BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>041268
PSPVLSGNPYPESQNKFISFPVSLFLLFHFLRLFRQELANSQQKNPEDSENKNQRVVLAL
YDALKSRDVETVHKILAPDLEWWFHGPPTHQFMMHLLTGSTTASSASQSSFVFVPLSITS
FGPIVLAEGCDHSRQISWVHAWTVADGIITQVREYFNTSLTVTRFGKDLSGQSQRKKSPP
SDFPSTAEINPVHCPSVWESSVSNRDGKSVPGLVLAL

High Scoring Gene Products

Symbol, full name Information P value
SAG20
AT3G10985 		protein from Arabidopsis thaliana 1.9e-28
AT5G01740 protein from Arabidopsis thaliana 9.1e-25

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041268
        (217 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1006230220 - symbol:SAG20 "AT3G10985" species:...   317  1.9e-28   1
TAIR|locus:2181072 - symbol:AT5G01740 "AT5G01740" species...   257  9.1e-25   2


>TAIR|locus:1006230220 [details] [associations]
            symbol:SAG20 "AT3G10985" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0007568 "aging" evidence=IEP]
            [GO:0009620 "response to fungus" evidence=IEP] EMBL:CP002686
            GO:GO:0006950 GO:GO:0007568 GO:GO:0009620 EMBL:AY045972
            EMBL:AY091355 EMBL:AY088170 EMBL:BT000768 IPI:IPI00655426
            RefSeq:NP_974279.1 UniGene:At.20787 UniGene:At.71454
            ProteinModelPortal:Q94AK6 SMR:Q94AK6 IntAct:Q94AK6 STRING:Q94AK6
            EnsemblPlants:AT3G10985.1 GeneID:2745879 KEGG:ath:AT3G10985
            TAIR:At3g10985 eggNOG:NOG298554 HOGENOM:HOG000029924
            InParanoid:Q94AK6 OMA:REYSNTS PhylomeDB:Q94AK6
            ProtClustDB:CLSN2681308 Genevestigator:Q94AK6 InterPro:IPR009798
            InterPro:IPR016533 Pfam:PF07107 PIRSF:PIRSF007948 Uniprot:Q94AK6
        Length = 110

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 68/124 (54%), Positives = 80/124 (64%)

Query:    94 MHLLTGXXXXXXXXXXXFVFVPLSITSFGPIVLAEGCDHSRQISWVHAWTVADGIITQVR 153
             M +LTG           F FVPLS+ SFG  V+AEGCD +  ISW+HAWTVA+GIITQVR
Sbjct:     1 MRVLTGGVSPSSSS---FEFVPLSVVSFGSTVIAEGCDAATSISWIHAWTVANGIITQVR 57

Query:   154 EYFNTSLTVTRFGKDLSGQSQRKKSPPSDFPSTAEINPVHCPSVWESSVSNRDGKSVPGL 213
             EY NTSLTVTR G  ++G+   + +PPS           HC SVWES  S R GK VPGL
Sbjct:    58 EYSNTSLTVTRIGNVVAGRRSAEIAPPS-----------HCSSVWESQFSGRAGKPVPGL 106

Query:   214 VLAL 217
             VLA+
Sbjct:   107 VLAI 110


>TAIR|locus:2181072 [details] [associations]
            symbol:AT5G01740 "AT5G01740" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AL162351
            HOGENOM:HOG000029924 InterPro:IPR009798 Pfam:PF07107 EMBL:AY075604
            EMBL:BT014870 IPI:IPI00541380 PIR:T48195 RefSeq:NP_195794.1
            UniGene:At.33512 ProteinModelPortal:Q9LZX2 DNASU:831686
            EnsemblPlants:AT5G01740.1 GeneID:831686 KEGG:ath:AT5G01740
            TAIR:At5g01740 eggNOG:NOG315363 InParanoid:Q9LZX2 OMA:CVIAEGW
            PhylomeDB:Q9LZX2 ProtClustDB:CLSN2687137 Genevestigator:Q9LZX2
            Uniprot:Q9LZX2
        Length = 162

 Score = 257 (95.5 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
 Identities = 56/119 (47%), Positives = 71/119 (59%)

Query:    50 ENKNQRVVLALYDALKSRDVETVHKILAPDLEWWFHGPPTHQFMMHLLTGXXXXXXXXXX 109
             E KNQ  +  LY AL+  D  TV K++A D+EWWFHGP   Q MM LLTG          
Sbjct:    15 EMKNQGTIELLYKALQQGDTSTVTKVVASDVEWWFHGPHDCQHMMRLLTGEPPRQVS--- 71

Query:   110 XFVFVPLSITSFGP---IVLAEGCDHSRQISWVHAWTVADGIITQVREYFNTSLTVTRF 165
              F F P S+    P    V+AEG + SR + WVH W + DG++T++REYFNT LTVT +
Sbjct:    72 -FRFEPSSVQVVVPGHDCVIAEGWEGSR-VYWVHVWKLKDGVVTELREYFNTWLTVTDY 128

 Score = 40 (19.1 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query:   196 SVWESSVSNRDGKSVPGLVLAL 217
             +VWES   +    S+P L+LA+
Sbjct:   141 TVWESVPRDLARGSLPSLLLAI 162


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.132   0.409    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      217       194   0.00076  111 3  11 22  0.50    32
                                                     31  0.43    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  185 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.15u 0.39s 16.54t   Elapsed:  00:00:02
  Total cpu time:  16.15u 0.39s 16.54t   Elapsed:  00:00:02
  Start:  Fri May 10 05:35:24 2013   End:  Fri May 10 05:35:26 2013

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