus
(strain ATCC 19089 / CB15) GN=dxs PE=3 SV=1
Length = 640
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/371 (41%), Positives = 200/371 (53%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG H++TSISA L G RD G++N
Sbjct: 92 IRTLRQGGGLSGFTKRAESEYDPFGAAHAATSISAAL----------GFCAARDAKGEDN 141
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
VI+VI +G+ A M+YEA+N A G ++ L L S
Sbjct: 142 SVIAVIGDGSLGAGMAYEAMNAATDTTKRLIVILNDNDMSIAPPVGGMSAYLANLVSGGA 201
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
+R + + K +K M E + E G + FFE+LG YYIGP+DGH+++
Sbjct: 202 YRSVRK---LGKTVVEKLPTPMREAARKAEEYARGMVTGGTFFEELGFYYIGPIDGHDMD 258
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-----------------LQQ------ 186
L VLK KA D VL+H +T+K K P + QQ
Sbjct: 259 ALVSVLKNAKAFGDK-PVLVHCVTQKGKGYAPAEGAADKLHAVVKFDVVTGQQQKAAGGP 317
Query: 187 ---TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T++F + L D++ M GTGL+LF K FP R FDVGIAEQHAVTFAA
Sbjct: 318 PSYTKVFAQELIKQAEKDDKIVAITAAMPSGTGLDLFGKAFPERTFDVGIAEQHAVTFAA 377
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+AA+G+KPF AIYS+FLQR +DQV HDV +Q LPVRFA+DRAGLVGADGPTH G+FD
Sbjct: 378 GMAADGMKPFAAIYSTFLQRGYDQVVHDVAIQGLPVRFAMDRAGLVGADGPTHAGSFDIG 437
Query: 291 FMACLPNMVVM 301
FM LP MV+M
Sbjct: 438 FMGALPGMVLM 448
>sp|B8GXC4|DXS_CAUCN 1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=dxs PE=3 SV=1
Length = 640
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/371 (41%), Positives = 200/371 (53%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG H++TSISA L G RD G++N
Sbjct: 92 IRTLRQGGGLSGFTKRAESEYDPFGAAHAATSISAAL----------GFCAARDAKGEDN 141
Query: 54 HVISVIVEGATIARMSYEAINNA----------------------GVLNKALKRLHSNPQ 91
VI+VI +G+ A M+YEA+N A G ++ L L S
Sbjct: 142 SVIAVIGDGSLGAGMAYEAMNAATDTTKRLIVILNDNDMSIAPPVGGMSAYLANLVSGGA 201
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
+R + + K +K M E + E G + FFE+LG YYIGP+DGH+++
Sbjct: 202 YRSVRK---LGKTVVEKLPTPMREAARKAEEYARGMVTGGTFFEELGFYYIGPIDGHDMD 258
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-----------------LQQ------ 186
L VLK KA D VL+H +T+K K P + QQ
Sbjct: 259 ALVSVLKNAKAFGDK-PVLVHCVTQKGKGYAPAEGAADKLHAVVKFDVVTGQQQKAAGGP 317
Query: 187 ---TRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T++F + L D++ M GTGL+LF K FP R FDVGIAEQHAVTFAA
Sbjct: 318 PSYTKVFAQELIKQAEKDDKIVAITAAMPSGTGLDLFGKAFPERTFDVGIAEQHAVTFAA 377
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
G+AA+G+KPF AIYS+FLQR +DQV HDV +Q LPVRFA+DRAGLVGADGPTH G+FD
Sbjct: 378 GMAADGMKPFAAIYSTFLQRGYDQVVHDVAIQGLPVRFAMDRAGLVGADGPTHAGSFDIG 437
Query: 291 FMACLPNMVVM 301
FM LP MV+M
Sbjct: 438 FMGALPGMVLM 448
>sp|Q3J1A8|DXS1_RHOS4 1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=dxs1 PE=3 SV=1
Length = 648
Score = 242 bits (617), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 158/371 (42%), Positives = 194/371 (52%), Gaps = 84/371 (22%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
MRT+RQ GL E+ +D FG HSSTSISA L G A+GR+L
Sbjct: 97 MRTLRQKGGLSGFTKRSESAYDPFGAAHSSTSISAAL----------GFAMGRELGQPVG 146
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK------------------ALKR----LHSNPQ 91
I+VI +G+ A M+YEA+N+AG LNK AL R L S
Sbjct: 147 DTIAVIGDGSITAGMAYEALNHAGHLNKRLFVILNDNDMSIAPPVGALARYLVNLSSKAP 206
Query: 92 FRQLCQEAFSSKDKKQKFGGQMHEIDAFSREIEAG--SRACFFEDLGLYYIGPVDGHNLE 149
F L A + G + + +R++ G FE+LG Y+GP+DGH++E
Sbjct: 207 FATLRAAA---DGLEASLPGPLRDGARRARQLVTGMPGGGTLFEELGFTYVGPIDGHDME 263
Query: 150 DLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLK-------------------------- 183
L L+ +A G VLIHV+T+K K P +
Sbjct: 264 ALLQTLRAARARTT-GPVLIHVVTKKGKGYAPAENAPDKYHGVNKFDPVTGEQKKSVANA 322
Query: 184 LQQTRLFCKIL------DNR-------MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
T++F L D R M GTG+++ QK FP R FDVGIAEQHAVTFAA
Sbjct: 323 PNYTKVFGSTLTEEAARDPRIVAITAAMPSGTGVDIMQKRFPNRVFDVGIAEQHAVTFAA 382
Query: 231 GLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTT 290
GLA G+KPFCAIYSSFLQR +DQ+AHDV LQ LPVRF IDRAGLVGADG TH GAFD
Sbjct: 383 GLAGAGMKPFCAIYSSFLQRGYDQIAHDVALQNLPVRFVIDRAGLVGADGATHAGAFDVG 442
Query: 291 FMACLPNMVVM 301
F+ LPNM VM
Sbjct: 443 FITSLPNMTVM 453
>sp|Q2KBR2|DXS_RHIEC 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain
CFN 42 / ATCC 51251) GN=dxs PE=3 SV=1
Length = 638
Score = 241 bits (616), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 202/368 (54%), Gaps = 78/368 (21%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
+RT+RQ GL E+ +D FG HSSTSISAGL GMA+ DL +
Sbjct: 94 IRTLRQENGLSGFTRRAESEYDPFGAAHSSTSISAGL----------GMAIAADLEKTDR 143
Query: 54 HVISVIVEGATIARMSYEAINNAGVLN-KALKRLHSNPQFRQLCQEAFSSKDKK------ 106
VI+VI +GA A M+YEA+NNAG L+ + + L+ N A S+ +
Sbjct: 144 RVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAPPTGAMSAYLARLASGRT 203
Query: 107 ----QKFGGQM-----HEID-AFSREIEAG----SRACFFEDLGLYYIGPVDGHNLEDLA 152
+ FG ++ ID A +R +E + FE++G Y+IGP+DGH+ + L
Sbjct: 204 YMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGGTMFEEMGFYHIGPIDGHSFDHLL 263
Query: 153 YVLKQVKAIPDPGAVLIHVITEKEKAMLPLKL--------------------------QQ 186
VL+ V+ G VLIHV+T+K K P +
Sbjct: 264 PVLRNVRDNAR-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPSY 322
Query: 187 TRLFCKIL------DNRMGG-------GTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLA 233
T +F + L D+++ G GTGL+ + FP RCFDVGIAEQHAVTFAAGLA
Sbjct: 323 TSVFAEALVQEAALDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGLA 382
Query: 234 AEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMA 293
AEG KPF A+YS+FLQR +DQV HDV +Q LPVRF IDRAG VGADGPTH G+FDT F+A
Sbjct: 383 AEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLA 442
Query: 294 CLPNMVVM 301
LP VVM
Sbjct: 443 TLPGFVVM 450
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,347,771
Number of Sequences: 539616
Number of extensions: 4845341
Number of successful extensions: 15571
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 13248
Number of HSP's gapped (non-prelim): 1204
length of query: 309
length of database: 191,569,459
effective HSP length: 117
effective length of query: 192
effective length of database: 128,434,387
effective search space: 24659402304
effective search space used: 24659402304
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)