Query 041271
Match_columns 310
No_of_seqs 227 out of 2306
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 08:50:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041271.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041271hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bol_A TSP36, small heat shock 100.0 7.8E-38 2.7E-42 295.4 20.7 197 23-232 97-313 (314)
2 3gla_A Low molecular weight he 99.9 2.4E-24 8.4E-29 170.6 13.8 96 131-232 2-97 (100)
3 1gme_A Heat shock protein 16.9 99.9 4.9E-24 1.7E-28 181.6 10.3 111 129-246 39-150 (151)
4 4eld_A MJ16.5-P1, small heat s 99.9 1.5E-23 5E-28 180.2 12.3 105 133-246 56-161 (161)
5 4fei_A Heat shock protein-rela 99.9 9.2E-23 3.2E-27 162.5 12.0 92 130-232 3-94 (102)
6 3l1e_A Alpha-crystallin A chai 99.9 4.5E-21 1.5E-25 153.9 13.6 100 134-246 3-105 (106)
7 3aab_A Putative uncharacterize 99.9 1.6E-21 5.5E-26 160.2 10.5 91 132-232 23-115 (123)
8 4fei_A Heat shock protein-rela 99.8 6E-21 2E-25 152.0 12.0 92 23-115 5-97 (102)
9 3gla_A Low molecular weight he 99.8 5.3E-21 1.8E-25 151.3 11.6 91 23-114 3-99 (100)
10 2wj5_A Heat shock protein beta 99.8 9.9E-21 3.4E-25 150.6 12.0 95 135-245 3-98 (101)
11 2klr_A Alpha-crystallin B chai 99.8 2.6E-20 8.9E-25 162.2 11.6 105 134-253 64-169 (175)
12 3q9p_A Heat shock protein beta 99.8 8.1E-20 2.8E-24 140.9 10.7 83 138-232 2-84 (85)
13 3aab_A Putative uncharacterize 99.8 1.6E-19 5.5E-24 148.3 8.7 91 23-115 23-118 (123)
14 4eld_A MJ16.5-P1, small heat s 99.8 3.7E-19 1.3E-23 152.6 11.0 91 25-116 57-154 (161)
15 2y1y_A Alpha-crystallin B chai 99.8 7.9E-19 2.7E-23 136.6 11.6 86 139-238 2-88 (90)
16 1gme_A Heat shock protein 16.9 99.8 2.3E-19 7.9E-24 152.6 8.9 93 23-116 42-141 (151)
17 3q9p_A Heat shock protein beta 99.8 1.4E-18 4.8E-23 134.0 9.5 82 29-112 2-84 (85)
18 2wj5_A Heat shock protein beta 99.8 2.1E-18 7.1E-23 137.2 10.6 92 26-120 3-96 (101)
19 3l1e_A Alpha-crystallin A chai 99.8 9.1E-18 3.1E-22 134.6 12.7 89 25-116 3-93 (106)
20 2bol_A TSP36, small heat shock 99.7 4.1E-18 1.4E-22 160.7 10.4 101 132-249 97-201 (314)
21 2y1y_A Alpha-crystallin B chai 99.7 9.5E-17 3.2E-21 124.8 11.0 84 30-116 2-87 (90)
22 2klr_A Alpha-crystallin B chai 99.7 4.2E-16 1.4E-20 135.6 10.6 86 26-114 65-152 (175)
23 1rl1_A Suppressor of G2 allele 98.5 2.8E-07 9.5E-12 73.8 8.2 80 132-232 8-87 (114)
24 2xcm_C SGT1-like protein, cyto 98.5 2.8E-07 9.4E-12 70.7 7.6 79 133-232 2-80 (92)
25 2xcm_C SGT1-like protein, cyto 98.5 8.6E-07 2.9E-11 67.9 10.2 81 24-114 2-82 (92)
26 1rl1_A Suppressor of G2 allele 98.4 5.2E-07 1.8E-11 72.2 7.7 82 23-114 8-89 (114)
27 3igf_A ALL4481 protein; two-do 98.2 2.8E-06 9.4E-11 81.8 7.3 74 23-112 296-369 (374)
28 2k8q_A Protein SHQ1; beta-sand 97.8 8.8E-05 3E-09 61.2 8.6 81 23-117 2-86 (134)
29 3eud_A Protein SHQ1; CS domain 97.7 0.00051 1.7E-08 55.0 11.7 82 22-117 15-100 (115)
30 2k8q_A Protein SHQ1; beta-sand 97.6 0.0001 3.5E-09 60.8 6.3 76 132-232 2-81 (134)
31 3eud_A Protein SHQ1; CS domain 97.6 0.00085 2.9E-08 53.7 11.1 80 128-232 12-95 (115)
32 3igf_A ALL4481 protein; two-do 97.0 0.002 6.8E-08 61.8 8.5 71 134-232 298-369 (374)
33 1wh0_A Ubiquitin carboxyl-term 96.7 0.0089 3E-07 49.2 9.6 91 23-114 18-112 (134)
34 1x5m_A Calcyclin-binding prote 96.7 0.015 5.1E-07 47.1 10.6 80 132-232 19-102 (127)
35 1x5m_A Calcyclin-binding prote 96.6 0.027 9.1E-07 45.5 11.5 81 24-114 20-104 (127)
36 1wh0_A Ubiquitin carboxyl-term 96.6 0.012 4.2E-07 48.3 9.4 87 132-232 18-110 (134)
37 1wgv_A KIAA1068 protein; CS do 96.5 0.032 1.1E-06 44.9 11.1 80 24-113 19-101 (124)
38 2o30_A Nuclear movement protei 96.5 0.014 4.7E-07 47.6 8.9 75 133-232 4-79 (131)
39 2rh0_A NUDC domain-containing 96.4 0.026 8.8E-07 47.5 10.4 87 14-114 3-91 (157)
40 3qor_A Nuclear migration prote 96.3 0.013 4.5E-07 47.1 7.7 78 131-232 14-95 (121)
41 1wgv_A KIAA1068 protein; CS do 96.2 0.033 1.1E-06 44.8 9.8 80 132-232 18-100 (124)
42 2o30_A Nuclear movement protei 96.1 0.046 1.6E-06 44.4 10.0 76 23-112 3-79 (131)
43 1wfi_A Nuclear distribution ge 96.0 0.043 1.5E-06 44.5 9.5 78 24-114 7-88 (131)
44 1wfi_A Nuclear distribution ge 95.9 0.046 1.6E-06 44.3 9.3 77 132-232 6-86 (131)
45 1ejf_A Progesterone receptor P 95.8 0.044 1.5E-06 44.1 8.7 76 135-232 5-80 (125)
46 3qor_A Nuclear migration prote 95.7 0.084 2.9E-06 42.3 10.1 78 24-114 16-97 (121)
47 2rh0_A NUDC domain-containing 95.6 0.071 2.4E-06 44.8 9.7 76 132-232 12-89 (157)
48 1ejf_A Progesterone receptor P 95.1 0.072 2.5E-06 42.9 7.9 78 26-114 5-82 (125)
49 2cg9_X CO-chaperone protein SB 94.7 0.021 7.1E-07 46.8 3.6 84 132-232 5-96 (134)
50 2kmw_A Uncharacterized protein 94.3 0.13 4.4E-06 42.9 7.6 77 132-232 3-80 (150)
51 2cg9_X CO-chaperone protein SB 94.3 0.019 6.6E-07 47.0 2.4 85 23-113 5-97 (134)
52 2kmw_A Uncharacterized protein 93.8 0.15 5.2E-06 42.4 7.0 78 24-114 4-82 (150)
53 1nkw_E 50S ribosomal protein L 67.3 17 0.00057 31.9 7.5 141 47-232 39-203 (212)
54 2cql_A OK/SW-CL.103, 60S ribos 36.4 73 0.0025 24.2 5.7 19 47-65 20-38 (100)
55 2cql_A OK/SW-CL.103, 60S ribos 34.8 60 0.002 24.7 5.0 18 157-178 20-37 (100)
56 1rl6_A Protein (ribosomal prot 29.7 95 0.0033 26.1 5.9 46 47-112 11-56 (177)
57 1rl6_A Protein (ribosomal prot 27.8 1.1E+02 0.0038 25.6 6.0 46 157-232 11-56 (177)
58 1nkw_E 50S ribosomal protein L 25.0 1.4E+02 0.0048 25.9 6.2 46 157-232 39-84 (212)
59 3rd4_A Uncharacterized protein 24.4 48 0.0016 25.5 2.7 36 30-65 32-78 (100)
60 3v2d_H 50S ribosomal protein L 23.9 1.3E+02 0.0044 25.3 5.7 44 47-110 12-55 (180)
61 1vq8_E 50S ribosomal protein L 23.2 1.4E+02 0.0047 25.2 5.7 47 157-232 9-55 (178)
62 2nwt_A UPF0165 protein AF_2212 22.7 1E+02 0.0035 22.0 4.0 32 213-249 3-34 (69)
63 1vq8_E 50S ribosomal protein L 22.7 1.5E+02 0.0052 24.9 5.9 47 47-112 9-55 (178)
64 3j21_F 50S ribosomal protein L 20.8 1.3E+02 0.0044 25.4 5.0 45 157-230 14-58 (184)
No 1
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=100.00 E-value=7.8e-38 Score=295.36 Aligned_cols=197 Identities=16% Similarity=0.159 Sum_probs=154.7
Q ss_pred CCceeeEEEeCC----EEEEEEEcCCCCCCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCccee
Q 041271 23 SNISTRWEYDGD----KIVCKASLPAVRMEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNFKST 98 (310)
Q Consensus 23 ~~~~~dv~E~ed----~y~v~vdLPGv~~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~~~A 98 (310)
..|++|++|+++ .|+|.++||||+++||+|.++++.|+|+|+++.+... .|.+|+|.|+|.||.+|+ .+.++|
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~--~r~~g~F~R~~~LP~~Vd-~e~i~A 173 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGD--AAMSESVGRSIPLPPSVD-RNHIQA 173 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTC--CCBCCCEEEEEECCTTBC-GGGCEE
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCC--CEEEEEEEEEEECCCCcc-ccccEE
Confidence 458999999999 9999999999999999999999999999998754432 288999999999999999 889999
Q ss_pred eee-CCeEEEEeecccccccccc---ccccchh-e-------eeeecceEEEee---cCcEEEEEEecC-CCCCCCCeEE
Q 041271 99 SME-DGVLTVTFTRDAAATANTS---SRSVYKK-V-------IAFLNAVIYWET---SLDKHVLKASLL-PGMKKEDVKI 162 (310)
Q Consensus 99 ~~~-dGvL~I~lPK~~~a~a~~~---s~~~~~~-~-------~~~~~p~vdv~e---t~~~~~i~~~~l-PG~~~edI~V 162 (310)
.|+ ||+|+|++||...+....+ ..+...+ . ........+|.+ +++.|.+.++ | |||++|||+|
T Consensus 174 ~~~~nGVL~I~lPK~~~~~~~I~it~~~ql~Iqp~s~~q~~l~vkg~~~~~i~e~~~~~~~~~v~~~-ldPG~~~edi~V 252 (314)
T 2bol_A 174 TITTDDVLVIEAPVNEPNYKAIKLSPEKGLAIQPSEVQERQLAVKNKEGLEIVTAEDGSKKIHLELK-VDPHFAPKDVKV 252 (314)
T ss_dssp EECSSSEEEEEEEBSSCCTTTEEEETTTEEEECCBCCSSCCSCCCSCCEEEEEECTTSCEEEEEEEE-CCTTCCGGGEEE
T ss_pred EEeCCCEEEEEEeccCcccceeecccCCccCcCCCccccceeecccCCCCcEEEecCCCcEEEEEEE-cCCCCChHHeEE
Confidence 999 9999999999876532211 0111000 0 011123455555 4468888888 9 9999999999
Q ss_pred EEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCcccCCeEEEeeeCCEEEEEEeCC
Q 041271 163 EIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADVRLDDFKTEMEEDGVLTVTFTKP 232 (310)
Q Consensus 163 ~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~vd~~~I~A~l~~dGvL~ItvPK~ 232 (310)
+++++. |+| +|+++.+.+ .|+++|+.||.|.|+|.||++||.++|+|+|+ ||||+|++||.
T Consensus 253 ~v~~~~--LtI--~ge~~~~~~----~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~-dGvL~i~~Pk~ 313 (314)
T 2bol_A 253 WAKGNK--VYV--HGVTGKEEK----TENASHSEHREFYKAFVTPEVVDASKTQAEIV-DGLMVVEAPLF 313 (314)
T ss_dssp EESSSE--EEE--EEEEC----------------CEEEEEEEECSSEECGGGCEEEEE-TTEEEEEEEEE
T ss_pred EEECCE--EEE--EEEEeccCC----ceEEEEEeeeEEEEEEECCCCcChHHeEEEEe-CCEEEEEEecC
Confidence 999999 999 999876543 47889999999999999999999999999999 99999999986
No 2
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.92 E-value=2.4e-24 Score=170.59 Aligned_cols=96 Identities=22% Similarity=0.339 Sum_probs=92.4
Q ss_pred eecceEEEeecCcEEEEEEecCCCCCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCc
Q 041271 131 FLNAVIYWETSLDKHVLKASLLPGMKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADV 210 (310)
Q Consensus 131 ~~~p~vdv~et~~~~~i~~~~lPG~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~v 210 (310)
.|.|++||.++++.|.|.++ ||||+++||+|+++++. |+| +|+++.+...+..+|+++|+.+|.|.|+|.||.++
T Consensus 2 ~~~P~~di~e~~~~~~v~~~-lPG~~~edi~v~~~~~~--L~I--~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~v 76 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYAD-LPGIDPSQIEVQMDKGI--LSI--RGERKSESSTETERFSRIERRYGSFHRRFALPDSA 76 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEE-CTTSCGGGCEEEEETTE--EEE--EEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTB
T ss_pred CccCcEEEEECCCEEEEEEE-CCCCCHHHEEEEEECCE--EEE--EEEEcCcCccCCccEEEEeecceEEEEEEECCCCc
Confidence 47899999999999999999 99999999999999999 999 99998887778889999999999999999999999
Q ss_pred ccCCeEEEeeeCCEEEEEEeCC
Q 041271 211 RLDDFKTEMEEDGVLTVTFTKP 232 (310)
Q Consensus 211 d~~~I~A~l~~dGvL~ItvPK~ 232 (310)
|.+.|+|+|+ ||+|+|++||.
T Consensus 77 d~~~i~A~~~-~GvL~I~~pK~ 97 (100)
T 3gla_A 77 DADGITAAGR-NGVLEIRIPKR 97 (100)
T ss_dssp CTTSCEEEEE-TTEEEEEEEBC
T ss_pred ChHHeEEEEe-CCEEEEEEecC
Confidence 9999999999 99999999998
No 3
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.90 E-value=4.9e-24 Score=181.56 Aligned_cols=111 Identities=40% Similarity=0.630 Sum_probs=99.9
Q ss_pred eeeecceEEEeecCcEEEEEEecCCCCCCCCeEEEEE-CCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECC
Q 041271 129 IAFLNAVIYWETSLDKHVLKASLLPGMKKEDVKIEIE-DDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLP 207 (310)
Q Consensus 129 ~~~~~p~vdv~et~~~~~i~~~~lPG~~~edI~V~v~-~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP 207 (310)
...+.|++||+++++.|+|.++ |||++++||+|+++ ++. |+| +|+++.+.+.++.+|+++|+.+|.|.|+|.||
T Consensus 39 ~~~~~p~~di~e~~d~~~v~~d-lPGv~kedI~V~v~~~~~--L~I--~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP 113 (151)
T 1gme_A 39 AAFANARMDWKETPEAHVFKAD-LPGVKKEEVKVEVEDGNV--LVV--SGERTKEKEDKNDKWHRVERSSGKFVRRFRLL 113 (151)
T ss_dssp HHHGGGCEEEEECSSEEEEEEE-CTTCCGGGEEEEEETTTE--EEE--EECCCCCCCCTTCEEEECCCCCCCEEEEEECS
T ss_pred ccccCCceEEEEcCCEEEEEEE-CCCCChHHEEEEEecCCE--EEE--EEEEccccccCCceEEEEeEeccEEEEEEECC
Confidence 3457799999999999999999 99999999999996 567 999 99988877777889999999999999999999
Q ss_pred CCcccCCeEEEeeeCCEEEEEEeCCCCCCCCCceEEEEe
Q 041271 208 ADVRLDDFKTEMEEDGVLTVTFTKPIKPKKTQQQLISKL 246 (310)
Q Consensus 208 ~~vd~~~I~A~l~~dGvL~ItvPK~~~~~~~~~r~I~I~ 246 (310)
.+||.+.|+|+|+ ||+|+|++||. ++.+++.++|+|+
T Consensus 114 ~~vd~~~i~A~~~-nGvL~I~lPK~-~~~~~~~~~I~I~ 150 (151)
T 1gme_A 114 EDAKVEEVKAGLE-NGVLTVTVPKA-EVKKPEVKAIQIS 150 (151)
T ss_dssp SCCCGGGCEEEEE-TTEEEEEEECC-CCCTTCCCCCCCC
T ss_pred CCccccceEEEEE-CCEEEEEEEcc-CcCCCCCeEeeeC
Confidence 9999999999999 99999999999 4455556778774
No 4
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.90 E-value=1.5e-23 Score=180.16 Aligned_cols=105 Identities=24% Similarity=0.277 Sum_probs=95.6
Q ss_pred cceEEEeecCcEEEEEEecCCCCCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEee-ecceEEEEEECCCCcc
Q 041271 133 NAVIYWETSLDKHVLKASLLPGMKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEF-TDGKIIRRFKLPADVR 211 (310)
Q Consensus 133 ~p~vdv~et~~~~~i~~~~lPG~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~-~~g~F~R~~~LP~~vd 211 (310)
.+++||.++++.|+|.++ |||++++||+|+++++. |+| +|+++.+...++.+|+++|+ .+|.|.|+|.||.+||
T Consensus 56 ~~pvdi~e~~~~~~v~~d-lPG~~~edi~V~~~~~~--L~I--~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd 130 (161)
T 4eld_A 56 FMPISIIEGDQHIKVIAW-LPGVNKEDIILNAVGDT--LEI--RAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVK 130 (161)
T ss_dssp CCCEEEEECSSEEEEEEE-CTTCCGGGEEEEEETTE--EEE--EEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBC
T ss_pred ccceeEEEeCCEEEEEEE-CCCCChHhEEEEEECCE--EEE--EEEEcccccCCCceEEEEEeeccccEEEEEECCCCcc
Confidence 345999999999999999 99999999999999999 999 99988766667778999999 9999999999999999
Q ss_pred cCCeEEEeeeCCEEEEEEeCCCCCCCCCceEEEEe
Q 041271 212 LDDFKTEMEEDGVLTVTFTKPIKPKKTQQQLISKL 246 (310)
Q Consensus 212 ~~~I~A~l~~dGvL~ItvPK~~~~~~~~~r~I~I~ 246 (310)
.+.|+|+|+ ||+|+|++||. +..++ ++|+|+
T Consensus 131 ~~~i~A~~~-nGvL~I~lpK~-~~~~~--r~I~Ie 161 (161)
T 4eld_A 131 EENASAKFE-NGVLSVILPKA-ESSIK--KGINIE 161 (161)
T ss_dssp GGGCEEEEE-TTEEEEEEEBC-GGGSC--CCCCCC
T ss_pred cccEEEEEE-CCEEEEEEEcC-CCCCC--cEeecC
Confidence 999999999 99999999999 44444 888874
No 5
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.89 E-value=9.2e-23 Score=162.49 Aligned_cols=92 Identities=22% Similarity=0.306 Sum_probs=86.9
Q ss_pred eeecceEEEeecCcEEEEEEecCCCCCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCC
Q 041271 130 AFLNAVIYWETSLDKHVLKASLLPGMKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPAD 209 (310)
Q Consensus 130 ~~~~p~vdv~et~~~~~i~~~~lPG~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~ 209 (310)
+.+.|++||.++++.|.|.++ |||++++||+|+++++. |+| +|+++. ..+|+++|+.+|.|.|+|.||.+
T Consensus 3 g~~~P~~di~e~~~~~~v~~~-lPG~~~edi~v~~~~~~--L~I--~g~~~~-----~~~~~~~er~~g~f~R~~~LP~~ 72 (102)
T 4fei_A 3 GPWTPAADWRDAGTHLDLLLD-VPGVDAGTLALAEDGGQ--LTV--SGERPG-----TEHLLRSERPSGRFVRELAFPEP 72 (102)
T ss_dssp EECCCCEEEEEETTEEEEEEE-CTTCCGGGCEEEEETTE--EEE--EEEECC-----CSSCSSCCSEEEEEEEEEECSSC
T ss_pred CcccCcEEEEEcCCEEEEEEE-CCCCchHhEEEEEECCE--EEE--EEEEec-----CCCEEEEEEeccEEEEEEECCCC
Confidence 568899999999999999999 99999999999999999 999 999743 36788899999999999999999
Q ss_pred cccCCeEEEeeeCCEEEEEEeCC
Q 041271 210 VRLDDFKTEMEEDGVLTVTFTKP 232 (310)
Q Consensus 210 vd~~~I~A~l~~dGvL~ItvPK~ 232 (310)
+|.+.|+|+|+ ||+|+|++||.
T Consensus 73 vd~~~i~A~~~-~GvL~I~lpK~ 94 (102)
T 4fei_A 73 VRPASGVASLA-GGVLTVRFEKL 94 (102)
T ss_dssp BCTTCCEEEEE-TTEEEEEEEBS
T ss_pred cchhHcEEEEE-CCEEEEEEEcc
Confidence 99999999999 99999999999
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.86 E-value=4.5e-21 Score=153.92 Aligned_cols=100 Identities=18% Similarity=0.288 Sum_probs=84.8
Q ss_pred ceEEEeecCcEEEEEEecCCCCCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCcccC
Q 041271 134 AVIYWETSLDKHVLKASLLPGMKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADVRLD 213 (310)
Q Consensus 134 p~vdv~et~~~~~i~~~~lPG~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~vd~~ 213 (310)
...||+++++.|.|.++ ||||+++||+|+++++. |+| +|+++.... ...|+++ +|.|+|.||.+||.+
T Consensus 3 g~~~i~e~~~~~~v~~d-lPG~~~edi~V~v~~~~--L~I--~g~~~~~~~--~~~~~~~-----eF~R~~~LP~~vd~~ 70 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLD-VKHFSPEDLTVKVQEDF--VEI--HGKHNERQD--DHGYISR-----EFHRRYRLPSNVDQS 70 (106)
T ss_dssp CSEEEEECSSEEEEEEE-CTTSCGGGEEEEEETTE--EEE--EEEEEEEET--TTEEEEE-----EEEEEEECCTTBCTT
T ss_pred CceEEEEcCCEEEEEEE-CCCCChHHEEEEEECCE--EEE--EEEEccccC--CCCEEEE-----EEEEEEECCCCcChh
Confidence 45799999999999999 99999999999999999 999 998765432 3446543 499999999999999
Q ss_pred CeEEEe-eeCCEEEEEEeCCCCCC--CCCceEEEEe
Q 041271 214 DFKTEM-EEDGVLTVTFTKPIKPK--KTQQQLISKL 246 (310)
Q Consensus 214 ~I~A~l-~~dGvL~ItvPK~~~~~--~~~~r~I~I~ 246 (310)
.|+|.| + ||+|+|++||...+. ..+.|+|+|+
T Consensus 71 ~i~A~~s~-~GvL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 71 ALSCSLSA-DGMLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp SCEEEECT-TSEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred HcEEEECC-CCEEEEEEEccCcccccCCCCeEeeec
Confidence 999999 8 999999999994332 2456899885
No 7
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.85 E-value=1.6e-21 Score=160.23 Aligned_cols=91 Identities=23% Similarity=0.247 Sum_probs=85.9
Q ss_pred ecceEEEeecCcEEEEEEecCCCCCCCCeEEEEEC-CeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCc
Q 041271 132 LNAVIYWETSLDKHVLKASLLPGMKKEDVKIEIED-DGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADV 210 (310)
Q Consensus 132 ~~p~vdv~et~~~~~i~~~~lPG~~~edI~V~v~~-~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~v 210 (310)
+.|++||.++++.|.|.++ |||++++||+|++++ +. |+| +|+++.+. +.+|+++|+.+ .|.|+|.||.++
T Consensus 23 ~~P~~di~e~~~~~~v~~~-lPG~~~edi~V~v~~~~~--L~I--~g~~~~~~---~~~~~~~Er~~-~f~R~~~LP~~v 93 (123)
T 3aab_A 23 VYPPVDMYEEGGYLVVVAD-LAGFNKEKIKARVSGQNE--LII--EAEREITE---PGVKYLTQRPK-YVRKVIRLPYNV 93 (123)
T ss_dssp HCSCEEEEEETTEEEEEEE-CCSCCGGGCEEEEETTTE--EEE--EEECCCCC---CSCEEEECSCS-EEEEEEECSSEE
T ss_pred CCCcEEEEEcCCEEEEEEE-CCCCCHHHEEEEEeCCCE--EEE--EEEEeccC---CCeEEEEEEeE-EEEEEEECCCCc
Confidence 4589999999999999999 999999999999999 88 999 99976644 67899999999 999999999999
Q ss_pred ccCCe-EEEeeeCCEEEEEEeCC
Q 041271 211 RLDDF-KTEMEEDGVLTVTFTKP 232 (310)
Q Consensus 211 d~~~I-~A~l~~dGvL~ItvPK~ 232 (310)
|.++| +|.|+ ||+|+|++||.
T Consensus 94 d~~~i~~A~~~-~GvL~I~lPK~ 115 (123)
T 3aab_A 94 AKDAEISGKYE-NGVLTIRIPIA 115 (123)
T ss_dssp CTTCCCEEEEE-TTEEEEEEEGG
T ss_pred CcchhCeeEEc-CCEEEEEEEcC
Confidence 99999 99999 99999999999
No 8
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.85 E-value=6e-21 Score=151.97 Aligned_cols=92 Identities=20% Similarity=0.245 Sum_probs=84.9
Q ss_pred CCceeeEEEeCCEEEEEEEcCCCCCCceEEEEeCCEEEEEEEEEec-ccceeEEeecceEEeeeCCcccCcCCcceeeee
Q 041271 23 SNISTRWEYDGDKIVCKASLPAVRMEDVKIDINDKELTLTRELNIA-DGGTILRRFLKVSRNFDLPDGVKRSNFKSTSME 101 (310)
Q Consensus 23 ~~~~~dv~E~ed~y~v~vdLPGv~~edI~V~v~~~~L~I~g~~~~~-~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~~ 101 (310)
..|++||+|+++.|+|.++||||+++||+|.++++.|+|+|+++.+ .+...||.+|+|.|+|.||..++ .+.++|.|+
T Consensus 5 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd-~~~i~A~~~ 83 (102)
T 4fei_A 5 WTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVR-PASGVASLA 83 (102)
T ss_dssp CCCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBC-TTCCEEEEE
T ss_pred ccCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcc-hhHcEEEEE
Confidence 4689999999999999999999999999999999999999998754 35677899999999999999999 889999999
Q ss_pred CCeEEEEeeccccc
Q 041271 102 DGVLTVTFTRDAAA 115 (310)
Q Consensus 102 dGvL~I~lPK~~~a 115 (310)
||+|+|++||...+
T Consensus 84 ~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 84 GGVLTVRFEKLRPT 97 (102)
T ss_dssp TTEEEEEEEBSSCC
T ss_pred CCEEEEEEEccCcc
Confidence 99999999998653
No 9
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.85 E-value=5.3e-21 Score=151.31 Aligned_cols=91 Identities=20% Similarity=0.302 Sum_probs=82.1
Q ss_pred CCceeeEEEeCCEEEEEEEcCCCCCCceEEEEeCCEEEEEEEEEecc------cceeEEeecceEEeeeCCcccCcCCcc
Q 041271 23 SNISTRWEYDGDKIVCKASLPAVRMEDVKIDINDKELTLTRELNIAD------GGTILRRFLKVSRNFDLPDGVKRSNFK 96 (310)
Q Consensus 23 ~~~~~dv~E~ed~y~v~vdLPGv~~edI~V~v~~~~L~I~g~~~~~~------~~~~er~~g~f~R~~~LP~~vd~~~~~ 96 (310)
..|++||.|+++.|+|.++||||+++||+|.++++.|+|+|+++.+. +...||.+|+|.|+|.||..++ .+.+
T Consensus 3 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd-~~~i 81 (100)
T 3gla_A 3 WVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSAD-ADGI 81 (100)
T ss_dssp SCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBC-TTSC
T ss_pred ccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcC-hHHe
Confidence 46899999999999999999999999999999999999999997542 3456788999999999999999 8899
Q ss_pred eeeeeCCeEEEEeecccc
Q 041271 97 STSMEDGVLTVTFTRDAA 114 (310)
Q Consensus 97 ~A~~~dGvL~I~lPK~~~ 114 (310)
+|.|+||+|+|++||.+.
T Consensus 82 ~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 82 TAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp EEEEETTEEEEEEEBC--
T ss_pred EEEEeCCEEEEEEecCCC
Confidence 999999999999999865
No 10
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.84 E-value=9.9e-21 Score=150.63 Aligned_cols=95 Identities=16% Similarity=0.267 Sum_probs=81.0
Q ss_pred eEEEeecCcEEEEEEecCCCCCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCcccCC
Q 041271 135 VIYWETSLDKHVLKASLLPGMKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADVRLDD 214 (310)
Q Consensus 135 ~vdv~et~~~~~i~~~~lPG~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~vd~~~ 214 (310)
.+||+++++.|.|.++ ||||+++||+|+++++. |+| +|+++.+. ++.+|+++| |.|+|.||.+||.+.
T Consensus 3 ~vdi~e~~~~~~v~~d-lPG~~~edI~V~v~~~~--L~I--~g~~~~~~--~~~~~~~~e-----F~R~~~LP~~vd~~~ 70 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLD-VKHFSPEEISVKVVGDH--VEV--HARHEERP--DEHGFIARE-----FHRRYRLPPGVDPAA 70 (101)
T ss_dssp CCCCCCCSSCEEEEEE-CTTSCGGGEEEEEETTE--EEE--EEEEEECS--STTCCEEEE-----EEEEEECCTTBCTTC
T ss_pred cEEEEEeCCEEEEEEE-CCCCcHHHeEEEEECCE--EEE--EEEEeccc--CCCCEEEEE-----EEEEEECCCCcChhH
Confidence 4789999999999999 99999999999999999 999 99987543 344566554 999999999999999
Q ss_pred eEEEe-eeCCEEEEEEeCCCCCCCCCceEEEE
Q 041271 215 FKTEM-EEDGVLTVTFTKPIKPKKTQQQLISK 245 (310)
Q Consensus 215 I~A~l-~~dGvL~ItvPK~~~~~~~~~r~I~I 245 (310)
|+|.| + ||+|+|++||. ++.++ +.++|
T Consensus 71 i~A~~s~-nGvL~I~lPK~-~~~~~--~~~~i 98 (101)
T 2wj5_A 71 VTSALSP-EGVLSIQATPA-SAQAS--LPSPP 98 (101)
T ss_dssp CEEEECT-TSEEEEEECBC-CCCCS--SCC--
T ss_pred CEEEECC-CCEEEEEEECC-CcCCC--CCCcc
Confidence 99999 8 99999999999 55555 44443
No 11
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.83 E-value=2.6e-20 Score=162.20 Aligned_cols=105 Identities=18% Similarity=0.252 Sum_probs=73.3
Q ss_pred ceEEEeecCcEEEEEEecCCCCCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCcccC
Q 041271 134 AVIYWETSLDKHVLKASLLPGMKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADVRLD 213 (310)
Q Consensus 134 p~vdv~et~~~~~i~~~~lPG~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~vd~~ 213 (310)
..+||.++++.|.|.++ ||||++|||+|+++++. |+| +|+++.+. ++.+|+.+| |.|+|.||.+||.+
T Consensus 64 ~~~dv~e~~d~~~v~~d-lPG~~~edI~V~v~~~~--L~I--~g~~~~~~--~~~~~~~re-----F~R~~~LP~~Vd~~ 131 (175)
T 2klr_A 64 GLSEMRLEKDRFSVNLD-VKHFSPEELKVKVLGDV--IEV--HGKHEERQ--DEHGFISRE-----FHRKYRIPADVDPL 131 (175)
T ss_dssp -----CCCCSEEEEEEC-CSSCCGGGEEEEEETTE--EEE--EEEEEEEE--ETTEEEEEE-----EEEEEECTTTCCTT
T ss_pred CceEEEEcCCeEEEEEE-CCCCChHHEEEEEECCE--EEE--EEEEcccc--cCCceEEEE-----EEEEEECCCCcChh
Confidence 45799999999999999 99999999999999999 999 99986543 234566544 99999999999999
Q ss_pred CeEEEe-eeCCEEEEEEeCCCCCCCCCceEEEEecCccccc
Q 041271 214 DFKTEM-EEDGVLTVTFTKPIKPKKTQQQLISKLLGFLAKA 253 (310)
Q Consensus 214 ~I~A~l-~~dGvL~ItvPK~~~~~~~~~r~I~I~~~~~~~~ 253 (310)
.|+|+| + ||+|+|++||.+ ..+ ..|+|+|+.++..+.
T Consensus 132 ~i~A~~s~-dGvL~I~lPK~~-~~~-~~r~I~I~~~~~~~~ 169 (175)
T 2klr_A 132 TITSSLSS-DGVLTVNGPRKQ-VSG-PERTIPITREEKPAV 169 (175)
T ss_dssp TCEEEECT-TSCEEEEEECC---------------------
T ss_pred HeEEEEcC-CCEEEEEEECCC-CCC-CCeEEEEecCCcccc
Confidence 999999 8 999999999983 222 359999988754443
No 12
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.81 E-value=8.1e-20 Score=140.92 Aligned_cols=83 Identities=13% Similarity=0.302 Sum_probs=70.4
Q ss_pred EeecCcEEEEEEecCCCCCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCcccCCeEE
Q 041271 138 WETSLDKHVLKASLLPGMKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADVRLDDFKT 217 (310)
Q Consensus 138 v~et~~~~~i~~~~lPG~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~vd~~~I~A 217 (310)
+.|+++.|.|.++ ||||+++||+|+++++. |+| +|+++.+... .. +.+|+|.|+|.||.+||.+.|+|
T Consensus 2 ~~E~~~~~~v~~d-lPG~~~edi~V~v~~~~--L~I--~g~~~~~~~~--~~-----~~~~~F~R~~~LP~~vd~~~i~A 69 (85)
T 3q9p_A 2 GSHTADRWRVSLD-VNHFAPDELTVKTKDGV--VEI--TGKHAARQDE--HG-----YISRCFTRKYTLPPGVDPTQVSS 69 (85)
T ss_dssp -CCCCCEEEEEEE-CTTTCCSEEEEEEETTE--EEE--EEEEC--------------CCCEEEEEEEECCTTCCGGGCEE
T ss_pred ccCcCCEEEEEEE-CCCCChHHEEEEEECCE--EEE--EEEEccccCC--CC-----EEEEEEEEEEECCCCcChHHcEE
Confidence 4689999999999 99999999999999999 999 9998764322 12 24689999999999999999999
Q ss_pred EeeeCCEEEEEEeCC
Q 041271 218 EMEEDGVLTVTFTKP 232 (310)
Q Consensus 218 ~l~~dGvL~ItvPK~ 232 (310)
.|.+||+|+|++||.
T Consensus 70 ~~~~~GvL~I~lPK~ 84 (85)
T 3q9p_A 70 SLSPEGTLTVEAPMP 84 (85)
T ss_dssp EECTTSEEEEEEECC
T ss_pred EECCCCEEEEEEEcC
Confidence 996699999999997
No 13
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.79 E-value=1.6e-19 Score=148.27 Aligned_cols=91 Identities=23% Similarity=0.275 Sum_probs=82.2
Q ss_pred CCceeeEEEeCCEEEEEEEcCCCCCCceEEEEeC-CEEEEEEEEEecc---cceeEEeecceEEeeeCCcccCcCCcc-e
Q 041271 23 SNISTRWEYDGDKIVCKASLPAVRMEDVKIDIND-KELTLTRELNIAD---GGTILRRFLKVSRNFDLPDGVKRSNFK-S 97 (310)
Q Consensus 23 ~~~~~dv~E~ed~y~v~vdLPGv~~edI~V~v~~-~~L~I~g~~~~~~---~~~~er~~g~f~R~~~LP~~vd~~~~~-~ 97 (310)
..|++||.|+++.|+|.++||||+++||+|.+++ +.|+|+|+++.+. +...||.+ +|.|+|.||..++ .+.+ +
T Consensus 23 ~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~-~f~R~~~LP~~vd-~~~i~~ 100 (123)
T 3aab_A 23 VYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPK-YVRKVIRLPYNVA-KDAEIS 100 (123)
T ss_dssp HCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCS-EEEEEEECSSEEC-TTCCCE
T ss_pred CCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeE-EEEEEEECCCCcC-cchhCe
Confidence 4589999999999999999999999999999999 9999999987643 34567778 9999999999999 7888 9
Q ss_pred eeeeCCeEEEEeeccccc
Q 041271 98 TSMEDGVLTVTFTRDAAA 115 (310)
Q Consensus 98 A~~~dGvL~I~lPK~~~a 115 (310)
|.|+||+|+|++||...+
T Consensus 101 A~~~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 101 GKYENGVLTIRIPIAGTS 118 (123)
T ss_dssp EEEETTEEEEEEEGGGEE
T ss_pred eEEcCCEEEEEEEcCCCC
Confidence 999999999999998654
No 14
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.79 E-value=3.7e-19 Score=152.64 Aligned_cols=91 Identities=21% Similarity=0.214 Sum_probs=82.1
Q ss_pred ceeeEEEeCCEEEEEEEcCCCCCCceEEEEeCCEEEEEEEEEec------ccceeEE-eecceEEeeeCCcccCcCCcce
Q 041271 25 ISTRWEYDGDKIVCKASLPAVRMEDVKIDINDKELTLTRELNIA------DGGTILR-RFLKVSRNFDLPDGVKRSNFKS 97 (310)
Q Consensus 25 ~~~dv~E~ed~y~v~vdLPGv~~edI~V~v~~~~L~I~g~~~~~------~~~~~er-~~g~f~R~~~LP~~vd~~~~~~ 97 (310)
+++||+|+++.|+|.++||||+++||+|.++++.|+|+|+++.+ .+...|| .+|.|.|+|.||..|| .+.++
T Consensus 57 ~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd-~~~i~ 135 (161)
T 4eld_A 57 MPISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVK-EENAS 135 (161)
T ss_dssp CCEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBC-GGGCE
T ss_pred cceeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcc-cccEE
Confidence 45999999999999999999999999999999999999998762 2345678 8999999999999999 88899
Q ss_pred eeeeCCeEEEEeecccccc
Q 041271 98 TSMEDGVLTVTFTRDAAAT 116 (310)
Q Consensus 98 A~~~dGvL~I~lPK~~~a~ 116 (310)
|.|+||+|+|++||.+.+.
T Consensus 136 A~~~nGvL~I~lpK~~~~~ 154 (161)
T 4eld_A 136 AKFENGVLSVILPKAESSI 154 (161)
T ss_dssp EEEETTEEEEEEEBCGGGS
T ss_pred EEEECCEEEEEEEcCCCCC
Confidence 9999999999999986643
No 15
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.79 E-value=7.9e-19 Score=136.64 Aligned_cols=86 Identities=21% Similarity=0.355 Sum_probs=69.6
Q ss_pred eecCcEEEEEEecCCCCCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCcccCCeEEE
Q 041271 139 ETSLDKHVLKASLLPGMKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADVRLDDFKTE 218 (310)
Q Consensus 139 ~et~~~~~i~~~~lPG~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~vd~~~I~A~ 218 (310)
.++++.|.|.++ ||||+++||+|+++++. |+| +|+++.+. +..+|+++ .|.|+|.||.+||.+.|+|.
T Consensus 2 k~~~~~~~v~~d-lPG~~~edi~V~v~~~~--L~I--~g~~~~~~--~~~~~~~~-----ef~R~~~LP~~vd~~~i~A~ 69 (90)
T 2y1y_A 2 AMEKDRFSVNLD-VKHFSPEELKVKVLGDV--IEV--HGKHEERQ--DEHGFISR-----EFHRKYRIPADVDPLTITSS 69 (90)
T ss_dssp ----CCEEEEEE-CTTSCGGGEEEEEETTE--EEE--EEEEEEEE--CSSSEEEE-----EEEEEEECCTTBCGGGCEEE
T ss_pred CcCCCEEEEEEE-CCCCcHHHeEEEEECCE--EEE--EEEEeccc--CCCCEEEE-----EEEEEEECCCCcChhHcEEE
Confidence 368899999999 99999999999999999 999 99987543 34556654 49999999999999999999
Q ss_pred e-eeCCEEEEEEeCCCCCCCC
Q 041271 219 M-EEDGVLTVTFTKPIKPKKT 238 (310)
Q Consensus 219 l-~~dGvL~ItvPK~~~~~~~ 238 (310)
| + ||+|+|++||. ++.++
T Consensus 70 ~~~-~GvL~I~~pK~-~~~~p 88 (90)
T 2y1y_A 70 MSS-DGVLTVNGPRK-QVSGP 88 (90)
T ss_dssp ECT-TSEEEEEECBC------
T ss_pred ECC-CCEEEEEEEcC-CCCCC
Confidence 9 8 99999999998 44443
No 16
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.78 E-value=2.3e-19 Score=152.60 Aligned_cols=93 Identities=28% Similarity=0.402 Sum_probs=83.0
Q ss_pred CCceeeEEEeCCEEEEEEEcCCCCCCceEEEE-eCCEEEEEEEEEecc------cceeEEeecceEEeeeCCcccCcCCc
Q 041271 23 SNISTRWEYDGDKIVCKASLPAVRMEDVKIDI-NDKELTLTRELNIAD------GGTILRRFLKVSRNFDLPDGVKRSNF 95 (310)
Q Consensus 23 ~~~~~dv~E~ed~y~v~vdLPGv~~edI~V~v-~~~~L~I~g~~~~~~------~~~~er~~g~f~R~~~LP~~vd~~~~ 95 (310)
..|++||+|+++.|+|.++||||+++||+|.+ +++.|+|+|+++.+. +...||.+|+|.|+|.||..|+ .+.
T Consensus 42 ~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd-~~~ 120 (151)
T 1gme_A 42 ANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAK-VEE 120 (151)
T ss_dssp GGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCC-GGG
T ss_pred cCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCcc-ccc
Confidence 46899999999999999999999999999999 578999999987532 2456788999999999999999 889
Q ss_pred ceeeeeCCeEEEEeecccccc
Q 041271 96 KSTSMEDGVLTVTFTRDAAAT 116 (310)
Q Consensus 96 ~~A~~~dGvL~I~lPK~~~a~ 116 (310)
++|.|+||+|+|++||.....
T Consensus 121 i~A~~~nGvL~I~lPK~~~~~ 141 (151)
T 1gme_A 121 VKAGLENGVLTVTVPKAEVKK 141 (151)
T ss_dssp CEEEEETTEEEEEEECCCCCT
T ss_pred eEEEEECCEEEEEEEccCcCC
Confidence 999999999999999987543
No 17
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.77 E-value=1.4e-18 Score=133.95 Aligned_cols=82 Identities=17% Similarity=0.190 Sum_probs=69.6
Q ss_pred EEEeCCEEEEEEEcCCCCCCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCcceeeee-CCeEEE
Q 041271 29 WEYDGDKIVCKASLPAVRMEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNFKSTSME-DGVLTV 107 (310)
Q Consensus 29 v~E~ed~y~v~vdLPGv~~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~~-dGvL~I 107 (310)
+.|+++.|.|.++||||+++||+|.++++.|+|+|+++..... ....+|+|.|+|.||.+|| .+.++|.|. ||+|+|
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~-~~~~~~~F~R~~~LP~~vd-~~~i~A~~~~~GvL~I 79 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDE-HGYISRCFTRKYTLPPGVD-PTQVSSSLSPEGTLTV 79 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC--------CCCEEEEEEEECCTTCC-GGGCEEEECTTSEEEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCC-CCEEEEEEEEEEECCCCcC-hHHcEEEECCCCEEEE
Confidence 4689999999999999999999999999999999998754221 1224689999999999999 889999998 999999
Q ss_pred Eeecc
Q 041271 108 TFTRD 112 (310)
Q Consensus 108 ~lPK~ 112 (310)
++||.
T Consensus 80 ~lPK~ 84 (85)
T 3q9p_A 80 EAPMP 84 (85)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 99985
No 18
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.76 E-value=2.1e-18 Score=137.15 Aligned_cols=92 Identities=15% Similarity=0.251 Sum_probs=78.8
Q ss_pred eeeEEEeCCEEEEEEEcCCCCCCceEEEEeCCEEEEEEEEEecc-cceeEEeecceEEeeeCCcccCcCCcceeee-eCC
Q 041271 26 STRWEYDGDKIVCKASLPAVRMEDVKIDINDKELTLTRELNIAD-GGTILRRFLKVSRNFDLPDGVKRSNFKSTSM-EDG 103 (310)
Q Consensus 26 ~~dv~E~ed~y~v~vdLPGv~~edI~V~v~~~~L~I~g~~~~~~-~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~-~dG 103 (310)
.+||+|+++.|.|.++||||+++||+|.++++.|+|+|+++... ...+.++ .|.|+|.||.+|| .+.++|.| +||
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~--eF~R~~~LP~~vd-~~~i~A~~s~nG 79 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAR--EFHRRYRLPPGVD-PAAVTSALSPEG 79 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEE--EEEEEEECCTTBC-TTCCEEEECTTS
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEE--EEEEEEECCCCcC-hhHCEEEECCCC
Confidence 47999999999999999999999999999999999999997642 2233222 3999999999999 88999999 899
Q ss_pred eEEEEeecccccccccc
Q 041271 104 VLTVTFTRDAAATANTS 120 (310)
Q Consensus 104 vL~I~lPK~~~a~a~~~ 120 (310)
+|+|++|+.....+.+.
T Consensus 80 vL~I~lPK~~~~~~~~~ 96 (101)
T 2wj5_A 80 VLSIQATPASAQASLPS 96 (101)
T ss_dssp EEEEEECBCCCCCSSCC
T ss_pred EEEEEEECCCcCCCCCC
Confidence 99999999877655443
No 19
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.75 E-value=9.1e-18 Score=134.61 Aligned_cols=89 Identities=20% Similarity=0.253 Sum_probs=77.3
Q ss_pred ceeeEEEeCCEEEEEEEcCCCCCCceEEEEeCCEEEEEEEEEec-ccceeEEeecceEEeeeCCcccCcCCcceeee-eC
Q 041271 25 ISTRWEYDGDKIVCKASLPAVRMEDVKIDINDKELTLTRELNIA-DGGTILRRFLKVSRNFDLPDGVKRSNFKSTSM-ED 102 (310)
Q Consensus 25 ~~~dv~E~ed~y~v~vdLPGv~~edI~V~v~~~~L~I~g~~~~~-~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~-~d 102 (310)
...||+|+++.|+|.++||||+++||+|.++++.|+|+|+++.. +..++. ++.|.|+|.||.+|| .+.++|.| +|
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~--~~eF~R~~~LP~~vd-~~~i~A~~s~~ 79 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYI--SREFHRRYRLPSNVD-QSALSCSLSAD 79 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEE--EEEEEEEEECCTTBC-TTSCEEEECTT
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEE--EEEEEEEEECCCCcC-hhHcEEEECCC
Confidence 45899999999999999999999999999999999999998643 222322 345999999999999 89999999 89
Q ss_pred CeEEEEeecccccc
Q 041271 103 GVLTVTFTRDAAAT 116 (310)
Q Consensus 103 GvL~I~lPK~~~a~ 116 (310)
|+|+|++||...+.
T Consensus 80 GvL~I~~PK~~~~~ 93 (106)
T 3l1e_A 80 GMLTFSGPKIPSGV 93 (106)
T ss_dssp SEEEEEEEBCCCCT
T ss_pred CEEEEEEEccCccc
Confidence 99999999987753
No 20
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.74 E-value=4.1e-18 Score=160.72 Aligned_cols=101 Identities=15% Similarity=0.150 Sum_probs=86.7
Q ss_pred ecceEEEeecCc----EEEEEEecCCCCCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECC
Q 041271 132 LNAVIYWETSLD----KHVLKASLLPGMKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLP 207 (310)
Q Consensus 132 ~~p~vdv~et~~----~~~i~~~~lPG~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP 207 (310)
+.|++|++|+++ +|.|.++ ||||++|||+|+++++. |+| +|+++.+.+ . ++.+|.|.|+|.||
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~d-lPG~~~edI~V~v~~~~--L~I--~ge~~~~~e--~------~r~~g~F~R~~~LP 163 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFN-VKNFKAEEITIKADKNK--LVV--RAQKSVACG--D------AAMSESVGRSIPLP 163 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEE-CTTCCTTTEEEEEETTE--EEE--EECCBSSTT--C------CCBCCCEEEEEECC
T ss_pred CCCccceEEcCCCCceEEEEEEE-CCCCchHHeEEEEECCE--EEE--EEEEeccCC--C------CEEEEEEEEEEECC
Confidence 668999999999 9999999 99999999999999999 999 999874332 1 16789999999999
Q ss_pred CCcccCCeEEEeeeCCEEEEEEeCCCCCCCCCceEEEEecCc
Q 041271 208 ADVRLDDFKTEMEEDGVLTVTFTKPIKPKKTQQQLISKLLGF 249 (310)
Q Consensus 208 ~~vd~~~I~A~l~~dGvL~ItvPK~~~~~~~~~r~I~I~~~~ 249 (310)
.+||.+.|+|+|++||||+|++||. ++. .+.|.|+...
T Consensus 164 ~~Vd~e~i~A~~~~nGVL~I~lPK~-~~~---~~~I~it~~~ 201 (314)
T 2bol_A 164 PSVDRNHIQATITTDDVLVIEAPVN-EPN---YKAIKLSPEK 201 (314)
T ss_dssp TTBCGGGCEEEECSSSEEEEEEEBS-SCC---TTTEEEETTT
T ss_pred CCccccccEEEEeCCCEEEEEEecc-Ccc---cceeecccCC
Confidence 9999999999998899999999999 222 2457776544
No 21
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.70 E-value=9.5e-17 Score=124.83 Aligned_cols=84 Identities=18% Similarity=0.291 Sum_probs=67.0
Q ss_pred EEeCCEEEEEEEcCCCCCCceEEEEeCCEEEEEEEEEecc-cceeEEeecceEEeeeCCcccCcCCcceeee-eCCeEEE
Q 041271 30 EYDGDKIVCKASLPAVRMEDVKIDINDKELTLTRELNIAD-GGTILRRFLKVSRNFDLPDGVKRSNFKSTSM-EDGVLTV 107 (310)
Q Consensus 30 ~E~ed~y~v~vdLPGv~~edI~V~v~~~~L~I~g~~~~~~-~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~-~dGvL~I 107 (310)
.++++.|+|.++||||+++||+|.++++.|+|+|+++... ...+.+ +.|.|+|.||..|+ .+.++|.| +||+|+|
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~--~ef~R~~~LP~~vd-~~~i~A~~~~~GvL~I 78 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFIS--REFHRKYRIPADVD-PLTITSSMSSDGVLTV 78 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEE--EEEEEEEECCTTBC-GGGCEEEECTTSEEEE
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEE--EEEEEEEECCCCcC-hhHcEEEECCCCEEEE
Confidence 3689999999999999999999999999999999987542 222222 35999999999999 88899999 8999999
Q ss_pred Eeecccccc
Q 041271 108 TFTRDAAAT 116 (310)
Q Consensus 108 ~lPK~~~a~ 116 (310)
++|+...+.
T Consensus 79 ~~pK~~~~~ 87 (90)
T 2y1y_A 79 NGPRKQVSG 87 (90)
T ss_dssp EECBC----
T ss_pred EEEcCCCCC
Confidence 999986654
No 22
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.65 E-value=4.2e-16 Score=135.62 Aligned_cols=86 Identities=16% Similarity=0.276 Sum_probs=71.0
Q ss_pred eeeEEEeCCEEEEEEEcCCCCCCceEEEEeCCEEEEEEEEEecc-cceeEEeecceEEeeeCCcccCcCCcceeee-eCC
Q 041271 26 STRWEYDGDKIVCKASLPAVRMEDVKIDINDKELTLTRELNIAD-GGTILRRFLKVSRNFDLPDGVKRSNFKSTSM-EDG 103 (310)
Q Consensus 26 ~~dv~E~ed~y~v~vdLPGv~~edI~V~v~~~~L~I~g~~~~~~-~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~-~dG 103 (310)
.+||.|+++.|+|.++||||++|||+|.++++.|+|+|+++... .+++.+ .+|.|+|.||.+|| .+.++|.| +||
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~--reF~R~~~LP~~Vd-~~~i~A~~s~dG 141 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFIS--REFHRKYRIPADVD-PLTITSSLSSDG 141 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEE--EEEEEEEECTTTCC-TTTCEEEECTTS
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEE--EEEEEEEECCCCcC-hhHeEEEEcCCC
Confidence 37999999999999999999999999999999999999987542 233332 34999999999999 88999999 799
Q ss_pred eEEEEeecccc
Q 041271 104 VLTVTFTRDAA 114 (310)
Q Consensus 104 vL~I~lPK~~~ 114 (310)
+|+|++||...
T Consensus 142 vL~I~lPK~~~ 152 (175)
T 2klr_A 142 VLTVNGPRKQV 152 (175)
T ss_dssp CEEEEEECC--
T ss_pred EEEEEEECCCC
Confidence 99999999754
No 23
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.52 E-value=2.8e-07 Score=73.75 Aligned_cols=80 Identities=14% Similarity=0.231 Sum_probs=70.4
Q ss_pred ecceEEEeecCcEEEEEEecCCCCCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCcc
Q 041271 132 LNAVIYWETSLDKHVLKASLLPGMKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADVR 211 (310)
Q Consensus 132 ~~p~vdv~et~~~~~i~~~~lPG~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~vd 211 (310)
..++++|.++++.+.|++. +||+++++++|++.++. |.| ++... .+ ..|...+.|+..|+
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~-l~~v~~~~v~v~~~~~~--l~v--~~~~~-----~~----------~~y~~~~~L~~~I~ 67 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLM-IKNVQKNDVNVEFSEKE--LSA--LVKLP-----SG----------EDYNLKLELLHPII 67 (114)
T ss_dssp CCCCEEEEECSSEEEEEEC-CCSCCGGGEEEECSSSC--EEE--EEECT-----TS----------SEEEEEECBSSCCC
T ss_pred CCCCccEEeCCCEEEEEEE-eCCCCHHHCEEEEEcCE--EEE--EEEeC-----CC----------cEEEEEeeCCCcCC
Confidence 4577999999999999999 99999999999999999 999 65421 11 25778899999999
Q ss_pred cCCeEEEeeeCCEEEEEEeCC
Q 041271 212 LDDFKTEMEEDGVLTVTFTKP 232 (310)
Q Consensus 212 ~~~I~A~l~~dGvL~ItvPK~ 232 (310)
++..++.+. +|.|+|+++|.
T Consensus 68 ~e~s~~~~~-~~~l~i~L~K~ 87 (114)
T 1rl1_A 68 PEQSTFKVL-STKIEIKLKKP 87 (114)
T ss_dssp GGGEEEEEC-SSSEEEEEECS
T ss_pred ccccEEEEE-CCEEEEEEEcC
Confidence 999999999 99999999998
No 24
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.51 E-value=2.8e-07 Score=70.68 Aligned_cols=79 Identities=15% Similarity=0.180 Sum_probs=69.5
Q ss_pred cceEEEeecCcEEEEEEecCCCCCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCccc
Q 041271 133 NAVIYWETSLDKHVLKASLLPGMKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADVRL 212 (310)
Q Consensus 133 ~p~vdv~et~~~~~i~~~~lPG~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~vd~ 212 (310)
.++++|.++++.+.|++. +||+.++++.|++.++. |.| ++... .+ ..|...+.|+..|++
T Consensus 2 ~~~~~W~Qt~~~V~v~i~-~~~v~~~~v~v~~~~~~--l~v--~~~~~-----~~----------~~y~~~~~L~~~I~~ 61 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVF-AKGIPKQNVNIDFGEQI--LSV--VIEVP-----GE----------DAYYLQPRLFGKIIP 61 (92)
T ss_dssp CSEEEEEEETTEEEEEEE-CCSCCGGGEEEEECSSB--EEE--EECCT-----TS----------CCEEECCBBSSCBCG
T ss_pred CccccEEeCCCEEEEEEE-ECCCChHHeEEEEECCE--EEE--EEEcC-----CC----------cEEEEeeEcCCccCc
Confidence 478999999999999999 99999999999999999 999 65421 11 247778899999999
Q ss_pred CCeEEEeeeCCEEEEEEeCC
Q 041271 213 DDFKTEMEEDGVLTVTFTKP 232 (310)
Q Consensus 213 ~~I~A~l~~dGvL~ItvPK~ 232 (310)
+..++.+. +|.|.|+++|.
T Consensus 62 ~~s~~~~~-~~~l~i~L~K~ 80 (92)
T 2xcm_C 62 DKCKYEVL-STKIEICLAKA 80 (92)
T ss_dssp GGCEEEEC-SSCEEEEEEBS
T ss_pred hhEEEEEE-CCEEEEEEEcC
Confidence 99999999 99999999998
No 25
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.50 E-value=8.6e-07 Score=67.87 Aligned_cols=81 Identities=9% Similarity=0.080 Sum_probs=70.9
Q ss_pred CceeeEEEeCCEEEEEEEcCCCCCCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCcceeeeeCC
Q 041271 24 NISTRWEYDGDKIVCKASLPAVRMEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNFKSTSMEDG 103 (310)
Q Consensus 24 ~~~~dv~E~ed~y~v~vdLPGv~~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~~dG 103 (310)
.++++|+++++...|.+.+||+.++++.|.+.++.|.|++... + ...|...+.|+..++ ++...+.+.+|
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~--~-------~~~y~~~~~L~~~I~-~~~s~~~~~~~ 71 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVP--G-------EDAYYLQPRLFGKII-PDKCKYEVLST 71 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCT--T-------SCCEEECCBBSSCBC-GGGCEEEECSS
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcC--C-------CcEEEEeeEcCCccC-chhEEEEEECC
Confidence 4789999999999999999999999999999999999996431 0 135788899999999 88889999999
Q ss_pred eEEEEeecccc
Q 041271 104 VLTVTFTRDAA 114 (310)
Q Consensus 104 vL~I~lPK~~~ 114 (310)
.|.|.+.|...
T Consensus 72 ~l~i~L~K~~~ 82 (92)
T 2xcm_C 72 KIEICLAKADI 82 (92)
T ss_dssp CEEEEEEBSSS
T ss_pred EEEEEEEcCCC
Confidence 99999999754
No 26
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.43 E-value=5.2e-07 Score=72.15 Aligned_cols=82 Identities=16% Similarity=0.250 Sum_probs=71.7
Q ss_pred CCceeeEEEeCCEEEEEEEcCCCCCCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCcceeeeeC
Q 041271 23 SNISTRWEYDGDKIVCKASLPAVRMEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNFKSTSMED 102 (310)
Q Consensus 23 ~~~~~dv~E~ed~y~v~vdLPGv~~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~~d 102 (310)
..+++||+++++.+.|.+.+||+++++++|.+.++.|.|++... + ...|...+.|+..++ .+...+.+.+
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~--~-------~~~y~~~~~L~~~I~-~e~s~~~~~~ 77 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLP--S-------GEDYNLKLELLHPII-PEQSTFKVLS 77 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECT--T-------SSEEEEEECBSSCCC-GGGEEEEECS
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeC--C-------CcEEEEEeeCCCcCC-ccccEEEEEC
Confidence 45779999999999999999999999999999999999997531 0 125778899999999 8888999999
Q ss_pred CeEEEEeecccc
Q 041271 103 GVLTVTFTRDAA 114 (310)
Q Consensus 103 GvL~I~lPK~~~ 114 (310)
|.|.|.+.|...
T Consensus 78 ~~l~i~L~K~~~ 89 (114)
T 1rl1_A 78 TKIEIKLKKPEA 89 (114)
T ss_dssp SSEEEEEECSSC
T ss_pred CEEEEEEEcCCC
Confidence 999999999864
No 27
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.16 E-value=2.8e-06 Score=81.76 Aligned_cols=74 Identities=16% Similarity=0.228 Sum_probs=65.5
Q ss_pred CCceeeEEEeCCEEEEEEEcCCCCCCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCcceeeeeC
Q 041271 23 SNISTRWEYDGDKIVCKASLPAVRMEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNFKSTSMED 102 (310)
Q Consensus 23 ~~~~~dv~E~ed~y~v~vdLPGv~~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~~d 102 (310)
...++.|... .|.+++.|||+++++|++.-.+++|+|+ .|.|+|.+.||..+.......|.|+|
T Consensus 296 ~~~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gdeL~v~--------------~g~~rR~i~LP~~L~~~~v~~A~~~~ 359 (374)
T 3igf_A 296 APKPITIDTH--NRQVRLFLPGFDKKQVKLTQYGPEVTVE--------------AGDQRRNIFLPPALSGRPITGAKFQN 359 (374)
T ss_dssp SCCSEEEETT--TTEEEEECTTCCGGGCEEEEETTEEEEE--------------ETTEEEEEECCTTTTTCCEEEEEEET
T ss_pred CCCCEEEEec--cEEEEEECCCCCHHHeEEEEECCeEEEE--------------ECCEeecccCCHHHcCCCccccEEEC
Confidence 3455665443 8999999999999999999999999999 89999999999999977899999999
Q ss_pred CeEEEEeecc
Q 041271 103 GVLTVTFTRD 112 (310)
Q Consensus 103 GvL~I~lPK~ 112 (310)
|.|.|++-..
T Consensus 360 ~~L~i~~~~~ 369 (374)
T 3igf_A 360 NYLIISFLEH 369 (374)
T ss_dssp TEEEEEECCC
T ss_pred CEEEEEEehh
Confidence 9999998643
No 28
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.77 E-value=8.8e-05 Score=61.22 Aligned_cols=81 Identities=11% Similarity=0.132 Sum_probs=70.8
Q ss_pred CCceeeEEEeCCEEEEEEEcCCCC--CCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCcceeee
Q 041271 23 SNISTRWEYDGDKIVCKASLPAVR--MEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNFKSTSM 100 (310)
Q Consensus 23 ~~~~~dv~E~ed~y~v~vdLPGv~--~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~ 100 (310)
-+|.+.+..+++..+|.+.+|..+ ..++++.+++..+..+ .-.|.-++.||..|-..+..+|.|
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~--------------~~PYyLRL~LP~~V~e~~~~kA~Y 67 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFH--------------LSPYYLRLRFPHELIDDERSTAQY 67 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEEC--------------SSSSCEEECCSSCEECCSSCEEEE
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEe--------------cCCeEEEecCCCeeecCCCcceeE
Confidence 468899999999999999999999 8999999999999998 445678899999993277788888
Q ss_pred e--CCeEEEEeeccccccc
Q 041271 101 E--DGVLTVTFTRDAAATA 117 (310)
Q Consensus 101 ~--dGvL~I~lPK~~~a~a 117 (310)
+ .|.|+|++||......
T Consensus 68 D~d~~~~~VtLpK~~~Ge~ 86 (134)
T 2k8q_A 68 DSKDECINVKVAKLNKNEY 86 (134)
T ss_dssp ETTTTEEEEEEEESSTTCC
T ss_pred eccCCEEEEEEeCCCCCCC
Confidence 6 8999999999877653
No 29
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.71 E-value=0.00051 Score=55.04 Aligned_cols=82 Identities=11% Similarity=0.124 Sum_probs=71.1
Q ss_pred CCCceeeEEEeCCEEEEEEEcCCCC--CCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCcceee
Q 041271 22 SSNISTRWEYDGDKIVCKASLPAVR--MEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNFKSTS 99 (310)
Q Consensus 22 ~~~~~~dv~E~ed~y~v~vdLPGv~--~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~ 99 (310)
+-+|.+.+..+++..+|.+.+|-++ ..++++.++++.+... .-.|.-++.||..+-.++..+|.
T Consensus 15 ~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~--------------~~PYyLRL~lP~~vved~~~~A~ 80 (115)
T 3eud_A 15 MITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFH--------------LSPYYLRLRFPHELIDDERSTAQ 80 (115)
T ss_dssp CBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEE--------------ETTEEEEEECSSCEECSTTCEEE
T ss_pred EeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEe--------------cCCeEEEEecCcceecCCCcceE
Confidence 4578999999999999999999977 8899999999999999 45568889999998546777888
Q ss_pred ee--CCeEEEEeeccccccc
Q 041271 100 ME--DGVLTVTFTRDAAATA 117 (310)
Q Consensus 100 ~~--dGvL~I~lPK~~~a~a 117 (310)
|+ +|.++|++||......
T Consensus 81 YD~d~g~~~v~lpK~~~GE~ 100 (115)
T 3eud_A 81 YDSKDECINVKVAKLNKNEY 100 (115)
T ss_dssp EETTTTEEEEEEEESSTTCC
T ss_pred EeCCCcEEEEEEcCCcCCCc
Confidence 86 9999999999877654
No 30
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.59 E-value=0.0001 Score=60.83 Aligned_cols=76 Identities=12% Similarity=0.192 Sum_probs=66.6
Q ss_pred ecceEEEeecCcEEEEEEecCCCCC--CCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCC
Q 041271 132 LNAVIYWETSLDKHVLKASLLPGMK--KEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPAD 209 (310)
Q Consensus 132 ~~p~vdv~et~~~~~i~~~~lPG~~--~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~ 209 (310)
.+|...+..+++.++|.+. +|..+ ..++++.+++.. +.. . ...|+-++.||..
T Consensus 2 iTP~F~itQd~e~viV~Ik-~P~~~~~~sdiei~v~~~~--F~F--~--------------------~~PYyLRL~LP~~ 56 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIF-ISNIRFSAVGLEIIIQENM--IIF--H--------------------LSPYYLRLRFPHE 56 (134)
T ss_dssp CCSEEEEEECSSEEEEEEE-CCSSCCCSSSCCCEECSSS--EEE--C--------------------SSSSCEEECCSSC
T ss_pred cCceEEEEECCCEEEEEEE-cCccccCccccEEEEeCCE--EEE--e--------------------cCCeEEEecCCCe
Confidence 5789999999999999999 99999 899999999998 777 2 2246667999999
Q ss_pred c-ccCCeEEEeee-CCEEEEEEeCC
Q 041271 210 V-RLDDFKTEMEE-DGVLTVTFTKP 232 (310)
Q Consensus 210 v-d~~~I~A~l~~-dGvL~ItvPK~ 232 (310)
| |.+.-+|+|+. .|.|+|++||.
T Consensus 57 V~e~~~~kA~YD~d~~~~~VtLpK~ 81 (134)
T 2k8q_A 57 LIDDERSTAQYDSKDECINVKVAKL 81 (134)
T ss_dssp EECCSSCEEEEETTTTEEEEEEEES
T ss_pred eecCCCcceeEeccCCEEEEEEeCC
Confidence 9 98999999963 79999999997
No 31
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.56 E-value=0.00085 Score=53.73 Aligned_cols=80 Identities=11% Similarity=0.164 Sum_probs=67.4
Q ss_pred eeeeecceEEEeecCcEEEEEEecCCCCC--CCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEE
Q 041271 128 VIAFLNAVIYWETSLDKHVLKASLLPGMK--KEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFK 205 (310)
Q Consensus 128 ~~~~~~p~vdv~et~~~~~i~~~~lPG~~--~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~ 205 (310)
...+.+|...+..+++.++|.+. +|-++ ..++++.++++. +.. . ...++-++.
T Consensus 12 ~~~~iTP~F~itQDdefv~I~I~-~p~ir~~a~~~ei~vd~~~--F~F--~--------------------~~PYyLRL~ 66 (115)
T 3eud_A 12 DDKMITPRFSITQDEEFIFLKIF-ISNIRFSAVGLEIIIQENM--IIF--H--------------------LSPYYLRLR 66 (115)
T ss_dssp --CCBCCCEEEEECSSEEEEEEE-CCSCCCCSSSCEEEEETTE--EEE--E--------------------ETTEEEEEE
T ss_pred CCCEeCCcEEEEECCCEEEEEEE-cCceecccCccEEEEeCCE--EEE--e--------------------cCCeEEEEe
Confidence 34578899999999999999999 99877 889999999998 777 2 225777899
Q ss_pred CCCCc-ccCCeEEEee-eCCEEEEEEeCC
Q 041271 206 LPADV-RLDDFKTEME-EDGVLTVTFTKP 232 (310)
Q Consensus 206 LP~~v-d~~~I~A~l~-~dGvL~ItvPK~ 232 (310)
||..+ |-+.-+|+|+ .+|.++|++||.
T Consensus 67 lP~~vved~~~~A~YD~d~g~~~v~lpK~ 95 (115)
T 3eud_A 67 FPHELIDDERSTAQYDSKDECINVKVAKL 95 (115)
T ss_dssp CSSCEECSTTCEEEEETTTTEEEEEEEES
T ss_pred cCcceecCCCcceEEeCCCcEEEEEEcCC
Confidence 99998 7788899995 389999999998
No 32
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=96.96 E-value=0.002 Score=61.76 Aligned_cols=71 Identities=20% Similarity=0.284 Sum_probs=59.1
Q ss_pred ceEEEeecCcEEEEEEecCCCCCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCcccC
Q 041271 134 AVIYWETSLDKHVLKASLLPGMKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADVRLD 213 (310)
Q Consensus 134 p~vdv~et~~~~~i~~~~lPG~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~vd~~ 213 (310)
.++.+... .|.+++. |||+++++|++.-.++. |+| . .|.|+|.+.||.....-
T Consensus 298 ~~~~i~~~--~~~~~l~-lP~~~~~~~~l~~~gde--L~v--~--------------------~g~~rR~i~LP~~L~~~ 350 (374)
T 3igf_A 298 KPITIDTH--NRQVRLF-LPGFDKKQVKLTQYGPE--VTV--E--------------------AGDQRRNIFLPPALSGR 350 (374)
T ss_dssp CSEEEETT--TTEEEEE-CTTCCGGGCEEEEETTE--EEE--E--------------------ETTEEEEEECCTTTTTC
T ss_pred CCEEEEec--cEEEEEE-CCCCCHHHeEEEEECCe--EEE--E--------------------ECCEeecccCCHHHcCC
Confidence 45555444 7999999 99999999999999999 999 2 57899999999887544
Q ss_pred -CeEEEeeeCCEEEEEEeCC
Q 041271 214 -DFKTEMEEDGVLTVTFTKP 232 (310)
Q Consensus 214 -~I~A~l~~dGvL~ItvPK~ 232 (310)
-..|+|+ ||.|+|++-..
T Consensus 351 ~v~~A~~~-~~~L~i~~~~~ 369 (374)
T 3igf_A 351 PITGAKFQ-NNYLIISFLEH 369 (374)
T ss_dssp CEEEEEEE-TTEEEEEECCC
T ss_pred CccccEEE-CCEEEEEEehh
Confidence 4679999 99999998654
No 33
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=96.74 E-value=0.0089 Score=49.18 Aligned_cols=91 Identities=5% Similarity=0.048 Sum_probs=68.3
Q ss_pred CCceeeEEEe-CCEEEEEEEcCCCCCCceEEEEeCCEEEEEEEEEecccceeEEeec---ceEEeeeCCcccCcCCccee
Q 041271 23 SNISTRWEYD-GDKIVCKASLPAVRMEDVKIDINDKELTLTRELNIADGGTILRRFL---KVSRNFDLPDGVKRSNFKST 98 (310)
Q Consensus 23 ~~~~~dv~E~-ed~y~v~vdLPGv~~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g---~f~R~~~LP~~vd~~~~~~A 98 (310)
..++.||+++ .+..+|.|.++++.++++.|.+..+.|.|.........-+.--..| .|.-.+.|-..++ ++....
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~-pe~S~~ 96 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIE-PEQCTF 96 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEE-EEEEEE
T ss_pred cCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccccCC-chhCEE
Confidence 4678999999 9999999999999999999999999999985431110000000001 4666678888888 777778
Q ss_pred eeeCCeEEEEeecccc
Q 041271 99 SMEDGVLTVTFTRDAA 114 (310)
Q Consensus 99 ~~~dGvL~I~lPK~~~ 114 (310)
.+.+.-+.|.+.|...
T Consensus 97 ~v~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 97 CFTASRIDICLRKRQS 112 (134)
T ss_dssp EECSSEEEEEEEESSS
T ss_pred EEeCCEEEEEEEECCC
Confidence 8888999999998753
No 34
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.71 E-value=0.015 Score=47.06 Aligned_cols=80 Identities=11% Similarity=0.173 Sum_probs=66.0
Q ss_pred ecceEEEeecCcEEEEEEecCCCC---CCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEE-CC
Q 041271 132 LNAVIYWETSLDKHVLKASLLPGM---KKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFK-LP 207 (310)
Q Consensus 132 ~~p~vdv~et~~~~~i~~~~lPG~---~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~-LP 207 (310)
..++++|.++.+.+.|.+. +||+ .++++.|++..+. |.| .... ..+. .|.-.+. |-
T Consensus 19 ~~~~y~W~Qt~~~V~i~I~-l~~~~~~~~~~v~V~~~~~~--l~v--~~~~-----~~~~----------~y~~~~~~L~ 78 (127)
T 1x5m_A 19 KISNYGWDQSDKFVKIYIT-LTGVHQVPTENVQVHFTERS--FDL--LVKN-----LNGK----------SYSMIVNNLL 78 (127)
T ss_dssp ECCSCEEEEETTEEEEEEE-CTTTTTSCTTSEEEEECSSE--EEE--EECS-----CSSS----------CEEEEEECBS
T ss_pred CccEEEEEcCCCEEEEEEE-eCCCCcCCccccEEEEEcCE--EEE--EEEc-----CCCC----------cEEEEhHHhc
Confidence 3468999999999999999 9999 8999999999999 888 4421 0111 3455675 88
Q ss_pred CCcccCCeEEEeeeCCEEEEEEeCC
Q 041271 208 ADVRLDDFKTEMEEDGVLTVTFTKP 232 (310)
Q Consensus 208 ~~vd~~~I~A~l~~dGvL~ItvPK~ 232 (310)
..|+++.-+..+. .+.+.|++-|.
T Consensus 79 ~~I~~e~S~~~v~-~~kVei~L~K~ 102 (127)
T 1x5m_A 79 KPISVEGSSKKVK-TDTVLILCRKK 102 (127)
T ss_dssp SCCCTTTCEEEEE-TTEEEEEEECS
T ss_pred CccCcccCEEEEe-CCEEEEEEEEC
Confidence 9999999899999 99999999998
No 35
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.60 E-value=0.027 Score=45.51 Aligned_cols=81 Identities=12% Similarity=0.188 Sum_probs=66.2
Q ss_pred CceeeEEEeCCEEEEEEEcCCC---CCCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeee-CCcccCcCCcceee
Q 041271 24 NISTRWEYDGDKIVCKASLPAV---RMEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFD-LPDGVKRSNFKSTS 99 (310)
Q Consensus 24 ~~~~dv~E~ed~y~v~vdLPGv---~~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~-LP~~vd~~~~~~A~ 99 (310)
.++.+|..+++...|.|.+||+ +++++.|.+..+.|.|..... .+ ..|.-.+. |-..++ .+.....
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~--~~-------~~y~~~~~~L~~~I~-~e~S~~~ 89 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNL--NG-------KSYSMIVNNLLKPIS-VEGSSKK 89 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSC--SS-------SCEEEEEECBSSCCC-TTTCEEE
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcC--CC-------CcEEEEhHHhcCccC-cccCEEE
Confidence 4589999999999999999999 899999999999999985211 00 14566774 889999 7777788
Q ss_pred eeCCeEEEEeecccc
Q 041271 100 MEDGVLTVTFTRDAA 114 (310)
Q Consensus 100 ~~dGvL~I~lPK~~~ 114 (310)
...+.+.|.+-|...
T Consensus 90 v~~~kVei~L~K~~~ 104 (127)
T 1x5m_A 90 VKTDTVLILCRKKVE 104 (127)
T ss_dssp EETTEEEEEEECSSS
T ss_pred EeCCEEEEEEEECCC
Confidence 888999999998764
No 36
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=96.58 E-value=0.012 Score=48.30 Aligned_cols=87 Identities=8% Similarity=0.101 Sum_probs=67.9
Q ss_pred ecceEEEeec-CcEEEEEEecCCCCCCCCeEEEEECCeeeEEEEEEEEeeecc-----cCCCccEEEEeeecceEEEEEE
Q 041271 132 LNAVIYWETS-LDKHVLKASLLPGMKKEDVKIEIEDDGAELKMIVLLETEEEE-----GDTIPEWLLEEFTDGKIIRRFK 205 (310)
Q Consensus 132 ~~p~vdv~et-~~~~~i~~~~lPG~~~edI~V~v~~~~~~L~I~~~g~~~~~~-----~~~~~~~~~~E~~~g~F~R~~~ 205 (310)
..++++|+++ .+.+.|++. ++++.++++.|++.++. |.| ........ ...... -.|.-.+.
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~-~k~v~~~~v~V~f~~~~--l~v--~~~~~~~~~l~~~~a~g~~--------~~y~~~~~ 84 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVY-VKEICRDTSRVLFREQD--FTL--IFQTRDGNFLRLHPGCGPH--------TTFRWQVK 84 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEE-CCSBCTTSCEEEECSSE--EEE--EECBCCHHHHHHSTTCCTT--------SCEEEEEE
T ss_pred cCCCeEEEcCCCCEEEEEEE-eCCCCcccCEEEEECCE--EEE--EEEcCCCcccccccccCcc--------eeEEEecc
Confidence 4588999999 999999999 99999999999999999 888 44321100 000000 04666678
Q ss_pred CCCCcccCCeEEEeeeCCEEEEEEeCC
Q 041271 206 LPADVRLDDFKTEMEEDGVLTVTFTKP 232 (310)
Q Consensus 206 LP~~vd~~~I~A~l~~dGvL~ItvPK~ 232 (310)
|-..|+++.-+..+. ++-+.|++.|.
T Consensus 85 L~~~I~pe~S~~~v~-~~kIeI~L~K~ 110 (134)
T 1wh0_A 85 LRNLIEPEQCTFCFT-ASRIDICLRKR 110 (134)
T ss_dssp BSSCEEEEEEEEEEC-SSEEEEEEEES
T ss_pred ccccCCchhCEEEEe-CCEEEEEEEEC
Confidence 999999999888899 89999999998
No 37
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=96.48 E-value=0.032 Score=44.87 Aligned_cols=80 Identities=15% Similarity=0.277 Sum_probs=63.0
Q ss_pred CceeeEEEeCCEEEEEEEcC-CC-CCCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCcceeeee
Q 041271 24 NISTRWEYDGDKIVCKASLP-AV-RMEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNFKSTSME 101 (310)
Q Consensus 24 ~~~~dv~E~ed~y~v~vdLP-Gv-~~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~~ 101 (310)
.+...|..+.+...|++.|| |+ +++||.|.+..+.|.|..+.. .+. .+.-...|...|+ .+...-..+
T Consensus 19 ~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~--~~~-------~~~~~~~L~~~I~-~e~S~w~i~ 88 (124)
T 1wgv_A 19 RENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEE--NGE-------RVLMEGKLTHKIN-TESSLWSLE 88 (124)
T ss_dssp CSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECS--SSE-------EEEEEEEBSSCBC-TTTCEEEEC
T ss_pred CCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEcc--CCC-------ceEEcccccCcCC-CcCCEEEEe
Confidence 56899999999999999999 88 899999999999999985320 010 1123467888888 777777788
Q ss_pred CCe-EEEEeeccc
Q 041271 102 DGV-LTVTFTRDA 113 (310)
Q Consensus 102 dGv-L~I~lPK~~ 113 (310)
++- |.|.+.|..
T Consensus 89 ~~k~v~i~L~K~~ 101 (124)
T 1wgv_A 89 PGKCVLVNLSKVG 101 (124)
T ss_dssp TTSEEEEEECBSS
T ss_pred CCCEEEEEEEECC
Confidence 875 999999875
No 38
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=96.46 E-value=0.014 Score=47.57 Aligned_cols=75 Identities=15% Similarity=0.189 Sum_probs=60.4
Q ss_pred cceEEEeecCcEEEEEEecCC-CCCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCcc
Q 041271 133 NAVIYWETSLDKHVLKASLLP-GMKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADVR 211 (310)
Q Consensus 133 ~p~vdv~et~~~~~i~~~~lP-G~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~vd 211 (310)
.|.+.|..+.+.+.|++. || |++++|+.|.+..+. |.| ... +. . .-...|...|+
T Consensus 4 ~~~y~W~Qt~~~V~i~I~-lp~~~~~kdv~V~i~~~~--l~v--~~~--------g~----------~-~~~~~L~~~I~ 59 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFP-VTGDADSSAIKIRMVGKK--ICV--KNQ--------GE----------I-VIDGELLHEVD 59 (131)
T ss_dssp -CCCEEEEETTEEEEEEE-CC---CCSCEEEEEETTE--EEE--EET--------TE----------E-EEEEEBSSCEE
T ss_pred CCcEEEEecCCEEEEEEE-CCCCCCccceEEEEECCE--EEE--EEC--------CE----------e-eEccccccccc
Confidence 478899999999999999 96 999999999999999 998 431 00 1 12356888999
Q ss_pred cCCeEEEeeeCCEEEEEEeCC
Q 041271 212 LDDFKTEMEEDGVLTVTFTKP 232 (310)
Q Consensus 212 ~~~I~A~l~~dGvL~ItvPK~ 232 (310)
++.-+-.+. +|-|.|++-|.
T Consensus 60 ~e~S~w~i~-~~kv~i~L~K~ 79 (131)
T 2o30_A 60 VSSLWWVIN-GDVVDVNVTKK 79 (131)
T ss_dssp EEEEEEEEE-TTEEEEEEEES
T ss_pred cccCEEEEe-CCEEEEEEEEC
Confidence 999888999 89999999998
No 39
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=96.38 E-value=0.026 Score=47.52 Aligned_cols=87 Identities=15% Similarity=0.269 Sum_probs=67.8
Q ss_pred ccCcccccCCCceeeEEEeCCEEEEEEEcC-CCCCCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCc
Q 041271 14 TESSKFIDSSNISTRWEYDGDKIVCKASLP-AVRMEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKR 92 (310)
Q Consensus 14 ~~~~~~~~~~~~~~dv~E~ed~y~v~vdLP-Gv~~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~ 92 (310)
.+.+..+....+...|..+.+...|+|.|| |++..||.|.+..+.|.|..+ + . . .-...|...|+
T Consensus 3 ~~r~~~~~~~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k-----g-~---~----~l~g~L~~~I~- 68 (157)
T 2rh0_A 3 EERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG-----G-R---E----ILKGKLFDSTI- 68 (157)
T ss_dssp GGGTTCCCEECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEET-----T-E---E----EEEEEBSSCBC-
T ss_pred hhccCcccCCCCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEEC-----C-E---E----EEeeccccccC-
Confidence 344555555678899999999999999998 899999999999999999852 1 1 1 12456888888
Q ss_pred CCcceeeeeCCe-EEEEeecccc
Q 041271 93 SNFKSTSMEDGV-LTVTFTRDAA 114 (310)
Q Consensus 93 ~~~~~A~~~dGv-L~I~lPK~~~ 114 (310)
.+...-..+++- |.|.+-|...
T Consensus 69 ~eeS~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 69 ADEGTWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp GGGCEEEEECCCEEEEEEEBSSC
T ss_pred ccccEEEEcCCcEEEEEEEEcCC
Confidence 667777778775 8999998754
No 40
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=96.27 E-value=0.013 Score=47.08 Aligned_cols=78 Identities=22% Similarity=0.279 Sum_probs=62.9
Q ss_pred eecceEEEeecCcEEEEEEecCC-C--CCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECC
Q 041271 131 FLNAVIYWETSLDKHVLKASLLP-G--MKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLP 207 (310)
Q Consensus 131 ~~~p~vdv~et~~~~~i~~~~lP-G--~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP 207 (310)
...|.+.|..+.+.+.|++. || | ++.+|+.|.+..+. |.| .... .. +.-...|.
T Consensus 14 ~~~~~y~W~Qt~~eV~v~V~-lp~~~~~~~kdv~V~i~~~~--l~v--~~kg--------~~----------~~~~g~L~ 70 (121)
T 3qor_A 14 ADLPNYRWTQTLSELDLAVP-FCVNFRLKGKDMVVDIQRRH--LRV--GLKG--------QP----------AIIDGELY 70 (121)
T ss_dssp CBCSSCEEEECSSEEEEEEE-CCCSSCCCGGGEEEEEETTE--EEE--EETT--------SC----------CSEEEEBS
T ss_pred CcCCCEEEEEccceEEEEEE-CCCCCcccccceEEEEEcCE--EEE--EEcC--------cc----------eEEecccc
Confidence 34578999999999999999 98 5 78999999999999 888 3221 00 11134688
Q ss_pred CCcccCCeEEEeeeCC-EEEEEEeCC
Q 041271 208 ADVRLDDFKTEMEEDG-VLTVTFTKP 232 (310)
Q Consensus 208 ~~vd~~~I~A~l~~dG-vL~ItvPK~ 232 (310)
..|+++.-.-.+. +| .|.|++-|.
T Consensus 71 ~~I~~deS~w~i~-~~~~i~i~L~K~ 95 (121)
T 3qor_A 71 NEVKVEESSWLIA-DGAVVTVHLEKI 95 (121)
T ss_dssp SCBCGGGCEEEEE-TTTEEEEEEEBS
T ss_pred ccccccccEEEEc-CCCEEEEEEEEC
Confidence 8999999899999 88 999999998
No 41
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=96.21 E-value=0.033 Score=44.81 Aligned_cols=80 Identities=13% Similarity=0.288 Sum_probs=64.4
Q ss_pred ecceEEEeecCcEEEEEEecCC-CC-CCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCC
Q 041271 132 LNAVIYWETSLDKHVLKASLLP-GM-KKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPAD 209 (310)
Q Consensus 132 ~~p~vdv~et~~~~~i~~~~lP-G~-~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~ 209 (310)
..|.+.|..+.+.+.|++. || |+ +++|+.|.+..+. |.| .... ..+. .+.-...|...
T Consensus 18 ~~~~y~W~Qt~~~V~i~I~-lp~~~~~~kdv~V~i~~~~--l~v--~~~~-----~~~~----------~~~~~~~L~~~ 77 (124)
T 1wgv_A 18 VRENYTWSQDYTDLEVRVP-VPKHVVKGKQVSVALSSSS--IRV--AMLE-----ENGE----------RVLMEGKLTHK 77 (124)
T ss_dssp CCSSCEEEEETTEEEEEEE-CCTTCCSGGGEEEEECSSE--EEE--EEEC-----SSSE----------EEEEEEEBSSC
T ss_pred cCCcEEEEEcccEEEEEEE-cCCCCCchhheEEEEEcCE--EEE--EEEc-----cCCC----------ceEEcccccCc
Confidence 4578999999999999999 98 88 8999999999999 988 4331 0111 12234678999
Q ss_pred cccCCeEEEeeeCCE-EEEEEeCC
Q 041271 210 VRLDDFKTEMEEDGV-LTVTFTKP 232 (310)
Q Consensus 210 vd~~~I~A~l~~dGv-L~ItvPK~ 232 (310)
|+++.-+-.+. +|- |.|++-|.
T Consensus 78 I~~e~S~w~i~-~~k~v~i~L~K~ 100 (124)
T 1wgv_A 78 INTESSLWSLE-PGKCVLVNLSKV 100 (124)
T ss_dssp BCTTTCEEEEC-TTSEEEEEECBS
T ss_pred CCCcCCEEEEe-CCCEEEEEEEEC
Confidence 99999999998 875 99999998
No 42
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=96.06 E-value=0.046 Score=44.39 Aligned_cols=76 Identities=16% Similarity=0.240 Sum_probs=59.1
Q ss_pred CCceeeEEEeCCEEEEEEEcC-CCCCCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCcceeeee
Q 041271 23 SNISTRWEYDGDKIVCKASLP-AVRMEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNFKSTSME 101 (310)
Q Consensus 23 ~~~~~dv~E~ed~y~v~vdLP-Gv~~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~~ 101 (310)
..+.+.|..+.+...|.|.|| |++++++.|.+..+.|.|..+ +. . .-...|...|+ .+...-...
T Consensus 3 ~~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~-----g~--~------~~~~~L~~~I~-~e~S~w~i~ 68 (131)
T 2o30_A 3 SEAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ-----GE--I------VIDGELLHEVD-VSSLWWVIN 68 (131)
T ss_dssp --CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEET-----TE--E------EEEEEBSSCEE-EEEEEEEEE
T ss_pred CCCcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC-----CE--e------eEccccccccc-cccCEEEEe
Confidence 457799999999999999996 899999999999999999852 11 1 12456778888 667777888
Q ss_pred CCeEEEEeecc
Q 041271 102 DGVLTVTFTRD 112 (310)
Q Consensus 102 dGvL~I~lPK~ 112 (310)
++-|.|.+-|.
T Consensus 69 ~~kv~i~L~K~ 79 (131)
T 2o30_A 69 GDVVDVNVTKK 79 (131)
T ss_dssp TTEEEEEEEES
T ss_pred CCEEEEEEEEC
Confidence 88899999987
No 43
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=95.99 E-value=0.043 Score=44.49 Aligned_cols=78 Identities=23% Similarity=0.293 Sum_probs=62.0
Q ss_pred CceeeEEEeCCEEEEEEEcC-C--CCCCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCcceeee
Q 041271 24 NISTRWEYDGDKIVCKASLP-A--VRMEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNFKSTSM 100 (310)
Q Consensus 24 ~~~~dv~E~ed~y~v~vdLP-G--v~~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~ 100 (310)
.+...|..+.+...|.+.|| | ++++|+.|.+..+.|.|..+ +. .+.-...|...|+ .+...-..
T Consensus 7 ~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k-----g~-------~~~~~~~L~~~I~-~e~s~w~i 73 (131)
T 1wfi_A 7 GPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK-----GQ-------PPVVDGELYNEVK-VEESSWLI 73 (131)
T ss_dssp CCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET-----TS-------CCSBCSCBSSCBC-STTCEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEEC-----Cc-------eEEEecccccccc-cccCEEEE
Confidence 46789999999999999999 6 89999999999999999852 10 0122445778888 66777778
Q ss_pred eCC-eEEEEeecccc
Q 041271 101 EDG-VLTVTFTRDAA 114 (310)
Q Consensus 101 ~dG-vL~I~lPK~~~ 114 (310)
++| .|.|.+.|...
T Consensus 74 ~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 74 EDGKVVTVHLEKINK 88 (131)
T ss_dssp ETTTEEEEEEEBSSS
T ss_pred cCCCEEEEEEEECCC
Confidence 888 89999998754
No 44
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=95.90 E-value=0.046 Score=44.31 Aligned_cols=77 Identities=23% Similarity=0.324 Sum_probs=62.3
Q ss_pred ecceEEEeecCcEEEEEEecCC-C--CCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCC
Q 041271 132 LNAVIYWETSLDKHVLKASLLP-G--MKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPA 208 (310)
Q Consensus 132 ~~p~vdv~et~~~~~i~~~~lP-G--~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~ 208 (310)
..|.+.|..+.+.+.|++. || | ++++|+.|.+..+. |.| .... ..+ .-...|..
T Consensus 6 ~~~~y~W~Qt~~~V~i~I~-lp~~~~~~~kdv~V~i~~~~--l~v--~~kg--------~~~----------~~~~~L~~ 62 (131)
T 1wfi_A 6 SGPNYRWTQTLAELDLAVP-FRVSFRLKGKDVVVDIQRRH--LRV--GLKG--------QPP----------VVDGELYN 62 (131)
T ss_dssp SCCSSEEEECSSEEEEEEC-CCCSSCCCTTSEEEEEETTE--EEE--EETT--------SCC----------SBCSCBSS
T ss_pred CCCcEEEEecCCEEEEEEE-CCCCCcccccceEEEEeCCE--EEE--EECC--------ceE----------EEeccccc
Confidence 4578899999999999999 99 6 89999999999999 998 4320 001 01235778
Q ss_pred CcccCCeEEEeeeCC-EEEEEEeCC
Q 041271 209 DVRLDDFKTEMEEDG-VLTVTFTKP 232 (310)
Q Consensus 209 ~vd~~~I~A~l~~dG-vL~ItvPK~ 232 (310)
.|+++.-+-.+. +| .|.|++-|.
T Consensus 63 ~I~~e~s~w~i~-~~k~v~i~L~K~ 86 (131)
T 1wfi_A 63 EVKVEESSWLIE-DGKVVTVHLEKI 86 (131)
T ss_dssp CBCSTTCEEEEE-TTTEEEEEEEBS
T ss_pred ccccccCEEEEc-CCCEEEEEEEEC
Confidence 899999899999 88 899999998
No 45
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=95.80 E-value=0.044 Score=44.14 Aligned_cols=76 Identities=16% Similarity=0.150 Sum_probs=63.2
Q ss_pred eEEEeecCcEEEEEEecCCCCCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCcccCC
Q 041271 135 VIYWETSLDKHVLKASLLPGMKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADVRLDD 214 (310)
Q Consensus 135 ~vdv~et~~~~~i~~~~lPG~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~vd~~~ 214 (310)
.+++..+.+.+.|++. +|+. +++.|.++.+. |.+ ++... ..+. .|.-.+.|-..|+++.
T Consensus 5 ~~~W~Qt~~~V~ltI~-~~~~--~~~~V~~~~~~--l~~--~~~~~----~~~~----------~y~~~l~L~~~I~~e~ 63 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFC-VEDS--KDVNVNFEKSK--LTF--SCLGG----SDNF----------KHLNEIDLFHCIDPND 63 (125)
T ss_dssp CEEEEECSSEEEEEEC-CTTE--EEEEEEEETTE--EEE--EEEET----TTTE----------EEEEEEEBSSCEEEEE
T ss_pred ceeEEeCCCEEEEEEE-ecCC--CceEEEEECCE--EEE--EEEeC----CCCc----------eEEEEEEccceecccc
Confidence 7999999999999999 9995 79999999999 999 65421 1111 3566778999999999
Q ss_pred eEEEeeeCCEEEEEEeCC
Q 041271 215 FKTEMEEDGVLTVTFTKP 232 (310)
Q Consensus 215 I~A~l~~dGvL~ItvPK~ 232 (310)
-+..+. ++-+.|++.|.
T Consensus 64 S~~~v~-~~kiei~L~K~ 80 (125)
T 1ejf_A 64 SKHKRT-DRSILCCLRKG 80 (125)
T ss_dssp EEEEEC-SSCEEEEEEES
T ss_pred CEEEEC-CCEEEEEEEEC
Confidence 999998 88899999998
No 46
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=95.72 E-value=0.084 Score=42.27 Aligned_cols=78 Identities=19% Similarity=0.202 Sum_probs=61.5
Q ss_pred CceeeEEEeCCEEEEEEEcCC---CCCCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCcceeee
Q 041271 24 NISTRWEYDGDKIVCKASLPA---VRMEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNFKSTSM 100 (310)
Q Consensus 24 ~~~~dv~E~ed~y~v~vdLPG---v~~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~ 100 (310)
.+...|..+.+...|+|.||. ++..||.|.+..+.|.|..+- . .+.-...|...|+ .+...-..
T Consensus 16 ~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg-----~-------~~~~~g~L~~~I~-~deS~w~i 82 (121)
T 3qor_A 16 LPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKG-----Q-------PAIIDGELYNEVK-VEESSWLI 82 (121)
T ss_dssp CSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETT-----S-------CCSEEEEBSSCBC-GGGCEEEE
T ss_pred CCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcC-----c-------ceEEecccccccc-ccccEEEE
Confidence 467899999999999999994 789999999999999987321 0 1223456888888 66677778
Q ss_pred eCC-eEEEEeecccc
Q 041271 101 EDG-VLTVTFTRDAA 114 (310)
Q Consensus 101 ~dG-vL~I~lPK~~~ 114 (310)
++| .|.|.+.|...
T Consensus 83 ~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 83 ADGAVVTVHLEKINK 97 (121)
T ss_dssp ETTTEEEEEEEBSSS
T ss_pred cCCCEEEEEEEECCC
Confidence 887 99999988653
No 47
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=95.64 E-value=0.071 Score=44.78 Aligned_cols=76 Identities=17% Similarity=0.264 Sum_probs=63.1
Q ss_pred ecceEEEeecCcEEEEEEecCC-CCCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCc
Q 041271 132 LNAVIYWETSLDKHVLKASLLP-GMKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADV 210 (310)
Q Consensus 132 ~~p~vdv~et~~~~~i~~~~lP-G~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~v 210 (310)
..+.+.|..+.+.+.|++. || |++++|+.|.+..+. |.| ... +. . .-...|...|
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~-lp~~~~~kdv~V~i~~~~--L~v--~~k--------g~----------~-~l~g~L~~~I 67 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQ-VPPGTRAQDIQCGLQSRH--VAL--AVG--------GR----------E-ILKGKLFDST 67 (157)
T ss_dssp ECSSEEEEECSSEEEEEEE-CCTTCCGGGEEEEECSSE--EEE--EET--------TE----------E-EEEEEBSSCB
T ss_pred CCCcEEEEecCCEEEEEEE-CCCCCcccceEEEEecCE--EEE--EEC--------CE----------E-EEeecccccc
Confidence 4588999999999999999 98 899999999999999 988 432 00 0 1235688999
Q ss_pred ccCCeEEEeeeCCE-EEEEEeCC
Q 041271 211 RLDDFKTEMEEDGV-LTVTFTKP 232 (310)
Q Consensus 211 d~~~I~A~l~~dGv-L~ItvPK~ 232 (310)
+++.-+-.+. +|- |.|++-|.
T Consensus 68 ~~eeS~w~i~-~~k~v~I~L~K~ 89 (157)
T 2rh0_A 68 IADEGTWTLE-DRKMVRIVLTKT 89 (157)
T ss_dssp CGGGCEEEEE-CCCEEEEEEEBS
T ss_pred CccccEEEEc-CCcEEEEEEEEc
Confidence 9999899999 874 99999998
No 48
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=95.15 E-value=0.072 Score=42.85 Aligned_cols=78 Identities=17% Similarity=0.247 Sum_probs=62.7
Q ss_pred eeeEEEeCCEEEEEEEcCCCCCCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCcceeeeeCCeE
Q 041271 26 STRWEYDGDKIVCKASLPAVRMEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNFKSTSMEDGVL 105 (310)
Q Consensus 26 ~~dv~E~ed~y~v~vdLPGv~~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~~dGvL 105 (310)
.++|+.+.+...|+|.+|++ +++.|.+..+.|.+.+.... ++ ..|.-.+.|-..++ ++..+....+..+
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~-~~-------~~y~~~l~L~~~I~-~e~S~~~v~~~ki 73 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGS-DN-------FKHLNEIDLFHCID-PNDSKHKRTDRSI 73 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETT-TT-------EEEEEEEEBSSCEE-EEEEEEEECSSCE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCC-CC-------ceEEEEEEccceec-cccCEEEECCCEE
Confidence 79999999999999999996 79999999999999965310 00 12566778888888 7777777788889
Q ss_pred EEEeecccc
Q 041271 106 TVTFTRDAA 114 (310)
Q Consensus 106 ~I~lPK~~~ 114 (310)
.|++.|...
T Consensus 74 ei~L~K~~~ 82 (125)
T 1ejf_A 74 LCCLRKGES 82 (125)
T ss_dssp EEEEEESST
T ss_pred EEEEEECCC
Confidence 999998753
No 49
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=94.72 E-value=0.021 Score=46.80 Aligned_cols=84 Identities=11% Similarity=0.207 Sum_probs=58.1
Q ss_pred ecceEEEeecCcE-------EEEEEecCCCCCCCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEE
Q 041271 132 LNAVIYWETSLDK-------HVLKASLLPGMKKEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRF 204 (310)
Q Consensus 132 ~~p~vdv~et~~~-------~~i~~~~lPG~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~ 204 (310)
..|.+++..+.+. +.|++. +|++. ++.|.+..+. |.+ ++........... ..|.-.+
T Consensus 5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~-~~~~~--~~~V~~~~~~--l~~--~~~~~~~~g~~~~---------~~y~~~l 68 (134)
T 2cg9_X 5 INPQVAWAQRSSTTDPERNYVLITVS-IADCD--APELTIKPSY--IEL--KAQSKPHVGDENV---------HHYQLHI 68 (134)
T ss_dssp ------CBCCCEEECCCSSEEEEECC-CSSEE--SCCCCBCSSE--EEE--CCEEC-------C---------EEBCEEE
T ss_pred cCCCEEEEeCCCCcCCcCCEEEEEEE-ecCCC--ceEEEEECCE--EEE--EEecccccCCccC---------ceEEEEE
Confidence 4578899999887 999999 99974 8999999999 999 5442110000000 1355668
Q ss_pred ECCCCcccCCeEEEeeeCCE-EEEEEeCC
Q 041271 205 KLPADVRLDDFKTEMEEDGV-LTVTFTKP 232 (310)
Q Consensus 205 ~LP~~vd~~~I~A~l~~dGv-L~ItvPK~ 232 (310)
.|...|+++.-+..+. ++. |.|+|.|.
T Consensus 69 ~L~~~Idpe~S~~~v~-~~~~vei~L~K~ 96 (134)
T 2cg9_X 69 DLYKEIIPEKTMHKVA-NGQHYFLKLYKK 96 (134)
T ss_dssp ECSSCCCSSSEEEEEC-CC--CEEEEEEC
T ss_pred EChhhccccccEEEEC-CCEEEEEEEEEC
Confidence 8999999999999999 888 99999998
No 50
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=94.31 E-value=0.13 Score=42.90 Aligned_cols=77 Identities=16% Similarity=0.274 Sum_probs=62.0
Q ss_pred ecceEEEeecCcEEEEEEecCCCCCCCCeEEEEE-CCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCc
Q 041271 132 LNAVIYWETSLDKHVLKASLLPGMKKEDVKIEIE-DDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADV 210 (310)
Q Consensus 132 ~~p~vdv~et~~~~~i~~~~lPG~~~edI~V~v~-~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~v 210 (310)
..|.++|..+.+.+.|++. ++++ ++++|+++ .+. |.+ ++. ...+. .|.-.+.|=..|
T Consensus 3 ~~P~~~W~Qt~~~V~ltI~-l~~~--~~v~V~~~~~~~--l~~--~~~-----~~~~~----------~y~~~l~L~~~I 60 (150)
T 2kmw_A 3 RNPEVLWAQRSDKVYLTVA-LPDA--KDISVKCEPQGL--FSF--SAL-----GAQGE----------RFEFSLELYGKI 60 (150)
T ss_dssp ECCCEEEEECSSEEEEEEC-CSSE--EEEEECCCTTEE--EEE--EEE-----TTTTE----------EEEEEEEBSSCE
T ss_pred cCCcEEEEeCCCEEEEEEE-eCCC--CceEEEEecCCE--EEE--EEE-----cCCCc----------eEEEEeEhhhcc
Confidence 4589999999999999999 9997 58999998 677 888 654 11111 355667888899
Q ss_pred ccCCeEEEeeeCCEEEEEEeCC
Q 041271 211 RLDDFKTEMEEDGVLTVTFTKP 232 (310)
Q Consensus 211 d~~~I~A~l~~dGvL~ItvPK~ 232 (310)
+++ -+.+.. ..-+.|++.|.
T Consensus 61 dpe-S~~~v~-~~kIei~L~K~ 80 (150)
T 2kmw_A 61 MTE-YRKNVG-LRNIIFSIQKE 80 (150)
T ss_dssp EEE-EEEEEE-SSSEEEEEEEC
T ss_pred ccc-ceEEec-CCEEEEEEEEC
Confidence 999 888888 78899999997
No 51
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=94.31 E-value=0.019 Score=46.98 Aligned_cols=85 Identities=11% Similarity=0.178 Sum_probs=58.4
Q ss_pred CCceeeEEEeCCE-------EEEEEEcCCCCCCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCc
Q 041271 23 SNISTRWEYDGDK-------IVCKASLPAVRMEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNF 95 (310)
Q Consensus 23 ~~~~~dv~E~ed~-------y~v~vdLPGv~~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~ 95 (310)
..|.++|..+.+. ..|+|.+|++. +++|.+..+.|.|++......+..... .|.-.+.|...|+ ++.
T Consensus 5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~~~l~~~~~~~~~~g~~~~~---~y~~~l~L~~~Id-pe~ 78 (134)
T 2cg9_X 5 INPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKPSYIELKAQSKPHVGDENVH---HYQLHIDLYKEII-PEK 78 (134)
T ss_dssp ------CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCSSEEEECCEEC-------CE---EBCEEEECSSCCC-SSS
T ss_pred cCCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEECCEEEEEEecccccCCccCc---eEEEEEEChhhcc-ccc
Confidence 3577888888776 99999999974 889999999999986542100000001 3466788999999 888
Q ss_pred ceeeeeCCe-EEEEeeccc
Q 041271 96 KSTSMEDGV-LTVTFTRDA 113 (310)
Q Consensus 96 ~~A~~~dGv-L~I~lPK~~ 113 (310)
....+.++. +.|.+.|..
T Consensus 79 S~~~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 79 TMHKVANGQHYFLKLYKKD 97 (134)
T ss_dssp EEEEECCC--CEEEEEECS
T ss_pred cEEEECCCEEEEEEEEECC
Confidence 888888888 999999875
No 52
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=93.75 E-value=0.15 Score=42.44 Aligned_cols=78 Identities=13% Similarity=0.258 Sum_probs=62.2
Q ss_pred CceeeEEEeCCEEEEEEEcCCCCCCceEEEEe-CCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCcceeeeeC
Q 041271 24 NISTRWEYDGDKIVCKASLPAVRMEDVKIDIN-DKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNFKSTSMED 102 (310)
Q Consensus 24 ~~~~dv~E~ed~y~v~vdLPGv~~edI~V~v~-~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~~d 102 (310)
.|.++|+.+.+..+|+|.+|++ ++++|.+. .+.|.+++. ..++ ..|.-.+.|=..|+ ++ .+.....
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~--~~~~-------~~y~~~l~L~~~Id-pe-S~~~v~~ 70 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSAL--GAQG-------ERFEFSLELYGKIM-TE-YRKNVGL 70 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEE--TTTT-------EEEEEEEEBSSCEE-EE-EEEEEES
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEE--cCCC-------ceEEEEeEhhhccc-cc-ceEEecC
Confidence 5789999999999999999997 57899998 789999975 1111 13456678888888 66 7777778
Q ss_pred CeEEEEeecccc
Q 041271 103 GVLTVTFTRDAA 114 (310)
Q Consensus 103 GvL~I~lPK~~~ 114 (310)
.-+.|++.|...
T Consensus 71 ~kIei~L~K~e~ 82 (150)
T 2kmw_A 71 RNIIFSIQKEER 82 (150)
T ss_dssp SSEEEEEEECCS
T ss_pred CEEEEEEEECCC
Confidence 889999998764
No 53
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=67.33 E-value=17 Score=31.86 Aligned_cols=141 Identities=9% Similarity=0.064 Sum_probs=77.5
Q ss_pred CCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCcceeeeeCCeEEEEeecccccc---ccccccc
Q 041271 47 MEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNFKSTSMEDGVLTVTFTRDAAAT---ANTSSRS 123 (310)
Q Consensus 47 ~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~~dGvL~I~lPK~~~a~---a~~~s~~ 123 (310)
|+.|+|.++++.++|+|.+ |+..+.| +..+ ....+|+.|.+..+...... .......
T Consensus 39 P~gV~V~i~~~~VtVKGPk------------G~L~~~~--~~~v------~i~~e~~~i~v~~~~~~k~~ra~~Gt~rsl 98 (212)
T 1nkw_E 39 PSGVTVNAQDGVFKVKGPK------------GELTVPY--NTEL------TVRQDGDQLLVERPSDAQKHRALHGLTRTL 98 (212)
T ss_pred CCCcEEEEeCCEEEEECCC------------EEEEEEC--CCCe------EEEEECCEEEEEcCCCCHHHHHHHHHHHHH
Confidence 5889999999999999854 3444444 4433 34567888888755442110 0000000
Q ss_pred cchheee---eecc-------eEEEeecCcEEEE--------EEecCCCCCCCCeEEEEECCeeeEEEEEEEEeeecccC
Q 041271 124 VYKKVIA---FLNA-------VIYWETSLDKHVL--------KASLLPGMKKEDVKIEIEDDGAELKMIVLLETEEEEGD 185 (310)
Q Consensus 124 ~~~~~~~---~~~p-------~vdv~et~~~~~i--------~~~~lPG~~~edI~V~v~~~~~~L~I~~~g~~~~~~~~ 185 (310)
......+ .+.- -+.+...++.+.| .+. + +++|+|++.++. .|.| +|.-++.
T Consensus 99 I~NMI~GVt~Gf~kkLelvGvGYra~~~G~~L~L~LG~SHpv~~~-i----P~GI~v~v~~~t-~Iiv--~GiDKq~--- 167 (212)
T 1nkw_E 99 VANAVKGVSDGYTINLELRGVGFRAKLTGKALEMNIGYSHPVIIE-P----PAGVTFAVPEPT-RIDV--SGIDKQL--- 167 (212)
T ss_pred hhCEEEeeccCeEEEEEEeeeeeEEEcCCCEEEEEccCCccEEEE-C----CCCeEEEeCCCC-EEEE--EeCCHHH---
Confidence 0000000 0100 1112222333333 223 2 478899988763 3888 7765433
Q ss_pred CCccEEEEeeecce---EEEEEECCCCcccCCeEEEeeeCCEEEEEEeCC
Q 041271 186 TIPEWLLEEFTDGK---IIRRFKLPADVRLDDFKTEMEEDGVLTVTFTKP 232 (310)
Q Consensus 186 ~~~~~~~~E~~~g~---F~R~~~LP~~vd~~~I~A~l~~dGvL~ItvPK~ 232 (310)
.|+ --|.|.-|+.+.-..|. |. |=.+....-|.
T Consensus 168 -----------VGq~AA~IR~~R~PEPYKGKGIr--y~-~E~I~rK~gK~ 203 (212)
T 1nkw_E 168 -----------VGQVAANVRKVRKPDAYHGKGVR--FV-GEQIALKAGKA 203 (212)
T ss_pred -----------HHHHHHHHhccCCCCCcCCCcEe--EC-CeEEEEcCccc
Confidence 233 35788899999999988 77 66665554444
No 54
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=36.43 E-value=73 Score=24.20 Aligned_cols=19 Identities=16% Similarity=0.300 Sum_probs=16.6
Q ss_pred CCceEEEEeCCEEEEEEEE
Q 041271 47 MEDVKIDINDKELTLTREL 65 (310)
Q Consensus 47 ~edI~V~v~~~~L~I~g~~ 65 (310)
|+.|+|.++++.++|+|.+
T Consensus 20 P~gV~V~i~~~~VtVKGPk 38 (100)
T 2cql_A 20 PENVDITLKGRTVIVKGPR 38 (100)
T ss_dssp CSSCEEEEETTEEEEEETT
T ss_pred CCCCEEEEeCCEEEEECCC
Confidence 5889999999999999844
No 55
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=34.76 E-value=60 Score=24.71 Aligned_cols=18 Identities=17% Similarity=0.187 Sum_probs=13.0
Q ss_pred CCCeEEEEECCeeeEEEEEEEE
Q 041271 157 KEDVKIEIEDDGAELKMIVLLE 178 (310)
Q Consensus 157 ~edI~V~v~~~~~~L~I~~~g~ 178 (310)
|+.++|+++++. ++| .|.
T Consensus 20 P~gV~V~i~~~~--VtV--KGP 37 (100)
T 2cql_A 20 PENVDITLKGRT--VIV--KGP 37 (100)
T ss_dssp CSSCEEEEETTE--EEE--EET
T ss_pred CCCCEEEEeCCE--EEE--ECC
Confidence 467778888877 777 654
No 56
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=29.75 E-value=95 Score=26.10 Aligned_cols=46 Identities=24% Similarity=0.360 Sum_probs=32.2
Q ss_pred CCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCcceeeeeCCeEEEEeecc
Q 041271 47 MEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNFKSTSMEDGVLTVTFTRD 112 (310)
Q Consensus 47 ~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~~dGvL~I~lPK~ 112 (310)
|+.|+|.++++.++|+|.+ |+..+.| +..++ ...+|+.|.+..+..
T Consensus 11 P~gV~V~i~~~~VtVkGpk------------G~L~~~~--~~~v~------i~~~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKGPK------------GELTRTF--HPDMT------ITVEGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEETTEEEEEETT------------EEEEEEC--CTTCE------EEEETTEEEEECSCC
T ss_pred CCCCEEEEeCCEEEEECCC------------eEEEEEc--CCCEE------EEEeCCEEEEEcCCC
Confidence 5789999999999999843 4444444 44333 456899888875544
No 57
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=27.79 E-value=1.1e+02 Score=25.64 Aligned_cols=46 Identities=22% Similarity=0.372 Sum_probs=32.2
Q ss_pred CCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCcccCCeEEEeeeCCEEEEEEeCC
Q 041271 157 KEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADVRLDDFKTEMEEDGVLTVTFTKP 232 (310)
Q Consensus 157 ~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~vd~~~I~A~l~~dGvL~ItvPK~ 232 (310)
|+.++|+++++. ++| .|. -|...+.| +.. |...++ ||.|+|+.+..
T Consensus 11 P~gV~V~i~~~~--VtV--kGp------------------kG~L~~~~--~~~-----v~i~~~-~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNGNT--VTV--KGP------------------KGELTRTF--HPD-----MTITVE-GNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEETTE--EEE--EET------------------TEEEEEEC--CTT-----CEEEEE-TTEEEEECSCC
T ss_pred CCCCEEEEeCCE--EEE--ECC------------------CeEEEEEc--CCC-----EEEEEe-CCEEEEEcCCC
Confidence 478899999998 999 765 34555544 443 455678 99988886544
No 58
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=24.97 E-value=1.4e+02 Score=25.90 Aligned_cols=46 Identities=13% Similarity=0.217 Sum_probs=31.2
Q ss_pred CCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCcccCCeEEEeeeCCEEEEEEeCC
Q 041271 157 KEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADVRLDDFKTEMEEDGVLTVTFTKP 232 (310)
Q Consensus 157 ~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~vd~~~I~A~l~~dGvL~ItvPK~ 232 (310)
|+.++|+++++. ++| .|. -|...+.| +.. |....+ ||.|+|+.+..
T Consensus 39 P~gV~V~i~~~~--VtV--KGP------------------kG~L~~~~--~~~-----v~i~~e-~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQDGV--FKV--KGP------------------KGELTVPY--NTE-----LTVRQD-GDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeCCE--EEE--ECC------------------CEEEEEEC--CCC-----eEEEEE-CCEEEEEcCCC
Confidence 478899999988 999 765 24455444 433 445567 88888876544
No 59
>3rd4_A Uncharacterized protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, propen_03304, unknown function; 2.90A {Proteus penneri}
Probab=24.38 E-value=48 Score=25.52 Aligned_cols=36 Identities=11% Similarity=-0.001 Sum_probs=27.1
Q ss_pred EEeCCEEEEEEEcCCCCCCceEEEE-----------eCCEEEEEEEE
Q 041271 30 EYDGDKIVCKASLPAVRMEDVKIDI-----------NDKELTLTREL 65 (310)
Q Consensus 30 ~E~ed~y~v~vdLPGv~~edI~V~v-----------~~~~L~I~g~~ 65 (310)
.+++..|.|.++||.-.-+.+++.+ +.+.|+..|.+
T Consensus 32 ~~~~~~Y~itF~~p~~~G~~~ef~v~~~~Y~~L~~Gd~G~Lt~QGTR 78 (100)
T 3rd4_A 32 PEITHYYQVTFRLTTDDRKDLVLNIDKSSYQNIEPEMKGRLFMQGSR 78 (100)
T ss_dssp --CCCEEEEEEEESSSSCEEEEEECCHHHHHTCCTTCEEEEEEETTE
T ss_pred CCCceEEEEEEEecCCCCCeEEEEECHHHcCCCCCCCEEEEEEeeeE
Confidence 4678999999999988888888887 34577777644
No 60
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=23.86 E-value=1.3e+02 Score=25.31 Aligned_cols=44 Identities=11% Similarity=0.212 Sum_probs=30.7
Q ss_pred CCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCcceeeeeCCeEEEEee
Q 041271 47 MEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNFKSTSMEDGVLTVTFT 110 (310)
Q Consensus 47 ~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~~dGvL~I~lP 110 (310)
|+.|+|.++++.++|+|.+ |+..|.| +..++ -..+++.|.+...
T Consensus 12 P~gV~v~i~~~~v~VkGpk------------G~L~~~~--~~~v~------i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAPGRVKVKGPK------------GELEVPV--SPEMR------VVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEETTEEEEECSS------------CEEEEEC--CTTSE------EEEETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEeCC------------cEEEEEe--CCCEE------EEEECCEEEEEEC
Confidence 5889999999999999743 4445444 33333 4467888888754
No 61
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=23.19 E-value=1.4e+02 Score=25.16 Aligned_cols=47 Identities=17% Similarity=0.297 Sum_probs=31.5
Q ss_pred CCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCcccCCeEEEeeeCCEEEEEEeCC
Q 041271 157 KEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADVRLDDFKTEMEEDGVLTVTFTKP 232 (310)
Q Consensus 157 ~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~vd~~~I~A~l~~dGvL~ItvPK~ 232 (310)
|+.++|+++++. ++| +|. -|...+.|. +.. |+..++ +|.|+|+.+..
T Consensus 9 P~gV~v~i~~~~--vtV--kGp------------------kG~L~~~~~-~~~-----v~i~~~-~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDHLD--ITV--EGD------------------NGSVTRRLW-YPD-----IDVSVD-GDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEETTE--EEE--EET------------------TEEEEEECC-CTT-----CEEEEE-TTEEEEECSCC
T ss_pred CCCCEEEEeCCE--EEE--ECC------------------CeEEEEEEE-CCe-----EEEEEE-CCEEEEEcCCC
Confidence 478899999988 888 765 345555442 333 445577 99988875543
No 62
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=22.75 E-value=1e+02 Score=22.04 Aligned_cols=32 Identities=13% Similarity=0.115 Sum_probs=22.4
Q ss_pred CCeEEEeeeCCEEEEEEeCCCCCCCCCceEEEEecCc
Q 041271 213 DDFKTEMEEDGVLTVTFTKPIKPKKTQQQLISKLLGF 249 (310)
Q Consensus 213 ~~I~A~l~~dGvL~ItvPK~~~~~~~~~r~I~I~~~~ 249 (310)
..|+|.|+ ||+|+-.=| -.-+...++.|.+..
T Consensus 3 k~IeAiYE-nGVfkPLe~----l~L~EG~kV~I~I~~ 34 (69)
T 2nwt_A 3 KIIEAVYE-NGVFKPLQK----VDLKEGERVKIKLEL 34 (69)
T ss_dssp CCEEEEEE-TTEEEESSC----CCCCTTEEEEEECCC
T ss_pred ceEEEEEE-CCEEeECCc----CCCCCCCEEEEEEEe
Confidence 45999999 999974433 335556777777754
No 63
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=22.74 E-value=1.5e+02 Score=24.88 Aligned_cols=47 Identities=17% Similarity=0.212 Sum_probs=31.7
Q ss_pred CCceEEEEeCCEEEEEEEEEecccceeEEeecceEEeeeCCcccCcCCcceeeeeCCeEEEEeecc
Q 041271 47 MEDVKIDINDKELTLTRELNIADGGTILRRFLKVSRNFDLPDGVKRSNFKSTSMEDGVLTVTFTRD 112 (310)
Q Consensus 47 ~edI~V~v~~~~L~I~g~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~~~~A~~~dGvL~I~lPK~ 112 (310)
|+.|+|.++++.++|+|.+ |+..+.|. +.. +.-..+|+.|.+..+..
T Consensus 9 P~gV~v~i~~~~vtVkGpk------------G~L~~~~~-~~~------v~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDHLDITVEGDN------------GSVTRRLW-YPD------IDVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEETTEEEEEETT------------EEEEEECC-CTT------CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeCCEEEEECCC------------eEEEEEEE-CCe------EEEEEECCEEEEEcCCC
Confidence 4789999999999999844 44444442 333 33456788888875543
No 64
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.77 E-value=1.3e+02 Score=25.43 Aligned_cols=45 Identities=24% Similarity=0.351 Sum_probs=30.2
Q ss_pred CCCeEEEEECCeeeEEEEEEEEeeecccCCCccEEEEeeecceEEEEEECCCCcccCCeEEEeeeCCEEEEEEe
Q 041271 157 KEDVKIEIEDDGAELKMIVLLETEEEEGDTIPEWLLEEFTDGKIIRRFKLPADVRLDDFKTEMEEDGVLTVTFT 230 (310)
Q Consensus 157 ~edI~V~v~~~~~~L~I~~~g~~~~~~~~~~~~~~~~E~~~g~F~R~~~LP~~vd~~~I~A~l~~dGvL~ItvP 230 (310)
|++++|+++++. ++| .|. -|.-.|.|.-| . |.-.++ +|.|+|+.+
T Consensus 14 P~gV~v~i~~~~--V~V--kGp------------------kG~L~~~~~~~-~-----v~i~~~-~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEGYK--VKV--KGP------------------KGELEREFFWP-G-----IQIFTE-DGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESSSE--EEE--ECS------------------SCEEEEECCCT-T-----CEEEEE-TTEEEEECS
T ss_pred CCCcEEEEeCCE--EEE--EcC------------------CeEEEEEecCC-c-----EEEEEe-CCEEEEEEC
Confidence 488999998888 888 665 34555554322 2 445577 898888753
Done!