Query 041272
Match_columns 267
No_of_seqs 290 out of 1672
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 08:50:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041272.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041272hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mti_A RRNA methylase; SAM-dep 100.0 2E-27 6.7E-32 192.1 20.5 178 78-267 6-184 (185)
2 3eey_A Putative rRNA methylase 99.9 9.6E-26 3.3E-30 183.9 21.8 182 78-267 6-188 (197)
3 4gek_A TRNA (CMO5U34)-methyltr 99.8 2.9E-19 9.8E-24 152.3 17.2 123 82-223 58-182 (261)
4 4df3_A Fibrillarin-like rRNA/T 99.8 1.5E-19 5.1E-24 150.8 13.0 157 90-266 73-232 (233)
5 3evz_A Methyltransferase; NYSG 99.8 2.1E-17 7.1E-22 137.5 16.9 147 88-253 49-206 (230)
6 3dh0_A SAM dependent methyltra 99.8 2.1E-17 7.1E-22 136.3 15.5 145 91-254 34-182 (219)
7 1nt2_A Fibrillarin-like PRE-rR 99.7 3.8E-17 1.3E-21 134.8 15.9 142 91-254 54-196 (210)
8 3lpm_A Putative methyltransfer 99.7 3.2E-17 1.1E-21 139.3 15.0 147 91-255 45-203 (259)
9 3orh_A Guanidinoacetate N-meth 99.7 4E-17 1.4E-21 136.9 13.1 119 86-219 52-170 (236)
10 1nkv_A Hypothetical protein YJ 99.7 5.2E-17 1.8E-21 137.1 13.8 109 91-220 33-141 (256)
11 2ipx_A RRNA 2'-O-methyltransfe 99.7 2.2E-16 7.5E-21 131.8 17.2 145 91-255 74-219 (233)
12 1pjz_A Thiopurine S-methyltran 99.7 3.8E-17 1.3E-21 133.9 12.3 147 91-255 19-178 (203)
13 3e05_A Precorrin-6Y C5,15-meth 99.7 7.4E-16 2.5E-20 125.9 19.6 124 90-241 36-159 (204)
14 3a27_A TYW2, uncharacterized p 99.7 1.9E-16 6.5E-21 135.6 16.2 108 91-223 116-223 (272)
15 1xdz_A Methyltransferase GIDB; 99.7 2.8E-16 9.6E-21 131.9 16.9 134 93-253 69-202 (240)
16 3id6_C Fibrillarin-like rRNA/T 99.7 1.9E-16 6.3E-21 132.3 15.5 143 90-255 72-218 (232)
17 4hg2_A Methyltransferase type 99.7 8E-17 2.8E-21 136.8 13.1 118 91-237 36-153 (257)
18 2ozv_A Hypothetical protein AT 99.7 2.2E-16 7.5E-21 134.3 15.7 122 92-220 34-171 (260)
19 3njr_A Precorrin-6Y methylase; 99.7 1E-15 3.4E-20 125.6 19.1 120 91-241 52-171 (204)
20 3g89_A Ribosomal RNA small sub 99.7 3.6E-16 1.2E-20 132.2 16.6 136 93-255 79-214 (249)
21 3dlc_A Putative S-adenosyl-L-m 99.7 9.7E-17 3.3E-21 131.7 12.7 109 92-221 42-150 (219)
22 4dmg_A Putative uncharacterize 99.7 6.6E-16 2.2E-20 138.7 18.7 162 85-261 205-366 (393)
23 1g8a_A Fibrillarin-like PRE-rR 99.7 1E-15 3.5E-20 127.1 18.2 154 92-266 71-226 (227)
24 3lcc_A Putative methyl chlorid 99.7 1.2E-16 4.1E-21 133.4 12.5 140 94-255 66-209 (235)
25 3dxy_A TRNA (guanine-N(7)-)-me 99.7 1.7E-16 5.9E-21 131.6 13.3 119 93-220 33-151 (218)
26 3kkz_A Uncharacterized protein 99.7 2.5E-16 8.6E-21 134.0 14.7 141 92-253 44-196 (267)
27 3bus_A REBM, methyltransferase 99.7 4.3E-16 1.5E-20 132.8 16.1 112 91-222 58-169 (273)
28 3p9n_A Possible methyltransfer 99.7 6.3E-16 2.1E-20 124.9 16.3 111 93-221 43-155 (189)
29 3f4k_A Putative methyltransfer 99.7 3E-16 1E-20 132.5 14.6 142 91-253 43-196 (257)
30 1vl5_A Unknown conserved prote 99.7 2.2E-16 7.4E-21 133.8 13.6 110 91-222 34-143 (260)
31 4fsd_A Arsenic methyltransfera 99.7 8.5E-16 2.9E-20 137.8 18.0 119 92-222 81-206 (383)
32 1yzh_A TRNA (guanine-N(7)-)-me 99.7 3.7E-16 1.3E-20 128.8 14.4 116 93-220 40-157 (214)
33 2fca_A TRNA (guanine-N(7)-)-me 99.7 4E-16 1.4E-20 128.8 14.4 116 93-220 37-154 (213)
34 1fbn_A MJ fibrillarin homologu 99.7 9E-16 3.1E-20 128.0 16.7 144 91-255 71-215 (230)
35 4htf_A S-adenosylmethionine-de 99.7 4.1E-16 1.4E-20 133.9 15.0 109 92-220 66-174 (285)
36 3hem_A Cyclopropane-fatty-acyl 99.7 4.2E-16 1.4E-20 135.1 15.0 117 90-222 68-186 (302)
37 3vc1_A Geranyl diphosphate 2-C 99.7 4.3E-16 1.5E-20 135.8 15.1 142 92-254 115-270 (312)
38 1xxl_A YCGJ protein; structura 99.7 7E-16 2.4E-20 129.2 15.9 110 91-222 18-127 (239)
39 3tfw_A Putative O-methyltransf 99.7 1.6E-15 5.6E-20 128.0 18.0 111 92-220 61-171 (248)
40 3ocj_A Putative exported prote 99.7 1.6E-16 5.3E-21 138.1 11.9 115 88-221 112-229 (305)
41 1kpg_A CFA synthase;, cyclopro 99.7 9.3E-16 3.2E-20 131.7 16.3 109 91-222 61-171 (287)
42 2o57_A Putative sarcosine dime 99.7 4.2E-16 1.4E-20 134.6 14.0 111 91-221 79-189 (297)
43 3sm3_A SAM-dependent methyltra 99.7 1.1E-15 3.7E-20 126.9 15.9 115 90-222 26-144 (235)
44 2b3t_A Protein methyltransfera 99.7 3.4E-15 1.1E-19 127.9 19.1 130 93-240 108-253 (276)
45 3fzg_A 16S rRNA methylase; met 99.7 3.8E-16 1.3E-20 125.2 12.2 149 91-267 46-198 (200)
46 2b78_A Hypothetical protein SM 99.7 1.3E-15 4.4E-20 136.7 17.1 123 93-223 211-335 (385)
47 2ex4_A Adrenal gland protein A 99.7 1.5E-15 5.2E-20 127.2 16.3 136 94-253 79-225 (241)
48 3l8d_A Methyltransferase; stru 99.7 4.6E-16 1.6E-20 130.0 13.1 109 88-221 47-155 (242)
49 3dtn_A Putative methyltransfer 99.7 1.3E-15 4.6E-20 126.8 15.8 108 92-222 42-151 (234)
50 3ujc_A Phosphoethanolamine N-m 99.7 7.6E-16 2.6E-20 130.3 14.5 109 91-222 52-162 (266)
51 3grz_A L11 mtase, ribosomal pr 99.7 7.4E-16 2.5E-20 125.9 13.9 136 83-252 49-184 (205)
52 3hm2_A Precorrin-6Y C5,15-meth 99.7 2.1E-15 7.2E-20 120.0 16.2 123 91-241 22-144 (178)
53 3g5t_A Trans-aconitate 3-methy 99.7 6.7E-16 2.3E-20 133.6 13.9 120 85-220 27-150 (299)
54 3g5l_A Putative S-adenosylmeth 99.7 1.4E-15 4.7E-20 128.2 15.5 103 94-220 44-146 (253)
55 1zx0_A Guanidinoacetate N-meth 99.7 4.4E-16 1.5E-20 130.3 12.2 121 85-220 51-171 (236)
56 3dmg_A Probable ribosomal RNA 99.7 1.1E-15 3.9E-20 136.7 15.6 143 93-257 232-377 (381)
57 3fpf_A Mtnas, putative unchara 99.7 8.7E-16 3E-20 132.0 14.2 105 90-220 118-223 (298)
58 2frn_A Hypothetical protein PH 99.7 2.5E-16 8.5E-21 135.3 10.8 108 89-221 120-227 (278)
59 1l3i_A Precorrin-6Y methyltran 99.7 6.9E-15 2.4E-19 118.0 18.5 122 91-241 30-151 (192)
60 3e8s_A Putative SAM dependent 99.7 9.3E-16 3.2E-20 126.5 13.4 138 92-255 50-211 (227)
61 3i9f_A Putative type 11 methyl 99.7 2.2E-15 7.6E-20 119.3 14.7 132 91-254 14-149 (170)
62 2yxd_A Probable cobalt-precorr 99.7 2E-14 6.7E-19 114.6 20.3 117 91-241 32-148 (183)
63 3r3h_A O-methyltransferase, SA 99.7 7.7E-16 2.6E-20 129.6 12.5 138 92-247 58-205 (242)
64 1ve3_A Hypothetical protein PH 99.7 1.9E-15 6.4E-20 125.0 14.7 110 90-220 34-143 (227)
65 4dcm_A Ribosomal RNA large sub 99.7 6.9E-16 2.4E-20 137.9 12.9 148 93-257 221-372 (375)
66 1ws6_A Methyltransferase; stru 99.7 2E-15 6.9E-20 119.2 14.2 109 92-222 39-150 (171)
67 2nxc_A L11 mtase, ribosomal pr 99.7 3.6E-15 1.2E-19 126.4 16.5 134 84-252 110-243 (254)
68 4dzr_A Protein-(glutamine-N5) 99.7 2.2E-16 7.6E-21 129.2 8.7 119 93-220 29-165 (215)
69 3dr5_A Putative O-methyltransf 99.7 8.4E-16 2.9E-20 127.7 12.2 107 94-219 56-163 (221)
70 3h2b_A SAM-dependent methyltra 99.7 7.7E-16 2.6E-20 125.4 11.7 131 95-255 42-184 (203)
71 2p7i_A Hypothetical protein; p 99.7 2.9E-16 1E-20 131.3 9.3 102 93-221 41-143 (250)
72 1y8c_A S-adenosylmethionine-de 99.6 5.3E-15 1.8E-19 123.5 16.8 115 83-220 26-143 (246)
73 3mgg_A Methyltransferase; NYSG 99.6 1.2E-15 4.1E-20 130.3 12.9 109 92-220 35-143 (276)
74 2gb4_A Thiopurine S-methyltran 99.6 1.2E-15 4.1E-20 129.2 12.8 113 93-220 67-192 (252)
75 3lbf_A Protein-L-isoaspartate 99.6 2.4E-15 8.1E-20 123.3 14.2 103 91-221 74-176 (210)
76 3u81_A Catechol O-methyltransf 99.6 1.8E-15 6.2E-20 125.3 13.5 112 93-220 57-171 (221)
77 1dus_A MJ0882; hypothetical pr 99.6 1.1E-14 3.8E-19 117.0 17.7 108 92-221 50-159 (194)
78 3p2e_A 16S rRNA methylase; met 99.6 3.1E-16 1.1E-20 130.6 8.8 117 89-219 19-139 (225)
79 3ajd_A Putative methyltransfer 99.6 1.9E-15 6.4E-20 129.5 13.8 141 91-240 80-230 (274)
80 1xtp_A LMAJ004091AAA; SGPP, st 99.6 6.8E-15 2.3E-19 123.8 17.1 106 92-220 91-198 (254)
81 2xvm_A Tellurite resistance pr 99.6 3.3E-15 1.1E-19 120.9 14.5 107 92-221 30-138 (199)
82 3e23_A Uncharacterized protein 99.6 6.2E-15 2.1E-19 120.8 16.3 104 91-223 40-145 (211)
83 3ou2_A SAM-dependent methyltra 99.6 2.5E-15 8.7E-20 123.3 13.8 104 92-222 44-149 (218)
84 2pwy_A TRNA (adenine-N(1)-)-me 99.6 4.1E-15 1.4E-19 125.5 15.4 126 90-247 92-218 (258)
85 1yb2_A Hypothetical protein TA 99.6 2.1E-15 7.3E-20 129.1 13.7 127 91-250 107-234 (275)
86 3ofk_A Nodulation protein S; N 99.6 1.6E-15 5.5E-20 124.7 12.4 104 92-220 49-155 (216)
87 3gu3_A Methyltransferase; alph 99.6 9.9E-16 3.4E-20 131.7 11.6 109 92-221 20-128 (284)
88 2a14_A Indolethylamine N-methy 99.6 5.9E-16 2E-20 131.8 10.1 147 91-254 52-239 (263)
89 3mb5_A SAM-dependent methyltra 99.6 4.4E-15 1.5E-19 125.4 15.2 107 90-220 89-195 (255)
90 1nv8_A HEMK protein; class I a 99.6 2.4E-15 8.2E-20 129.5 13.8 113 94-219 123-249 (284)
91 2fk8_A Methoxy mycolic acid sy 99.6 2.9E-15 1E-19 130.6 14.4 109 91-222 87-197 (318)
92 3jwh_A HEN1; methyltransferase 99.6 2.3E-15 8E-20 124.0 13.1 113 92-220 27-142 (217)
93 2igt_A SAM dependent methyltra 99.6 4.5E-15 1.5E-19 130.5 15.5 123 93-224 152-277 (332)
94 3duw_A OMT, O-methyltransferas 99.6 3.4E-15 1.2E-19 123.5 14.0 111 92-220 56-168 (223)
95 2kw5_A SLR1183 protein; struct 99.6 4.8E-15 1.6E-19 120.6 14.6 106 92-221 28-133 (202)
96 2ift_A Putative methylase HI07 99.6 2.2E-15 7.5E-20 123.2 12.5 110 94-222 53-166 (201)
97 1ixk_A Methyltransferase; open 99.6 6.6E-15 2.3E-19 128.6 16.3 137 91-239 115-264 (315)
98 3tma_A Methyltransferase; thum 99.6 1E-14 3.5E-19 129.3 17.7 153 91-266 200-353 (354)
99 1wxx_A TT1595, hypothetical pr 99.6 5.2E-15 1.8E-19 132.6 15.7 146 94-250 209-355 (382)
100 2as0_A Hypothetical protein PH 99.6 4.8E-15 1.6E-19 133.4 15.5 126 91-224 214-340 (396)
101 3thr_A Glycine N-methyltransfe 99.6 2.3E-15 7.9E-20 129.6 12.8 118 93-220 56-176 (293)
102 3c0k_A UPF0064 protein YCCW; P 99.6 2E-14 6.8E-19 129.4 19.5 148 93-249 219-368 (396)
103 3g07_A 7SK snRNA methylphospha 99.6 1.1E-15 3.9E-20 132.0 10.8 114 93-219 45-220 (292)
104 1jsx_A Glucose-inhibited divis 99.6 6.9E-15 2.4E-19 120.1 14.9 102 94-220 65-166 (207)
105 3hnr_A Probable methyltransfer 99.6 3.4E-15 1.2E-19 123.0 13.1 103 92-221 43-147 (220)
106 3ntv_A MW1564 protein; rossman 99.6 4.5E-15 1.5E-19 123.9 14.0 106 92-218 69-175 (232)
107 1ri5_A MRNA capping enzyme; me 99.6 5E-15 1.7E-19 127.4 14.7 113 89-220 59-175 (298)
108 2yqz_A Hypothetical protein TT 99.6 2.9E-15 9.8E-20 126.6 12.8 105 91-218 36-140 (263)
109 3g2m_A PCZA361.24; SAM-depende 99.6 4.1E-15 1.4E-19 128.7 13.8 120 83-221 71-192 (299)
110 2esr_A Methyltransferase; stru 99.6 5.8E-15 2E-19 117.7 13.6 111 92-222 29-141 (177)
111 3tr6_A O-methyltransferase; ce 99.6 2.5E-15 8.7E-20 124.4 11.6 111 92-220 62-175 (225)
112 3jwg_A HEN1, methyltransferase 99.6 3.8E-15 1.3E-19 122.9 12.4 112 93-220 28-142 (219)
113 3kr9_A SAM-dependent methyltra 99.6 1.8E-14 6E-19 119.5 16.3 134 90-255 11-145 (225)
114 2vdv_E TRNA (guanine-N(7)-)-me 99.6 4.1E-15 1.4E-19 125.2 12.7 119 91-219 46-173 (246)
115 1o54_A SAM-dependent O-methylt 99.6 6.3E-15 2.2E-19 126.2 13.9 107 90-220 108-214 (277)
116 3mq2_A 16S rRNA methyltransfer 99.6 5.3E-15 1.8E-19 121.9 12.8 151 91-255 24-186 (218)
117 2vdw_A Vaccinia virus capping 99.6 4.3E-15 1.5E-19 129.0 12.6 115 94-220 48-170 (302)
118 2p35_A Trans-aconitate 2-methy 99.6 5.7E-15 1.9E-19 124.6 12.8 105 91-221 30-134 (259)
119 3m70_A Tellurite resistance pr 99.6 6.9E-15 2.4E-19 126.3 13.6 106 93-222 119-226 (286)
120 2aot_A HMT, histamine N-methyl 99.6 2.8E-15 9.5E-20 129.4 11.1 117 93-221 51-174 (292)
121 3ckk_A TRNA (guanine-N(7)-)-me 99.6 3.9E-15 1.3E-19 124.8 11.5 121 92-220 44-169 (235)
122 3q87_B N6 adenine specific DNA 99.6 3.8E-14 1.3E-18 112.7 16.7 128 93-253 22-149 (170)
123 3bt7_A TRNA (uracil-5-)-methyl 99.6 2.6E-14 8.7E-19 127.5 17.4 127 95-255 214-353 (369)
124 2gpy_A O-methyltransferase; st 99.6 1.9E-14 6.6E-19 119.9 15.6 109 92-219 52-160 (233)
125 2fpo_A Methylase YHHF; structu 99.6 7.8E-15 2.7E-19 120.0 12.9 107 94-221 54-162 (202)
126 3cgg_A SAM-dependent methyltra 99.6 1.4E-14 4.7E-19 116.5 14.2 135 87-251 39-173 (195)
127 2fhp_A Methylase, putative; al 99.6 5.6E-15 1.9E-19 118.5 11.8 111 93-221 43-156 (187)
128 3lec_A NADB-rossmann superfami 99.6 4E-14 1.4E-18 117.6 16.9 134 90-255 17-151 (230)
129 2i62_A Nicotinamide N-methyltr 99.6 2.3E-14 7.7E-19 121.2 15.7 146 92-254 54-240 (265)
130 2p8j_A S-adenosylmethionine-de 99.6 6.4E-15 2.2E-19 120.3 11.9 109 91-221 20-130 (209)
131 3gnl_A Uncharacterized protein 99.6 3E-14 1E-18 119.3 15.7 135 89-255 16-151 (244)
132 1uwv_A 23S rRNA (uracil-5-)-me 99.6 2.7E-14 9.2E-19 130.0 16.7 132 92-255 284-416 (433)
133 2pxx_A Uncharacterized protein 99.6 8.1E-15 2.8E-19 119.9 11.9 122 85-220 33-160 (215)
134 3c3p_A Methyltransferase; NP_9 99.6 1.4E-14 4.8E-19 118.8 13.4 106 93-219 55-160 (210)
135 3bkx_A SAM-dependent methyltra 99.6 2.8E-14 9.6E-19 121.6 15.4 117 91-223 40-163 (275)
136 2hnk_A SAM-dependent O-methylt 99.6 3.1E-14 1.1E-18 119.2 15.4 110 92-219 58-181 (239)
137 3ggd_A SAM-dependent methyltra 99.6 3.2E-15 1.1E-19 125.4 9.3 109 91-221 53-165 (245)
138 3bgv_A MRNA CAP guanine-N7 met 99.6 2.1E-14 7.3E-19 125.0 14.8 115 92-220 32-156 (313)
139 3m6w_A RRNA methylase; rRNA me 99.6 1.6E-14 5.6E-19 131.8 14.5 138 91-240 98-248 (464)
140 3bkw_A MLL3908 protein, S-aden 99.6 9.7E-15 3.3E-19 121.9 11.9 104 93-220 42-145 (243)
141 1wzn_A SAM-dependent methyltra 99.6 2.7E-14 9.2E-19 120.1 14.7 107 92-219 39-145 (252)
142 3dli_A Methyltransferase; PSI- 99.6 8.1E-15 2.8E-19 122.7 11.2 103 91-221 38-142 (240)
143 3k6r_A Putative transferase PH 99.6 9.8E-15 3.3E-19 124.9 11.8 152 62-240 95-247 (278)
144 3cbg_A O-methyltransferase; cy 99.6 4.4E-14 1.5E-18 117.9 15.5 138 93-248 71-218 (232)
145 1sui_A Caffeoyl-COA O-methyltr 99.6 1.1E-14 3.9E-19 122.8 12.0 110 92-219 77-190 (247)
146 2g72_A Phenylethanolamine N-me 99.6 7.9E-15 2.7E-19 126.2 11.3 113 94-220 71-216 (289)
147 1o9g_A RRNA methyltransferase; 99.6 7.9E-15 2.7E-19 123.7 11.0 120 94-220 51-215 (250)
148 3uwp_A Histone-lysine N-methyl 99.6 8.4E-15 2.9E-19 130.6 11.5 124 81-222 159-291 (438)
149 1i9g_A Hypothetical protein RV 99.6 9.7E-14 3.3E-18 118.7 17.8 109 90-220 95-204 (280)
150 2yxe_A Protein-L-isoaspartate 99.6 1.9E-14 6.5E-19 118.3 12.8 106 91-221 74-179 (215)
151 3iv6_A Putative Zn-dependent a 99.6 8E-15 2.7E-19 124.5 10.6 108 91-222 42-151 (261)
152 3m4x_A NOL1/NOP2/SUN family pr 99.6 4.7E-14 1.6E-18 128.6 16.1 140 91-241 102-254 (456)
153 3pfg_A N-methyltransferase; N, 99.6 1.7E-14 5.7E-19 122.3 12.2 106 87-219 43-151 (263)
154 3c3y_A Pfomt, O-methyltransfer 99.6 3E-14 1E-18 119.4 13.6 110 92-219 68-181 (237)
155 1qzz_A RDMB, aclacinomycin-10- 99.6 1.1E-13 3.8E-18 123.2 17.8 141 92-254 180-340 (374)
156 2frx_A Hypothetical protein YE 99.6 8.2E-14 2.8E-18 128.0 17.2 137 94-241 117-266 (479)
157 3opn_A Putative hemolysin; str 99.6 2.4E-15 8.2E-20 125.8 6.1 148 94-266 37-201 (232)
158 1i1n_A Protein-L-isoaspartate 99.6 1.9E-14 6.5E-19 119.3 11.5 110 91-221 74-184 (226)
159 3ccf_A Cyclopropane-fatty-acyl 99.6 2E-14 6.8E-19 123.1 11.8 102 92-221 55-156 (279)
160 2avd_A Catechol-O-methyltransf 99.6 2.9E-14 9.8E-19 118.3 12.3 111 92-220 67-180 (229)
161 2yvl_A TRMI protein, hypotheti 99.6 1.2E-13 4E-18 115.8 16.0 105 90-220 87-191 (248)
162 1jg1_A PIMT;, protein-L-isoasp 99.6 1.9E-14 6.4E-19 120.3 11.1 104 91-221 88-191 (235)
163 3d2l_A SAM-dependent methyltra 99.6 4.8E-14 1.6E-18 117.7 13.5 109 90-219 29-137 (243)
164 3bwc_A Spermidine synthase; SA 99.6 7.4E-14 2.5E-18 121.3 15.1 118 93-220 94-211 (304)
165 2jjq_A Uncharacterized RNA met 99.6 1.4E-13 4.6E-18 124.9 17.3 124 92-255 288-411 (425)
166 2yxl_A PH0851 protein, 450AA l 99.6 9.9E-14 3.4E-18 126.8 16.5 141 91-241 256-409 (450)
167 3hp7_A Hemolysin, putative; st 99.6 6.1E-14 2.1E-18 120.5 14.2 159 82-266 72-249 (291)
168 2gs9_A Hypothetical protein TT 99.6 3.5E-14 1.2E-18 116.3 12.0 109 85-222 27-135 (211)
169 2pbf_A Protein-L-isoaspartate 99.5 2.3E-14 7.9E-19 118.8 10.3 116 91-221 77-195 (227)
170 2yx1_A Hypothetical protein MJ 99.5 1.5E-13 5E-18 121.1 16.0 105 90-223 191-295 (336)
171 1dl5_A Protein-L-isoaspartate 99.5 5.7E-14 1.9E-18 122.7 13.1 106 91-221 72-177 (317)
172 2b25_A Hypothetical protein; s 99.5 4.7E-14 1.6E-18 124.1 12.6 112 91-220 102-220 (336)
173 3gdh_A Trimethylguanosine synt 99.5 1.5E-15 5E-20 127.3 2.8 104 93-218 77-180 (241)
174 3m33_A Uncharacterized protein 99.5 1.2E-14 4.1E-19 120.8 8.2 103 82-216 36-139 (226)
175 1u2z_A Histone-lysine N-methyl 99.5 3.2E-14 1.1E-18 128.7 11.6 114 90-220 238-360 (433)
176 3mcz_A O-methyltransferase; ad 99.5 3.4E-13 1.2E-17 119.2 18.0 112 92-222 176-290 (352)
177 3q7e_A Protein arginine N-meth 99.5 4.2E-14 1.4E-18 125.2 11.9 108 92-217 64-171 (349)
178 3bzb_A Uncharacterized protein 99.5 3.8E-14 1.3E-18 121.8 11.1 112 92-220 77-206 (281)
179 2r3s_A Uncharacterized protein 99.5 3.5E-13 1.2E-17 118.1 17.6 109 93-222 164-274 (335)
180 2pjd_A Ribosomal RNA small sub 99.5 1.4E-14 4.9E-19 127.9 8.6 111 93-221 195-305 (343)
181 2fyt_A Protein arginine N-meth 99.5 6.2E-14 2.1E-18 123.7 12.5 106 92-216 62-168 (340)
182 3ege_A Putative methyltransfer 99.5 2.8E-14 9.5E-19 121.1 9.8 101 92-221 32-132 (261)
183 2h00_A Methyltransferase 10 do 99.5 1.1E-14 3.7E-19 123.0 7.2 87 94-187 65-154 (254)
184 3i53_A O-methyltransferase; CO 99.5 2E-13 7E-18 119.8 15.6 140 93-254 168-322 (332)
185 1sqg_A SUN protein, FMU protei 99.5 2.7E-13 9.1E-18 123.3 16.8 139 91-241 243-394 (429)
186 2avn_A Ubiquinone/menaquinone 99.5 5.6E-14 1.9E-18 119.1 11.4 110 85-221 45-154 (260)
187 1x19_A CRTF-related protein; m 99.5 1.4E-13 4.8E-18 122.1 14.5 108 92-221 188-297 (359)
188 3dp7_A SAM-dependent methyltra 99.5 1.6E-13 5.4E-18 122.1 14.4 112 93-223 178-291 (363)
189 3adn_A Spermidine synthase; am 99.5 1.9E-13 6.6E-18 118.1 14.4 117 93-220 82-199 (294)
190 4e2x_A TCAB9; kijanose, tetron 99.5 1.2E-13 3.9E-18 125.0 13.5 105 92-220 105-209 (416)
191 1r18_A Protein-L-isoaspartate( 99.5 4.9E-14 1.7E-18 117.0 10.1 112 91-220 81-195 (227)
192 3bxo_A N,N-dimethyltransferase 99.5 1.1E-13 3.6E-18 115.3 12.1 108 87-221 33-143 (239)
193 2qe6_A Uncharacterized protein 99.5 2.8E-13 9.4E-18 116.0 14.7 109 94-222 77-199 (274)
194 3gwz_A MMCR; methyltransferase 99.5 1E-12 3.4E-17 117.1 18.8 139 92-252 200-355 (369)
195 2b9e_A NOL1/NOP2/SUN domain fa 99.5 3.6E-13 1.2E-17 117.1 15.5 141 91-241 99-254 (309)
196 3v97_A Ribosomal RNA large sub 99.5 1.5E-13 5.1E-18 131.8 13.8 119 93-221 538-659 (703)
197 3r0q_C Probable protein argini 99.5 8.3E-14 2.9E-18 124.5 10.8 108 92-219 61-169 (376)
198 1xj5_A Spermidine synthase 1; 99.5 6.2E-13 2.1E-17 116.9 15.4 117 92-220 118-236 (334)
199 1vbf_A 231AA long hypothetical 99.5 3.3E-13 1.1E-17 112.0 12.9 101 91-221 67-167 (231)
200 1tw3_A COMT, carminomycin 4-O- 99.5 8.6E-13 2.9E-17 116.9 16.1 142 92-255 181-341 (360)
201 1inl_A Spermidine synthase; be 99.5 6.4E-13 2.2E-17 115.0 14.9 117 93-220 89-206 (296)
202 2ip2_A Probable phenazine-spec 99.5 1E-12 3.5E-17 115.3 16.4 139 92-253 166-322 (334)
203 3gjy_A Spermidine synthase; AP 99.5 3.4E-13 1.2E-17 117.1 12.6 112 96-221 91-202 (317)
204 3tm4_A TRNA (guanine N2-)-meth 99.5 2.4E-12 8.3E-17 114.9 18.1 139 92-254 215-353 (373)
205 1mjf_A Spermidine synthase; sp 99.5 1.4E-12 5E-17 111.9 15.6 113 92-220 73-194 (281)
206 1g6q_1 HnRNP arginine N-methyl 99.5 3.1E-13 1.1E-17 118.6 11.5 108 92-217 36-143 (328)
207 3cc8_A Putative methyltransfer 99.5 4.1E-13 1.4E-17 110.7 11.4 102 93-221 31-132 (230)
208 1uir_A Polyamine aminopropyltr 99.5 1.3E-12 4.5E-17 114.0 15.1 121 92-220 75-196 (314)
209 4hc4_A Protein arginine N-meth 99.5 2.9E-13 1E-17 120.4 11.0 106 93-217 82-187 (376)
210 2i7c_A Spermidine synthase; tr 99.5 1.5E-12 5.2E-17 111.9 15.2 116 92-220 76-193 (283)
211 1p91_A Ribosomal RNA large sub 99.5 4.5E-13 1.6E-17 113.8 11.7 97 93-221 84-180 (269)
212 2pt6_A Spermidine synthase; tr 99.5 1.5E-12 5.3E-17 113.8 15.2 116 93-220 115-231 (321)
213 1iy9_A Spermidine synthase; ro 99.5 8.5E-13 2.9E-17 113.0 13.2 117 93-220 74-190 (275)
214 2y1w_A Histone-arginine methyl 99.4 5.1E-13 1.8E-17 118.2 12.0 108 92-219 48-155 (348)
215 2o07_A Spermidine synthase; st 99.4 1.9E-12 6.6E-17 112.4 15.2 115 93-220 94-210 (304)
216 3htx_A HEN1; HEN1, small RNA m 99.4 1.2E-12 4.2E-17 124.9 14.8 113 92-220 719-835 (950)
217 2dul_A N(2),N(2)-dimethylguano 99.4 2.5E-12 8.7E-17 114.8 16.2 103 94-219 47-164 (378)
218 2bm8_A Cephalosporin hydroxyla 99.4 1.3E-13 4.5E-18 115.5 7.3 128 94-248 81-214 (236)
219 1vlm_A SAM-dependent methyltra 99.4 1.4E-12 4.8E-17 107.5 13.3 95 94-221 47-141 (219)
220 2b2c_A Spermidine synthase; be 99.4 1.5E-12 5.2E-17 113.5 14.1 116 92-219 106-222 (314)
221 3lst_A CALO1 methyltransferase 99.4 1E-12 3.6E-17 116.1 13.3 136 92-252 182-335 (348)
222 3dou_A Ribosomal RNA large sub 99.4 4E-13 1.4E-17 108.9 9.6 110 92-222 23-142 (191)
223 3giw_A Protein of unknown func 99.4 9.6E-13 3.3E-17 111.8 12.1 110 96-222 80-203 (277)
224 1wy7_A Hypothetical protein PH 99.4 4.5E-12 1.6E-16 103.3 15.5 102 92-219 47-148 (207)
225 2qm3_A Predicted methyltransfe 99.4 3.7E-12 1.3E-16 113.6 16.1 107 93-220 171-279 (373)
226 2f8l_A Hypothetical protein LM 99.4 2.1E-12 7.2E-17 114.0 13.6 136 93-238 129-274 (344)
227 1ej0_A FTSJ; methyltransferase 99.4 1.4E-12 4.7E-17 102.9 10.9 111 92-221 20-138 (180)
228 3sso_A Methyltransferase; macr 99.4 6.1E-13 2.1E-17 118.3 9.6 114 82-221 204-326 (419)
229 2plw_A Ribosomal RNA methyltra 99.4 2.4E-12 8.2E-17 104.4 11.5 112 92-221 20-156 (201)
230 3b3j_A Histone-arginine methyl 99.4 1.7E-12 5.8E-17 119.4 11.5 106 92-218 156-262 (480)
231 4azs_A Methyltransferase WBDD; 99.4 9.9E-13 3.4E-17 123.6 10.1 111 92-222 64-176 (569)
232 4a6d_A Hydroxyindole O-methylt 99.4 6.8E-12 2.3E-16 111.1 14.8 139 92-253 177-334 (353)
233 3axs_A Probable N(2),N(2)-dime 99.4 2.2E-12 7.4E-17 115.4 11.0 107 93-220 51-159 (392)
234 1ne2_A Hypothetical protein TA 99.4 9.6E-12 3.3E-16 101.0 13.4 99 92-220 49-147 (200)
235 3reo_A (ISO)eugenol O-methyltr 99.4 7.8E-12 2.7E-16 111.4 13.4 133 92-254 201-356 (368)
236 2oxt_A Nucleoside-2'-O-methylt 99.4 6.4E-13 2.2E-17 113.1 6.0 112 90-221 70-187 (265)
237 1af7_A Chemotaxis receptor met 99.4 4.4E-12 1.5E-16 108.4 11.1 112 94-217 105-250 (274)
238 2nyu_A Putative ribosomal RNA 99.4 6.1E-12 2.1E-16 101.5 11.5 110 92-221 20-147 (196)
239 2wa2_A Non-structural protein 99.3 5.9E-13 2E-17 114.0 5.5 112 90-221 78-195 (276)
240 2ih2_A Modification methylase 99.3 1.7E-11 5.8E-16 110.7 14.9 126 93-239 38-183 (421)
241 3frh_A 16S rRNA methylase; met 99.3 3.1E-11 1.1E-15 100.1 14.6 144 93-266 104-251 (253)
242 3lcv_B Sisomicin-gentamicin re 99.3 3.7E-12 1.3E-16 106.7 9.1 147 92-266 130-281 (281)
243 2zfu_A Nucleomethylin, cerebra 99.3 2.9E-12 9.9E-17 105.1 8.1 114 92-252 65-178 (215)
244 1zq9_A Probable dimethyladenos 99.3 5.9E-12 2E-16 108.3 10.2 79 91-183 25-103 (285)
245 2cmg_A Spermidine synthase; tr 99.3 4.6E-12 1.6E-16 107.6 9.1 102 93-220 71-172 (262)
246 2p41_A Type II methyltransfera 99.3 5.3E-12 1.8E-16 109.6 9.4 108 90-220 78-192 (305)
247 2qfm_A Spermine synthase; sper 99.3 2.9E-11 9.8E-16 106.4 13.7 124 94-222 188-317 (364)
248 3p9c_A Caffeic acid O-methyltr 99.3 2.6E-11 8.8E-16 107.8 13.3 133 92-254 199-354 (364)
249 1fp1_D Isoliquiritigenin 2'-O- 99.3 7.6E-12 2.6E-16 111.5 9.6 100 92-221 207-308 (372)
250 3ldu_A Putative methylase; str 99.3 5E-11 1.7E-15 106.7 13.4 118 91-220 192-345 (385)
251 1fp2_A Isoflavone O-methyltran 99.3 1.4E-11 4.7E-16 109.0 8.9 101 92-222 186-291 (352)
252 3ldg_A Putative uncharacterize 99.2 1.3E-10 4.5E-15 103.8 15.0 119 90-220 190-344 (384)
253 2okc_A Type I restriction enzy 99.2 3.1E-11 1E-15 110.2 11.1 124 92-222 169-310 (445)
254 3k0b_A Predicted N6-adenine-sp 99.2 8.4E-11 2.9E-15 105.5 13.7 118 91-220 198-351 (393)
255 2xyq_A Putative 2'-O-methyl tr 99.2 7.6E-11 2.6E-15 101.3 12.7 105 91-221 60-173 (290)
256 2h1r_A Dimethyladenosine trans 99.2 2.2E-11 7.7E-16 105.4 9.4 78 91-183 39-116 (299)
257 1yub_A Ermam, rRNA methyltrans 99.2 9.2E-13 3.1E-17 110.8 0.1 112 91-218 26-144 (245)
258 3tqs_A Ribosomal RNA small sub 99.2 1.4E-10 4.6E-15 98.1 13.3 80 91-183 26-106 (255)
259 1m6y_A S-adenosyl-methyltransf 99.2 5.1E-11 1.8E-15 103.0 10.6 84 91-183 23-108 (301)
260 2r6z_A UPF0341 protein in RSP 99.2 1.7E-11 5.7E-16 104.0 6.8 118 92-220 81-217 (258)
261 3tka_A Ribosomal RNA small sub 99.2 1.8E-10 6E-15 99.8 12.4 82 91-183 54-138 (347)
262 3gru_A Dimethyladenosine trans 99.2 7.2E-11 2.5E-15 101.8 9.9 78 91-183 47-124 (295)
263 1qam_A ERMC' methyltransferase 99.2 4.6E-10 1.6E-14 94.2 13.9 78 91-183 27-104 (244)
264 3ll7_A Putative methyltransfer 99.2 7.2E-11 2.5E-15 105.9 8.6 84 91-185 90-175 (410)
265 1zg3_A Isoflavanone 4'-O-methy 99.1 7.5E-11 2.6E-15 104.4 8.2 101 92-222 191-296 (358)
266 3v97_A Ribosomal RNA large sub 99.1 7.6E-10 2.6E-14 106.2 15.8 124 91-220 187-348 (703)
267 3lkd_A Type I restriction-modi 99.1 6.8E-10 2.3E-14 103.3 14.7 127 93-222 220-361 (542)
268 2ar0_A M.ecoki, type I restric 99.1 4.2E-10 1.4E-14 104.9 13.3 125 92-222 167-315 (541)
269 2oyr_A UPF0341 protein YHIQ; a 99.1 9.6E-11 3.3E-15 99.1 7.9 84 92-183 84-174 (258)
270 2ld4_A Anamorsin; methyltransf 99.1 3.4E-11 1.2E-15 95.7 4.7 95 89-220 7-102 (176)
271 3fut_A Dimethyladenosine trans 99.1 3.7E-10 1.3E-14 96.2 9.6 77 91-183 44-120 (271)
272 3cvo_A Methyltransferase-like 99.1 7.3E-10 2.5E-14 90.1 10.8 103 91-217 27-152 (202)
273 3s1s_A Restriction endonucleas 99.1 1.5E-09 5.2E-14 103.6 14.5 128 92-222 319-468 (878)
274 4fzv_A Putative methyltransfer 99.1 1.3E-09 4.5E-14 96.3 13.1 128 91-224 145-289 (359)
275 3khk_A Type I restriction-modi 99.0 8.1E-10 2.8E-14 102.9 10.4 122 96-222 246-398 (544)
276 3uzu_A Ribosomal RNA small sub 99.0 4.1E-09 1.4E-13 90.1 12.7 83 91-183 39-124 (279)
277 3ftd_A Dimethyladenosine trans 99.0 4.2E-09 1.4E-13 88.6 11.2 78 91-183 28-105 (249)
278 1qyr_A KSGA, high level kasuga 98.9 9E-10 3.1E-14 92.9 6.5 81 91-183 18-100 (252)
279 2wk1_A NOVP; transferase, O-me 98.9 4.8E-08 1.6E-12 83.4 15.5 130 94-241 106-263 (282)
280 3evf_A RNA-directed RNA polyme 98.9 7E-09 2.4E-13 87.4 8.8 115 90-220 70-185 (277)
281 3o4f_A Spermidine synthase; am 98.9 1.6E-07 5.5E-12 80.4 17.2 117 93-220 82-199 (294)
282 1wg8_A Predicted S-adenosylmet 98.8 1.2E-08 4.2E-13 86.4 9.5 79 91-183 19-99 (285)
283 4gqb_A Protein arginine N-meth 98.8 1E-08 3.6E-13 96.4 9.5 103 95-216 358-464 (637)
284 4auk_A Ribosomal RNA large sub 98.7 3.1E-07 1.1E-11 80.8 15.9 97 90-216 207-303 (375)
285 2qy6_A UPF0209 protein YFCK; s 98.7 6.2E-08 2.1E-12 81.8 10.9 116 94-216 60-210 (257)
286 3gcz_A Polyprotein; flavivirus 98.7 1.1E-08 3.7E-13 86.3 5.6 115 91-221 87-203 (282)
287 3ua3_A Protein arginine N-meth 98.7 3.2E-08 1.1E-12 93.3 9.0 107 95-216 410-531 (745)
288 3ufb_A Type I restriction-modi 98.6 3.2E-07 1.1E-11 85.2 12.3 127 92-222 215-365 (530)
289 3c6k_A Spermine synthase; sper 98.6 7.3E-07 2.5E-11 78.7 13.2 122 94-220 205-332 (381)
290 2px2_A Genome polyprotein [con 98.6 2.1E-07 7.1E-12 77.4 9.1 112 91-221 70-185 (269)
291 3p8z_A Mtase, non-structural p 98.6 2.6E-07 8.9E-12 75.7 9.3 131 90-240 74-205 (267)
292 3eld_A Methyltransferase; flav 98.5 2.4E-07 8.2E-12 78.6 8.8 141 78-239 68-209 (300)
293 3lkz_A Non-structural protein 98.5 8.2E-07 2.8E-11 75.1 10.5 133 89-240 89-223 (321)
294 2efj_A 3,7-dimethylxanthine me 98.4 4.6E-06 1.6E-10 74.0 13.2 122 95-222 53-228 (384)
295 2zig_A TTHA0409, putative modi 98.3 9.4E-07 3.2E-11 76.1 7.8 60 80-145 221-280 (297)
296 3b5i_A S-adenosyl-L-methionine 98.2 4.8E-06 1.7E-10 73.8 10.1 128 95-222 53-228 (374)
297 1g60_A Adenine-specific methyl 98.1 6.9E-06 2.4E-10 69.3 7.8 61 80-146 198-258 (260)
298 2k4m_A TR8_protein, UPF0146 pr 98.0 4.3E-06 1.5E-10 63.7 4.8 53 79-136 20-73 (153)
299 2oo3_A Protein involved in cat 98.0 9.5E-06 3.2E-10 68.8 6.1 106 94-220 91-199 (283)
300 1m6e_X S-adenosyl-L-methionnin 98.0 1.7E-05 5.9E-10 69.8 7.9 124 95-221 52-211 (359)
301 3r24_A NSP16, 2'-O-methyl tran 98.0 0.00013 4.5E-09 61.7 12.8 107 92-223 107-221 (344)
302 1i4w_A Mitochondrial replicati 97.7 0.0003 1E-08 61.8 11.9 61 94-165 58-118 (353)
303 3tos_A CALS11; methyltransfera 97.6 0.00055 1.9E-08 57.3 10.8 135 92-240 67-237 (257)
304 3g7u_A Cytosine-specific methy 97.6 0.00076 2.6E-08 59.8 12.1 134 96-247 3-145 (376)
305 1f8f_A Benzyl alcohol dehydrog 97.5 0.00042 1.4E-08 61.1 9.8 100 90-220 186-290 (371)
306 1g55_A DNA cytosine methyltran 97.5 0.00062 2.1E-08 59.6 10.7 79 96-187 3-82 (343)
307 4ej6_A Putative zinc-binding d 97.5 0.00065 2.2E-08 59.9 10.7 104 87-220 175-285 (370)
308 3s2e_A Zinc-containing alcohol 97.5 0.00053 1.8E-08 59.7 9.6 101 89-219 161-263 (340)
309 1pl8_A Human sorbitol dehydrog 97.4 0.00058 2E-08 59.9 9.7 100 90-220 167-274 (356)
310 3fpc_A NADP-dependent alcohol 97.4 0.00065 2.2E-08 59.5 9.2 103 87-219 159-266 (352)
311 2h6e_A ADH-4, D-arabinose 1-de 97.4 0.00065 2.2E-08 59.3 8.9 101 91-220 168-270 (344)
312 1uuf_A YAHK, zinc-type alcohol 97.3 0.00068 2.3E-08 59.8 8.8 98 90-219 190-288 (369)
313 2dph_A Formaldehyde dismutase; 97.3 0.00063 2.2E-08 60.6 8.4 112 90-219 181-299 (398)
314 3two_A Mannitol dehydrogenase; 97.3 0.00063 2.2E-08 59.4 8.3 97 87-220 169-266 (348)
315 1boo_A Protein (N-4 cytosine-s 97.3 0.00054 1.8E-08 59.5 7.5 62 79-146 237-298 (323)
316 1e3j_A NADP(H)-dependent ketos 97.3 0.0013 4.4E-08 57.5 9.8 102 89-220 163-272 (352)
317 4a2c_A Galactitol-1-phosphate 97.2 0.0037 1.3E-07 54.3 12.4 105 87-220 153-261 (346)
318 3jv7_A ADH-A; dehydrogenase, n 97.2 0.0013 4.5E-08 57.3 9.3 100 91-220 168-271 (345)
319 1vj0_A Alcohol dehydrogenase, 97.2 0.0015 5E-08 57.9 9.8 101 90-220 190-299 (380)
320 3m6i_A L-arabinitol 4-dehydrog 97.2 0.0016 5.5E-08 57.1 9.9 104 89-220 174-284 (363)
321 2c7p_A Modification methylase 97.2 0.0062 2.1E-07 52.9 13.0 75 95-187 11-85 (327)
322 1eg2_A Modification methylase 97.2 0.00096 3.3E-08 57.8 7.8 63 78-146 226-291 (319)
323 2py6_A Methyltransferase FKBM; 97.2 0.0011 3.8E-08 59.4 8.3 61 92-158 224-288 (409)
324 1pqw_A Polyketide synthase; ro 97.1 0.0011 3.8E-08 52.8 7.3 98 91-220 35-138 (198)
325 1rjw_A ADH-HT, alcohol dehydro 97.1 0.0017 5.7E-08 56.5 9.0 98 89-219 159-261 (339)
326 3uko_A Alcohol dehydrogenase c 97.1 0.0027 9.1E-08 56.1 10.2 100 90-220 189-296 (378)
327 4eez_A Alcohol dehydrogenase 1 97.1 0.0036 1.2E-07 54.4 10.9 104 89-219 158-263 (348)
328 1kol_A Formaldehyde dehydrogen 97.1 0.003 1E-07 56.1 10.2 114 90-220 181-301 (398)
329 3uog_A Alcohol dehydrogenase; 97.1 0.0015 5.1E-08 57.4 8.1 99 90-220 185-288 (363)
330 3vyw_A MNMC2; tRNA wobble urid 97.0 0.0043 1.5E-07 53.2 10.2 113 96-220 98-225 (308)
331 1p0f_A NADP-dependent alcohol 97.0 0.0047 1.6E-07 54.4 10.8 100 90-220 187-294 (373)
332 1cdo_A Alcohol dehydrogenase; 97.0 0.003 1E-07 55.6 9.6 100 90-220 188-295 (374)
333 1e3i_A Alcohol dehydrogenase, 97.0 0.003 1E-07 55.7 9.3 99 90-219 191-297 (376)
334 3jyn_A Quinone oxidoreductase; 97.0 0.0031 1.1E-07 54.4 9.2 98 91-220 137-240 (325)
335 3gms_A Putative NADPH:quinone 96.9 0.0032 1.1E-07 54.7 9.0 99 90-220 140-244 (340)
336 2d8a_A PH0655, probable L-thre 96.9 0.0025 8.6E-08 55.6 8.2 99 90-219 164-267 (348)
337 2fzw_A Alcohol dehydrogenase c 96.9 0.0062 2.1E-07 53.5 10.7 99 90-219 186-292 (373)
338 2jhf_A Alcohol dehydrogenase E 96.9 0.0077 2.6E-07 53.0 11.2 99 90-219 187-293 (374)
339 3qwb_A Probable quinone oxidor 96.8 0.0031 1.1E-07 54.6 8.1 97 91-219 145-247 (334)
340 1piw_A Hypothetical zinc-type 96.8 0.004 1.4E-07 54.6 8.8 101 89-219 174-276 (360)
341 3goh_A Alcohol dehydrogenase, 96.8 0.0025 8.6E-08 54.7 7.4 91 89-218 137-228 (315)
342 1jvb_A NAD(H)-dependent alcoho 96.8 0.0056 1.9E-07 53.3 9.4 101 89-220 165-272 (347)
343 4dvj_A Putative zinc-dependent 96.8 0.0075 2.6E-07 52.9 10.3 94 94-218 171-269 (363)
344 2hcy_A Alcohol dehydrogenase 1 96.8 0.0049 1.7E-07 53.6 8.8 99 89-219 164-269 (347)
345 3ip1_A Alcohol dehydrogenase, 96.7 0.0058 2E-07 54.4 9.2 101 91-220 210-319 (404)
346 4eye_A Probable oxidoreductase 96.7 0.0076 2.6E-07 52.4 9.6 97 90-219 155-257 (342)
347 2b5w_A Glucose dehydrogenase; 96.7 0.0048 1.6E-07 54.0 8.2 102 89-220 161-274 (357)
348 4b7c_A Probable oxidoreductase 96.7 0.004 1.4E-07 53.9 7.5 99 90-220 145-249 (336)
349 1iz0_A Quinone oxidoreductase; 96.7 0.0041 1.4E-07 53.0 7.5 93 92-219 123-218 (302)
350 2dq4_A L-threonine 3-dehydroge 96.6 0.003 1E-07 54.9 6.2 97 90-219 161-262 (343)
351 1v3u_A Leukotriene B4 12- hydr 96.6 0.0035 1.2E-07 54.2 6.6 96 91-219 142-244 (333)
352 4h0n_A DNMT2; SAH binding, tra 96.6 0.02 7E-07 49.7 11.3 79 96-186 4-82 (333)
353 3qv2_A 5-cytosine DNA methyltr 96.5 0.023 8E-07 49.2 11.3 79 95-186 10-89 (327)
354 4dup_A Quinone oxidoreductase; 96.5 0.0048 1.6E-07 53.9 7.0 97 90-219 163-265 (353)
355 2eih_A Alcohol dehydrogenase; 96.5 0.01 3.4E-07 51.6 8.9 97 91-219 163-265 (343)
356 2c0c_A Zinc binding alcohol de 96.5 0.021 7E-07 50.0 10.9 97 91-220 160-262 (362)
357 3tqh_A Quinone oxidoreductase; 96.5 0.016 5.6E-07 49.7 10.0 96 88-218 146-244 (321)
358 3nx4_A Putative oxidoreductase 96.5 0.011 3.7E-07 50.8 8.8 96 92-219 143-241 (324)
359 3fbg_A Putative arginate lyase 96.5 0.012 4.1E-07 51.2 9.1 93 94-218 150-247 (346)
360 2cf5_A Atccad5, CAD, cinnamyl 96.4 0.0066 2.2E-07 53.1 7.3 99 90-220 175-276 (357)
361 3ubt_Y Modification methylase 96.4 0.02 7E-07 49.3 10.0 74 96-186 1-74 (331)
362 2j3h_A NADP-dependent oxidored 96.4 0.0048 1.6E-07 53.6 5.9 98 90-219 151-255 (345)
363 2vz8_A Fatty acid synthase; tr 96.4 0.0015 5E-08 70.8 3.1 108 93-219 1239-1348(2512)
364 3gaz_A Alcohol dehydrogenase s 96.3 0.0095 3.3E-07 51.8 7.5 96 90-219 146-246 (343)
365 3krt_A Crotonyl COA reductase; 96.3 0.015 5.2E-07 52.6 8.9 98 90-219 224-344 (456)
366 2j8z_A Quinone oxidoreductase; 96.3 0.014 4.9E-07 50.9 8.4 99 90-220 158-262 (354)
367 1yqd_A Sinapyl alcohol dehydro 96.3 0.012 4E-07 51.7 7.9 99 89-219 181-282 (366)
368 2vn8_A Reticulon-4-interacting 96.2 0.0098 3.4E-07 52.3 7.2 98 92-219 181-280 (375)
369 1yb5_A Quinone oxidoreductase; 96.2 0.0082 2.8E-07 52.4 6.6 98 90-219 166-269 (351)
370 3pvc_A TRNA 5-methylaminomethy 96.2 0.018 6.1E-07 54.9 9.4 116 95-216 59-208 (689)
371 2zig_A TTHA0409, putative modi 96.2 0.011 3.7E-07 50.5 7.0 69 151-220 19-98 (297)
372 1qor_A Quinone oxidoreductase; 96.1 0.013 4.4E-07 50.4 7.5 98 91-220 137-240 (327)
373 1xa0_A Putative NADPH dependen 96.1 0.017 5.8E-07 49.7 8.2 97 90-219 144-246 (328)
374 1wly_A CAAR, 2-haloacrylate re 96.1 0.016 5.5E-07 50.0 7.7 98 91-220 142-245 (333)
375 1tt7_A YHFP; alcohol dehydroge 96.0 0.02 6.8E-07 49.3 8.2 96 91-219 146-247 (330)
376 2zb4_A Prostaglandin reductase 96.0 0.017 6E-07 50.3 7.5 99 90-220 154-261 (357)
377 1rjd_A PPM1P, carboxy methyl t 95.9 0.26 9E-06 42.6 14.7 115 93-222 96-235 (334)
378 1h2b_A Alcohol dehydrogenase; 95.8 0.044 1.5E-06 47.8 9.6 98 90-220 182-286 (359)
379 3ps9_A TRNA 5-methylaminomethy 95.7 0.06 2.1E-06 51.1 10.7 115 96-216 68-216 (676)
380 2cdc_A Glucose dehydrogenase g 95.7 0.017 5.7E-07 50.7 6.2 94 95-220 181-279 (366)
381 3me5_A Cytosine-specific methy 95.6 0.11 3.6E-06 47.5 11.5 82 95-187 88-183 (482)
382 4a0s_A Octenoyl-COA reductase/ 95.6 0.034 1.1E-06 50.1 8.0 97 90-219 216-336 (447)
383 3gqv_A Enoyl reductase; medium 95.5 0.053 1.8E-06 47.6 8.9 94 93-219 163-263 (371)
384 2qrv_A DNA (cytosine-5)-methyl 95.2 0.17 5.9E-06 43.0 10.8 81 93-186 14-96 (295)
385 1gu7_A Enoyl-[acyl-carrier-pro 95.1 0.072 2.5E-06 46.4 8.2 102 91-219 163-275 (364)
386 1zsy_A Mitochondrial 2-enoyl t 94.8 0.054 1.9E-06 47.2 6.8 97 91-218 164-269 (357)
387 3swr_A DNA (cytosine-5)-methyl 94.8 0.4 1.4E-05 47.5 13.3 78 95-187 540-632 (1002)
388 1boo_A Protein (N-4 cytosine-s 94.7 0.062 2.1E-06 46.3 6.6 68 152-220 13-85 (323)
389 3pi7_A NADH oxidoreductase; gr 94.6 0.05 1.7E-06 47.2 5.9 96 93-219 162-263 (349)
390 4ft4_B DNA (cytosine-5)-methyl 94.3 1.1 3.7E-05 43.3 15.2 48 95-142 212-260 (784)
391 4a27_A Synaptic vesicle membra 94.3 0.1 3.5E-06 45.2 7.2 99 90-220 138-239 (349)
392 3pxx_A Carveol dehydrogenase; 94.2 0.18 6.1E-06 42.1 8.4 118 94-219 9-153 (287)
393 2vhw_A Alanine dehydrogenase; 94.0 0.12 4.2E-06 45.4 7.2 100 94-219 167-268 (377)
394 3fwz_A Inner membrane protein 93.8 0.5 1.7E-05 35.0 9.3 99 95-220 7-106 (140)
395 3grk_A Enoyl-(acyl-carrier-pro 93.7 0.27 9.2E-06 41.4 8.6 119 94-220 30-170 (293)
396 1g60_A Adenine-specific methyl 93.6 0.25 8.7E-06 40.9 8.2 65 154-219 5-74 (260)
397 1wma_A Carbonyl reductase [NAD 93.5 0.21 7.1E-06 41.0 7.5 119 94-219 3-138 (276)
398 3ado_A Lambda-crystallin; L-gu 93.5 0.42 1.4E-05 41.1 9.5 100 95-217 6-121 (319)
399 3c85_A Putative glutathione-re 93.4 1.2 4.2E-05 34.3 11.4 42 95-140 39-81 (183)
400 3ijr_A Oxidoreductase, short c 93.2 0.86 3E-05 38.2 10.9 118 94-219 46-182 (291)
401 1pjc_A Protein (L-alanine dehy 93.0 0.29 9.8E-06 42.8 7.9 101 95-220 167-268 (361)
402 3o26_A Salutaridine reductase; 93.0 0.27 9.1E-06 41.3 7.4 85 94-185 11-103 (311)
403 1ja9_A 4HNR, 1,3,6,8-tetrahydr 92.9 0.25 8.7E-06 40.7 7.1 84 94-185 20-111 (274)
404 2eez_A Alanine dehydrogenase; 92.9 0.29 9.9E-06 42.9 7.7 101 94-219 165-266 (369)
405 3h7a_A Short chain dehydrogena 92.9 0.94 3.2E-05 37.0 10.5 84 94-186 6-96 (252)
406 3p2y_A Alanine dehydrogenase/p 92.6 0.45 1.5E-05 41.9 8.4 42 94-140 183-225 (381)
407 4fs3_A Enoyl-[acyl-carrier-pro 92.5 0.63 2.1E-05 38.3 8.9 120 94-219 5-146 (256)
408 3k31_A Enoyl-(acyl-carrier-pro 92.4 0.35 1.2E-05 40.8 7.4 119 94-220 29-169 (296)
409 4fn4_A Short chain dehydrogena 92.4 0.69 2.4E-05 38.3 9.0 84 94-185 6-96 (254)
410 3oig_A Enoyl-[acyl-carrier-pro 92.4 1.3 4.4E-05 36.3 10.7 121 94-220 6-148 (266)
411 3edm_A Short chain dehydrogena 92.2 0.85 2.9E-05 37.5 9.4 117 94-219 7-143 (259)
412 3o38_A Short chain dehydrogena 92.1 0.84 2.9E-05 37.5 9.3 86 94-186 21-114 (266)
413 3av4_A DNA (cytosine-5)-methyl 92.1 2.3 7.7E-05 43.5 13.8 80 95-187 851-943 (1330)
414 3r3s_A Oxidoreductase; structu 92.1 1.1 3.9E-05 37.5 10.2 118 94-219 48-185 (294)
415 4eso_A Putative oxidoreductase 92.1 0.75 2.6E-05 37.7 8.8 114 94-219 7-138 (255)
416 3rkr_A Short chain oxidoreduct 92.0 1.3 4.3E-05 36.4 10.2 82 94-183 28-116 (262)
417 3tjr_A Short chain dehydrogena 91.9 0.58 2E-05 39.5 8.2 84 94-185 30-120 (301)
418 3ioy_A Short-chain dehydrogena 91.8 1.4 4.7E-05 37.5 10.5 86 94-185 7-99 (319)
419 1eg2_A Modification methylase 91.6 0.43 1.5E-05 41.0 7.1 67 153-220 38-107 (319)
420 4dio_A NAD(P) transhydrogenase 91.5 0.68 2.3E-05 41.1 8.4 42 94-140 189-231 (405)
421 4g81_D Putative hexonate dehyd 91.4 1.2 4.3E-05 36.8 9.5 85 94-186 8-99 (255)
422 2vz8_A Fatty acid synthase; tr 91.4 0.46 1.6E-05 51.8 8.4 102 90-218 1663-1769(2512)
423 2g1u_A Hypothetical protein TM 91.4 0.71 2.4E-05 34.7 7.4 42 93-138 17-58 (155)
424 3ce6_A Adenosylhomocysteinase; 91.3 0.32 1.1E-05 44.4 6.2 89 92-219 271-361 (494)
425 3u5t_A 3-oxoacyl-[acyl-carrier 91.3 0.46 1.6E-05 39.4 6.8 117 94-219 26-161 (267)
426 3ucx_A Short chain dehydrogena 91.3 1.6 5.3E-05 35.9 10.0 83 94-184 10-99 (264)
427 3llv_A Exopolyphosphatase-rela 91.2 2.2 7.5E-05 31.2 9.9 72 95-181 6-78 (141)
428 1f0y_A HCDH, L-3-hydroxyacyl-C 91.2 0.71 2.4E-05 39.0 8.0 41 96-142 16-58 (302)
429 3e9n_A Putative short-chain de 91.1 1.6 5.3E-05 35.3 9.8 77 95-185 5-87 (245)
430 3is3_A 17BETA-hydroxysteroid d 91.1 1.1 3.7E-05 37.0 8.9 118 94-220 17-153 (270)
431 2dpo_A L-gulonate 3-dehydrogen 91.0 1.5 5E-05 37.6 9.8 98 96-216 7-120 (319)
432 3nyw_A Putative oxidoreductase 91.0 1.7 6E-05 35.3 10.0 88 94-186 6-100 (250)
433 3v2g_A 3-oxoacyl-[acyl-carrier 91.0 0.8 2.7E-05 38.0 8.0 117 94-219 30-165 (271)
434 3t7c_A Carveol dehydrogenase; 90.9 1 3.5E-05 37.9 8.7 85 94-186 27-130 (299)
435 3sx2_A Putative 3-ketoacyl-(ac 90.8 0.54 1.9E-05 39.0 6.8 85 94-186 12-115 (278)
436 3f1l_A Uncharacterized oxidore 90.8 2.5 8.4E-05 34.4 10.7 84 94-184 11-103 (252)
437 4dkj_A Cytosine-specific methy 90.7 1.4 4.7E-05 39.2 9.6 46 96-144 11-60 (403)
438 1lss_A TRK system potassium up 90.7 2.4 8.1E-05 30.6 9.6 41 95-139 4-44 (140)
439 3tfo_A Putative 3-oxoacyl-(acy 90.7 0.66 2.3E-05 38.4 7.2 84 95-186 4-94 (264)
440 1yb1_A 17-beta-hydroxysteroid 90.6 1.1 3.7E-05 37.0 8.5 84 94-185 30-120 (272)
441 1l7d_A Nicotinamide nucleotide 90.5 0.45 1.6E-05 41.9 6.3 42 94-140 171-213 (384)
442 3uve_A Carveol dehydrogenase ( 90.4 1.5 5.1E-05 36.4 9.2 85 94-186 10-117 (286)
443 4dry_A 3-oxoacyl-[acyl-carrier 90.4 1.2 4.1E-05 37.1 8.6 84 94-184 32-122 (281)
444 3ggo_A Prephenate dehydrogenas 90.4 1.6 5.4E-05 37.2 9.4 88 96-215 34-124 (314)
445 4fgs_A Probable dehydrogenase 90.3 1.3 4.6E-05 37.0 8.8 147 94-252 28-203 (273)
446 3lyl_A 3-oxoacyl-(acyl-carrier 90.3 2 6.9E-05 34.6 9.7 84 95-186 5-95 (247)
447 4e12_A Diketoreductase; oxidor 90.2 1 3.5E-05 37.6 8.0 99 96-215 5-117 (283)
448 2zat_A Dehydrogenase/reductase 90.1 2.1 7.2E-05 34.9 9.8 83 94-184 13-102 (260)
449 3svt_A Short-chain type dehydr 90.1 3 0.0001 34.4 10.9 85 94-183 10-101 (281)
450 4f6c_A AUSA reductase domain p 90.0 2 6.9E-05 37.8 10.2 87 95-185 69-162 (427)
451 2uyo_A Hypothetical protein ML 90.0 5.6 0.00019 33.8 12.5 110 96-221 104-220 (310)
452 3slk_A Polyketide synthase ext 89.9 0.14 4.8E-06 49.7 2.6 95 91-219 342-442 (795)
453 3pk0_A Short-chain dehydrogena 89.9 1.3 4.5E-05 36.3 8.3 86 94-186 9-101 (262)
454 3t4x_A Oxidoreductase, short c 89.8 1.9 6.5E-05 35.4 9.3 86 94-185 9-97 (267)
455 4dcm_A Ribosomal RNA large sub 89.7 2.5 8.6E-05 36.9 10.4 102 94-222 38-139 (375)
456 3lf2_A Short chain oxidoreduct 89.7 1.1 3.8E-05 36.8 7.8 86 94-185 7-99 (265)
457 3ftp_A 3-oxoacyl-[acyl-carrier 89.7 0.69 2.4E-05 38.4 6.5 84 94-185 27-117 (270)
458 3ksu_A 3-oxoacyl-acyl carrier 89.7 1.6 5.4E-05 35.9 8.7 117 94-219 10-147 (262)
459 1g0o_A Trihydroxynaphthalene r 89.5 1.3 4.5E-05 36.7 8.1 117 94-219 28-163 (283)
460 3ek2_A Enoyl-(acyl-carrier-pro 89.4 1.2 4E-05 36.5 7.7 118 94-219 13-153 (271)
461 2jah_A Clavulanic acid dehydro 89.4 0.81 2.8E-05 37.2 6.6 83 95-185 7-96 (247)
462 3gaf_A 7-alpha-hydroxysteroid 89.4 1.5 5.1E-05 35.9 8.3 85 94-186 11-102 (256)
463 3l77_A Short-chain alcohol deh 89.3 1.6 5.5E-05 34.9 8.3 84 95-185 2-92 (235)
464 1iy8_A Levodione reductase; ox 89.2 2.3 8E-05 34.8 9.4 86 94-185 12-104 (267)
465 3r1i_A Short-chain type dehydr 89.1 0.97 3.3E-05 37.6 7.0 85 94-186 31-122 (276)
466 1fmc_A 7 alpha-hydroxysteroid 89.1 1.3 4.4E-05 35.9 7.6 84 94-185 10-100 (255)
467 2h7i_A Enoyl-[acyl-carrier-pro 89.0 0.3 1E-05 40.4 3.8 116 94-219 6-148 (269)
468 1xhl_A Short-chain dehydrogena 89.0 1.3 4.5E-05 37.2 7.9 87 94-185 25-118 (297)
469 4da9_A Short-chain dehydrogena 89.0 1.8 6.2E-05 35.9 8.6 82 94-183 28-117 (280)
470 2ae2_A Protein (tropinone redu 88.8 1.8 6E-05 35.4 8.3 84 94-185 8-99 (260)
471 3pgx_A Carveol dehydrogenase; 88.8 1.2 4.1E-05 36.9 7.4 84 94-185 14-117 (280)
472 3oec_A Carveol dehydrogenase ( 88.7 1.6 5.4E-05 37.1 8.2 84 94-185 45-147 (317)
473 1ae1_A Tropinone reductase-I; 88.6 1.3 4.4E-05 36.6 7.4 84 94-185 20-111 (273)
474 1geg_A Acetoin reductase; SDR 88.4 1.3 4.6E-05 36.1 7.3 83 95-185 2-91 (256)
475 2wyu_A Enoyl-[acyl carrier pro 88.4 0.55 1.9E-05 38.6 4.9 84 94-185 7-98 (261)
476 3ic5_A Putative saccharopine d 88.2 0.77 2.6E-05 32.2 5.0 69 95-181 5-77 (118)
477 2pd4_A Enoyl-[acyl-carrier-pro 88.2 1.5 5.2E-05 36.2 7.6 118 94-219 5-144 (275)
478 2rhc_B Actinorhodin polyketide 88.2 1.8 6.1E-05 35.9 8.0 84 94-185 21-111 (277)
479 3l9w_A Glutathione-regulated p 88.0 2.8 9.5E-05 37.2 9.5 99 95-220 4-103 (413)
480 3tsc_A Putative oxidoreductase 88.0 2.6 8.7E-05 34.8 8.9 85 94-186 10-114 (277)
481 3imf_A Short chain dehydrogena 88.0 2.6 9E-05 34.3 8.9 83 95-185 6-95 (257)
482 3f9i_A 3-oxoacyl-[acyl-carrier 87.9 1.7 5.9E-05 35.1 7.6 82 93-185 12-96 (249)
483 1qsg_A Enoyl-[acyl-carrier-pro 87.6 1.5 5E-05 36.0 7.1 118 94-219 8-148 (265)
484 3v8b_A Putative dehydrogenase, 87.5 1.8 6.2E-05 36.0 7.7 83 94-184 27-116 (283)
485 3cxt_A Dehydrogenase with diff 87.5 1.1 3.7E-05 37.6 6.3 84 94-185 33-123 (291)
486 1vl8_A Gluconate 5-dehydrogena 87.4 2 6.8E-05 35.4 7.8 84 94-185 20-111 (267)
487 3ai3_A NADPH-sorbose reductase 87.4 1.6 5.6E-05 35.6 7.3 83 95-185 7-97 (263)
488 4ibo_A Gluconate dehydrogenase 87.3 3.3 0.00011 34.1 9.1 85 94-186 25-116 (271)
489 4egf_A L-xylulose reductase; s 87.2 1.6 5.5E-05 35.9 7.2 85 94-185 19-110 (266)
490 1zkd_A DUF185; NESG, RPR58, st 87.2 1.8 6E-05 38.2 7.6 48 96-144 82-133 (387)
491 1xkq_A Short-chain reductase f 87.2 1.6 5.5E-05 36.1 7.2 86 95-185 6-98 (280)
492 2x9g_A PTR1, pteridine reducta 87.2 3.3 0.00011 34.3 9.2 84 94-185 22-118 (288)
493 1gee_A Glucose 1-dehydrogenase 87.1 0.97 3.3E-05 36.8 5.7 83 95-185 7-97 (261)
494 3gvc_A Oxidoreductase, probabl 87.1 1.5 5.2E-05 36.4 6.9 81 94-185 28-115 (277)
495 3tox_A Short chain dehydrogena 86.9 1.3 4.5E-05 36.9 6.5 83 94-184 7-96 (280)
496 1zcj_A Peroxisomal bifunctiona 86.9 4.2 0.00014 36.6 10.2 97 96-216 38-147 (463)
497 4imr_A 3-oxoacyl-(acyl-carrier 86.9 1.5 5.1E-05 36.4 6.8 84 94-185 32-121 (275)
498 3pqe_A L-LDH, L-lactate dehydr 86.9 6.4 0.00022 33.7 10.9 113 94-220 4-123 (326)
499 2y0c_A BCEC, UDP-glucose dehyd 86.6 4.1 0.00014 36.9 10.0 108 94-216 7-125 (478)
500 4f6l_B AUSA reductase domain p 86.4 5.5 0.00019 35.9 10.9 86 95-184 150-242 (508)
No 1
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.96 E-value=2e-27 Score=192.09 Aligned_cols=178 Identities=34% Similarity=0.461 Sum_probs=142.8
Q ss_pred hhHHHHhhHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEE
Q 041272 78 TLITIAANGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLF 157 (267)
Q Consensus 78 ~~~~~~~~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~ 157 (267)
.++.+..+.++...++++.+|||+|||+|.++..+++. +.+|+|+|+|++|++.|+++++.++ ..+++++
T Consensus 6 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~------~~~v~~vD~s~~~l~~a~~~~~~~~----~~~v~~~ 75 (185)
T 3mti_A 6 KRPIHMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGL------SKKVYAFDVQEQALGKTSQRLSDLG----IENTELI 75 (185)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTT------SSEEEEEESCHHHHHHHHHHHHHHT----CCCEEEE
T ss_pred HhHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHh------CCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEE
Confidence 45667788888888899999999999999999999987 3799999999999999999999877 4789999
Q ss_pred ecChhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHH
Q 041272 158 NMCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFA 237 (267)
Q Consensus 158 ~~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 237 (267)
+++..++.... +.+||+|++++++++..+..+.+.+.....+++++.++|||||+++++++.++..+.++...+..|+
T Consensus 76 ~~~~~~l~~~~--~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 153 (185)
T 3mti_A 76 LDGHENLDHYV--REPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYV 153 (185)
T ss_dssp ESCGGGGGGTC--CSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHH
T ss_pred eCcHHHHHhhc--cCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 87776665544 3479999999999988777777777888899999999999999999999988888888888999999
Q ss_pred HhCCCCceEEEEEeeecC-CCCceEEEeecC
Q 041272 238 RSLSVDDWICCKFQMLNR-PLAPVLVFLFKR 267 (267)
Q Consensus 238 ~~l~~~~~~~~~~~~~~~-~~~p~~~~~~k~ 267 (267)
+.++...|.+..+.++++ +++|.+++++|+
T Consensus 154 ~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 184 (185)
T 3mti_A 154 IGLDQRVFTAMLYQPLNQINTPPFLVMLEKL 184 (185)
T ss_dssp HHSCTTTEEEEEEEESSCSSCCCEEEEEEEC
T ss_pred HhCCCceEEEEEehhhccCCCCCeEEEEEec
Confidence 999999999999999998 588899998875
No 2
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.95 E-value=9.6e-26 Score=183.91 Aligned_cols=182 Identities=37% Similarity=0.580 Sum_probs=158.1
Q ss_pred hhHHHHhhHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEE
Q 041272 78 TLITIAANGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLF 157 (267)
Q Consensus 78 ~~~~~~~~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~ 157 (267)
.+.....+.+....++++.+|||+|||+|.++..+++.+++ .++|+|+|+++.+++.|+++++.++ ...+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~v~~~ 79 (197)
T 3eey_A 6 KNSLGQSHDYIKMFVKEGDTVVDATCGNGNDTAFLASLVGE---NGRVFGFDIQDKAIANTTKKLTDLN---LIDRVTLI 79 (197)
T ss_dssp CCHHHHHHHHHHHHCCTTCEEEESCCTTSHHHHHHHHHHCT---TCEEEEECSCHHHHHHHHHHHHHTT---CGGGEEEE
T ss_pred hhHHHHHHHHHHhcCCCCCEEEEcCCCCCHHHHHHHHHhCC---CCEEEEEECCHHHHHHHHHHHHHcC---CCCCeEEE
Confidence 45566777777778899999999999999999999998753 4799999999999999999999876 34789999
Q ss_pred ecChhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHH
Q 041272 158 NMCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFA 237 (267)
Q Consensus 158 ~~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 237 (267)
+++..++..... ..||+|+++++++|..+..+........++++++.++|||||++++.++.++..+..+...+..|+
T Consensus 80 ~~d~~~~~~~~~--~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~ 157 (197)
T 3eey_A 80 KDGHQNMDKYID--CPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFL 157 (197)
T ss_dssp CSCGGGGGGTCC--SCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHH
T ss_pred ECCHHHHhhhcc--CCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHH
Confidence 988877665433 479999999999898877777777788889999999999999999999988887878888999999
Q ss_pred HhCCCCceEEEEEeeecC-CCCceEEEeecC
Q 041272 238 RSLSVDDWICCKFQMLNR-PLAPVLVFLFKR 267 (267)
Q Consensus 238 ~~l~~~~~~~~~~~~~~~-~~~p~~~~~~k~ 267 (267)
+.+...+|.+..+.++++ ..+|++++++++
T Consensus 158 ~~l~~~~~~v~~~~~~~~~~~pp~~~~~~~~ 188 (197)
T 3eey_A 158 KGVDQKKFIVQRTDFINQANCPPILVCIEKI 188 (197)
T ss_dssp TTSCTTTEEEEEEEETTCCSCCCEEEEEEEC
T ss_pred HhCCCCcEEEEEEEeccCccCCCeEEEEEEc
Confidence 999999999999999999 578899998875
No 3
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.82 E-value=2.9e-19 Score=152.30 Aligned_cols=123 Identities=15% Similarity=0.192 Sum_probs=97.5
Q ss_pred HHhhHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecCh
Q 041272 82 IAANGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCH 161 (267)
Q Consensus 82 ~~~~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~ 161 (267)
+....++...+++|.+|||+|||+|..+..+++.++. ++.+|+|||+|+.|++.|+++++..+ ...++++++++.
T Consensus 58 ~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~--~~~~v~gvD~s~~ml~~A~~~~~~~~---~~~~v~~~~~D~ 132 (261)
T 4gek_A 58 SMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHH--DNCKIIAIDNSPAMIERCRRHIDAYK---APTPVDVIEGDI 132 (261)
T ss_dssp HHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCS--SSCEEEEEESCHHHHHHHHHHHHTSC---CSSCEEEEESCT
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCC--CCCEEEEEECCHHHHHHHHHHHHhhc---cCceEEEeeccc
Confidence 3444555667899999999999999999999998753 46799999999999999999998866 356899998776
Q ss_pred hhhhhcCCCCCcEEEEEEeCCCCCCCCCceee--chhhHHHHHHHHHhcccCCcEEEEEEecCC
Q 041272 162 SRMEEIVPKSTAVRLVAFNLGYLPGGDKSVIT--TSETTKMALEAAERILIPGGLISMVVYVGH 223 (267)
Q Consensus 162 ~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 223 (267)
.++ .. .++|+|+++. +++ ..++..+++++++++|||||++++.+....
T Consensus 133 ~~~---~~--~~~d~v~~~~---------~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 133 RDI---AI--ENASMVVLNF---------TLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSF 182 (261)
T ss_dssp TTC---CC--CSEEEEEEES---------CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred ccc---cc--cccccceeee---------eeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCC
Confidence 543 22 2589998873 222 234567899999999999999999876443
No 4
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.81 E-value=1.5e-19 Score=150.78 Aligned_cols=157 Identities=13% Similarity=0.132 Sum_probs=112.1
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
..++||++|||+|||+|.++..+|+.+|+ .++|+|+|++++|++.+++++++ ..|+..+.++..+......
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~---~G~V~avD~s~~~~~~l~~~a~~------~~ni~~V~~d~~~p~~~~~ 143 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGP---RGRIYGVEFAPRVMRDLLTVVRD------RRNIFPILGDARFPEKYRH 143 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCT---TCEEEEEECCHHHHHHHHHHSTT------CTTEEEEESCTTCGGGGTT
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCC---CceEEEEeCCHHHHHHHHHhhHh------hcCeeEEEEeccCcccccc
Confidence 45789999999999999999999999986 79999999999999999998876 3588888888777666555
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCCh-hhHHHHHHHHHhCCCCceEEE
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGR-EELEAVEAFARSLSVDDWICC 248 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~ 248 (267)
....+|+|+.++.+ +.+...+++++.+.|||||++++++........ .......+..+.+...+|++.
T Consensus 144 ~~~~vDvVf~d~~~-----------~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~ 212 (233)
T 4df3_A 144 LVEGVDGLYADVAQ-----------PEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIK 212 (233)
T ss_dssp TCCCEEEEEECCCC-----------TTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEE
T ss_pred ccceEEEEEEeccC-----------ChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEE
Confidence 55689999887422 355678999999999999999987653221000 001122233344455678776
Q ss_pred EEeeecC--CCCceEEEeec
Q 041272 249 KFQMLNR--PLAPVLVFLFK 266 (267)
Q Consensus 249 ~~~~~~~--~~~p~~~~~~k 266 (267)
....+.. .++-.++.+.+
T Consensus 213 e~i~L~pf~~~H~lv~~~~r 232 (233)
T 4df3_A 213 DVVHLDPFDRDHAMIYAVMR 232 (233)
T ss_dssp EEEECTTTSTTEEEEEECC-
T ss_pred EEEccCCCCCceEEEEEEEe
Confidence 6555443 24444444443
No 5
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.76 E-value=2.1e-17 Score=137.52 Aligned_cols=147 Identities=16% Similarity=0.174 Sum_probs=104.7
Q ss_pred HhhhcCCCCEEEEecCC-CChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh
Q 041272 88 WKHVVRKGDTVVDATCG-NGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE 166 (267)
Q Consensus 88 ~~~~l~~~~~VLDlGcG-~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 166 (267)
+...++++.+|||+||| +|.++..+++.. +.+|+|+|+|+.+++.|++++..++ . ++++++++...+..
T Consensus 49 ~~~~~~~~~~vLDlG~G~~G~~~~~la~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~----~-~v~~~~~d~~~~~~ 118 (230)
T 3evz_A 49 LKTFLRGGEVALEIGTGHTAMMALMAEKFF-----NCKVTATEVDEEFFEYARRNIERNN----S-NVRLVKSNGGIIKG 118 (230)
T ss_dssp HHTTCCSSCEEEEECCTTTCHHHHHHHHHH-----CCEEEEEECCHHHHHHHHHHHHHTT----C-CCEEEECSSCSSTT
T ss_pred hHhhcCCCCEEEEcCCCHHHHHHHHHHHhc-----CCEEEEEECCHHHHHHHHHHHHHhC----C-CcEEEeCCchhhhh
Confidence 44457789999999999 999999999885 2799999999999999999999877 3 88999877543433
Q ss_pred cCCCCCcEEEEEEeCCCCCCCCCcee----------echhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHH
Q 041272 167 IVPKSTAVRLVAFNLGYLPGGDKSVI----------TTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAF 236 (267)
Q Consensus 167 ~~~~~~~~d~ii~~~~~lp~~d~~~~----------~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~ 236 (267)
.. +..||+|++|++|.+..+.... +.......+++++.++|||||++++..... ......+.++
T Consensus 119 ~~--~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----~~~~~~~~~~ 192 (230)
T 3evz_A 119 VV--EGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK----EKLLNVIKER 192 (230)
T ss_dssp TC--CSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC----HHHHHHHHHH
T ss_pred cc--cCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc----HhHHHHHHHH
Confidence 32 3589999999988665542221 112334789999999999999999876521 2233344444
Q ss_pred HHhCCCCceEEEEEeee
Q 041272 237 ARSLSVDDWICCKFQML 253 (267)
Q Consensus 237 ~~~l~~~~~~~~~~~~~ 253 (267)
++ ..+|.+....+.
T Consensus 193 l~---~~g~~~~~~~~~ 206 (230)
T 3evz_A 193 GI---KLGYSVKDIKFK 206 (230)
T ss_dssp HH---HTTCEEEEEEEC
T ss_pred HH---HcCCceEEEEec
Confidence 44 446776666554
No 6
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.75 E-value=2.1e-17 Score=136.34 Aligned_cols=145 Identities=17% Similarity=0.209 Sum_probs=106.7
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++..++ ..+|+|+|+|+.+++.|++++...+ ..+++++.++..++ ..+
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~---~~~ 103 (219)
T 3dh0_A 34 GLKEGMTVLDVGTGAGFYLPYLSKMVGE---KGKVYAIDVQEEMVNYAWEKVNKLG----LKNVEVLKSEENKI---PLP 103 (219)
T ss_dssp TCCTTCEEEESSCTTCTTHHHHHHHHTT---TCEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEECBTTBC---SSC
T ss_pred CCCCCCEEEEEecCCCHHHHHHHHHhCC---CcEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEecccccC---CCC
Confidence 4678899999999999999999998643 5799999999999999999998876 45799988766443 234
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCC----hhhHHHHHHHHHhCCCCceE
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGG----REELEAVEAFARSLSVDDWI 246 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~ 246 (267)
+..||+|+++ .++++.++...+++++.++|||||++++.++...... .........+.+.+...+|+
T Consensus 104 ~~~fD~v~~~---------~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 174 (219)
T 3dh0_A 104 DNTVDFIFMA---------FTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIR 174 (219)
T ss_dssp SSCEEEEEEE---------SCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCE
T ss_pred CCCeeEEEee---------hhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCE
Confidence 5589999998 3445556678999999999999999999887533211 11111122333334446788
Q ss_pred EEEEeeec
Q 041272 247 CCKFQMLN 254 (267)
Q Consensus 247 ~~~~~~~~ 254 (267)
++......
T Consensus 175 ~~~~~~~~ 182 (219)
T 3dh0_A 175 VGRVVEVG 182 (219)
T ss_dssp EEEEEEET
T ss_pred EEEEEeeC
Confidence 77765543
No 7
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.75 E-value=3.8e-17 Score=134.76 Aligned_cols=142 Identities=14% Similarity=0.170 Sum_probs=94.8
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||+|||+|..+..+++..+ +++|+|+|+|+.|++.+.+.++.. .++.++.++..+.....+.
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~----~~~V~gvD~s~~~l~~~~~~a~~~------~~v~~~~~d~~~~~~~~~~ 123 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVD----EGIIYAVEYSAKPFEKLLELVRER------NNIIPLLFDASKPWKYSGI 123 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTT----TSEEEEECCCHHHHHHHHHHHHHC------SSEEEECSCTTCGGGTTTT
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcC----CCEEEEEECCHHHHHHHHHHHhcC------CCeEEEEcCCCCchhhccc
Confidence 457889999999999999999999864 379999999999988877766542 4677777666544221222
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCCh-hhHHHHHHHHHhCCCCceEEEE
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGR-EELEAVEAFARSLSVDDWICCK 249 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~ 249 (267)
..+||+|+++.. .+.....+++++.++|||||+++++......... ...+....-.+.+... |.+..
T Consensus 124 ~~~fD~V~~~~~-----------~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~ 191 (210)
T 1nt2_A 124 VEKVDLIYQDIA-----------QKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVK 191 (210)
T ss_dssp CCCEEEEEECCC-----------STTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEE
T ss_pred ccceeEEEEecc-----------ChhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEee
Confidence 257999999831 1233345699999999999999998543211111 1111111222334455 88777
Q ss_pred Eeeec
Q 041272 250 FQMLN 254 (267)
Q Consensus 250 ~~~~~ 254 (267)
.....
T Consensus 192 ~~~~~ 196 (210)
T 1nt2_A 192 HGSLM 196 (210)
T ss_dssp EEECT
T ss_pred eecCC
Confidence 66553
No 8
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.74 E-value=3.2e-17 Score=139.30 Aligned_cols=147 Identities=16% Similarity=0.241 Sum_probs=103.7
Q ss_pred hcC-CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 91 VVR-KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 91 ~l~-~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
.++ ++.+|||+|||+|.++..++++. ..+|+|+|+++.+++.|++++..++ ...+++++++|..++.....
T Consensus 45 ~~~~~~~~vLDlG~G~G~~~~~la~~~-----~~~v~gvDi~~~~~~~a~~n~~~~~---~~~~v~~~~~D~~~~~~~~~ 116 (259)
T 3lpm_A 45 YLPIRKGKIIDLCSGNGIIPLLLSTRT-----KAKIVGVEIQERLADMAKRSVAYNQ---LEDQIEIIEYDLKKITDLIP 116 (259)
T ss_dssp CCCSSCCEEEETTCTTTHHHHHHHTTC-----CCEEEEECCSHHHHHHHHHHHHHTT---CTTTEEEECSCGGGGGGTSC
T ss_pred cCCCCCCEEEEcCCchhHHHHHHHHhc-----CCcEEEEECCHHHHHHHHHHHHHCC---CcccEEEEECcHHHhhhhhc
Confidence 355 78899999999999999999874 2499999999999999999999887 45679999988877654332
Q ss_pred CCCcEEEEEEeCCCCCCCCCcee-----------echhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHH
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVI-----------TTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFAR 238 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~-----------~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~ 238 (267)
...||+|++|++|......... ........+++.+.++|||||+++++... .....+...+.
T Consensus 117 -~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~------~~~~~~~~~l~ 189 (259)
T 3lpm_A 117 -KERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP------ERLLDIIDIMR 189 (259)
T ss_dssp -TTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT------TTHHHHHHHHH
T ss_pred -cCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH------HHHHHHHHHHH
Confidence 3589999999888554111111 11234578999999999999999986531 12233333333
Q ss_pred hCCCCceEEEEEeeecC
Q 041272 239 SLSVDDWICCKFQMLNR 255 (267)
Q Consensus 239 ~l~~~~~~~~~~~~~~~ 255 (267)
..+|...+..++..
T Consensus 190 ---~~~~~~~~~~~v~~ 203 (259)
T 3lpm_A 190 ---KYRLEPKRIQFVHP 203 (259)
T ss_dssp ---HTTEEEEEEEEEES
T ss_pred ---HCCCceEEEEEeec
Confidence 34577776666544
No 9
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.72 E-value=4e-17 Score=136.93 Aligned_cols=119 Identities=11% Similarity=0.099 Sum_probs=91.9
Q ss_pred HHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhh
Q 041272 86 GVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRME 165 (267)
Q Consensus 86 ~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~ 165 (267)
.+......+|.+|||||||+|..+..+++.. ..+|+|||+|+.+++.|+++....+ .++.++.++..++.
T Consensus 52 ~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~-----~~~v~~id~~~~~~~~a~~~~~~~~-----~~~~~~~~~a~~~~ 121 (236)
T 3orh_A 52 ALAAAASSKGGRVLEVGFGMAIAASKVQEAP-----IDEHWIIECNDGVFQRLRDWAPRQT-----HKVIPLKGLWEDVA 121 (236)
T ss_dssp HHHHHHTTTCEEEEEECCTTSHHHHHHTTSC-----EEEEEEEECCHHHHHHHHHHGGGCS-----SEEEEEESCHHHHG
T ss_pred HHHHhhccCCCeEEEECCCccHHHHHHHHhC-----CcEEEEEeCCHHHHHHHHHHHhhCC-----CceEEEeehHHhhc
Confidence 3333345688999999999999999998763 2689999999999999999988755 67888888877665
Q ss_pred hcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 166 EIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 166 ~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
..++ +.+||.|+++... ......+..+...+++++.|+|||||+|.+..
T Consensus 122 ~~~~-~~~FD~i~~D~~~----~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 122 PTLP-DGHFDGILYDTYP----LSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp GGSC-TTCEEEEEECCCC----CBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cccc-ccCCceEEEeeee----cccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 4443 4589999988321 11223356778899999999999999997643
No 10
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.72 E-value=5.2e-17 Score=137.10 Aligned_cols=109 Identities=14% Similarity=0.075 Sum_probs=90.2
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.|+++++..+ ...+++++.++..++. .
T Consensus 33 ~~~~~~~VLDiGcG~G~~~~~la~~~~-----~~v~gvD~s~~~l~~a~~~~~~~~---~~~~v~~~~~d~~~~~---~- 100 (256)
T 1nkv_A 33 RMKPGTRILDLGSGSGEMLCTWARDHG-----ITGTGIDMSSLFTAQAKRRAEELG---VSERVHFIHNDAAGYV---A- 100 (256)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHHTC-----CEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCCTTCC---C-
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhcC-----CeEEEEeCCHHHHHHHHHHHHhcC---CCcceEEEECChHhCC---c-
Confidence 467889999999999999999998863 689999999999999999998876 3458999987765542 2
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+..||+|++. .+.++.++..++++++.++|||||++++.+.
T Consensus 101 ~~~fD~V~~~---------~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 101 NEKCDVAACV---------GATWIAGGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp SSCEEEEEEE---------SCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred CCCCCEEEEC---------CChHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence 4589999986 2444445568999999999999999999765
No 11
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.72 E-value=2.2e-16 Score=131.84 Aligned_cols=145 Identities=11% Similarity=0.110 Sum_probs=103.7
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||+|||+|.++..+++.+++ +++|+|+|+|+.+++.+.++++.+ .+++++.++..+.......
T Consensus 74 ~~~~~~~vLDlG~G~G~~~~~la~~~g~---~~~v~gvD~s~~~i~~~~~~a~~~------~~v~~~~~d~~~~~~~~~~ 144 (233)
T 2ipx_A 74 HIKPGAKVLYLGAASGTTVSHVSDIVGP---DGLVYAVEFSHRSGRDLINLAKKR------TNIIPVIEDARHPHKYRML 144 (233)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHCT---TCEEEEECCCHHHHHHHHHHHHHC------TTEEEECSCTTCGGGGGGG
T ss_pred cCCCCCEEEEEcccCCHHHHHHHHHhCC---CcEEEEEECCHHHHHHHHHHhhcc------CCeEEEEcccCChhhhccc
Confidence 4678899999999999999999998743 479999999999999888888763 5788988877654322222
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCC-CCChhhHHHHHHHHHhCCCCceEEEE
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGH-PGGREELEAVEAFARSLSVDDWICCK 249 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~ 249 (267)
+..||+|+++++ .+.....+++++.++|||||++++.+.... ..............+.+...+|.+..
T Consensus 145 ~~~~D~V~~~~~-----------~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 213 (233)
T 2ipx_A 145 IAMVDVIFADVA-----------QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQE 213 (233)
T ss_dssp CCCEEEEEECCC-----------CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEE
T ss_pred CCcEEEEEEcCC-----------CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEE
Confidence 347999999853 123335678899999999999999766421 11111111122225777778899888
Q ss_pred EeeecC
Q 041272 250 FQMLNR 255 (267)
Q Consensus 250 ~~~~~~ 255 (267)
...+..
T Consensus 214 ~~~~~~ 219 (233)
T 2ipx_A 214 QLTLEP 219 (233)
T ss_dssp EEECTT
T ss_pred EEecCC
Confidence 665544
No 12
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.72 E-value=3.8e-17 Score=133.93 Aligned_cols=147 Identities=11% Similarity=0.067 Sum_probs=97.7
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccc--------cccccceEEEecChh
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTS--------KAEKGLVKLFNMCHS 162 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~--------~~~~~~v~~~~~~~~ 162 (267)
.+.++.+|||+|||+|..+..|++. +.+|+|||+|+.|++.|+++...... .....+++++++|..
T Consensus 19 ~~~~~~~vLD~GCG~G~~~~~la~~------g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 92 (203)
T 1pjz_A 19 NVVPGARVLVPLCGKSQDMSWLSGQ------GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF 92 (203)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHH------CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred ccCCCCEEEEeCCCCcHhHHHHHHC------CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence 4568899999999999999999987 46999999999999999988653100 001257889887765
Q ss_pred hhhhcCCCC-CcEEEEEEeCCCCCCCCCceee-chhhHHHHHHHHHhcccCCcEEEEEEecCCC---CChhhHHHHHHHH
Q 041272 163 RMEEIVPKS-TAVRLVAFNLGYLPGGDKSVIT-TSETTKMALEAAERILIPGGLISMVVYVGHP---GGREELEAVEAFA 237 (267)
Q Consensus 163 ~l~~~~~~~-~~~d~ii~~~~~lp~~d~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~---~~~~~~~~~~~~~ 237 (267)
++.. .+ .+||+|++... +.+ ..+...++++++.++|||||++++.+..... .+.......+++.
T Consensus 93 ~l~~---~~~~~fD~v~~~~~--------l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~ 161 (203)
T 1pjz_A 93 ALTA---RDIGHCAAFYDRAA--------MIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLH 161 (203)
T ss_dssp SSTH---HHHHSEEEEEEESC--------GGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHH
T ss_pred cCCc---ccCCCEEEEEECcc--------hhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHH
Confidence 5432 11 47999998631 112 2345678999999999999985554432111 0100001123445
Q ss_pred HhCCCCceEEEEEeeecC
Q 041272 238 RSLSVDDWICCKFQMLNR 255 (267)
Q Consensus 238 ~~l~~~~~~~~~~~~~~~ 255 (267)
+.+.. +|++........
T Consensus 162 ~~~~~-gf~i~~~~~~~~ 178 (203)
T 1pjz_A 162 RVMSG-NWEVTKVGGQDT 178 (203)
T ss_dssp HTSCS-SEEEEEEEESSC
T ss_pred HHhcC-CcEEEEeccccc
Confidence 55665 888877665544
No 13
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.72 E-value=7.4e-16 Score=125.91 Aligned_cols=124 Identities=14% Similarity=0.116 Sum_probs=95.9
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
..++++.+|||+|||+|.++..+++..+ ..+|+|+|+|+++++.|+++++.++ ..+++++.++..+. ..
T Consensus 36 l~~~~~~~vLDiG~G~G~~~~~la~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~---~~ 104 (204)
T 3e05_A 36 LRLQDDLVMWDIGAGSASVSIEASNLMP----NGRIFALERNPQYLGFIRDNLKKFV----ARNVTLVEAFAPEG---LD 104 (204)
T ss_dssp TTCCTTCEEEEETCTTCHHHHHHHHHCT----TSEEEEEECCHHHHHHHHHHHHHHT----CTTEEEEECCTTTT---CT
T ss_pred cCCCCCCEEEEECCCCCHHHHHHHHHCC----CCEEEEEeCCHHHHHHHHHHHHHhC----CCcEEEEeCChhhh---hh
Confidence 3567889999999999999999999853 4899999999999999999998877 47899988766432 22
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCC
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLS 241 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~ 241 (267)
....||+|+++... ....++++++.++|||||++++... .......+.++++...
T Consensus 105 ~~~~~D~i~~~~~~------------~~~~~~l~~~~~~LkpgG~l~~~~~-----~~~~~~~~~~~l~~~g 159 (204)
T 3e05_A 105 DLPDPDRVFIGGSG------------GMLEEIIDAVDRRLKSEGVIVLNAV-----TLDTLTKAVEFLEDHG 159 (204)
T ss_dssp TSCCCSEEEESCCT------------TCHHHHHHHHHHHCCTTCEEEEEEC-----BHHHHHHHHHHHHHTT
T ss_pred cCCCCCEEEECCCC------------cCHHHHHHHHHHhcCCCeEEEEEec-----ccccHHHHHHHHHHCC
Confidence 22468999988422 1456899999999999999998776 2234455555665544
No 14
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.72 E-value=1.9e-16 Score=135.60 Aligned_cols=108 Identities=19% Similarity=0.177 Sum_probs=90.5
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.+++.+|+..+ +++|+|+|+++.+++.|++|++.++ ..++.+++++..++ ..
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~----~~~V~~vD~s~~av~~a~~n~~~n~----l~~~~~~~~d~~~~-~~--- 183 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSK----PKLVYAIEKNPTAYHYLCENIKLNK----LNNVIPILADNRDV-EL--- 183 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTC----CSEEEEEECCHHHHHHHHHHHHHTT----CSSEEEEESCGGGC-CC---
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCC----CCEEEEEeCCHHHHHHHHHHHHHcC----CCCEEEEECChHHc-Cc---
Confidence 467889999999999999999999853 3699999999999999999999987 56788998887665 22
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCC
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGH 223 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 223 (267)
...||+|+++++. ...++++++.+.|||||+++++++...
T Consensus 184 ~~~~D~Vi~d~p~-------------~~~~~l~~~~~~LkpgG~l~~s~~~~~ 223 (272)
T 3a27_A 184 KDVADRVIMGYVH-------------KTHKFLDKTFEFLKDRGVIHYHETVAE 223 (272)
T ss_dssp TTCEEEEEECCCS-------------SGGGGHHHHHHHEEEEEEEEEEEEEEG
T ss_pred cCCceEEEECCcc-------------cHHHHHHHHHHHcCCCCEEEEEEcCcc
Confidence 4479999999643 224688999999999999999988653
No 15
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.71 E-value=2.8e-16 Score=131.90 Aligned_cols=134 Identities=12% Similarity=0.064 Sum_probs=97.2
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
+++.+|||+|||+|..+..++... |+.+|+|+|+|+.|++.|+++++.++ ..++++++++..++......+.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~----~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~ 140 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF----PHLHVTIVDSLNKRITFLEKLSEALQ----LENTTFCHDRAETFGQRKDVRE 140 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC----TTCEEEEEESCHHHHHHHHHHHHHHT----CSSEEEEESCHHHHTTCTTTTT
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC----CCCEEEEEeCCHHHHHHHHHHHHHcC----CCCEEEEeccHHHhcccccccC
Confidence 567899999999999999999864 25899999999999999999999877 4579999988766542111134
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceEEEEEee
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWICCKFQM 252 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 252 (267)
.||+|++.. ..+...+++++.++|||||++++.... . ..++...+.+. +...+|.+.+...
T Consensus 141 ~fD~V~~~~-------------~~~~~~~l~~~~~~LkpgG~l~~~~g~--~-~~~~~~~~~~~---l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 141 SYDIVTARA-------------VARLSVLSELCLPLVKKNGLFVALKAA--S-AEEELNAGKKA---ITTLGGELENIHS 201 (240)
T ss_dssp CEEEEEEEC-------------CSCHHHHHHHHGGGEEEEEEEEEEECC----CHHHHHHHHHH---HHHTTEEEEEEEE
T ss_pred CccEEEEec-------------cCCHHHHHHHHHHhcCCCCEEEEEeCC--C-chHHHHHHHHH---HHHcCCeEeEEEE
Confidence 799999873 133578999999999999999876431 1 22233333333 3344676665543
Q ss_pred e
Q 041272 253 L 253 (267)
Q Consensus 253 ~ 253 (267)
+
T Consensus 202 ~ 202 (240)
T 1xdz_A 202 F 202 (240)
T ss_dssp E
T ss_pred E
Confidence 3
No 16
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.71 E-value=1.9e-16 Score=132.25 Aligned_cols=143 Identities=12% Similarity=0.140 Sum_probs=95.7
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
..+++|++|||+|||+|..+..+|+.+++ .++|+|+|+++.|++...+.+++ ..|+.++.+|.........
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~---~G~V~avD~s~~~l~~l~~~a~~------r~nv~~i~~Da~~~~~~~~ 142 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIEL---NGKAYGVEFSPRVVRELLLVAQR------RPNIFPLLADARFPQSYKS 142 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTT---TSEEEEEECCHHHHHHHHHHHHH------CTTEEEEECCTTCGGGTTT
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCC---CCEEEEEECcHHHHHHHHHHhhh------cCCeEEEEcccccchhhhc
Confidence 34779999999999999999999998865 68999999999998666555544 2578888887765433222
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCC---C-ChhhHHHHHHHHHhCCCCce
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHP---G-GREELEAVEAFARSLSVDDW 245 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~---~-~~~~~~~~~~~~~~l~~~~~ 245 (267)
....||+|++++.. +.....+...+.+.|||||++++++...+. . ..+.......+++. .+|
T Consensus 143 ~~~~~D~I~~d~a~-----------~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~---~gf 208 (232)
T 3id6_C 143 VVENVDVLYVDIAQ-----------PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLEN---SNF 208 (232)
T ss_dssp TCCCEEEEEECCCC-----------TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHH---TTE
T ss_pred cccceEEEEecCCC-----------hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHH---CCC
Confidence 23479999999532 222233455666699999999998654331 1 11112233344443 358
Q ss_pred EEEEEeeecC
Q 041272 246 ICCKFQMLNR 255 (267)
Q Consensus 246 ~~~~~~~~~~ 255 (267)
++.....+..
T Consensus 209 ~~~~~~~l~p 218 (232)
T 3id6_C 209 ETIQIINLDP 218 (232)
T ss_dssp EEEEEEECTT
T ss_pred EEEEEeccCC
Confidence 8877666644
No 17
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.71 E-value=8e-17 Score=136.79 Aligned_cols=118 Identities=14% Similarity=0.115 Sum_probs=87.7
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
....+.+|||||||+|..+..|++. +.+|+|+|+|+.|++.|++ ..++.+++++.+++ ..+
T Consensus 36 ~~~~~~~vLDvGcGtG~~~~~l~~~------~~~v~gvD~s~~ml~~a~~----------~~~v~~~~~~~e~~---~~~ 96 (257)
T 4hg2_A 36 VAPARGDALDCGCGSGQASLGLAEF------FERVHAVDPGEAQIRQALR----------HPRVTYAVAPAEDT---GLP 96 (257)
T ss_dssp HSSCSSEEEEESCTTTTTHHHHHTT------CSEEEEEESCHHHHHTCCC----------CTTEEEEECCTTCC---CCC
T ss_pred hcCCCCCEEEEcCCCCHHHHHHHHh------CCEEEEEeCcHHhhhhhhh----------cCCceeehhhhhhh---ccc
Confidence 3456789999999999999999987 4689999999999988764 35788888766443 345
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHH
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFA 237 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 237 (267)
+.+||+|++.. .+|+. +..++++++.|+|||||+|++..+........-...+..+.
T Consensus 97 ~~sfD~v~~~~---------~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~~~~~~~~~~~~~~~ 153 (257)
T 4hg2_A 97 PASVDVAIAAQ---------AMHWF-DLDRFWAELRRVARPGAVFAAVTYGLTRVDPEVDAVVDRLY 153 (257)
T ss_dssp SSCEEEEEECS---------CCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCCBCCHHHHHHHHHHH
T ss_pred CCcccEEEEee---------ehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCCCCCHHHHHHHHHHH
Confidence 67899999973 33333 35689999999999999999988754333333233334443
No 18
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.71 E-value=2.2e-16 Score=134.33 Aligned_cols=122 Identities=14% Similarity=0.128 Sum_probs=90.4
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhh---ccccccccceEEEecChhhhhh-c
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDK---TTSKAEKGLVKLFNMCHSRMEE-I 167 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~---~~~~~~~~~v~~~~~~~~~l~~-~ 167 (267)
+.++.+|||+|||+|.+++.++++.+ +.+|+|+|+++.+++.|++++.. ++ ...+++++++|..++.. .
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~----~~~v~gvDi~~~~~~~a~~n~~~~~~~~---l~~~v~~~~~D~~~~~~~~ 106 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLE----KAEVTLYERSQEMAEFARRSLELPDNAA---FSARIEVLEADVTLRAKAR 106 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCT----TEEEEEEESSHHHHHHHHHHTTSGGGTT---TGGGEEEEECCTTCCHHHH
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCC----CCeEEEEECCHHHHHHHHHHHHhhhhCC---CcceEEEEeCCHHHHhhhh
Confidence 45678999999999999999999853 48999999999999999999987 66 34579999888766522 1
Q ss_pred ---CCCCCcEEEEEEeCCCCCCCCCc-------e-e-echhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 168 ---VPKSTAVRLVAFNLGYLPGGDKS-------V-I-TTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 168 ---~~~~~~~d~ii~~~~~lp~~d~~-------~-~-~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
..++..||+|++|++|.+..... . . ........+++.+.++|||||+++++..
T Consensus 107 ~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 107 VEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp HHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 12235799999999886652100 0 0 1122357899999999999999988654
No 19
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.71 E-value=1e-15 Score=125.55 Aligned_cols=120 Identities=12% Similarity=0.073 Sum_probs=92.6
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+++++.|+++++.++ ...+++++.++..+... .
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~------~~~v~~vD~s~~~~~~a~~~~~~~g---~~~~v~~~~~d~~~~~~---~ 119 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLA------GGRAITIEPRADRIENIQKNIDTYG---LSPRMRAVQGTAPAALA---D 119 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCTTGGGT---T
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHc------CCEEEEEeCCHHHHHHHHHHHHHcC---CCCCEEEEeCchhhhcc---c
Confidence 4678899999999999999999988 3799999999999999999999877 23389999877755322 2
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCC
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLS 241 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~ 241 (267)
...||+|+++... ... +++++.++|||||++++... ..+....+.++++...
T Consensus 120 ~~~~D~v~~~~~~-------------~~~-~l~~~~~~LkpgG~lv~~~~-----~~~~~~~~~~~l~~~g 171 (204)
T 3njr_A 120 LPLPEAVFIGGGG-------------SQA-LYDRLWEWLAPGTRIVANAV-----TLESETLLTQLHARHG 171 (204)
T ss_dssp SCCCSEEEECSCC-------------CHH-HHHHHHHHSCTTCEEEEEEC-----SHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEECCcc-------------cHH-HHHHHHHhcCCCcEEEEEec-----CcccHHHHHHHHHhCC
Confidence 2368999987311 234 99999999999999998876 2344455555555543
No 20
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.71 E-value=3.6e-16 Score=132.21 Aligned_cols=136 Identities=13% Similarity=-0.017 Sum_probs=99.9
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|..++.+|...+ +.+|+|+|+|+.+++.|+++++.++ ..++++++++..++........
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~----l~~v~~~~~d~~~~~~~~~~~~ 150 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRP----ELELVLVDATRKKVAFVERAIEVLG----LKGARALWGRAEVLAREAGHRE 150 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCT----TCEEEEEESCHHHHHHHHHHHHHHT----CSSEEEEECCHHHHTTSTTTTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCC----CCEEEEEECCHHHHHHHHHHHHHhC----CCceEEEECcHHHhhcccccCC
Confidence 4678999999999999999998853 5899999999999999999999887 4679999988776643211235
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceEEEEEee
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWICCKFQM 252 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 252 (267)
+||+|++.. + .....+++.+.++|||||++++.... ...++.......++.+ ++.+.+...
T Consensus 151 ~fD~I~s~a---------~----~~~~~ll~~~~~~LkpgG~l~~~~g~---~~~~e~~~~~~~l~~~---G~~~~~~~~ 211 (249)
T 3g89_A 151 AYARAVARA---------V----APLCVLSELLLPFLEVGGAAVAMKGP---RVEEELAPLPPALERL---GGRLGEVLA 211 (249)
T ss_dssp CEEEEEEES---------S----CCHHHHHHHHGGGEEEEEEEEEEECS---CCHHHHTTHHHHHHHH---TEEEEEEEE
T ss_pred CceEEEECC---------c----CCHHHHHHHHHHHcCCCeEEEEEeCC---CcHHHHHHHHHHHHHc---CCeEEEEEE
Confidence 799999973 1 22368999999999999999875532 1233444444444443 465555444
Q ss_pred ecC
Q 041272 253 LNR 255 (267)
Q Consensus 253 ~~~ 255 (267)
+..
T Consensus 212 ~~~ 214 (249)
T 3g89_A 212 LQL 214 (249)
T ss_dssp EEC
T ss_pred eeC
Confidence 433
No 21
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.71 E-value=9.7e-17 Score=131.74 Aligned_cols=109 Identities=15% Similarity=0.116 Sum_probs=89.2
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
++++ +|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++...+ ...++++++.+..++. .++
T Consensus 42 ~~~~-~vLdiG~G~G~~~~~l~~~~-----~~~v~~~D~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~---~~~ 109 (219)
T 3dlc_A 42 ITAG-TCIDIGSGPGALSIALAKQS-----DFSIRALDFSKHMNEIALKNIADAN---LNDRIQIVQGDVHNIP---IED 109 (219)
T ss_dssp CCEE-EEEEETCTTSHHHHHHHHHS-----EEEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECBTTBCS---SCT
T ss_pred CCCC-EEEEECCCCCHHHHHHHHcC-----CCeEEEEECCHHHHHHHHHHHHhcc---ccCceEEEEcCHHHCC---CCc
Confidence 3444 99999999999999999872 4799999999999999999998876 3468999987665432 344
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
..||+|+++. ++++.++...+++++.++|||||++++.+..
T Consensus 110 ~~~D~v~~~~---------~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 110 NYADLIVSRG---------SVFFWEDVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp TCEEEEEEES---------CGGGCSCHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccccEEEECc---------hHhhccCHHHHHHHHHHhCCCCCEEEEEecc
Confidence 5899999983 4455567789999999999999999998653
No 22
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.70 E-value=6.6e-16 Score=138.67 Aligned_cols=162 Identities=15% Similarity=0.069 Sum_probs=111.7
Q ss_pred hHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhh
Q 041272 85 NGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRM 164 (267)
Q Consensus 85 ~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l 164 (267)
..++...+++|.+|||+|||+|.+++.+|+. +++|+|+|+|+.+++.|++|++.++ .. ..+.++|..++
T Consensus 205 r~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~------ga~V~avDis~~al~~a~~n~~~ng---~~--~~~~~~D~~~~ 273 (393)
T 4dmg_A 205 RRLFEAMVRPGERVLDVYSYVGGFALRAARK------GAYALAVDKDLEALGVLDQAALRLG---LR--VDIRHGEALPT 273 (393)
T ss_dssp HHHHHTTCCTTCEEEEESCTTTHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHT---CC--CEEEESCHHHH
T ss_pred HHHHHHHhcCCCeEEEcccchhHHHHHHHHc------CCeEEEEECCHHHHHHHHHHHHHhC---CC--CcEEEccHHHH
Confidence 4444445667999999999999999999986 3569999999999999999999987 22 24557666655
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCc
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDD 244 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~ 244 (267)
..... + .||+|++|++++......+........++++.+.++|||||++++.++..+.........+...+.... ..
T Consensus 274 l~~~~-~-~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g-~~ 350 (393)
T 4dmg_A 274 LRGLE-G-PFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLG-RR 350 (393)
T ss_dssp HHTCC-C-CEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHT-CC
T ss_pred HHHhc-C-CCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhC-Ce
Confidence 44332 2 399999998876655444444556678899999999999999997777555433332344444444433 23
Q ss_pred eEEEEEeeecCCCCceE
Q 041272 245 WICCKFQMLNRPLAPVL 261 (267)
Q Consensus 245 ~~~~~~~~~~~~~~p~~ 261 (267)
++++.... ..+++|..
T Consensus 351 ~~i~~~~~-~~~DhP~~ 366 (393)
T 4dmg_A 351 LRVHRVTY-QPEDHPWS 366 (393)
T ss_dssp EEEEEEEE-CCTTSCEE
T ss_pred EEEEEEcC-CCCCCCcC
Confidence 44444322 12355543
No 23
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.70 E-value=1e-15 Score=127.14 Aligned_cols=154 Identities=16% Similarity=0.174 Sum_probs=103.7
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||+|||+|.++..+++.+++ +++|+|+|+|+.+++.++++++.+ .+++++.++..+........
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~---~~~v~~vD~s~~~~~~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~ 141 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGW---EGKIFGIEFSPRVLRELVPIVEER------RNIVPILGDATKPEEYRALV 141 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCT---TSEEEEEESCHHHHHHHHHHHSSC------TTEEEEECCTTCGGGGTTTC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCC---CeEEEEEECCHHHHHHHHHHHhcc------CCCEEEEccCCCcchhhccc
Confidence 668899999999999999999998753 479999999999999999988762 57899888776543222222
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCC-CCChhhHHHHHHHHHhCCCCceEEEEE
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGH-PGGREELEAVEAFARSLSVDDWICCKF 250 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~ 250 (267)
..||+|+++.+ .+.....+++++.++|||||++++...... ..+..........+..+... |+++..
T Consensus 142 ~~~D~v~~~~~-----------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-f~~~~~ 209 (227)
T 1g8a_A 142 PKVDVIFEDVA-----------QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVERELSEY-FEVIER 209 (227)
T ss_dssp CCEEEEEECCC-----------STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHHHTT-SEEEEE
T ss_pred CCceEEEECCC-----------CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHHHhh-ceeeeE
Confidence 37999998853 122334569999999999999998843221 11111112222333334444 887776
Q ss_pred eeecCCCCc-eEEEeec
Q 041272 251 QMLNRPLAP-VLVFLFK 266 (267)
Q Consensus 251 ~~~~~~~~p-~~~~~~k 266 (267)
..+...... .+++.+|
T Consensus 210 ~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 210 LNLEPYEKDHALFVVRK 226 (227)
T ss_dssp EECTTTSSSEEEEEEEC
T ss_pred eccCcccCCCEEEEEEe
Confidence 655432222 3444443
No 24
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.70 E-value=1.2e-16 Score=133.41 Aligned_cols=140 Identities=16% Similarity=0.157 Sum_probs=100.6
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCc
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTA 173 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~ 173 (267)
++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|++++...+ ...+++++.++..++. .+..
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~----~~~~ 132 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP------ERFVVGLDISESALAKANETYGSSP---KAEYFSFVKEDVFTWR----PTEL 132 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT------TEEEEEECSCHHHHHHHHHHHTTSG---GGGGEEEECCCTTTCC----CSSC
T ss_pred CCCCEEEeCCCCCHHHHHHHhC------CCeEEEEECCHHHHHHHHHHhhccC---CCcceEEEECchhcCC----CCCC
Confidence 3459999999999999999864 5799999999999999999998754 3568999987765432 2348
Q ss_pred EEEEEEeCCCCCCCCCceeec--hhhHHHHHHHHHhcccCCcEEEEEEecCCCC--ChhhHHHHHHHHHhCCCCceEEEE
Q 041272 174 VRLVAFNLGYLPGGDKSVITT--SETTKMALEAAERILIPGGLISMVVYVGHPG--GREELEAVEAFARSLSVDDWICCK 249 (267)
Q Consensus 174 ~d~ii~~~~~lp~~d~~~~~~--~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~ 249 (267)
||+|+++. ++++ .+....+++++.++|||||++++..+..... +.........+.+.+...+|.++.
T Consensus 133 fD~v~~~~---------~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 203 (235)
T 3lcc_A 133 FDLIFDYV---------FFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVS 203 (235)
T ss_dssp EEEEEEES---------STTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEE
T ss_pred eeEEEECh---------hhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEE
Confidence 99999873 2222 3467899999999999999999887743211 111001122334444556788888
Q ss_pred EeeecC
Q 041272 250 FQMLNR 255 (267)
Q Consensus 250 ~~~~~~ 255 (267)
......
T Consensus 204 ~~~~~~ 209 (235)
T 3lcc_A 204 VEENPH 209 (235)
T ss_dssp EEECTT
T ss_pred EEecCC
Confidence 776655
No 25
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.70 E-value=1.7e-16 Score=131.56 Aligned_cols=119 Identities=13% Similarity=0.107 Sum_probs=89.3
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||||||+|.++..+|+..+ +.+|+|||+|+.+++.|++++...+ ..|+.++++|..++.....++.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p----~~~v~giD~s~~~l~~a~~~~~~~~----l~nv~~~~~Da~~~l~~~~~~~ 104 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRP----EQDFLGIEVHSPGVGACLASAHEEG----LSNLRVMCHDAVEVLHKMIPDN 104 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCT----TSEEEEECSCHHHHHHHHHHHHHTT----CSSEEEECSCHHHHHHHHSCTT
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCC----CCeEEEEEecHHHHHHHHHHHHHhC----CCcEEEEECCHHHHHHHHcCCC
Confidence 3678999999999999999999853 5899999999999999999998877 5789999998887543222345
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
++|.|+++++. |..........-....+++++.++|||||++++.+.
T Consensus 105 ~~d~v~~~~~~-p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 105 SLRMVQLFFPD-PWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp CEEEEEEESCC-CCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred ChheEEEeCCC-CccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 89999988432 111100000000113699999999999999998875
No 26
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.70 E-value=2.5e-16 Score=133.99 Aligned_cols=141 Identities=14% Similarity=0.159 Sum_probs=103.9
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
++++.+|||+|||+|.++..+++. + ..+|+|+|+|+.+++.|+++++..+ ...+++++.++..++ ..++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~----~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~---~~~~ 112 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-V----TGQVTGLDFLSGFIDIFNRNARQSG---LQNRVTGIVGSMDDL---PFRN 112 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-C----SSEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSC---CCCT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-c----CCEEEEEeCCHHHHHHHHHHHHHcC---CCcCcEEEEcChhhC---CCCC
Confidence 578899999999999999999987 2 4799999999999999999998876 346799998776543 2335
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCC-ChhhHH-----------HHHHHHHh
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPG-GREELE-----------AVEAFARS 239 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-~~~~~~-----------~~~~~~~~ 239 (267)
.+||+|+++. ++++. +...+++++.++|||||++++.+...... ...... ....+.+.
T Consensus 113 ~~fD~i~~~~---------~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (267)
T 3kkz_A 113 EELDLIWSEG---------AIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAK 182 (267)
T ss_dssp TCEEEEEESS---------CGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHH
T ss_pred CCEEEEEEcC---------Cceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHH
Confidence 6899999983 33333 56789999999999999999987532111 111111 12234444
Q ss_pred CCCCceEEEEEeee
Q 041272 240 LSVDDWICCKFQML 253 (267)
Q Consensus 240 l~~~~~~~~~~~~~ 253 (267)
+...+|.++....+
T Consensus 183 l~~aGf~~v~~~~~ 196 (267)
T 3kkz_A 183 IHKAGYLPVATFIL 196 (267)
T ss_dssp HHHTTEEEEEEEEC
T ss_pred HHHCCCEEEEEEEC
Confidence 55578888776554
No 27
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.70 E-value=4.3e-16 Score=132.75 Aligned_cols=112 Identities=20% Similarity=0.232 Sum_probs=91.5
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++...+ ...+++++.++..++ ..+
T Consensus 58 ~~~~~~~vLDiGcG~G~~~~~l~~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~---~~~ 126 (273)
T 3bus_A 58 DVRSGDRVLDVGCGIGKPAVRLATAR-----DVRVTGISISRPQVNQANARATAAG---LANRVTFSYADAMDL---PFE 126 (273)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHS-----CCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSC---CSC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhc-----CCEEEEEeCCHHHHHHHHHHHHhcC---CCcceEEEECccccC---CCC
Confidence 35688999999999999999999875 3799999999999999999998866 345799988766543 233
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
+..||+|++. .++++.++...+++++.++|||||++++.++..
T Consensus 127 ~~~fD~v~~~---------~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 127 DASFDAVWAL---------ESLHHMPDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp TTCEEEEEEE---------SCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred CCCccEEEEe---------chhhhCCCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 4589999988 344445566899999999999999999987643
No 28
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.70 E-value=6.3e-16 Score=124.90 Aligned_cols=111 Identities=16% Similarity=0.067 Sum_probs=90.3
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|.++..+++. + ..+|+|+|+|+++++.|+++++.++ ..++++++++..++..... +.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~----~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~-~~ 112 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-G----AASVLFVESDQRSAAVIARNIEALG----LSGATLRRGAVAAVVAAGT-TS 112 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T----CSEEEEEECCHHHHHHHHHHHHHHT----CSCEEEEESCHHHHHHHCC-SS
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-C----CCeEEEEECCHHHHHHHHHHHHHcC----CCceEEEEccHHHHHhhcc-CC
Confidence 47889999999999999988875 2 3689999999999999999999877 3789999988877654332 34
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHh--cccCCcEEEEEEec
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAER--ILIPGGLISMVVYV 221 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~--~LkpgG~l~i~~~~ 221 (267)
.||+|++++++.. ..+...++++++.+ +|||||++++....
T Consensus 113 ~fD~i~~~~p~~~--------~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 113 PVDLVLADPPYNV--------DSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp CCSEEEECCCTTS--------CHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred CccEEEECCCCCc--------chhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 7999999965421 13566789999998 99999999987764
No 29
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.69 E-value=3e-16 Score=132.47 Aligned_cols=142 Identities=15% Similarity=0.187 Sum_probs=103.1
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.|++++...+ ...+++++.++..++ ..+
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~-----~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~---~~~ 111 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK-----GQITGIDLFPDFIEIFNENAVKAN---CADRVKGITGSMDNL---PFQ 111 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC-----SEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSC---SSC
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC-----CeEEEEECCHHHHHHHHHHHHHcC---CCCceEEEECChhhC---CCC
Confidence 356788999999999999999999852 499999999999999999998877 345699998776443 234
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCC-ChhhH-H----------HHHHHHH
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPG-GREEL-E----------AVEAFAR 238 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-~~~~~-~----------~~~~~~~ 238 (267)
+.+||+|+++. ++++. +..++++++.++|||||++++.+...... ..... . ....+.+
T Consensus 112 ~~~fD~v~~~~---------~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (257)
T 3f4k_A 112 NEELDLIWSEG---------AIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCID 181 (257)
T ss_dssp TTCEEEEEEES---------CSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHH
T ss_pred CCCEEEEEecC---------hHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHH
Confidence 56899999983 33333 46789999999999999999987531111 11111 1 1233444
Q ss_pred hCCCCceEEEEEeee
Q 041272 239 SLSVDDWICCKFQML 253 (267)
Q Consensus 239 ~l~~~~~~~~~~~~~ 253 (267)
.+...+|.++.....
T Consensus 182 ~l~~aGf~~v~~~~~ 196 (257)
T 3f4k_A 182 KMERAGYTPTAHFIL 196 (257)
T ss_dssp HHHHTTEEEEEEEEC
T ss_pred HHHHCCCeEEEEEEC
Confidence 455578888775544
No 30
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.69 E-value=2.2e-16 Score=133.81 Aligned_cols=110 Identities=16% Similarity=0.224 Sum_probs=90.4
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|++++...+ ..++.++.++..++ ..+
T Consensus 34 ~~~~~~~vLDiGcG~G~~~~~l~~~~------~~v~gvD~s~~~l~~a~~~~~~~~----~~~v~~~~~d~~~l---~~~ 100 (260)
T 1vl5_A 34 ALKGNEEVLDVATGGGHVANAFAPFV------KKVVAFDLTEDILKVARAFIEGNG----HQQVEYVQGDAEQM---PFT 100 (260)
T ss_dssp TCCSCCEEEEETCTTCHHHHHHGGGS------SEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCC-CC---CSC
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhC------CEEEEEeCCHHHHHHHHHHHHhcC----CCceEEEEecHHhC---CCC
Confidence 45688999999999999999999873 589999999999999999998766 45789988776543 334
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
+..||+|+++. +.++.++...+++++.++|||||++++.+...
T Consensus 101 ~~~fD~V~~~~---------~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (260)
T 1vl5_A 101 DERFHIVTCRI---------AAHHFPNPASFVSEAYRVLKKGGQLLLVDNSA 143 (260)
T ss_dssp TTCEEEEEEES---------CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred CCCEEEEEEhh---------hhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCC
Confidence 46899999983 45555677899999999999999999986643
No 31
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.69 E-value=8.5e-16 Score=137.75 Aligned_cols=119 Identities=22% Similarity=0.334 Sum_probs=95.0
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccc----ccccceEEEecChhhhhhc
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSK----AEKGLVKLFNMCHSRMEEI 167 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~----~~~~~v~~~~~~~~~l~~~ 167 (267)
+.++.+|||+|||+|.++..+++.+++ +.+|+|+|+|+.+++.|+++++..... ....+++++.++..++...
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~ 157 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGE---HGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATA 157 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTT---TCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCC---CCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhc
Confidence 557889999999999999999998753 579999999999999999998754100 0125899999887766433
Q ss_pred ---CCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 168 ---VPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 168 ---~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
..++.+||+|+++. ++++.++...+++++.++|||||++++.+...
T Consensus 158 ~~~~~~~~~fD~V~~~~---------~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 158 EPEGVPDSSVDIVISNC---------VCNLSTNKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp BSCCCCTTCEEEEEEES---------CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred ccCCCCCCCEEEEEEcc---------chhcCCCHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 34456899999993 45555667899999999999999999987644
No 32
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.69 E-value=3.7e-16 Score=128.75 Aligned_cols=116 Identities=21% Similarity=0.147 Sum_probs=89.6
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|.++..+++..+ +.+|+|+|+|+.+++.|++++...+ ..++++++++..++...+. +.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p----~~~v~gvD~s~~~l~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~-~~ 110 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP----DINYIGIDIQKSVLSYALDKVLEVG----VPNIKLLWVDGSDLTDYFE-DG 110 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT----TSEEEEEESCHHHHHHHHHHHHHHC----CSSEEEEECCSSCGGGTSC-TT
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC----CCCEEEEEcCHHHHHHHHHHHHHcC----CCCEEEEeCCHHHHHhhcC-CC
Confidence 4678999999999999999999853 5899999999999999999998877 4789999988776554333 34
Q ss_pred cEEEEEEeCCCCCCCCCceeech--hhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTS--ETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.||.|+++++. |.... -+.. -....+++++.++|||||++++.+.
T Consensus 111 ~~D~i~~~~~~-~~~~~--~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 111 EIDRLYLNFSD-PWPKK--RHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp CCSEEEEESCC-CCCSG--GGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred CCCEEEEECCC-Ccccc--chhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 79999999532 11110 0111 1236899999999999999988763
No 33
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.69 E-value=4e-16 Score=128.76 Aligned_cols=116 Identities=17% Similarity=0.178 Sum_probs=89.4
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||||||+|.++..+|+..+ +.+|+|||+|+.+++.|++++...+ ..++++++++..++...+. +.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p----~~~v~giD~s~~~l~~a~~~~~~~~----~~nv~~~~~d~~~l~~~~~-~~ 107 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNP----DINYIGIELFKSVIVTAVQKVKDSE----AQNVKLLNIDADTLTDVFE-PG 107 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCT----TSEEEEECSCHHHHHHHHHHHHHSC----CSSEEEECCCGGGHHHHCC-TT
T ss_pred CCCceEEEEecCCCHHHHHHHHHCC----CCCEEEEEechHHHHHHHHHHHHcC----CCCEEEEeCCHHHHHhhcC-cC
Confidence 4678999999999999999999853 5899999999999999999998877 4789999988877655443 34
Q ss_pred cEEEEEEeCCCCCCCCCceeech--hhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTS--ETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+|.|+.+++. |.... .+.. -....+++++.++|||||.+++.+.
T Consensus 108 ~~d~v~~~~~~-p~~~~--~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 108 EVKRVYLNFSD-PWPKK--RHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp SCCEEEEESCC-CCCSG--GGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred CcCEEEEECCC-CCcCc--cccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 68988887532 11110 0111 1136899999999999999998763
No 34
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.69 E-value=9e-16 Score=127.95 Aligned_cols=144 Identities=8% Similarity=0.104 Sum_probs=97.5
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||+|||+|.++..+++.++ .++|+|+|+|+.+++.|+++++.+ .++.++.++..+.......
T Consensus 71 ~~~~~~~VLDlGcG~G~~~~~la~~~~----~~~v~gvD~s~~~~~~a~~~~~~~------~~v~~~~~d~~~~~~~~~~ 140 (230)
T 1fbn_A 71 PIKRDSKILYLGASAGTTPSHVADIAD----KGIVYAIEYAPRIMRELLDACAER------ENIIPILGDANKPQEYANI 140 (230)
T ss_dssp CCCTTCEEEEESCCSSHHHHHHHHHTT----TSEEEEEESCHHHHHHHHHHTTTC------TTEEEEECCTTCGGGGTTT
T ss_pred CCCCCCEEEEEcccCCHHHHHHHHHcC----CcEEEEEECCHHHHHHHHHHhhcC------CCeEEEECCCCCccccccc
Confidence 356889999999999999999999864 379999999999999999987652 5788888777653221211
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecC-CCCChhhHHHHHHHHHhCCCCceEEEE
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVG-HPGGREELEAVEAFARSLSVDDWICCK 249 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~ 249 (267)
...||+|+.++ +. +.....+++++.++|||||+++++.... ............+.+..+...+|.+..
T Consensus 141 ~~~~D~v~~~~---~~--------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~~l~~~Gf~~~~ 209 (230)
T 1fbn_A 141 VEKVDVIYEDV---AQ--------PNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKEILEAGGFKIVD 209 (230)
T ss_dssp SCCEEEEEECC---CS--------TTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHHHHHHHTEEEEE
T ss_pred CccEEEEEEec---CC--------hhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHHHHHHCCCEEEE
Confidence 24799999652 11 2234678999999999999999973321 111111111111122233445688777
Q ss_pred EeeecC
Q 041272 250 FQMLNR 255 (267)
Q Consensus 250 ~~~~~~ 255 (267)
...+..
T Consensus 210 ~~~~~~ 215 (230)
T 1fbn_A 210 EVDIEP 215 (230)
T ss_dssp EEECTT
T ss_pred EEccCC
Confidence 666544
No 35
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.69 E-value=4.1e-16 Score=133.90 Aligned_cols=109 Identities=18% Similarity=0.297 Sum_probs=91.1
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...+ ...+++++.++..++.... +
T Consensus 66 ~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~--~ 134 (285)
T 4htf_A 66 GPQKLRVLDAGGGEGQTAIKMAER------GHQVILCDLSAQMIDRAKQAAEAKG---VSDNMQFIHCAAQDVASHL--E 134 (285)
T ss_dssp CSSCCEEEEETCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHC-C---CGGGEEEEESCGGGTGGGC--S
T ss_pred CCCCCEEEEeCCcchHHHHHHHHC------CCEEEEEECCHHHHHHHHHHHHhcC---CCcceEEEEcCHHHhhhhc--C
Confidence 345779999999999999999987 3799999999999999999998876 3478999998877665433 3
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+||+|+++ .++++.++...+++++.++|||||++++..+
T Consensus 135 ~~fD~v~~~---------~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 135 TPVDLILFH---------AVLEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp SCEEEEEEE---------SCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCceEEEEC---------chhhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 579999998 3555556678999999999999999999876
No 36
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.69 E-value=4.2e-16 Score=135.11 Aligned_cols=117 Identities=12% Similarity=0.089 Sum_probs=91.1
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
..++++.+|||||||+|.++..+++..+ .+|+|+|+|+++++.|++++...+ ...+++++.++..++
T Consensus 68 ~~~~~~~~vLDiGcG~G~~~~~la~~~~-----~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~----- 134 (302)
T 3hem_A 68 LNLEPGMTLLDIGCGWGSTMRHAVAEYD-----VNVIGLTLSENQYAHDKAMFDEVD---SPRRKEVRIQGWEEF----- 134 (302)
T ss_dssp TCCCTTCEEEEETCTTSHHHHHHHHHHC-----CEEEEEECCHHHHHHHHHHHHHSC---CSSCEEEEECCGGGC-----
T ss_pred cCCCCcCEEEEeeccCcHHHHHHHHhCC-----CEEEEEECCHHHHHHHHHHHHhcC---CCCceEEEECCHHHc-----
Confidence 3467899999999999999999999863 689999999999999999998877 345899998777554
Q ss_pred CCCcEEEEEEeCCC--CCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 170 KSTAVRLVAFNLGY--LPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 170 ~~~~~d~ii~~~~~--lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
+..||+|+++... ++..+ ..........+++++.++|||||++++.++..
T Consensus 135 -~~~fD~v~~~~~~~~~~d~~--~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 135 -DEPVDRIVSLGAFEHFADGA--GDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp -CCCCSEEEEESCGGGTTCCS--SCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred -CCCccEEEEcchHHhcCccc--cccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 3479999987321 22110 00012455799999999999999999988753
No 37
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.69 E-value=4.3e-16 Score=135.77 Aligned_cols=142 Identities=15% Similarity=0.104 Sum_probs=106.2
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
++++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++...+ ...+++++.++..++ ..++
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~---~~~~ 183 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF-----GSRVEGVTLSAAQADFGNRRARELR---IDDHVRSRVCNMLDT---PFDK 183 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSC---CCCT
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHHHHHHcC---CCCceEEEECChhcC---CCCC
Confidence 5678999999999999999999985 3689999999999999999999877 345899998776543 2344
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCC---hhhHH-----------HHHHHH
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGG---REELE-----------AVEAFA 237 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---~~~~~-----------~~~~~~ 237 (267)
..||+|+++ .++++. +...+++++.++|||||++++.++...... ..... ....+.
T Consensus 184 ~~fD~V~~~---------~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 253 (312)
T 3vc1_A 184 GAVTASWNN---------ESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYL 253 (312)
T ss_dssp TCEEEEEEE---------SCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHH
T ss_pred CCEeEEEEC---------CchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHH
Confidence 589999998 234434 378999999999999999999876433211 11111 123445
Q ss_pred HhCCCCceEEEEEeeec
Q 041272 238 RSLSVDDWICCKFQMLN 254 (267)
Q Consensus 238 ~~l~~~~~~~~~~~~~~ 254 (267)
+.+...+|+++....+.
T Consensus 254 ~~l~~aGf~~~~~~~~~ 270 (312)
T 3vc1_A 254 RAMADNRLVPHTIVDLT 270 (312)
T ss_dssp HHHHTTTEEEEEEEECH
T ss_pred HHHHHCCCEEEEEEeCC
Confidence 55666789887766543
No 38
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.69 E-value=7e-16 Score=129.25 Aligned_cols=110 Identities=16% Similarity=0.184 Sum_probs=91.1
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|++++...+ ..+++++.++..++ ..+
T Consensus 18 ~~~~~~~vLDiGcG~G~~~~~l~~~~------~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~---~~~ 84 (239)
T 1xxl_A 18 ECRAEHRVLDIGAGAGHTALAFSPYV------QECIGVDATKEMVEVASSFAQEKG----VENVRFQQGTAESL---PFP 84 (239)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHGGGS------SEEEEEESCHHHHHHHHHHHHHHT----CCSEEEEECBTTBC---CSC
T ss_pred CcCCCCEEEEEccCcCHHHHHHHHhC------CEEEEEECCHHHHHHHHHHHHHcC----CCCeEEEecccccC---CCC
Confidence 57789999999999999999999873 589999999999999999998876 46788888766443 334
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
+..||+|+++ .+.++.++...+++++.++|||||++++.+...
T Consensus 85 ~~~fD~v~~~---------~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 85 DDSFDIITCR---------YAAHHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp TTCEEEEEEE---------SCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred CCcEEEEEEC---------CchhhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 4689999998 344455567899999999999999999987643
No 39
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.69 E-value=1.6e-15 Score=127.98 Aligned_cols=111 Identities=17% Similarity=0.146 Sum_probs=90.7
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||||||+|..+..+++.++. +++|+|+|+++++++.|+++++..+ ...+++++.++..+........
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~---~~~v~~vD~s~~~~~~a~~~~~~~g---~~~~v~~~~~d~~~~l~~~~~~ 134 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPA---DGQLLTLEADAHHAQVARENLQLAG---VDQRVTLREGPALQSLESLGEC 134 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCT---TCEEEEEECCHHHHHHHHHHHHHTT---CTTTEEEEESCHHHHHHTCCSC
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHhcCCC
Confidence 456789999999999999999998753 5899999999999999999999877 3458999998887654433333
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
..||+|+.+.. ......+++++.++|||||++++...
T Consensus 135 ~~fD~V~~d~~------------~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 135 PAFDLIFIDAD------------KPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp CCCSEEEECSC------------GGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CCeEEEEECCc------------hHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 47999998731 34456899999999999999987654
No 40
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.68 E-value=1.6e-16 Score=138.11 Aligned_cols=115 Identities=17% Similarity=0.212 Sum_probs=90.1
Q ss_pred HhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc
Q 041272 88 WKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI 167 (267)
Q Consensus 88 ~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~ 167 (267)
+...++++.+|||+|||+|..+..++... +|+.+|+|+|+|+.+++.|++++...+ ...++++++++..++.
T Consensus 112 l~~~l~~~~~vLDiGcG~G~~~~~la~~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~-- 183 (305)
T 3ocj_A 112 LQRHLRPGCVVASVPCGWMSELLALDYSA---CPGVQLVGIDYDPEALDGATRLAAGHA---LAGQITLHRQDAWKLD-- 183 (305)
T ss_dssp HHHHCCTTCEEEETTCTTCHHHHTSCCTT---CTTCEEEEEESCHHHHHHHHHHHTTST---TGGGEEEEECCGGGCC--
T ss_pred HHhhCCCCCEEEEecCCCCHHHHHHHHhc---CCCCeEEEEECCHHHHHHHHHHHHhcC---CCCceEEEECchhcCC--
Confidence 34557889999999999999999986332 236899999999999999999998876 3556999987765542
Q ss_pred CCCCCcEEEEEEeCCCCCCCCCceee---chhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 168 VPKSTAVRLVAFNLGYLPGGDKSVIT---TSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 168 ~~~~~~~d~ii~~~~~lp~~d~~~~~---~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
.+ ..||+|+++. +.+ .+....++++++.++|||||++++.++.
T Consensus 184 -~~-~~fD~v~~~~---------~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 184 -TR-EGYDLLTSNG---------LNIYEPDDARVTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp -CC-SCEEEEECCS---------SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred -cc-CCeEEEEECC---------hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 23 5899999873 222 2333456899999999999999998753
No 41
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.68 E-value=9.3e-16 Score=131.75 Aligned_cols=109 Identities=16% Similarity=0.218 Sum_probs=89.0
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||||||+|.++..+++..+ .+|+|+|+|+++++.|++++...+ ...+++++..+..++.
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-----~~v~gvd~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~----- 127 (287)
T 1kpg_A 61 GLQPGMTLLDVGCGWGATMMRAVEKYD-----VNVVGLTLSKNQANHVQQLVANSE---NLRSKRVLLAGWEQFD----- 127 (287)
T ss_dssp TCCTTCEEEEETCTTSHHHHHHHHHHC-----CEEEEEESCHHHHHHHHHHHHTCC---CCSCEEEEESCGGGCC-----
T ss_pred CCCCcCEEEEECCcccHHHHHHHHHcC-----CEEEEEECCHHHHHHHHHHHHhcC---CCCCeEEEECChhhCC-----
Confidence 467889999999999999999997653 599999999999999999998766 3468899887764432
Q ss_pred CCcEEEEEEeCCCCCCCCCceeech--hhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTS--ETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
..||+|++.. ++++. ++...+++++.++|||||++++.++..
T Consensus 128 -~~fD~v~~~~---------~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 128 -EPVDRIVSIG---------AFEHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp -CCCSEEEEES---------CGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred -CCeeEEEEeC---------chhhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 4799999872 33333 567899999999999999999987643
No 42
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.68 E-value=4.2e-16 Score=134.57 Aligned_cols=111 Identities=11% Similarity=0.137 Sum_probs=91.6
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.|++++...+ ...+++++.++..++ ..+
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-----~~v~gvD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~---~~~ 147 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFG-----VSIDCLNIAPVQNKRNEEYNNQAG---LADNITVKYGSFLEI---PCE 147 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHC-----CEEEEEESCHHHHHHHHHHHHHHT---CTTTEEEEECCTTSC---SSC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhC-----CEEEEEeCCHHHHHHHHHHHHhcC---CCcceEEEEcCcccC---CCC
Confidence 457889999999999999999999863 699999999999999999998776 346799988766443 334
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
+..||+|++. .++++.++...+++++.++|||||++++.++.
T Consensus 148 ~~~fD~v~~~---------~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 148 DNSYDFIWSQ---------DAFLHSPDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp TTCEEEEEEE---------SCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCEeEEEec---------chhhhcCCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 5689999988 34445555789999999999999999998764
No 43
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.68 E-value=1.1e-15 Score=126.94 Aligned_cols=115 Identities=18% Similarity=0.304 Sum_probs=88.8
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccc-ccccceEEEecChhhhhhcC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSK-AEKGLVKLFNMCHSRMEEIV 168 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~-~~~~~v~~~~~~~~~l~~~~ 168 (267)
..++++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...+.. ....++.++..+..++ .
T Consensus 26 ~~~~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~---~ 96 (235)
T 3sm3_A 26 NYLQEDDEILDIGCGSGKISLELASK------GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL---S 96 (235)
T ss_dssp HHCCTTCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC---C
T ss_pred HhCCCCCeEEEECCCCCHHHHHHHhC------CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc---C
Confidence 34678899999999999999999987 369999999999999999998876511 0023678887665443 3
Q ss_pred CCCCcEEEEEEeCCCCCCCCCceeech---hhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 169 PKSTAVRLVAFNLGYLPGGDKSVITTS---ETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d~~~~~~~---~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
.++..||+|+++. ++++. .....+++++.++|||||+++++++..
T Consensus 97 ~~~~~~D~v~~~~---------~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 97 FHDSSFDFAVMQA---------FLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp SCTTCEEEEEEES---------CGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred CCCCceeEEEEcc---------hhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 3356899999983 33333 334489999999999999999987743
No 44
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.68 E-value=3.4e-15 Score=127.90 Aligned_cols=130 Identities=13% Similarity=0.113 Sum_probs=98.5
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|.++..+++..+ +.+|+|+|+|+.+++.|+++++.++ ..++++++++..+. .. ..
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~----~~~v~~vD~s~~~l~~a~~n~~~~~----~~~v~~~~~d~~~~---~~-~~ 175 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERP----DCEIIAVDRMPDAVSLAQRNAQHLA----IKNIHILQSDWFSA---LA-GQ 175 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCT----TSEEEEECSSHHHHHHHHHHHHHHT----CCSEEEECCSTTGG---GT-TC
T ss_pred cCCCEEEEecCCccHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEEcchhhh---cc-cC
Confidence 5678999999999999999998754 4899999999999999999998877 45799998776443 22 34
Q ss_pred cEEEEEEeCCCCCCCCCc-----eeech-----------hhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHH
Q 041272 173 AVRLVAFNLGYLPGGDKS-----VITTS-----------ETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAF 236 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~-----~~~~~-----------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~ 236 (267)
.||+|++|++|++..+.. ..+.+ .....+++++.++|||||++++.... .....+.++
T Consensus 176 ~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~------~~~~~~~~~ 249 (276)
T 2b3t_A 176 QFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW------QQGEAVRQA 249 (276)
T ss_dssp CEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS------SCHHHHHHH
T ss_pred CccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc------hHHHHHHHH
Confidence 799999999998765411 11111 45688999999999999999886432 123445555
Q ss_pred HHhC
Q 041272 237 ARSL 240 (267)
Q Consensus 237 ~~~l 240 (267)
++..
T Consensus 250 l~~~ 253 (276)
T 2b3t_A 250 FILA 253 (276)
T ss_dssp HHHT
T ss_pred HHHC
Confidence 5553
No 45
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.68 E-value=3.8e-16 Score=125.24 Aligned_cols=149 Identities=11% Similarity=0.015 Sum_probs=106.2
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.+.++|||+|||+|.+++.++...+ +.+|+++|+|+.|++.+++++..++ ...++.+. +. .... .
T Consensus 46 ~l~~~~~VLDlGCG~GplAl~l~~~~p----~a~~~A~Di~~~~leiar~~~~~~g---~~~~v~~~--d~---~~~~-~ 112 (200)
T 3fzg_A 46 NIKHVSSILDFGCGFNPLALYQWNENE----KIIYHAYDIDRAEIAFLSSIIGKLK---TTIKYRFL--NK---ESDV-Y 112 (200)
T ss_dssp HSCCCSEEEEETCTTHHHHHHHHCSSC----CCEEEEECSCHHHHHHHHHHHHHSC---CSSEEEEE--CC---HHHH-T
T ss_pred hcCCCCeEEEecCCCCHHHHHHHhcCC----CCEEEEEeCCHHHHHHHHHHHHhcC---CCccEEEe--cc---cccC-C
Confidence 467788999999999999999988754 5799999999999999999999887 23367762 22 1112 2
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCC----CCChhhHHHHHHHHHhCCCCceE
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGH----PGGREELEAVEAFARSLSVDDWI 246 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~ 246 (267)
..+||+|+.. .++|..++.+..+.++++.|||||+++-.. ... ..+. +......|.+......+.
T Consensus 113 ~~~~DvVLa~---------k~LHlL~~~~~al~~v~~~L~pggvfISfp-tksl~Gr~~gm-~~~Y~~~~~~~~~~~~~~ 181 (200)
T 3fzg_A 113 KGTYDVVFLL---------KMLPVLKQQDVNILDFLQLFHTQNFVISFP-IKSLSGKEKGM-EENYQLWFESFTKGWIKI 181 (200)
T ss_dssp TSEEEEEEEE---------TCHHHHHHTTCCHHHHHHTCEEEEEEEEEE-CCCCC--CTTC-CCCHHHHHHHHTTTTSCE
T ss_pred CCCcChhhHh---------hHHHhhhhhHHHHHHHHHHhCCCCEEEEeC-hHHhcCCCcch-hhhHHHHHHHhccCccee
Confidence 3479999988 466666777778889999999999884332 111 1121 122344566667777777
Q ss_pred EEEEeeecCCCCceEEEeecC
Q 041272 247 CCKFQMLNRPLAPVLVFLFKR 267 (267)
Q Consensus 247 ~~~~~~~~~~~~p~~~~~~k~ 267 (267)
+.+..+-| ..+++++|+
T Consensus 182 ~~~~~~~n----El~y~~~~~ 198 (200)
T 3fzg_A 182 LDSKVIGN----ELVYITSGF 198 (200)
T ss_dssp EEEEEETT----EEEEEECCC
T ss_pred eeeeeeCc----eEEEEEecc
Confidence 77777744 566666653
No 46
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.68 E-value=1.3e-15 Score=136.68 Aligned_cols=123 Identities=12% Similarity=0.043 Sum_probs=94.5
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccccccc-ceEEEecChhhhhh-cCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKG-LVKLFNMCHSRMEE-IVPK 170 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~-~v~~~~~~~~~l~~-~~~~ 170 (267)
.++.+|||+|||+|.+++.+|+.. ..+|+|+|+|+.+++.|++|++.++ ... +++++++|..+... ....
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-----a~~V~~vD~s~~al~~A~~N~~~n~---~~~~~v~~~~~D~~~~l~~~~~~ 282 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-----AMATTSVDLAKRSRALSLAHFEANH---LDMANHQLVVMDVFDYFKYARRH 282 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-----BSEEEEEESCTTHHHHHHHHHHHTT---CCCTTEEEEESCHHHHHHHHHHT
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-----CCEEEEEECCHHHHHHHHHHHHHcC---CCccceEEEECCHHHHHHHHHHh
Confidence 678899999999999999999851 2589999999999999999999987 233 89999988876433 2222
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCC
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGH 223 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 223 (267)
+..||+|++|+++................++++.+.++|+|||++++++....
T Consensus 283 ~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 283 HLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp TCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 34799999998775332222333445667889999999999999999887544
No 47
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.67 E-value=1.5e-15 Score=127.22 Aligned_cols=136 Identities=17% Similarity=0.149 Sum_probs=97.5
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCc
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTA 173 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~ 173 (267)
++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|++++...+ ..++.++..+..++ ..++..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~---~~~~~~ 146 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-----FREVDMVDITEDFLVQAKTYLGEEG----KRVRNYFCCGLQDF---TPEPDS 146 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-----CSEEEEEESCHHHHHHHHHHTGGGG----GGEEEEEECCGGGC---CCCSSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-----CCEEEEEeCCHHHHHHHHHHhhhcC----CceEEEEEcChhhc---CCCCCC
Confidence 57899999999999999998874 2589999999999999999987754 35788887665433 334457
Q ss_pred EEEEEEeCCCCCCCCCceeechh--hHHHHHHHHHhcccCCcEEEEEEecCCC-------CC--hhhHHHHHHHHHhCCC
Q 041272 174 VRLVAFNLGYLPGGDKSVITTSE--TTKMALEAAERILIPGGLISMVVYVGHP-------GG--REELEAVEAFARSLSV 242 (267)
Q Consensus 174 ~d~ii~~~~~lp~~d~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~-------~~--~~~~~~~~~~~~~l~~ 242 (267)
||+|+++. ++++.+ ....+++++.++|||||++++.++.... .. ......+.++++.
T Consensus 147 fD~v~~~~---------~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--- 214 (241)
T 2ex4_A 147 YDVIWIQW---------VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICS--- 214 (241)
T ss_dssp EEEEEEES---------CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHH---
T ss_pred EEEEEEcc---------hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHH---
Confidence 99999983 333333 3468999999999999999997753221 00 0123444455544
Q ss_pred CceEEEEEeee
Q 041272 243 DDWICCKFQML 253 (267)
Q Consensus 243 ~~~~~~~~~~~ 253 (267)
.+|+++.....
T Consensus 215 aGf~~~~~~~~ 225 (241)
T 2ex4_A 215 AGLSLLAEERQ 225 (241)
T ss_dssp TTCCEEEEEEC
T ss_pred cCCeEEEeeec
Confidence 56777665544
No 48
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.67 E-value=4.6e-16 Score=130.03 Aligned_cols=109 Identities=17% Similarity=0.254 Sum_probs=88.5
Q ss_pred HhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc
Q 041272 88 WKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI 167 (267)
Q Consensus 88 ~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~ 167 (267)
+...++++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.. ..+++++.++..++
T Consensus 47 l~~~~~~~~~vLDiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~--- 110 (242)
T 3l8d_A 47 FEQYVKKEAEVLDVGCGDGYGTYKLSRT------GYKAVGVDISEVMIQKGKERGE-------GPDLSFIKGDLSSL--- 110 (242)
T ss_dssp HHHHSCTTCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHTTTC-------BTTEEEEECBTTBC---
T ss_pred HHHHcCCCCeEEEEcCCCCHHHHHHHHc------CCeEEEEECCHHHHHHHHhhcc-------cCCceEEEcchhcC---
Confidence 3345678899999999999999999987 3699999999999999998752 36788888766543
Q ss_pred CCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 168 VPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 168 ~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
..++..||+|++. .++++.++...+++++.++|||||++++.++.
T Consensus 111 ~~~~~~fD~v~~~---------~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 111 PFENEQFEAIMAI---------NSLEWTEEPLRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp SSCTTCEEEEEEE---------SCTTSSSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCCCccEEEEc---------ChHhhccCHHHHHHHHHHHhCCCeEEEEEEcC
Confidence 3345689999988 34455566789999999999999999998863
No 49
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.67 E-value=1.3e-15 Score=126.76 Aligned_cols=108 Identities=16% Similarity=0.138 Sum_probs=86.1
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
..++.+|||+|||+|..+..+++..+ +.+|+|+|+|+.+++.|++++... .+++++.++..++ ..+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~----~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~---~~~- 107 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYP----EATFTLVDMSEKMLEIAKNRFRGN------LKVKYIEADYSKY---DFE- 107 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCT----TCEEEEEESCHHHHHHHHHHTCSC------TTEEEEESCTTTC---CCC-
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC----CCeEEEEECCHHHHHHHHHhhccC------CCEEEEeCchhcc---CCC-
Confidence 35678999999999999999999853 589999999999999999987653 3788888766443 222
Q ss_pred CcEEEEEEeCCCCCCCCCceeechh--hHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSE--TTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
..||+|+++. ++++.+ ...++++++.++|||||++++.+...
T Consensus 108 ~~fD~v~~~~---------~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 108 EKYDMVVSAL---------SIHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp SCEEEEEEES---------CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred CCceEEEEeC---------ccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 5899999983 333333 33479999999999999999988644
No 50
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.67 E-value=7.6e-16 Score=130.33 Aligned_cols=109 Identities=14% Similarity=0.141 Sum_probs=90.2
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|++++... .+++++.++..++ ..+
T Consensus 52 ~~~~~~~vLdiG~G~G~~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~---~~~ 117 (266)
T 3ujc_A 52 ELNENSKVLDIGSGLGGGCMYINEKY-----GAHTHGIDICSNIVNMANERVSGN------NKIIFEANDILTK---EFP 117 (266)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHTCCSC------TTEEEEECCTTTC---CCC
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHHHhhcC------CCeEEEECccccC---CCC
Confidence 46688899999999999999999976 369999999999999999987652 5788888766543 334
Q ss_pred CCcEEEEEEeCCCCCCCCCceeech--hhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTS--ETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
+..||+|+++ .++++. ++...+++++.++|||||++++.++..
T Consensus 118 ~~~fD~v~~~---------~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 118 ENNFDLIYSR---------DAILALSLENKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp TTCEEEEEEE---------SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCcEEEEeHH---------HHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 5689999998 345555 788999999999999999999988643
No 51
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.67 E-value=7.4e-16 Score=125.92 Aligned_cols=136 Identities=16% Similarity=0.036 Sum_probs=99.9
Q ss_pred HhhHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChh
Q 041272 83 AANGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHS 162 (267)
Q Consensus 83 ~~~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~ 162 (267)
.....+...++++.+|||+|||+|.++..+++. + ..+|+|+|+|+.+++.|++++..++ ..++++++++..
T Consensus 49 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~-~----~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~ 119 (205)
T 3grz_A 49 LAMLGIERAMVKPLTVADVGTGSGILAIAAHKL-G----AKSVLATDISDESMTAAEENAALNG----IYDIALQKTSLL 119 (205)
T ss_dssp HHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT-T----CSEEEEEESCHHHHHHHHHHHHHTT----CCCCEEEESSTT
T ss_pred HHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC-C----CCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEecccc
Confidence 334444445678899999999999999999875 2 3699999999999999999998877 345888886654
Q ss_pred hhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCC
Q 041272 163 RMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSV 242 (267)
Q Consensus 163 ~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~ 242 (267)
+. . +..||+|+++... .....+++++.++|||||++++..+.. .....+...++.
T Consensus 120 ~~---~--~~~fD~i~~~~~~------------~~~~~~l~~~~~~L~~gG~l~~~~~~~-----~~~~~~~~~~~~--- 174 (205)
T 3grz_A 120 AD---V--DGKFDLIVANILA------------EILLDLIPQLDSHLNEDGQVIFSGIDY-----LQLPKIEQALAE--- 174 (205)
T ss_dssp TT---C--CSCEEEEEEESCH------------HHHHHHGGGSGGGEEEEEEEEEEEEEG-----GGHHHHHHHHHH---
T ss_pred cc---C--CCCceEEEECCcH------------HHHHHHHHHHHHhcCCCCEEEEEecCc-----ccHHHHHHHHHH---
Confidence 32 2 3579999998421 234688999999999999999976632 233444444443
Q ss_pred CceEEEEEee
Q 041272 243 DDWICCKFQM 252 (267)
Q Consensus 243 ~~~~~~~~~~ 252 (267)
.+|++.....
T Consensus 175 ~Gf~~~~~~~ 184 (205)
T 3grz_A 175 NSFQIDLKMR 184 (205)
T ss_dssp TTEEEEEEEE
T ss_pred cCCceEEeec
Confidence 4677666444
No 52
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.67 E-value=2.1e-15 Score=120.04 Aligned_cols=123 Identities=15% Similarity=0.070 Sum_probs=90.7
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++..+ +.+|+|+|+|+.+++.|++++...+ ...++ ++.++..+.. ...
T Consensus 22 ~~~~~~~vldiG~G~G~~~~~l~~~~~----~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~-~~~~d~~~~~--~~~ 91 (178)
T 3hm2_A 22 APKPHETLWDIGGGSGSIAIEWLRSTP----QTTAVCFEISEERRERILSNAINLG---VSDRI-AVQQGAPRAF--DDV 91 (178)
T ss_dssp CCCTTEEEEEESTTTTHHHHHHHTTSS----SEEEEEECSCHHHHHHHHHHHHTTT---CTTSE-EEECCTTGGG--GGC
T ss_pred cccCCCeEEEeCCCCCHHHHHHHHHCC----CCeEEEEeCCHHHHHHHHHHHHHhC---CCCCE-EEecchHhhh--hcc
Confidence 466888999999999999999998853 5899999999999999999998877 23377 6665543211 111
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCC
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLS 241 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~ 241 (267)
...||+|+++... ++ ..+++++.++|||||++++... ..+.......+++...
T Consensus 92 ~~~~D~i~~~~~~---------~~----~~~l~~~~~~L~~gG~l~~~~~-----~~~~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 92 PDNPDVIFIGGGL---------TA----PGVFAAAWKRLPVGGRLVANAV-----TVESEQMLWALRKQFG 144 (178)
T ss_dssp CSCCSEEEECC-T---------TC----TTHHHHHHHTCCTTCEEEEEEC-----SHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEECCcc---------cH----HHHHHHHHHhcCCCCEEEEEee-----ccccHHHHHHHHHHcC
Confidence 2479999987422 11 4799999999999999998776 2234444555555543
No 53
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.67 E-value=6.7e-16 Score=133.62 Aligned_cols=120 Identities=14% Similarity=0.116 Sum_probs=93.1
Q ss_pred hHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhc-cccccccceEEEecChhh
Q 041272 85 NGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKT-TSKAEKGLVKLFNMCHSR 163 (267)
Q Consensus 85 ~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~-~~~~~~~~v~~~~~~~~~ 163 (267)
..+......++.+|||+|||+|..+..+++.++. +.+|+|+|+|+.+++.|+++++.. + ...++++++++..+
T Consensus 27 ~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~~v~~~~~d~~~ 100 (299)
T 3g5t_A 27 KMIDEYHDGERKLLVDVGCGPGTATLQMAQELKP---FEQIIGSDLSATMIKTAEVIKEGSPD---TYKNVSFKISSSDD 100 (299)
T ss_dssp HHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSC---CSEEEEEESCHHHHHHHHHHHHHCC----CCTTEEEEECCTTC
T ss_pred HHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCC---CCEEEEEeCCHHHHHHHHHHHHhccC---CCCceEEEEcCHHh
Confidence 3333333467899999999999999999987522 589999999999999999999875 2 24789999888766
Q ss_pred hhhcC---CCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 164 MEEIV---PKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 164 l~~~~---~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+.... ....+||+|+++ .++++. +...+++++.++|||||++++..+
T Consensus 101 ~~~~~~~~~~~~~fD~V~~~---------~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~ 150 (299)
T 3g5t_A 101 FKFLGADSVDKQKIDMITAV---------ECAHWF-DFEKFQRSAYANLRKDGTIAIWGY 150 (299)
T ss_dssp CGGGCTTTTTSSCEEEEEEE---------SCGGGS-CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCccccccccCCCeeEEeHh---------hHHHHh-CHHHHHHHHHHhcCCCcEEEEEec
Confidence 54211 012589999998 344555 778999999999999999998554
No 54
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.67 E-value=1.4e-15 Score=128.23 Aligned_cols=103 Identities=17% Similarity=0.149 Sum_probs=84.9
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCc
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTA 173 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~ 173 (267)
++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|++++.. .+++++.++..++ ..++..
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~d~~~~---~~~~~~ 108 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHG-----AKKVLGIDLSERMLTEAKRKTTS-------PVVCYEQKAIEDI---AIEPDA 108 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-----CSEEEEEESCHHHHHHHHHHCCC-------TTEEEEECCGGGC---CCCTTC
T ss_pred CCCEEEEECCCCCHHHHHHHHcC-----CCEEEEEECCHHHHHHHHHhhcc-------CCeEEEEcchhhC---CCCCCC
Confidence 78899999999999999999873 13999999999999999998752 5788888776543 334568
Q ss_pred EEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 174 VRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 174 ~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
||+|+++ .++++.++..++++++.++|||||++++.+.
T Consensus 109 fD~v~~~---------~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 109 YNVVLSS---------LALHYIASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp EEEEEEE---------SCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEEc---------hhhhhhhhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 9999998 3455556778999999999999999998754
No 55
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.67 E-value=4.4e-16 Score=130.26 Aligned_cols=121 Identities=11% Similarity=0.101 Sum_probs=89.2
Q ss_pred hHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhh
Q 041272 85 NGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRM 164 (267)
Q Consensus 85 ~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l 164 (267)
..+......++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|+++++..+ .++++++++..++
T Consensus 51 ~~l~~~~~~~~~~vLDiGcGtG~~~~~l~~~~-----~~~v~gvD~s~~~l~~a~~~~~~~~-----~~v~~~~~d~~~~ 120 (236)
T 1zx0_A 51 HALAAAASSKGGRVLEVGFGMAIAASKVQEAP-----IDEHWIIECNDGVFQRLRDWAPRQT-----HKVIPLKGLWEDV 120 (236)
T ss_dssp HHHHHHHTTTCEEEEEECCTTSHHHHHHHTSC-----EEEEEEEECCHHHHHHHHHHGGGCS-----SEEEEEESCHHHH
T ss_pred HHHHhhcCCCCCeEEEEeccCCHHHHHHHhcC-----CCeEEEEcCCHHHHHHHHHHHHhcC-----CCeEEEecCHHHh
Confidence 33333345678899999999999999997652 2589999999999999999887754 5789998887766
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
...+ ++.+||+|+++...+. ....+......+++++.++|||||++++..+
T Consensus 121 ~~~~-~~~~fD~V~~d~~~~~----~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 121 APTL-PDGHFDGILYDTYPLS----EETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp GGGS-CTTCEEEEEECCCCCB----GGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred hccc-CCCceEEEEECCcccc----hhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 4323 3458999999411100 0011234556889999999999999987654
No 56
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.67 E-value=1.1e-15 Score=136.70 Aligned_cols=143 Identities=17% Similarity=0.169 Sum_probs=100.7
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++..++ .+++++..+..+. ..++.
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~------g~~V~gvDis~~al~~A~~n~~~~~-----~~v~~~~~D~~~~---~~~~~ 297 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM------GAEVVGVEDDLASVLSLQKGLEANA-----LKAQALHSDVDEA---LTEEA 297 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT------TCEEEEEESBHHHHHHHHHHHHHTT-----CCCEEEECSTTTT---SCTTC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHHHcC-----CCeEEEEcchhhc---cccCC
Confidence 36789999999999999999987 3699999999999999999999876 2478887665433 33346
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHh---CCCCceEEEE
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARS---LSVDDWICCK 249 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~ 249 (267)
+||+|++|+++.... ........++++++.++|||||++++++..... ....+...+.. +...+|.+.+
T Consensus 298 ~fD~Ii~npp~~~~~----~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~----~~~~l~~~f~~v~~l~~~gF~Vl~ 369 (381)
T 3dmg_A 298 RFDIIVTNPPFHVGG----AVILDVAQAFVNVAAARLRPGGVFFLVSNPFLK----YEPLLEEKFGAFQTLKVAEYKVLF 369 (381)
T ss_dssp CEEEEEECCCCCTTC----SSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSC----HHHHHHHHHSCCEEEEESSSEEEE
T ss_pred CeEEEEECCchhhcc----cccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCC----hHHHHHHhhccEEEEeCCCEEEEE
Confidence 899999997553211 112456779999999999999999998764221 12233333322 2446677766
Q ss_pred EeeecCCC
Q 041272 250 FQMLNRPL 257 (267)
Q Consensus 250 ~~~~~~~~ 257 (267)
....+.++
T Consensus 370 a~~~~~~~ 377 (381)
T 3dmg_A 370 AEKRGRHH 377 (381)
T ss_dssp EECC----
T ss_pred EEEecccc
Confidence 55555443
No 57
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.67 E-value=8.7e-16 Score=131.97 Aligned_cols=105 Identities=11% Similarity=0.077 Sum_probs=86.3
Q ss_pred hhcCCCCEEEEecCCCChHHH-HHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcC
Q 041272 90 HVVRKGDTVVDATCGNGYDTL-MMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIV 168 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~-~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 168 (267)
..++++++|||||||+|.++. .+|+.. +++|+|||+|++|++.|++++++.+ . .++++++++..++.
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~-----ga~V~gIDis~~~l~~Ar~~~~~~g---l-~~v~~v~gDa~~l~--- 185 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVY-----GMRVNVVEIEPDIAELSRKVIEGLG---V-DGVNVITGDETVID--- 185 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTT-----CCEEEEEESSHHHHHHHHHHHHHHT---C-CSEEEEESCGGGGG---
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHcc-----CCEEEEEECCHHHHHHHHHHHHhcC---C-CCeEEEECchhhCC---
Confidence 467899999999999997764 455542 5899999999999999999999877 3 79999998886653
Q ss_pred CCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 169 PKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+..||+|+.+.. .+++.++++++.++|||||++++...
T Consensus 186 --d~~FDvV~~~a~------------~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 186 --GLEFDVLMVAAL------------AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp --GCCCSEEEECTT------------CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred --CCCcCEEEECCC------------ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 347999988632 24557999999999999999998775
No 58
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.67 E-value=2.5e-16 Score=135.28 Aligned_cols=108 Identities=16% Similarity=0.120 Sum_probs=88.0
Q ss_pred hhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcC
Q 041272 89 KHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIV 168 (267)
Q Consensus 89 ~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 168 (267)
...++++.+|||+|||+|.++..+|+... .+|+|+|+|+.+++.|++|++.++ ...+++++++|..++..
T Consensus 120 ~~~~~~~~~VLDlgcG~G~~~~~la~~~~-----~~V~~vD~s~~~~~~a~~n~~~n~---~~~~v~~~~~D~~~~~~-- 189 (278)
T 2frn_A 120 AKVAKPDELVVDMFAGIGHLSLPIAVYGK-----AKVIAIEKDPYTFKFLVENIHLNK---VEDRMSAYNMDNRDFPG-- 189 (278)
T ss_dssp HHHCCTTCEEEETTCTTTTTHHHHHHHTC-----CEEEEECCCHHHHHHHHHHHHHTT---CTTTEEEECSCTTTCCC--
T ss_pred HHhCCCCCEEEEecccCCHHHHHHHHhCC-----CEEEEEECCHHHHHHHHHHHHHcC---CCceEEEEECCHHHhcc--
Confidence 33467899999999999999999998731 379999999999999999999887 34568999877655433
Q ss_pred CCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 169 PKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
+..||+|+++++. ...++++++.++|||||++++..+.
T Consensus 190 --~~~fD~Vi~~~p~-------------~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 190 --ENIADRILMGYVV-------------RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp --CSCEEEEEECCCS-------------SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred --cCCccEEEECCch-------------hHHHHHHHHHHHCCCCeEEEEEEee
Confidence 4589999998542 1147889999999999999998775
No 59
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.66 E-value=6.9e-15 Score=118.01 Aligned_cols=122 Identities=24% Similarity=0.231 Sum_probs=93.1
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.|++++..++ ...+++++.++..+. ++.
T Consensus 30 ~~~~~~~vldiG~G~G~~~~~l~~~~------~~v~~~D~~~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~---~~~ 97 (192)
T 1l3i_A 30 EPGKNDVAVDVGCGTGGVTLELAGRV------RRVYAIDRNPEAISTTEMNLQRHG---LGDNVTLMEGDAPEA---LCK 97 (192)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHTTS------SEEEEEESCHHHHHHHHHHHHHTT---CCTTEEEEESCHHHH---HTT
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhc------CEEEEEECCHHHHHHHHHHHHHcC---CCcceEEEecCHHHh---ccc
Confidence 46788999999999999999999873 689999999999999999998876 236888888766542 122
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCC
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLS 241 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~ 241 (267)
...||+|+++... .....+++++.++|+|||++++..+. ......+..+++...
T Consensus 98 ~~~~D~v~~~~~~------------~~~~~~l~~~~~~l~~gG~l~~~~~~-----~~~~~~~~~~l~~~g 151 (192)
T 1l3i_A 98 IPDIDIAVVGGSG------------GELQEILRIIKDKLKPGGRIIVTAIL-----LETKFEAMECLRDLG 151 (192)
T ss_dssp SCCEEEEEESCCT------------TCHHHHHHHHHHTEEEEEEEEEEECB-----HHHHHHHHHHHHHTT
T ss_pred CCCCCEEEECCch------------HHHHHHHHHHHHhcCCCcEEEEEecC-----cchHHHHHHHHHHCC
Confidence 1379999987321 22368999999999999999987762 334445555565544
No 60
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.66 E-value=9.3e-16 Score=126.53 Aligned_cols=138 Identities=15% Similarity=0.229 Sum_probs=97.7
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcC-CC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIV-PK 170 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~~ 170 (267)
..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++ .++.++..+..++.... ..
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~~~ 113 (227)
T 3e8s_A 50 GRQPERVLDLGCGEGWLLRALADR------GIEAVGVDGDRTLVDAARAA----------GAGEVHLASYAQLAEAKVPV 113 (227)
T ss_dssp HTCCSEEEEETCTTCHHHHHHHTT------TCEEEEEESCHHHHHHHHHT----------CSSCEEECCHHHHHTTCSCC
T ss_pred cCCCCEEEEeCCCCCHHHHHHHHC------CCEEEEEcCCHHHHHHHHHh----------cccccchhhHHhhccccccc
Confidence 346789999999999999999987 36999999999999999986 24556666666664332 33
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChh----------------------
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGRE---------------------- 228 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~---------------------- 228 (267)
+..||+|+++... + ..+...+++++.++|||||++++.++........
T Consensus 114 ~~~fD~v~~~~~l---------~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (227)
T 3e8s_A 114 GKDYDLICANFAL---------L-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMP 183 (227)
T ss_dssp CCCEEEEEEESCC---------C-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEE
T ss_pred CCCccEEEECchh---------h-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccce
Confidence 4469999998432 2 3445699999999999999999987633211100
Q ss_pred -hHHHHHHHHHhCCCCceEEEEEeeecC
Q 041272 229 -ELEAVEAFARSLSVDDWICCKFQMLNR 255 (267)
Q Consensus 229 -~~~~~~~~~~~l~~~~~~~~~~~~~~~ 255 (267)
.......+.+.+...+|.++.......
T Consensus 184 ~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 211 (227)
T 3e8s_A 184 WYFRTLASWLNALDMAGLRLVSLQEPQH 211 (227)
T ss_dssp EEECCHHHHHHHHHHTTEEEEEEECCCC
T ss_pred EEEecHHHHHHHHHHcCCeEEEEecCCC
Confidence 001234455555567899888766433
No 61
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.66 E-value=2.2e-15 Score=119.28 Aligned_cols=132 Identities=18% Similarity=0.218 Sum_probs=96.8
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.|+++ ..+++++.++ ...+
T Consensus 14 ~~~~~~~vLDiG~G~G~~~~~l~~~~------~~v~~vD~s~~~~~~a~~~---------~~~v~~~~~d------~~~~ 72 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGNGFYCKYLLEFA------TKLYCIDINVIALKEVKEK---------FDSVITLSDP------KEIP 72 (170)
T ss_dssp HSSCCEEEEEETCTTCTTHHHHHTTE------EEEEEECSCHHHHHHHHHH---------CTTSEEESSG------GGSC
T ss_pred CcCCCCeEEEECCCCCHHHHHHHhhc------CeEEEEeCCHHHHHHHHHh---------CCCcEEEeCC------CCCC
Confidence 46788899999999999999999874 5899999999999999987 1467888755 1223
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCCh----hhHHHHHHHHHhCCCCceE
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGR----EELEAVEAFARSLSVDDWI 246 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~ 246 (267)
+..||+|+++. +.++.++...+++++.++|||||++++.++....... ........+.+.+. +|+
T Consensus 73 ~~~~D~v~~~~---------~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~ 141 (170)
T 3i9f_A 73 DNSVDFILFAN---------SFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFV 141 (170)
T ss_dssp TTCEEEEEEES---------CSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEE
T ss_pred CCceEEEEEcc---------chhcccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcE
Confidence 45799999883 4444456789999999999999999998875432111 11111233444444 898
Q ss_pred EEEEeeec
Q 041272 247 CCKFQMLN 254 (267)
Q Consensus 247 ~~~~~~~~ 254 (267)
++......
T Consensus 142 ~~~~~~~~ 149 (170)
T 3i9f_A 142 VEKRFNPT 149 (170)
T ss_dssp EEEEECSS
T ss_pred EEEccCCC
Confidence 88766654
No 62
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.66 E-value=2e-14 Score=114.56 Aligned_cols=117 Identities=18% Similarity=0.137 Sum_probs=90.3
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|+++++.++ ..+++++.++..+. .+
T Consensus 32 ~~~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~---~~- 97 (183)
T 2yxd_A 32 NLNKDDVVVDVGCGSGGMTVEIAKR------CKFVYAIDYLDGAIEVTKQNLAKFN----IKNCQIIKGRAEDV---LD- 97 (183)
T ss_dssp CCCTTCEEEEESCCCSHHHHHHHTT------SSEEEEEECSHHHHHHHHHHHHHTT----CCSEEEEESCHHHH---GG-
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHhc------CCeEEEEeCCHHHHHHHHHHHHHcC----CCcEEEEECCcccc---cc-
Confidence 4567889999999999999999982 4799999999999999999998877 46799988776552 22
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCC
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLS 241 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~ 241 (267)
+..||+|+++.. .....+++++.++ |||.+++... .......+.+.++...
T Consensus 98 ~~~~D~i~~~~~-------------~~~~~~l~~~~~~--~gG~l~~~~~-----~~~~~~~~~~~l~~~g 148 (183)
T 2yxd_A 98 KLEFNKAFIGGT-------------KNIEKIIEILDKK--KINHIVANTI-----VLENAAKIINEFESRG 148 (183)
T ss_dssp GCCCSEEEECSC-------------SCHHHHHHHHHHT--TCCEEEEEES-----CHHHHHHHHHHHHHTT
T ss_pred CCCCcEEEECCc-------------ccHHHHHHHHhhC--CCCEEEEEec-----ccccHHHHHHHHHHcC
Confidence 247999999843 3346889999888 9999998875 2334444555555544
No 63
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.66 E-value=7.7e-16 Score=129.61 Aligned_cols=138 Identities=15% Similarity=0.170 Sum_probs=100.8
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC--
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP-- 169 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-- 169 (267)
+.++.+|||+|||+|..+..+|+.++. +++|+++|+++++++.|+++++..+ ...+++++.++..+......
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~---~~~v~~iD~~~~~~~~a~~~~~~~g---~~~~i~~~~gda~~~l~~~~~~ 131 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPD---DGQVITCDINEGWTKHAHPYWREAK---QEHKIKLRLGPALDTLHSLLNE 131 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCT---TCEEEEEECCCSSCCCSHHHHHHTT---CTTTEEEEESCHHHHHHHHHHH
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHHHhhc
Confidence 346779999999999999999998753 5899999999999999999999877 44689999988865543221
Q ss_pred -CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec--CC----CCChhhHHHHHHHHHhCCC
Q 041272 170 -KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV--GH----PGGREELEAVEAFARSLSV 242 (267)
Q Consensus 170 -~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~--~~----~~~~~~~~~~~~~~~~l~~ 242 (267)
...+||+|+.+.. ......+++++.++|||||++++.... +. .........+.++.+.+..
T Consensus 132 ~~~~~fD~V~~d~~------------~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~ 199 (242)
T 3r3h_A 132 GGEHQFDFIFIDAD------------KTNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKN 199 (242)
T ss_dssp HCSSCEEEEEEESC------------GGGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHT
T ss_pred cCCCCEeEEEEcCC------------hHHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhh
Confidence 0247999999832 345568999999999999999885432 21 1122233456666665543
Q ss_pred C-ceEE
Q 041272 243 D-DWIC 247 (267)
Q Consensus 243 ~-~~~~ 247 (267)
. .+..
T Consensus 200 ~~~~~~ 205 (242)
T 3r3h_A 200 DSRVFV 205 (242)
T ss_dssp CCSEEE
T ss_pred CCCEEE
Confidence 3 3443
No 64
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.66 E-value=1.9e-15 Score=125.03 Aligned_cols=110 Identities=17% Similarity=0.225 Sum_probs=88.1
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
..++++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|++++...+ .+++++.++..++ ..
T Consensus 34 ~~~~~~~~vLDlG~G~G~~~~~l~~~~------~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~---~~ 99 (227)
T 1ve3_A 34 KYMKKRGKVLDLACGVGGFSFLLEDYG------FEVVGVDISEDMIRKAREYAKSRE-----SNVEFIVGDARKL---SF 99 (227)
T ss_dssp HSCCSCCEEEEETCTTSHHHHHHHHTT------CEEEEEESCHHHHHHHHHHHHHTT-----CCCEEEECCTTSC---CS
T ss_pred HhcCCCCeEEEEeccCCHHHHHHHHcC------CEEEEEECCHHHHHHHHHHHHhcC-----CCceEEECchhcC---CC
Confidence 345678899999999999999999872 489999999999999999987754 5788888766443 22
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
++.+||+|+++... ..++..+..++++++.++|||||++++...
T Consensus 100 ~~~~~D~v~~~~~~-------~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 100 EDKTFDYVIFIDSI-------VHFEPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp CTTCEEEEEEESCG-------GGCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcEEEEEEcCch-------HhCCHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 34579999998320 034456778999999999999999998765
No 65
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.66 E-value=6.9e-16 Score=137.88 Aligned_cols=148 Identities=16% Similarity=0.109 Sum_probs=100.1
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|.++..+++.. |+.+|+|+|+|+.+++.|++++..++.. ...+++++..+..+ .. ++.
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~----p~~~V~gvD~s~~al~~Ar~n~~~ngl~-~~~~v~~~~~D~~~---~~-~~~ 291 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKN----PQAKVVFVDESPMAVASSRLNVETNMPE-ALDRCEFMINNALS---GV-EPF 291 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHC----TTCEEEEEESCHHHHHHHHHHHHHHCGG-GGGGEEEEECSTTT---TC-CTT
T ss_pred cCCCeEEEEeCcchHHHHHHHHHC----CCCEEEEEECcHHHHHHHHHHHHHcCCC-cCceEEEEechhhc---cC-CCC
Confidence 456899999999999999999985 3589999999999999999999987710 01257778766543 22 245
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHh----CCCCceEEE
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARS----LSVDDWICC 248 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~ 248 (267)
.||+|++|+++..... .......++++++.++|||||++++++.... +. ...+.+.+.. ....+|.+.
T Consensus 292 ~fD~Ii~nppfh~~~~----~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~--~~--~~~l~~~fg~~~~~a~~~~F~V~ 363 (375)
T 4dcm_A 292 RFNAVLCNPPFHQQHA----LTDNVAWEMFHHARRCLKINGELYIVANRHL--DY--FHKLKKIFGNCTTIATNNKFVVL 363 (375)
T ss_dssp CEEEEEECCCC-----------CCHHHHHHHHHHHHEEEEEEEEEEEETTS--CH--HHHHHHHHSCCEEEEECSSEEEE
T ss_pred CeeEEEECCCcccCcc----cCHHHHHHHHHHHHHhCCCCcEEEEEEECCc--CH--HHHHHHhcCCEEEEeeCCCEEEE
Confidence 8999999976532110 1122335789999999999999999876322 11 2333343332 223567877
Q ss_pred EEeeecCCC
Q 041272 249 KFQMLNRPL 257 (267)
Q Consensus 249 ~~~~~~~~~ 257 (267)
+..+.++.+
T Consensus 364 ~~~~~~~~~ 372 (375)
T 4dcm_A 364 KAVKLEHHH 372 (375)
T ss_dssp EEECCC---
T ss_pred EEcCccccc
Confidence 777766543
No 66
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.66 E-value=2e-15 Score=119.25 Aligned_cols=109 Identities=11% Similarity=0.032 Sum_probs=84.1
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh-cCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE-IVPK 170 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~-~~~~ 170 (267)
++++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|++++..++ . ++++++++..+... ....
T Consensus 39 ~~~~~~vLD~GcG~G~~~~~l~~~~------~~v~~vD~~~~~~~~a~~~~~~~~----~-~~~~~~~d~~~~~~~~~~~ 107 (171)
T 1ws6_A 39 YPRRGRFLDPFAGSGAVGLEAASEG------WEAVLVEKDPEAVRLLKENVRRTG----L-GARVVALPVEVFLPEAKAQ 107 (171)
T ss_dssp CTTCCEEEEETCSSCHHHHHHHHTT------CEEEEECCCHHHHHHHHHHHHHHT----C-CCEEECSCHHHHHHHHHHT
T ss_pred ccCCCeEEEeCCCcCHHHHHHHHCC------CeEEEEeCCHHHHHHHHHHHHHcC----C-ceEEEeccHHHHHHhhhcc
Confidence 4478899999999999999999872 459999999999999999998876 3 88999888776432 2222
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHH--hcccCCcEEEEEEecC
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAE--RILIPGGLISMVVYVG 222 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~--~~LkpgG~l~i~~~~~ 222 (267)
+.+||+|+++.++. .+ ..++++.+. ++|||||++++.+...
T Consensus 108 ~~~~D~i~~~~~~~--~~---------~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 108 GERFTVAFMAPPYA--MD---------LAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp TCCEEEEEECCCTT--SC---------TTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCceEEEEECCCCc--hh---------HHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 23699999996553 11 124555555 9999999999888743
No 67
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.65 E-value=3.6e-15 Score=126.39 Aligned_cols=134 Identities=18% Similarity=0.204 Sum_probs=98.5
Q ss_pred hhHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh
Q 041272 84 ANGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR 163 (267)
Q Consensus 84 ~~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~ 163 (267)
....+...++++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|++++..++ .. ++++.++..+
T Consensus 110 ~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~------g~~v~gvDi~~~~v~~a~~n~~~~~----~~-v~~~~~d~~~ 178 (254)
T 2nxc_A 110 ALKALARHLRPGDKVLDLGTGSGVLAIAAEKL------GGKALGVDIDPMVLPQAEANAKRNG----VR-PRFLEGSLEA 178 (254)
T ss_dssp HHHHHHHHCCTTCEEEEETCTTSHHHHHHHHT------TCEEEEEESCGGGHHHHHHHHHHTT----CC-CEEEESCHHH
T ss_pred HHHHHHHhcCCCCEEEEecCCCcHHHHHHHHh------CCeEEEEECCHHHHHHHHHHHHHcC----Cc-EEEEECChhh
Confidence 33344444778899999999999999999886 3499999999999999999999877 23 7888766654
Q ss_pred hhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCC
Q 041272 164 MEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVD 243 (267)
Q Consensus 164 l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 243 (267)
. ++ +.+||+|+++.. ......+++++.++|||||+++++.... .....+...++. .
T Consensus 179 ~---~~-~~~fD~Vv~n~~------------~~~~~~~l~~~~~~LkpgG~lils~~~~-----~~~~~v~~~l~~---~ 234 (254)
T 2nxc_A 179 A---LP-FGPFDLLVANLY------------AELHAALAPRYREALVPGGRALLTGILK-----DRAPLVREAMAG---A 234 (254)
T ss_dssp H---GG-GCCEEEEEEECC------------HHHHHHHHHHHHHHEEEEEEEEEEEEEG-----GGHHHHHHHHHH---T
T ss_pred c---Cc-CCCCCEEEECCc------------HHHHHHHHHHHHHHcCCCCEEEEEeecc-----CCHHHHHHHHHH---C
Confidence 2 21 247999999841 1234689999999999999999987632 233444444443 5
Q ss_pred ceEEEEEee
Q 041272 244 DWICCKFQM 252 (267)
Q Consensus 244 ~~~~~~~~~ 252 (267)
+|.+.....
T Consensus 235 Gf~~~~~~~ 243 (254)
T 2nxc_A 235 GFRPLEEAA 243 (254)
T ss_dssp TCEEEEEEE
T ss_pred CCEEEEEec
Confidence 677766544
No 68
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.65 E-value=2.2e-16 Score=129.22 Aligned_cols=119 Identities=13% Similarity=0.132 Sum_probs=68.6
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc-CCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI-VPKS 171 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~-~~~~ 171 (267)
.++.+|||+|||+|.++..+++..+ +.+|+|+|+|+.+++.|++++..++ . +++++++|..+.... ....
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~----~~~v~~vD~~~~~~~~a~~~~~~~~----~-~~~~~~~d~~~~~~~~~~~~ 99 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACP----GVSVTAVDLSMDALAVARRNAERFG----A-VVDWAAADGIEWLIERAERG 99 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCT----TEEEEEEECC------------------------CCHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCC----CCeEEEEECCHHHHHHHHHHHHHhC----C-ceEEEEcchHhhhhhhhhcc
Confidence 6788999999999999999999853 4799999999999999999998866 2 777777655442111 0012
Q ss_pred CcEEEEEEeCCCCCCCCCceeec-----------------hhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITT-----------------SETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~-----------------~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+||+|++|++|.+..+...... ......+++++.++|||||++++...
T Consensus 100 ~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 100 RPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp CCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred CcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 47999999988865543221110 11127889999999999999545444
No 69
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.65 E-value=8.4e-16 Score=127.66 Aligned_cols=107 Identities=18% Similarity=0.177 Sum_probs=87.5
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccc-cceEEEecChhhhhhcCCCCC
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEK-GLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~~ 172 (267)
++.+|||+|||+|..+..+|+.+++ +++|+++|+++++++.|+++++..+ .. .+++++.++..+....+. +.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~g---~~~~~i~~~~gda~~~l~~~~-~~ 128 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLAD---NTTLTCIDPESEHQRQAKALFREAG---YSPSRVRFLLSRPLDVMSRLA-ND 128 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCT---TSEEEEECSCHHHHHHHHHHHHHTT---CCGGGEEEECSCHHHHGGGSC-TT
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcC---CCcCcEEEEEcCHHHHHHHhc-CC
Confidence 3459999999999999999998754 6899999999999999999999877 34 589999988876654332 34
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
+||+|+.+.. ......+++++.++|||||++++..
T Consensus 129 ~fD~V~~d~~------------~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 129 SYQLVFGQVS------------PMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CEEEEEECCC------------TTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred CcCeEEEcCc------------HHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 7999998832 2344679999999999999998743
No 70
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.65 E-value=7.7e-16 Score=125.45 Aligned_cols=131 Identities=13% Similarity=0.064 Sum_probs=97.3
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCcE
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTAV 174 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~ 174 (267)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++. .+++++.++..++. .++..|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~---~~~~~f 103 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL------GHQIEGLEPATRLVELARQTH---------PSVTFHHGTITDLS---DSPKRW 103 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT------TCCEEEECCCHHHHHHHHHHC---------TTSEEECCCGGGGG---GSCCCE
T ss_pred CCeEEEecCCCCHHHHHHHhc------CCeEEEEeCCHHHHHHHHHhC---------CCCeEEeCcccccc---cCCCCe
Confidence 789999999999999999987 368999999999999999862 46888887766543 234589
Q ss_pred EEEEEeCCCCCCCCCceeech--hhHHHHHHHHHhcccCCcEEEEEEecCCCCC----------hhhHHHHHHHHHhCCC
Q 041272 175 RLVAFNLGYLPGGDKSVITTS--ETTKMALEAAERILIPGGLISMVVYVGHPGG----------REELEAVEAFARSLSV 242 (267)
Q Consensus 175 d~ii~~~~~lp~~d~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~----------~~~~~~~~~~~~~l~~ 242 (267)
|+|+++. ++++. ++...+++++.++|||||++++.++...... ......+..+++ .
T Consensus 104 D~v~~~~---------~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~ 171 (203)
T 3h2b_A 104 AGLLAWY---------SLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALE---T 171 (203)
T ss_dssp EEEEEES---------SSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHH---H
T ss_pred EEEEehh---------hHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHH---H
Confidence 9999973 22222 4678999999999999999999886443210 012334444444 4
Q ss_pred CceEEEEEeeecC
Q 041272 243 DDWICCKFQMLNR 255 (267)
Q Consensus 243 ~~~~~~~~~~~~~ 255 (267)
.+|+++.......
T Consensus 172 ~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 172 AGFQVTSSHWDPR 184 (203)
T ss_dssp TTEEEEEEEECTT
T ss_pred CCCcEEEEEecCC
Confidence 6799888777655
No 71
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.65 E-value=2.9e-16 Score=131.33 Aligned_cols=102 Identities=11% Similarity=0.079 Sum_probs=84.6
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++... ++++++++..++ ..+.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~--------~v~~~~~d~~~~----~~~~ 102 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEH------FNDITCVEASEEAISHAQGRLKD--------GITYIHSRFEDA----QLPR 102 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTT------CSCEEEEESCHHHHHHHHHHSCS--------CEEEEESCGGGC----CCSS
T ss_pred cCCCcEEEECCCCCHHHHHHHHh------CCcEEEEeCCHHHHHHHHHhhhC--------CeEEEEccHHHc----CcCC
Confidence 46779999999999999999987 35899999999999999987532 688888776554 2355
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHH-hcccCCcEEEEEEec
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAE-RILIPGGLISMVVYV 221 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~-~~LkpgG~l~i~~~~ 221 (267)
+||+|++. .++++.++..++++++. ++|||||++++.++.
T Consensus 103 ~fD~v~~~---------~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 103 RYDNIVLT---------HVLEHIDDPVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp CEEEEEEE---------SCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred cccEEEEh---------hHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 89999998 45666667789999999 999999999998864
No 72
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.65 E-value=5.3e-15 Score=123.55 Aligned_cols=115 Identities=16% Similarity=0.105 Sum_probs=88.1
Q ss_pred HhhHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChh
Q 041272 83 AANGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHS 162 (267)
Q Consensus 83 ~~~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~ 162 (267)
....++.....++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...+ .++.++.++..
T Consensus 26 ~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~------~~~~~~~D~s~~~~~~a~~~~~~~~-----~~~~~~~~d~~ 94 (246)
T 1y8c_A 26 FIIEKCVENNLVFDDYLDLACGTGNLTENLCPK------FKNTWAVDLSQEMLSEAENKFRSQG-----LKPRLACQDIS 94 (246)
T ss_dssp HHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG------SSEEEEECSCHHHHHHHHHHHHHTT-----CCCEEECCCGG
T ss_pred HHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC------CCcEEEEECCHHHHHHHHHHHhhcC-----CCeEEEecccc
Confidence 333333333347789999999999999999987 3689999999999999999988755 27888886664
Q ss_pred hhhhcCCCCCcEEEEEEeCCCCCCCCCceeech---hhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 163 RMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTS---ETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 163 ~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~---~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
++. .+ ..||+|+++.. ++++. ++..++++++.++|||||++++...
T Consensus 95 ~~~---~~-~~fD~v~~~~~--------~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 95 NLN---IN-RKFDLITCCLD--------STNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp GCC---CS-CCEEEEEECTT--------GGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCC---cc-CCceEEEEcCc--------cccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 432 22 57999998720 33322 6778999999999999999998554
No 73
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.65 E-value=1.2e-15 Score=130.29 Aligned_cols=109 Identities=21% Similarity=0.317 Sum_probs=91.2
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||+|||+|.++..+++.. |+.+|+|+|+|+.+++.|++++...+ ..+++++..+..++ ..++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~----~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~---~~~~ 103 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNN----PDAEITSIDISPESLEKARENTEKNG----IKNVKFLQANIFSL---PFED 103 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHC----TTSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCGGGC---CSCT
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC----CCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEcccccC---CCCC
Confidence 4688999999999999999999984 35899999999999999999998876 46799988766543 3345
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+||+|+++ .++++.++...+++++.++|||||++++.+.
T Consensus 104 ~~fD~v~~~---------~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 104 SSFDHIFVC---------FVLEHLQSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp TCEEEEEEE---------SCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEEe---------chhhhcCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 689999998 3555556667999999999999999999764
No 74
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.65 E-value=1.2e-15 Score=129.18 Aligned_cols=113 Identities=11% Similarity=0.080 Sum_probs=82.6
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhh----------cccc---ccccceEEEec
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDK----------TTSK---AEKGLVKLFNM 159 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~----------~~~~---~~~~~v~~~~~ 159 (267)
.++.+|||+|||+|..+..||+. +.+|+|||+|+.|++.|+++... .+.. ....+++++++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~------G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 140 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR------GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCC 140 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT------TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC------CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEEC
Confidence 57889999999999999999987 46999999999999999876541 0000 01257899988
Q ss_pred ChhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 160 CHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 160 ~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
|..++... ...+||+|+....+.. ...+....+++++.++|||||++++++.
T Consensus 141 D~~~l~~~--~~~~FD~V~~~~~l~~-------l~~~~~~~~l~~~~~~LkpGG~l~l~~~ 192 (252)
T 2gb4_A 141 SIFDLPRA--NIGKFDRIWDRGALVA-------INPGDHDRYADIILSLLRKEFQYLVAVL 192 (252)
T ss_dssp CTTTGGGG--CCCCEEEEEESSSTTT-------SCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccccCCcc--cCCCEEEEEEhhhhhh-------CCHHHHHHHHHHHHHHcCCCeEEEEEEE
Confidence 77665432 1247999997632100 1234567899999999999999976543
No 75
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.65 E-value=2.4e-15 Score=123.29 Aligned_cols=103 Identities=13% Similarity=0.055 Sum_probs=82.2
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|++++...+ ..+++++.++..+. ...
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~la~~------~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~---~~~ 140 (210)
T 3lbf_A 74 ELTPQSRVLEIGTGSGYQTAILAHL------VQHVCSVERIKGLQWQARRRLKNLD----LHNVSTRHGDGWQG---WQA 140 (210)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH------SSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCGGGC---CGG
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHh------CCEEEEEecCHHHHHHHHHHHHHcC----CCceEEEECCcccC---Ccc
Confidence 4678899999999999999999998 3799999999999999999998877 45799988766442 223
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
+..||+|+++... ++. .+++.++|||||++++....
T Consensus 141 ~~~~D~i~~~~~~---------~~~------~~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 141 RAPFDAIIVTAAP---------PEI------PTALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GCCEEEEEESSBC---------SSC------CTHHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEEccch---------hhh------hHHHHHhcccCcEEEEEEcC
Confidence 4579999997321 111 12578999999999998764
No 76
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.65 E-value=1.8e-15 Score=125.29 Aligned_cols=112 Identities=13% Similarity=0.175 Sum_probs=88.1
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC--
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK-- 170 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~-- 170 (267)
.++.+|||+|||+|..+..+|+.++. +++|+++|+++.+++.|+++++..+ ...+++++.++..+.......
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~l~~~~~~~ 130 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQP---GARLLTMEINPDCAAITQQMLNFAG---LQDKVTILNGASQDLIPQLKKKY 130 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCT---TCEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEESCHHHHGGGTTTTS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCC---CCEEEEEeCChHHHHHHHHHHHHcC---CCCceEEEECCHHHHHHHHHHhc
Confidence 46789999999999999999997653 5899999999999999999999877 456799999887665443321
Q ss_pred -CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 171 -STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 171 -~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
...||+|+.+. ..+......++++.+ ++|||||++++...
T Consensus 131 ~~~~fD~V~~d~---------~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 131 DVDTLDMVFLDH---------WKDRYLPDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp CCCCCSEEEECS---------CGGGHHHHHHHHHHT-TCCCTTCEEEESCC
T ss_pred CCCceEEEEEcC---------CcccchHHHHHHHhc-cccCCCeEEEEeCC
Confidence 14799999883 223344445677777 99999999987655
No 77
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.65 E-value=1.1e-14 Score=117.02 Aligned_cols=108 Identities=18% Similarity=0.190 Sum_probs=87.3
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccc--eEEEecChhhhhhcCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGL--VKLFNMCHSRMEEIVP 169 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~--v~~~~~~~~~l~~~~~ 169 (267)
+.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|++++...+ ..+ ++++.++..+. ..
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~~~~~------~~~v~~~D~~~~~~~~a~~~~~~~~----~~~~~~~~~~~d~~~~---~~ 116 (194)
T 1dus_A 50 VDKDDDILDLGCGYGVIGIALADE------VKSTTMADINRRAIKLAKENIKLNN----LDNYDIRVVHSDLYEN---VK 116 (194)
T ss_dssp CCTTCEEEEETCTTSHHHHHHGGG------SSEEEEEESCHHHHHHHHHHHHHTT----CTTSCEEEEECSTTTT---CT
T ss_pred cCCCCeEEEeCCCCCHHHHHHHHc------CCeEEEEECCHHHHHHHHHHHHHcC----CCccceEEEECchhcc---cc
Confidence 457889999999999999999987 3799999999999999999998866 344 88888665432 22
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
+..||+|+++.++. +.......+++++.++|||||++++.+..
T Consensus 117 -~~~~D~v~~~~~~~--------~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 117 -DRKYNKIITNPPIR--------AGKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp -TSCEEEEEECCCST--------TCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred -cCCceEEEECCCcc--------cchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 45799999985331 12456678999999999999999998874
No 78
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.65 E-value=3.1e-16 Score=130.61 Aligned_cols=117 Identities=9% Similarity=0.046 Sum_probs=84.8
Q ss_pred hhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCC-hHHHHHH---HHHHhhccccccccceEEEecChhhh
Q 041272 89 KHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQ-SEALKST---SSLLDKTTSKAEKGLVKLFNMCHSRM 164 (267)
Q Consensus 89 ~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s-~~~i~~a---~~~~~~~~~~~~~~~v~~~~~~~~~l 164 (267)
....+++.+|||||||+|.++..+++.. |+.+|+|||+| +.|++.| ++++.+.+ ..++.+++++..++
T Consensus 19 ~~~~~~~~~vLDiGCG~G~~~~~la~~~----~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~----~~~v~~~~~d~~~l 90 (225)
T 3p2e_A 19 EIIGQFDRVHIDLGTGDGRNIYKLAIND----QNTFYIGIDPVKENLFDISKKIIKKPSKGG----LSNVVFVIAAAESL 90 (225)
T ss_dssp HHHTTCSEEEEEETCTTSHHHHHHHHTC----TTEEEEEECSCCGGGHHHHHHHTSCGGGTC----CSSEEEECCBTTBC
T ss_pred HHhCCCCCEEEEEeccCcHHHHHHHHhC----CCCEEEEEeCCHHHHHHHHHHHHHHHHHcC----CCCeEEEEcCHHHh
Confidence 3345688899999999999999999763 36899999999 6777666 88877766 56899998887776
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
..... ..+|.+.+++++ .. ...+.......+++++.++|||||++++..
T Consensus 91 ~~~~~--d~v~~i~~~~~~---~~-~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 91 PFELK--NIADSISILFPW---GT-LLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp CGGGT--TCEEEEEEESCC---HH-HHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhcc--CeEEEEEEeCCC---cH-HhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 43222 368888887532 10 001111223578999999999999999833
No 79
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.65 E-value=1.9e-15 Score=129.54 Aligned_cols=141 Identities=11% Similarity=0.105 Sum_probs=101.2
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcC-C
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIV-P 169 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~ 169 (267)
.++++.+|||+|||+|..+..+++.++. .++|+|+|+++.+++.++++++..+ ..+++++.+|..++.... .
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~---~~~v~avD~~~~~l~~~~~~~~~~g----~~~v~~~~~D~~~~~~~~~~ 152 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKN---KGTIVAVEISKTRTKALKSNINRMG----VLNTIIINADMRKYKDYLLK 152 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTT---CSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCHHHHHHHHHH
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCC---CCEEEEECCCHHHHHHHHHHHHHhC----CCcEEEEeCChHhcchhhhh
Confidence 3568899999999999999999997642 3799999999999999999999877 458999998877664321 0
Q ss_pred CCCcEEEEEEeCCCCCCCC---------CceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhC
Q 041272 170 KSTAVRLVAFNLGYLPGGD---------KSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSL 240 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d---------~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l 240 (267)
....||.|++++++....- ..+........++++++.++|||||+++++++.-+.. +....+..+++..
T Consensus 153 ~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~--ene~~v~~~l~~~ 230 (274)
T 3ajd_A 153 NEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVE--ENEEVIKYILQKR 230 (274)
T ss_dssp TTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTT--SSHHHHHHHHHHC
T ss_pred ccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChH--HhHHHHHHHHHhC
Confidence 1347999999976532110 0001112445789999999999999999887643332 2234556666543
No 80
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.64 E-value=6.8e-15 Score=123.79 Aligned_cols=106 Identities=13% Similarity=0.069 Sum_probs=85.8
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
..++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|++++... .++++++++..++ ..++
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~---~~~~ 156 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKL-----YATTDLLEPVKHMLEEAKRELAGM------PVGKFILASMETA---TLPP 156 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHH-----CSEEEEEESCHHHHHHHHHHTTTS------SEEEEEESCGGGC---CCCS
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhh-----cCEEEEEeCCHHHHHHHHHHhccC------CceEEEEccHHHC---CCCC
Confidence 4578899999999999999999874 258999999999999999987652 4788888766543 3344
Q ss_pred CcEEEEEEeCCCCCCCCCceeech--hhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTS--ETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
..||+|++.. ++++. ++...+++++.++|||||++++.++
T Consensus 157 ~~fD~v~~~~---------~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 157 NTYDLIVIQW---------TAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp SCEEEEEEES---------CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeEEEEEcc---------hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 5899999883 44433 5678999999999999999999885
No 81
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.64 E-value=3.3e-15 Score=120.94 Aligned_cols=107 Identities=16% Similarity=0.180 Sum_probs=86.5
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
..++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|++++...+ ..+++++..+..++. . +
T Consensus 30 ~~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~---~-~ 95 (199)
T 2xvm_A 30 VVKPGKTLDLGCGNGRNSLYLAAN------GYDVDAWDKNAMSIANVERIKSIEN----LDNLHTRVVDLNNLT---F-D 95 (199)
T ss_dssp TSCSCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEECCGGGCC---C-C
T ss_pred ccCCCeEEEEcCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHHHHhCC----CCCcEEEEcchhhCC---C-C
Confidence 346789999999999999999987 3699999999999999999998766 357888887665432 2 4
Q ss_pred CcEEEEEEeCCCCCCCCCceeec--hhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITT--SETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~--~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
..||+|+++. +.++ .++...+++++.++|||||++++....
T Consensus 96 ~~~D~v~~~~---------~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 96 RQYDFILSTV---------VLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp CCEEEEEEES---------CGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CCceEEEEcc---------hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEee
Confidence 5799999883 2332 346789999999999999998887653
No 82
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.64 E-value=6.2e-15 Score=120.84 Aligned_cols=104 Identities=22% Similarity=0.227 Sum_probs=82.2
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++ ++.++.++..++. .
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~d~~~~~----~ 99 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA------GFDVDATDGSPELAAEASRRL----------GRPVRTMLFHQLD----A 99 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHH----------TSCCEECCGGGCC----C
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc------CCeEEEECCCHHHHHHHHHhc----------CCceEEeeeccCC----C
Confidence 3567889999999999999999987 369999999999999999876 2344554544333 4
Q ss_pred CCcEEEEEEeCCCCCCCCCceeech--hhHHHHHHHHHhcccCCcEEEEEEecCC
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTS--ETTKMALEAAERILIPGGLISMVVYVGH 223 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 223 (267)
+..||+|+++. ++++. ++...+++++.++|||||++++......
T Consensus 100 ~~~fD~v~~~~---------~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 145 (211)
T 3e23_A 100 IDAYDAVWAHA---------CLLHVPRDELADVLKLIWRALKPGGLFYASYKSGE 145 (211)
T ss_dssp CSCEEEEEECS---------CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCS
T ss_pred CCcEEEEEecC---------chhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCC
Confidence 56899999983 33333 4778999999999999999999876543
No 83
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.64 E-value=2.5e-15 Score=123.35 Aligned_cols=104 Identities=17% Similarity=0.158 Sum_probs=84.4
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
++++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++ .+ ..+++++.++..++ ..+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~~D~s~~~~~~a~~----~~----~~~~~~~~~d~~~~----~~~ 105 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGL------ADRVTALDGSAEMIAEAGR----HG----LDNVEFRQQDLFDW----TPD 105 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHH------SSEEEEEESCHHHHHHHGG----GC----CTTEEEEECCTTSC----CCS
T ss_pred CCCCCeEEEECCCCCHHHHHHHhc------CCeEEEEeCCHHHHHHHHh----cC----CCCeEEEecccccC----CCC
Confidence 567789999999999999999988 3799999999999999988 22 36789988776544 335
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhh--HHHHHHHHHhcccCCcEEEEEEecC
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSET--TKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
..||+|+++. ++++.++ ...+++++.++|||||++++.++..
T Consensus 106 ~~~D~v~~~~---------~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 106 RQWDAVFFAH---------WLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp SCEEEEEEES---------CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CceeEEEEec---------hhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 5899999983 4443333 4899999999999999999987643
No 84
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.64 E-value=4.1e-15 Score=125.49 Aligned_cols=126 Identities=18% Similarity=0.137 Sum_probs=95.6
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhc-cccccccceEEEecChhhhhhcC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKT-TSKAEKGLVKLFNMCHSRMEEIV 168 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~-~~~~~~~~v~~~~~~~~~l~~~~ 168 (267)
..+.++.+|||+|||+|.++..+++.+++ +.+|+++|+++.+++.|+++++.+ + ..+++++..+..+. .
T Consensus 92 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~g----~~~v~~~~~d~~~~---~ 161 (258)
T 2pwy_A 92 LDLAPGMRVLEAGTGSGGLTLFLARAVGE---KGLVESYEARPHHLAQAERNVRAFWQ----VENVRFHLGKLEEA---E 161 (258)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCT---TSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEESCGGGC---C
T ss_pred cCCCCCCEEEEECCCcCHHHHHHHHHhCC---CCEEEEEeCCHHHHHHHHHHHHHhcC----CCCEEEEECchhhc---C
Confidence 35678999999999999999999998653 579999999999999999999876 5 46788888766443 1
Q ss_pred CCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceEE
Q 041272 169 PKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWIC 247 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 247 (267)
.++..||+|+++++ +...+++++.++|||||++++.+.. . ....+..+.+...+|..
T Consensus 162 ~~~~~~D~v~~~~~--------------~~~~~l~~~~~~L~~gG~l~~~~~~-----~---~~~~~~~~~l~~~gf~~ 218 (258)
T 2pwy_A 162 LEEAAYDGVALDLM--------------EPWKVLEKAALALKPDRFLVAYLPN-----I---TQVLELVRAAEAHPFRL 218 (258)
T ss_dssp CCTTCEEEEEEESS--------------CGGGGHHHHHHHEEEEEEEEEEESC-----H---HHHHHHHHHHTTTTEEE
T ss_pred CCCCCcCEEEECCc--------------CHHHHHHHHHHhCCCCCEEEEEeCC-----H---HHHHHHHHHHHHCCCce
Confidence 23347999999842 2247899999999999999988752 1 23334444444556644
No 85
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.64 E-value=2.1e-15 Score=129.11 Aligned_cols=127 Identities=14% Similarity=0.153 Sum_probs=97.0
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhc-cccccccceEEEecChhhhhhcCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKT-TSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~-~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
.+.++.+|||+|||+|.++..+++.+++ +.+|+|+|+++.+++.|+++++.+ + ..+++++.++..+ ..
T Consensus 107 ~~~~~~~VLD~G~G~G~~~~~la~~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~g----~~~v~~~~~d~~~---~~- 175 (275)
T 1yb2_A 107 GLRPGMDILEVGVGSGNMSSYILYALNG---KGTLTVVERDEDNLKKAMDNLSEFYD----IGNVRTSRSDIAD---FI- 175 (275)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHTT---SSEEEEECSCHHHHHHHHHHHHTTSC----CTTEEEECSCTTT---CC-
T ss_pred CCCCcCEEEEecCCCCHHHHHHHHHcCC---CCEEEEEECCHHHHHHHHHHHHhcCC----CCcEEEEECchhc---cC-
Confidence 4678899999999999999999997532 589999999999999999999886 5 4678998876644 22
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceEEEE
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWICCK 249 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 249 (267)
++..||+|+++++ +..++++++.++|||||++++.+.. . .......+.+...+|..+.
T Consensus 176 ~~~~fD~Vi~~~~--------------~~~~~l~~~~~~LkpgG~l~i~~~~-----~---~~~~~~~~~l~~~Gf~~~~ 233 (275)
T 1yb2_A 176 SDQMYDAVIADIP--------------DPWNHVQKIASMMKPGSVATFYLPN-----F---DQSEKTVLSLSASGMHHLE 233 (275)
T ss_dssp CSCCEEEEEECCS--------------CGGGSHHHHHHTEEEEEEEEEEESS-----H---HHHHHHHHHSGGGTEEEEE
T ss_pred cCCCccEEEEcCc--------------CHHHHHHHHHHHcCCCCEEEEEeCC-----H---HHHHHHHHHHHHCCCeEEE
Confidence 2347999999732 2247899999999999999998762 1 2334455555556676554
Q ss_pred E
Q 041272 250 F 250 (267)
Q Consensus 250 ~ 250 (267)
.
T Consensus 234 ~ 234 (275)
T 1yb2_A 234 T 234 (275)
T ss_dssp E
T ss_pred E
Confidence 3
No 86
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.64 E-value=1.6e-15 Score=124.74 Aligned_cols=104 Identities=12% Similarity=0.123 Sum_probs=84.6
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++... .++++++++..++. .+
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~~----~~ 112 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPH------CKRLTVIDVMPRAIGRACQRTKRW------SHISWAATDILQFS----TA 112 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGG------EEEEEEEESCHHHHHHHHHHTTTC------SSEEEEECCTTTCC----CS
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHhcccC------CCeEEEEcchhhCC----CC
Confidence 446789999999999999999987 369999999999999999988763 47899887765544 34
Q ss_pred CcEEEEEEeCCCCCCCCCceeech---hhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTS---ETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~---~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+||+|+++. ++++. +...++++++.++|||||++++.+.
T Consensus 113 ~~fD~v~~~~---------~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 113 ELFDLIVVAE---------VLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp CCEEEEEEES---------CGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCccEEEEcc---------HHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 5899999983 33332 3446889999999999999998775
No 87
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.64 E-value=9.9e-16 Score=131.70 Aligned_cols=109 Identities=17% Similarity=0.212 Sum_probs=90.5
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||+|||+|.++..+++.++. +.+|+|+|+|+.+++.|++++...+ .+++++.++..++. . +
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~-----~~v~~~~~d~~~~~---~-~ 87 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPE---GSKYTGIDSGETLLAEARELFRLLP-----YDSEFLEGDATEIE---L-N 87 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCT---TCEEEEEESCHHHHHHHHHHHHSSS-----SEEEEEESCTTTCC---C-S
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHhcC-----CceEEEEcchhhcC---c-C
Confidence 567889999999999999999998643 4799999999999999999988755 48999987765432 2 3
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
.+||+|+++. ++++.++..++++++.++|||||++++.+..
T Consensus 88 ~~fD~v~~~~---------~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 88 DKYDIAICHA---------FLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SCEEEEEEES---------CGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCeeEEEECC---------hhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 4899999983 4555566789999999999999999988764
No 88
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.64 E-value=5.9e-16 Score=131.75 Aligned_cols=147 Identities=16% Similarity=0.108 Sum_probs=94.1
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccc---------------------
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKA--------------------- 149 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~--------------------- 149 (267)
...++.+|||||||+|.++..++... ..+|+|+|+|+.|++.|+++++......
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~-----~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~ 126 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDS-----FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEE 126 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGT-----EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhh-----hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhh
Confidence 34578899999999998887776541 2479999999999999999875531000
Q ss_pred ----cccceE-EEecChhhhhhcC-CCCCcEEEEEEeCCCCCCCCCceeec----hhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 150 ----EKGLVK-LFNMCHSRMEEIV-PKSTAVRLVAFNLGYLPGGDKSVITT----SETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 150 ----~~~~v~-~~~~~~~~l~~~~-~~~~~~d~ii~~~~~lp~~d~~~~~~----~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
...++. ++.+|..+..... ....+||+|+++. ++++ .++..+++++++++|||||+|+++.
T Consensus 127 ~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~---------~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 127 KEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLL---------AMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEES---------CHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehH---------HHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 011233 6665554321111 1234799999984 3332 3567899999999999999999987
Q ss_pred ecCCCC---C-------hhhHHHHHHHHHhCCCCceEEEEEeeec
Q 041272 220 YVGHPG---G-------REELEAVEAFARSLSVDDWICCKFQMLN 254 (267)
Q Consensus 220 ~~~~~~---~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 254 (267)
...... + .-..+.+. +.+...+|.++....+.
T Consensus 198 ~~~~~~~~~g~~~~~~~~~~~~~l~---~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 198 TLRLPSYMVGKREFSCVALEKGEVE---QAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp ESSCCEEEETTEEEECCCCCHHHHH---HHHHHTTEEEEEEEEEC
T ss_pred eecCccceeCCeEeeccccCHHHHH---HHHHHCCCEEEEEeecc
Confidence 532210 0 00122333 33444678887766543
No 89
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.64 E-value=4.4e-15 Score=125.35 Aligned_cols=107 Identities=21% Similarity=0.242 Sum_probs=87.8
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
..+.++.+|||+|||+|.++..+++.+++ +.+|+|+|+++++++.|+++++..+ ...+++++.++..+. .
T Consensus 89 ~~~~~~~~vldiG~G~G~~~~~l~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~---~- 158 (255)
T 3mb5_A 89 AGISPGDFIVEAGVGSGALTLFLANIVGP---EGRVVSYEIREDFAKLAWENIKWAG---FDDRVTIKLKDIYEG---I- 158 (255)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCT---TSEEEEECSCHHHHHHHHHHHHHHT---CTTTEEEECSCGGGC---C-
T ss_pred hCCCCCCEEEEecCCchHHHHHHHHHhCC---CeEEEEEecCHHHHHHHHHHHHHcC---CCCceEEEECchhhc---c-
Confidence 35678999999999999999999998653 5899999999999999999998877 344599998776532 2
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
++.+||+|+++++ ....+++++.++|||||++++...
T Consensus 159 ~~~~~D~v~~~~~--------------~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 159 EEENVDHVILDLP--------------QPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp CCCSEEEEEECSS--------------CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCcCEEEECCC--------------CHHHHHHHHHHHcCCCCEEEEEEC
Confidence 2347999999843 224789999999999999988765
No 90
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.64 E-value=2.4e-15 Score=129.52 Aligned_cols=113 Identities=15% Similarity=0.111 Sum_probs=88.5
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCc
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTA 173 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~ 173 (267)
++.+|||+|||+|.++..+++. + +.+|+|+|+|+.+++.|++|++.++ ...++++++++..+... ..
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~----~~~v~~vDis~~al~~A~~n~~~~~---l~~~v~~~~~D~~~~~~-----~~ 189 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-S----DAIVFATDVSSKAVEIARKNAERHG---VSDRFFVRKGEFLEPFK-----EK 189 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-S----SCEEEEEESCHHHHHHHHHHHHHTT---CTTSEEEEESSTTGGGG-----GG
T ss_pred CCCEEEEEeCchhHHHHHHHHC-C----CCEEEEEECCHHHHHHHHHHHHHcC---CCCceEEEECcchhhcc-----cc
Confidence 6679999999999999999988 4 4899999999999999999999877 33469999877654321 25
Q ss_pred E---EEEEEeCCCCCCCC---Cceeechh-------hHHHHHHHHH-hcccCCcEEEEEE
Q 041272 174 V---RLVAFNLGYLPGGD---KSVITTSE-------TTKMALEAAE-RILIPGGLISMVV 219 (267)
Q Consensus 174 ~---d~ii~~~~~lp~~d---~~~~~~~~-------~~~~~l~~~~-~~LkpgG~l~i~~ 219 (267)
| |+|++|++|++..+ ..+.+.+. +...+++++. +.|+|||++++..
T Consensus 190 f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 190 FASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp TTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred cCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 7 99999999987653 11112221 1237899999 9999999998754
No 91
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.64 E-value=2.9e-15 Score=130.63 Aligned_cols=109 Identities=14% Similarity=0.135 Sum_probs=89.8
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++..+ .+|+|+|+|+++++.|++++...+ ...+++++.++..++.
T Consensus 87 ~~~~~~~vLDiGcG~G~~~~~la~~~~-----~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~----- 153 (318)
T 2fk8_A 87 DLKPGMTLLDIGCGWGTTMRRAVERFD-----VNVIGLTLSKNQHARCEQVLASID---TNRSRQVLLQGWEDFA----- 153 (318)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHHC-----CEEEEEESCHHHHHHHHHHHHTSC---CSSCEEEEESCGGGCC-----
T ss_pred CCCCcCEEEEEcccchHHHHHHHHHCC-----CEEEEEECCHHHHHHHHHHHHhcC---CCCceEEEECChHHCC-----
Confidence 456889999999999999999998863 699999999999999999998866 3457899887765442
Q ss_pred CCcEEEEEEeCCCCCCCCCceeech--hhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTS--ETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
..||+|++.. ++++. ++...+++++.++|||||++++.++..
T Consensus 154 -~~fD~v~~~~---------~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 154 -EPVDRIVSIE---------AFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp -CCCSEEEEES---------CGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred -CCcCEEEEeC---------hHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 4799999883 33333 677899999999999999999988754
No 92
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.64 E-value=2.3e-15 Score=124.03 Aligned_cols=113 Identities=15% Similarity=0.113 Sum_probs=85.3
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccc-ccccceEEEecChhhhhhcCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSK-AEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~-~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
..++.+|||+|||+|.++..+++..+ ..+|+|+|+|+.+++.|++++...+.. ....++++++++.... ...
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~ 99 (217)
T 3jwh_A 27 QSNARRVIDLGCGQGNLLKILLKDSF----FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ---DKR 99 (217)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHHCTT----CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC---CGG
T ss_pred hcCCCEEEEeCCCCCHHHHHHHhhCC----CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc---ccc
Confidence 35778999999999999999998743 379999999999999999998776510 0012799988765322 222
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechh--hHHHHHHHHHhcccCCcEEEEEEe
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSE--TTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
..+||+|+++ .++++.+ ...++++++.++|||||+++++..
T Consensus 100 ~~~fD~v~~~---------~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 100 FHGYDAATVI---------EVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp GCSCSEEEEE---------SCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred CCCcCEEeeH---------HHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 3479999988 3444333 448999999999999997776654
No 93
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.64 E-value=4.5e-15 Score=130.52 Aligned_cols=123 Identities=11% Similarity=0.043 Sum_probs=94.6
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccccccc-ceEEEecChhhhhhcC-CC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKG-LVKLFNMCHSRMEEIV-PK 170 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~-~v~~~~~~~~~l~~~~-~~ 170 (267)
.++.+|||+|||+|.+++.+++. +.+|++||+|+.+++.|++|++.++ ... +++++++|..++.... ..
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~------ga~V~~VD~s~~al~~a~~n~~~~g---l~~~~v~~i~~D~~~~l~~~~~~ 222 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA------GAEVTHVDASKKAIGWAKENQVLAG---LEQAPIRWICEDAMKFIQREERR 222 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHHHHT---CTTSCEEEECSCHHHHHHHHHHH
T ss_pred CCCCcEEEcccccCHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHHHcC---CCccceEEEECcHHHHHHHHHhc
Confidence 46789999999999999999986 3599999999999999999999877 222 4899998877654321 11
Q ss_pred CCcEEEEEEeCCCCCCC-CCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCC
Q 041272 171 STAVRLVAFNLGYLPGG-DKSVITTSETTKMALEAAERILIPGGLISMVVYVGHP 224 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~-d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 224 (267)
+..||+|++|+++.... ...+.........+++++.++|||||++++.+.....
T Consensus 223 ~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~ 277 (332)
T 2igt_A 223 GSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIR 277 (332)
T ss_dssp TCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTT
T ss_pred CCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCC
Confidence 24799999998753322 2223445667789999999999999998877765443
No 94
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.64 E-value=3.4e-15 Score=123.55 Aligned_cols=111 Identities=12% Similarity=0.154 Sum_probs=88.2
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcC-CC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIV-PK 170 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~~ 170 (267)
+.++.+|||+|||+|..+..+++.++. +++|+++|+++.+++.|++++...+ ...+++++.++..+..... ..
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~ 129 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSS---GGRVVTLEASEKHADIARSNIERAN---LNDRVEVRTGLALDSLQQIENE 129 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCS---SCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCHHHHHHHHHHT
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHHHHhc
Confidence 356789999999999999999998753 5899999999999999999998877 3457999998876543321 11
Q ss_pred -CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 171 -STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 171 -~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
...||+|+.+.. ......+++++.++|||||++++...
T Consensus 130 ~~~~fD~v~~d~~------------~~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 130 KYEPFDFIFIDAD------------KQNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp TCCCCSEEEECSC------------GGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred CCCCcCEEEEcCC------------cHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 136999998832 23456899999999999998887543
No 95
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.63 E-value=4.8e-15 Score=120.62 Aligned_cols=106 Identities=13% Similarity=0.117 Sum_probs=86.1
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
++++ +|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...+ .++.++..+..++ ..++
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~---~~~~ 92 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL------GYEVTAVDQSSVGLAKAKQLAQEKG-----VKITTVQSNLADF---DIVA 92 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT------TCEEEEECSSHHHHHHHHHHHHHHT-----CCEEEECCBTTTB---SCCT
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC------CCeEEEEECCHHHHHHHHHHHHhcC-----CceEEEEcChhhc---CCCc
Confidence 5667 9999999999999999986 3699999999999999999998765 3788887665443 2334
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
..||+|++++.+ ........+++++.++|||||++++.++.
T Consensus 93 ~~fD~v~~~~~~---------~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 93 DAWEGIVSIFCH---------LPSSLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp TTCSEEEEECCC---------CCHHHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred CCccEEEEEhhc---------CCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 579999987422 23456789999999999999999998864
No 96
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.63 E-value=2.2e-15 Score=123.17 Aligned_cols=110 Identities=14% Similarity=0.104 Sum_probs=86.0
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccc-cceEEEecChhhhhhcCCCCC
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEK-GLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~~ 172 (267)
++.+|||+|||+|.++..++... ..+|+|+|+|++|++.|+++++.++ .. .++++++++..++.... .+.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-----~~~v~gvD~s~~~l~~a~~~~~~~~---~~~~~v~~~~~d~~~~~~~~-~~~ 123 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-----AKKVTFLELDKTVANQLKKNLQTLK---CSSEQAEVINQSSLDFLKQP-QNQ 123 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-----CSEEEEECSCHHHHHHHHHHHHHTT---CCTTTEEEECSCHHHHTTSC-CSS
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-----CCEEEEEECCHHHHHHHHHHHHHhC---CCccceEEEECCHHHHHHhh-ccC
Confidence 67899999999999999877662 2589999999999999999998877 21 58999988776553322 134
Q ss_pred c-EEEEEEeCCCCCCCCCceeechhhHHHHHHHH--HhcccCCcEEEEEEecC
Q 041272 173 A-VRLVAFNLGYLPGGDKSVITTSETTKMALEAA--ERILIPGGLISMVVYVG 222 (267)
Q Consensus 173 ~-~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~--~~~LkpgG~l~i~~~~~ 222 (267)
+ ||+|++++++. ......+++.+ .++|||||++++.+...
T Consensus 124 ~~fD~I~~~~~~~----------~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 124 PHFDVVFLDPPFH----------FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCEEEEEECCCSS----------SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCCEEEECCCCC----------CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 7 99999996531 13345778888 67899999999988743
No 97
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.63 E-value=6.6e-15 Score=128.59 Aligned_cols=137 Identities=17% Similarity=0.245 Sum_probs=98.8
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||+|||+|..+..+++.++. .++|+|+|+|+.+++.+++++++.+ ..++++++++..++...
T Consensus 115 ~~~~g~~VLDlg~G~G~~t~~la~~~~~---~~~v~avD~s~~~l~~a~~~~~~~g----~~~v~~~~~D~~~~~~~--- 184 (315)
T 1ixk_A 115 DPKPGEIVADMAAAPGGKTSYLAQLMRN---DGVIYAFDVDENRLRETRLNLSRLG----VLNVILFHSSSLHIGEL--- 184 (315)
T ss_dssp CCCTTCEEEECCSSCSHHHHHHHHHTTT---CSEEEEECSCHHHHHHHHHHHHHHT----CCSEEEESSCGGGGGGG---
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCC---CCEEEEEcCCHHHHHHHHHHHHHhC----CCeEEEEECChhhcccc---
Confidence 4678899999999999999999998643 4799999999999999999999887 45799998887665442
Q ss_pred CCcEEEEEEeCCC-----CCCCCCceee--------chhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHH
Q 041272 171 STAVRLVAFNLGY-----LPGGDKSVIT--------TSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFA 237 (267)
Q Consensus 171 ~~~~d~ii~~~~~-----lp~~d~~~~~--------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 237 (267)
...||.|+++++. +......... ......++++++.++|||||+++++++.-++ .+....+..++
T Consensus 185 ~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~--~Ene~~v~~~l 262 (315)
T 1ixk_A 185 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEP--EENEFVIQWAL 262 (315)
T ss_dssp CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCG--GGTHHHHHHHH
T ss_pred cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCh--HHhHHHHHHHH
Confidence 3479999998653 2111000000 1122368999999999999999987763322 22334455666
Q ss_pred Hh
Q 041272 238 RS 239 (267)
Q Consensus 238 ~~ 239 (267)
+.
T Consensus 263 ~~ 264 (315)
T 1ixk_A 263 DN 264 (315)
T ss_dssp HH
T ss_pred hc
Confidence 65
No 98
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.63 E-value=1e-14 Score=129.31 Aligned_cols=153 Identities=14% Similarity=0.097 Sum_probs=110.2
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
..+++.+|||+|||+|.+++.++...++ +.+|+|+|+++.+++.|++|++..+ ..+++++++|..++...
T Consensus 200 ~~~~~~~vLD~gcGsG~~~ie~a~~~~~---~~~v~g~Di~~~~i~~a~~n~~~~g----~~~i~~~~~D~~~~~~~--- 269 (354)
T 3tma_A 200 DARPGMRVLDPFTGSGTIALEAASTLGP---TSPVYAGDLDEKRLGLAREAALASG----LSWIRFLRADARHLPRF--- 269 (354)
T ss_dssp TCCTTCCEEESSCTTSHHHHHHHHHHCT---TSCEEEEESCHHHHHHHHHHHHHTT----CTTCEEEECCGGGGGGT---
T ss_pred CCCCCCEEEeCCCCcCHHHHHHHHhhCC---CceEEEEECCHHHHHHHHHHHHHcC----CCceEEEeCChhhCccc---
Confidence 4567889999999999999999998632 4799999999999999999999987 34899999887665432
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceEEEEE
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWICCKF 250 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 250 (267)
...||+|++|++|-.... ........+..+++++.++|||||.+++.+.. ......+. . .++...+.
T Consensus 270 ~~~~D~Ii~npPyg~r~~-~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~--------~~~~~~~~---~-~g~~~~~~ 336 (354)
T 3tma_A 270 FPEVDRILANPPHGLRLG-RKEGLFHLYWDFLRGALALLPPGGRVALLTLR--------PALLKRAL---P-PGFALRHA 336 (354)
T ss_dssp CCCCSEEEECCCSCC-----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC--------HHHHHHHC---C-TTEEEEEE
T ss_pred cCCCCEEEECCCCcCccC-CcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC--------HHHHHHHh---h-cCcEEEEE
Confidence 235799999987621110 00112344578999999999999999988761 12222222 2 56777666
Q ss_pred eeecC-CCCceEEEeec
Q 041272 251 QMLNR-PLAPVLVFLFK 266 (267)
Q Consensus 251 ~~~~~-~~~p~~~~~~k 266 (267)
..+.. ...+.++++.|
T Consensus 337 ~~l~~g~l~~~i~vl~r 353 (354)
T 3tma_A 337 RVVEQGGVYPRVFVLEK 353 (354)
T ss_dssp EECCBTTBCCEEEEEEE
T ss_pred EEEEeCCEEEEEEEEEc
Confidence 66544 45667777765
No 99
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.63 E-value=5.2e-15 Score=132.63 Aligned_cols=146 Identities=16% Similarity=0.105 Sum_probs=107.4
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcC-CCCC
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIV-PKST 172 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~~~~ 172 (267)
++.+|||+|||+|.++..+|+. ..+|+|+|+|+.+++.|++|++.++ ..+++++.++..++.... ..+.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~------~~~v~~vD~s~~~~~~a~~n~~~n~----~~~~~~~~~d~~~~~~~~~~~~~ 278 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG------FREVVAVDSSAEALRRAEENARLNG----LGNVRVLEANAFDLLRRLEKEGE 278 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH------EEEEEEEESCHHHHHHHHHHHHHTT----CTTEEEEESCHHHHHHHHHHTTC
T ss_pred CCCeEEEeeeccCHHHHHHHHh------CCEEEEEECCHHHHHHHHHHHHHcC----CCCceEEECCHHHHHHHHHhcCC
Confidence 7889999999999999999987 2789999999999999999999987 456999998887654321 1234
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceEEEEE
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWICCKF 250 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 250 (267)
.||+|++|+++.......+........+++.++.++|+|||+++++++............+.+.+.... ..++++..
T Consensus 279 ~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g-~~~~~i~~ 355 (382)
T 1wxx_A 279 RFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAH-RLLRVVEK 355 (382)
T ss_dssp CEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTT-CCEEEEEE
T ss_pred CeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcC-CeEEEEEc
Confidence 799999998776554444444456678899999999999999999887554422212333444444332 23555543
No 100
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.63 E-value=4.8e-15 Score=133.44 Aligned_cols=126 Identities=16% Similarity=0.101 Sum_probs=99.4
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc-CC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI-VP 169 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~-~~ 169 (267)
..+++.+|||+|||+|.++..+|+. + ..+|+|+|+|+.+++.|++|++.++ ...+++++.++..++... ..
T Consensus 214 ~~~~~~~VLDl~~G~G~~~~~la~~-g----~~~v~~vD~s~~~l~~a~~n~~~n~---~~~~v~~~~~d~~~~~~~~~~ 285 (396)
T 2as0_A 214 WVQPGDRVLDVFTYTGGFAIHAAIA-G----ADEVIGIDKSPRAIETAKENAKLNG---VEDRMKFIVGSAFEEMEKLQK 285 (396)
T ss_dssp GCCTTCEEEETTCTTTHHHHHHHHT-T----CSEEEEEESCHHHHHHHHHHHHHTT---CGGGEEEEESCHHHHHHHHHH
T ss_pred HhhCCCeEEEecCCCCHHHHHHHHC-C----CCEEEEEeCCHHHHHHHHHHHHHcC---CCccceEEECCHHHHHHHHHh
Confidence 3457889999999999999999986 2 3699999999999999999999887 334899999887765432 21
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCC
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHP 224 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 224 (267)
++..||+|++|+++.......+.........++.++.++|+|||+++++++..+.
T Consensus 286 ~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 340 (396)
T 2as0_A 286 KGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHV 340 (396)
T ss_dssp TTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTS
T ss_pred hCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCC
Confidence 2347999999987755444344444566788999999999999999888875444
No 101
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.63 E-value=2.3e-15 Score=129.57 Aligned_cols=118 Identities=19% Similarity=0.252 Sum_probs=87.4
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|++++...+......++.+..++..++......+.
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 129 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEE------GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGD 129 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTT
T ss_pred cCCCEEEEecCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCC
Confidence 56789999999999999999987 369999999999999999987543321224577888877766543223456
Q ss_pred cEEEEEEe-C--CCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 173 AVRLVAFN-L--GYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 173 ~~d~ii~~-~--~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+||+|++. . ++++... .......++++++.++|||||++++...
T Consensus 130 ~fD~V~~~g~~l~~~~~~~----~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 130 GFDAVICLGNSFAHLPDSK----GDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp CEEEEEECTTCGGGSCCSS----SSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CeEEEEEcChHHhhcCccc----cCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 89999985 2 1122100 0124478999999999999999998765
No 102
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.63 E-value=2e-14 Score=129.38 Aligned_cols=148 Identities=11% Similarity=0.026 Sum_probs=108.4
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccccc-ccceEEEecChhhhhhc-CCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAE-KGLVKLFNMCHSRMEEI-VPK 170 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~-~~~v~~~~~~~~~l~~~-~~~ 170 (267)
.++.+|||+|||+|.+++.+|+.. ..+|+|+|+|+.+++.|++|++.++ . ..+++++.+|..++... ...
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-----~~~V~~vD~s~~al~~a~~n~~~ng---l~~~~v~~~~~D~~~~~~~~~~~ 290 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-----CSQVVSVDTSQEALDIARQNVELNK---LDLSKAEFVRDDVFKLLRTYRDR 290 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-----CSEEEEEESCHHHHHHHHHHHHHTT---CCGGGEEEEESCHHHHHHHHHHT
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-----CCEEEEEECCHHHHHHHHHHHHHcC---CCccceEEEECCHHHHHHHHHhc
Confidence 578899999999999999999862 2699999999999999999999887 3 23899999888765432 212
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceEEEE
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWICCK 249 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 249 (267)
+..||+|++|+++.......+........+++.++.++|+|||+++++++.......+....+.+.+.... ..++++.
T Consensus 291 ~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g-~~~~~i~ 368 (396)
T 3c0k_A 291 GEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAG-RDVQFIE 368 (396)
T ss_dssp TCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHT-CCEEEEE
T ss_pred CCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcC-CeEEEEE
Confidence 34799999998876555444444556778999999999999999999887654432222333333443332 2355444
No 103
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.63 E-value=1.1e-15 Score=131.97 Aligned_cols=114 Identities=21% Similarity=0.214 Sum_probs=84.3
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccc------------------------
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSK------------------------ 148 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~------------------------ 148 (267)
.++.+|||||||+|.++..+++.++ ..+|+|||+|+.|++.|++++...+..
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~----~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWG----PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTV 120 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTC----CSEEEEEESCHHHHHHHHHTC------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccc
Confidence 4678999999999999999999865 479999999999999999997654310
Q ss_pred ------------------------------ccccceEEEecChhhhhh--cCCCCCcEEEEEEeCCCCCCCCCceee---
Q 041272 149 ------------------------------AEKGLVKLFNMCHSRMEE--IVPKSTAVRLVAFNLGYLPGGDKSVIT--- 193 (267)
Q Consensus 149 ------------------------------~~~~~v~~~~~~~~~l~~--~~~~~~~~d~ii~~~~~lp~~d~~~~~--- 193 (267)
....+++|++++..+... .......||+|++. .+.+
T Consensus 121 ~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~---------~vl~~ih 191 (292)
T 3g07_A 121 RKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCL---------SLTKWVH 191 (292)
T ss_dssp ---------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEE---------SCHHHHH
T ss_pred cccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEC---------hHHHHhh
Confidence 001478998876643221 11234589999998 3432
Q ss_pred ---chhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 194 ---TSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 194 ---~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
..+...+++++++++|||||+|++..
T Consensus 192 l~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 192 LNWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred hcCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 23467899999999999999998864
No 104
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.63 E-value=6.9e-15 Score=120.14 Aligned_cols=102 Identities=8% Similarity=0.011 Sum_probs=83.5
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCc
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTA 173 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~ 173 (267)
++.+|||+|||+|..+..+++..+ +.+|+|+|+|+.+++.|++++...+ ..+++++.++..++. +...
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~----~~~~ 132 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP----EAHFTLLDSLGKRVRFLRQVQHELK----LENIEPVQSRVEEFP----SEPP 132 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT----TSEEEEEESCHHHHHHHHHHHHHTT----CSSEEEEECCTTTSC----CCSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC----CCEEEEEeCCHHHHHHHHHHHHHcC----CCCeEEEecchhhCC----ccCC
Confidence 478999999999999999998853 5899999999999999999998876 456888887665432 2347
Q ss_pred EEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 174 VRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 174 ~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
||+|+++. ......+++++.++|||||++++...
T Consensus 133 ~D~i~~~~-------------~~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 133 FDGVISRA-------------FASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp EEEEECSC-------------SSSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred cCEEEEec-------------cCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 99999862 12346899999999999999988754
No 105
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.63 E-value=3.4e-15 Score=123.04 Aligned_cols=103 Identities=16% Similarity=0.142 Sum_probs=82.1
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++. .+++++.++..++ ..+
T Consensus 43 ~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~d~~~~---~~~- 104 (220)
T 3hnr_A 43 NKSFGNVLEFGVGTGNLTNKLLLA------GRTVYGIEPSREMRMIAKEKLP--------KEFSITEGDFLSF---EVP- 104 (220)
T ss_dssp HTCCSEEEEECCTTSHHHHHHHHT------TCEEEEECSCHHHHHHHHHHSC--------TTCCEESCCSSSC---CCC-
T ss_pred ccCCCeEEEeCCCCCHHHHHHHhC------CCeEEEEeCCHHHHHHHHHhCC--------CceEEEeCChhhc---CCC-
Confidence 457889999999999999999987 3799999999999999998754 2677777665443 222
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHH--HHHHHHHhcccCCcEEEEEEec
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTK--MALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~--~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
.+||+|+++ .++++.++.. .+++++.++|||||++++.++.
T Consensus 105 ~~fD~v~~~---------~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 105 TSIDTIVST---------YAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp SCCSEEEEE---------SCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred CCeEEEEEC---------cchhcCChHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 579999998 3444444444 4999999999999999998753
No 106
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.63 E-value=4.5e-15 Score=123.94 Aligned_cols=106 Identities=10% Similarity=0.132 Sum_probs=86.4
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh-cCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE-IVPK 170 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~-~~~~ 170 (267)
+.++.+|||+|||+|..+..+++.. |+.+|+|+|+++.+++.|+++++..+ ...+++++.++..+... ..
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~----~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~-- 139 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASIS----DDIHVTTIERNETMIQYAKQNLATYH---FENQVRIIEGNALEQFENVN-- 139 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTC----TTCEEEEEECCHHHHHHHHHHHHHTT---CTTTEEEEESCGGGCHHHHT--
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhC----CCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEECCHHHHHHhhc--
Confidence 3477899999999999999999854 25899999999999999999998877 34589999988765433 33
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEE
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMV 218 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 218 (267)
+.+||+|+.+.. ......+++++.++|||||++++.
T Consensus 140 ~~~fD~V~~~~~------------~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 140 DKVYDMIFIDAA------------KAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp TSCEEEEEEETT------------SSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCCccEEEEcCc------------HHHHHHHHHHHHHhcCCCeEEEEe
Confidence 347999998832 233568999999999999999774
No 107
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.63 E-value=5e-15 Score=127.41 Aligned_cols=113 Identities=23% Similarity=0.324 Sum_probs=90.1
Q ss_pred hhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcC
Q 041272 89 KHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIV 168 (267)
Q Consensus 89 ~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 168 (267)
...+.++.+|||+|||+|.++..+++. + ..+|+|+|+|+.+++.|++++...+ ...++.++.++..++. .
T Consensus 59 ~~~~~~~~~vLDiGcG~G~~~~~l~~~-~----~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~--~ 128 (298)
T 1ri5_A 59 RLYTKRGDSVLDLGCGKGGDLLKYERA-G----IGEYYGVDIAEVSINDARVRARNMK---RRFKVFFRAQDSYGRH--M 128 (298)
T ss_dssp HHHCCTTCEEEEETCTTTTTHHHHHHH-T----CSEEEEEESCHHHHHHHHHHHHTSC---CSSEEEEEESCTTTSC--C
T ss_pred HHhCCCCCeEEEECCCCCHHHHHHHHC-C----CCEEEEEECCHHHHHHHHHHHHhcC---CCccEEEEECCccccc--c
Confidence 345678899999999999999998876 2 3599999999999999999998765 2357888887665442 1
Q ss_pred CCCCcEEEEEEeCCCCCCCCCceee----chhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 169 PKSTAVRLVAFNLGYLPGGDKSVIT----TSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d~~~~~----~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
..+..||+|+++. +.+ +.++..++++++.++|||||++++..+
T Consensus 129 ~~~~~fD~v~~~~---------~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 129 DLGKEFDVISSQF---------SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp CCSSCEEEEEEES---------CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCCcCEEEECc---------hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 1345899999883 232 356778999999999999999998876
No 108
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.63 E-value=2.9e-15 Score=126.65 Aligned_cols=105 Identities=15% Similarity=0.108 Sum_probs=86.3
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++.. . ..++.++.++..++ ..+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~-~----~~~~~~~~~d~~~~---~~~ 101 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR------GYRYIALDADAAMLEVFRQKIAG-V----DRKVQVVQADARAI---PLP 101 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT------TCEEEEEESCHHHHHHHHHHTTT-S----CTTEEEEESCTTSC---CSC
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC------CCEEEEEECCHHHHHHHHHHhhc-c----CCceEEEEcccccC---CCC
Confidence 4567889999999999999999987 37999999999999999998822 2 46889988776543 234
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEE
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMV 218 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 218 (267)
+..||+|+++ .+.++.++...+++++.++|||||++++.
T Consensus 102 ~~~fD~v~~~---------~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 102 DESVHGVIVV---------HLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp TTCEEEEEEE---------SCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCeeEEEEC---------CchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 4589999998 34555556789999999999999999887
No 109
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.62 E-value=4.1e-15 Score=128.66 Aligned_cols=120 Identities=15% Similarity=0.148 Sum_probs=88.8
Q ss_pred HhhHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChh
Q 041272 83 AANGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHS 162 (267)
Q Consensus 83 ~~~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~ 162 (267)
....++.....++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...+. ....++++++++..
T Consensus 71 ~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~-~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 71 EAREFATRTGPVSGPVLELAAGMGRLTFPFLDL------GWEVTALELSTSVLAAFRKRLAEAPA-DVRDRCTLVQGDMS 143 (299)
T ss_dssp HHHHHHHHHCCCCSCEEEETCTTTTTHHHHHTT------TCCEEEEESCHHHHHHHHHHHHTSCH-HHHTTEEEEECBTT
T ss_pred HHHHHHHhhCCCCCcEEEEeccCCHHHHHHHHc------CCeEEEEECCHHHHHHHHHHHhhccc-ccccceEEEeCchh
Confidence 333444333344569999999999999999987 36899999999999999999887540 00167999987765
Q ss_pred hhhhcCCCCCcEEEEEEeCCCCCCCCCceeec--hhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 163 RMEEIVPKSTAVRLVAFNLGYLPGGDKSVITT--SETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 163 ~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~--~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
++. . +..||+|++.. .+.+. .++...+++++.++|||||++++.++.
T Consensus 144 ~~~---~-~~~fD~v~~~~--------~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 144 AFA---L-DKRFGTVVISS--------GSINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp BCC---C-SCCEEEEEECH--------HHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCC---c-CCCcCEEEECC--------cccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 542 2 45899888642 12222 245689999999999999999998763
No 110
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.62 E-value=5.8e-15 Score=117.72 Aligned_cols=111 Identities=16% Similarity=0.130 Sum_probs=87.2
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||+|||+|.++..+++. + ..+|+|+|+|+.+++.|+++++..+ ...+++++.++..+......
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~-~----~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~~~~~-- 98 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR-G----MSAAVLVEKNRKAQAIIQDNIIMTK---AENRFTLLKMEAERAIDCLT-- 98 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT-T----CCEEEEECCCHHHHHHHHHHHHTTT---CGGGEEEECSCHHHHHHHBC--
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc-C----CCEEEEEECCHHHHHHHHHHHHHcC---CCCceEEEECcHHHhHHhhc--
Confidence 457789999999999999999987 2 3699999999999999999998876 34579999988776433322
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHH--hcccCCcEEEEEEecC
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAE--RILIPGGLISMVVYVG 222 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~--~~LkpgG~l~i~~~~~ 222 (267)
..||+|++++++. .....+.++.+. ++|||||++++.+...
T Consensus 99 ~~fD~i~~~~~~~----------~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 99 GRFDLVFLDPPYA----------KETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp SCEEEEEECCSSH----------HHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCCEEEECCCCC----------cchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 3599999995431 133456677776 9999999999988743
No 111
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.62 E-value=2.5e-15 Score=124.41 Aligned_cols=111 Identities=15% Similarity=0.176 Sum_probs=89.0
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
..++.+|||+|||+|..+..+++.++. +++|+++|+++.+++.|+++++..+ ...+++++.++..+........
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~ 135 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPK---DGTLITCDVDEKSTALAKEYWEKAG---LSDKIGLRLSPAKDTLAELIHA 135 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCT---TCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCHHHHHHHHHTT
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCC---CCEEEEEeCCHHHHHHHHHHHHHCC---CCCceEEEeCCHHHHHHHhhhc
Confidence 346789999999999999999998753 5899999999999999999998877 3456999998876543322111
Q ss_pred ---CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 172 ---TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 172 ---~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
..||+|+.+.. ......+++++.++|||||++++...
T Consensus 136 ~~~~~fD~v~~~~~------------~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 136 GQAWQYDLIYIDAD------------KANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp TCTTCEEEEEECSC------------GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred cCCCCccEEEECCC------------HHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 47999998742 34567899999999999999988654
No 112
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.62 E-value=3.8e-15 Score=122.85 Aligned_cols=112 Identities=15% Similarity=0.156 Sum_probs=84.4
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccc-ccccceEEEecChhhhhhcCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSK-AEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~-~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
.++.+|||+|||+|.++..+++..+ ..+|+|+|+|+.+++.|++++...+.. ....+++++.++...+ ....
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~ 100 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKS----FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR---DKRF 100 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTT----CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC---CGGG
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCC----CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc---cccc
Confidence 5678999999999999999998743 379999999999999999998775510 0012789988765322 2223
Q ss_pred CcEEEEEEeCCCCCCCCCceeechh--hHHHHHHHHHhcccCCcEEEEEEe
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSE--TTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+||+|++. .++++.+ ...++++++.++|||||+++++..
T Consensus 101 ~~fD~V~~~---------~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 101 SGYDAATVI---------EVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp TTCSEEEEE---------SCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred CCCCEEEEH---------HHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 479999987 3444434 447999999999999997766554
No 113
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.62 E-value=1.8e-14 Score=119.48 Aligned_cols=134 Identities=9% Similarity=0.108 Sum_probs=98.8
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
..++++.+|||+|||+|.+++.+|+.. |..+|+|+|+++.+++.|++|++.++ ...+++++.++.. +.++
T Consensus 11 ~~v~~g~~VlDIGtGsG~l~i~la~~~----~~~~V~avDi~~~al~~A~~N~~~~g---l~~~i~~~~~d~l---~~l~ 80 (225)
T 3kr9_A 11 SFVSQGAILLDVGSDHAYLPIELVERG----QIKSAIAGEVVEGPYQSAVKNVEAHG---LKEKIQVRLANGL---AAFE 80 (225)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTT----SEEEEEEEESSHHHHHHHHHHHHHTT---CTTTEEEEECSGG---GGCC
T ss_pred HhCCCCCEEEEeCCCcHHHHHHHHHhC----CCCEEEEEECCHHHHHHHHHHHHHcC---CCceEEEEECchh---hhcc
Confidence 456788999999999999999999873 25799999999999999999999988 4567999986652 2222
Q ss_pred CCCcEEEEEEe-CCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceEEE
Q 041272 170 KSTAVRLVAFN-LGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWICC 248 (267)
Q Consensus 170 ~~~~~d~ii~~-~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 248 (267)
....||+|+.. ++ ......++.++.+.|+++|++++.-. .....+.+|+.. .+|.+.
T Consensus 81 ~~~~~D~IviaG~G------------g~~i~~Il~~~~~~L~~~~~lVlq~~-------~~~~~vr~~L~~---~Gf~i~ 138 (225)
T 3kr9_A 81 ETDQVSVITIAGMG------------GRLIARILEEGLGKLANVERLILQPN-------NREDDLRIWLQD---HGFQIV 138 (225)
T ss_dssp GGGCCCEEEEEEEC------------HHHHHHHHHHTGGGCTTCCEEEEEES-------SCHHHHHHHHHH---TTEEEE
T ss_pred cCcCCCEEEEcCCC------------hHHHHHHHHHHHHHhCCCCEEEEECC-------CCHHHHHHHHHH---CCCEEE
Confidence 22258877643 21 23346889999999999999977544 134566677765 457777
Q ss_pred EEeeecC
Q 041272 249 KFQMLNR 255 (267)
Q Consensus 249 ~~~~~~~ 255 (267)
....+..
T Consensus 139 ~e~lv~e 145 (225)
T 3kr9_A 139 AESILEE 145 (225)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 6655443
No 114
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.62 E-value=4.1e-15 Score=125.23 Aligned_cols=119 Identities=13% Similarity=0.157 Sum_probs=86.6
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhc--------cccccccceEEEecChh
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKT--------TSKAEKGLVKLFNMCHS 162 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~--------~~~~~~~~v~~~~~~~~ 162 (267)
.++++.+|||+|||+|.++..+++..+ ..+|+|||+|+.+++.|+++++.+ + ..++.++.++..
T Consensus 46 ~~~~~~~vLDiGcG~G~~~~~la~~~~----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~----~~nv~~~~~D~~ 117 (246)
T 2vdv_E 46 QMTKKVTIADIGCGFGGLMIDLSPAFP----EDLILGMEIRVQVTNYVEDRIIALRNNTASKHG----FQNINVLRGNAM 117 (246)
T ss_dssp CBSCCEEEEEETCTTSHHHHHHHHHST----TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCST----TTTEEEEECCTT
T ss_pred cCCCCCEEEEEcCCCCHHHHHHHHhCC----CCCEEEEEcCHHHHHHHHHHHHHHhhccccccC----CCcEEEEeccHH
Confidence 345788999999999999999999853 479999999999999999998875 4 468999988876
Q ss_pred h-hhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 163 R-MEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 163 ~-l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
+ +...+ +...+|.|+.+++. |..+.......-....+++++.++|||||++++.+
T Consensus 118 ~~l~~~~-~~~~~d~v~~~~p~-p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 118 KFLPNFF-EKGQLSKMFFCFPD-PHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp SCGGGTS-CTTCEEEEEEESCC-CC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHhc-cccccCEEEEECCC-cccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 5 33323 34579999877533 11100000000012589999999999999998865
No 115
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.61 E-value=6.3e-15 Score=126.19 Aligned_cols=107 Identities=20% Similarity=0.171 Sum_probs=87.6
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
..+.++.+|||+|||+|.++..+++.+++ +.+|+++|+++.+++.|+++++..+ ...+++++.++..+. ++
T Consensus 108 ~~~~~~~~VLDiG~G~G~~~~~la~~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~---~~ 178 (277)
T 1o54_A 108 LDVKEGDRIIDTGVGSGAMCAVLARAVGS---SGKVFAYEKREEFAKLAESNLTKWG---LIERVTIKVRDISEG---FD 178 (277)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHTTT---TCEEEEECCCHHHHHHHHHHHHHTT---CGGGEEEECCCGGGC---CS
T ss_pred hCCCCCCEEEEECCcCCHHHHHHHHHhCC---CcEEEEEECCHHHHHHHHHHHHHcC---CCCCEEEEECCHHHc---cc
Confidence 35678899999999999999999998653 5899999999999999999998876 336788888766443 22
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+..||+|+++++. ...+++++.++|+|||++++.+.
T Consensus 179 -~~~~D~V~~~~~~--------------~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 179 -EKDVDALFLDVPD--------------PWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp -CCSEEEEEECCSC--------------GGGTHHHHHHHEEEEEEEEEEES
T ss_pred -CCccCEEEECCcC--------------HHHHHHHHHHHcCCCCEEEEEeC
Confidence 3479999998422 24789999999999999998775
No 116
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.61 E-value=5.3e-15 Score=121.94 Aligned_cols=151 Identities=14% Similarity=0.137 Sum_probs=96.4
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||+|||+|.++..+++.. |+.+|+|+|+|+.|++.+.++++++.......++++++++..++. ..
T Consensus 24 ~~~~~~~vLDiGcG~G~~~~~la~~~----p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~---~~ 96 (218)
T 3mq2_A 24 RSQYDDVVLDVGTGDGKHPYKVARQN----PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP---PL 96 (218)
T ss_dssp HTTSSEEEEEESCTTCHHHHHHHHHC----TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC---SC
T ss_pred hccCCCEEEEecCCCCHHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC---CC
Confidence 46788999999999999999999985 358999999999998864443332110001458999987776543 22
Q ss_pred CCcEEEEEEeCCCCCCCCCcee--echhhHHHHHHHHHhcccCCcEEEEEEecCCC----------CChhhHHHHHHHHH
Q 041272 171 STAVRLVAFNLGYLPGGDKSVI--TTSETTKMALEAAERILIPGGLISMVVYVGHP----------GGREELEAVEAFAR 238 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~----------~~~~~~~~~~~~~~ 238 (267)
+.. |.+...+.+ ... ++.++...+++++.++|||||++++......- ...........+..
T Consensus 97 ~~~-d~v~~~~~~------~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 169 (218)
T 3mq2_A 97 SGV-GELHVLMPW------GSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAP 169 (218)
T ss_dssp CCE-EEEEEESCC------HHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHH
T ss_pred CCC-CEEEEEccc------hhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHH
Confidence 334 666654321 111 13334478999999999999999986532110 00011112222444
Q ss_pred hCCCCceEEEEEeeecC
Q 041272 239 SLSVDDWICCKFQMLNR 255 (267)
Q Consensus 239 ~l~~~~~~~~~~~~~~~ 255 (267)
.+...+|++....++..
T Consensus 170 ~l~~aGf~i~~~~~~~~ 186 (218)
T 3mq2_A 170 RYAEAGWKLADCRYLEP 186 (218)
T ss_dssp HHHHTTEEEEEEEEECH
T ss_pred HHHHcCCCceeeeccch
Confidence 55567898888776643
No 117
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.61 E-value=4.3e-15 Score=129.03 Aligned_cols=115 Identities=11% Similarity=0.110 Sum_probs=78.6
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccccc--ccceEEEecCh------hhhh
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAE--KGLVKLFNMCH------SRME 165 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~--~~~v~~~~~~~------~~l~ 165 (267)
++.+|||||||+|..+..++... ..+|+|+|+|+.|++.|++++...+.+.. .-++++.+.+. .++.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-----~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~ 122 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-----IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVR 122 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-----CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHH
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-----CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhh
Confidence 47899999999998777666542 36899999999999999999876441000 00255655544 3333
Q ss_pred hcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 166 EIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 166 ~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+.. ++.+||+|++.....- ....++...+++++.++|||||++++.+.
T Consensus 123 ~~~-~~~~FD~V~~~~~lhy------~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 123 EVF-YFGKFNIIDWQFAIHY------SFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp TTC-CSSCEEEEEEESCGGG------TCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccc-cCCCeeEEEECchHHH------hCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 222 2458999987742100 00113447999999999999999998876
No 118
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.61 E-value=5.7e-15 Score=124.62 Aligned_cols=105 Identities=15% Similarity=0.169 Sum_probs=86.5
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++..+ +.+|+|+|+|+.|++.|+++. .+++++.++..++. .
T Consensus 30 ~~~~~~~vLdiG~G~G~~~~~l~~~~~----~~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~~----~ 92 (259)
T 2p35_A 30 PLERVLNGYDLGCGPGNSTELLTDRYG----VNVITGIDSDDDMLEKAADRL---------PNTNFGKADLATWK----P 92 (259)
T ss_dssp CCSCCSSEEEETCTTTHHHHHHHHHHC----TTSEEEEESCHHHHHHHHHHS---------TTSEEEECCTTTCC----C
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHhC---------CCcEEEECChhhcC----c
Confidence 356788999999999999999999863 479999999999999999861 46788877665443 3
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
+..||+|+++ .++++.++...+++++.++|||||++++.++.
T Consensus 93 ~~~fD~v~~~---------~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 93 AQKADLLYAN---------AVFQWVPDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp SSCEEEEEEE---------SCGGGSTTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred cCCcCEEEEe---------CchhhCCCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 4589999998 35555667789999999999999999998763
No 119
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.61 E-value=6.9e-15 Score=126.28 Aligned_cols=106 Identities=13% Similarity=0.120 Sum_probs=86.9
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++..++ . +++++.++..++. . +.
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~------g~~v~~vD~s~~~~~~a~~~~~~~~----~-~~~~~~~d~~~~~---~-~~ 183 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLL------GYDVTSWDHNENSIAFLNETKEKEN----L-NISTALYDINAAN---I-QE 183 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTT----C-CEEEEECCGGGCC---C-CS
T ss_pred cCCCcEEEECCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHHHHHcC----C-ceEEEEecccccc---c-cC
Confidence 37889999999999999999987 3699999999999999999998876 2 8888887665433 2 45
Q ss_pred cEEEEEEeCCCCCCCCCceee--chhhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 173 AVRLVAFNLGYLPGGDKSVIT--TSETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
.||+|+++. +.+ ..+....+++++.++|||||++++++...
T Consensus 184 ~fD~i~~~~---------~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 226 (286)
T 3m70_A 184 NYDFIVSTV---------VFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMS 226 (286)
T ss_dssp CEEEEEECS---------SGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred CccEEEEcc---------chhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 899999984 232 23566799999999999999988877643
No 120
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.61 E-value=2.8e-15 Score=129.39 Aligned_cols=117 Identities=14% Similarity=0.152 Sum_probs=82.4
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEE--EEEeCChHHHHHHHHHHhhccccccccceEE--EecChhhhhhc-
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCV--YGLDIQSEALKSTSSLLDKTTSKAEKGLVKL--FNMCHSRMEEI- 167 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v--~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~- 167 (267)
.++.+|||||||+|.++..++..+...+|+..| +|+|+|++|++.|++++.... ...++.+ ...+..++...
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~ 127 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS---NLENVKFAWHKETSSEYQSRM 127 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS---SCTTEEEEEECSCHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc---CCCcceEEEEecchhhhhhhh
Confidence 456799999999998776544332110124544 999999999999999986531 1244444 45444444320
Q ss_pred --CCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 168 --VPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 168 --~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
..++.+||+|++. .++++.++..+++++++++|||||++++....
T Consensus 128 ~~~~~~~~fD~V~~~---------~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 128 LEKKELQKWDFIHMI---------QMLYYVKDIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp HTTTCCCCEEEEEEE---------SCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccccCCCceeEEEEe---------eeeeecCCHHHHHHHHHHHcCCCcEEEEEEec
Confidence 1234579999998 46777778889999999999999999988653
No 121
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.61 E-value=3.9e-15 Score=124.77 Aligned_cols=121 Identities=12% Similarity=0.137 Sum_probs=84.7
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccc--cccccceEEEecChhh-hhhcC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTS--KAEKGLVKLFNMCHSR-MEEIV 168 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~--~~~~~~v~~~~~~~~~-l~~~~ 168 (267)
..++.+|||||||+|.++..+|+..+ +..|+|||+|+.|++.|+++++.... .....|+.+++++..+ +...+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p----~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~ 119 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFP----DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFF 119 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGST----TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHC
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCC----CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhC
Confidence 45677999999999999999998853 58999999999999999998764100 0014689999988765 44333
Q ss_pred CCCCcEEEEEEeCCCCCCCCCceeech--hhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 169 PKSTAVRLVAFNLGYLPGGDKSVITTS--ETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
. +..+|.|+++++. |..... ++. -....+++++.++|||||++++.+.
T Consensus 120 ~-~~~~D~v~~~~~d-p~~k~~--h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 120 Y-KGQLTKMFFLFPD-PHFKRT--KHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp C-TTCEEEEEEESCC--------------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred C-CcCeeEEEEeCCC-chhhhh--hhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 3 4579999887532 111000 000 0114799999999999999998764
No 122
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.61 E-value=3.8e-14 Score=112.72 Aligned_cols=128 Identities=18% Similarity=0.159 Sum_probs=90.3
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|.++..+++. . +|+|+|+|+.|++. . .++++++++..+ ... +.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~------~-~v~gvD~s~~~~~~--------~-----~~~~~~~~d~~~---~~~-~~ 77 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR------N-TVVSTDLNIRALES--------H-----RGGNLVRADLLC---SIN-QE 77 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT------S-EEEEEESCHHHHHT--------C-----SSSCEEECSTTT---TBC-GG
T ss_pred CCCCeEEEeccCccHHHHHHHhc------C-cEEEEECCHHHHhc--------c-----cCCeEEECChhh---hcc-cC
Confidence 46779999999999999999987 4 89999999999987 1 357788766543 222 25
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceEEEEEee
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWICCKFQM 252 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 252 (267)
+||+|++|+++.+..+............+++++.+.| |||+++++.... .....+.++++. .+|.......
T Consensus 78 ~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~-----~~~~~l~~~l~~---~gf~~~~~~~ 148 (170)
T 3q87_B 78 SVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA-----NRPKEVLARLEE---RGYGTRILKV 148 (170)
T ss_dssp GCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG-----GCHHHHHHHHHH---TTCEEEEEEE
T ss_pred CCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC-----CCHHHHHHHHHH---CCCcEEEEEe
Confidence 8999999998876554422222223357888888888 999999987632 234455555554 4566555444
Q ss_pred e
Q 041272 253 L 253 (267)
Q Consensus 253 ~ 253 (267)
.
T Consensus 149 ~ 149 (170)
T 3q87_B 149 R 149 (170)
T ss_dssp E
T ss_pred e
Confidence 3
No 123
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.61 E-value=2.6e-14 Score=127.53 Aligned_cols=127 Identities=9% Similarity=0.126 Sum_probs=90.4
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC---
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS--- 171 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~--- 171 (267)
+.+|||+|||+|.+++.+|+. ..+|+|+|+|+.+++.|++|++.++ ..+++++.++..++.......
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~------~~~V~gvd~~~~ai~~a~~n~~~ng----~~~v~~~~~d~~~~~~~~~~~~~~ 283 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN------FDRVLATEIAKPSVAAAQYNIAANH----IDNVQIIRMAAEEFTQAMNGVREF 283 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG------SSEEEEECCCHHHHHHHHHHHHHTT----CCSEEEECCCSHHHHHHHSSCCCC
T ss_pred CCEEEEccCCCCHHHHHHHhc------CCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEECCHHHHHHHHhhcccc
Confidence 679999999999999999985 3689999999999999999999887 468999998887764322211
Q ss_pred ----------CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCC
Q 041272 172 ----------TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLS 241 (267)
Q Consensus 172 ----------~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~ 241 (267)
..||+|+.|++.. .+.+++.+.|+++|.++++.+.. ....+.+..+.+
T Consensus 284 ~~l~~~~~~~~~fD~Vv~dPPr~---------------g~~~~~~~~l~~~g~ivyvsc~p----~t~ard~~~l~~--- 341 (369)
T 3bt7_A 284 NRLQGIDLKSYQCETIFVDPPRS---------------GLDSETEKMVQAYPRILYISCNP----ETLCKNLETLSQ--- 341 (369)
T ss_dssp TTGGGSCGGGCCEEEEEECCCTT---------------CCCHHHHHHHTTSSEEEEEESCH----HHHHHHHHHHHH---
T ss_pred ccccccccccCCCCEEEECcCcc---------------ccHHHHHHHHhCCCEEEEEECCH----HHHHHHHHHHhh---
Confidence 2699999996542 12345666677888877666521 111222222221
Q ss_pred CCceEEEEEeeecC
Q 041272 242 VDDWICCKFQMLNR 255 (267)
Q Consensus 242 ~~~~~~~~~~~~~~ 255 (267)
+|.+.....++.
T Consensus 342 --~y~~~~~~~~D~ 353 (369)
T 3bt7_A 342 --THKVERLALFDQ 353 (369)
T ss_dssp --HEEEEEEEEECC
T ss_pred --CcEEEEEEeecc
Confidence 487777776655
No 124
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.61 E-value=1.9e-14 Score=119.92 Aligned_cols=109 Identities=9% Similarity=0.143 Sum_probs=87.4
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||+|||+|..+..+++.++ +.+|+++|+++.+++.|+++++..+ ...++.++.++..+.......+
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~----~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~ 124 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALP----EATIVSIERDERRYEEAHKHVKALG---LESRIELLFGDALQLGEKLELY 124 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCT----TCEEEEECCCHHHHHHHHHHHHHTT---CTTTEEEECSCGGGSHHHHTTS
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCC----CCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEECCHHHHHHhcccC
Confidence 45778999999999999999999863 4899999999999999999998876 3457999988776543222113
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
..||+|+++.+. .....+++++.++|||||++++..
T Consensus 125 ~~fD~I~~~~~~------------~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 125 PLFDVLFIDAAK------------GQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp CCEEEEEEEGGG------------SCHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCccEEEECCCH------------HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 479999998421 245689999999999999998864
No 125
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.60 E-value=7.8e-15 Score=119.96 Aligned_cols=107 Identities=16% Similarity=0.102 Sum_probs=84.3
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCc
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTA 173 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~ 173 (267)
++.+|||+|||+|.+++.++... ..+|+|+|+|+.|++.|+++++.++ ..++++++++..+.... ....
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-----~~~V~~vD~s~~~l~~a~~~~~~~~----~~~v~~~~~D~~~~~~~--~~~~ 122 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-----AAGATLIEMDRAVSQQLIKNLATLK----AGNARVVNSNAMSFLAQ--KGTP 122 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-----CSEEEEECSCHHHHHHHHHHHHHTT----CCSEEEECSCHHHHHSS--CCCC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-----CCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEECCHHHHHhh--cCCC
Confidence 57899999999999999887762 2589999999999999999999877 36899998877654322 2347
Q ss_pred EEEEEEeCCCCCCCCCceeechhhHHHHHHHHHh--cccCCcEEEEEEec
Q 041272 174 VRLVAFNLGYLPGGDKSVITTSETTKMALEAAER--ILIPGGLISMVVYV 221 (267)
Q Consensus 174 ~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~--~LkpgG~l~i~~~~ 221 (267)
||+|+++++|. ......+++.+.+ +|||||++++.+..
T Consensus 123 fD~V~~~~p~~----------~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 123 HNIVFVDPPFR----------RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp EEEEEECCSSS----------TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCEEEECCCCC----------CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 99999996542 1233567777765 59999999988774
No 126
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.60 E-value=1.4e-14 Score=116.52 Aligned_cols=135 Identities=15% Similarity=0.053 Sum_probs=95.2
Q ss_pred HHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh
Q 041272 87 VWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE 166 (267)
Q Consensus 87 l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 166 (267)
++...++++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|+++. .++.++..+..++
T Consensus 39 ~l~~~~~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~~D~~~~~~~~a~~~~---------~~~~~~~~d~~~~-- 101 (195)
T 3cgg_A 39 LIDAMAPRGAKILDAGCGQGRIGGYLSKQ------GHDVLGTDLDPILIDYAKQDF---------PEARWVVGDLSVD-- 101 (195)
T ss_dssp HHHHHSCTTCEEEEETCTTTHHHHHHHHT------TCEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTTS--
T ss_pred HHHHhccCCCeEEEECCCCCHHHHHHHHC------CCcEEEEcCCHHHHHHHHHhC---------CCCcEEEcccccC--
Confidence 44445778899999999999999999987 369999999999999999864 3467777665443
Q ss_pred cCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceE
Q 041272 167 IVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWI 246 (267)
Q Consensus 167 ~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 246 (267)
..++..||+|+++...+. ....+....+++++.++|||||++++......... ...+...++ ..+|.
T Consensus 102 -~~~~~~~D~i~~~~~~~~------~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~---~~~~~~~l~---~~Gf~ 168 (195)
T 3cgg_A 102 -QISETDFDLIVSAGNVMG------FLAEDGREPALANIHRALGADGRAVIGFGAGRGWV---FGDFLEVAE---RVGLE 168 (195)
T ss_dssp -CCCCCCEEEEEECCCCGG------GSCHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCC---HHHHHHHHH---HHTEE
T ss_pred -CCCCCceeEEEECCcHHh------hcChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcC---HHHHHHHHH---HcCCE
Confidence 223457999998732211 11235568999999999999999998876433212 233333333 34677
Q ss_pred EEEEe
Q 041272 247 CCKFQ 251 (267)
Q Consensus 247 ~~~~~ 251 (267)
+....
T Consensus 169 ~~~~~ 173 (195)
T 3cgg_A 169 LENAF 173 (195)
T ss_dssp EEEEE
T ss_pred Eeeee
Confidence 76653
No 127
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.60 E-value=5.6e-15 Score=118.48 Aligned_cols=111 Identities=17% Similarity=0.134 Sum_probs=85.5
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh-cCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE-IVPKS 171 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~-~~~~~ 171 (267)
.++.+|||+|||+|.++..+++. + ..+|+|+|+++.+++.|++++..++ ...++++++++..+... ....+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~----~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~ 114 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-G----MDKSICIEKNFAALKVIKENIAITK---EPEKFEVRKMDANRALEQFYEEK 114 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-T----CSEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEESCHHHHHHHHHHTT
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-C----CCEEEEEECCHHHHHHHHHHHHHhC---CCcceEEEECcHHHHHHHHHhcC
Confidence 46789999999999999998875 2 3699999999999999999998876 34689999988776433 21123
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHH--HhcccCCcEEEEEEec
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAA--ERILIPGGLISMVVYV 221 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~--~~~LkpgG~l~i~~~~ 221 (267)
..||+|++++++.. ......++.+ .++|||||++++....
T Consensus 115 ~~fD~i~~~~~~~~----------~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 115 LQFDLVLLDPPYAK----------QEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp CCEEEEEECCCGGG----------CCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCCEEEECCCCCc----------hhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 47999999965421 1224556666 8899999999987764
No 128
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.60 E-value=4e-14 Score=117.56 Aligned_cols=134 Identities=10% Similarity=0.100 Sum_probs=100.6
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
..++++.+|||+|||+|++++.+++.. |..+|+|+|+++.+++.|++|++.++ ...+++++.+|.. +.+.
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~----~~~~V~AvDi~~~al~~A~~N~~~~g---l~~~I~~~~gD~l---~~~~ 86 (230)
T 3lec_A 17 NYVPKGARLLDVGSDHAYLPIFLLQMG----YCDFAIAGEVVNGPYQSALKNVSEHG---LTSKIDVRLANGL---SAFE 86 (230)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTT----CEEEEEEEESSHHHHHHHHHHHHHTT---CTTTEEEEECSGG---GGCC
T ss_pred HhCCCCCEEEEECCchHHHHHHHHHhC----CCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEECchh---hccc
Confidence 456788999999999999999999873 24789999999999999999999988 4567999986653 3333
Q ss_pred CCCcEEEEE-EeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceEEE
Q 041272 170 KSTAVRLVA-FNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWICC 248 (267)
Q Consensus 170 ~~~~~d~ii-~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 248 (267)
++..||+|+ .+++ ......++.+..+.|+++|+|++.-.. ....+.+|+... +|.+.
T Consensus 87 ~~~~~D~IviaGmG------------g~lI~~IL~~~~~~l~~~~~lIlqp~~-------~~~~lr~~L~~~---Gf~i~ 144 (230)
T 3lec_A 87 EADNIDTITICGMG------------GRLIADILNNDIDKLQHVKTLVLQPNN-------REDDLRKWLAAN---DFEIV 144 (230)
T ss_dssp GGGCCCEEEEEEEC------------HHHHHHHHHHTGGGGTTCCEEEEEESS-------CHHHHHHHHHHT---TEEEE
T ss_pred cccccCEEEEeCCc------------hHHHHHHHHHHHHHhCcCCEEEEECCC-------ChHHHHHHHHHC---CCEEE
Confidence 333588765 4432 234567888999999999998776542 245677777764 57777
Q ss_pred EEeeecC
Q 041272 249 KFQMLNR 255 (267)
Q Consensus 249 ~~~~~~~ 255 (267)
....+..
T Consensus 145 ~E~lv~e 151 (230)
T 3lec_A 145 AEDILTE 151 (230)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 6665544
No 129
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.60 E-value=2.3e-14 Score=121.23 Aligned_cols=146 Identities=14% Similarity=0.146 Sum_probs=97.7
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccc-----------------------
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSK----------------------- 148 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~----------------------- 148 (267)
..++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|++++...+..
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~-----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACES-----FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEK 128 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGT-----EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhcc-----cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHH
Confidence 3567899999999999999988762 148999999999999999988653200
Q ss_pred --ccccce-EEEecChhhhhhcCC-CCCcEEEEEEeCCCCCCCCCceee----chhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 149 --AEKGLV-KLFNMCHSRMEEIVP-KSTAVRLVAFNLGYLPGGDKSVIT----TSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 149 --~~~~~v-~~~~~~~~~l~~~~~-~~~~~d~ii~~~~~lp~~d~~~~~----~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
....++ .++..+..+...... ....||+|++.. +++ +.++...+++++.++|||||++++.+.
T Consensus 129 ~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~---------~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 129 EEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTL---------CLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEES---------CHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhh---------hhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 000126 777766654332111 115799999983 344 456788999999999999999999875
Q ss_pred cCCCC----------ChhhHHHHHHHHHhCCCCceEEEEEeeec
Q 041272 221 VGHPG----------GREELEAVEAFARSLSVDDWICCKFQMLN 254 (267)
Q Consensus 221 ~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 254 (267)
..... .......+...++ ..+|+++......
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~aGf~~~~~~~~~ 240 (265)
T 2i62_A 200 LKSSYYMIGEQKFSSLPLGWETVRDAVE---EAGYTIEQFEVIS 240 (265)
T ss_dssp SSCCEEEETTEEEECCCCCHHHHHHHHH---HTTCEEEEEEEEC
T ss_pred CCCceEEcCCccccccccCHHHHHHHHH---HCCCEEEEEEEec
Confidence 32110 0012233444444 4578877766554
No 130
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.60 E-value=6.4e-15 Score=120.33 Aligned_cols=109 Identities=19% Similarity=0.231 Sum_probs=84.5
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|..+..++... +.+|+|+|+|+.+++.|++++...+ .++.+++.+..++ ..+
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~---~~~ 86 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVED-----GYKTYGIEISDLQLKKAENFSRENN-----FKLNISKGDIRKL---PFK 86 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHHT-----TCEEEEEECCHHHHHHHHHHHHHHT-----CCCCEEECCTTSC---CSC
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHhC-----CCEEEEEECCHHHHHHHHHHHHhcC-----CceEEEECchhhC---CCC
Confidence 35678899999999999855444432 4799999999999999999987755 4678887665443 233
Q ss_pred CCcEEEEEEeCCCCCCCCCceeec--hhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITT--SETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~--~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
+..||+|++.. +.++ .++..++++++.++|||||++++..+.
T Consensus 87 ~~~fD~v~~~~---------~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 87 DESMSFVYSYG---------TIFHMRKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp TTCEEEEEECS---------CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCceeEEEEcC---------hHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 45899999872 2332 367789999999999999999998764
No 131
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.59 E-value=3e-14 Score=119.31 Aligned_cols=135 Identities=10% Similarity=0.168 Sum_probs=98.9
Q ss_pred hhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcC
Q 041272 89 KHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIV 168 (267)
Q Consensus 89 ~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 168 (267)
...++++.+|||||||+|.+++.+++.. |..+|+|+|+++.+++.|++|++.++ ...+++++.+|. .+.+
T Consensus 16 ~~~v~~g~~VlDIGtGsG~l~i~la~~~----~~~~V~avDi~~~al~~A~~N~~~~g---l~~~I~v~~gD~---l~~~ 85 (244)
T 3gnl_A 16 ASYITKNERIADIGSDHAYLPCFAVKNQ----TASFAIAGEVVDGPFQSAQKQVRSSG---LTEQIDVRKGNG---LAVI 85 (244)
T ss_dssp HTTCCSSEEEEEETCSTTHHHHHHHHTT----SEEEEEEEESSHHHHHHHHHHHHHTT---CTTTEEEEECSG---GGGC
T ss_pred HHhCCCCCEEEEECCccHHHHHHHHHhC----CCCEEEEEECCHHHHHHHHHHHHHcC---CCceEEEEecch---hhcc
Confidence 3457788999999999999999999873 24789999999999999999999988 456799998665 3333
Q ss_pred CCCCcEEEEEE-eCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceEE
Q 041272 169 PKSTAVRLVAF-NLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWIC 247 (267)
Q Consensus 169 ~~~~~~d~ii~-~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 247 (267)
.++..||+|+. +++ ......++.++.+.|+++|+|++.-.. ....+.+|+... +|.+
T Consensus 86 ~~~~~~D~IviagmG------------g~lI~~IL~~~~~~L~~~~~lIlq~~~-------~~~~lr~~L~~~---Gf~i 143 (244)
T 3gnl_A 86 EKKDAIDTIVIAGMG------------GTLIRTILEEGAAKLAGVTKLILQPNI-------AAWQLREWSEQN---NWLI 143 (244)
T ss_dssp CGGGCCCEEEEEEEC------------HHHHHHHHHHTGGGGTTCCEEEEEESS-------CHHHHHHHHHHH---TEEE
T ss_pred CccccccEEEEeCCc------------hHHHHHHHHHHHHHhCCCCEEEEEcCC-------ChHHHHHHHHHC---CCEE
Confidence 33224887754 321 234567889999999999999876542 245666777653 5666
Q ss_pred EEEeeecC
Q 041272 248 CKFQMLNR 255 (267)
Q Consensus 248 ~~~~~~~~ 255 (267)
..-..+..
T Consensus 144 ~~E~lv~e 151 (244)
T 3gnl_A 144 TSEAILRE 151 (244)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 55554433
No 132
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.59 E-value=2.7e-14 Score=129.97 Aligned_cols=132 Identities=14% Similarity=0.114 Sum_probs=94.0
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh-cCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE-IVPK 170 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~-~~~~ 170 (267)
+.++.+|||+|||+|.++..+|+. ..+|+|+|+|+++++.|++|++.++ ..++++++++..+... ....
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~------~~~V~gvD~s~~al~~A~~n~~~~~----~~~v~f~~~d~~~~l~~~~~~ 353 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ------AASVVGVEGVPALVEKGQQNARLNG----LQNVTFYHENLEEDVTKQPWA 353 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT------SSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCTTSCCSSSGGG
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh------CCEEEEEeCCHHHHHHHHHHHHHcC----CCceEEEECCHHHHhhhhhhh
Confidence 457789999999999999999987 3799999999999999999999887 4589999987765322 1112
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceEEEEE
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWICCKF 250 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 250 (267)
+..||+|++|+++... .++++.+.+ ++|++++++++.+. ...+.+ ..+...+|.+...
T Consensus 354 ~~~fD~Vv~dPPr~g~------------~~~~~~l~~-~~p~~ivyvsc~p~-----tlard~----~~l~~~Gy~~~~~ 411 (433)
T 1uwv_A 354 KNGFDKVLLDPARAGA------------AGVMQQIIK-LEPIRIVYVSCNPA-----TLARDS----EALLKAGYTIARL 411 (433)
T ss_dssp TTCCSEEEECCCTTCC------------HHHHHHHHH-HCCSEEEEEESCHH-----HHHHHH----HHHHHTTCEEEEE
T ss_pred cCCCCEEEECCCCccH------------HHHHHHHHh-cCCCeEEEEECChH-----HHHhhH----HHHHHCCcEEEEE
Confidence 3479999999766321 245555554 69999999887632 111222 2222346777766
Q ss_pred eeecC
Q 041272 251 QMLNR 255 (267)
Q Consensus 251 ~~~~~ 255 (267)
..++.
T Consensus 412 ~~~d~ 416 (433)
T 1uwv_A 412 AMLDM 416 (433)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 65554
No 133
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.59 E-value=8.1e-15 Score=119.93 Aligned_cols=122 Identities=16% Similarity=0.171 Sum_probs=89.0
Q ss_pred hHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhh
Q 041272 85 NGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRM 164 (267)
Q Consensus 85 ~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l 164 (267)
..++...+.++.+|||+|||+|.++..+++.. . .+|+|+|+|+.+++.|+++... ..+++++.++..++
T Consensus 33 ~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~-~----~~v~~~D~s~~~~~~a~~~~~~------~~~i~~~~~d~~~~ 101 (215)
T 2pxx_A 33 RALLEPELRPEDRILVLGCGNSALSYELFLGG-F----PNVTSVDYSSVVVAAMQACYAH------VPQLRWETMDVRKL 101 (215)
T ss_dssp HHHHGGGCCTTCCEEEETCTTCSHHHHHHHTT-C----CCEEEEESCHHHHHHHHHHTTT------CTTCEEEECCTTSC
T ss_pred HHHHHHhcCCCCeEEEECCCCcHHHHHHHHcC-C----CcEEEEeCCHHHHHHHHHhccc------CCCcEEEEcchhcC
Confidence 34444456788999999999999999999872 1 3899999999999999998764 25788887766544
Q ss_pred hhcCCCCCcEEEEEEeCCC--CCCCCCce----eechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 165 EEIVPKSTAVRLVAFNLGY--LPGGDKSV----ITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~--lp~~d~~~----~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
..++..||+|+++... +....... ..+.....++++++.++|||||++++.++
T Consensus 102 ---~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 102 ---DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp ---CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ---CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 2334579999987421 11000000 01245668999999999999999999887
No 134
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.59 E-value=1.4e-14 Score=118.83 Aligned_cols=106 Identities=14% Similarity=0.100 Sum_probs=86.0
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|..+..+++.++. +.+|+++|+++.+++.|+++++..+ ...+++++.++..+..... +.
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~--~~ 126 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISI---SSRVVMIDPDRDNVEHARRMLHDNG---LIDRVELQVGDPLGIAAGQ--RD 126 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCT---TCEEEEEESCHHHHHHHHHHHHHHS---GGGGEEEEESCHHHHHTTC--CS
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHCC---CCceEEEEEecHHHHhccC--CC
Confidence 45779999999999999999998653 5899999999999999999998876 3467999988876543322 24
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
||+|+.+.. ......+++++.++|||||++++..
T Consensus 127 -fD~v~~~~~------------~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 127 -IDILFMDCD------------VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp -EEEEEEETT------------TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred -CCEEEEcCC------------hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 999999832 1344689999999999999998754
No 135
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.59 E-value=2.8e-14 Score=121.57 Aligned_cols=117 Identities=14% Similarity=0.122 Sum_probs=87.9
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChH------HHHHHHHHHhhccccccccceEEEecC-hhh
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSE------ALKSTSSLLDKTTSKAEKGLVKLFNMC-HSR 163 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~------~i~~a~~~~~~~~~~~~~~~v~~~~~~-~~~ 163 (267)
.++++.+|||||||+|.++..+++..++ ..+|+|+|+|+. +++.|++++...+ ...+++++..+ ...
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~g~---~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~ 113 (275)
T 3bkx_A 40 QVKPGEKILEIGCGQGDLSAVLADQVGS---SGHVTGIDIASPDYGAPLTLGQAWNHLLAGP---LGDRLTVHFNTNLSD 113 (275)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCT---TCEEEEECSSCTTCCSSSCHHHHHHHHHTST---TGGGEEEECSCCTTT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCC---CCEEEEEECCccccccHHHHHHHHHHHHhcC---CCCceEEEECChhhh
Confidence 4678999999999999999999998643 479999999997 9999999998766 34689998876 111
Q ss_pred hhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCC
Q 041272 164 MEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGH 223 (267)
Q Consensus 164 l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 223 (267)
.....++.+||+|+++. ++++.++...+++.+.++++|||++++.++...
T Consensus 114 -~~~~~~~~~fD~v~~~~---------~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 114 -DLGPIADQHFDRVVLAH---------SLWYFASANALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp -CCGGGTTCCCSEEEEES---------CGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred -ccCCCCCCCEEEEEEcc---------chhhCCCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 11122345799999883 444444445677777777777999999887543
No 136
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.59 E-value=3.1e-14 Score=119.22 Aligned_cols=110 Identities=13% Similarity=0.186 Sum_probs=87.4
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh-cCC-
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE-IVP- 169 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~-~~~- 169 (267)
+.++.+|||+|||+|..+..+++.++. +.+|+++|+++.+++.|+++++..+ ...+++++.++..+... ...
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~g---~~~~v~~~~~d~~~~~~~~~~~ 131 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPE---DGKILCCDVSEEWTNVARKYWKENG---LENKIFLKLGSALETLQVLIDS 131 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCT---TCEEEEEESCHHHHHHHHHHHHHTT---CGGGEEEEESCHHHHHHHHHHC
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcC---CCCCEEEEECCHHHHHHHHHhh
Confidence 457889999999999999999998753 5799999999999999999998876 34569999888765322 211
Q ss_pred ----------C-C-CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 170 ----------K-S-TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 170 ----------~-~-~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
+ + ..||+|+.+.. .+....+++++.++|||||++++..
T Consensus 132 ~~~~~~~~~f~~~~~~fD~I~~~~~------------~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 132 KSAPSWASDFAFGPSSIDLFFLDAD------------KENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp SSCCGGGTTTCCSTTCEEEEEECSC------------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccccccccccCCCCCcCEEEEeCC------------HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 1 47999998831 2445688999999999999999865
No 137
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.59 E-value=3.2e-15 Score=125.43 Aligned_cols=109 Identities=15% Similarity=0.144 Sum_probs=85.0
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcC--
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIV-- 168 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-- 168 (267)
.+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|++++.. .++++++++..++....
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~------~~v~gvD~s~~~~~~a~~~~~~-------~~~~~~~~d~~~~~~~~~~ 119 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFF------PRVIGLDVSKSALEIAAKENTA-------ANISYRLLDGLVPEQAAQI 119 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHS------SCEEEEESCHHHHHHHHHHSCC-------TTEEEEECCTTCHHHHHHH
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhC------CCEEEEECCHHHHHHHHHhCcc-------cCceEEECccccccccccc
Confidence 36788999999999999999999983 4899999999999999998732 47889887776543321
Q ss_pred CCCCcEEEEEEeCCCCCCCCCceeech--hhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 169 PKSTAVRLVAFNLGYLPGGDKSVITTS--ETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
.....||+|+++. ++++. ++...+++++.++|||||++++.++.
T Consensus 120 ~~~~~~d~v~~~~---------~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 120 HSEIGDANIYMRT---------GFHHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp HHHHCSCEEEEES---------SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred ccccCccEEEEcc---------hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 1111378888873 33333 36789999999999999999988874
No 138
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.59 E-value=2.1e-14 Score=124.97 Aligned_cols=115 Identities=19% Similarity=0.178 Sum_probs=85.9
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccc---ccccceEEEecChhhhh---
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSK---AEKGLVKLFNMCHSRME--- 165 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~---~~~~~v~~~~~~~~~l~--- 165 (267)
++++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|+++....+.. ....+++++++|..++.
T Consensus 32 ~~~~~~VLDlGcG~G~~~~~l~~~~-----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 106 (313)
T 3bgv_A 32 KKRDITVLDLGCGKGGDLLKWKKGR-----INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLID 106 (313)
T ss_dssp C--CCEEEEETCTTTTTHHHHHHTT-----CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTT
T ss_pred cCCCCEEEEECCCCcHHHHHHHhcC-----CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhh
Confidence 3477899999999999999999752 479999999999999999988753100 01247888887776543
Q ss_pred hcCCCCCcEEEEEEeCCCCCCCCCceeec----hhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 166 EIVPKSTAVRLVAFNLGYLPGGDKSVITT----SETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 166 ~~~~~~~~~d~ii~~~~~lp~~d~~~~~~----~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+..++.+||+|+++. ++++ .++...+++++.++|||||++++..+
T Consensus 107 ~~~~~~~~fD~V~~~~---------~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 107 KFRDPQMCFDICSCQF---------VCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp TCSSTTCCEEEEEEET---------CGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hcccCCCCEEEEEEec---------chhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 1221234799999984 3332 35667999999999999999999877
No 139
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.59 E-value=1.6e-14 Score=131.76 Aligned_cols=138 Identities=17% Similarity=0.224 Sum_probs=102.2
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||+|||+|..+..+|+.++. .++|+++|+|+.+++.+++|+++.+ .. +.++++|..++....
T Consensus 98 ~~~~g~~VLDlgaGpG~kt~~LA~~~~~---~g~V~AvDis~~~l~~a~~n~~r~G----~~-v~~~~~Da~~l~~~~-- 167 (464)
T 3m6w_A 98 DPKPGERVLDLAAAPGGKTTHLAARMGG---KGLLLANEVDGKRVRGLLENVERWG----AP-LAVTQAPPRALAEAF-- 167 (464)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTT---CSEEEEECSCHHHHHHHHHHHHHHC----CC-CEEECSCHHHHHHHH--
T ss_pred CcCCCCEEEEEcCCcCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcC----Ce-EEEEECCHHHhhhhc--
Confidence 3568999999999999999999998754 4799999999999999999999988 44 889988887776433
Q ss_pred CCcEEEEEEeCCCCCCC-----CCcee--------echhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHH
Q 041272 171 STAVRLVAFNLGYLPGG-----DKSVI--------TTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFA 237 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~-----d~~~~--------~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 237 (267)
...||.|++|+++.... ..... .......++++++.++|||||+|+++++.-.+ .+....+..++
T Consensus 168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~--eEne~vv~~~l 245 (464)
T 3m6w_A 168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP--EENEGVVAHFL 245 (464)
T ss_dssp CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG--GGTHHHHHHHH
T ss_pred cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch--hcCHHHHHHHH
Confidence 24799999997762111 10101 11233478999999999999999987764322 23345566666
Q ss_pred HhC
Q 041272 238 RSL 240 (267)
Q Consensus 238 ~~l 240 (267)
+..
T Consensus 246 ~~~ 248 (464)
T 3m6w_A 246 KAH 248 (464)
T ss_dssp HHC
T ss_pred HHC
Confidence 654
No 140
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.59 E-value=9.7e-15 Score=121.92 Aligned_cols=104 Identities=18% Similarity=0.210 Sum_probs=83.5
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|..+..+++. + ..+|+|+|+|+.+++.|+++... .+++++.++..++ ..++.
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~-~----~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~d~~~~---~~~~~ 106 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEH-G----ASYVLGLDLSEKMLARARAAGPD-------TGITYERADLDKL---HLPQD 106 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T----CSEEEEEESCHHHHHHHHHTSCS-------SSEEEEECCGGGC---CCCTT
T ss_pred cCCCEEEEEcCcCCHHHHHHHHC-C----CCeEEEEcCCHHHHHHHHHhccc-------CCceEEEcChhhc---cCCCC
Confidence 47889999999999999999987 2 13999999999999999987653 3678887666543 23345
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.||+|++.. ++++.++...+++++.++|||||++++...
T Consensus 107 ~fD~v~~~~---------~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 107 SFDLAYSSL---------ALHYVEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp CEEEEEEES---------CGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CceEEEEec---------cccccchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 899999883 444455678999999999999999998764
No 141
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.58 E-value=2.7e-14 Score=120.12 Aligned_cols=107 Identities=19% Similarity=0.253 Sum_probs=83.9
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
.+++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|++++...+ .++.+++++..++. . .
T Consensus 39 ~~~~~~vLDlGcG~G~~~~~l~~~------~~~v~gvD~s~~~l~~a~~~~~~~~-----~~v~~~~~d~~~~~---~-~ 103 (252)
T 1wzn_A 39 KREVRRVLDLACGTGIPTLELAER------GYEVVGLDLHEEMLRVARRKAKERN-----LKIEFLQGDVLEIA---F-K 103 (252)
T ss_dssp SSCCCEEEEETCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTT-----CCCEEEESCGGGCC---C-C
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHHHHhcC-----CceEEEECChhhcc---c-C
Confidence 356789999999999999999987 4699999999999999999998765 36888887665432 2 2
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
..||+|++....+ .....+...++++++.++|||||++++..
T Consensus 104 ~~fD~v~~~~~~~------~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 104 NEFDAVTMFFSTI------MYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp SCEEEEEECSSGG------GGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCccEEEEcCCch------hcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 4799999753211 11134567899999999999999998754
No 142
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.58 E-value=8.1e-15 Score=122.70 Aligned_cols=103 Identities=12% Similarity=0.052 Sum_probs=81.6
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++ ++++..+..+....+ +
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~------------~~~~~~d~~~~~~~~-~ 98 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEE------GIESIGVDINEDMIKFCEGK------------FNVVKSDAIEYLKSL-P 98 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHH------TCCEEEECSCHHHHHHHHTT------------SEEECSCHHHHHHTS-C
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhC------CCcEEEEECCHHHHHHHHhh------------cceeeccHHHHhhhc-C
Confidence 3567899999999999999999987 36899999999999999874 556666665543222 3
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechh--hHHHHHHHHHhcccCCcEEEEEEec
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSE--TTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
+.+||+|++. .++++.+ +...+++++.++|||||++++....
T Consensus 99 ~~~fD~i~~~---------~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 99 DKYLDGVMIS---------HFVEHLDPERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp TTCBSEEEEE---------SCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred CCCeeEEEEC---------CchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 4589999988 3444433 5589999999999999999998764
No 143
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.58 E-value=9.8e-15 Score=124.89 Aligned_cols=152 Identities=14% Similarity=0.066 Sum_probs=104.4
Q ss_pred ccccCCCCCCCCCCcchhHHHHhhHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHH
Q 041272 62 NNCTPLPLCKDSPLSGTLITIAANGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSL 141 (267)
Q Consensus 62 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~ 141 (267)
+.|........+.++..+..+- .-+...+++|.+|||+|||+|.+++.+|+.. +++|+++|+|+.+++.+++|
T Consensus 95 ~G~~~~~D~~k~~f~~~~~~er--~ri~~~~~~g~~VlD~~aG~G~~~i~~a~~g-----~~~V~avD~np~a~~~~~~N 167 (278)
T 3k6r_A 95 NGIKYKLDVAKIMFSPANVKER--VRMAKVAKPDELVVDMFAGIGHLSLPIAVYG-----KAKVIAIEKDPYTFKFLVEN 167 (278)
T ss_dssp TTEEEEEETTTSCCCGGGHHHH--HHHHHHCCTTCEEEETTCTTTTTTHHHHHHT-----CCEEEEECCCHHHHHHHHHH
T ss_pred CCEEEEEeccceEEcCCcHHHH--HHHHHhcCCCCEEEEecCcCcHHHHHHHHhc-----CCeEEEEECCHHHHHHHHHH
Confidence 3343333333444433333332 2233457899999999999999999999872 36999999999999999999
Q ss_pred HhhccccccccceEEEecChhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 142 LDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 142 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
++.++ ..++++++++|..++. ....||.|+++++. ...+++..+.++||+||++.+.++.
T Consensus 168 ~~~N~---v~~~v~~~~~D~~~~~----~~~~~D~Vi~~~p~-------------~~~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 168 IHLNK---VEDRMSAYNMDNRDFP----GENIADRILMGYVV-------------RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp HHHTT---CTTTEEEECSCTTTCC----CCSCEEEEEECCCS-------------SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHcC---CCCcEEEEeCcHHHhc----cccCCCEEEECCCC-------------cHHHHHHHHHHHcCCCCEEEEEeee
Confidence 99998 5678999988765442 24579999999532 1136788899999999999876653
Q ss_pred CCCCC-hhhHHHHHHHHHhC
Q 041272 222 GHPGG-REELEAVEAFARSL 240 (267)
Q Consensus 222 ~~~~~-~~~~~~~~~~~~~l 240 (267)
..... ....+.+++.....
T Consensus 228 ~e~~~~~~~~e~i~~~~~~~ 247 (278)
T 3k6r_A 228 PEKLMPREPFETFKRITKEY 247 (278)
T ss_dssp EGGGTTTTTHHHHHHHHHHT
T ss_pred cccccchhHHHHHHHHHHHc
Confidence 22111 11234455555544
No 144
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.58 E-value=4.4e-14 Score=117.94 Aligned_cols=138 Identities=15% Similarity=0.156 Sum_probs=99.3
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhh-hhcCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRM-EEIVPKS 171 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l-~~~~~~~ 171 (267)
.++.+|||+|||+|+.+..+++.++. +++|+++|+++.+++.|+++++..+ ...+++++.++..+. ......+
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~---~~~v~~iD~~~~~~~~a~~~~~~~g---~~~~i~~~~~d~~~~l~~l~~~~ 144 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPP---DGQIIACDQDPNATAIAKKYWQKAG---VAEKISLRLGPALATLEQLTQGK 144 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCT---TCEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEESCHHHHHHHHHTSS
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHHHHhcC
Confidence 46779999999999999999998753 5799999999999999999998877 346799998887653 3332222
Q ss_pred --CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCC--C----CChhhHHHHHHHHHhCCC-
Q 041272 172 --TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGH--P----GGREELEAVEAFARSLSV- 242 (267)
Q Consensus 172 --~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~--~----~~~~~~~~~~~~~~~l~~- 242 (267)
..||+|+.+.. ......+++++.++|||||++++...... . ........+.++.+.+..
T Consensus 145 ~~~~fD~V~~d~~------------~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 212 (232)
T 3cbg_A 145 PLPEFDLIFIDAD------------KRNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQD 212 (232)
T ss_dssp SCCCEEEEEECSC------------GGGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTC
T ss_pred CCCCcCEEEECCC------------HHHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhC
Confidence 57999998831 24567899999999999999988543211 0 112234455666655433
Q ss_pred CceEEE
Q 041272 243 DDWICC 248 (267)
Q Consensus 243 ~~~~~~ 248 (267)
..+...
T Consensus 213 ~~~~~~ 218 (232)
T 3cbg_A 213 ERVRIS 218 (232)
T ss_dssp TTEEEE
T ss_pred CCeEEE
Confidence 334433
No 145
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.58 E-value=1.1e-14 Score=122.77 Aligned_cols=110 Identities=10% Similarity=0.120 Sum_probs=88.1
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC--
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP-- 169 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-- 169 (267)
..++.+|||||||+|+.+..+++.++. +++|+++|+++++++.|+++++..+ ...+++++.++..+....+.
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~---~~~v~~iD~s~~~~~~a~~~~~~~g---~~~~i~~~~gda~~~l~~l~~~ 150 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPE---DGKILAMDINKENYELGLPVIKKAG---VDHKIDFREGPALPVLDEMIKD 150 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCT---TCEEEEEESCCHHHHHHHHHHHHTT---CGGGEEEEESCHHHHHHHHHHS
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcC---CCCCeEEEECCHHHHHHHHHhc
Confidence 346679999999999999999998753 5899999999999999999998877 35689999988765433221
Q ss_pred --CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 170 --KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 170 --~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
....||+|+.+.. ......+++++.++|||||++++..
T Consensus 151 ~~~~~~fD~V~~d~~------------~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 151 EKNHGSYDFIFVDAD------------KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp GGGTTCBSEEEECSC------------STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred cCCCCCEEEEEEcCc------------hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 1247999998832 1345789999999999999998754
No 146
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.58 E-value=7.9e-15 Score=126.24 Aligned_cols=113 Identities=12% Similarity=0.151 Sum_probs=77.1
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccc-----------ccc-----------
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSK-----------AEK----------- 151 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~-----------~~~----------- 151 (267)
++.+|||||||+|..+..++... +.+|+|+|+|+.|++.|++++++.... ...
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~-----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 145 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH-----FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKER 145 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG-----CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccC-----CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHH
Confidence 67899999999999655444432 369999999999999999976532100 000
Q ss_pred ----cceEEEecChhhhhhc---CCCCCcEEEEEEeCCCCCCCCCceeec----hhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 152 ----GLVKLFNMCHSRMEEI---VPKSTAVRLVAFNLGYLPGGDKSVITT----SETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 152 ----~~v~~~~~~~~~l~~~---~~~~~~~d~ii~~~~~lp~~d~~~~~~----~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
..++++..+..+...+ ..++.+||+|+++. ++++ .++..++++++.++|||||+|++...
T Consensus 146 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~---------~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 146 QLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAF---------CLEAVSPDLASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp HHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEES---------CHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHhhhceEEecccCCCCCccccccCCCCCCEEEehh---------hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 0134454444331111 11234699999983 4444 56788999999999999999998753
No 147
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.58 E-value=7.9e-15 Score=123.70 Aligned_cols=120 Identities=15% Similarity=0.095 Sum_probs=86.1
Q ss_pred CCCEEEEecCCCChHHHHHHHh--cCCCCCCcEEEEEeCChHHHHHHHHHHhhc---cccccccc---------------
Q 041272 94 KGDTVVDATCGNGYDTLMMLKM--VADESSAGCVYGLDIQSEALKSTSSLLDKT---TSKAEKGL--------------- 153 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~--~~~~~p~~~v~giD~s~~~i~~a~~~~~~~---~~~~~~~~--------------- 153 (267)
++.+|||+|||+|.++..+++. .+ +.+|+|+|+|+.+++.|++++... + ...+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~----~~~v~gvDis~~~l~~A~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 123 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRS----LRQVIASDVDPAPLELAAKNLALLSPAG---LTARELERREQSERFGKPS 123 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGG----EEEEEEEESCHHHHHHHHHHHHTTSHHH---HHHHHHHHHHHHHHHCCHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccC----CCeEEEEECCHHHHHHHHHHHHHhhhcc---ccccchhhhhhhhhccccc
Confidence 5679999999999999999987 32 479999999999999999998765 3 1111
Q ss_pred ----------eE-------------EEecChhhhhhc--CCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhc
Q 041272 154 ----------VK-------------LFNMCHSRMEEI--VPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERI 208 (267)
Q Consensus 154 ----------v~-------------~~~~~~~~l~~~--~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~ 208 (267)
++ +++++..+.... ......||+|++|+++....+............+++++.++
T Consensus 124 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~ 203 (250)
T 1o9g_A 124 YLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASA 203 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHH
T ss_pred chhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHh
Confidence 55 777665432210 00223699999998775543211111245667899999999
Q ss_pred ccCCcEEEEEEe
Q 041272 209 LIPGGLISMVVY 220 (267)
Q Consensus 209 LkpgG~l~i~~~ 220 (267)
|||||+++++..
T Consensus 204 LkpgG~l~~~~~ 215 (250)
T 1o9g_A 204 LPAHAVIAVTDR 215 (250)
T ss_dssp SCTTCEEEEEES
T ss_pred cCCCcEEEEeCc
Confidence 999999998443
No 148
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.58 E-value=8.4e-15 Score=130.57 Aligned_cols=124 Identities=13% Similarity=-0.020 Sum_probs=90.5
Q ss_pred HHHhhHHH-hhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHh-------hcccccc-c
Q 041272 81 TIAANGVW-KHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLD-------KTTSKAE-K 151 (267)
Q Consensus 81 ~~~~~~l~-~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~-------~~~~~~~-~ 151 (267)
......++ ...+.++++|||||||+|.+++.+|...+. .+|+|||+++.+++.|+++++ ..+ . .
T Consensus 159 ~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~----~kVvGIDiS~~~lelAr~n~e~frkr~~~~G---l~~ 231 (438)
T 3uwp_A 159 FDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNC----KHHYGVEKADIPAKYAETMDREFRKWMKWYG---KKH 231 (438)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCC----SEEEEEECCHHHHHHHHHHHHHHHHHHHHHT---BCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCC----CEEEEEeCCHHHHHHHHHHHHHHHHHHHHhC---CCC
Confidence 33333333 345789999999999999999999987643 579999999999999998753 223 1 2
Q ss_pred cceEEEecChhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 152 GLVKLFNMCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 152 ~~v~~~~~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
.+++|+++|..++.-.. .-..+|+|++|..+ + .++..+.|+++++.|||||+|++.....
T Consensus 232 ~rVefi~GD~~~lp~~d-~~~~aDVVf~Nn~~---------F-~pdl~~aL~Ei~RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 232 AEYTLERGDFLSEEWRE-RIANTSVIFVNNFA---------F-GPEVDHQLKERFANMKEGGRIVSSKPFA 291 (438)
T ss_dssp CEEEEEECCTTSHHHHH-HHHTCSEEEECCTT---------C-CHHHHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred CCeEEEECcccCCcccc-ccCCccEEEEcccc---------c-CchHHHHHHHHHHcCCCCcEEEEeeccc
Confidence 68999998876653210 00258899988432 1 2566788899999999999998875543
No 149
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.58 E-value=9.7e-14 Score=118.65 Aligned_cols=109 Identities=19% Similarity=0.232 Sum_probs=87.4
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhc-cccccccceEEEecChhhhhhcC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKT-TSKAEKGLVKLFNMCHSRMEEIV 168 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~-~~~~~~~~v~~~~~~~~~l~~~~ 168 (267)
..+.++.+|||+|||+|.++..+++.+++ +.+|+++|+++++++.|++++... + ....+++++.++..+. .
T Consensus 95 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~~g--~~~~~v~~~~~d~~~~---~ 166 (280)
T 1i9g_A 95 GDIFPGARVLEAGAGSGALTLSLLRAVGP---AGQVISYEQRADHAEHARRNVSGCYG--QPPDNWRLVVSDLADS---E 166 (280)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCT---TSEEEEECSCHHHHHHHHHHHHHHHT--SCCTTEEEECSCGGGC---C
T ss_pred cCCCCCCEEEEEcccccHHHHHHHHHhCC---CCEEEEEeCCHHHHHHHHHHHHHhcC--CCCCcEEEEECchHhc---C
Confidence 35778999999999999999999997653 579999999999999999999875 2 0235788888766443 2
Q ss_pred CCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 169 PKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.++..||+|+++++ +..++++++.++|||||++++.+.
T Consensus 167 ~~~~~~D~v~~~~~--------------~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 167 LPDGSVDRAVLDML--------------APWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp CCTTCEEEEEEESS--------------CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCceeEEEECCc--------------CHHHHHHHHHHhCCCCCEEEEEeC
Confidence 23457999999842 223789999999999999998876
No 150
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.58 E-value=1.9e-14 Score=118.28 Aligned_cols=106 Identities=18% Similarity=0.118 Sum_probs=82.9
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++..++ ..+|+++|+++.+++.|++++...+ ..+++++.++.. .....
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~---~~~~~ 143 (215)
T 2yxe_A 74 DLKPGMKVLEIGTGCGYHAAVTAEIVGE---DGLVVSIERIPELAEKAERTLRKLG----YDNVIVIVGDGT---LGYEP 143 (215)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCT---TSEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEESCGG---GCCGG
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHhCC---CCEEEEEeCCHHHHHHHHHHHHHcC----CCCeEEEECCcc---cCCCC
Confidence 4678899999999999999999998743 4799999999999999999998766 457888876653 22222
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
...||+|+++... ++. .+++.++|||||++++.+..
T Consensus 144 ~~~fD~v~~~~~~---------~~~------~~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 144 LAPYDRIYTTAAG---------PKI------PEPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp GCCEEEEEESSBB---------SSC------CHHHHHTEEEEEEEEEEESS
T ss_pred CCCeeEEEECCch---------HHH------HHHHHHHcCCCcEEEEEECC
Confidence 3479999988422 111 14789999999999988763
No 151
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.58 E-value=8e-15 Score=124.45 Aligned_cols=108 Identities=15% Similarity=0.169 Sum_probs=79.4
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..++++ +.+|+|+|+|+.|++.|++++.... .+..+...+.. ... ..
T Consensus 42 ~l~~g~~VLDlGcGtG~~a~~La~~------g~~V~gvD~S~~ml~~Ar~~~~~~~-----v~~~~~~~~~~-~~~--~~ 107 (261)
T 3iv6_A 42 NIVPGSTVAVIGASTRFLIEKALER------GASVTVFDFSQRMCDDLAEALADRC-----VTIDLLDITAE-IPK--EL 107 (261)
T ss_dssp TCCTTCEEEEECTTCHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHTSSSC-----CEEEECCTTSC-CCG--GG
T ss_pred CCCCcCEEEEEeCcchHHHHHHHhc------CCEEEEEECCHHHHHHHHHHHHhcc-----ceeeeeecccc-ccc--cc
Confidence 5678899999999999999999987 4799999999999999999886531 12222211110 000 11
Q ss_pred CCcEEEEEEeCCCCCCCCCceee--chhhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 171 STAVRLVAFNLGYLPGGDKSVIT--TSETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
+.+||+|+++. +++ ..++...+++++.++| |||++++++..+
T Consensus 108 ~~~fD~Vv~~~---------~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 108 AGHFDFVLNDR---------LINRFTTEEARRACLGMLSLV-GSGTVRASVKLG 151 (261)
T ss_dssp TTCCSEEEEES---------CGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBS
T ss_pred CCCccEEEEhh---------hhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccC
Confidence 34799999983 333 2456678999999999 999999988754
No 152
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.57 E-value=4.7e-14 Score=128.55 Aligned_cols=140 Identities=14% Similarity=0.135 Sum_probs=103.4
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||+|||+|..+..+|+.++. .++|+++|+++.+++.+++|+++.+ ..++.+++.|..++....
T Consensus 102 ~~~~g~~VLDlcaGpGgkt~~lA~~~~~---~g~V~AvDis~~rl~~~~~n~~r~g----~~nv~v~~~Da~~l~~~~-- 172 (456)
T 3m4x_A 102 AAKPGEKVLDLCAAPGGKSTQLAAQMKG---KGLLVTNEIFPKRAKILSENIERWG----VSNAIVTNHAPAELVPHF-- 172 (456)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTT---CSEEEEECSSHHHHHHHHHHHHHHT----CSSEEEECCCHHHHHHHH--
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHcCC---CCEEEEEeCCHHHHHHHHHHHHHcC----CCceEEEeCCHHHhhhhc--
Confidence 3578999999999999999999998754 4799999999999999999999988 568999988887776433
Q ss_pred CCcEEEEEEeCCCCCCC----CCc---------eeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHH
Q 041272 171 STAVRLVAFNLGYLPGG----DKS---------VITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFA 237 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~----d~~---------~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 237 (267)
+..||.|++|+++-... +.. +........++++++.++|||||+|+.+++.-.+ .+....+..++
T Consensus 173 ~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~--eEne~vv~~~l 250 (456)
T 3m4x_A 173 SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP--EENEEIISWLV 250 (456)
T ss_dssp TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG--GGTHHHHHHHH
T ss_pred cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc--ccCHHHHHHHH
Confidence 24799999997642111 000 0011123458899999999999999887764332 33345566666
Q ss_pred HhCC
Q 041272 238 RSLS 241 (267)
Q Consensus 238 ~~l~ 241 (267)
+..+
T Consensus 251 ~~~~ 254 (456)
T 3m4x_A 251 ENYP 254 (456)
T ss_dssp HHSS
T ss_pred HhCC
Confidence 6543
No 153
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.57 E-value=1.7e-14 Score=122.34 Aligned_cols=106 Identities=17% Similarity=0.223 Sum_probs=82.8
Q ss_pred HHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh
Q 041272 87 VWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE 166 (267)
Q Consensus 87 l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 166 (267)
++...++++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++ .++.++.++..++.
T Consensus 43 ~l~~~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~- 106 (263)
T 3pfg_A 43 LVRRHSPKAASLLDVACGTGMHLRHLADS------FGTVEGLELSADMLAIARRRN---------PDAVLHHGDMRDFS- 106 (263)
T ss_dssp HHHHHCTTCCEEEEETCTTSHHHHHHTTT------SSEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTTCC-
T ss_pred HHHhhCCCCCcEEEeCCcCCHHHHHHHHc------CCeEEEEECCHHHHHHHHhhC---------CCCEEEECChHHCC-
Confidence 33344567789999999999999999987 368999999999999999864 35778876665432
Q ss_pred cCCCCCcEEEEEEeCCCCCCCCCceeec---hhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 167 IVPKSTAVRLVAFNLGYLPGGDKSVITT---SETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 167 ~~~~~~~~d~ii~~~~~lp~~d~~~~~~---~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
. +..||+|+++.. ++++ +.+...+++++.++|||||++++..
T Consensus 107 --~-~~~fD~v~~~~~--------~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 107 --L-GRRFSAVTCMFS--------SIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp --C-SCCEEEEEECTT--------GGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred --c-cCCcCEEEEcCc--------hhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 2 458999998731 2222 3567789999999999999999864
No 154
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.57 E-value=3e-14 Score=119.44 Aligned_cols=110 Identities=11% Similarity=0.138 Sum_probs=88.6
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC--
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP-- 169 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-- 169 (267)
..++.+|||+|||+|+.+..+++.++. +++|+++|+++++++.|+++++..+ ...+++++.++..+....+.
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~---~~~v~~iD~~~~~~~~a~~~~~~~g---~~~~i~~~~gda~~~l~~l~~~ 141 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPD---DGKITAIDFDREAYEIGLPFIRKAG---VEHKINFIESDAMLALDNLLQG 141 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCT---TCEEEEEESCHHHHHHHHHHHHHTT---CGGGEEEEESCHHHHHHHHHHS
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHHHHhc
Confidence 346779999999999999999998753 5899999999999999999998877 44679999988776533221
Q ss_pred --CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 170 --KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 170 --~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
+...||+|+.+.. ......+++++.++|||||++++..
T Consensus 142 ~~~~~~fD~I~~d~~------------~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 142 QESEGSYDFGFVDAD------------KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp TTCTTCEEEEEECSC------------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCCCCCcCEEEECCc------------hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 1347999998731 2456789999999999999998754
No 155
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.57 E-value=1.1e-13 Score=123.22 Aligned_cols=141 Identities=13% Similarity=0.049 Sum_probs=100.6
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
++++.+|||+|||+|.++..+++..+ +.+++++|+ +.+++.|++++...+ ...+++++.++..+ ..+.
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~----~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~---~~~~- 247 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAP----HLRGTLVEL-AGPAERARRRFADAG---LADRVTVAEGDFFK---PLPV- 247 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCT----TCEEEEEEC-HHHHHHHHHHHHHTT---CTTTEEEEECCTTS---CCSC-
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCC----CCEEEEEeC-HHHHHHHHHHHHhcC---CCCceEEEeCCCCC---cCCC-
Confidence 45778999999999999999999853 589999999 999999999998766 34589999876542 2222
Q ss_pred CcEEEEEEeCCCCCCCCCceeechh--hHHHHHHHHHhcccCCcEEEEEEe--cCCCCC-hhhH---------------H
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSE--TTKMALEAAERILIPGGLISMVVY--VGHPGG-REEL---------------E 231 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~--~~~~~~-~~~~---------------~ 231 (267)
.||+|++.. ++++.+ ...++++++.++|||||++++.+. ...... .... .
T Consensus 248 -~~D~v~~~~---------vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (374)
T 1qzz_A 248 -TADVVLLSF---------VLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVR 317 (374)
T ss_dssp -CEEEEEEES---------CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCC
T ss_pred -CCCEEEEec---------cccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCC
Confidence 499999873 444333 335899999999999999998876 321111 1000 0
Q ss_pred HHHHHHHhCCCCceEEEEEeeec
Q 041272 232 AVEAFARSLSVDDWICCKFQMLN 254 (267)
Q Consensus 232 ~~~~~~~~l~~~~~~~~~~~~~~ 254 (267)
...+|.+.+...+|++++.....
T Consensus 318 ~~~~~~~ll~~aGf~~~~~~~~~ 340 (374)
T 1qzz_A 318 TRDEVVDLAGSAGLALASERTSG 340 (374)
T ss_dssp CHHHHHHHHHTTTEEEEEEEEEC
T ss_pred CHHHHHHHHHHCCCceEEEEECC
Confidence 22345555667789888877654
No 156
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.57 E-value=8.2e-14 Score=128.02 Aligned_cols=137 Identities=12% Similarity=0.128 Sum_probs=100.2
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCc
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTA 173 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~ 173 (267)
++.+|||+|||+|..+..+|+.++. .++|+++|+|+.+++.+++|+++.+ ..++.++++|..++.... ...
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~---~g~V~avDis~~~l~~~~~n~~r~g----~~nv~~~~~D~~~~~~~~--~~~ 187 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNN---EGAILANEFSASRVKVLHANISRCG----ISNVALTHFDGRVFGAAV--PEM 187 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTT---CSEEEEECSSHHHHHHHHHHHHHHT----CCSEEEECCCSTTHHHHS--TTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEeCCHHHhhhhc--ccc
Confidence 8899999999999999999998753 4799999999999999999999887 468999988877665432 237
Q ss_pred EEEEEEeCCCCCC-----CCCceeec--------hhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhC
Q 041272 174 VRLVAFNLGYLPG-----GDKSVITT--------SETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSL 240 (267)
Q Consensus 174 ~d~ii~~~~~lp~-----~d~~~~~~--------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l 240 (267)
||.|++|+++... ......++ .....++++++.++|||||+++++++.-+.. +....+..+++..
T Consensus 188 fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~--Ene~vv~~~l~~~ 265 (479)
T 2frx_A 188 FDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQE--ENEAVCLWLKETY 265 (479)
T ss_dssp EEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSST--TTHHHHHHHHHHS
T ss_pred CCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcc--cCHHHHHHHHHHC
Confidence 9999999765211 10001111 1234688999999999999999887643332 2234455566554
Q ss_pred C
Q 041272 241 S 241 (267)
Q Consensus 241 ~ 241 (267)
+
T Consensus 266 ~ 266 (479)
T 2frx_A 266 P 266 (479)
T ss_dssp T
T ss_pred C
Confidence 3
No 157
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.56 E-value=2.4e-15 Score=125.80 Aligned_cols=148 Identities=18% Similarity=0.182 Sum_probs=88.1
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCc
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTA 173 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~ 173 (267)
.+.+|||||||+|.++..+++. + ..+|+|+|+|+.|++.|+++..+... ....++.++. ..++... .
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g----~~~V~gvDis~~ml~~a~~~~~~~~~-~~~~~~~~~~--~~~~~~~-----~ 103 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-G----AKLVYALDVGTNQLAWKIRSDERVVV-MEQFNFRNAV--LADFEQG-----R 103 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T----CSEEEEECSSCCCCCHHHHTCTTEEE-ECSCCGGGCC--GGGCCSC-----C
T ss_pred CCCEEEEEccCCCHHHHHHHhc-C----CCEEEEEcCCHHHHHHHHHhCccccc-cccceEEEeC--HhHcCcC-----C
Confidence 4679999999999999999987 3 25999999999999998876543210 0001111111 1122110 1
Q ss_pred EEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCCh-------------hhHHHHHHHHHhC
Q 041272 174 VRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGR-------------EELEAVEAFARSL 240 (267)
Q Consensus 174 ~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-------------~~~~~~~~~~~~l 240 (267)
+|.+.++..++.. ..+++++.++|||||++++...+....+. .......++.+.+
T Consensus 104 ~d~~~~D~v~~~l------------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l 171 (232)
T 3opn_A 104 PSFTSIDVSFISL------------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTA 171 (232)
T ss_dssp CSEEEECCSSSCG------------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEhhhH------------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHH
Confidence 3445555322111 47999999999999999987422111111 1112344555556
Q ss_pred CCCceEEEEEeeecC----CCCceEEEeec
Q 041272 241 SVDDWICCKFQMLNR----PLAPVLVFLFK 266 (267)
Q Consensus 241 ~~~~~~~~~~~~~~~----~~~p~~~~~~k 266 (267)
...+|.+....+..- ++..+++..+|
T Consensus 172 ~~aGf~v~~~~~~pi~g~~gn~e~l~~~~~ 201 (232)
T 3opn_A 172 TQLGFSVKGLTFSPIKGGAGNVEFLVHLLK 201 (232)
T ss_dssp HHHTEEEEEEEECSSCBTTTBCCEEEEEEE
T ss_pred HHCCCEEEEEEEccCCCCCCCHHHHHHHhh
Confidence 667888877655332 24556666554
No 158
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.56 E-value=1.9e-14 Score=119.26 Aligned_cols=110 Identities=20% Similarity=0.216 Sum_probs=83.9
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccc-cccceEEEecChhhhhhcCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKA-EKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~ 169 (267)
.++++.+|||+|||+|..+..+++..+. ..+|+|+|+++.+++.|++++...+... ...+++++.++.... ..
T Consensus 74 ~~~~~~~vLDiG~G~G~~~~~la~~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~ 147 (226)
T 1i1n_A 74 QLHEGAKALDVGSGSGILTACFARMVGC---TGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG---YA 147 (226)
T ss_dssp TSCTTCEEEEETCTTSHHHHHHHHHHCT---TCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC---CG
T ss_pred hCCCCCEEEEEcCCcCHHHHHHHHHhCC---CcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC---cc
Confidence 4678899999999999999999998753 4699999999999999999988754000 035788888765432 22
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
.+..||+|+++... ..+++++.++|||||++++....
T Consensus 148 ~~~~fD~i~~~~~~---------------~~~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 148 EEAPYDAIHVGAAA---------------PVVPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp GGCCEEEEEECSBB---------------SSCCHHHHHTEEEEEEEEEEESC
T ss_pred cCCCcCEEEECCch---------------HHHHHHHHHhcCCCcEEEEEEec
Confidence 23479999988422 13457889999999999987763
No 159
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.56 E-value=2e-14 Score=123.05 Aligned_cols=102 Identities=15% Similarity=0.161 Sum_probs=83.2
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++. .++.++.++..++. . +
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~---~-~ 115 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQS------GAEVLGTDNAATMIEKARQNY---------PHLHFDVADARNFR---V-D 115 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHC---------TTSCEEECCTTTCC---C-S
T ss_pred CCCCCEEEEecCCCCHHHHHHHhC------CCeEEEEECCHHHHHHHHhhC---------CCCEEEECChhhCC---c-C
Confidence 567889999999999999999983 479999999999999998864 35677776665432 2 3
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
..||+|+++ .++++.++...+++++.++|||||++++..+.
T Consensus 116 ~~fD~v~~~---------~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 116 KPLDAVFSN---------AMLHWVKEPEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp SCEEEEEEE---------SCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCcCEEEEc---------chhhhCcCHHHHHHHHHHhcCCCcEEEEEecC
Confidence 589999998 34555566789999999999999999987763
No 160
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.56 E-value=2.9e-14 Score=118.34 Aligned_cols=111 Identities=13% Similarity=0.209 Sum_probs=88.2
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh-cCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE-IVPK 170 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~-~~~~ 170 (267)
+.++.+|||+|||+|..+..+++.++. +.+|+++|+++.+++.|+++++..+ ...+++++.++..+... ....
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~---~~~v~~vD~~~~~~~~a~~~~~~~g---~~~~i~~~~~d~~~~~~~~~~~ 140 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPA---DGRVVTCEVDAQPPELGRPLWRQAE---AEHKIDLRLKPALETLDELLAA 140 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCT---TCEEEEEESCSHHHHHHHHHHHHTT---CTTTEEEEESCHHHHHHHHHHT
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHCC---CCCeEEEEEcCHHHHHHHHHhc
Confidence 456789999999999999999998653 5799999999999999999998876 34689999888765432 2111
Q ss_pred C--CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 171 S--TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 171 ~--~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
. ..||+|+++.. ......+++++.++|+|||++++...
T Consensus 141 ~~~~~~D~v~~d~~------------~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 141 GEAGTFDVAVVDAD------------KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp TCTTCEEEEEECSC------------STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCCCccEEEECCC------------HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 1 47999999842 23446899999999999999988543
No 161
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.56 E-value=1.2e-13 Score=115.83 Aligned_cols=105 Identities=18% Similarity=0.196 Sum_probs=84.7
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
..+.++.+|||+|||+|.++..+++. +.+|+++|+++++++.|+++....+ ...+++++..+..+ ...
T Consensus 87 ~~~~~~~~vldiG~G~G~~~~~l~~~------~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~---~~~ 154 (248)
T 2yvl_A 87 LNLNKEKRVLEFGTGSGALLAVLSEV------AGEVWTFEAVEEFYKTAQKNLKKFN---LGKNVKFFNVDFKD---AEV 154 (248)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHH------SSEEEEECSCHHHHHHHHHHHHHTT---CCTTEEEECSCTTT---SCC
T ss_pred cCCCCCCEEEEeCCCccHHHHHHHHh------CCEEEEEecCHHHHHHHHHHHHHcC---CCCcEEEEEcChhh---ccc
Confidence 34678899999999999999999998 2799999999999999999998766 33678888766543 221
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
++..||+|+.+++ +...+++++.++|||||++++...
T Consensus 155 ~~~~~D~v~~~~~--------------~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 155 PEGIFHAAFVDVR--------------EPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp CTTCBSEEEECSS--------------CGGGGHHHHHHHBCTTCEEEEEES
T ss_pred CCCcccEEEECCc--------------CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 3347999999743 224789999999999999998876
No 162
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.56 E-value=1.9e-14 Score=120.25 Aligned_cols=104 Identities=15% Similarity=0.207 Sum_probs=80.9
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++..+ .+|+++|+++.+++.|++++...+ ..+++++.++. ....+.
T Consensus 88 ~~~~~~~vLdiG~G~G~~~~~la~~~~-----~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~---~~~~~~ 155 (235)
T 1jg1_A 88 NLKPGMNILEVGTGSGWNAALISEIVK-----TDVYTIERIPELVEFAKRNLERAG----VKNVHVILGDG---SKGFPP 155 (235)
T ss_dssp TCCTTCCEEEECCTTSHHHHHHHHHHC-----SCEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCG---GGCCGG
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHhC-----CEEEEEeCCHHHHHHHHHHHHHcC----CCCcEEEECCc---ccCCCC
Confidence 467889999999999999999999852 689999999999999999998876 45688887665 122222
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
...||+|+++... + .+.+++.++|||||++++.+..
T Consensus 156 ~~~fD~Ii~~~~~---------~------~~~~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 156 KAPYDVIIVTAGA---------P------KIPEPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp GCCEEEEEECSBB---------S------SCCHHHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEECCcH---------H------HHHHHHHHhcCCCcEEEEEEec
Confidence 3359999988421 1 1224788999999999998764
No 163
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.56 E-value=4.8e-14 Score=117.70 Aligned_cols=109 Identities=24% Similarity=0.337 Sum_probs=84.1
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
..++++.+|||+|||+|.++..+++. .+|+|+|+|+.+++.|++++...+ .+++++..+..++. .
T Consensus 29 ~~~~~~~~vLdiG~G~G~~~~~l~~~-------~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~~---~ 93 (243)
T 3d2l_A 29 EQVEPGKRIADIGCGTGTATLLLADH-------YEVTGVDLSEEMLEIAQEKAMETN-----RHVDFWVQDMRELE---L 93 (243)
T ss_dssp HHSCTTCEEEEESCTTCHHHHHHTTT-------SEEEEEESCHHHHHHHHHHHHHTT-----CCCEEEECCGGGCC---C
T ss_pred HHcCCCCeEEEecCCCCHHHHHHhhC-------CeEEEEECCHHHHHHHHHhhhhcC-----CceEEEEcChhhcC---C
Confidence 35677899999999999999998876 489999999999999999987754 56888877664432 2
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
+ ..||+|+++...+. .....+...++++++.++|||||++++..
T Consensus 94 ~-~~fD~v~~~~~~~~-----~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 94 P-EPVDAITILCDSLN-----YLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp S-SCEEEEEECTTGGG-----GCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred C-CCcCEEEEeCCchh-----hcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 2 57999998631100 01123667899999999999999998854
No 164
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.55 E-value=7.4e-14 Score=121.34 Aligned_cols=118 Identities=14% Similarity=0.078 Sum_probs=84.3
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
+++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++..........+++++.+|..++.... .+.
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~-~~~ 168 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGT----VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQT-PDN 168 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTT----CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSS-CTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCC----CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhc-cCC
Confidence 5678999999999999999998642 47999999999999999998743210012468999988876554321 234
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.||+|+++... +..... .-...++++++.++|||||++++...
T Consensus 169 ~fDvIi~d~~~-~~~~~~----~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 169 TYDVVIIDTTD-PAGPAS----KLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp CEEEEEEECC--------------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ceeEEEECCCC-ccccch----hhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 79999998532 110000 00015899999999999999988754
No 165
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.55 E-value=1.4e-13 Score=124.86 Aligned_cols=124 Identities=12% Similarity=0.083 Sum_probs=90.8
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||+|||+|.+++.+|+. +.+|+|+|+|+++++.|++|++.++ .. ++++.++..++ ...
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~------~~~V~gvD~s~~ai~~A~~n~~~ng----l~-v~~~~~d~~~~---~~~- 352 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR------GFNVKGFDSNEFAIEMARRNVEINN----VD-AEFEVASDREV---SVK- 352 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHT----CC-EEEEECCTTTC---CCT-
T ss_pred cCCCCEEEEeeccchHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHHHcC----Cc-EEEEECChHHc---Ccc-
Confidence 677889999999999999999987 3699999999999999999999877 34 88998776554 222
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceEEEEEe
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWICCKFQ 251 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 251 (267)
.||+|++|++.-.. . ..+++.+. .|+|||++++++.+. .+..-+..+. |.+....
T Consensus 353 -~fD~Vv~dPPr~g~---~--------~~~~~~l~-~l~p~givyvsc~p~---------tlarDl~~l~---y~l~~~~ 407 (425)
T 2jjq_A 353 -GFDTVIVDPPRAGL---H--------PRLVKRLN-REKPGVIVYVSCNPE---------TFARDVKMLD---YRIDEIV 407 (425)
T ss_dssp -TCSEEEECCCTTCS---C--------HHHHHHHH-HHCCSEEEEEESCHH---------HHHHHHHHSS---CCEEEEE
T ss_pred -CCCEEEEcCCccch---H--------HHHHHHHH-hcCCCcEEEEECChH---------HHHhHHhhCe---EEEEEEE
Confidence 69999999653111 1 24555554 489999999987631 2222333443 7776666
Q ss_pred eecC
Q 041272 252 MLNR 255 (267)
Q Consensus 252 ~~~~ 255 (267)
.++.
T Consensus 408 ~~Dm 411 (425)
T 2jjq_A 408 ALDM 411 (425)
T ss_dssp EECC
T ss_pred EECc
Confidence 6655
No 166
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.55 E-value=9.9e-14 Score=126.85 Aligned_cols=141 Identities=19% Similarity=0.289 Sum_probs=100.5
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||+|||+|..+..+++.++. .++|+|+|+++.+++.++++++..+ ..+++++.+|..++.... +
T Consensus 256 ~~~~g~~VLDlgaG~G~~t~~la~~~~~---~~~v~a~D~s~~~l~~~~~~~~~~g----~~~v~~~~~D~~~~~~~~-~ 327 (450)
T 2yxl_A 256 DPKPGETVVDLAAAPGGKTTHLAELMKN---KGKIYAFDVDKMRMKRLKDFVKRMG----IKIVKPLVKDARKAPEII-G 327 (450)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTT---CSEEEEECSCHHHHHHHHHHHHHTT----CCSEEEECSCTTCCSSSS-C
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCC---CCEEEEEcCCHHHHHHHHHHHHHcC----CCcEEEEEcChhhcchhh-c
Confidence 4678899999999999999999998643 3799999999999999999999877 467899887765543222 2
Q ss_pred CCcEEEEEEeCCCCCCC-----CC--------ceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHH
Q 041272 171 STAVRLVAFNLGYLPGG-----DK--------SVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFA 237 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~-----d~--------~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 237 (267)
+..||.|++|+++-... .. .+........++++++.++|||||+++++++.-.+ .+....+..++
T Consensus 328 ~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~--~ene~~v~~~l 405 (450)
T 2yxl_A 328 EEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFK--EENEKNIRWFL 405 (450)
T ss_dssp SSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG--GGTHHHHHHHH
T ss_pred cCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCh--hhHHHHHHHHH
Confidence 24799999986552111 00 00001112367899999999999999988764332 23334566677
Q ss_pred HhCC
Q 041272 238 RSLS 241 (267)
Q Consensus 238 ~~l~ 241 (267)
+..+
T Consensus 406 ~~~~ 409 (450)
T 2yxl_A 406 NVHP 409 (450)
T ss_dssp HHCS
T ss_pred HhCC
Confidence 6643
No 167
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.55 E-value=6.1e-14 Score=120.52 Aligned_cols=159 Identities=15% Similarity=0.122 Sum_probs=97.1
Q ss_pred HHhhHHHhhhcC-CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEE-ec
Q 041272 82 IAANGVWKHVVR-KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLF-NM 159 (267)
Q Consensus 82 ~~~~~l~~~~l~-~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~-~~ 159 (267)
.+...+....+. ++.+|||+|||||.++..+++. + ..+|+|||+|+.|++.+.++- .++... ..
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~-g----a~~V~aVDvs~~mL~~a~r~~---------~rv~~~~~~ 137 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQN-G----AKLVYAVDVGTNQLVWKLRQD---------DRVRSMEQY 137 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-T----CSEEEEECSSSSCSCHHHHTC---------TTEEEECSC
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhC-C----CCEEEEEECCHHHHHHHHHhC---------cccceeccc
Confidence 333333333444 5779999999999999999987 2 369999999999999865432 122221 11
Q ss_pred ChhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCC--------h----
Q 041272 160 CHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGG--------R---- 227 (267)
Q Consensus 160 ~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~--------~---- 227 (267)
+...+.....+...||+++++..++. ...++.++.++|||||++++..-+....+ .
T Consensus 138 ni~~l~~~~l~~~~fD~v~~d~sf~s------------l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~ 205 (291)
T 3hp7_A 138 NFRYAEPVDFTEGLPSFASIDVSFIS------------LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRES 205 (291)
T ss_dssp CGGGCCGGGCTTCCCSEEEECCSSSC------------GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCH
T ss_pred CceecchhhCCCCCCCEEEEEeeHhh------------HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCH
Confidence 12222111111224899998854321 14799999999999999998743322111 1
Q ss_pred -hhHHHHHHHHHhCCCCceEEEEEeeecC----CCCceEEEeec
Q 041272 228 -EELEAVEAFARSLSVDDWICCKFQMLNR----PLAPVLVFLFK 266 (267)
Q Consensus 228 -~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~p~~~~~~k 266 (267)
......+++...+...+|.+....+..- ++..|++.+.|
T Consensus 206 ~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~g~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 206 SIHEKVLETVTAFAVDYGFSVKGLDFSPIQGGHGNIEFLAHLEK 249 (291)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEEEEEECSSCCGGGCCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCcCHHHHHHhhh
Confidence 1123344455555566788766555332 37778877654
No 168
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.55 E-value=3.5e-14 Score=116.28 Aligned_cols=109 Identities=16% Similarity=0.186 Sum_probs=83.6
Q ss_pred hHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhh
Q 041272 85 NGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRM 164 (267)
Q Consensus 85 ~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l 164 (267)
..++...+.++.+|||+|||+|.++..+ + ..+|+|+|+|+.+++.|+++. .++.++.++..++
T Consensus 27 ~~~l~~~~~~~~~vLdiG~G~G~~~~~l----~----~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~ 89 (211)
T 2gs9_A 27 ERALKGLLPPGESLLEVGAGTGYWLRRL----P----YPQKVGVEPSEAMLAVGRRRA---------PEATWVRAWGEAL 89 (211)
T ss_dssp HHHHHTTCCCCSEEEEETCTTCHHHHHC----C----CSEEEEECCCHHHHHHHHHHC---------TTSEEECCCTTSC
T ss_pred HHHHHHhcCCCCeEEEECCCCCHhHHhC----C----CCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcccccC
Confidence 3444445568889999999999998877 2 138999999999999999865 3567777665443
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
..++.+||+|+++. ++++.++..++++++.++|||||.+++.++..
T Consensus 90 ---~~~~~~fD~v~~~~---------~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 90 ---PFPGESFDVVLLFT---------TLEFVEDVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp ---CSCSSCEEEEEEES---------CTTTCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred ---CCCCCcEEEEEEcC---------hhhhcCCHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 33455899999883 44444567899999999999999999988743
No 169
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.54 E-value=2.3e-14 Score=118.82 Aligned_cols=116 Identities=15% Similarity=0.178 Sum_probs=84.7
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcC-CCCCCcEEEEEeCChHHHHHHHHHHhhccccc-cccceEEEecChhhhhh-c
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVA-DESSAGCVYGLDIQSEALKSTSSLLDKTTSKA-EKGLVKLFNMCHSRMEE-I 167 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~-~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~-~~~~v~~~~~~~~~l~~-~ 167 (267)
.++++.+|||+|||+|.++..+++..+ ..+|..+|+|+|+++++++.|++++...+... ...+++++.++..+... .
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 467889999999999999999999864 00014699999999999999999998754000 03578888877654210 0
Q ss_pred CCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 168 VPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 168 ~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
.....+||+|+.+... + .+++++.++|||||++++....
T Consensus 157 ~~~~~~fD~I~~~~~~---------~------~~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 157 KKELGLFDAIHVGASA---------S------ELPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHHCCEEEEEECSBB---------S------SCCHHHHHHEEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCch---------H------HHHHHHHHhcCCCcEEEEEEcc
Confidence 0123479999988422 1 2457889999999999998774
No 170
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.54 E-value=1.5e-13 Score=121.11 Aligned_cols=105 Identities=20% Similarity=0.182 Sum_probs=86.6
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
..+.++.+|||+|||+|.+++. |+. +.+|+|+|+|+.+++.|++|++.++ ...+++++++|..++.
T Consensus 191 ~~~~~~~~VLDlg~G~G~~~l~-a~~------~~~V~~vD~s~~ai~~a~~n~~~n~---l~~~v~~~~~D~~~~~---- 256 (336)
T 2yx1_A 191 KKVSLNDVVVDMFAGVGPFSIA-CKN------AKKIYAIDINPHAIELLKKNIKLNK---LEHKIIPILSDVREVD---- 256 (336)
T ss_dssp HHCCTTCEEEETTCTTSHHHHH-TTT------SSEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCGGGCC----
T ss_pred HhcCCCCEEEEccCccCHHHHh-ccC------CCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEECChHHhc----
Confidence 3456889999999999999999 873 4799999999999999999999987 3468999987775543
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCC
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGH 223 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 223 (267)
..||+|++|+++.. .++++.+.++|+|||++++.++...
T Consensus 257 --~~fD~Vi~dpP~~~-------------~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 257 --VKGNRVIMNLPKFA-------------HKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp --CCEEEEEECCTTTG-------------GGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred --CCCcEEEECCcHhH-------------HHHHHHHHHHcCCCCEEEEEEeecC
Confidence 47999999964321 2788999999999999998877544
No 171
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.54 E-value=5.7e-14 Score=122.70 Aligned_cols=106 Identities=17% Similarity=0.219 Sum_probs=83.2
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||+|||+|.++..+++..+. .++|+|+|+|+++++.|+++++..+ ..+++++.++..+. .+.
T Consensus 72 ~~~~~~~VLDiGcG~G~~~~~la~~~~~---~~~v~gvD~s~~~~~~a~~~~~~~g----~~~v~~~~~d~~~~---~~~ 141 (317)
T 1dl5_A 72 GLDKGMRVLEIGGGTGYNAAVMSRVVGE---KGLVVSVEYSRKICEIAKRNVERLG----IENVIFVCGDGYYG---VPE 141 (317)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCT---TCEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCGGGC---CGG
T ss_pred CCCCcCEEEEecCCchHHHHHHHHhcCC---CCEEEEEECCHHHHHHHHHHHHHcC----CCCeEEEECChhhc---ccc
Confidence 5678999999999999999999998642 3679999999999999999998877 45688888776543 222
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
+.+||+|+++... ++.. +++.++|||||++++.+.+
T Consensus 142 ~~~fD~Iv~~~~~---------~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 142 FSPYDVIFVTVGV---------DEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp GCCEEEEEECSBB---------SCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred CCCeEEEEEcCCH---------HHHH------HHHHHhcCCCcEEEEEECC
Confidence 3479999998422 1111 5778899999999997653
No 172
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.54 E-value=4.7e-14 Score=124.14 Aligned_cols=112 Identities=21% Similarity=0.232 Sum_probs=83.4
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcc----cc---ccccceEEEecChhh
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTT----SK---AEKGLVKLFNMCHSR 163 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~----~~---~~~~~v~~~~~~~~~ 163 (267)
.+.++.+|||+|||+|.++..+++.+++ ..+|+|+|+++.+++.|++++...+ .+ ....+++++.++..+
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~ 178 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGS---QGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISG 178 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCT---TCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTC
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCC---CceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHH
Confidence 5778999999999999999999998653 5899999999999999999987521 00 012578998877654
Q ss_pred hhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 164 MEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 164 l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
....+ ++..||+|+++++. +..+++++.++|||||++++...
T Consensus 179 ~~~~~-~~~~fD~V~~~~~~--------------~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 179 ATEDI-KSLTFDAVALDMLN--------------PHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp CC--------EEEEEECSSS--------------TTTTHHHHGGGEEEEEEEEEEES
T ss_pred ccccc-CCCCeeEEEECCCC--------------HHHHHHHHHHhcCCCcEEEEEeC
Confidence 42111 23469999998421 12478999999999999987665
No 173
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.54 E-value=1.5e-15 Score=127.27 Aligned_cols=104 Identities=15% Similarity=0.119 Sum_probs=82.2
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++.++ ...+++++++|..++. .+.
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~------~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~----~~~ 143 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALT------GMRVIAIDIDPVKIALARNNAEVYG---IADKIEFICGDFLLLA----SFL 143 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTT---CGGGEEEEESCHHHHG----GGC
T ss_pred cCCCEEEECccccCHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHHHcC---CCcCeEEEECChHHhc----ccC
Confidence 37889999999999999999987 4799999999999999999999877 3368999998877664 234
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEE
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMV 218 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 218 (267)
.||+|++++++... ......+.++.++|+|||++++.
T Consensus 144 ~~D~v~~~~~~~~~---------~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 144 KADVVFLSPPWGGP---------DYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp CCSEEEECCCCSSG---------GGGGSSSBCTTTSCSSCHHHHHH
T ss_pred CCCEEEECCCcCCc---------chhhhHHHHHHhhcCCcceeHHH
Confidence 79999999654222 22223566788889999986543
No 174
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.54 E-value=1.2e-14 Score=120.76 Aligned_cols=103 Identities=13% Similarity=0.128 Sum_probs=80.2
Q ss_pred HHhhHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecCh
Q 041272 82 IAANGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCH 161 (267)
Q Consensus 82 ~~~~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~ 161 (267)
.....++...++++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++ ..++++++++.
T Consensus 36 ~l~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~---------~~~~~~~~~d~ 100 (226)
T 3m33_A 36 LTFDLWLSRLLTPQTRVLEAGCGHGPDAARFGPQ------AARWAAYDFSPELLKLARAN---------APHADVYEWNG 100 (226)
T ss_dssp HHHHHHHHHHCCTTCEEEEESCTTSHHHHHHGGG------SSEEEEEESCHHHHHHHHHH---------CTTSEEEECCS
T ss_pred HHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHh---------CCCceEEEcch
Confidence 3444455445678899999999999999999987 37999999999999999987 14678887665
Q ss_pred hhhhhcCCC-CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEE
Q 041272 162 SRMEEIVPK-STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLIS 216 (267)
Q Consensus 162 ~~l~~~~~~-~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 216 (267)
.+. ...+ +.+||+|+++. +...+++++.++|||||+++
T Consensus 101 ~~~--~~~~~~~~fD~v~~~~---------------~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 101 KGE--LPAGLGAPFGLIVSRR---------------GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp CSS--CCTTCCCCEEEEEEES---------------CCSGGGGGHHHHEEEEEEEE
T ss_pred hhc--cCCcCCCCEEEEEeCC---------------CHHHHHHHHHHHcCCCcEEE
Confidence 321 2222 45899999982 12378899999999999998
No 175
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.54 E-value=3.2e-14 Score=128.67 Aligned_cols=114 Identities=15% Similarity=0.050 Sum_probs=84.3
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHH-------HHHHhhcccccc-ccceEEEecCh
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKST-------SSLLDKTTSKAE-KGLVKLFNMCH 161 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a-------~~~~~~~~~~~~-~~~v~~~~~~~ 161 (267)
..+.++.+|||||||+|.++..+|+..+. .+|+|||+++.+++.| ++++...+ . ..++++++++.
T Consensus 238 l~l~~g~~VLDLGCGsG~la~~LA~~~g~----~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G---l~~~nV~~i~gD~ 310 (433)
T 1u2z_A 238 CQLKKGDTFMDLGSGVGNCVVQAALECGC----ALSFGCEIMDDASDLTILQYEELKKRCKLYG---MRLNNVEFSLKKS 310 (433)
T ss_dssp TTCCTTCEEEEESCTTSHHHHHHHHHHCC----SEEEEEECCHHHHHHHHHHHHHHHHHHHHTT---BCCCCEEEEESSC
T ss_pred cCCCCCCEEEEeCCCcCHHHHHHHHHCCC----CEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC---CCCCceEEEEcCc
Confidence 35678999999999999999999998653 6899999999999999 88887765 2 26888887532
Q ss_pred h-hhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 162 S-RMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 162 ~-~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
. +...+......||+|+++.. . ..++..++++++.+.|||||++++...
T Consensus 311 ~~~~~~~~~~~~~FDvIvvn~~---------l-~~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 311 FVDNNRVAELIPQCDVILVNNF---------L-FDEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp STTCHHHHHHGGGCSEEEECCT---------T-CCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred cccccccccccCCCCEEEEeCc---------c-ccccHHHHHHHHHHhCCCCeEEEEeec
Confidence 2 10001001236899998621 1 124556789999999999999988754
No 176
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.54 E-value=3.4e-13 Score=119.19 Aligned_cols=112 Identities=16% Similarity=0.179 Sum_probs=88.9
Q ss_pred cCC-CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 92 VRK-GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 92 l~~-~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
+.+ +.+|||+|||+|.++..+++..+ +.+++++|+ +.+++.|++++...+ ...+++++.++..+.....+
T Consensus 176 ~~~~~~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~- 246 (352)
T 3mcz_A 176 VFARARTVIDLAGGHGTYLAQVLRRHP----QLTGQIWDL-PTTRDAARKTIHAHD---LGGRVEFFEKNLLDARNFEG- 246 (352)
T ss_dssp GGTTCCEEEEETCTTCHHHHHHHHHCT----TCEEEEEEC-GGGHHHHHHHHHHTT---CGGGEEEEECCTTCGGGGTT-
T ss_pred CcCCCCEEEEeCCCcCHHHHHHHHhCC----CCeEEEEEC-HHHHHHHHHHHHhcC---CCCceEEEeCCcccCcccCC-
Confidence 345 78999999999999999999854 589999999 889999999998766 45679999877654432222
Q ss_pred CCcEEEEEEeCCCCCCCCCceeech--hhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTS--ETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
..||+|++. .++|+. +...++++++.+.|||||++++.+...
T Consensus 247 -~~~D~v~~~---------~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (352)
T 3mcz_A 247 -GAADVVMLN---------DCLHYFDAREAREVIGHAAGLVKPGGALLILTMTM 290 (352)
T ss_dssp -CCEEEEEEE---------SCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred -CCccEEEEe---------cccccCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 359999987 344433 345899999999999999999987643
No 177
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.53 E-value=4.2e-14 Score=125.21 Aligned_cols=108 Identities=18% Similarity=0.182 Sum_probs=85.1
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||+|||+|.++..+++. + ..+|+|+|+|+ +++.|+++++.++ ...+++++.++..++ ..++
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-g----~~~v~gvD~s~-~l~~a~~~~~~~~---~~~~v~~~~~d~~~~---~~~~ 131 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-G----ARKVIGIECSS-ISDYAVKIVKANK---LDHVVTIIKGKVEEV---ELPV 131 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-T----CSEEEEEECST-HHHHHHHHHHHTT---CTTTEEEEESCTTTC---CCSS
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-C----CCEEEEECcHH-HHHHHHHHHHHcC---CCCcEEEEECcHHHc---cCCC
Confidence 457899999999999999999987 3 36999999995 9999999999887 455699998777555 2334
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEE
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISM 217 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 217 (267)
.+||+|+++... ...........+++++.++|||||+++.
T Consensus 132 ~~fD~Iis~~~~------~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 132 EKVDIIISEWMG------YCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp SCEEEEEECCCB------BTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred CceEEEEEcccc------ccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 589999997411 1122334567899999999999999864
No 178
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.53 E-value=3.8e-14 Score=121.81 Aligned_cols=112 Identities=14% Similarity=0.192 Sum_probs=81.1
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeC-ChHHHHHHHHHHh-----hccccccc----cceEEEecCh
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDI-QSEALKSTSSLLD-----KTTSKAEK----GLVKLFNMCH 161 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~-s~~~i~~a~~~~~-----~~~~~~~~----~~v~~~~~~~ 161 (267)
+.++.+|||+|||+|.+++.+++. + ..+|+|+|+ |+.+++.|++|+. .++ .. .+++++..+.
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~-~----~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~---~~~~~~~~v~~~~~~~ 148 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLA-G----ADQVVATDYPDPEILNSLESNIREHTANSCS---SETVKRASPKVVPYRW 148 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHT-T----CSEEEEEECSCHHHHHHHHHHHHTTCC-------------CCCEEEECCT
T ss_pred hcCCCeEEEecccccHHHHHHHHc-C----CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcc---cccCCCCCeEEEEecC
Confidence 357889999999999999999886 2 259999999 8999999999994 333 11 3677775443
Q ss_pred hhh-hhcCC--CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhccc---C--CcEEEEEEe
Q 041272 162 SRM-EEIVP--KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILI---P--GGLISMVVY 220 (267)
Q Consensus 162 ~~l-~~~~~--~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~Lk---p--gG~l~i~~~ 220 (267)
.+. ..... .+..||+|++. .+.++.+....+++.+.++|| | ||+++++..
T Consensus 149 ~~~~~~~~~~~~~~~fD~Ii~~---------dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 149 GDSPDSLQRCTGLQRFQVVLLA---------DLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp TSCTHHHHHHHSCSSBSEEEEE---------SCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred CCccHHHHhhccCCCCCEEEEe---------CcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEE
Confidence 331 11110 23479999875 245556777899999999999 9 999877654
No 179
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.53 E-value=3.5e-13 Score=118.08 Aligned_cols=109 Identities=11% Similarity=0.087 Sum_probs=87.3
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|..+..+++..+ +.+++++|++ .+++.|++++...+ ...+++++.++..+. ..++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~D~~-~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~---~~~~- 231 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNP----NAEIFGVDWA-SVLEVAKENARIQG---VASRYHTIAGSAFEV---DYGN- 231 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCT----TCEEEEEECH-HHHHHHHHHHHHHT---CGGGEEEEESCTTTS---CCCS-
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC----CCeEEEEecH-HHHHHHHHHHHhcC---CCcceEEEecccccC---CCCC-
Confidence 6778999999999999999999863 5899999999 99999999998766 345799998765433 1222
Q ss_pred cEEEEEEeCCCCCCCCCceeech--hhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTS--ETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
.||+|++. .+.++. +...++++++.++|||||++++.+...
T Consensus 232 ~~D~v~~~---------~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 232 DYDLVLLP---------NFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp CEEEEEEE---------SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CCcEEEEc---------chhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 49999987 244433 456799999999999999999987644
No 180
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.53 E-value=1.4e-14 Score=127.87 Aligned_cols=111 Identities=17% Similarity=0.215 Sum_probs=85.2
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|.++..+++..+ ..+|+|+|+|+.+++.|++++..++ ..++++.++..+ .. +.
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~----~~~v~~vD~s~~~l~~a~~~~~~~~-----~~~~~~~~d~~~---~~--~~ 260 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSP----KIRLTLCDVSAPAVEASRATLAANG-----VEGEVFASNVFS---EV--KG 260 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCT----TCBCEEEESBHHHHHHHHHHHHHTT-----CCCEEEECSTTT---TC--CS
T ss_pred CCCCeEEEecCccCHHHHHHHHHCC----CCEEEEEECCHHHHHHHHHHHHHhC-----CCCEEEEccccc---cc--cC
Confidence 4567999999999999999998843 4799999999999999999998866 235566554432 22 34
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
.||+|+++.++... .........++++++.++|||||.++++...
T Consensus 261 ~fD~Iv~~~~~~~g----~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 261 RFDMIISNPPFHDG----MQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp CEEEEEECCCCCSS----SHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred CeeEEEECCCcccC----ccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 79999999643111 1113456689999999999999999998763
No 181
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.53 E-value=6.2e-14 Score=123.70 Aligned_cols=106 Identities=20% Similarity=0.282 Sum_probs=84.5
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||+|||+|.++..+++. + ..+|+|+|+|+ |++.|+++++.++ ...+++++.++..++ ..++
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g----~~~v~gvD~s~-~~~~a~~~~~~~~---~~~~i~~~~~d~~~~---~~~~ 129 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-G----AKKVLGVDQSE-ILYQAMDIIRLNK---LEDTITLIKGKIEEV---HLPV 129 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T----CSEEEEEESST-HHHHHHHHHHHTT---CTTTEEEEESCTTTS---CCSC
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-C----CCEEEEEChHH-HHHHHHHHHHHcC---CCCcEEEEEeeHHHh---cCCC
Confidence 567889999999999999999987 2 36999999997 9999999998877 347899998776544 2334
Q ss_pred CcEEEEEEeC-CCCCCCCCceeechhhHHHHHHHHHhcccCCcEEE
Q 041272 172 TAVRLVAFNL-GYLPGGDKSVITTSETTKMALEAAERILIPGGLIS 216 (267)
Q Consensus 172 ~~~d~ii~~~-~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 216 (267)
.+||+|+++. ++ ..........+++++.++|||||+++
T Consensus 130 ~~~D~Ivs~~~~~-------~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 130 EKVDVIISEWMGY-------FLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCEEEEEECCCBT-------TBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CcEEEEEEcCchh-------hccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 5799999984 22 12233456789999999999999997
No 182
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.53 E-value=2.8e-14 Score=121.09 Aligned_cols=101 Identities=16% Similarity=0.191 Sum_probs=82.3
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++. +++++.++..++ ..++
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~d~~~~---~~~~ 92 (261)
T 3ege_A 32 LPKGSVIADIGAGTGGYSVALANQ------GLFVYAVEPSIVMRQQAVVHP----------QVEWFTGYAENL---ALPD 92 (261)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHTT------TCEEEEECSCHHHHHSSCCCT----------TEEEECCCTTSC---CSCT
T ss_pred CCCCCEEEEEcCcccHHHHHHHhC------CCEEEEEeCCHHHHHHHHhcc----------CCEEEECchhhC---CCCC
Confidence 467899999999999999999974 579999999999999887632 688888766443 3344
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
.+||+|++. .++++.++...+++++.++|| ||++++.++.
T Consensus 93 ~~fD~v~~~---------~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 93 KSVDGVISI---------LAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp TCBSEEEEE---------SCGGGCSSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred CCEeEEEEc---------chHhhccCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 689999998 345555777899999999999 9988888764
No 183
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.53 E-value=1.1e-14 Score=123.02 Aligned_cols=87 Identities=6% Similarity=0.093 Sum_probs=68.1
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh-hhhcCCC--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR-MEEIVPK-- 170 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~~-- 170 (267)
++.+|||+|||+|.++..+++..+ +.+|+|+|+|+.|++.|+++++.++ ...++++++++..+ +.+.+..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~----~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~ 137 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN----GWYFLATEVDDMCFNYAKKNVEQNN---LSDLIKVVKVPQKTLLMDALKEES 137 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH----CCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTCSSTTTSTTCC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC----CCeEEEEECCHHHHHHHHHHHHHcC---CCccEEEEEcchhhhhhhhhhccc
Confidence 577999999999999999998753 3799999999999999999998877 34569999887655 3333322
Q ss_pred CCcEEEEEEeCCCCCCC
Q 041272 171 STAVRLVAFNLGYLPGG 187 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~ 187 (267)
+..||+|++|++|....
T Consensus 138 ~~~fD~i~~npp~~~~~ 154 (254)
T 2h00_A 138 EIIYDFCMCNPPFFANQ 154 (254)
T ss_dssp SCCBSEEEECCCCC---
T ss_pred CCcccEEEECCCCccCc
Confidence 24799999999886543
No 184
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.53 E-value=2e-13 Score=119.76 Aligned_cols=140 Identities=12% Similarity=0.072 Sum_probs=101.6
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.+..+|||+|||+|..+..+++..+ +.+++++|+ +.+++.|++++...+ ...+++++.++.. +..+.
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~---~~~p~-- 234 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHE----DLSGTVLDL-QGPASAAHRRFLDTG---LSGRAQVVVGSFF---DPLPA-- 234 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCT----TCEEEEEEC-HHHHHHHHHHHHHTT---CTTTEEEEECCTT---SCCCC--
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCC----CCeEEEecC-HHHHHHHHHhhhhcC---cCcCeEEecCCCC---CCCCC--
Confidence 3567999999999999999999854 589999999 999999999998766 3578999986653 22222
Q ss_pred cEEEEEEeCCCCCCCCCceeechhh--HHHHHHHHHhcccCCcEEEEEEecCCCCCh---hhH----------HHHHHHH
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSET--TKMALEAAERILIPGGLISMVVYVGHPGGR---EEL----------EAVEAFA 237 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~---~~~----------~~~~~~~ 237 (267)
.||+|++. .++|+.++ ..++++++++.|||||++++.+........ .+. ....+|.
T Consensus 235 ~~D~v~~~---------~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~ 305 (332)
T 3i53_A 235 GAGGYVLS---------AVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELG 305 (332)
T ss_dssp SCSEEEEE---------SCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHH
T ss_pred CCcEEEEe---------hhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHH
Confidence 68999887 34443333 589999999999999999998764332110 000 0123455
Q ss_pred HhCCCCceEEEEEeeec
Q 041272 238 RSLSVDDWICCKFQMLN 254 (267)
Q Consensus 238 ~~l~~~~~~~~~~~~~~ 254 (267)
+.+...+|+.++.....
T Consensus 306 ~ll~~aGf~~~~~~~~~ 322 (332)
T 3i53_A 306 ELAAQAGLAVRAAHPIS 322 (332)
T ss_dssp HHHHHTTEEEEEEEECS
T ss_pred HHHHHCCCEEEEEEECC
Confidence 55666789988876653
No 185
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.53 E-value=2.7e-13 Score=123.26 Aligned_cols=139 Identities=14% Similarity=0.141 Sum_probs=99.0
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
..+++.+|||+|||+|..+..+++..+ +++|+|+|+++.+++.++++++..+ .+++++.+|..++.....
T Consensus 243 ~~~~g~~VLDlgaG~G~~t~~la~~~~----~~~v~a~D~~~~~l~~~~~~~~~~g-----~~~~~~~~D~~~~~~~~~- 312 (429)
T 1sqg_A 243 APQNGEHILDLCAAPGGKTTHILEVAP----EAQVVAVDIDEQRLSRVYDNLKRLG-----MKATVKQGDGRYPSQWCG- 312 (429)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHCT----TCEEEEEESSTTTHHHHHHHHHHTT-----CCCEEEECCTTCTHHHHT-
T ss_pred CCCCcCeEEEECCCchHHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHHcC-----CCeEEEeCchhhchhhcc-
Confidence 356889999999999999999999864 3799999999999999999999877 247788877765543222
Q ss_pred CCcEEEEEEeCCCCCCCC----Cce---------eechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHH
Q 041272 171 STAVRLVAFNLGYLPGGD----KSV---------ITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFA 237 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d----~~~---------~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 237 (267)
+..||.|++|+++....- ... ........++++++.++|||||+++++++.-.+ .+....+..++
T Consensus 313 ~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~--~ene~~v~~~l 390 (429)
T 1sqg_A 313 EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP--EENSLQIKAFL 390 (429)
T ss_dssp TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCG--GGTHHHHHHHH
T ss_pred cCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCh--hhHHHHHHHHH
Confidence 247999999976522110 000 001122368899999999999999988763322 23334566677
Q ss_pred HhCC
Q 041272 238 RSLS 241 (267)
Q Consensus 238 ~~l~ 241 (267)
+..+
T Consensus 391 ~~~~ 394 (429)
T 1sqg_A 391 QRTA 394 (429)
T ss_dssp HHCT
T ss_pred HhCC
Confidence 6543
No 186
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.52 E-value=5.6e-14 Score=119.05 Aligned_cols=110 Identities=20% Similarity=0.150 Sum_probs=82.6
Q ss_pred hHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhh
Q 041272 85 NGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRM 164 (267)
Q Consensus 85 ~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l 164 (267)
..++...++++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++... + ++.++..++
T Consensus 45 ~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~l~~a~~~~~~--------~--~~~~d~~~~ 108 (260)
T 2avn_A 45 GSFLEEYLKNPCRVLDLGGGTGKWSLFLQER------GFEVVLVDPSKEMLEVAREKGVK--------N--VVEAKAEDL 108 (260)
T ss_dssp HHHHHHHCCSCCEEEEETCTTCHHHHHHHTT------TCEEEEEESCHHHHHHHHHHTCS--------C--EEECCTTSC
T ss_pred HHHHHHhcCCCCeEEEeCCCcCHHHHHHHHc------CCeEEEEeCCHHHHHHHHhhcCC--------C--EEECcHHHC
Confidence 3344444557889999999999999999987 36899999999999999987531 2 455444333
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
..++..||+|++.. .+.+..++...+++++.++|||||++++..+.
T Consensus 109 ---~~~~~~fD~v~~~~--------~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 109 ---PFPSGAFEAVLALG--------DVLSYVENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp ---CSCTTCEEEEEECS--------SHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ---CCCCCCEEEEEEcc--------hhhhccccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 23355899999862 12333345789999999999999999988763
No 187
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.52 E-value=1.4e-13 Score=122.09 Aligned_cols=108 Identities=13% Similarity=0.091 Sum_probs=85.9
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||+|||+|.++..+++.. |+.+++++|+ +.+++.|+++++..+ ...+++++.++..+. ..++
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~----p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~---~~~~ 256 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHF----PELDSTILNL-PGAIDLVNENAAEKG---VADRMRGIAVDIYKE---SYPE 256 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHC----TTCEEEEEEC-GGGHHHHHHHHHHTT---CTTTEEEEECCTTTS---CCCC
T ss_pred CCCCCEEEEECCcccHHHHHHHHHC----CCCeEEEEec-HHHHHHHHHHHHhcC---CCCCEEEEeCccccC---CCCC
Confidence 4677899999999999999999985 3589999999 999999999998766 345699998766443 2222
Q ss_pred CcEEEEEEeCCCCCCCCCceeech--hhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTS--ETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
.|+|++. .++++. +...++++++.++|||||++++.+..
T Consensus 257 --~D~v~~~---------~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 257 --ADAVLFC---------RILYSANEQLSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp --CSEEEEE---------SCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred --CCEEEEe---------chhccCCHHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 3888887 244433 33789999999999999999988754
No 188
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.52 E-value=1.6e-13 Score=122.06 Aligned_cols=112 Identities=9% Similarity=0.008 Sum_probs=86.9
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.+..+|||||||+|..+..+++.. |+.+++++|+ +.+++.|++++...+ ...+++++.+|..+....++ .
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~----p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~p--~ 247 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN----KEVEVTIVDL-PQQLEMMRKQTAGLS---GSERIHGHGANLLDRDVPFP--T 247 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS----TTCEEEEEEC-HHHHHHHHHHHTTCT---TGGGEEEEECCCCSSSCCCC--C
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC----CCCEEEEEeC-HHHHHHHHHHHHhcC---cccceEEEEccccccCCCCC--C
Confidence 456799999999999999999985 4589999999 999999999998766 34689999876543210112 3
Q ss_pred cEEEEEEeCCCCCCCCCceeec--hhhHHHHHHHHHhcccCCcEEEEEEecCC
Q 041272 173 AVRLVAFNLGYLPGGDKSVITT--SETTKMALEAAERILIPGGLISMVVYVGH 223 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~--~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 223 (267)
.||+|++. .++|+ .+...++++++.+.|||||++++.+....
T Consensus 248 ~~D~v~~~---------~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 248 GFDAVWMS---------QFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp CCSEEEEE---------SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred CcCEEEEe---------chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 68999887 24442 34456899999999999999999876443
No 189
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.52 E-value=1.9e-13 Score=118.08 Aligned_cols=117 Identities=15% Similarity=0.103 Sum_probs=82.7
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccc-ccccceEEEecChhhhhhcCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSK-AEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~-~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
++..+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+.. ....+++++.+|..+.... .+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~ 155 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKN----VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ--TS 155 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTT----CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C--CC
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCC----CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh--cC
Confidence 4567999999999999999998743 479999999999999999998764200 0135889988776544322 24
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
..||+|++|+.. |.... ..-...++++++.++|||||++++...
T Consensus 156 ~~fDvIi~D~~~-p~~~~----~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 156 QTFDVIISDCTD-PIGPG----ESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp CCEEEEEECC---------------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCccEEEECCCC-ccCcc----hhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 579999998532 11000 000116899999999999999988764
No 190
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.52 E-value=1.2e-13 Score=124.99 Aligned_cols=105 Identities=10% Similarity=0.097 Sum_probs=79.1
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
++++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++-.. .....+..+ +......++
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~------g~~v~gvD~s~~~~~~a~~~~~~------~~~~~~~~~---~~~~l~~~~ 169 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEA------GVRHLGFEPSSGVAAKAREKGIR------VRTDFFEKA---TADDVRRTE 169 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHT------TCEEEEECCCHHHHHHHHTTTCC------EECSCCSHH---HHHHHHHHH
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc------CCcEEEECCCHHHHHHHHHcCCC------cceeeechh---hHhhcccCC
Confidence 467889999999999999999986 46999999999999999886111 011112222 222222223
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+||+|+++ .++++.+++..+++++.++|||||++++...
T Consensus 170 ~~fD~I~~~---------~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 170 GPANVIYAA---------NTLCHIPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp CCEEEEEEE---------SCGGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEEEEEEC---------ChHHhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 579999998 4666667889999999999999999999765
No 191
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.51 E-value=4.9e-14 Score=117.04 Aligned_cols=112 Identities=14% Similarity=0.228 Sum_probs=82.0
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCC--CCCCcEEEEEeCChHHHHHHHHHHhhcccc-ccccceEEEecChhhhhhc
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVAD--ESSAGCVYGLDIQSEALKSTSSLLDKTTSK-AEKGLVKLFNMCHSRMEEI 167 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~--~~p~~~v~giD~s~~~i~~a~~~~~~~~~~-~~~~~v~~~~~~~~~l~~~ 167 (267)
.++++.+|||+|||+|.++..+++..+. ..+..+|+++|+++++++.|++++...+.. ....+++++.++..+ .
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~---~ 157 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK---G 157 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG---C
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc---C
Confidence 4678899999999999999999987531 000148999999999999999998764300 003578888876644 2
Q ss_pred CCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 168 VPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 168 ~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+....||+|+.+... + .+++++.++|||||++++...
T Consensus 158 ~~~~~~fD~I~~~~~~---------~------~~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 158 YPPNAPYNAIHVGAAA---------P------DTPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp CGGGCSEEEEEECSCB---------S------SCCHHHHHTEEEEEEEEEEES
T ss_pred CCcCCCccEEEECCch---------H------HHHHHHHHHhcCCCEEEEEEe
Confidence 2223479999988422 1 233788999999999998876
No 192
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.51 E-value=1.1e-13 Score=115.28 Aligned_cols=108 Identities=18% Similarity=0.246 Sum_probs=82.8
Q ss_pred HHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh
Q 041272 87 VWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE 166 (267)
Q Consensus 87 l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 166 (267)
++...+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|+++. .+++++.++..++.
T Consensus 33 ~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~~- 96 (239)
T 3bxo_A 33 LVRSRTPEASSLLDVACGTGTHLEHFTKEF------GDTAGLELSEDMLTHARKRL---------PDATLHQGDMRDFR- 96 (239)
T ss_dssp HHHHHCTTCCEEEEETCTTSHHHHHHHHHH------SEEEEEESCHHHHHHHHHHC---------TTCEEEECCTTTCC-
T ss_pred HHHHhcCCCCeEEEecccCCHHHHHHHHhC------CcEEEEeCCHHHHHHHHHhC---------CCCEEEECCHHHcc-
Confidence 333345678899999999999999999883 48999999999999998864 35777776664432
Q ss_pred cCCCCCcEEEEEEeCCCCCCCCCceee---chhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 167 IVPKSTAVRLVAFNLGYLPGGDKSVIT---TSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 167 ~~~~~~~~d~ii~~~~~lp~~d~~~~~---~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
. +..||+|++... +++ .+++..++++++.++|||||++++..+.
T Consensus 97 --~-~~~~D~v~~~~~--------~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 97 --L-GRKFSAVVSMFS--------SVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp --C-SSCEEEEEECTT--------GGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred --c-CCCCcEEEEcCc--------hHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 2 457999996421 222 2366789999999999999999987653
No 193
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.51 E-value=2.8e-13 Score=116.01 Aligned_cols=109 Identities=16% Similarity=0.120 Sum_probs=83.7
Q ss_pred CCCEEEEecCCC---ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhh-----
Q 041272 94 KGDTVVDATCGN---GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRME----- 165 (267)
Q Consensus 94 ~~~~VLDlGcG~---G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~----- 165 (267)
+..+|||||||+ |.++..+++.. |+.+|+++|+|+.|++.|++++.. ..+++++++|..+..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~----p~~~v~~vD~sp~~l~~Ar~~~~~------~~~v~~~~~D~~~~~~~~~~ 146 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVN----PDARVVYVDIDPMVLTHGRALLAK------DPNTAVFTADVRDPEYILNH 146 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHC----TTCEEEEEESSHHHHHHHHHHHTT------CTTEEEEECCTTCHHHHHHS
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhC----CCCEEEEEECChHHHHHHHHhcCC------CCCeEEEEeeCCCchhhhcc
Confidence 347999999999 98887766653 358999999999999999998854 357899998876542
Q ss_pred ----hcCCCCCcEEEEEEeCCCCCCCCCceeechh--hHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 166 ----EIVPKSTAVRLVAFNLGYLPGGDKSVITTSE--TTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 166 ----~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
..+.. ..+|+++++. ++|+.+ ....+++++.++|||||+|++.....
T Consensus 147 ~~~~~~~d~-~~~d~v~~~~---------vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 147 PDVRRMIDF-SRPAAIMLVG---------MLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHHHCCT-TSCCEEEETT---------TGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred chhhccCCC-CCCEEEEEec---------hhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 11221 2688888873 344322 36799999999999999999998754
No 194
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.51 E-value=1e-12 Score=117.14 Aligned_cols=139 Identities=13% Similarity=0.065 Sum_probs=103.3
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||+|||+|.++..+++.. |+.+++++|+ +.+++.|++++...+ ...+++++.++.. +..+.
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~----p~~~~~~~D~-~~~~~~a~~~~~~~~---l~~~v~~~~~d~~---~~~p~- 267 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAF----PGLRGTLLER-PPVAEEARELLTGRG---LADRCEILPGDFF---ETIPD- 267 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHC----TTCEEEEEEC-HHHHHHHHHHHHHTT---CTTTEEEEECCTT---TCCCS-
T ss_pred CccCcEEEEeCCCccHHHHHHHHHC----CCCeEEEEcC-HHHHHHHHHhhhhcC---cCCceEEeccCCC---CCCCC-
Confidence 4567899999999999999999985 4589999999 999999999998766 4578999987654 22222
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhh--HHHHHHHHHhcccCCcEEEEEEecCCCCChhh-----H----------HHHH
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSET--TKMALEAAERILIPGGLISMVVYVGHPGGREE-----L----------EAVE 234 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-----~----------~~~~ 234 (267)
.||+|++. .+++..++ ..++++++.+.|||||++++.+.......... . ....
T Consensus 268 -~~D~v~~~---------~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~ 337 (369)
T 3gwz_A 268 -GADVYLIK---------HVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSES 337 (369)
T ss_dssp -SCSEEEEE---------SCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHH
T ss_pred -CceEEEhh---------hhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHH
Confidence 68999887 34443333 35899999999999999999886543322111 0 0134
Q ss_pred HHHHhCCCCceEEEEEee
Q 041272 235 AFARSLSVDDWICCKFQM 252 (267)
Q Consensus 235 ~~~~~l~~~~~~~~~~~~ 252 (267)
+|.+.+...+|++++...
T Consensus 338 e~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 338 EFAALLEKSGLRVERSLP 355 (369)
T ss_dssp HHHHHHHTTTEEEEEEEE
T ss_pred HHHHHHHHCCCeEEEEEE
Confidence 566667778999888765
No 195
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.51 E-value=3.6e-13 Score=117.09 Aligned_cols=141 Identities=15% Similarity=0.158 Sum_probs=98.2
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+++|++|||+|||+|..+..+|+.++. .++|+++|+++.+++.+++|+++.+ ..+++++.+|..++......
T Consensus 99 ~~~~g~~VLDlcaG~G~kt~~la~~~~~---~g~V~a~D~~~~~l~~~~~n~~r~g----~~~v~~~~~D~~~~~~~~~~ 171 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGNKTSHLAALLKN---QGKIFAFDLDAKRLASMATLLARAG----VSCCELAEEDFLAVSPSDPR 171 (309)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCGGGSCTTCGG
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHhCC---CCEEEEEeCCHHHHHHHHHHHHHcC----CCeEEEEeCChHhcCccccc
Confidence 4678999999999999999999998753 5799999999999999999999987 46899998877655332111
Q ss_pred CCcEEEEEEeCCCCCCC------CCc---------eeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHH
Q 041272 171 STAVRLVAFNLGYLPGG------DKS---------VITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEA 235 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~------d~~---------~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~ 235 (267)
...||.|+.|+++-... |.. +........++|+.+.++|+ ||+++.+++.-+ ..+....+..
T Consensus 172 ~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~--~~Ene~~v~~ 248 (309)
T 2b9e_A 172 YHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLC--QEENEDVVRD 248 (309)
T ss_dssp GTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCC--GGGTHHHHHH
T ss_pred cCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCC--hHHhHHHHHH
Confidence 13699999997662211 100 00011233578888988887 998877665322 2233445666
Q ss_pred HHHhCC
Q 041272 236 FARSLS 241 (267)
Q Consensus 236 ~~~~l~ 241 (267)
+++..+
T Consensus 249 ~l~~~~ 254 (309)
T 2b9e_A 249 ALQQNP 254 (309)
T ss_dssp HHTTST
T ss_pred HHHhCC
Confidence 666543
No 196
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.50 E-value=1.5e-13 Score=131.84 Aligned_cols=119 Identities=13% Similarity=0.075 Sum_probs=94.1
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccc-cceEEEecChhhhhhcCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEK-GLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~ 171 (267)
.+|.+|||+|||+|.+++.++.. + ..+|+++|+|+.+++.|++|++.++ .. .+++++++|..++.... .
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~-g----a~~V~aVD~s~~al~~a~~N~~~ng---l~~~~v~~i~~D~~~~l~~~--~ 607 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLG-G----ARSTTTVDMSRTYLEWAERNLRLNG---LTGRAHRLIQADCLAWLREA--N 607 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHT-T----CSEEEEEESCHHHHHHHHHHHHHTT---CCSTTEEEEESCHHHHHHHC--C
T ss_pred cCCCcEEEeeechhHHHHHHHHC-C----CCEEEEEeCCHHHHHHHHHHHHHcC---CCccceEEEecCHHHHHHhc--C
Confidence 46889999999999999999974 2 3579999999999999999999988 33 48999998887754433 3
Q ss_pred CcEEEEEEeCCCCCCCCCc--eeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 172 TAVRLVAFNLGYLPGGDKS--VITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~--~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
..||+|++|+++....... .......+.++++.+.++|||||++++++..
T Consensus 608 ~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 608 EQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 4799999998875543321 2334567789999999999999999987764
No 197
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.50 E-value=8.3e-14 Score=124.50 Aligned_cols=108 Identities=18% Similarity=0.261 Sum_probs=85.1
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||+|||+|.++..+++. + ..+|+|+|+| .|++.|+++++.++ ...+++++.++..++. .+
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~-g----~~~V~gvD~s-~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~---~~- 127 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQA-G----ARKVYAVEAT-KMADHARALVKANN---LDHIVEVIEGSVEDIS---LP- 127 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHT-T----CSEEEEEESS-TTHHHHHHHHHHTT---CTTTEEEEESCGGGCC---CS-
T ss_pred cCCCCEEEEeccCcCHHHHHHHhc-C----CCEEEEEccH-HHHHHHHHHHHHcC---CCCeEEEEECchhhcC---cC-
Confidence 467889999999999999999987 2 2599999999 99999999999887 4567999987775543 22
Q ss_pred CcEEEEEEeC-CCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 172 TAVRLVAFNL-GYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 172 ~~~d~ii~~~-~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.+||+|+++. ++.. ........+++++.++|||||++++..
T Consensus 128 ~~~D~Iv~~~~~~~l-------~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 128 EKVDVIISEWMGYFL-------LRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp SCEEEEEECCCBTTB-------TTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred CcceEEEEcChhhcc-------cchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 5799999974 2211 112345689999999999999997643
No 198
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.49 E-value=6.2e-13 Score=116.86 Aligned_cols=117 Identities=14% Similarity=0.101 Sum_probs=85.9
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhc--cccccccceEEEecChhhhhhcCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKT--TSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
...+.+|||||||+|.++..++++.+ ..+|+++|+|+.+++.|++++... + ....+++++.+|..+......
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~----~~~V~~VDis~~~l~~Ar~~~~~~~~g--l~~~rv~~~~~D~~~~l~~~~ 191 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHAS----IEQIDMCEIDKMVVDVSKQFFPDVAIG--YEDPRVNLVIGDGVAFLKNAA 191 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTT----CCEEEEEESCHHHHHHHHHHCHHHHGG--GGSTTEEEEESCHHHHHHTSC
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCC----CCEEEEEECCHHHHHHHHHHHHhhccc--cCCCcEEEEECCHHHHHHhcc
Confidence 35668999999999999999998743 479999999999999999998753 2 013689999888765433222
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+..||+|+++... |.. . .......++++++.++|||||++++...
T Consensus 192 -~~~fDlIi~d~~~-p~~--~--~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 236 (334)
T 1xj5_A 192 -EGSYDAVIVDSSD-PIG--P--AKELFEKPFFQSVARALRPGGVVCTQAE 236 (334)
T ss_dssp -TTCEEEEEECCCC-TTS--G--GGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred -CCCccEEEECCCC-ccC--c--chhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 3479999998531 110 0 0001136899999999999999988643
No 199
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.48 E-value=3.3e-13 Score=112.01 Aligned_cols=101 Identities=21% Similarity=0.207 Sum_probs=79.1
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++. ..+|+|+|+++.+++.|++++...+ +++++.++..+ ..+.
T Consensus 67 ~~~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~~~~~~~~a~~~~~~~~------~v~~~~~d~~~---~~~~ 131 (231)
T 1vbf_A 67 DLHKGQKVLEIGTGIGYYTALIAEI------VDKVVSVEINEKMYNYASKLLSYYN------NIKLILGDGTL---GYEE 131 (231)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH------SSEEEEEESCHHHHHHHHHHHTTCS------SEEEEESCGGG---CCGG
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHH------cCEEEEEeCCHHHHHHHHHHHhhcC------CeEEEECCccc---cccc
Confidence 4678899999999999999999987 3689999999999999999887632 78888876654 1222
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
+.+||+|+++.. .++ +.+++.++|||||++++....
T Consensus 132 ~~~fD~v~~~~~---------~~~------~~~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 132 EKPYDRVVVWAT---------APT------LLCKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp GCCEEEEEESSB---------BSS------CCHHHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEECCc---------HHH------HHHHHHHHcCCCcEEEEEEcC
Confidence 357999998842 221 124688999999999988763
No 200
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.48 E-value=8.6e-13 Score=116.93 Aligned_cols=142 Identities=14% Similarity=0.124 Sum_probs=101.2
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||+|||+|.++..+++..+ +.+++++|+ +.+++.|++++...+ ...+++++.++..+ ..+.
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~----~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~---~~~~- 248 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAP----HVSATVLEM-AGTVDTARSYLKDEG---LSDRVDVVEGDFFE---PLPR- 248 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCT----TCEEEEEEC-TTHHHHHHHHHHHTT---CTTTEEEEECCTTS---CCSS-
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCC----CCEEEEecC-HHHHHHHHHHHHhcC---CCCceEEEeCCCCC---CCCC-
Confidence 45678999999999999999999853 589999999 999999999998866 34589999876532 2222
Q ss_pred CcEEEEEEeCCCCCCCCCceeechh--hHHHHHHHHHhcccCCcEEEEEEec-CC-CCChhhHH---------------H
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSE--TTKMALEAAERILIPGGLISMVVYV-GH-PGGREELE---------------A 232 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~-~~-~~~~~~~~---------------~ 232 (267)
.||++++.. ++++.+ ...++++++.++|||||++++.+.. .. ........ .
T Consensus 249 -~~D~v~~~~---------vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 318 (360)
T 1tw3_A 249 -KADAIILSF---------VLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRT 318 (360)
T ss_dssp -CEEEEEEES---------CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCB
T ss_pred -CccEEEEcc---------cccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCC
Confidence 499998872 443332 3368999999999999999998764 11 11111000 1
Q ss_pred HHHHHHhCCCCceEEEEEeeecC
Q 041272 233 VEAFARSLSVDDWICCKFQMLNR 255 (267)
Q Consensus 233 ~~~~~~~l~~~~~~~~~~~~~~~ 255 (267)
...|.+.+...+|.++.......
T Consensus 319 ~~e~~~ll~~aGf~~~~~~~~~~ 341 (360)
T 1tw3_A 319 REKWDGLAASAGLVVEEVRQLPS 341 (360)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHHHHHHHCCCeEEEEEeCCC
Confidence 23444555567898887766643
No 201
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.48 E-value=6.4e-13 Score=114.97 Aligned_cols=117 Identities=12% Similarity=0.080 Sum_probs=83.7
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
..+.+|||+|||+|..+..++++.+ ..+|+++|+++.+++.|++++...+......+++++.+|..+..... ..
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~--~~ 162 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDS----VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF--KN 162 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTT----CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC--SS
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCC----CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC--CC
Confidence 4568999999999999999998743 47999999999999999999864210001368999988876543322 34
Q ss_pred cEEEEEEeCCCCC-CCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 173 AVRLVAFNLGYLP-GGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 173 ~~d~ii~~~~~lp-~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.||+|++++.. | ... ...-...++++++.++|||||++++...
T Consensus 163 ~fD~Ii~d~~~-~~~~~----~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 163 EFDVIIIDSTD-PTAGQ----GGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp CEEEEEEEC---------------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred CceEEEEcCCC-cccCc----hhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 79999998532 1 000 0000226899999999999999988654
No 202
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.48 E-value=1e-12 Score=115.26 Aligned_cols=139 Identities=15% Similarity=0.114 Sum_probs=99.5
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.+ .+|||+|||+|..+..+++..+ +.+++++|+ +.+++.|++++...+ ...+++++.++..+ ..+
T Consensus 166 ~~~-~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~---~~~-- 231 (334)
T 2ip2_A 166 FRG-RSFVDVGGGSGELTKAILQAEP----SARGVMLDR-EGSLGVARDNLSSLL---AGERVSLVGGDMLQ---EVP-- 231 (334)
T ss_dssp CTT-CEEEEETCTTCHHHHHHHHHCT----TCEEEEEEC-TTCTHHHHHHTHHHH---HTTSEEEEESCTTT---CCC--
T ss_pred CCC-CEEEEeCCCchHHHHHHHHHCC----CCEEEEeCc-HHHHHHHHHHHhhcC---CCCcEEEecCCCCC---CCC--
Confidence 345 8999999999999999999853 589999999 999999999987765 34689999876543 222
Q ss_pred CcEEEEEEeCCCCCCCCCceeec--hhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHH----------------HH
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITT--SETTKMALEAAERILIPGGLISMVVYVGHPGGREELE----------------AV 233 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~--~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~----------------~~ 233 (267)
..||+|++. .++|+ .+...++++++.+.|||||++++.+............ ..
T Consensus 232 ~~~D~v~~~---------~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 302 (334)
T 2ip2_A 232 SNGDIYLLS---------RIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTT 302 (334)
T ss_dssp SSCSEEEEE---------SCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBH
T ss_pred CCCCEEEEc---------hhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCH
Confidence 368999887 34442 2344699999999999999999987643221111000 12
Q ss_pred HHHHHhCCCCceEEEEEeee
Q 041272 234 EAFARSLSVDDWICCKFQML 253 (267)
Q Consensus 234 ~~~~~~l~~~~~~~~~~~~~ 253 (267)
.+|.+.+...+|+..+....
T Consensus 303 ~e~~~ll~~aGf~~~~~~~~ 322 (334)
T 2ip2_A 303 EEVVDLLGRGGFAVERIVDL 322 (334)
T ss_dssp HHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHCCCceeEEEEC
Confidence 34444555678888776654
No 203
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.47 E-value=3.4e-13 Score=117.11 Aligned_cols=112 Identities=13% Similarity=0.006 Sum_probs=85.2
Q ss_pred CEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCcEE
Q 041272 96 DTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTAVR 175 (267)
Q Consensus 96 ~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~d 175 (267)
.+|||||||+|.++..+++..+ +.+|++||+++.+++.|++++.... ..+++++.+|..++.... .+..||
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p----~~~v~~VEidp~vi~~Ar~~~~~~~----~~rv~v~~~Da~~~l~~~-~~~~fD 161 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP----QSRNTVVELDAELARLSREWFDIPR----APRVKIRVDDARMVAESF-TPASRD 161 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST----TCEEEEEESCHHHHHHHHHHSCCCC----TTTEEEEESCHHHHHHTC-CTTCEE
T ss_pred CEEEEEECCcCHHHHHHHHHCC----CcEEEEEECCHHHHHHHHHhccccC----CCceEEEECcHHHHHhhc-cCCCCC
Confidence 3999999999999999999753 5799999999999999999986533 468999998877654332 234799
Q ss_pred EEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 176 LVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 176 ~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
+|+++........ ..-...++++++.++|||||++++....
T Consensus 162 vIi~D~~~~~~~~-----~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 162 VIIRDVFAGAITP-----QNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp EEEECCSTTSCCC-----GGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEECCCCccccc-----hhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 9999852211100 0011268999999999999999887763
No 204
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.47 E-value=2.4e-12 Score=114.87 Aligned_cols=139 Identities=13% Similarity=0.127 Sum_probs=96.4
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
..++.+|||+|||+|.+++.++.... .++|+|+|+|+.|++.|++|++.++ ...+++++++|..++.. ++
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~----~~~v~g~Dis~~~l~~A~~n~~~~g---l~~~i~~~~~D~~~~~~---~~ 284 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRY----SGEIIGIEKYRKHLIGAEMNALAAG---VLDKIKFIQGDATQLSQ---YV 284 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTC----CSCEEEEESCHHHHHHHHHHHHHTT---CGGGCEEEECCGGGGGG---TC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCC----CCeEEEEeCCHHHHHHHHHHHHHcC---CCCceEEEECChhhCCc---cc
Confidence 67889999999999999999998742 2489999999999999999999887 34689999988766542 23
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceEEEEEe
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWICCKFQ 251 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 251 (267)
..||+|++|++|-.... ........+.++++++.++| ||.++++.. ....+.+.+.. .+|.+.+..
T Consensus 285 ~~fD~Ii~npPyg~r~~-~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~--------~~~~~~~~~~~---~G~~~~~~~ 350 (373)
T 3tm4_A 285 DSVDFAISNLPYGLKIG-KKSMIPDLYMKFFNELAKVL--EKRGVFITT--------EKKAIEEAIAE---NGFEIIHHR 350 (373)
T ss_dssp SCEEEEEEECCCC-------CCHHHHHHHHHHHHHHHE--EEEEEEEES--------CHHHHHHHHHH---TTEEEEEEE
T ss_pred CCcCEEEECCCCCcccC-cchhHHHHHHHHHHHHHHHc--CCeEEEEEC--------CHHHHHHHHHH---cCCEEEEEE
Confidence 57999999987622110 00112233478889999988 566655554 12333444443 356665544
Q ss_pred eec
Q 041272 252 MLN 254 (267)
Q Consensus 252 ~~~ 254 (267)
.+.
T Consensus 351 ~~~ 353 (373)
T 3tm4_A 351 VIG 353 (373)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 205
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.46 E-value=1.4e-12 Score=111.91 Aligned_cols=113 Identities=13% Similarity=0.068 Sum_probs=83.9
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccc-------cccceEEEecChhhh
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKA-------EKGLVKLFNMCHSRM 164 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~-------~~~~v~~~~~~~~~l 164 (267)
...+.+|||||||+|..+..++++ + ..+|+++|+++.+++.|++++ ...... ...+++++.+|..+.
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~-~----~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~ 146 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQH-D----VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEF 146 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTS-C----CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHH
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhC-C----CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHH
Confidence 356689999999999999999987 4 379999999999999999998 431000 136899998887654
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhh--HHHHHHHHHhcccCCcEEEEEEe
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSET--TKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
... +..||+|+++... |... ... ..++++++.++|||||++++...
T Consensus 147 l~~---~~~fD~Ii~d~~~-~~~~------~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 147 IKN---NRGFDVIIADSTD-PVGP------AKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp HHH---CCCEEEEEEECCC-CC-----------TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcc---cCCeeEEEECCCC-CCCc------chhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 332 3479999999643 1110 111 26899999999999999988754
No 206
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.46 E-value=3.1e-13 Score=118.59 Aligned_cols=108 Identities=19% Similarity=0.247 Sum_probs=83.4
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||+|||+|.++..+++. + ..+|+|+|+| .+++.|+++++.++ ...+++++.++..++. .+.
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~-g----~~~v~~vD~s-~~~~~a~~~~~~~~---~~~~i~~~~~d~~~~~---~~~ 103 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH-G----AKHVIGVDMS-SIIEMAKELVELNG---FSDKITLLRGKLEDVH---LPF 103 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-C----CSEEEEEESS-THHHHHHHHHHHTT---CTTTEEEEESCTTTSC---CSS
T ss_pred hcCCCEEEEecCccHHHHHHHHHC-C----CCEEEEEChH-HHHHHHHHHHHHcC---CCCCEEEEECchhhcc---CCC
Confidence 457889999999999999999986 2 3699999999 59999999998877 4567999987765542 233
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEE
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISM 217 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 217 (267)
.+||+|+++... ...........++.++.++|||||+++.
T Consensus 104 ~~~D~Ivs~~~~------~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 104 PKVDIIISEWMG------YFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp SCEEEEEECCCB------TTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred CcccEEEEeCch------hhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 579999998421 0112233456889999999999999973
No 207
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.46 E-value=4.1e-13 Score=110.74 Aligned_cols=102 Identities=17% Similarity=0.176 Sum_probs=79.0
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|..+..+++. + .+|+|+|+|+.+++.++++.. .++..+..+.. ...++.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-----~~~~~~D~~~~~~~~~~~~~~-----------~~~~~d~~~~~-~~~~~~ 92 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-----TRVSGIEAFPEAAEQAKEKLD-----------HVVLGDIETMD-MPYEEE 92 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-----CEEEEEESSHHHHHHHHTTSS-----------EEEESCTTTCC-CCSCTT
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-----CeEEEEeCCHHHHHHHHHhCC-----------cEEEcchhhcC-CCCCCC
Confidence 57889999999999999999987 2 699999999999999987532 34554443321 112345
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
.||+|+++ .+.++.++...+++++.++|||||++++....
T Consensus 93 ~fD~v~~~---------~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 93 QFDCVIFG---------DVLEHLFDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp CEEEEEEE---------SCGGGSSCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred ccCEEEEC---------ChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 79999988 34555556679999999999999999998753
No 208
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.46 E-value=1.3e-12 Score=113.95 Aligned_cols=121 Identities=17% Similarity=0.091 Sum_probs=86.2
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccc-ccccceEEEecChhhhhhcCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSK-AEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~-~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.+.+|||||||+|..+..++++.+ ..+|+++|+++.+++.|++++...+.. ....+++++.+|..+.....
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-- 148 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPT----VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT-- 148 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTT----CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC--
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCC----CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc--
Confidence 34568999999999999999998743 479999999999999999988642100 01368999998877643322
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+..||+|+++... +..... ....-...++++++.++|||||++++...
T Consensus 149 ~~~fD~Ii~d~~~-~~~~~~-~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 149 EERYDVVIIDLTD-PVGEDN-PARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp CCCEEEEEEECCC-CBSTTC-GGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCccEEEECCCC-cccccC-cchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 3479999999532 110000 00000136899999999999999998754
No 209
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.45 E-value=2.9e-13 Score=120.42 Aligned_cols=106 Identities=17% Similarity=0.189 Sum_probs=81.2
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.+|++|||||||+|.+++.+|+. | ..+|+|||.|+ +++.|+++++.++ +..+|+++.++.+++. . ..
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~a-G----A~~V~ave~s~-~~~~a~~~~~~n~---~~~~i~~i~~~~~~~~---l-pe 148 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQA-G----ARRVYAVEASA-IWQQAREVVRFNG---LEDRVHVLPGPVETVE---L-PE 148 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-T----CSEEEEEECST-THHHHHHHHHHTT---CTTTEEEEESCTTTCC---C-SS
T ss_pred cCCCEEEEeCCCccHHHHHHHHh-C----CCEEEEEeChH-HHHHHHHHHHHcC---CCceEEEEeeeeeeec---C-Cc
Confidence 46889999999999999888875 3 36899999996 8999999999988 5678999998776552 1 24
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEE
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISM 217 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 217 (267)
++|+|++.+.- ..+........++....++|||||+++-
T Consensus 149 ~~DvivsE~~~------~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 149 QVDAIVSEWMG------YGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CEEEEECCCCB------TTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccEEEeeccc------ccccccchhhhHHHHHHhhCCCCceECC
Confidence 79999986310 1122223346778888899999999863
No 210
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.45 E-value=1.5e-12 Score=111.92 Aligned_cols=116 Identities=16% Similarity=0.148 Sum_probs=86.0
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
.+++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+......+++++.+|..+..... .
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~--~ 149 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKS----VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV--T 149 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTT----CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC--C
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCC----CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC--C
Confidence 34668999999999999999997642 47999999999999999999865421111368999988876643322 3
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhh--HHHHHHHHHhcccCCcEEEEEEe
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSET--TKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
..||+|+++... |.. .... ..++++++.++|||||++++...
T Consensus 150 ~~fD~Ii~d~~~-~~~------~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 150 NTYDVIIVDSSD-PIG------PAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp SCEEEEEEECCC-TTT------GGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCceEEEEcCCC-CCC------cchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 479999998532 110 0111 16899999999999999988754
No 211
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.45 E-value=4.5e-13 Score=113.81 Aligned_cols=97 Identities=22% Similarity=0.322 Sum_probs=77.4
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|.++..+++..+ +.+|+|+|+|+.+++.|+++. .++.++.++..++ ...+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~----~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~---~~~~~ 147 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP----EITTFGLDVSKVAIKAAAKRY---------PQVTFCVASSHRL---PFSDT 147 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT----TSEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTSC---SBCTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC----CCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcchhhC---CCCCC
Confidence 5788999999999999999999853 479999999999999998853 3567777665443 22345
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
+||+|++... ...++++.++|||||+++++.+.
T Consensus 148 ~fD~v~~~~~----------------~~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 148 SMDAIIRIYA----------------PCKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp CEEEEEEESC----------------CCCHHHHHHHEEEEEEEEEEEEC
T ss_pred ceeEEEEeCC----------------hhhHHHHHHhcCCCcEEEEEEcC
Confidence 8999998732 13589999999999999998764
No 212
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.45 E-value=1.5e-12 Score=113.81 Aligned_cols=116 Identities=15% Similarity=0.128 Sum_probs=85.3
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||||||+|.++..++++.+ ..+|+++|+|+.+++.|++++..........+++++.+|..+..... +.
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~--~~ 188 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKS----VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV--TN 188 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTT----CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC--CS
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCC----CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc--CC
Confidence 4568999999999999999998643 47999999999999999999876210001368999988876543322 34
Q ss_pred cEEEEEEeCCCCCCCCCceeechhh-HHHHHHHHHhcccCCcEEEEEEe
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSET-TKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~-~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.||+|+++... |.. ..... ..++++++.++|||||++++...
T Consensus 189 ~fDvIi~d~~~-p~~-----~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 189 TYDVIIVDSSD-PIG-----PAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp CEEEEEEECCC-SSS-----GGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CceEEEECCcC-CCC-----cchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 79999999531 110 00111 16899999999999999988654
No 213
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.45 E-value=8.5e-13 Score=113.04 Aligned_cols=117 Identities=14% Similarity=0.056 Sum_probs=85.1
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
..+.+|||||||+|..+..++++.+ ..+|++||+++.+++.|++++...+......+++++.+|..+..... +.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~ 147 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPS----VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS--EN 147 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTT----CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC--CS
T ss_pred CCCCEEEEECCchHHHHHHHHhCCC----CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC--CC
Confidence 3567999999999999999998743 47999999999999999999854210001368999988876543322 34
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.||+|++++.. |..... .-...++++++.++|||||++++...
T Consensus 148 ~fD~Ii~d~~~-~~~~~~----~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 148 QYDVIMVDSTE-PVGPAV----NLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp CEEEEEESCSS-CCSCCC----CCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred CeeEEEECCCC-CCCcch----hhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 79999999643 211000 00125799999999999999988654
No 214
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.45 E-value=5.1e-13 Score=118.16 Aligned_cols=108 Identities=14% Similarity=0.171 Sum_probs=82.7
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||||||+|.++..+++. + ..+|+|+|+|+ +++.|+++++.++ ...+++++.++..++. .+
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~-g----~~~V~~vD~s~-~~~~a~~~~~~~~---l~~~v~~~~~d~~~~~---~~- 114 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQA-G----ARKIYAVEAST-MAQHAEVLVKSNN---LTDRIVVIPGKVEEVS---LP- 114 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T----CSEEEEEECST-HHHHHHHHHHHTT---CTTTEEEEESCTTTCC---CS-
T ss_pred cCCcCEEEEcCCCccHHHHHHHhC-C----CCEEEEECCHH-HHHHHHHHHHHcC---CCCcEEEEEcchhhCC---CC-
Confidence 457889999999999999999986 2 36999999996 8899999998877 3478999987765542 12
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.+||+|+++.... +...+.....+.++.++|||||++++..
T Consensus 115 ~~~D~Ivs~~~~~-------~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 115 EQVDIIISEPMGY-------MLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp SCEEEEEECCCBT-------TBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred CceeEEEEeCchh-------cCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 4799999984210 0012334678888999999999998543
No 215
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.44 E-value=1.9e-12 Score=112.37 Aligned_cols=115 Identities=11% Similarity=0.037 Sum_probs=83.7
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhc--cccccccceEEEecChhhhhhcCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKT--TSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
..+.+|||||||+|..+..++++.+ ..+|+++|+++.+++.|++++... + ....+++++.+|..+.... .
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDid~~~i~~ar~~~~~~~~~--~~~~rv~v~~~Da~~~l~~--~ 165 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPS----VESVVQCEIDEDVIQVSKKFLPGMAIG--YSSSKLTLHVGDGFEFMKQ--N 165 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT----CCEEEEEESCHHHHHHHHHHCHHHHGG--GGCTTEEEEESCHHHHHHT--C
T ss_pred CCCCEEEEECCCchHHHHHHHHcCC----CCEEEEEECCHHHHHHHHHHhHHhhcc--cCCCcEEEEECcHHHHHhh--C
Confidence 4668999999999999999998743 479999999999999999998652 2 0146899998887654332 2
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+..||+|+++....... .......++++++.++|||||++++...
T Consensus 166 ~~~fD~Ii~d~~~~~~~-----~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 166 QDAFDVIITDSSDPMGP-----AESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp SSCEEEEEEECC----------------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCceEEEECCCCCCCc-----chhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 35799999985321000 0001235789999999999999988764
No 216
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.44 E-value=1.2e-12 Score=124.93 Aligned_cols=113 Identities=18% Similarity=0.197 Sum_probs=85.0
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccc--cccccceEEEecChhhhhhcCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTS--KAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~--~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
..++.+|||+|||+|.++..+++..++ ..+|+|||+|+.|++.|++++..... .....++++++++..++ ..
T Consensus 719 ~~~g~rVLDVGCGTG~lai~LAr~g~p---~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dL---p~ 792 (950)
T 3htx_A 719 ESSASTLVDFGCGSGSLLDSLLDYPTS---LQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEF---DS 792 (950)
T ss_dssp HSCCSEEEEETCSSSHHHHHHTSSCCC---CCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSC---CT
T ss_pred ccCCCEEEEECCCCCHHHHHHHHhCCC---CCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhC---Cc
Confidence 347889999999999999999987532 36999999999999999997754210 00145899998776553 33
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechh--hHHHHHHHHHhcccCCcEEEEEEe
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSE--TTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+..||+|++. .++++.+ ....+++++.++|||| ++++.+.
T Consensus 793 ~d~sFDlVV~~---------eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 793 RLHDVDIGTCL---------EVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp TSCSCCEEEEE---------SCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred ccCCeeEEEEe---------CchhhCChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 45689999997 3454443 3457999999999999 7777664
No 217
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.44 E-value=2.5e-12 Score=114.76 Aligned_cols=103 Identities=14% Similarity=0.068 Sum_probs=85.1
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhc---------------cccccccceEEEe
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKT---------------TSKAEKGLVKLFN 158 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~---------------~~~~~~~~v~~~~ 158 (267)
++.+|||+|||+|..++.+|++.+ +.+|+++|+++++++.+++|++.+ + ..++++++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~----~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~g----l~~i~v~~ 118 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP----AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKG----EKTIVINH 118 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS----CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEES----SSEEEEEE
T ss_pred CCCEEEECCCchhHHHHHHHHhCC----CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccC----CCceEEEc
Confidence 688999999999999999999864 368999999999999999999988 5 34589999
Q ss_pred cChhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 159 MCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 159 ~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
+|..++.... ...||+|+.|++.. ...+++.+.+.|||||++++++
T Consensus 119 ~Da~~~~~~~--~~~fD~I~lDP~~~-------------~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 119 DDANRLMAER--HRYFHFIDLDPFGS-------------PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp SCHHHHHHHS--TTCEEEEEECCSSC-------------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcHHHHHHhc--cCCCCEEEeCCCCC-------------HHHHHHHHHHhcCCCCEEEEEe
Confidence 8887765433 23699999885221 1478999999999999998876
No 218
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.44 E-value=1.3e-13 Score=115.46 Aligned_cols=128 Identities=15% Similarity=0.072 Sum_probs=89.4
Q ss_pred CCCEEEEecCCCChHHHHHHHh---cCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhh--hcC
Q 041272 94 KGDTVVDATCGNGYDTLMMLKM---VADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRME--EIV 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~---~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~--~~~ 168 (267)
++.+|||||||+|..+..+++. +++ +++|+|||+|+++++.|+. ...++++++++..+.. ...
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~---~~~V~gvD~s~~~l~~a~~---------~~~~v~~~~gD~~~~~~l~~~ 148 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGI---DCQVIGIDRDLSRCQIPAS---------DMENITLHQGDCSDLTTFEHL 148 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTC---CCEEEEEESCCTTCCCCGG---------GCTTEEEEECCSSCSGGGGGG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCC---CCEEEEEeCChHHHHHHhc---------cCCceEEEECcchhHHHHHhh
Confidence 5679999999999999999987 332 5899999999999988872 1367999988876541 111
Q ss_pred CCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHh-cccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceEE
Q 041272 169 PKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAER-ILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWIC 247 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~-~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 247 (267)
.+.+||+|+++... .....+++++.+ +|||||++++.+..... .......+.++++..+ ..|.+
T Consensus 149 -~~~~fD~I~~d~~~------------~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~-~~~~~~~~~~~l~~~~-~~f~~ 213 (236)
T 2bm8_A 149 -REMAHPLIFIDNAH------------ANTFNIMKWAVDHLLEEGDYFIIEDMIPYW-YRYAPQLFSEYLGAFR-DVLSM 213 (236)
T ss_dssp -SSSCSSEEEEESSC------------SSHHHHHHHHHHHTCCTTCEEEECSCHHHH-HHHCHHHHHHHHHTTT-TTEEE
T ss_pred -ccCCCCEEEECCch------------HhHHHHHHHHHHhhCCCCCEEEEEeCcccc-cccCHHHHHHHHHhCc-ccEEE
Confidence 22368999988431 134679999997 99999999886531000 0011236677777665 35665
Q ss_pred E
Q 041272 248 C 248 (267)
Q Consensus 248 ~ 248 (267)
.
T Consensus 214 ~ 214 (236)
T 2bm8_A 214 D 214 (236)
T ss_dssp E
T ss_pred c
Confidence 3
No 219
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.44 E-value=1.4e-12 Score=107.53 Aligned_cols=95 Identities=16% Similarity=0.147 Sum_probs=74.7
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCc
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTA 173 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~ 173 (267)
++.+|||+|||+|.++..+++ . +|+|+|+.+++.|+++ +++++.++..++ ..++..
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~--------~--~~vD~s~~~~~~a~~~-----------~~~~~~~d~~~~---~~~~~~ 102 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKI--------K--IGVEPSERMAEIARKR-----------GVFVLKGTAENL---PLKDES 102 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTC--------C--EEEESCHHHHHHHHHT-----------TCEEEECBTTBC---CSCTTC
T ss_pred CCCcEEEeCCCCCHHHHHHHH--------H--hccCCCHHHHHHHHhc-----------CCEEEEcccccC---CCCCCC
Confidence 488999999999999987652 2 9999999999999885 356666555433 233457
Q ss_pred EEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 174 VRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 174 ~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
||+|+++ .++++.++...+++++.++|||||++++....
T Consensus 103 fD~v~~~---------~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 103 FDFALMV---------TTICFVDDPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp EEEEEEE---------SCGGGSSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eeEEEEc---------chHhhccCHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 9999988 34444566789999999999999999998764
No 220
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.44 E-value=1.5e-12 Score=113.47 Aligned_cols=116 Identities=14% Similarity=0.057 Sum_probs=82.5
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
...+.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++..........+++++.+|..+.... .+
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~----~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~ 179 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHES----VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN--HK 179 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTT----CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH--CT
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCC----CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh--cC
Confidence 34567999999999999999998743 4799999999999999999986531000136899998887654332 23
Q ss_pred CcEEEEEEeCCCCCCCCCceeechh-hHHHHHHHHHhcccCCcEEEEEE
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSE-TTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~-~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
..||+|+++... |.. .... ...++++++.++|||||++++..
T Consensus 180 ~~fD~Ii~d~~~-~~~-----~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 180 NEFDVIITDSSD-PVG-----PAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp TCEEEEEECCC-------------------HHHHHHHHEEEEEEEEEEC
T ss_pred CCceEEEEcCCC-CCC-----cchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 479999998532 110 0001 11689999999999999998865
No 221
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.44 E-value=1e-12 Score=116.08 Aligned_cols=136 Identities=15% Similarity=0.097 Sum_probs=93.9
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
++++.+|||||||+|..+..+++..+ +.+++++|+ +.++. +++++..+ ...+++++.+|.. +..+
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p----~~~~~~~D~-~~~~~--~~~~~~~~---~~~~v~~~~~d~~---~~~p-- 246 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHP----GLQGVLLDR-AEVVA--RHRLDAPD---VAGRWKVVEGDFL---REVP-- 246 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCT----TEEEEEEEC-HHHHT--TCCCCCGG---GTTSEEEEECCTT---TCCC--
T ss_pred ccCCceEEEECCccCHHHHHHHHHCC----CCEEEEecC-HHHhh--cccccccC---CCCCeEEEecCCC---CCCC--
Confidence 45778999999999999999999854 589999999 45554 44443333 3467999987653 2222
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhH--HHHHHHHHhcccCCcEEEEEEecCCCCChhhH----------------HHH
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETT--KMALEAAERILIPGGLISMVVYVGHPGGREEL----------------EAV 233 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~----------------~~~ 233 (267)
.||+|++. .++|+.++. .+++++++++|||||++++.+........... ...
T Consensus 247 -~~D~v~~~---------~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~ 316 (348)
T 3lst_A 247 -HADVHVLK---------RILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTA 316 (348)
T ss_dssp -CCSEEEEE---------SCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBH
T ss_pred -CCcEEEEe---------hhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCH
Confidence 68999887 345544433 79999999999999999998764332211100 012
Q ss_pred HHHHHhCCCCceEEEEEee
Q 041272 234 EAFARSLSVDDWICCKFQM 252 (267)
Q Consensus 234 ~~~~~~l~~~~~~~~~~~~ 252 (267)
.+|.+.+...+|++++...
T Consensus 317 ~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 317 AELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp HHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHCCCceEEEEE
Confidence 3455556667898887765
No 222
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.43 E-value=4e-13 Score=108.90 Aligned_cols=110 Identities=21% Similarity=0.170 Sum_probs=76.4
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh-----
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE----- 166 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~----- 166 (267)
++++.+|||+|||+|.++..++++ +++|+|+|+++.. . ..+++++++|..+...
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~------~~~V~gvD~~~~~-----------~----~~~v~~~~~D~~~~~~~~~~~ 81 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL------ARKIISIDLQEME-----------E----IAGVRFIRCDIFKETIFDDID 81 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT------CSEEEEEESSCCC-----------C----CTTCEEEECCTTSSSHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc------CCcEEEEeccccc-----------c----CCCeEEEEccccCHHHHHHHH
Confidence 578999999999999999999987 3799999999841 1 3578888877654321
Q ss_pred -cCC--CCCcEEEEEEeCCCCCCCCCceee--chhhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 167 -IVP--KSTAVRLVAFNLGYLPGGDKSVIT--TSETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 167 -~~~--~~~~~d~ii~~~~~lp~~d~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
... ....||+|++|+..-........+ .......+++.+.++|||||.|++..+.+
T Consensus 82 ~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 82 RALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp HHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 111 002799999996321111111111 12334678999999999999999988843
No 223
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.43 E-value=9.6e-13 Score=111.83 Aligned_cols=110 Identities=15% Similarity=0.101 Sum_probs=79.7
Q ss_pred CEEEEecCCC--ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc------
Q 041272 96 DTVVDATCGN--GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI------ 167 (267)
Q Consensus 96 ~~VLDlGcG~--G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~------ 167 (267)
.+|||||||+ +..+..+++... |+.+|++||.|+.|++.|++++.... ..++++++.|..++...
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~---P~arVv~VD~sp~mLa~Ar~~l~~~~----~~~~~~v~aD~~~~~~~l~~~~~ 152 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVA---PESRVVYVDNDPIVLTLSQGLLASTP----EGRTAYVEADMLDPASILDAPEL 152 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHC---TTCEEEEEECCHHHHHTTHHHHCCCS----SSEEEEEECCTTCHHHHHTCHHH
T ss_pred CEEEEeCCCCCcccHHHHHHHHHC---CCCEEEEEeCChHHHHHHHHHhccCC----CCcEEEEEecccChhhhhccccc
Confidence 5899999997 445566665542 36899999999999999999887643 35799999888776321
Q ss_pred ---CCCCCcEEEEEEeCCCCCCCCCceeechhh---HHHHHHHHHhcccCCcEEEEEEecC
Q 041272 168 ---VPKSTAVRLVAFNLGYLPGGDKSVITTSET---TKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 168 ---~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~---~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
+..+.++ .++++ .++|+.++ +..+++++.+.|+|||+|+++....
T Consensus 153 ~~~~D~~~p~-av~~~---------avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 153 RDTLDLTRPV-ALTVI---------AIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp HTTCCTTSCC-EEEEE---------SCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred ccccCcCCcc-hHHhh---------hhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 1112233 35555 24443333 5789999999999999999988754
No 224
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.43 E-value=4.5e-12 Score=103.32 Aligned_cols=102 Identities=20% Similarity=0.146 Sum_probs=79.1
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
..++.+|||+|||+|.++..+++. + ..+|+|+|+|+.+++.|+++++.++ . ++++++++..++.
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~-~----~~~v~~vD~~~~~~~~a~~~~~~~~----~-~~~~~~~d~~~~~------ 110 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLL-G----AKEVICVEVDKEAVDVLIENLGEFK----G-KFKVFIGDVSEFN------ 110 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHT-T----CSEEEEEESCHHHHHHHHHHTGGGT----T-SEEEEESCGGGCC------
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHc-C----CCEEEEEECCHHHHHHHHHHHHHcC----C-CEEEEECchHHcC------
Confidence 457889999999999999999987 2 2589999999999999999998876 2 7899987775542
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
..||+|++|+++..... .....+++++.+++ || +++.+
T Consensus 111 ~~~D~v~~~~p~~~~~~-------~~~~~~l~~~~~~l--~~-~~~~~ 148 (207)
T 1wy7_A 111 SRVDIVIMNPPFGSQRK-------HADRPFLLKAFEIS--DV-VYSIH 148 (207)
T ss_dssp CCCSEEEECCCCSSSST-------TTTHHHHHHHHHHC--SE-EEEEE
T ss_pred CCCCEEEEcCCCccccC-------CchHHHHHHHHHhc--Cc-EEEEE
Confidence 27999999987643321 12247888898888 44 55555
No 225
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.42 E-value=3.7e-12 Score=113.63 Aligned_cols=107 Identities=6% Similarity=-0.024 Sum_probs=83.0
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh-hhhcCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR-MEEIVPKS 171 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~~~ 171 (267)
.++.+|||+| |+|.++..+++... ..+|+|+|+++.|++.|+++++.++ ..+++++.+|..+ +... .+
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~----~~~v~~vDi~~~~l~~a~~~~~~~g----~~~v~~~~~D~~~~l~~~--~~ 239 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGL----PKRIAVLDIDERLTKFIEKAANEIG----YEDIEIFTFDLRKPLPDY--AL 239 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTC----CSEEEEECSCHHHHHHHHHHHHHHT----CCCEEEECCCTTSCCCTT--TS
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHHHHHcC----CCCEEEEEChhhhhchhh--cc
Confidence 3678999999 99999999998632 3799999999999999999999877 3489999877654 2211 13
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEE-EEEEe
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLI-SMVVY 220 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l-~i~~~ 220 (267)
..||+|++|+++.+. ....+++++.++|||||++ ++.+.
T Consensus 240 ~~fD~Vi~~~p~~~~----------~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 240 HKFDTFITDPPETLE----------AIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp SCBSEEEECCCSSHH----------HHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred CCccEEEECCCCchH----------HHHHHHHHHHHHcccCCeEEEEEEe
Confidence 479999999654221 2378999999999999954 44444
No 226
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.41 E-value=2.1e-12 Score=113.97 Aligned_cols=136 Identities=16% Similarity=0.212 Sum_probs=91.3
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCC-CCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADE-SSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~-~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
.++.+|||+|||+|.++..+++.++.. ....+|+|+|+++.+++.|+.++...+ . ++.+++++... .. ..
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g----~-~~~i~~~D~l~---~~-~~ 199 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR----Q-KMTLLHQDGLA---NL-LV 199 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT----C-CCEEEESCTTS---CC-CC
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC----C-CceEEECCCCC---cc-cc
Confidence 356799999999999999999886420 001689999999999999999998776 2 67787766532 11 23
Q ss_pred CcEEEEEEeCCC--CCCCCCc--e----e-echhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHH
Q 041272 172 TAVRLVAFNLGY--LPGGDKS--V----I-TTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFAR 238 (267)
Q Consensus 172 ~~~d~ii~~~~~--lp~~d~~--~----~-~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~ 238 (267)
..||+|++|+++ ++..+.. . . -.......+++.+.+.|||||+++++...+...+. ....+.+++.
T Consensus 200 ~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~-~~~~ir~~l~ 274 (344)
T 2f8l_A 200 DPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTS-DFAKVDKFIK 274 (344)
T ss_dssp CCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGST-THHHHHHHHH
T ss_pred CCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCc-hHHHHHHHHH
Confidence 479999999874 2211000 0 0 00012236899999999999999998865422221 2344555544
No 227
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.41 E-value=1.4e-12 Score=102.87 Aligned_cols=111 Identities=20% Similarity=0.197 Sum_probs=77.3
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh-----
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE----- 166 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~----- 166 (267)
++++.+|||+|||+|.++..+++.++. +.+|+|+|+++ +++. .+++++..+..+...
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~---~~~v~~~D~~~-~~~~--------------~~~~~~~~d~~~~~~~~~~~ 81 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGG---KGRIIACDLLP-MDPI--------------VGVDFLQGDFRDELVMKALL 81 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCT---TCEEEEEESSC-CCCC--------------TTEEEEESCTTSHHHHHHHH
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCC---CCeEEEEECcc-cccc--------------CcEEEEEcccccchhhhhhh
Confidence 568889999999999999999998643 47999999999 7532 457777766655421
Q ss_pred -cCCCCCcEEEEEEeCCCCCCCCCceee--chhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 167 -IVPKSTAVRLVAFNLGYLPGGDKSVIT--TSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 167 -~~~~~~~~d~ii~~~~~lp~~d~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
.. ++..||+|+++.+..........+ .......+++++.++|||||.+++..+.
T Consensus 82 ~~~-~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 82 ERV-GDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp HHH-TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred ccC-CCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 02 234799999985431111100000 0011268999999999999999988774
No 228
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.41 E-value=6.1e-13 Score=118.31 Aligned_cols=114 Identities=17% Similarity=0.166 Sum_probs=83.4
Q ss_pred HHhhHHHhhhcCCCCEEEEecCC------CChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceE
Q 041272 82 IAANGVWKHVVRKGDTVVDATCG------NGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVK 155 (267)
Q Consensus 82 ~~~~~l~~~~l~~~~~VLDlGcG------~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~ 155 (267)
.....++.....++.+||||||| +|..++.+++.+. |+++|+|||+|+.|. . . ..+++
T Consensus 204 ~~Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~f---P~a~V~GVDiSp~m~--------~-~----~~rI~ 267 (419)
T 3sso_A 204 PHYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFF---PRGQIYGLDIMDKSH--------V-D----ELRIR 267 (419)
T ss_dssp HHHHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHC---TTCEEEEEESSCCGG--------G-C----BTTEE
T ss_pred HHHHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhC---CCCEEEEEECCHHHh--------h-c----CCCcE
Confidence 34444444444567899999999 7777888877642 368999999999982 1 1 36899
Q ss_pred EEecChhhhhhc---CCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 156 LFNMCHSRMEEI---VPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 156 ~~~~~~~~l~~~---~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
++++|..++... ...+.+||+|+++. .+...+...+|++++++|||||++++.+..
T Consensus 268 fv~GDa~dlpf~~~l~~~d~sFDlVisdg----------sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 268 TIQGDQNDAEFLDRIARRYGPFDIVIDDG----------SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp EEECCTTCHHHHHHHHHHHCCEEEEEECS----------CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred EEEecccccchhhhhhcccCCccEEEECC----------cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 999888765322 11124799999872 234567789999999999999999998654
No 229
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.39 E-value=2.4e-12 Score=104.43 Aligned_cols=112 Identities=16% Similarity=0.159 Sum_probs=74.3
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhh------
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRME------ 165 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~------ 165 (267)
++++.+|||+|||+|.++..++++++. ++++|+|+|+|+.+ . ..++++++++..+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~--~~~~v~gvD~s~~~-----------~----~~~v~~~~~d~~~~~~~~~~~ 82 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKN--YKNKIIGIDKKIMD-----------P----IPNVYFIQGEIGKDNMNNIKN 82 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTT--SCEEEEEEESSCCC-----------C----CTTCEEEECCTTTTSSCCC--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCC--CCceEEEEeCCccC-----------C----CCCceEEEccccchhhhhhcc
Confidence 578899999999999999999998641 03799999999931 1 246777776665432
Q ss_pred -----------------hcCCCCCcEEEEEEeCCCCCCCCCceee--chhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 166 -----------------EIVPKSTAVRLVAFNLGYLPGGDKSVIT--TSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 166 -----------------~~~~~~~~~d~ii~~~~~lp~~d~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
.. .++..||+|+++............+ ......++++++.++|||||.+++..+.
T Consensus 83 ~~~i~~~~~~~~~~~~~~~-~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 83 INYIDNMNNNSVDYKLKEI-LQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp ---------CHHHHHHHHH-HTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccccccccchhhHHHHHhh-cCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 00 1234799999985321000000000 0111235899999999999999987764
No 230
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.39 E-value=1.7e-12 Score=119.41 Aligned_cols=106 Identities=14% Similarity=0.162 Sum_probs=82.3
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
..++.+|||||||+|.++..+++. + ..+|+|+|+|+ +++.|+++++.++ +..+++++.++..++. . .
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~-~----~~~V~gvD~s~-~l~~A~~~~~~~g---l~~~v~~~~~d~~~~~---~-~ 222 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQA-G----ARKIYAVEAST-MAQHAEVLVKSNN---LTDRIVVIPGKVEEVS---L-P 222 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHT-T----CSEEEEEECHH-HHHHHHHHHHHTT---CTTTEEEEESCTTTCC---C-S
T ss_pred hcCCCEEEEecCcccHHHHHHHHc-C----CCEEEEEEcHH-HHHHHHHHHHHcC---CCCcEEEEECchhhCc---c-C
Confidence 346789999999999999999885 2 46999999999 9999999999877 4478999987765532 1 2
Q ss_pred CcEEEEEEeCCCCCCCCCceee-chhhHHHHHHHHHhcccCCcEEEEE
Q 041272 172 TAVRLVAFNLGYLPGGDKSVIT-TSETTKMALEAAERILIPGGLISMV 218 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~ 218 (267)
.+||+|+++.. ..+ ..+.....+.++.++|||||++++.
T Consensus 223 ~~fD~Ivs~~~--------~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 223 EQVDIIISEPM--------GYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp SCEEEEECCCC--------HHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred CCeEEEEEeCc--------hHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 37999999842 011 1244566778899999999999853
No 231
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.38 E-value=9.9e-13 Score=123.58 Aligned_cols=111 Identities=13% Similarity=0.094 Sum_probs=87.8
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+..+.+|||||||+|.++..||+. +++|+|||.++.+|+.|+.++.+.+ ..++++.+++.+++..... +
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~------ga~V~giD~~~~~i~~a~~~a~~~~----~~~~~~~~~~~~~~~~~~~-~ 132 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK------GATIVGIDFQQENINVCRALAEENP----DFAAEFRVGRIEEVIAALE-E 132 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHTST----TSEEEEEECCHHHHHHHCC-T
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC------CCEEEEECCCHHHHHHHHHHHHhcC----CCceEEEECCHHHHhhhcc-C
Confidence 456679999999999999999997 5899999999999999999998866 4579999998888865432 3
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHH--HHHHHHHhcccCCcEEEEEEecC
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTK--MALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~--~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
..||+|++. .+++|.++.. ..+..+.+.|+++|..++....+
T Consensus 133 ~~fD~v~~~---------e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 133 GEFDLAIGL---------SVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp TSCSEEEEE---------SCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred CCccEEEEC---------cchhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 479999887 5666655543 33455777789988887776644
No 232
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.38 E-value=6.8e-12 Score=111.13 Aligned_cols=139 Identities=12% Similarity=0.035 Sum_probs=98.6
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.+..+|||||||+|..+..++++. |+.+++..|. |++++.|++++...+ ..+++++.+|.. +...+
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~----p~~~~~~~dl-p~v~~~a~~~~~~~~----~~rv~~~~gD~~---~~~~~- 243 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLY----PGCKITVFDI-PEVVWTAKQHFSFQE----EEQIDFQEGDFF---KDPLP- 243 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHC----SSCEEEEEEC-HHHHHHHHHHSCC------CCSEEEEESCTT---TSCCC-
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhC----CCceeEeccC-HHHHHHHHHhhhhcc----cCceeeecCccc---cCCCC-
Confidence 3566799999999999999999995 5689999997 889999999886644 578999987653 22222
Q ss_pred CcEEEEEEeCCCCCCCCCceeech--hhHHHHHHHHHhcccCCcEEEEEEecCCCCC--hhhHH---------------H
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTS--ETTKMALEAAERILIPGGLISMVVYVGHPGG--REELE---------------A 232 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~--~~~~~---------------~ 232 (267)
.+|++++. .++|.. +...++|+++++.|+|||+++|.+..-.+.. ..... .
T Consensus 244 -~~D~~~~~---------~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert 313 (353)
T 4a6d_A 244 -EADLYILA---------RVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERT 313 (353)
T ss_dssp -CCSEEEEE---------SSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCC
T ss_pred -CceEEEee---------eecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCC
Confidence 35777776 355533 3346899999999999999999886432211 11110 1
Q ss_pred HHHHHHhCCCCceEEEEEeee
Q 041272 233 VEAFARSLSVDDWICCKFQML 253 (267)
Q Consensus 233 ~~~~~~~l~~~~~~~~~~~~~ 253 (267)
..+|.+.+...+|+.+++...
T Consensus 314 ~~e~~~ll~~AGf~~v~v~~~ 334 (353)
T 4a6d_A 314 PTHYHMLLSSAGFRDFQFKKT 334 (353)
T ss_dssp HHHHHHHHHHHTCEEEEEECC
T ss_pred HHHHHHHHHHCCCceEEEEEc
Confidence 245556666678988876654
No 233
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.37 E-value=2.2e-12 Score=115.43 Aligned_cols=107 Identities=16% Similarity=0.169 Sum_probs=86.6
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccc-eEEEecChhhhhh-cCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGL-VKLFNMCHSRMEE-IVPK 170 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~-v~~~~~~~~~l~~-~~~~ 170 (267)
+++.+|||++||+|.+++.+|.+.+. ..+|+++|+++.+++.+++|++.++ ...+ ++++.+|..++.. ..
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~g---a~~V~avDi~~~av~~~~~N~~~Ng---l~~~~v~v~~~Da~~~l~~~~-- 122 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSC---VEKAYANDISSKAIEIMKENFKLNN---IPEDRYEIHGMEANFFLRKEW-- 122 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSC---EEEEEEECSCHHHHHHHHHHHHHTT---CCGGGEEEECSCHHHHHHSCC--
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCC---CCEEEEEECCHHHHHHHHHHHHHhC---CCCceEEEEeCCHHHHHHHhh--
Confidence 46889999999999999999987531 2689999999999999999999988 3344 9999988877654 33
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
...||+|+.|+ + . ....+++.+.+.|+|||++++++.
T Consensus 123 ~~~fD~V~lDP-~--g----------~~~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 123 GFGFDYVDLDP-F--G----------TPVPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp SSCEEEEEECC-S--S----------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCcEEEECC-C--c----------CHHHHHHHHHHHhCCCCEEEEEec
Confidence 23699999995 1 1 113689999999999999988773
No 234
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.36 E-value=9.6e-12 Score=100.95 Aligned_cols=99 Identities=17% Similarity=0.108 Sum_probs=73.0
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
..++.+|||+|||+|.++..+++. + ..+|+|+|+|+.+++.|++++. ++++++++..++.
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~-~----~~~v~~vD~~~~~~~~a~~~~~---------~~~~~~~d~~~~~------ 108 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLL-G----AESVTAFDIDPDAIETAKRNCG---------GVNFMVADVSEIS------ 108 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHT-T----BSEEEEEESCHHHHHHHHHHCT---------TSEEEECCGGGCC------
T ss_pred CCCCCEEEEEeCCccHHHHHHHHc-C----CCEEEEEECCHHHHHHHHHhcC---------CCEEEECcHHHCC------
Confidence 457789999999999999999987 2 3589999999999999998754 5778887765532
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
..||+|++|+++....+ ....++++++.+.+ |.+++++.
T Consensus 109 ~~~D~v~~~~p~~~~~~-------~~~~~~l~~~~~~~---g~~~~~~~ 147 (200)
T 1ne2_A 109 GKYDTWIMNPPFGSVVK-------HSDRAFIDKAFETS---MWIYSIGN 147 (200)
T ss_dssp CCEEEEEECCCC--------------CHHHHHHHHHHE---EEEEEEEE
T ss_pred CCeeEEEECCCchhccC-------chhHHHHHHHHHhc---CcEEEEEc
Confidence 37999999976532211 11247889999988 44555554
No 235
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.35 E-value=7.8e-12 Score=111.36 Aligned_cols=133 Identities=14% Similarity=0.092 Sum_probs=92.9
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||||||+|..+..+++.+ |+.+++++|+ +.+++.|++ ..+++++.+|..+ ..+ .
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~----p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~---~~p-~ 261 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY----PSINAINFDL-PHVIQDAPA----------FSGVEHLGGDMFD---GVP-K 261 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC----TTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTT---CCC-C
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC----CCCEEEEEeh-HHHHHhhhh----------cCCCEEEecCCCC---CCC-C
Confidence 4567899999999999999999986 4589999999 888877654 2578898876543 222 2
Q ss_pred CcEEEEEEeCCCCCCCCCceeec--hhhHHHHHHHHHhcccCCcEEEEEEecCCCCC---hhh-H------H--------
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITT--SETTKMALEAAERILIPGGLISMVVYVGHPGG---REE-L------E-------- 231 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~--~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---~~~-~------~-------- 231 (267)
. |++++. .++|+ .+...+++++++++|||||++++.+....... ... . .
T Consensus 262 ~--D~v~~~---------~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g 330 (368)
T 3reo_A 262 G--DAIFIK---------WICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGG 330 (368)
T ss_dssp C--SEEEEE---------SCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBC
T ss_pred C--CEEEEe---------chhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCC
Confidence 2 888777 34442 23456899999999999999999876432211 000 0 0
Q ss_pred ---HHHHHHHhCCCCceEEEEEeeec
Q 041272 232 ---AVEAFARSLSVDDWICCKFQMLN 254 (267)
Q Consensus 232 ---~~~~~~~~l~~~~~~~~~~~~~~ 254 (267)
...+|.+.+...+|+.++.....
T Consensus 331 ~~rt~~e~~~ll~~AGF~~v~~~~~~ 356 (368)
T 3reo_A 331 KERTEKEFQALAMASGFRGFKVASCA 356 (368)
T ss_dssp CCCCHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccCCHHHHHHHHHHCCCeeeEEEEeC
Confidence 02345555666788888776654
No 236
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.35 E-value=6.4e-13 Score=113.15 Aligned_cols=112 Identities=15% Similarity=0.064 Sum_probs=74.1
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEE--ecChhhhhhc
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLF--NMCHSRMEEI 167 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~ 167 (267)
..++++.+|||+|||+|.++..+++. ++|+|||+++ |+..++++..... ....++.++ ++|..++.
T Consensus 70 ~~~~~g~~VLDlGcGtG~~s~~la~~-------~~V~gvD~s~-m~~~a~~~~~~~~--~~~~~v~~~~~~~D~~~l~-- 137 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRGGWSYYAASR-------PHVMDVRAYT-LGVGGHEVPRITE--SYGWNIVKFKSRVDIHTLP-- 137 (265)
T ss_dssp TSCCCCEEEEEESCTTSHHHHHHHTS-------TTEEEEEEEC-CCCSSCCCCCCCC--BTTGGGEEEECSCCTTTSC--
T ss_pred CCCCCCCEEEEeCcCCCHHHHHHHHc-------CcEEEEECch-hhhhhhhhhhhhh--ccCCCeEEEecccCHhHCC--
Confidence 45678999999999999999999986 4799999999 5433322211000 011267888 76655432
Q ss_pred CCCCCcEEEEEEeCCCCCCCCCceeechhh--HHHHHHHHHhcccCCc--EEEEEEec
Q 041272 168 VPKSTAVRLVAFNLGYLPGGDKSVITTSET--TKMALEAAERILIPGG--LISMVVYV 221 (267)
Q Consensus 168 ~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~--~~~~l~~~~~~LkpgG--~l~i~~~~ 221 (267)
+..||+|++++..+. . ....+. ...+++.+.++||||| .+++.++.
T Consensus 138 ---~~~fD~V~sd~~~~~-~----~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 138 ---VERTDVIMCDVGESS-P----KWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp ---CCCCSEEEECCCCCC-S----CHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred ---CCCCcEEEEeCcccC-C----ccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 347999999854211 0 000111 1238899999999999 99887763
No 237
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.35 E-value=4.4e-12 Score=108.38 Aligned_cols=112 Identities=15% Similarity=0.110 Sum_probs=77.3
Q ss_pred CCCEEEEecCCCCh----HHHHHHHhcCCCCC-CcEEEEEeCChHHHHHHHHHHhhc-----------------------
Q 041272 94 KGDTVVDATCGNGY----DTLMMLKMVADESS-AGCVYGLDIQSEALKSTSSLLDKT----------------------- 145 (267)
Q Consensus 94 ~~~~VLDlGcG~G~----~~~~la~~~~~~~p-~~~v~giD~s~~~i~~a~~~~~~~----------------------- 145 (267)
++.+|||+|||||. ++..+++..+. .+ +.+|+|+|+|+.|++.|++++...
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~-~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~ 183 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGM-APGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHE 183 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCS-CTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSC
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhccc-CCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCC
Confidence 45699999999998 66777776542 01 369999999999999999975210
Q ss_pred cc----cccccceEEEecChhhhhhcCCCCCcEEEEEEeCCCCCCCCCceee--chhhHHHHHHHHHhcccCCcEEEE
Q 041272 146 TS----KAEKGLVKLFNMCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVIT--TSETTKMALEAAERILIPGGLISM 217 (267)
Q Consensus 146 ~~----~~~~~~v~~~~~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i 217 (267)
+. +....+|.|.+.+..+. ..+....||+|++.. +++ ..+...++++++++.|||||+|++
T Consensus 184 ~~~~v~~~lr~~V~F~~~dl~~~--~~~~~~~fDlI~crn---------vliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 184 GLVRVRQELANYVEFSSVNLLEK--QYNVPGPFDAIFCRN---------VMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp SEEEECHHHHTTEEEEECCTTCS--SCCCCCCEEEEEECS---------SGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CceeechhhcccCeEEecccCCC--CCCcCCCeeEEEECC---------chHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 00 00113678877554331 112134799999862 322 345568999999999999999976
No 238
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.35 E-value=6.1e-12 Score=101.50 Aligned_cols=110 Identities=16% Similarity=0.150 Sum_probs=74.0
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCC-----CCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEE-ecChhhhh
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADE-----SSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLF-NMCHSRME 165 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~-----~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~-~~~~~~l~ 165 (267)
++++.+|||+|||+|.++..+++.++.. .+..+|+|+|+|+.+ . ..+++++ .++..+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~----~~~~~~~~~~d~~~~~ 84 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------P----LEGATFLCPADVTDPR 84 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------C----CTTCEEECSCCTTSHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------c----CCCCeEEEeccCCCHH
Confidence 6788999999999999999999986420 001799999999842 1 2456677 66544322
Q ss_pred hc-----CCCCCcEEEEEEeCCCCCCCCCceeechhh-------HHHHHHHHHhcccCCcEEEEEEec
Q 041272 166 EI-----VPKSTAVRLVAFNLGYLPGGDKSVITTSET-------TKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 166 ~~-----~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~-------~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
.. ..++..||+|+++.... ...++..+ ...+++++.++|||||++++.++.
T Consensus 85 ~~~~~~~~~~~~~fD~V~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 85 TSQRILEVLPGRRADVILSDMAPN-----ATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHHHHHHSGGGCEEEEEECCCCC-----CCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHhcCCCCCcEEEeCCCCC-----CCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 10 11234799999985210 01111111 258899999999999999998773
No 239
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.35 E-value=5.9e-13 Score=113.99 Aligned_cols=112 Identities=18% Similarity=0.069 Sum_probs=74.5
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEE--ecChhhhhhc
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLF--NMCHSRMEEI 167 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~ 167 (267)
..++++.+|||+|||+|.++..++++ ++|+|||+++ |+..++++..... ....++.++ ++|..++.
T Consensus 78 ~~~~~g~~VLDlGcGtG~~s~~la~~-------~~V~gVD~s~-m~~~a~~~~~~~~--~~~~~v~~~~~~~D~~~l~-- 145 (276)
T 2wa2_A 78 GGVELKGTVVDLGCGRGSWSYYAASQ-------PNVREVKAYT-LGTSGHEKPRLVE--TFGWNLITFKSKVDVTKME-- 145 (276)
T ss_dssp TSCCCCEEEEEESCTTCHHHHHHHTS-------TTEEEEEEEC-CCCTTSCCCCCCC--CTTGGGEEEECSCCGGGCC--
T ss_pred CCCCCCCEEEEeccCCCHHHHHHHHc-------CCEEEEECch-hhhhhhhchhhhh--hcCCCeEEEeccCcHhhCC--
Confidence 34678899999999999999999987 4699999999 6444433211100 011278888 76665432
Q ss_pred CCCCCcEEEEEEeCCCCCCCCCceeechhhH--HHHHHHHHhcccCCc--EEEEEEec
Q 041272 168 VPKSTAVRLVAFNLGYLPGGDKSVITTSETT--KMALEAAERILIPGG--LISMVVYV 221 (267)
Q Consensus 168 ~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~--~~~l~~~~~~LkpgG--~l~i~~~~ 221 (267)
+.+||+|++++..+. . ....+.. ..+++++.++||||| .+++.++.
T Consensus 146 ---~~~fD~Vvsd~~~~~-~----~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 146 ---PFQADTVLCDIGESN-P----TAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp ---CCCCSEEEECCCCCC-S----CHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred ---CCCcCEEEECCCcCC-C----chhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 347999999854210 0 0011111 247899999999999 99887763
No 240
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.34 E-value=1.7e-11 Score=110.72 Aligned_cols=126 Identities=22% Similarity=0.213 Sum_probs=87.0
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||+|||+|.++..++++.+. ..+|+|+|+++.+++.| .+++++++|..+. . ...
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~---~~~i~gvDi~~~~~~~a-------------~~~~~~~~D~~~~---~-~~~ 97 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGT---AYRFVGVEIDPKALDLP-------------PWAEGILADFLLW---E-PGE 97 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCS---CSEEEEEESCTTTCCCC-------------TTEEEEESCGGGC---C-CSS
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCC---CCeEEEEECCHHHHHhC-------------CCCcEEeCChhhc---C-ccC
Confidence 35679999999999999999988632 47999999999998776 2467777665433 2 234
Q ss_pred cEEEEEEeCCCCCCCCCc-----eeec---------------hhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHH
Q 041272 173 AVRLVAFNLGYLPGGDKS-----VITT---------------SETTKMALEAAERILIPGGLISMVVYVGHPGGREELEA 232 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~-----~~~~---------------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~ 232 (267)
.||+|++|++|....... .... ......+++.+.++|+|||+++++.....-.. .....
T Consensus 98 ~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~-~~~~~ 176 (421)
T 2ih2_A 98 AFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVL-EDFAL 176 (421)
T ss_dssp CEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTC-GGGHH
T ss_pred CCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcC-ccHHH
Confidence 799999999986654310 0000 01234779999999999999999887542211 12344
Q ss_pred HHHHHHh
Q 041272 233 VEAFARS 239 (267)
Q Consensus 233 ~~~~~~~ 239 (267)
+.+++..
T Consensus 177 lr~~l~~ 183 (421)
T 2ih2_A 177 LREFLAR 183 (421)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5555544
No 241
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.33 E-value=3.1e-11 Score=100.14 Aligned_cols=144 Identities=17% Similarity=0.074 Sum_probs=93.4
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.+..+|||||||+|.++..++ + +.+|+|+|+++.+++.+++++..++ .+..+...| +....++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~----~~~y~a~DId~~~i~~ar~~~~~~g-----~~~~~~v~D---~~~~~~~~- 167 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---G----IASVWGCDIHQGLGDVITPFAREKD-----WDFTFALQD---VLCAPPAE- 167 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---T----CSEEEEEESBHHHHHHHHHHHHHTT-----CEEEEEECC---TTTSCCCC-
T ss_pred CCCCeEEEecCCccHHHHHhc---c----CCeEEEEeCCHHHHHHHHHHHHhcC-----CCceEEEee---cccCCCCC-
Confidence 457799999999999999877 2 4899999999999999999988866 455665433 33333333
Q ss_pred cEEEEEEeCCCCCCCCCceeechh-hHHHHHHHHHhcccCCcEEEEEEecCCCCChh---hHHHHHHHHHhCCCCceEEE
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSE-TTKMALEAAERILIPGGLISMVVYVGHPGGRE---ELEAVEAFARSLSVDDWICC 248 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~ 248 (267)
.+|+++... .+++.+ ..+...-++.+.|+++|+++- .....-.+.. +......|.+.+....+.+.
T Consensus 168 ~~DvvLllk---------~lh~LE~q~~~~~~~ll~aL~~~~vvVs-fPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~ 237 (253)
T 3frh_A 168 AGDLALIFK---------LLPLLEREQAGSAMALLQSLNTPRMAVS-FPTRSLGGRGKGMEANYAAWFEGGLPAEFEIED 237 (253)
T ss_dssp BCSEEEEES---------CHHHHHHHSTTHHHHHHHHCBCSEEEEE-EECC-----------CHHHHHHHHSCTTEEEEE
T ss_pred CcchHHHHH---------HHHHhhhhchhhHHHHHHHhcCCCEEEE-cChHHhcCCCcchhhHHHHHHHHHhhccchhhh
Confidence 799998883 344332 222333488889999988743 3222211111 12233455566666667777
Q ss_pred EEeeecCCCCceEEEeec
Q 041272 249 KFQMLNRPLAPVLVFLFK 266 (267)
Q Consensus 249 ~~~~~~~~~~p~~~~~~k 266 (267)
++.+-| ..+++|+|
T Consensus 238 ~~~~~n----El~~~i~~ 251 (253)
T 3frh_A 238 KKTIGT----ELIYLIKK 251 (253)
T ss_dssp EEEETT----EEEEEEEE
T ss_pred heecCc----eEEEEEec
Confidence 776644 56777766
No 242
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.33 E-value=3.7e-12 Score=106.72 Aligned_cols=147 Identities=10% Similarity=0.058 Sum_probs=94.1
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.+..+|||||||+|-++..++... |..+|+++|+++.|++.+++++..++ .+..+... |+....+ .
T Consensus 130 i~~p~~VLDLGCG~GpLAl~~~~~~----p~a~y~a~DId~~~le~a~~~l~~~g-----~~~~~~v~---D~~~~~p-~ 196 (281)
T 3lcv_B 130 LPRPNTLRDLACGLNPLAAPWMGLP----AETVYIASDIDARLVGFVDEALTRLN-----VPHRTNVA---DLLEDRL-D 196 (281)
T ss_dssp SCCCSEEEETTCTTGGGCCTTTTCC----TTCEEEEEESBHHHHHHHHHHHHHTT-----CCEEEEEC---CTTTSCC-C
T ss_pred cCCCceeeeeccCccHHHHHHHhhC----CCCEEEEEeCCHHHHHHHHHHHHhcC-----CCceEEEe---eecccCC-C
Confidence 4556799999999999999998764 35899999999999999999999877 23455442 2333332 3
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhh--HHHHHHHHHhcccCCcEEEEEEe--c-CCCCChhhHHHHHHHHHhCCCCceE
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSET--TKMALEAAERILIPGGLISMVVY--V-GHPGGREELEAVEAFARSLSVDDWI 246 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~~--~-~~~~~~~~~~~~~~~~~~l~~~~~~ 246 (267)
..+|+++++. .+++.++ ....+ ++++.|+|+|+++-... . +...+.+ ......|.+.+...+++
T Consensus 197 ~~~DvaL~lk---------ti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~-~~Y~~~~e~~~~~~g~~ 265 (281)
T 3lcv_B 197 EPADVTLLLK---------TLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMF-QNYSQSFESQARERSCR 265 (281)
T ss_dssp SCCSEEEETT---------CHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHH-HHHHHHHHHHHHHHTCC
T ss_pred CCcchHHHHH---------HHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchh-hHHHHHHHHHHHhcCCc
Confidence 4799999883 4443332 23455 89999999999854322 1 1122222 22233444444445667
Q ss_pred EEEEeeecCCCCceEEEeec
Q 041272 247 CCKFQMLNRPLAPVLVFLFK 266 (267)
Q Consensus 247 ~~~~~~~~~~~~p~~~~~~k 266 (267)
+.+..+-| ..+++|+|
T Consensus 266 ~~~~~~~n----El~y~i~k 281 (281)
T 3lcv_B 266 IQRLEIGN----ELIYVIQK 281 (281)
T ss_dssp EEEEEETT----EEEEEEC-
T ss_pred eeeeeecC----eeEEEecC
Confidence 66666643 45555544
No 243
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.32 E-value=2.9e-12 Score=105.12 Aligned_cols=114 Identities=17% Similarity=0.164 Sum_probs=78.5
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
..++.+|||+|||+|.++..++ .+|+|+|+|+. ++.++.++..+ ...++
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l~---------~~v~~~D~s~~-------------------~~~~~~~d~~~---~~~~~ 113 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSIR---------NPVHCFDLASL-------------------DPRVTVCDMAQ---VPLED 113 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHCC---------SCEEEEESSCS-------------------STTEEESCTTS---CSCCT
T ss_pred cCCCCeEEEECCcCCHHHHHhh---------ccEEEEeCCCC-------------------CceEEEecccc---CCCCC
Confidence 3577899999999999987763 47999999987 12344444433 22334
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceEEEEEe
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWICCKFQ 251 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 251 (267)
..||+|+++. ++++ .+...+++++.++|||||++++.++..... ....+..+++ ..+|.++...
T Consensus 114 ~~fD~v~~~~---------~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~---~~~~~~~~l~---~~Gf~~~~~~ 177 (215)
T 2zfu_A 114 ESVDVAVFCL---------SLMG-TNIRDFLEEANRVLKPGGLLKVAEVSSRFE---DVRTFLRAVT---KLGFKIVSKD 177 (215)
T ss_dssp TCEEEEEEES---------CCCS-SCHHHHHHHHHHHEEEEEEEEEEECGGGCS---CHHHHHHHHH---HTTEEEEEEE
T ss_pred CCEeEEEEeh---------hccc-cCHHHHHHHHHHhCCCCeEEEEEEcCCCCC---CHHHHHHHHH---HCCCEEEEEe
Confidence 5799999883 2332 566799999999999999999987643221 2233444444 4568777654
Q ss_pred e
Q 041272 252 M 252 (267)
Q Consensus 252 ~ 252 (267)
.
T Consensus 178 ~ 178 (215)
T 2zfu_A 178 L 178 (215)
T ss_dssp C
T ss_pred c
Confidence 4
No 244
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.32 E-value=5.9e-12 Score=108.33 Aligned_cols=79 Identities=16% Similarity=0.172 Sum_probs=64.6
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+++++...+ ...+++++++|..++. .+
T Consensus 25 ~~~~~~~VLDiG~G~G~lt~~L~~~------~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~D~~~~~---~~ 92 (285)
T 1zq9_A 25 ALRPTDVVLEVGPGTGNMTVKLLEK------AKKVVACELDPRLVAELHKRVQGTP---VASKLQVLVGDVLKTD---LP 92 (285)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHHHH------SSEEEEEESCHHHHHHHHHHHTTST---TGGGEEEEESCTTTSC---CC
T ss_pred CCCCCCEEEEEcCcccHHHHHHHhh------CCEEEEEECCHHHHHHHHHHHHhcC---CCCceEEEEcceeccc---ch
Confidence 4567889999999999999999998 3689999999999999999987655 2368999987765431 11
Q ss_pred CCcEEEEEEeCCC
Q 041272 171 STAVRLVAFNLGY 183 (267)
Q Consensus 171 ~~~~d~ii~~~~~ 183 (267)
.||.|++|++|
T Consensus 93 --~fD~vv~nlpy 103 (285)
T 1zq9_A 93 --FFDTCVANLPY 103 (285)
T ss_dssp --CCSEEEEECCG
T ss_pred --hhcEEEEecCc
Confidence 58999999765
No 245
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.31 E-value=4.6e-12 Score=107.65 Aligned_cols=102 Identities=10% Similarity=-0.015 Sum_probs=77.6
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
..+.+|||||||+|..+..++++ + .+|+++|+++.+++.|++++..........+++++.+|..+. . .
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-----~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~---~---~ 138 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-----THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD---I---K 138 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-----CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC---C---C
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-----CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH---H---h
Confidence 35679999999999999999876 2 699999999999999999875421000135788887665433 2 4
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+||+|+.+.. ++..+++++.++|||||++++...
T Consensus 139 ~fD~Ii~d~~--------------dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 139 KYDLIFCLQE--------------PDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp CEEEEEESSC--------------CCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hCCEEEECCC--------------ChHHHHHHHHHhcCCCcEEEEEcC
Confidence 7999999831 112489999999999999988654
No 246
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.31 E-value=5.3e-12 Score=109.61 Aligned_cols=108 Identities=18% Similarity=0.087 Sum_probs=72.2
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeC----ChHHHHHHHHHHhhccccccccceEEEec-Chhhh
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDI----QSEALKSTSSLLDKTTSKAEKGLVKLFNM-CHSRM 164 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~----s~~~i~~a~~~~~~~~~~~~~~~v~~~~~-~~~~l 164 (267)
..++++.+|||+|||+|.++..++++ ++|+|||+ ++.+++.+ ..+..+ ..++.++++ +..++
T Consensus 78 ~~~~~g~~VLDlGcG~G~~s~~la~~-------~~V~gvD~~~~~~~~~~~~~--~~~~~~----~~~v~~~~~~D~~~l 144 (305)
T 2p41_A 78 NLVTPEGKVVDLGCGRGGWSYYCGGL-------KNVREVKGLTKGGPGHEEPI--PMSTYG----WNLVRLQSGVDVFFI 144 (305)
T ss_dssp TSSCCCEEEEEETCTTSHHHHHHHTS-------TTEEEEEEECCCSTTSCCCC--CCCSTT----GGGEEEECSCCTTTS
T ss_pred CCCCCCCEEEEEcCCCCHHHHHHHhc-------CCEEEEeccccCchhHHHHH--HhhhcC----CCCeEEEeccccccC
Confidence 34678899999999999999999987 36999999 56544211 111111 257888876 54333
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhh--HHHHHHHHHhcccCCcEEEEEEe
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSET--TKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
. ..+||+|++++... .. ....+. ...+++.+.++|||||.+++..+
T Consensus 145 ---~--~~~fD~V~sd~~~~-~g----~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 145 ---P--PERCDTLLCDIGES-SP----NPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp ---C--CCCCSEEEECCCCC-CS----SHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred ---C--cCCCCEEEECCccc-cC----cchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 2 23799999985431 11 011111 12588999999999999988665
No 247
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.30 E-value=2.9e-11 Score=106.37 Aligned_cols=124 Identities=14% Similarity=0.072 Sum_probs=85.0
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccccc----ccceEEEecChhhhhhcC-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAE----KGLVKLFNMCHSRMEEIV- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~----~~~v~~~~~~~~~l~~~~- 168 (267)
.+.+|||||||+|..+..++++. ..+|++||+++.+++.|++++...+.... ..+++++.+|...+....
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~-----~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~ 262 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK-----PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYA 262 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC-----CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCC-----CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhh
Confidence 46799999999999999998862 37899999999999999999864321001 137999998887654421
Q ss_pred CCCCcEEEEEEeCCCCCCCC-CceeechhhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 169 PKSTAVRLVAFNLGYLPGGD-KSVITTSETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d-~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
..+..||+|+.|++..|... .......+....+++.+.++|+|||++++.....
T Consensus 263 ~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 263 KEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp HHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred ccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 12347999999976544321 1111223334444555599999999998876643
No 248
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.30 E-value=2.6e-11 Score=107.84 Aligned_cols=133 Identities=12% Similarity=0.037 Sum_probs=93.3
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||||||+|..+..+++.+ |+.+++++|+ +.+++.|++ ..+++++.+|..+ ..+ .
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~----p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~D~~~---~~p-~ 259 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHY----PTIKGVNFDL-PHVISEAPQ----------FPGVTHVGGDMFK---EVP-S 259 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC----TTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTT---CCC-C
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHC----CCCeEEEecC-HHHHHhhhh----------cCCeEEEeCCcCC---CCC-C
Confidence 4567899999999999999999985 4589999999 888877654 2578998876543 222 2
Q ss_pred CcEEEEEEeCCCCCCCCCceeech--hhHHHHHHHHHhcccCCcEEEEEEecCCCCC---hhh-------HH--------
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTS--ETTKMALEAAERILIPGGLISMVVYVGHPGG---REE-------LE-------- 231 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---~~~-------~~-------- 231 (267)
. |++++. .++|+. ++..++|+++++.|||||++++.+....... ... ..
T Consensus 260 ~--D~v~~~---------~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g 328 (364)
T 3p9c_A 260 G--DTILMK---------WILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGG 328 (364)
T ss_dssp C--SEEEEE---------SCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSC
T ss_pred C--CEEEeh---------HHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCC
Confidence 2 888776 345432 4567899999999999999999876433211 000 00
Q ss_pred ---HHHHHHHhCCCCceEEEEEeeec
Q 041272 232 ---AVEAFARSLSVDDWICCKFQMLN 254 (267)
Q Consensus 232 ---~~~~~~~~l~~~~~~~~~~~~~~ 254 (267)
...+|.+.+...+|+.++...+.
T Consensus 329 ~~rt~~e~~~ll~~AGF~~v~~~~~~ 354 (364)
T 3p9c_A 329 RERYEREFQALARGAGFTGVKSTYIY 354 (364)
T ss_dssp CCCBHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccCCHHHHHHHHHHCCCceEEEEEcC
Confidence 02345555666788888776654
No 249
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.29 E-value=7.6e-12 Score=111.49 Aligned_cols=100 Identities=14% Similarity=0.156 Sum_probs=78.3
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
++++.+|||||||+|..+..+++..+ ..+++++|+ +.+++.|++ ..+++++.+|..+ .. +
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~----~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~---~~-~- 266 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYP----LIKGINFDL-PQVIENAPP----------LSGIEHVGGDMFA---SV-P- 266 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCT----TCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTT---CC-C-
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCC----CCeEEEeCh-HHHHHhhhh----------cCCCEEEeCCccc---CC-C-
Confidence 45678999999999999999999863 589999999 999987764 2468888866543 12 2
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHH--HHHHHHHhcccCCcEEEEEEec
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTK--MALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~--~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
.+|+|++. .++|+.++.. ++++++.++|||||++++.+..
T Consensus 267 -~~D~v~~~---------~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 267 -QGDAMILK---------AVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp -CEEEEEEE---------SSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -CCCEEEEe---------cccccCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 28999988 3555444444 9999999999999999998653
No 250
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.26 E-value=5e-11 Score=106.72 Aligned_cols=118 Identities=13% Similarity=0.153 Sum_probs=85.9
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCC----------------------------------CCcEEEEEeCChHHHH
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADES----------------------------------SAGCVYGLDIQSEALK 136 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~----------------------------------p~~~v~giD~s~~~i~ 136 (267)
...++.+|||++||+|.+++.+|......- +..+|+|+|+++.+++
T Consensus 192 ~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~ 271 (385)
T 3ldu_A 192 PWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESID 271 (385)
T ss_dssp CCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHH
T ss_pred CCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHH
Confidence 346788999999999999999987632100 1157999999999999
Q ss_pred HHHHHHhhccccccccceEEEecChhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccC--CcE
Q 041272 137 STSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIP--GGL 214 (267)
Q Consensus 137 ~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~Lkp--gG~ 214 (267)
.|++|+..++ ...++++.+.|..++. . ...+|+|++|++|... ........++.+++.+.||+ ||.
T Consensus 272 ~Ar~Na~~~g---l~~~i~~~~~D~~~l~---~-~~~~D~Iv~NPPyg~r-----l~~~~~l~~ly~~lg~~lk~~~g~~ 339 (385)
T 3ldu_A 272 IARENAEIAG---VDEYIEFNVGDATQFK---S-EDEFGFIITNPPYGER-----LEDKDSVKQLYKELGYAFRKLKNWS 339 (385)
T ss_dssp HHHHHHHHHT---CGGGEEEEECCGGGCC---C-SCBSCEEEECCCCCCS-----HHHHHHHHHHHHHHHHHHHTSBSCE
T ss_pred HHHHHHHHcC---CCCceEEEECChhhcC---c-CCCCcEEEECCCCcCc-----cCCHHHHHHHHHHHHHHHhhCCCCE
Confidence 9999999987 4458999987765543 2 2379999999877321 11123445666767667766 888
Q ss_pred EEEEEe
Q 041272 215 ISMVVY 220 (267)
Q Consensus 215 l~i~~~ 220 (267)
+++.+.
T Consensus 340 ~~iit~ 345 (385)
T 3ldu_A 340 YYLITS 345 (385)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 877765
No 251
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.25 E-value=1.4e-11 Score=109.00 Aligned_cols=101 Identities=11% Similarity=0.118 Sum_probs=78.4
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
++++.+|||+|||+|..+..+++.. |+.+++++|+ +.+++.|++ ..+++++.+|..+ ..+
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~----p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~---~~p-- 245 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF----PKLKCIVFDR-PQVVENLSG----------SNNLTYVGGDMFT---SIP-- 245 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC----TTCEEEEEEC-HHHHTTCCC----------BTTEEEEECCTTT---CCC--
T ss_pred cccCceEEEeCCCccHHHHHHHHHC----CCCeEEEeeC-HHHHhhccc----------CCCcEEEeccccC---CCC--
Confidence 5567899999999999999999985 3589999999 999987765 1358888766532 222
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhH--HHHHHHHHhcccC---CcEEEEEEecC
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETT--KMALEAAERILIP---GGLISMVVYVG 222 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~--~~~l~~~~~~Lkp---gG~l~i~~~~~ 222 (267)
.||++++. .++|+.++. .++++++.++||| ||++++.+...
T Consensus 246 -~~D~v~~~---------~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 246 -NADAVLLK---------YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp -CCSEEEEE---------SCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred -CccEEEee---------hhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 38999887 345544444 4999999999999 99999987643
No 252
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.25 E-value=1.3e-10 Score=103.85 Aligned_cols=119 Identities=13% Similarity=0.112 Sum_probs=86.3
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCC----------------------------------CcEEEEEeCChHHH
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESS----------------------------------AGCVYGLDIQSEAL 135 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p----------------------------------~~~v~giD~s~~~i 135 (267)
....++..|||.+||+|.+++.+|.......| ..+|+|+|+++.|+
T Consensus 190 ~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al 269 (384)
T 3ldg_A 190 SNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMV 269 (384)
T ss_dssp TTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHH
T ss_pred hCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHH
Confidence 34567889999999999999999876421001 14699999999999
Q ss_pred HHHHHHHhhccccccccceEEEecChhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccC--Cc
Q 041272 136 KSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIP--GG 213 (267)
Q Consensus 136 ~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~Lkp--gG 213 (267)
+.|++|++.++ ...+++++++|..++. .+ ..||+|++|+||--. +.......++.+++.+.||+ ||
T Consensus 270 ~~Ar~Na~~~g---l~~~I~~~~~D~~~l~---~~-~~fD~Iv~NPPYG~r-----l~~~~~l~~ly~~lg~~lk~~~g~ 337 (384)
T 3ldg_A 270 EIARKNAREVG---LEDVVKLKQMRLQDFK---TN-KINGVLISNPPYGER-----LLDDKAVDILYNEMGETFAPLKTW 337 (384)
T ss_dssp HHHHHHHHHTT---CTTTEEEEECCGGGCC---CC-CCSCEEEECCCCTTT-----TSCHHHHHHHHHHHHHHHTTCTTS
T ss_pred HHHHHHHHHcC---CCCceEEEECChHHCC---cc-CCcCEEEECCchhhc-----cCCHHHHHHHHHHHHHHHhhCCCc
Confidence 99999999988 4557999987775543 22 379999999877211 11123445566666666665 99
Q ss_pred EEEEEEe
Q 041272 214 LISMVVY 220 (267)
Q Consensus 214 ~l~i~~~ 220 (267)
.+++.+.
T Consensus 338 ~~~iit~ 344 (384)
T 3ldg_A 338 SQFILTN 344 (384)
T ss_dssp EEEEEES
T ss_pred EEEEEEC
Confidence 9988765
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.24 E-value=3.1e-11 Score=110.16 Aligned_cols=124 Identities=21% Similarity=0.151 Sum_probs=87.7
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCC---------CCcEEEEEeCChHHHHHHHHHHhhcccccccc-ceEEEecCh
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADES---------SAGCVYGLDIQSEALKSTSSLLDKTTSKAEKG-LVKLFNMCH 161 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~---------p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~-~v~~~~~~~ 161 (267)
..++.+|||.|||+|.++..+++++.... +..+++|+|+++.+++.|+.++..++ ... ++.+++++.
T Consensus 169 ~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g---~~~~~~~i~~gD~ 245 (445)
T 2okc_A 169 PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHG---IGTDRSPIVCEDS 245 (445)
T ss_dssp CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTT---CCSSCCSEEECCT
T ss_pred CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhC---CCcCCCCEeeCCC
Confidence 34678999999999999999988642100 02579999999999999999998776 211 566777654
Q ss_pred hhhhhcCCCCCcEEEEEEeCCCCCCCCCcee--------echhhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 162 SRMEEIVPKSTAVRLVAFNLGYLPGGDKSVI--------TTSETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 162 ~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~--------~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
... .. ...||+|++|+++......... ........+++.+.+.|||||+++++...+
T Consensus 246 l~~---~~-~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 246 LEK---EP-STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDN 310 (445)
T ss_dssp TTS---CC-SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CCC---cc-cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCc
Confidence 322 11 2379999999988544321100 011223578999999999999999988643
No 254
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.24 E-value=8.4e-11 Score=105.46 Aligned_cols=118 Identities=10% Similarity=0.091 Sum_probs=84.2
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCC----------------------------------CcEEEEEeCChHHHH
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESS----------------------------------AGCVYGLDIQSEALK 136 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p----------------------------------~~~v~giD~s~~~i~ 136 (267)
...++..|||++||+|.+++.+|.......| ..+|+|+|+++.|++
T Consensus 198 ~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~ 277 (393)
T 3k0b_A 198 SWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIE 277 (393)
T ss_dssp CCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHH
T ss_pred CCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHH
Confidence 4567889999999999999999876421001 146999999999999
Q ss_pred HHHHHHhhccccccccceEEEecChhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccC--CcE
Q 041272 137 STSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIP--GGL 214 (267)
Q Consensus 137 ~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~Lkp--gG~ 214 (267)
.|++|+..++ ...+++++++|..++. .+ ..||+|++|++|-.. .........+.+++.+.||+ ||.
T Consensus 278 ~Ar~Na~~~g---l~~~I~~~~~D~~~~~---~~-~~fD~Iv~NPPYg~r-----l~~~~~l~~ly~~lg~~lk~~~g~~ 345 (393)
T 3k0b_A 278 IAKQNAVEAG---LGDLITFRQLQVADFQ---TE-DEYGVVVANPPYGER-----LEDEEAVRQLYREMGIVYKRMPTWS 345 (393)
T ss_dssp HHHHHHHHTT---CTTCSEEEECCGGGCC---CC-CCSCEEEECCCCCCS-----HHHHHHHHHHHHHHHHHHHTCTTCE
T ss_pred HHHHHHHHcC---CCCceEEEECChHhCC---CC-CCCCEEEECCCCccc-----cCCchhHHHHHHHHHHHHhcCCCCE
Confidence 9999999988 3457999987775543 22 379999999876221 11123334555555555554 999
Q ss_pred EEEEEe
Q 041272 215 ISMVVY 220 (267)
Q Consensus 215 l~i~~~ 220 (267)
+++.+.
T Consensus 346 ~~iit~ 351 (393)
T 3k0b_A 346 VYVLTS 351 (393)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 888765
No 255
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.24 E-value=7.6e-11 Score=101.32 Aligned_cols=105 Identities=10% Similarity=0.025 Sum_probs=70.9
Q ss_pred hcCCCCEEEEecCCC------ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEE-EecChhh
Q 041272 91 VVRKGDTVVDATCGN------GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKL-FNMCHSR 163 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~------G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~-~~~~~~~ 163 (267)
.++++.+|||+|||+ |. ..+++.++. +++|+|+|+|+. + .++++ +++|..+
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~---~~~V~gvDis~~-v----------------~~v~~~i~gD~~~ 117 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPT---GTLLVDSDLNDF-V----------------SDADSTLIGDCAT 117 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCT---TCEEEEEESSCC-B----------------CSSSEEEESCGGG
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCC---CCEEEEEECCCC-C----------------CCCEEEEECcccc
Confidence 467899999999955 65 556777653 589999999997 1 24667 7766644
Q ss_pred hhhcCCCCCcEEEEEEeCCCCCCCCCcee--echhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 164 MEEIVPKSTAVRLVAFNLGYLPGGDKSVI--TTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 164 l~~~~~~~~~~d~ii~~~~~lp~~d~~~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
+. . ...||+|++|+..-........ .......++++++.++|||||++++..+.
T Consensus 118 ~~---~-~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 118 VH---T-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp CC---C-SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred CC---c-cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 32 2 2479999998532100000001 11234468999999999999999998764
No 256
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.24 E-value=2.2e-11 Score=105.39 Aligned_cols=78 Identities=19% Similarity=0.275 Sum_probs=61.0
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|++++...+ ..+++++.+|..++ ..
T Consensus 39 ~~~~~~~VLDiG~G~G~lt~~La~~------~~~v~~vDi~~~~~~~a~~~~~~~~----~~~v~~~~~D~~~~---~~- 104 (299)
T 2h1r_A 39 KIKSSDIVLEIGCGTGNLTVKLLPL------AKKVITIDIDSRMISEVKKRCLYEG----YNNLEVYEGDAIKT---VF- 104 (299)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHTTT------SSEEEEECSCHHHHHHHHHHHHHTT----CCCEEC----CCSS---CC-
T ss_pred CCCCcCEEEEEcCcCcHHHHHHHhc------CCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEECchhhC---Cc-
Confidence 4567889999999999999999987 3699999999999999999987665 46788887665433 22
Q ss_pred CCcEEEEEEeCCC
Q 041272 171 STAVRLVAFNLGY 183 (267)
Q Consensus 171 ~~~~d~ii~~~~~ 183 (267)
..||.|++|++|
T Consensus 105 -~~~D~Vv~n~py 116 (299)
T 2h1r_A 105 -PKFDVCTANIPY 116 (299)
T ss_dssp -CCCSEEEEECCG
T ss_pred -ccCCEEEEcCCc
Confidence 268999999765
No 257
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.23 E-value=9.2e-13 Score=110.83 Aligned_cols=112 Identities=18% Similarity=0.203 Sum_probs=78.6
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++.. ..+++++++|..++. ...
T Consensus 26 ~~~~~~~VLDiG~G~G~~~~~l~~~------~~~v~~id~~~~~~~~a~~~~~~------~~~v~~~~~D~~~~~--~~~ 91 (245)
T 1yub_A 26 NLKETDTVYEIGTGKGHLTTKLAKI------SKQVTSIELDSHLFNLSSEKLKL------NTRVTLIHQDILQFQ--FPN 91 (245)
T ss_dssp CCCSSEEEEECSCCCSSCSHHHHHH------SSEEEESSSSCSSSSSSSCTTTT------CSEEEECCSCCTTTT--CCC
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHh------CCeEEEEECCHHHHHHHHHHhcc------CCceEEEECChhhcC--ccc
Confidence 4567889999999999999999988 37899999999999999988762 357899887765543 121
Q ss_pred CCcEEEEEEeCCCCCCCCCceee---chhhHHHHH----HHHHhcccCCcEEEEE
Q 041272 171 STAVRLVAFNLGYLPGGDKSVIT---TSETTKMAL----EAAERILIPGGLISMV 218 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~---~~~~~~~~l----~~~~~~LkpgG~l~i~ 218 (267)
+.+| .|++|++|..... .+.+ +......++ +.+.++|||||.+++.
T Consensus 92 ~~~f-~vv~n~Py~~~~~-~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 92 KQRY-KIVGNIPYHLSTQ-IIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp SSEE-EEEEECCSSSCHH-HHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred CCCc-EEEEeCCccccHH-HHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 2468 8899987743210 0000 001112233 6688999999987653
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.22 E-value=1.4e-10 Score=98.13 Aligned_cols=80 Identities=19% Similarity=0.201 Sum_probs=64.1
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh-cCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE-IVP 169 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~-~~~ 169 (267)
.+.++.+|||||||+|.++..+++. +.+|+|+|++++|++.+++++.. ..+++++++|..++.- ...
T Consensus 26 ~~~~~~~VLEIG~G~G~lt~~La~~------~~~V~avEid~~~~~~~~~~~~~------~~~v~~i~~D~~~~~~~~~~ 93 (255)
T 3tqs_A 26 HPQKTDTLVEIGPGRGALTDYLLTE------CDNLALVEIDRDLVAFLQKKYNQ------QKNITIYQNDALQFDFSSVK 93 (255)
T ss_dssp CCCTTCEEEEECCTTTTTHHHHTTT------SSEEEEEECCHHHHHHHHHHHTT------CTTEEEEESCTTTCCGGGSC
T ss_pred CCCCcCEEEEEcccccHHHHHHHHh------CCEEEEEECCHHHHHHHHHHHhh------CCCcEEEEcchHhCCHHHhc
Confidence 4678899999999999999999987 36899999999999999998865 3589999988765421 111
Q ss_pred CCCcEEEEEEeCCC
Q 041272 170 KSTAVRLVAFNLGY 183 (267)
Q Consensus 170 ~~~~~d~ii~~~~~ 183 (267)
.+.++| |++|++|
T Consensus 94 ~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 94 TDKPLR-VVGNLPY 106 (255)
T ss_dssp CSSCEE-EEEECCH
T ss_pred cCCCeE-EEecCCc
Confidence 134677 9999766
No 259
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.22 E-value=5.1e-11 Score=103.04 Aligned_cols=84 Identities=20% Similarity=0.331 Sum_probs=69.2
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||+|||+|.++..+++.++ +++|+|+|+|+.|++.|+++++.++ .++++++++..++...+..
T Consensus 23 ~~~~g~~vLD~g~G~G~~s~~la~~~~----~~~VigvD~d~~al~~A~~~~~~~g-----~~v~~v~~d~~~l~~~l~~ 93 (301)
T 1m6y_A 23 KPEDEKIILDCTVGEGGHSRAILEHCP----GCRIIGIDVDSEVLRIAEEKLKEFS-----DRVSLFKVSYREADFLLKT 93 (301)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCT----TCEEEEEESCHHHHHHHHHHTGGGT-----TTEEEEECCGGGHHHHHHH
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHCC----CCEEEEEECCHHHHHHHHHHHHhcC-----CcEEEEECCHHHHHHHHHh
Confidence 456889999999999999999999863 4799999999999999999998754 5899999988877543211
Q ss_pred --CCcEEEEEEeCCC
Q 041272 171 --STAVRLVAFNLGY 183 (267)
Q Consensus 171 --~~~~d~ii~~~~~ 183 (267)
...||.|++|+++
T Consensus 94 ~g~~~~D~Vl~D~gv 108 (301)
T 1m6y_A 94 LGIEKVDGILMDLGV 108 (301)
T ss_dssp TTCSCEEEEEEECSC
T ss_pred cCCCCCCEEEEcCcc
Confidence 1369999998764
No 260
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.21 E-value=1.7e-11 Score=103.95 Aligned_cols=118 Identities=13% Similarity=0.111 Sum_probs=80.2
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCCh-------HHHHHHHHHHhhccccccccceEEEecChhhh
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQS-------EALKSTSSLLDKTTSKAEKGLVKLFNMCHSRM 164 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~-------~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l 164 (267)
+.++.+|||+|||+|.+++.+|+. +++|+|+|+|+ ++++.|++|++.++ ...++++++++..++
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~------g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~---~~~ri~~~~~d~~~~ 151 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL------GLTVTAFEQHPAVACLLSDGIRRALLNPETQD---TAARINLHFGNAAEQ 151 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT------TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHH---HHTTEEEEESCHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh------CCEEEEEECChhhhHHHHHHHHHHHhHHHhhC---CccCeEEEECCHHHH
Confidence 446789999999999999999986 36899999999 99999999988776 335599999888775
Q ss_pred hhcCCC-CCcEEEEEEeCCCCCCCCCce----e-------echhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 165 EEIVPK-STAVRLVAFNLGYLPGGDKSV----I-------TTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 165 ~~~~~~-~~~~d~ii~~~~~lp~~d~~~----~-------~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
...... ..+||+|++|+++.+...... . ....+..++++.+.++.+. ++++-..
T Consensus 152 l~~~~~~~~~fD~V~~dP~~~~~~~sa~vkk~~~~l~~l~~~~~d~~~ll~~a~~~~~~--~vvvk~p 217 (258)
T 2r6z_A 152 MPALVKTQGKPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAKK--RVVVKRP 217 (258)
T ss_dssp HHHHHHHHCCCSEEEECCCC-------------HHHHHHHSHHHHHHHHHHHHHHHCSS--EEEEEEE
T ss_pred HHhhhccCCCccEEEECCCCCCcccchHHHHHHHHhhhhcCCCccHHHHHHHHHHhcCc--EEEEEcC
Confidence 432211 036999999987743321100 0 0123456677777777543 4444333
No 261
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=99.19 E-value=1.8e-10 Score=99.82 Aligned_cols=82 Identities=18% Similarity=0.329 Sum_probs=69.0
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+++|+.++|..||.|..+..+++.+++ .++|+|+|.++.+++.|+ ++. ..++++++++..++...+..
T Consensus 54 ~i~pggiyVD~TlG~GGHS~~iL~~lg~---~GrVig~D~Dp~Al~~A~-rL~-------~~Rv~lv~~nF~~l~~~L~~ 122 (347)
T 3tka_A 54 NIRPDGIYIDGTFGRGGHSRLILSQLGE---EGRLLAIDRDPQAIAVAK-TID-------DPRFSIIHGPFSALGEYVAE 122 (347)
T ss_dssp CCCTTCEEEESCCTTSHHHHHHHTTCCT---TCEEEEEESCHHHHHHHT-TCC-------CTTEEEEESCGGGHHHHHHH
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHhCCC---CCEEEEEECCHHHHHHHH-hhc-------CCcEEEEeCCHHHHHHHHHh
Confidence 4678999999999999999999998865 689999999999999994 441 36899999999988775533
Q ss_pred C---CcEEEEEEeCCC
Q 041272 171 S---TAVRLVAFNLGY 183 (267)
Q Consensus 171 ~---~~~d~ii~~~~~ 183 (267)
. ..+|.|++|+|+
T Consensus 123 ~g~~~~vDgILfDLGV 138 (347)
T 3tka_A 123 RDLIGKIDGILLDLGV 138 (347)
T ss_dssp TTCTTCEEEEEEECSC
T ss_pred cCCCCcccEEEECCcc
Confidence 2 269999999988
No 262
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.19 E-value=7.2e-11 Score=101.80 Aligned_cols=78 Identities=21% Similarity=0.190 Sum_probs=64.5
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++++|||||||+|.++..+++. +.+|+|||+++.+++.+++++.. ..+++++++|..++. .+
T Consensus 47 ~~~~~~~VLEIG~G~G~lT~~La~~------~~~V~aVEid~~li~~a~~~~~~------~~~v~vi~gD~l~~~---~~ 111 (295)
T 3gru_A 47 NLTKDDVVLEIGLGKGILTEELAKN------AKKVYVIEIDKSLEPYANKLKEL------YNNIEIIWGDALKVD---LN 111 (295)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH------SSEEEEEESCGGGHHHHHHHHHH------CSSEEEEESCTTTSC---GG
T ss_pred CCCCcCEEEEECCCchHHHHHHHhc------CCEEEEEECCHHHHHHHHHHhcc------CCCeEEEECchhhCC---cc
Confidence 4678899999999999999999998 37999999999999999999874 368999987765432 12
Q ss_pred CCcEEEEEEeCCC
Q 041272 171 STAVRLVAFNLGY 183 (267)
Q Consensus 171 ~~~~d~ii~~~~~ 183 (267)
+..||.|++|++|
T Consensus 112 ~~~fD~Iv~NlPy 124 (295)
T 3gru_A 112 KLDFNKVVANLPY 124 (295)
T ss_dssp GSCCSEEEEECCG
T ss_pred cCCccEEEEeCcc
Confidence 2358999999765
No 263
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.17 E-value=4.6e-10 Score=94.24 Aligned_cols=78 Identities=19% Similarity=0.260 Sum_probs=61.6
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++.. ..+++++++|..++.- ..
T Consensus 27 ~~~~~~~VLDiG~G~G~lt~~l~~~------~~~v~~vD~~~~~~~~a~~~~~~------~~~v~~~~~D~~~~~~--~~ 92 (244)
T 1qam_A 27 RLNEHDNIFEIGSGKGHFTLELVQR------CNFVTAIEIDHKLCKTTENKLVD------HDNFQVLNKDILQFKF--PK 92 (244)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHH------SSEEEEECSCHHHHHHHHHHTTT------CCSEEEECCCGGGCCC--CS
T ss_pred CCCCCCEEEEEeCCchHHHHHHHHc------CCeEEEEECCHHHHHHHHHhhcc------CCCeEEEEChHHhCCc--cc
Confidence 3567889999999999999999998 37899999999999999998864 2578999877655421 11
Q ss_pred CCcEEEEEEeCCC
Q 041272 171 STAVRLVAFNLGY 183 (267)
Q Consensus 171 ~~~~d~ii~~~~~ 183 (267)
+.++ .+++|++|
T Consensus 93 ~~~~-~vv~nlPy 104 (244)
T 1qam_A 93 NQSY-KIFGNIPY 104 (244)
T ss_dssp SCCC-EEEEECCG
T ss_pred CCCe-EEEEeCCc
Confidence 2345 68888766
No 264
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.15 E-value=7.2e-11 Score=105.91 Aligned_cols=84 Identities=15% Similarity=0.148 Sum_probs=67.9
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhc--cccccccceEEEecChhhhhhcC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKT--TSKAEKGLVKLFNMCHSRMEEIV 168 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~ 168 (267)
.+.+|.+|||+|||+|..++.+++. +.+|+|+|+|+.+++.|++|++.+ + ..+++++++|..+.....
T Consensus 90 ~l~~g~~VLDLgcG~G~~al~LA~~------g~~V~~VD~s~~~l~~Ar~N~~~~~~g----l~~i~~i~~Da~~~L~~~ 159 (410)
T 3ll7_A 90 FIREGTKVVDLTGGLGIDFIALMSK------ASQGIYIERNDETAVAARHNIPLLLNE----GKDVNILTGDFKEYLPLI 159 (410)
T ss_dssp GSCTTCEEEESSCSSSHHHHHHHTT------CSEEEEEESCHHHHHHHHHHHHHHSCT----TCEEEEEESCGGGSHHHH
T ss_pred hcCCCCEEEEeCCCchHHHHHHHhc------CCEEEEEECCHHHHHHHHHhHHHhccC----CCcEEEEECcHHHhhhhc
Confidence 3456899999999999999999987 479999999999999999999987 6 368999998877642221
Q ss_pred CCCCcEEEEEEeCCCCC
Q 041272 169 PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp 185 (267)
++..||+|++|+++-.
T Consensus 160 -~~~~fDvV~lDPPrr~ 175 (410)
T 3ll7_A 160 -KTFHPDYIYVDPARRS 175 (410)
T ss_dssp -HHHCCSEEEECCEEC-
T ss_pred -cCCCceEEEECCCCcC
Confidence 1236999999987754
No 265
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.14 E-value=7.5e-11 Score=104.44 Aligned_cols=101 Identities=10% Similarity=0.072 Sum_probs=77.6
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+.++.+|||||||+|.++..+++..+ +.+++++|+ +.+++.|++ ..+++++.++..+ .. +
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~---~~-~- 250 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFP----HLKCTVFDQ-PQVVGNLTG----------NENLNFVGGDMFK---SI-P- 250 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCT----TSEEEEEEC-HHHHSSCCC----------CSSEEEEECCTTT---CC-C-
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCC----CCeEEEecc-HHHHhhccc----------CCCcEEEeCccCC---CC-C-
Confidence 35678999999999999999999863 589999999 788876654 2458888766543 12 2
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhH--HHHHHHHHhcccC---CcEEEEEEecC
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETT--KMALEAAERILIP---GGLISMVVYVG 222 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~--~~~l~~~~~~Lkp---gG~l~i~~~~~ 222 (267)
.+|++++. .++|+.++. .++++++.++||| ||++++.+...
T Consensus 251 -~~D~v~~~---------~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 251 -SADAVLLK---------WVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp -CCSEEEEE---------SCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred -CceEEEEc---------ccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 48999888 355544443 4999999999999 99999987643
No 266
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.14 E-value=7.6e-10 Score=106.17 Aligned_cols=124 Identities=13% Similarity=0.087 Sum_probs=84.4
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCC--------------------------------------CCcEEEEEeCCh
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADES--------------------------------------SAGCVYGLDIQS 132 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~--------------------------------------p~~~v~giD~s~ 132 (267)
...++..|||.+||+|.+++.+|......- +..+|+|+|+++
T Consensus 187 ~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~ 266 (703)
T 3v97_A 187 GWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDA 266 (703)
T ss_dssp TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCH
T ss_pred CCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCH
Confidence 346788999999999999999887531000 125799999999
Q ss_pred HHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCC
Q 041272 133 EALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPG 212 (267)
Q Consensus 133 ~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~Lkpg 212 (267)
.|++.|++|+..++ +...+++.++|..++.... ....+|+|++|+||=-.. .-.......-+.+.++.+.+.||
T Consensus 267 ~av~~A~~N~~~ag---v~~~i~~~~~D~~~~~~~~-~~~~~d~Iv~NPPYG~Rl--g~~~~l~~ly~~l~~~lk~~~~g 340 (703)
T 3v97_A 267 RVIQRARTNARLAG---IGELITFEVKDVAQLTNPL-PKGPYGTVLSNPPYGERL--DSEPALIALHSLLGRIMKNQFGG 340 (703)
T ss_dssp HHHHHHHHHHHHTT---CGGGEEEEECCGGGCCCSC-TTCCCCEEEECCCCCC-----CCHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcC---CCCceEEEECChhhCcccc-ccCCCCEEEeCCCccccc--cchhHHHHHHHHHHHHHHhhCCC
Confidence 99999999999988 4566899988776643221 122699999998871100 00001122233455566666799
Q ss_pred cEEEEEEe
Q 041272 213 GLISMVVY 220 (267)
Q Consensus 213 G~l~i~~~ 220 (267)
|.+++.+.
T Consensus 341 ~~~~ilt~ 348 (703)
T 3v97_A 341 WNLSLFSA 348 (703)
T ss_dssp CEEEEEES
T ss_pred CeEEEEeC
Confidence 99988653
No 267
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.14 E-value=6.8e-10 Score=103.31 Aligned_cols=127 Identities=17% Similarity=0.101 Sum_probs=89.7
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.++.+|||.+||+|.+...+++++.. .+...++|+|+++.+++.|+.|+..++. ...++.+.++|.....-......
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~-~~~~~i~G~Eid~~~~~lA~~Nl~l~gi--~~~~~~I~~gDtL~~d~p~~~~~ 296 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQ-PQTVVYFGQELNTSTYNLARMNMILHGV--PIENQFLHNADTLDEDWPTQEPT 296 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSC-TTTCEEEEEESCHHHHHHHHHHHHHTTC--CGGGEEEEESCTTTSCSCCSSCC
T ss_pred CCCCEEeecccchhHHHHHHHHHHHh-ccCceEEEEECcHHHHHHHHHHHHHcCC--CcCccceEecceecccccccccc
Confidence 36789999999999999999988642 1246899999999999999999987771 11467777766432210011235
Q ss_pred cEEEEEEeCCCCCCCCCc--eee------------chhhHHHHHHHHHhccc-CCcEEEEEEecC
Q 041272 173 AVRLVAFNLGYLPGGDKS--VIT------------TSETTKMALEAAERILI-PGGLISMVVYVG 222 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~--~~~------------~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~ 222 (267)
.||+|++|+||...+... ... .......++..+.+.|| |||++.++.+.+
T Consensus 297 ~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 297 NFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp CBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred cccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 799999999996443211 000 01112368999999999 999999988754
No 268
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.14 E-value=4.2e-10 Score=104.93 Aligned_cols=125 Identities=14% Similarity=0.058 Sum_probs=88.2
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCC--------------CcEEEEEeCChHHHHHHHHHHhhccccccccc----
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESS--------------AGCVYGLDIQSEALKSTSSLLDKTTSKAEKGL---- 153 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p--------------~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~---- 153 (267)
..++.+|||.+||+|.++..+++.+....+ ..+++|+|+++.+++.|+.++..++ ...
T Consensus 167 p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~g----i~~~~~~ 242 (541)
T 2ar0_A 167 PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHD----IEGNLDH 242 (541)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTT----CCCBGGG
T ss_pred cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhC----CCccccc
Confidence 356789999999999999999887532110 1379999999999999999998766 222
Q ss_pred -eEEEecChhhhhhcCCCCCcEEEEEEeCCCCCCCCCc----ee-echhhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 154 -VKLFNMCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKS----VI-TTSETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 154 -v~~~~~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~----~~-~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
+.+++++....... ....||+|++|+||....... +. ........++..+.+.|||||++++++..+
T Consensus 243 ~~~I~~gDtL~~~~~--~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 243 GGAIRLGNTLGSDGE--NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp TBSEEESCTTSHHHH--TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred cCCeEeCCCcccccc--cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 66777665332211 124799999999885443211 00 011223478999999999999999988754
No 269
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.13 E-value=9.6e-11 Score=99.08 Aligned_cols=84 Identities=15% Similarity=0.159 Sum_probs=64.5
Q ss_pred cCCC--CEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccc----c-cccceEEEecChhhh
Q 041272 92 VRKG--DTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSK----A-EKGLVKLFNMCHSRM 164 (267)
Q Consensus 92 l~~~--~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~----~-~~~~v~~~~~~~~~l 164 (267)
++++ .+|||+|||+|..++.+|++ +++|++||+++.+++.++++++....+ . ...++++++++..++
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~------g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~ 157 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASV------GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTA 157 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHH------TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHH
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHH
Confidence 4567 89999999999999999997 368999999999877777776543210 1 125799999888776
Q ss_pred hhcCCCCCcEEEEEEeCCC
Q 041272 165 EEIVPKSTAVRLVAFNLGY 183 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~ 183 (267)
...... .||+|++|++|
T Consensus 158 L~~~~~--~fDvV~lDP~y 174 (258)
T 2oyr_A 158 LTDITP--RPQVVYLDPMF 174 (258)
T ss_dssp STTCSS--CCSEEEECCCC
T ss_pred HHhCcc--cCCEEEEcCCC
Confidence 443332 59999999887
No 270
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.12 E-value=3.4e-11 Score=95.66 Aligned_cols=95 Identities=14% Similarity=0.104 Sum_probs=70.3
Q ss_pred hhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcC
Q 041272 89 KHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIV 168 (267)
Q Consensus 89 ~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 168 (267)
...+++|.+|||+|||+ + ++|+|+.|++.|+++... ++++++++..++....
T Consensus 7 ~~g~~~g~~vL~~~~g~----------v----------~vD~s~~ml~~a~~~~~~--------~~~~~~~d~~~~~~~~ 58 (176)
T 2ld4_A 7 DFGISAGQFVAVVWDKS----------S----------PVEALKGLVDKLQALTGN--------EGRVSVENIKQLLQSA 58 (176)
T ss_dssp TTTCCTTSEEEEEECTT----------S----------CHHHHHHHHHHHHHHTTT--------TSEEEEEEGGGGGGGC
T ss_pred ccCCCCCCEEEEecCCc----------e----------eeeCCHHHHHHHHHhccc--------CcEEEEechhcCcccc
Confidence 33578999999999985 1 299999999999987532 4777777766554321
Q ss_pred CCCCcEEEEEEeCCCCCCCCCceeech-hhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 169 PKSTAVRLVAFNLGYLPGGDKSVITTS-ETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.++.+||+|+++. ++++. ++..+++++++++|||||++++...
T Consensus 59 ~~~~~fD~V~~~~---------~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 59 HKESSFDIILSGL---------VPGSTTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp CCSSCEEEEEECC---------STTCCCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCEeEEEECC---------hhhhcccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 2455899999873 22222 3447999999999999999998654
No 271
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.08 E-value=3.7e-10 Score=96.19 Aligned_cols=77 Identities=18% Similarity=0.042 Sum_probs=62.4
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++ +|||||||+|.++..+++. +.+|+|+|+++.|++.+++++.. .+++++++|..++.-. .
T Consensus 44 ~~~~~-~VLEIG~G~G~lt~~L~~~------~~~V~avEid~~~~~~l~~~~~~-------~~v~vi~~D~l~~~~~--~ 107 (271)
T 3fut_A 44 RPFTG-PVFEVGPGLGALTRALLEA------GAEVTAIEKDLRLRPVLEETLSG-------LPVRLVFQDALLYPWE--E 107 (271)
T ss_dssp CCCCS-CEEEECCTTSHHHHHHHHT------TCCEEEEESCGGGHHHHHHHTTT-------SSEEEEESCGGGSCGG--G
T ss_pred CCCCC-eEEEEeCchHHHHHHHHHc------CCEEEEEECCHHHHHHHHHhcCC-------CCEEEEECChhhCChh--h
Confidence 46778 9999999999999999997 36899999999999999998763 4789998877554221 1
Q ss_pred CCcEEEEEEeCCC
Q 041272 171 STAVRLVAFNLGY 183 (267)
Q Consensus 171 ~~~~d~ii~~~~~ 183 (267)
...+|.|++|++|
T Consensus 108 ~~~~~~iv~NlPy 120 (271)
T 3fut_A 108 VPQGSLLVANLPY 120 (271)
T ss_dssp SCTTEEEEEEECS
T ss_pred ccCccEEEecCcc
Confidence 1257999999877
No 272
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.08 E-value=7.3e-10 Score=90.05 Aligned_cols=103 Identities=7% Similarity=-0.021 Sum_probs=77.7
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccccc--ccceEEEecChhhh----
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAE--KGLVKLFNMCHSRM---- 164 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~--~~~v~~~~~~~~~l---- 164 (267)
.+.+..+|||+|| |+.|+.+|+.. +++|++||.+++..+.|++++++.+ . ..+++++.++....
T Consensus 27 ~l~~a~~VLEiGt--GySTl~lA~~~-----~g~VvtvE~d~~~~~~ar~~l~~~g---~~~~~~I~~~~gda~~~~~wg 96 (202)
T 3cvo_A 27 AYEEAEVILEYGS--GGSTVVAAELP-----GKHVTSVESDRAWARMMKAWLAANP---PAEGTEVNIVWTDIGPTGDWG 96 (202)
T ss_dssp HHHHCSEEEEESC--SHHHHHHHTST-----TCEEEEEESCHHHHHHHHHHHHHSC---CCTTCEEEEEECCCSSBCGGG
T ss_pred HhhCCCEEEEECc--hHHHHHHHHcC-----CCEEEEEeCCHHHHHHHHHHHHHcC---CCCCCceEEEEeCchhhhccc
Confidence 4556789999998 58899999842 4899999999999999999999877 4 56899988775322
Q ss_pred -----------hhc------CCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEE
Q 041272 165 -----------EEI------VPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISM 217 (267)
Q Consensus 165 -----------~~~------~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 217 (267)
..+ .....+||+|+.+- ......+..+.++|+|||++++
T Consensus 97 ~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg--------------~k~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 97 HPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDG--------------RFRVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp CBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECS--------------SSHHHHHHHHHHHCSSCEEEEE
T ss_pred ccccchhhhhHHHHhhhhhccccCCCCCEEEEeC--------------CCchhHHHHHHHhcCCCeEEEE
Confidence 111 11235799999983 1113667778899999999955
No 273
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=99.08 E-value=1.5e-09 Score=103.64 Aligned_cols=128 Identities=14% Similarity=0.136 Sum_probs=83.3
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHH--HHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKST--SSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a--~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
.+++.+|||.|||+|.++..++++++. ....+++|+|+++.+++.| +.++..+....-.....+..++..+... .
T Consensus 319 l~~g~rVLDPaCGSG~FLIaaA~~l~e-i~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~--~ 395 (878)
T 3s1s_A 319 LTEDEVISDPAAGSGNLLATVSAGFNN-VMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNP--E 395 (878)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTSTT-CCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCG--G
T ss_pred CCCCCEEEECCCCccHHHHHHHHHhcc-cCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccc--c
Confidence 346889999999999999999988642 0136899999999999999 5555442200001222344433322111 1
Q ss_pred CCCcEEEEEEeCCCCCCCCCceee--------------------chhhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVIT--------------------TSETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~--------------------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
....||+|++|+||.......-.. .......+++.+.+.|+|||+++++.+.+
T Consensus 396 ~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 396 DFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp GGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred ccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 124799999999995432211100 01124568899999999999999988754
No 274
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.08 E-value=1.3e-09 Score=96.26 Aligned_cols=128 Identities=14% Similarity=0.150 Sum_probs=93.4
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccc--cccceEEEecChhhhhhcC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKA--EKGLVKLFNMCHSRMEEIV 168 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~--~~~~v~~~~~~~~~l~~~~ 168 (267)
.+++|++|||+++|+|.-|..+|+... ++.|+++|+++..++..++++++.+... ...++.+...|...+....
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~----~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~ 220 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGC----CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELE 220 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTC----EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHS
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcC----CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhc
Confidence 467899999999999999999998753 4789999999999999999998865211 1257888887776665544
Q ss_pred CCCCcEEEEEEeCCCCC------CCCCcee-e--------chhhHHHHHHHHHhcccCCcEEEEEEecCCC
Q 041272 169 PKSTAVRLVAFNLGYLP------GGDKSVI-T--------TSETTKMALEAAERILIPGGLISMVVYVGHP 224 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp------~~d~~~~-~--------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 224 (267)
. ..||.|+.|.+.-- ..+.... . ......++|..+.++|||||+|+.+++.-.+
T Consensus 221 ~--~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 221 G--DTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp T--TCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred c--ccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 3 36999999976411 1111111 1 1123467899999999999999888774433
No 275
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.03 E-value=8.1e-10 Score=102.95 Aligned_cols=122 Identities=15% Similarity=0.013 Sum_probs=82.0
Q ss_pred CEEEEecCCCChHHHHHHHhcCCCCC-----------CcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhh
Q 041272 96 DTVVDATCGNGYDTLMMLKMVADESS-----------AGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRM 164 (267)
Q Consensus 96 ~~VLDlGcG~G~~~~~la~~~~~~~p-----------~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l 164 (267)
.+|||.+||+|.+...+++.+....+ ...++|+|+++.+++.|+.|+..++ ...++.+.+++..
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g---i~~~i~i~~gDtL-- 320 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG---IDFNFGKKNADSF-- 320 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT---CCCBCCSSSCCTT--
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC---CCcccceeccchh--
Confidence 39999999999999888765420000 2589999999999999999998876 2333433444432
Q ss_pred hhcCCCCCcEEEEEEeCCCCCC-CCCce-------e----------e--chhhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPG-GDKSV-------I----------T--TSETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~-~d~~~-------~----------~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
.........||+|++|+||... +.... . . .......+++.+.+.|||||++.++...+
T Consensus 321 ~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 321 LDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp TSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred cCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 1111223579999999998542 21110 0 0 01112368999999999999999988744
No 276
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.00 E-value=4.1e-09 Score=90.15 Aligned_cols=83 Identities=14% Similarity=0.140 Sum_probs=61.5
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhh--hhcC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRM--EEIV 168 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l--~~~~ 168 (267)
.+.++.+|||||||+|.++..+++.... .+++|+|+|+++.|++.++++. . .+++++++|..++ .+..
T Consensus 39 ~~~~~~~VLEIG~G~G~lt~~La~~~~~--~~~~V~avDid~~~l~~a~~~~---~-----~~v~~i~~D~~~~~~~~~~ 108 (279)
T 3uzu_A 39 RPERGERMVEIGPGLGALTGPVIARLAT--PGSPLHAVELDRDLIGRLEQRF---G-----ELLELHAGDALTFDFGSIA 108 (279)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHHHHHCB--TTBCEEEEECCHHHHHHHHHHH---G-----GGEEEEESCGGGCCGGGGS
T ss_pred CCCCcCEEEEEccccHHHHHHHHHhCCC--cCCeEEEEECCHHHHHHHHHhc---C-----CCcEEEECChhcCChhHhc
Confidence 4678899999999999999999988421 0134999999999999999983 2 4789998887654 2222
Q ss_pred CCC-CcEEEEEEeCCC
Q 041272 169 PKS-TAVRLVAFNLGY 183 (267)
Q Consensus 169 ~~~-~~~d~ii~~~~~ 183 (267)
.+. ...+.|++|++|
T Consensus 109 ~~~~~~~~~vv~NlPY 124 (279)
T 3uzu_A 109 RPGDEPSLRIIGNLPY 124 (279)
T ss_dssp CSSSSCCEEEEEECCH
T ss_pred ccccCCceEEEEccCc
Confidence 111 134679999766
No 277
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.96 E-value=4.2e-09 Score=88.65 Aligned_cols=78 Identities=22% Similarity=0.295 Sum_probs=59.8
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+.++.+|||+|||+|.++..+++. + ..+|+|+|+++.+++.++++ . ..+++++++|..++.-....
T Consensus 28 ~~~~~~~VLDiG~G~G~lt~~L~~~-~----~~~v~avEid~~~~~~~~~~-~-------~~~v~~i~~D~~~~~~~~~~ 94 (249)
T 3ftd_A 28 NIEEGNTVVEVGGGTGNLTKVLLQH-P----LKKLYVIELDREMVENLKSI-G-------DERLEVINEDASKFPFCSLG 94 (249)
T ss_dssp TCCTTCEEEEEESCHHHHHHHHTTS-C----CSEEEEECCCHHHHHHHTTS-C-------CTTEEEECSCTTTCCGGGSC
T ss_pred CCCCcCEEEEEcCchHHHHHHHHHc-C----CCeEEEEECCHHHHHHHHhc-c-------CCCeEEEEcchhhCChhHcc
Confidence 4567889999999999999999987 2 37999999999999999987 2 25789998877544211101
Q ss_pred CCcEEEEEEeCCC
Q 041272 171 STAVRLVAFNLGY 183 (267)
Q Consensus 171 ~~~~d~ii~~~~~ 183 (267)
+ ++ .+++|++|
T Consensus 95 ~-~~-~vv~NlPy 105 (249)
T 3ftd_A 95 K-EL-KVVGNLPY 105 (249)
T ss_dssp S-SE-EEEEECCT
T ss_pred C-Cc-EEEEECch
Confidence 1 34 88999876
No 278
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.95 E-value=9e-10 Score=92.91 Aligned_cols=81 Identities=14% Similarity=0.029 Sum_probs=59.7
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhh--hhcC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRM--EEIV 168 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l--~~~~ 168 (267)
.+.++++|||||||+|.++. +++ .+ ..+|+|+|+++.|++.+++++.. ..+++++++|..++ .+..
T Consensus 18 ~~~~~~~VLEIG~G~G~lt~-l~~-~~----~~~v~avEid~~~~~~a~~~~~~------~~~v~~i~~D~~~~~~~~~~ 85 (252)
T 1qyr_A 18 NPQKGQAMVEIGPGLAALTE-PVG-ER----LDQLTVIELDRDLAARLQTHPFL------GPKLTIYQQDAMTFNFGELA 85 (252)
T ss_dssp CCCTTCCEEEECCTTTTTHH-HHH-TT----CSCEEEECCCHHHHHHHHTCTTT------GGGEEEECSCGGGCCHHHHH
T ss_pred CCCCcCEEEEECCCCcHHHH-hhh-CC----CCeEEEEECCHHHHHHHHHHhcc------CCceEEEECchhhCCHHHhh
Confidence 46788899999999999999 654 21 12399999999999999998764 24799998887653 2221
Q ss_pred CCCCcEEEEEEeCCC
Q 041272 169 PKSTAVRLVAFNLGY 183 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~ 183 (267)
......+.|++|++|
T Consensus 86 ~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 86 EKMGQPLRVFGNLPY 100 (252)
T ss_dssp HHHTSCEEEEEECCT
T ss_pred cccCCceEEEECCCC
Confidence 000135899999877
No 279
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.90 E-value=4.8e-08 Score=83.41 Aligned_cols=130 Identities=12% Similarity=0.071 Sum_probs=95.2
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCC-CCCcEEEEEeCChH--------------------------HHHHHHHHHhhcc
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADE-SSAGCVYGLDIQSE--------------------------ALKSTSSLLDKTT 146 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~-~p~~~v~giD~s~~--------------------------~i~~a~~~~~~~~ 146 (267)
..+.|||+|+..|+.++.+|..+... .++.+|+++|..+. .++.+++++++.+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 34699999999999999998765310 02578999996531 4778899998877
Q ss_pred cccc-ccceEEEecChhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCC
Q 041272 147 SKAE-KGLVKLFNMCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPG 225 (267)
Q Consensus 147 ~~~~-~~~v~~~~~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 225 (267)
. ..+++++.++..+...... ..++|++..|. . .......+++.++..|+|||++++-++ ..
T Consensus 186 ---l~~~~I~li~Gda~etL~~~~-~~~~d~vfIDa----------D-~y~~~~~~Le~~~p~L~pGGiIv~DD~-~~-- 247 (282)
T 2wk1_A 186 ---LLDEQVRFLPGWFKDTLPTAP-IDTLAVLRMDG----------D-LYESTWDTLTNLYPKVSVGGYVIVDDY-MM-- 247 (282)
T ss_dssp ---CCSTTEEEEESCHHHHSTTCC-CCCEEEEEECC----------C-SHHHHHHHHHHHGGGEEEEEEEEESSC-TT--
T ss_pred ---CCcCceEEEEeCHHHHHhhCC-CCCEEEEEEcC----------C-ccccHHHHHHHHHhhcCCCEEEEEcCC-CC--
Confidence 3 3789999988865433332 34799999983 1 234456889999999999999987665 22
Q ss_pred ChhhHHHHHHHHHhCC
Q 041272 226 GREELEAVEAFARSLS 241 (267)
Q Consensus 226 ~~~~~~~~~~~~~~l~ 241 (267)
.....+++.+|.+..+
T Consensus 248 ~~G~~~Av~Ef~~~~~ 263 (282)
T 2wk1_A 248 CPPCKDAVDEYRAKFD 263 (282)
T ss_dssp CHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhcC
Confidence 2445778888888765
No 280
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.86 E-value=7e-09 Score=87.35 Aligned_cols=115 Identities=15% Similarity=0.182 Sum_probs=69.9
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
..++++.+|||||||+|.++..+++..+ ...|+|+|+...+....... ...+ .++..+..+. +...+
T Consensus 70 ~~l~~~~~VLDLGaAPGGWSQvAa~~~~----~~~v~g~dVGvDl~~~pi~~-~~~g-----~~ii~~~~~~-dv~~l-- 136 (277)
T 3evf_A 70 GYVKLEGRVIDLGCGRGGWCYYAAAQKE----VSGVKGFTLGRDGHEKPMNV-QSLG-----WNIITFKDKT-DIHRL-- 136 (277)
T ss_dssp TSSCCCEEEEEETCTTCHHHHHHHTSTT----EEEEEEECCCCTTCCCCCCC-CBTT-----GGGEEEECSC-CTTTS--
T ss_pred CCCCCCCEEEEecCCCCHHHHHHHHhcC----CCcceeEEEeccCccccccc-CcCC-----CCeEEEeccc-eehhc--
Confidence 4578889999999999999999997643 36788999885431111000 0001 1333343332 22222
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCC-cEEEEEEe
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPG-GLISMVVY 220 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 220 (267)
.+..+|+|++|+..- .....+ ........++.+.++|||| |.+++-.+
T Consensus 137 ~~~~~DlVlsD~apn-sG~~~~--D~~rs~~LL~~a~~~LkpG~G~FV~KVf 185 (277)
T 3evf_A 137 EPVKCDTLLCDIGES-SSSSVT--EGERTVRVLDTVEKWLACGVDNFCVKVL 185 (277)
T ss_dssp CCCCCSEEEECCCCC-CSCHHH--HHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred CCCCccEEEecCccC-cCchHH--HHHHHHHHHHHHHHHhCCCCCeEEEEec
Confidence 234799999996331 111111 1111223578889999999 99999887
No 281
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.85 E-value=1.6e-07 Score=80.41 Aligned_cols=117 Identities=15% Similarity=0.088 Sum_probs=85.5
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccc-cccccceEEEecChhhhhhcCCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTS-KAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~-~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+...+||-||-|.|..+..+++..+ ..+|+.||+++..++.|++.+..... ....++++++.+|....... ..
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~----v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~--~~ 155 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKN----VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ--TS 155 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTT----CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC--SS
T ss_pred CCCCeEEEECCCchHHHHHHHHcCC----cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh--cc
Confidence 4557999999999999999998743 37999999999999999998754211 11247899998877655433 23
Q ss_pred CcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 172 TAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 172 ~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
..||+|+.+...-...... -...++++.+.+.|+|||+++....
T Consensus 156 ~~yDvIi~D~~dp~~~~~~-----L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 156 QTFDVIISDCTDPIGPGES-----LFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp CCEEEEEESCCCCCCTTCC-----SSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccCCEEEEeCCCcCCCchh-----hcCHHHHHHHHHHhCCCCEEEEecC
Confidence 4799999996431111111 1125799999999999999987543
No 282
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.84 E-value=1.2e-08 Score=86.38 Aligned_cols=79 Identities=25% Similarity=0.289 Sum_probs=66.7
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+++++.+||.+||.|..+..+++. +++|+|+|.++.+++.|++ +.. .++++++++..++...+..
T Consensus 19 ~~~~gg~~VD~T~G~GGHS~~il~~------~g~VigiD~Dp~Ai~~A~~-L~~-------~rv~lv~~~f~~l~~~L~~ 84 (285)
T 1wg8_A 19 AVRPGGVYVDATLGGAGHARGILER------GGRVIGLDQDPEAVARAKG-LHL-------PGLTVVQGNFRHLKRHLAA 84 (285)
T ss_dssp TCCTTCEEEETTCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHH-TCC-------TTEEEEESCGGGHHHHHHH
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHC------CCEEEEEeCCHHHHHHHHh-hcc-------CCEEEEECCcchHHHHHHH
Confidence 4678999999999999999999997 3799999999999999998 643 4899999999988664322
Q ss_pred --CCcEEEEEEeCCC
Q 041272 171 --STAVRLVAFNLGY 183 (267)
Q Consensus 171 --~~~~d~ii~~~~~ 183 (267)
...+|.|++|+|+
T Consensus 85 ~g~~~vDgIL~DLGv 99 (285)
T 1wg8_A 85 LGVERVDGILADLGV 99 (285)
T ss_dssp TTCSCEEEEEEECSC
T ss_pred cCCCCcCEEEeCCcc
Confidence 1369999999886
No 283
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.82 E-value=1e-08 Score=96.42 Aligned_cols=103 Identities=15% Similarity=0.121 Sum_probs=74.6
Q ss_pred CCEEEEecCCCChH---HHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCC
Q 041272 95 GDTVVDATCGNGYD---TLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKS 171 (267)
Q Consensus 95 ~~~VLDlGcG~G~~---~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~ 171 (267)
+..|||+|||+|.+ ++.+++..+. ..+|++||.|+ +...|++..++++ +.++|++++++.+++. ++
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~---~vkVyAVEknp-~A~~a~~~v~~N~---~~dkVtVI~gd~eev~--LP-- 426 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADR---RIKLYAVEKNP-NAVVTLENWQFEE---WGSQVTVVSSDMREWV--AP-- 426 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTC---EEEEEEEESCH-HHHHHHHHHHHHT---TGGGEEEEESCTTTCC--CS--
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCC---CcEEEEEECCH-HHHHHHHHHHhcc---CCCeEEEEeCcceecc--CC--
Confidence 34799999999999 4555554322 24799999998 5668888888887 6789999998876653 22
Q ss_pred CcEEEEEEeC-CCCCCCCCceeechhhHHHHHHHHHhcccCCcEEE
Q 041272 172 TAVRLVAFNL-GYLPGGDKSVITTSETTKMALEAAERILIPGGLIS 216 (267)
Q Consensus 172 ~~~d~ii~~~-~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 216 (267)
.++|+||+-. |+.-. . +...+++...-|.|||||+++
T Consensus 427 EKVDIIVSEwMG~fLl------~--E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 427 EKADIIVSELLGSFAD------N--ELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp SCEEEEECCCCBTTBG------G--GCHHHHHHHHGGGEEEEEEEE
T ss_pred cccCEEEEEcCccccc------c--cCCHHHHHHHHHhcCCCcEEc
Confidence 3799999873 33111 1 223467777789999999985
No 284
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.75 E-value=3.1e-07 Score=80.77 Aligned_cols=97 Identities=14% Similarity=0.031 Sum_probs=65.5
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
..+++|++|||+||++|.+|..++++ +++|+|||+.+ |-. .+.. ..+|++++.|.. ...+
T Consensus 207 ~~l~~G~~vlDLGAaPGGWT~~l~~r------g~~V~aVD~~~-l~~----~l~~------~~~V~~~~~d~~---~~~~ 266 (375)
T 4auk_A 207 ERLANGMWAVDLGACPGGWTYQLVKR------NMWVYSVDNGP-MAQ----SLMD------TGQVTWLREDGF---KFRP 266 (375)
T ss_dssp HHSCTTCEEEEETCTTCHHHHHHHHT------TCEEEEECSSC-CCH----HHHT------TTCEEEECSCTT---TCCC
T ss_pred ccCCCCCEEEEeCcCCCHHHHHHHHC------CCEEEEEEhhh-cCh----hhcc------CCCeEEEeCccc---cccC
Confidence 35789999999999999999999988 57999999865 211 1111 468899886653 3344
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEE
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLIS 216 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 216 (267)
+..++|++++|+.. .+......+..+...+..++.++
T Consensus 267 ~~~~~D~vvsDm~~----------~p~~~~~l~~~wl~~~~~~~aI~ 303 (375)
T 4auk_A 267 TRSNISWMVCDMVE----------KPAKVAALMAQWLVNGWCRETIF 303 (375)
T ss_dssp CSSCEEEEEECCSS----------CHHHHHHHHHHHHHTTSCSEEEE
T ss_pred CCCCcCEEEEcCCC----------ChHHhHHHHHHHHhccccceEEE
Confidence 45689999999522 23333445555554444445443
No 285
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.74 E-value=6.2e-08 Score=81.81 Aligned_cols=116 Identities=13% Similarity=0.113 Sum_probs=74.1
Q ss_pred CCCEEEEecCCCChHHHHHHHhc------CCCCC--CcEEEEEeCCh---HHHH-----------HHHHHHhhccc----
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMV------ADESS--AGCVYGLDIQS---EALK-----------STSSLLDKTTS---- 147 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~------~~~~p--~~~v~giD~s~---~~i~-----------~a~~~~~~~~~---- 147 (267)
+..+|||+|+|+|+.++.+++.. .++.+ ..+++++|..+ +++. .|++.++....
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 45699999999999998887753 22000 25899999887 4444 55665553100
Q ss_pred ------cccccceEEEecChhhhhhcCCC--CCcEEEEEEeCCCCCCCCCceeechh-hHHHHHHHHHhcccCCcEEE
Q 041272 148 ------KAEKGLVKLFNMCHSRMEEIVPK--STAVRLVAFNLGYLPGGDKSVITTSE-TTKMALEAAERILIPGGLIS 216 (267)
Q Consensus 148 ------~~~~~~v~~~~~~~~~l~~~~~~--~~~~d~ii~~~~~lp~~d~~~~~~~~-~~~~~l~~~~~~LkpgG~l~ 216 (267)
..-..+++++.+|..+....... ...||+++.|.. -|.. .++ -..++++.+.++|||||+|+
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~f-sp~~------~p~lw~~~~l~~l~~~L~pGG~l~ 210 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGF-APAK------NPDMWTQNLFNAMARLARPGGTLA 210 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSS-CTTT------CGGGCCHHHHHHHHHHEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCC-Cccc------ChhhcCHHHHHHHHHHcCCCcEEE
Confidence 00124677888888775443322 126999999831 1111 111 02589999999999999986
No 286
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.72 E-value=1.1e-08 Score=86.34 Aligned_cols=115 Identities=15% Similarity=0.109 Sum_probs=71.5
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.++++.+|||||||+|.++..+++..+ ...|+|+|+...+...+... ...+ .++.....+. ++..+ .
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~g----v~sV~GvdvG~d~~~~pi~~-~~~g-----~~ii~~~~~~-dv~~l--~ 153 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKN----VKKVMAFTLGVQGHEKPIMR-TTLG-----WNLIRFKDKT-DVFNM--E 153 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTT----EEEEEEECCCCTTSCCCCCC-CBTT-----GGGEEEECSC-CGGGS--C
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcC----CCeeeeEEeccCcccccccc-ccCC-----CceEEeeCCc-chhhc--C
Confidence 678999999999999999999997654 36899999987643222110 0011 1222222111 22222 2
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCC--cEEEEEEec
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPG--GLISMVVYV 221 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~Lkpg--G~l~i~~~~ 221 (267)
...+|+|++|+..- .....+++ ......++-+.++|+|| |.|++-.+.
T Consensus 154 ~~~~DvVLSDmApn-sG~~~~D~--~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 154 VIPGDTLLCDIGES-SPSIAVEE--QRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCCCSEEEECCCCC-CSCHHHHH--HHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CCCcCEEEecCccC-CCChHHHH--HHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 34799999997442 22111111 12224578888999999 999998883
No 287
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.71 E-value=3.2e-08 Score=93.30 Aligned_cols=107 Identities=13% Similarity=0.034 Sum_probs=72.9
Q ss_pred CCEEEEecCCCChHHHH---HHHhcC---------CCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChh
Q 041272 95 GDTVVDATCGNGYDTLM---MLKMVA---------DESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHS 162 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~---la~~~~---------~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~ 162 (267)
+..|||+|||+|.++.. +++..+ . ..+|++||.|+.++...++... ++ +.++|+++.++.+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~---~~kVyAVEknp~A~~~l~~~~~-Ng---~~d~VtVI~gd~e 482 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESL---KVKLYIVEKNPNAIVTLKYMNV-RT---WKRRVTIIESDMR 482 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCC---EEEEEEEECCHHHHHHHHHHHH-HT---TTTCSEEEESCGG
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCcccccccccc---ccEEEEEeCChHHHHHHHHHHh-cC---CCCeEEEEeCchh
Confidence 35899999999999643 333222 1 2599999999988766555544 55 4577999999988
Q ss_pred hhhhc--CCCCCcEEEEEEeC-CCCCCCCCceeechhhHHHHHHHHHhcccCCcEEE
Q 041272 163 RMEEI--VPKSTAVRLVAFNL-GYLPGGDKSVITTSETTKMALEAAERILIPGGLIS 216 (267)
Q Consensus 163 ~l~~~--~~~~~~~d~ii~~~-~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 216 (267)
++.-. .....++|+||+-+ |++- ..+...++|..+-+.|||||+++
T Consensus 483 ev~lp~~~~~~ekVDIIVSElmGsfl--------~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 483 SLPGIAKDRGFEQPDIIVSELLGSFG--------DNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp GHHHHHHHTTCCCCSEEEECCCBTTB--------GGGSHHHHHHTTGGGSCTTCEEE
T ss_pred hcccccccCCCCcccEEEEecccccc--------chhccHHHHHHHHHhCCCCcEEE
Confidence 77541 00123799999984 2211 11233567888889999999875
No 288
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.60 E-value=3.2e-07 Score=85.21 Aligned_cols=127 Identities=19% Similarity=0.219 Sum_probs=83.0
Q ss_pred cCCCCEEEEecCCCChHHHHHHHhcCCCCC---------CcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChh
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKMVADESS---------AGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHS 162 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~~~~~~p---------~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~ 162 (267)
..++.+|+|.+||+|.+...+.+++....+ ...++|+|+++.+...|+-|+--++ .....+..++.-
T Consensus 215 p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg----~~~~~I~~~dtL 290 (530)
T 3ufb_A 215 PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHG----LEYPRIDPENSL 290 (530)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHT----CSCCEEECSCTT
T ss_pred cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcC----Cccccccccccc
Confidence 456789999999999999888776532111 1369999999999999999987776 333344444432
Q ss_pred hhh-hcCCCCCcEEEEEEeCCCCCCCCCceee-------chhhHHHHHHHHHhccc-------CCcEEEEEEecC
Q 041272 163 RME-EIVPKSTAVRLVAFNLGYLPGGDKSVIT-------TSETTKMALEAAERILI-------PGGLISMVVYVG 222 (267)
Q Consensus 163 ~l~-~~~~~~~~~d~ii~~~~~lp~~d~~~~~-------~~~~~~~~l~~~~~~Lk-------pgG~l~i~~~~~ 222 (267)
... ....+...||+|++|+||-...+..... .......++..+.+.|| |||++.++.+.+
T Consensus 291 ~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g 365 (530)
T 3ufb_A 291 RFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNG 365 (530)
T ss_dssp CSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHH
T ss_pred cCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecch
Confidence 111 1111234699999999883222211110 11223457777888776 799999998754
No 289
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.58 E-value=7.3e-07 Score=78.74 Aligned_cols=122 Identities=14% Similarity=0.103 Sum_probs=83.1
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccc----cccccceEEEecChhhhhh-cC
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTS----KAEKGLVKLFNMCHSRMEE-IV 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~----~~~~~~v~~~~~~~~~l~~-~~ 168 (267)
+..+||-||-|.|..+..+.++ + ..+|+.||+++..++.|++.+..... +....+++++.+|.....+ ..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~----~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~ 279 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-K----PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYA 279 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C----CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHhc-C----CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhh
Confidence 4579999999999999999875 2 37899999999999999998643211 0113568888877765443 22
Q ss_pred CCCCcEEEEEEeCCCCCCC-CCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 169 PKSTAVRLVAFNLGYLPGG-DKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~-d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.....||+|+.|+..-+.. +..-.......+++++.+.+.|+|||+++....
T Consensus 280 ~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 280 KEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp HHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 2234799999996432211 100011122347889999999999999976543
No 290
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.58 E-value=2.1e-07 Score=77.39 Aligned_cols=112 Identities=16% Similarity=0.076 Sum_probs=66.3
Q ss_pred hcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhh--ccccccccceEEEec-Chhhhhhc
Q 041272 91 VVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDK--TTSKAEKGLVKLFNM-CHSRMEEI 167 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~--~~~~~~~~~v~~~~~-~~~~l~~~ 167 (267)
.++++++|||+||++|.++..+++..+. +.|.|.++.... . ..-+.. .+ ..-+.|.++ |..++
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~v----g~V~G~vig~D~-~--~~P~~~~~~G----v~~i~~~~G~Df~~~--- 135 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNV----QEVRGYTKGGPG-H--EEPMLMQSYG----WNIVTMKSGVDVFYK--- 135 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTE----EEEEEECCCSTT-S--CCCCCCCSTT----GGGEEEECSCCGGGS---
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCC----CCceeEEEcccc-c--cCCCcccCCC----ceEEEeeccCCccCC---
Confidence 6889999999999999999999987321 233444433221 0 000000 01 112344444 44332
Q ss_pred CCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCc-EEEEEEec
Q 041272 168 VPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGG-LISMVVYV 221 (267)
Q Consensus 168 ~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG-~l~i~~~~ 221 (267)
+..++|+|++|+..- .....+++ .....+++-+.++|+||| .|++-++.
T Consensus 136 --~~~~~DvVLSDMAPn-SG~~~vD~--~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 136 --PSEISDTLLCDIGES-SPSAEIEE--QRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp --CCCCCSEEEECCCCC-CSCHHHHH--HHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred --CCCCCCEEEeCCCCC-CCccHHHH--HHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 133699999998653 33222222 111227777889999999 99888884
No 291
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.57 E-value=2.6e-07 Score=75.70 Aligned_cols=131 Identities=17% Similarity=0.148 Sum_probs=84.0
Q ss_pred hhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEec-ChhhhhhcC
Q 041272 90 HVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNM-CHSRMEEIV 168 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~ 168 (267)
..++++++||||||++|.++..++...+. .+|+|+|+-..-.+.= ...+..| ...++|.++ |...+.
T Consensus 74 ~~l~~g~~VvDLGaapGGWSq~~a~~~g~----~~V~avdvG~~ghe~P-~~~~s~g----wn~v~fk~gvDv~~~~--- 141 (267)
T 3p8z_A 74 NMVIPEGRVIDLGCGRGGWSYYCAGLKKV----TEVRGYTKGGPGHEEP-VPMSTYG----WNIVKLMSGKDVFYLP--- 141 (267)
T ss_dssp TSSCCCEEEEEESCTTSHHHHHHHTSTTE----EEEEEECCCSTTSCCC-CCCCCTT----TTSEEEECSCCGGGCC---
T ss_pred cCCCCCCEEEEcCCCCCcHHHHHHHhcCC----CEEEEEecCCCCccCc-chhhhcC----cCceEEEeccceeecC---
Confidence 36789999999999999999999988654 6899999876432100 0011223 467888876 442222
Q ss_pred CCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhC
Q 041272 169 PKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSL 240 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l 240 (267)
+ .++|.+++|++. ..+. -.........+|+-+.+.|++ |-+++-++ .+..++..+.++.+...+
T Consensus 142 ~--~~~DtllcDIge-Ss~~--~~vE~~RtlrvLela~~wL~~-~~fc~KVl--~py~p~v~e~l~~lq~~f 205 (267)
T 3p8z_A 142 P--EKCDTLLCDIGE-SSPS--PTVEESRTIRVLKMVEPWLKN-NQFCIKVL--NPYMPTVIEHLERLQRKH 205 (267)
T ss_dssp C--CCCSEEEECCCC-CCSC--HHHHHHHHHHHHHHHGGGCSS-CEEEEEES--CCCSHHHHHHHHHHHHHH
T ss_pred C--ccccEEEEecCC-CCCC--hhhhhhHHHHHHHHHHHhccc-CCEEEEEc--cCCChhHHHHHHHHHHHh
Confidence 2 469999999876 2221 111223334578888899999 77877666 343444445555555443
No 292
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.54 E-value=2.4e-07 Score=78.64 Aligned_cols=141 Identities=17% Similarity=0.148 Sum_probs=79.3
Q ss_pred hhHHHHhhHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEE
Q 041272 78 TLITIAANGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLF 157 (267)
Q Consensus 78 ~~~~~~~~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~ 157 (267)
..+.++... ..++++.+||||||++|.++..+++..+ ...|+|+|+...+....... ...+ ..-+.+.
T Consensus 68 ~KL~ei~ek---~l~~~g~~vlDLGaaPGgWsqva~~~~g----v~sV~Gvdlg~~~~~~P~~~-~~~~----~~iv~~~ 135 (300)
T 3eld_A 68 AKIRWLHER---GYLRITGRVLDLGCGRGGWSYYAAAQKE----VMSVKGYTLGIEGHEKPIHM-QTLG----WNIVKFK 135 (300)
T ss_dssp HHHHHHHHH---TSCCCCEEEEEETCTTCHHHHHHHTSTT----EEEEEEECCCCTTSCCCCCC-CBTT----GGGEEEE
T ss_pred HHHHHHHHh---CCCCCCCEEEEcCCCCCHHHHHHHHhcC----CceeeeEEeccccccccccc-cccC----CceEEee
Confidence 344444433 4567899999999999999999998754 36899999976431110000 0001 1112222
Q ss_pred ecChhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCC-cEEEEEEecCCCCChhhHHHHHHH
Q 041272 158 NMCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPG-GLISMVVYVGHPGGREELEAVEAF 236 (267)
Q Consensus 158 ~~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~~~~~~~~~~~~~~~~ 236 (267)
.+ .++..+ ....+|+|++|+..- .....+++ ......++-+.++|+|| |.|++-.+. +.+......+..+
T Consensus 136 ~~--~di~~l--~~~~~DlVlsD~APn-sG~~~~D~--~rs~~LL~~A~~~LkpG~G~FV~KvF~--~yG~~~~~ll~~l 206 (300)
T 3eld_A 136 DK--SNVFTM--PTEPSDTLLCDIGES-SSNPLVER--DRTMKVLENFERWKHVNTENFCVKVLA--PYHPDVIEKLERL 206 (300)
T ss_dssp CS--CCTTTS--CCCCCSEEEECCCCC-CSSHHHHH--HHHHHHHHHHHHHCCTTCCEEEEEESS--TTSHHHHHHHHHH
T ss_pred cC--ceeeec--CCCCcCEEeecCcCC-CCCHHHHH--HHHHHHHHHHHHHhcCCCCcEEEEecc--ccCccHHHHHHHH
Confidence 11 122222 234799999996432 22111111 12234478888999999 999998883 2233333444444
Q ss_pred HHh
Q 041272 237 ARS 239 (267)
Q Consensus 237 ~~~ 239 (267)
...
T Consensus 207 k~~ 209 (300)
T 3eld_A 207 QLR 209 (300)
T ss_dssp HHH
T ss_pred HHh
Confidence 333
No 293
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.49 E-value=8.2e-07 Score=75.08 Aligned_cols=133 Identities=17% Similarity=0.134 Sum_probs=81.4
Q ss_pred hhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEec-Chhhhhhc
Q 041272 89 KHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNM-CHSRMEEI 167 (267)
Q Consensus 89 ~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~ 167 (267)
+..++++++||||||++|.++..++...+. .+|+|+|+-..--+.= ...+..+ ...|.+..+ |...+..
T Consensus 89 ~~~l~~~~~VlDLGaapGGwsq~~~~~~gv----~~V~avdvG~~~he~P-~~~~ql~----w~lV~~~~~~Dv~~l~~- 158 (321)
T 3lkz_A 89 RRFLEPVGKVIDLGCGRGGWCYYMATQKRV----QEVRGYTKGGPGHEEP-QLVQSYG----WNIVTMKSGVDVFYRPS- 158 (321)
T ss_dssp TTSCCCCEEEEEETCTTCHHHHHHTTCTTE----EEEEEECCCSTTSCCC-CCCCBTT----GGGEEEECSCCTTSSCC-
T ss_pred hcCCCCCCEEEEeCCCCCcHHHHHHhhcCC----CEEEEEEcCCCCccCc-chhhhcC----CcceEEEeccCHhhCCC-
Confidence 346789999999999999999999987653 6899999976521100 0001111 234677664 3322222
Q ss_pred CCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCC-cEEEEEEecCCCCChhhHHHHHHHHHhC
Q 041272 168 VPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPG-GLISMVVYVGHPGGREELEAVEAFARSL 240 (267)
Q Consensus 168 ~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~~~~~~~~~~~~~~~~~~~l 240 (267)
.++|++++|++.... .-.........+|+-+.+.|++| |-+++-++. +...+..+.++.+...+
T Consensus 159 ----~~~D~ivcDigeSs~---~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~--pY~~~v~e~l~~lq~~f 223 (321)
T 3lkz_A 159 ----ECCDTLLCDIGESSS---SAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLC--PYMPKVIEKMELLQRRY 223 (321)
T ss_dssp ----CCCSEEEECCCCCCS---CHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESC--TTSHHHHHHHHHHHHHH
T ss_pred ----CCCCEEEEECccCCC---ChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcC--CCChHHHHHHHHHHHHh
Confidence 469999999764111 11112233345788888999999 888887763 32333345555555443
No 294
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.38 E-value=4.6e-06 Score=74.04 Aligned_cols=122 Identities=11% Similarity=0.066 Sum_probs=76.1
Q ss_pred CCEEEEecCCCChHHHHHHHh-------------cCCCCCCcEEEEEeCC-----------hHHHHHHHHHHhhcccccc
Q 041272 95 GDTVVDATCGNGYDTLMMLKM-------------VADESSAGCVYGLDIQ-----------SEALKSTSSLLDKTTSKAE 150 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~-------------~~~~~p~~~v~giD~s-----------~~~i~~a~~~~~~~~~~~~ 150 (267)
..+|+|+||++|..|+.+... .+.+.|..+|+.-|+- +.+.+.+++. .+ .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~g---~ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---NG---R 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---TC---C
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---cc---C
Confidence 468999999999999888776 2212356789999988 4444433221 11 0
Q ss_pred ccceEEEecChhhhhhcCCCCCcEEEEEEeC--CCCCCCCCcee-------------e---ch------------hhHHH
Q 041272 151 KGLVKLFNMCHSRMEEIVPKSTAVRLVAFNL--GYLPGGDKSVI-------------T---TS------------ETTKM 200 (267)
Q Consensus 151 ~~~v~~~~~~~~~l~~~~~~~~~~d~ii~~~--~~lp~~d~~~~-------------~---~~------------~~~~~ 200 (267)
..+.-|+.+..+.+..-+.++.++|+++++. +++......+. . .+ .+...
T Consensus 127 ~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 127 KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHH
Confidence 1234566666666666566677999999885 44433221111 0 01 12234
Q ss_pred HHHHHHhcccCCcEEEEEEecC
Q 041272 201 ALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 201 ~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
+|+...+.|+|||+++++....
T Consensus 207 FL~~Ra~eL~pGG~mvl~~~gr 228 (384)
T 2efj_A 207 FLRIHSEELISRGRMLLTFICK 228 (384)
T ss_dssp HHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHhccCCeEEEEEecC
Confidence 5778899999999999887743
No 295
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.35 E-value=9.4e-07 Score=76.09 Aligned_cols=60 Identities=13% Similarity=0.175 Sum_probs=49.8
Q ss_pred HHHHhhHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhc
Q 041272 80 ITIAANGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKT 145 (267)
Q Consensus 80 ~~~~~~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~ 145 (267)
...+...++...-.+++.|||++||+|..+..+++. +.+++|+|+++++++.|+++++..
T Consensus 221 p~~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~------g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 221 PLELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARW------GRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CHHHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc------CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 344555555544568999999999999999998876 579999999999999999999764
No 296
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.24 E-value=4.8e-06 Score=73.78 Aligned_cols=128 Identities=16% Similarity=0.149 Sum_probs=77.3
Q ss_pred CCEEEEecCCCChHHHHHHHhc-----------CCCCCCcEEEEEeCChHHHHHHHHHHhhcccc--------ccccceE
Q 041272 95 GDTVVDATCGNGYDTLMMLKMV-----------ADESSAGCVYGLDIQSEALKSTSSLLDKTTSK--------AEKGLVK 155 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~-----------~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~--------~~~~~v~ 155 (267)
..+|+|+|||+|..|+.++..+ +.+-|..+|+.-|+-.......=+.+.....+ ....+.-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 4689999999999998873321 11124688999998887765444444321100 0001123
Q ss_pred EEecChhhhhhcCCCCCcEEEEEEeC--CCCCCCCCcee------------e----ch-----------hhHHHHHHHHH
Q 041272 156 LFNMCHSRMEEIVPKSTAVRLVAFNL--GYLPGGDKSVI------------T----TS-----------ETTKMALEAAE 206 (267)
Q Consensus 156 ~~~~~~~~l~~~~~~~~~~d~ii~~~--~~lp~~d~~~~------------~----~~-----------~~~~~~l~~~~ 206 (267)
|+.+..+....-+.++.++|+++++. +++......+. + .+ .+...+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444445567999999885 55543322211 0 01 23455788889
Q ss_pred hcccCCcEEEEEEecC
Q 041272 207 RILIPGGLISMVVYVG 222 (267)
Q Consensus 207 ~~LkpgG~l~i~~~~~ 222 (267)
+.|+|||+++++....
T Consensus 213 ~eL~pGG~mvl~~~gr 228 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGR 228 (374)
T ss_dssp HHEEEEEEEEEEEEEC
T ss_pred HHhCCCCEEEEEEecC
Confidence 9999999999987743
No 297
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.10 E-value=6.9e-06 Score=69.26 Aligned_cols=61 Identities=16% Similarity=0.253 Sum_probs=50.2
Q ss_pred HHHHhhHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcc
Q 041272 80 ITIAANGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTT 146 (267)
Q Consensus 80 ~~~~~~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~ 146 (267)
...+...++.....+|+.|||..||+|..+..+++. +.+++|+|+++.+++.|+++++.++
T Consensus 198 p~~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~------gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 198 PRDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKL------GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp CHHHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc------CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 345566666655678999999999999999998876 5799999999999999999998754
No 298
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.05 E-value=4.3e-06 Score=63.67 Aligned_cols=53 Identities=15% Similarity=-0.027 Sum_probs=40.3
Q ss_pred hHHHHhhHHHhhhcCCCCEEEEecCCCC-hHHHHHHHhcCCCCCCcEEEEEeCChHHHH
Q 041272 79 LITIAANGVWKHVVRKGDTVVDATCGNG-YDTLMMLKMVADESSAGCVYGLDIQSEALK 136 (267)
Q Consensus 79 ~~~~~~~~l~~~~l~~~~~VLDlGcG~G-~~~~~la~~~~~~~p~~~v~giD~s~~~i~ 136 (267)
.+.+....++.....++.+|||+|||+| ..+..|++.. +..|+++|+++.+++
T Consensus 20 ~m~e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~-----g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 20 HMWNDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHS-----KVDLVLTDIKPSHGG 73 (153)
T ss_dssp HHHHHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHS-----CCEEEEECSSCSSTT
T ss_pred hHHHHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhC-----CCeEEEEECCccccc
Confidence 3443344444445667789999999999 6999999853 478999999998876
No 299
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.97 E-value=9.5e-06 Score=68.76 Aligned_cols=106 Identities=13% Similarity=0.086 Sum_probs=77.6
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh-hhhcCCCCC
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR-MEEIVPKST 172 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~~~~ 172 (267)
.+..+||+.+|||.+++.+.+. +.+++.+|.++..++..++|++. ..+++++..|... +....++..
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~------~d~~vfvE~~~~a~~~L~~Nl~~------~~~~~V~~~D~~~~L~~l~~~~~ 158 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRS------QDRLYLCELHPTEYNFLLKLPHF------NKKVYVNHTDGVSKLNALLPPPE 158 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCT------TSEEEEECCSHHHHHHHTTSCCT------TSCEEEECSCHHHHHHHHCSCTT
T ss_pred cCCCceeEeCCcHHHHHHHcCC------CCeEEEEeCCHHHHHHHHHHhCc------CCcEEEEeCcHHHHHHHhcCCCC
Confidence 3567999999999999998874 46999999999999999999875 3578888888654 454555555
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHh--cccCCcEEEEEEe
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAER--ILIPGGLISMVVY 220 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~--~LkpgG~l~i~~~ 220 (267)
.||+|+.|++|=-. ....++++.+.+ .+.|+|++++--+
T Consensus 159 ~fdLVfiDPPYe~k---------~~~~~vl~~L~~~~~r~~~Gi~v~WYP 199 (283)
T 2oo3_A 159 KRGLIFIDPSYERK---------EEYKEIPYAIKNAYSKFSTGLYCVWYP 199 (283)
T ss_dssp SCEEEEECCCCCST---------THHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CccEEEECCCCCCC---------cHHHHHHHHHHHhCccCCCeEEEEEEe
Confidence 79999999877211 123344444433 3479999866443
No 300
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.97 E-value=1.7e-05 Score=69.79 Aligned_cols=124 Identities=12% Similarity=0.165 Sum_probs=83.2
Q ss_pred CCEEEEecCCCChHHHHHHHh-----------cCC-CCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChh
Q 041272 95 GDTVVDATCGNGYDTLMMLKM-----------VAD-ESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHS 162 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~-----------~~~-~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~ 162 (267)
..+|+|+||++|..|+.+... .+. +.|..+|+.-|+........-+.+..... ..+.-|+.+..+
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~---~~~~~f~~gvpg 128 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEND---VDGVCFINGVPG 128 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCS---CTTCEEEEEEES
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcc---cCCCEEEEecch
Confidence 358999999999888765544 121 23578999999999999988887754210 013355655555
Q ss_pred hhhhcCCCCCcEEEEEEeC--CCCCCCCCcee-----------------e-----chhhHHHHHHHHHhcccCCcEEEEE
Q 041272 163 RMEEIVPKSTAVRLVAFNL--GYLPGGDKSVI-----------------T-----TSETTKMALEAAERILIPGGLISMV 218 (267)
Q Consensus 163 ~l~~~~~~~~~~d~ii~~~--~~lp~~d~~~~-----------------~-----~~~~~~~~l~~~~~~LkpgG~l~i~ 218 (267)
.+..-+.++.++|+++++. +++......+. . -..+...+|+.-.+.|+|||+++++
T Consensus 129 SFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 129 SFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp CSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 5555555667899999885 55443221110 0 1234567899999999999999988
Q ss_pred Eec
Q 041272 219 VYV 221 (267)
Q Consensus 219 ~~~ 221 (267)
...
T Consensus 209 ~~g 211 (359)
T 1m6e_X 209 ILG 211 (359)
T ss_dssp EEE
T ss_pred Eec
Confidence 763
No 301
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.97 E-value=0.00013 Score=61.73 Aligned_cols=107 Identities=8% Similarity=-0.023 Sum_probs=67.7
Q ss_pred cCCCCEEEEecC------CCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhh
Q 041272 92 VRKGDTVVDATC------GNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRME 165 (267)
Q Consensus 92 l~~~~~VLDlGc------G~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~ 165 (267)
++.|++|||+|+ -+|.+ .+.+. ++ .++.|+++|+.+-.. ... .++++|...+.
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~-~p--~g~~VVavDL~~~~s---------------da~-~~IqGD~~~~~ 165 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQW-LP--TGTLLVDSDLNDFVS---------------DAD-STLIGDCATVH 165 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHH-SC--TTCEEEEEESSCCBC---------------SSS-EEEESCGGGEE
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHh-CC--CCcEEEEeeCccccc---------------CCC-eEEEccccccc
Confidence 568999999996 55662 33333 33 035999999987431 112 33776654322
Q ss_pred hcCCCCCcEEEEEEeCCCCCCCCCceee--chhhHHHHHHHHHhcccCCcEEEEEEecCC
Q 041272 166 EIVPKSTAVRLVAFNLGYLPGGDKSVIT--TSETTKMALEAAERILIPGGLISMVVYVGH 223 (267)
Q Consensus 166 ~~~~~~~~~d~ii~~~~~lp~~d~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 223 (267)
. ..++|+|++|+..--.......+ ...-.+.+++-+.+.|+|||.|++-++.+.
T Consensus 166 ~----~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGs 221 (344)
T 3r24_A 166 T----ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS 221 (344)
T ss_dssp E----SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS
T ss_pred c----CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCC
Confidence 2 35799999997431111111112 223457788888999999999999998554
No 302
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.74 E-value=0.0003 Score=61.79 Aligned_cols=61 Identities=11% Similarity=0.054 Sum_probs=50.4
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhh
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRME 165 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~ 165 (267)
++..|||||.|.|.+|..|++.... .+|++||+++.++...++.. . ..+++++.+|.-++.
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~----~~vvavE~D~~l~~~L~~~~-~------~~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCP----RQYSLLEKRSSLYKFLNAKF-E------GSPLQILKRDPYDWS 118 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCC----SEEEEECCCHHHHHHHHHHT-T------TSSCEEECSCTTCHH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCC----CEEEEEecCHHHHHHHHHhc-c------CCCEEEEECCccchh
Confidence 3589999999999999999987432 68999999999999888876 2 258999998886553
No 303
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=97.58 E-value=0.00055 Score=57.33 Aligned_cols=135 Identities=16% Similarity=0.069 Sum_probs=84.2
Q ss_pred cCCCCEEEEecCCCChHHHHHHHh---cCCCCCCcEEEEEeCChHHH---------------------------HHH---
Q 041272 92 VRKGDTVVDATCGNGYDTLMMLKM---VADESSAGCVYGLDIQSEAL---------------------------KST--- 138 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la~~---~~~~~p~~~v~giD~s~~~i---------------------------~~a--- 138 (267)
+.-.+.|+|+||-.|..+..++.. +.+..+..+|+++|--+.+- +..
T Consensus 67 ~~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~ 146 (257)
T 3tos_A 67 LDVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDA 146 (257)
T ss_dssp TTSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHH
T ss_pred hCCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHH
Confidence 344569999999999999887753 21111357999999322221 111
Q ss_pred HHHHhhccccccccceEEEecChhh-hhhcC--CCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEE
Q 041272 139 SSLLDKTTSKAEKGLVKLFNMCHSR-MEEIV--PKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLI 215 (267)
Q Consensus 139 ~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~--~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l 215 (267)
.++.+..+ ....+++++.++..+ +..++ .+...+|++..|. . ........++.+...|+|||++
T Consensus 147 ~~~~~~~g--~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~----------D-~Y~~t~~~le~~~p~l~~GGvI 213 (257)
T 3tos_A 147 HECSDFFG--HVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL----------D-LYEPTKAVLEAIRPYLTKGSIV 213 (257)
T ss_dssp HHTTSTTT--TSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC----------C-CHHHHHHHHHHHGGGEEEEEEE
T ss_pred HhhhhhcC--CCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC----------c-ccchHHHHHHHHHHHhCCCcEE
Confidence 11111222 113789999988874 33332 2234699999983 1 2455678899999999999999
Q ss_pred EEEEecCCCCChhhHHHHHHHHHhC
Q 041272 216 SMVVYVGHPGGREELEAVEAFARSL 240 (267)
Q Consensus 216 ~i~~~~~~~~~~~~~~~~~~~~~~l 240 (267)
++-++ +++.-..+.+++.+++...
T Consensus 214 v~DD~-~~~~w~G~~~A~~ef~~~~ 237 (257)
T 3tos_A 214 AFDEL-DNPKWPGENIAMRKVLGLD 237 (257)
T ss_dssp EESST-TCTTCTHHHHHHHHHTCTT
T ss_pred EEcCC-CCCCChHHHHHHHHHHhhC
Confidence 88765 3332334566666666543
No 304
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.57 E-value=0.00076 Score=59.78 Aligned_cols=134 Identities=10% Similarity=-0.058 Sum_probs=75.8
Q ss_pred CEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh--c---CCC
Q 041272 96 DTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE--I---VPK 170 (267)
Q Consensus 96 ~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~--~---~~~ 170 (267)
.+|+|+.||.|.+++.+.+. | ...|.++|+++.+++..+.|.. +..++++|..++.. + ...
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G----~~~v~avE~d~~a~~t~~~N~~---------~~~~~~~DI~~~~~~~~~~~~~~ 68 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-G----FDVKMAVEIDQHAINTHAINFP---------RSLHVQEDVSLLNAEIIKGFFKN 68 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-T----CEEEEEECSCHHHHHHHHHHCT---------TSEEECCCGGGCCHHHHHHHHCS
T ss_pred CeEEEEccCcCHHHHHHHHC-C----CcEEEEEeCCHHHHHHHHHhCC---------CCceEecChhhcCHHHHHhhccc
Confidence 58999999999999999876 2 2357799999999888887643 34455555554422 1 112
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhh-HHHHH---HHHHhcccCCcEEEEEEecCCCCChhhHHHHHHHHHhCCCCceE
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSET-TKMAL---EAAERILIPGGLISMVVYVGHPGGREELEAVEAFARSLSVDDWI 246 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~-~~~~l---~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 246 (267)
...+|+++..++.=+++....- ...+ ....+ -++.+.++|.-.+ ......-........++.+. .+...+|.
T Consensus 69 ~~~~D~i~ggpPCQ~fS~ag~~-~~~d~r~~L~~~~~~~v~~~~P~~~v--~ENV~gl~s~~~~~~~~~i~-~l~~~GY~ 144 (376)
T 3g7u_A 69 DMPIDGIIGGPPCQGFSSIGKG-NPDDSRNQLYMHFYRLVSELQPLFFL--AENVPGIMQEKYSGIRNKAF-NLVSGDYD 144 (376)
T ss_dssp CCCCCEEEECCCCCTTC--------CHHHHHHHHHHHHHHHHHCCSEEE--EEECTTTTCGGGHHHHHHHH-HHHHTTEE
T ss_pred CCCeeEEEecCCCCCcccccCC-CCCCchHHHHHHHHHHHHHhCCCEEE--EecchHhhccCcHHHHHHHH-HHHcCCCc
Confidence 3469999999875444321111 1111 11222 2344556885444 33322222223334444555 55556677
Q ss_pred E
Q 041272 247 C 247 (267)
Q Consensus 247 ~ 247 (267)
+
T Consensus 145 v 145 (376)
T 3g7u_A 145 I 145 (376)
T ss_dssp E
T ss_pred c
Confidence 6
No 305
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.52 E-value=0.00042 Score=61.12 Aligned_cols=100 Identities=20% Similarity=0.209 Sum_probs=69.7
Q ss_pred hhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh----h
Q 041272 90 HVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR----M 164 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~----l 164 (267)
..+++|++||-+|+|. |..+..+|+..+. .+|+++|.+++.++.+++. + .. .++.....+ +
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga----~~Vi~~~~~~~~~~~a~~l----G----a~--~vi~~~~~~~~~~~ 251 (371)
T 1f8f_A 186 LKVTPASSFVTWGAGAVGLSALLAAKVCGA----SIIIAVDIVESRLELAKQL----G----AT--HVINSKTQDPVAAI 251 (371)
T ss_dssp TCCCTTCEEEEESCSHHHHHHHHHHHHHTC----SEEEEEESCHHHHHHHHHH----T----CS--EEEETTTSCHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC----CeEEEECCCHHHHHHHHHc----C----CC--EEecCCccCHHHHH
Confidence 3578899999999987 8888999988752 4799999999998888652 2 11 112211112 2
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+.. .. .+|+++...+. ...++.+.+.|++||++++...
T Consensus 252 ~~~~-~g-g~D~vid~~g~---------------~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 252 KEIT-DG-GVNFALESTGS---------------PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp HHHT-TS-CEEEEEECSCC---------------HHHHHHHHHTEEEEEEEEECCC
T ss_pred HHhc-CC-CCcEEEECCCC---------------HHHHHHHHHHHhcCCEEEEeCC
Confidence 2222 22 69999887432 3678899999999999987644
No 306
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.51 E-value=0.00062 Score=59.61 Aligned_cols=79 Identities=11% Similarity=0.045 Sum_probs=52.1
Q ss_pred CEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh-cCCCCCcE
Q 041272 96 DTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE-IVPKSTAV 174 (267)
Q Consensus 96 ~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~-~~~~~~~~ 174 (267)
.+|+|+.||.|.+++.+.+.-.. ...|+++|+++.+++..+.|... ..++.+|..++.. .+. ...+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~---~~~v~~~E~d~~a~~~~~~N~~~---------~~~~~~Di~~~~~~~~~-~~~~ 69 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIP---AQVVAAIDVNTVANEVYKYNFPH---------TQLLAKTIEGITLEEFD-RLSF 69 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCS---EEEEEEECCCHHHHHHHHHHCTT---------SCEECSCGGGCCHHHHH-HHCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCC---ceEEEEEeCCHHHHHHHHHhccc---------cccccCCHHHccHhHcC-cCCc
Confidence 58999999999999999876100 13689999999999999887643 2345555544421 111 1148
Q ss_pred EEEEEeCCCCCCC
Q 041272 175 RLVAFNLGYLPGG 187 (267)
Q Consensus 175 d~ii~~~~~lp~~ 187 (267)
|+++.+++.=+++
T Consensus 70 D~l~~gpPCq~fS 82 (343)
T 1g55_A 70 DMILMSPPCQPFT 82 (343)
T ss_dssp SEEEECCC-----
T ss_pred CEEEEcCCCcchh
Confidence 9999998764443
No 307
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=97.49 E-value=0.00065 Score=59.95 Aligned_cols=104 Identities=15% Similarity=0.131 Sum_probs=71.2
Q ss_pred HHhhhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhh
Q 041272 87 VWKHVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRME 165 (267)
Q Consensus 87 l~~~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~ 165 (267)
+....+++|++||-.|+|. |..+..+|+..|. .+|+++|.+++..+.+++. | .. ..+.....++.
T Consensus 175 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga----~~Vi~~~~~~~~~~~a~~l----G----a~--~vi~~~~~~~~ 240 (370)
T 4ej6_A 175 VDLSGIKAGSTVAILGGGVIGLLTVQLARLAGA----TTVILSTRQATKRRLAEEV----G----AT--ATVDPSAGDVV 240 (370)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC----SEEEEECSCHHHHHHHHHH----T----CS--EEECTTSSCHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC----CEEEEECCCHHHHHHHHHc----C----CC--EEECCCCcCHH
Confidence 3344678999999999987 8888899988752 4999999999988887762 2 11 12221112221
Q ss_pred hc------CCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 166 EI------VPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 166 ~~------~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+. ... ..+|+++-..+. ...++.+.+.|++||++++...
T Consensus 241 ~~i~~~~~~~~-gg~Dvvid~~G~---------------~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 241 EAIAGPVGLVP-GGVDVVIECAGV---------------AETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp HHHHSTTSSST-TCEEEEEECSCC---------------HHHHHHHHHHEEEEEEEEECSC
T ss_pred HHHHhhhhccC-CCCCEEEECCCC---------------HHHHHHHHHHhccCCEEEEEec
Confidence 11 112 269999887432 3678899999999999987543
No 308
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.46 E-value=0.00053 Score=59.70 Aligned_cols=101 Identities=18% Similarity=0.114 Sum_probs=68.9
Q ss_pred hhhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc
Q 041272 89 KHVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI 167 (267)
Q Consensus 89 ~~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~ 167 (267)
...+++|++||-.|+|. |..+..+|+..| ++|+++|.+++..+.+++. + .. ..+.....++.+.
T Consensus 161 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-----a~Vi~~~~~~~~~~~~~~l----G----a~--~~i~~~~~~~~~~ 225 (340)
T 3s2e_A 161 VTDTRPGQWVVISGIGGLGHVAVQYARAMG-----LRVAAVDIDDAKLNLARRL----G----AE--VAVNARDTDPAAW 225 (340)
T ss_dssp TTTCCTTSEEEEECCSTTHHHHHHHHHHTT-----CEEEEEESCHHHHHHHHHT----T----CS--EEEETTTSCHHHH
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHCC-----CeEEEEeCCHHHHHHHHHc----C----CC--EEEeCCCcCHHHH
Confidence 34578999999999987 899999999864 6999999999998887652 2 11 1122111122111
Q ss_pred CC-CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 168 VP-KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 168 ~~-~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.. ....+|+++.+.+. ...++.+.+.|++||++++..
T Consensus 226 ~~~~~g~~d~vid~~g~---------------~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 226 LQKEIGGAHGVLVTAVS---------------PKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp HHHHHSSEEEEEESSCC---------------HHHHHHHHHHEEEEEEEEECS
T ss_pred HHHhCCCCCEEEEeCCC---------------HHHHHHHHHHhccCCEEEEeC
Confidence 10 11258888876431 367889999999999997653
No 309
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.45 E-value=0.00058 Score=59.90 Aligned_cols=100 Identities=17% Similarity=0.204 Sum_probs=68.3
Q ss_pred hhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecC---hhhh-
Q 041272 90 HVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMC---HSRM- 164 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~---~~~l- 164 (267)
..+++|++||-+|+|. |..+..+|+..|. .+|+++|.+++..+.+++. + .. .++... ..++
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga----~~Vi~~~~~~~~~~~a~~l----G----a~--~vi~~~~~~~~~~~ 232 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMGA----AQVVVTDLSATRLSKAKEI----G----AD--LVLQISKESPQEIA 232 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTC----SEEEEEESCHHHHHHHHHT----T----CS--EEEECSSCCHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC----CEEEEECCCHHHHHHHHHh----C----CC--EEEcCcccccchHH
Confidence 4578999999999987 8888899988642 4899999999988887652 2 11 122211 1222
Q ss_pred ---hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 165 ---EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 165 ---~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+... ..+|+++-..+. ...++.+.+.|++||+++....
T Consensus 233 ~~i~~~~~--~g~D~vid~~g~---------------~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 233 RKVEGQLG--CKPEVTIECTGA---------------EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp HHHHHHHT--SCCSEEEECSCC---------------HHHHHHHHHHSCTTCEEEECSC
T ss_pred HHHHHHhC--CCCCEEEECCCC---------------hHHHHHHHHHhcCCCEEEEEec
Confidence 22111 258888877432 3567888999999999977543
No 310
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=97.38 E-value=0.00065 Score=59.46 Aligned_cols=103 Identities=16% Similarity=0.186 Sum_probs=70.0
Q ss_pred HHhhhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh--
Q 041272 87 VWKHVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR-- 163 (267)
Q Consensus 87 l~~~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~-- 163 (267)
+....+++|++||-+|+|. |..+..+|+..|. .+|+++|.+++.++.+++. + . -.++.....+
T Consensus 159 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga----~~Vi~~~~~~~~~~~~~~l----G----a--~~vi~~~~~~~~ 224 (352)
T 3fpc_A 159 AELANIKLGDTVCVIGIGPVGLMSVAGANHLGA----GRIFAVGSRKHCCDIALEY----G----A--TDIINYKNGDIV 224 (352)
T ss_dssp HHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTC----SSEEEECCCHHHHHHHHHH----T----C--CEEECGGGSCHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC----cEEEEECCCHHHHHHHHHh----C----C--ceEEcCCCcCHH
Confidence 3344678999999999987 8888899988642 4899999999988888763 2 1 1122211112
Q ss_pred --hhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 164 --MEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 164 --l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
+.+.. ....+|+++-..+. ...++.+.+.|+|||+++...
T Consensus 225 ~~v~~~t-~g~g~D~v~d~~g~---------------~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 225 EQILKAT-DGKGVDKVVIAGGD---------------VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp HHHHHHT-TTCCEEEEEECSSC---------------TTHHHHHHHHEEEEEEEEECC
T ss_pred HHHHHHc-CCCCCCEEEECCCC---------------hHHHHHHHHHHhcCCEEEEec
Confidence 22222 22369999876432 257888999999999998654
No 311
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=97.36 E-value=0.00065 Score=59.26 Aligned_cols=101 Identities=13% Similarity=0.103 Sum_probs=67.5
Q ss_pred hcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecCh-hhhhhcC
Q 041272 91 VVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCH-SRMEEIV 168 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~ 168 (267)
.+ +|++||-+|+|. |..+..+|+... |+++|+++|.+++..+.+++. + .. .++.... .++....
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~---~Ga~Vi~~~~~~~~~~~~~~l----G----a~--~vi~~~~~~~~~~~~ 233 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALM---KNITIVGISRSKKHRDFALEL----G----AD--YVSEMKDAESLINKL 233 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHC---TTCEEEEECSCHHHHHHHHHH----T----CS--EEECHHHHHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhc---CCCEEEEEeCCHHHHHHHHHh----C----CC--EEeccccchHHHHHh
Confidence 56 899999999976 788888888761 125899999999988888652 2 11 1121111 1221111
Q ss_pred CCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 169 PKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.....+|+++...+. ...++.+.+.|++||+++....
T Consensus 234 ~~g~g~D~vid~~g~---------------~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 234 TDGLGASIAIDLVGT---------------EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp HTTCCEEEEEESSCC---------------HHHHHHHHHHEEEEEEEEECCC
T ss_pred hcCCCccEEEECCCC---------------hHHHHHHHHHhhcCCEEEEeCC
Confidence 112369999887542 3478889999999999977543
No 312
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=97.34 E-value=0.00068 Score=59.85 Aligned_cols=98 Identities=10% Similarity=0.103 Sum_probs=66.8
Q ss_pred hhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcC
Q 041272 90 HVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIV 168 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 168 (267)
..+++|++||-+|+|. |..+..+|+..| ++|+++|.+++.++.+++ .+ .. .++.....+.....
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-----a~Vi~~~~~~~~~~~a~~----lG----a~--~vi~~~~~~~~~~~ 254 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAMG-----AHVVAFTTSEAKREAAKA----LG----AD--EVVNSRNADEMAAH 254 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTT-----CEEEEEESSGGGHHHHHH----HT----CS--EEEETTCHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC-----CEEEEEeCCHHHHHHHHH----cC----Cc--EEeccccHHHHHHh
Confidence 3578999999999986 888888888764 579999999999888875 22 11 12221112222212
Q ss_pred CCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 169 PKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
. ..+|+++...+. ...++.+.+.|++||+++...
T Consensus 255 ~--~g~Dvvid~~g~---------------~~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 255 L--KSFDFILNTVAA---------------PHNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp T--TCEEEEEECCSS---------------CCCHHHHHTTEEEEEEEEECC
T ss_pred h--cCCCEEEECCCC---------------HHHHHHHHHHhccCCEEEEec
Confidence 1 368999877432 124677889999999987654
No 313
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=97.32 E-value=0.00063 Score=60.60 Aligned_cols=112 Identities=22% Similarity=0.240 Sum_probs=69.5
Q ss_pred hhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecCh-----hh
Q 041272 90 HVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCH-----SR 163 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~-----~~ 163 (267)
..+++|++||-+|+|. |..+..+|+..+. .+|+++|.+++.++.+++ .+ . +.+.... +.
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga----~~Vi~~~~~~~~~~~a~~----lG-----a--~~i~~~~~~~~~~~ 245 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLLGA----ACVIVGDQNPERLKLLSD----AG-----F--ETIDLRNSAPLRDQ 245 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHTC----SEEEEEESCHHHHHHHHT----TT-----C--EEEETTSSSCHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC----CEEEEEcCCHHHHHHHHH----cC-----C--cEEcCCCcchHHHH
Confidence 4578999999999987 8899999988742 499999999998888764 23 1 2222111 12
Q ss_pred hhhcCCCCCcEEEEEEeCCCCCCCC-CceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 164 MEEIVPKSTAVRLVAFNLGYLPGGD-KSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 164 l~~~~~~~~~~d~ii~~~~~lp~~d-~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
+.+.. ....+|+++-..+.-.... ....+ ......++.+.+.|++||++++..
T Consensus 246 ~~~~~-~g~g~Dvvid~~g~~~~~~~~~~~~--~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 246 IDQIL-GKPEVDCGVDAVGFEAHGLGDEANT--ETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp HHHHH-SSSCEEEEEECSCTTCBCSGGGTTS--BCTTHHHHHHHHHEEEEEEEECCS
T ss_pred HHHHh-CCCCCCEEEECCCCccccccccccc--cccHHHHHHHHHHHhcCCEEEEec
Confidence 22221 1225999988754210000 00000 001246888999999999997654
No 314
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=97.32 E-value=0.00063 Score=59.43 Aligned_cols=97 Identities=13% Similarity=0.084 Sum_probs=68.7
Q ss_pred HHhhhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhh
Q 041272 87 VWKHVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRME 165 (267)
Q Consensus 87 l~~~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~ 165 (267)
+....+++|++||-+|+|. |..+..+|+..| ++|+++|.+++..+.+++ .| ... ++ .+...+
T Consensus 169 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-----a~Vi~~~~~~~~~~~~~~----lG----a~~--v~-~~~~~~- 231 (348)
T 3two_A 169 LKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMG-----AEVSVFARNEHKKQDALS----MG----VKH--FY-TDPKQC- 231 (348)
T ss_dssp HHHTTCCTTCEEEEESCSHHHHHHHHHHHHTT-----CEEEEECSSSTTHHHHHH----TT----CSE--EE-SSGGGC-
T ss_pred HHhcCCCCCCEEEEECCcHHHHHHHHHHHHCC-----CeEEEEeCCHHHHHHHHh----cC----CCe--ec-CCHHHH-
Confidence 3344678999999999987 888889998864 699999999998888865 22 111 12 222222
Q ss_pred hcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 166 EIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 166 ~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.. .+|+++-..+. ...++.+.+.|+|||++++...
T Consensus 232 ---~~--~~D~vid~~g~---------------~~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 232 ---KE--ELDFIISTIPT---------------HYDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp ---CS--CEEEEEECCCS---------------CCCHHHHHTTEEEEEEEEECCC
T ss_pred ---hc--CCCEEEECCCc---------------HHHHHHHHHHHhcCCEEEEECC
Confidence 11 68999877432 1357888999999999987644
No 315
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.30 E-value=0.00054 Score=59.46 Aligned_cols=62 Identities=11% Similarity=0.089 Sum_probs=51.1
Q ss_pred hHHHHhhHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcc
Q 041272 79 LITIAANGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTT 146 (267)
Q Consensus 79 ~~~~~~~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~ 146 (267)
....+...++...-.+|+.|||..||+|..+....+. +.+.+|+|+++..++.|+++++..+
T Consensus 237 kp~~l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~------gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 237 FPAKLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERE------SRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp CCTHHHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred CCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc------CCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 3445666666656678999999999999988887765 5799999999999999999987754
No 316
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=97.27 E-value=0.0013 Score=57.54 Aligned_cols=102 Identities=16% Similarity=0.127 Sum_probs=67.8
Q ss_pred hhhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecC-----hh
Q 041272 89 KHVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMC-----HS 162 (267)
Q Consensus 89 ~~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~-----~~ 162 (267)
...+++|++||-+|+|. |..+..+|+..| ++|+++|.+++..+.+++ .+ .. ..+... ..
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-----a~Vi~~~~~~~~~~~~~~----lG----a~--~~~~~~~~~~~~~ 227 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAYG-----AFVVCTARSPRRLEVAKN----CG----AD--VTLVVDPAKEEES 227 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTT-----CEEEEEESCHHHHHHHHH----TT----CS--EEEECCTTTSCHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-----CEEEEEcCCHHHHHHHHH----hC----CC--EEEcCcccccHHH
Confidence 34578999999999876 788888888764 579999999998888764 22 11 112111 11
Q ss_pred hhhhcCC--CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 163 RMEEIVP--KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 163 ~l~~~~~--~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+.+... ....+|+++.+.+. ...++.+.+.|++||+++....
T Consensus 228 ~i~~~~~~~~g~g~D~vid~~g~---------------~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 228 SIIERIRSAIGDLPNVTIDCSGN---------------EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp HHHHHHHHHSSSCCSEEEECSCC---------------HHHHHHHHHHSCTTCEEEECSC
T ss_pred HHHHHhccccCCCCCEEEECCCC---------------HHHHHHHHHHHhcCCEEEEEec
Confidence 2222111 01258888877432 3468888999999999976543
No 317
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=97.24 E-value=0.0037 Score=54.28 Aligned_cols=105 Identities=19% Similarity=0.199 Sum_probs=69.6
Q ss_pred HHhhhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChh---
Q 041272 87 VWKHVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHS--- 162 (267)
Q Consensus 87 l~~~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~--- 162 (267)
.....++++++||=.|+|. |..+..+|+..+. ..++++|.+++.++.+++. | -...+.....
T Consensus 153 ~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~----~~vi~~~~~~~k~~~a~~l----G------a~~~i~~~~~~~~ 218 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIGAGTIGLLAIQCAVALGA----KSVTAIDISSEKLALAKSF----G------AMQTFNSSEMSAP 218 (346)
T ss_dssp HHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTC----SEEEEEESCHHHHHHHHHT----T------CSEEEETTTSCHH
T ss_pred HHHhccCCCCEEEEECCCCcchHHHHHHHHcCC----cEEEEEechHHHHHHHHHc----C------CeEEEeCCCCCHH
Confidence 3344578999999999987 7778888888753 5789999999988888762 2 1122221111
Q ss_pred hhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 163 RMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 163 ~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+..........+|+++...+. ...++.+.+.|++||.+++...
T Consensus 219 ~~~~~~~~~~g~d~v~d~~G~---------------~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 219 QMQSVLRELRFNQLILETAGV---------------PQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp HHHHHHGGGCSSEEEEECSCS---------------HHHHHHHHHHCCTTCEEEECCC
T ss_pred HHHHhhcccCCcccccccccc---------------cchhhhhhheecCCeEEEEEec
Confidence 121122222346777766332 4678889999999999987543
No 318
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=97.23 E-value=0.0013 Score=57.27 Aligned_cols=100 Identities=19% Similarity=0.271 Sum_probs=69.9
Q ss_pred hcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecCh---hhhhh
Q 041272 91 VVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCH---SRMEE 166 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~---~~l~~ 166 (267)
.++++++||-+|+|. |..+..+|+..+ +.+|+++|.+++..+.+++. | .. .++.... +.+.+
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g----~~~Vi~~~~~~~~~~~~~~l----G----a~--~~i~~~~~~~~~v~~ 233 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS----AARVIAVDLDDDRLALAREV----G----AD--AAVKSGAGAADAIRE 233 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC----CCEEEEEESCHHHHHHHHHT----T----CS--EEEECSTTHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC----CCEEEEEcCCHHHHHHHHHc----C----CC--EEEcCCCcHHHHHHH
Confidence 578999999999987 888899998874 37999999999998888652 2 11 1121111 11222
Q ss_pred cCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 167 IVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 167 ~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.. ....+|+++-..+. ...++.+.+.|++||++++...
T Consensus 234 ~t-~g~g~d~v~d~~G~---------------~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 234 LT-GGQGATAVFDFVGA---------------QSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp HH-GGGCEEEEEESSCC---------------HHHHHHHHHHEEEEEEEEECSC
T ss_pred Hh-CCCCCeEEEECCCC---------------HHHHHHHHHHHhcCCEEEEECC
Confidence 11 12268999887543 3588999999999999987643
No 319
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=97.23 E-value=0.0015 Score=57.86 Aligned_cols=101 Identities=18% Similarity=0.140 Sum_probs=68.8
Q ss_pred hh-cCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecC---hhhh
Q 041272 90 HV-VRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMC---HSRM 164 (267)
Q Consensus 90 ~~-l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~---~~~l 164 (267)
.. +++|++||-+|+|. |..+..+|+..|. .+|+++|.+++.++.+++ .+ .. .++... ..++
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga----~~Vi~~~~~~~~~~~~~~----lG----a~--~vi~~~~~~~~~~ 255 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLGLFGVVIARSLGA----ENVIVIAGSPNRLKLAEE----IG----AD--LTLNRRETSVEER 255 (380)
T ss_dssp CSSCCBTCEEEEECCSHHHHHHHHHHHHTTB----SEEEEEESCHHHHHHHHH----TT----CS--EEEETTTSCHHHH
T ss_pred cCCCCCCCEEEEECcCHHHHHHHHHHHHcCC----ceEEEEcCCHHHHHHHHH----cC----Cc--EEEeccccCcchH
Confidence 35 77899999999876 8888888888641 599999999998888764 22 11 122222 2222
Q ss_pred ----hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 165 ----EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 165 ----~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+.. ....+|+++-+.+. ...++.+.+.|++||+++....
T Consensus 256 ~~~v~~~~-~g~g~Dvvid~~g~---------------~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 256 RKAIMDIT-HGRGADFILEATGD---------------SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp HHHHHHHT-TTSCEEEEEECSSC---------------TTHHHHHHHHEEEEEEEEECCC
T ss_pred HHHHHHHh-CCCCCcEEEECCCC---------------HHHHHHHHHHHhcCCEEEEEec
Confidence 2222 22359999887532 2467888999999999976544
No 320
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=97.22 E-value=0.0016 Score=57.12 Aligned_cols=104 Identities=19% Similarity=0.143 Sum_probs=71.1
Q ss_pred hhhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEe--cChhhhh
Q 041272 89 KHVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFN--MCHSRME 165 (267)
Q Consensus 89 ~~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~--~~~~~l~ 165 (267)
...+++|++||-+|+|. |..+..+|+..|. .+|+++|.+++..+.+++. .. .-+.... .+..++.
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga----~~Vi~~~~~~~~~~~a~~l-~~-------~~~~~~~~~~~~~~~~ 241 (363)
T 3m6i_A 174 RAGVRLGDPVLICGAGPIGLITMLCAKAAGA----CPLVITDIDEGRLKFAKEI-CP-------EVVTHKVERLSAEESA 241 (363)
T ss_dssp HHTCCTTCCEEEECCSHHHHHHHHHHHHTTC----CSEEEEESCHHHHHHHHHH-CT-------TCEEEECCSCCHHHHH
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCC----CEEEEECCCHHHHHHHHHh-ch-------hcccccccccchHHHH
Confidence 34578999999999987 8888999998752 3499999999999999875 21 1112111 1112222
Q ss_pred ----hcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 166 ----EIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 166 ----~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+.. ....+|+++-..+. ...++.+.+.|++||++++...
T Consensus 242 ~~v~~~t-~g~g~Dvvid~~g~---------------~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 242 KKIVESF-GGIEPAVALECTGV---------------ESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp HHHHHHT-SSCCCSEEEECSCC---------------HHHHHHHHHHSCTTCEEEECCC
T ss_pred HHHHHHh-CCCCCCEEEECCCC---------------hHHHHHHHHHhcCCCEEEEEcc
Confidence 222 12358888877432 3578899999999999987644
No 321
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.18 E-value=0.0062 Score=52.86 Aligned_cols=75 Identities=15% Similarity=0.100 Sum_probs=53.5
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCcE
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTAV 174 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~ 174 (267)
+.+|+|+.||.|.+++.+.+. | ...|.++|+++.+++..+.|..... .+|..++..... ..+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G----~~~v~~~e~d~~a~~t~~~N~~~~~-----------~~Di~~~~~~~~--~~~ 72 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-G----AECVYSNEWDKYAQEVYEMNFGEKP-----------EGDITQVNEKTI--PDH 72 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-T----CEEEEEECCCHHHHHHHHHHHSCCC-----------BSCGGGSCGGGS--CCC
T ss_pred CCcEEEECCCcCHHHHHHHHC-C----CeEEEEEeCCHHHHHHHHHHcCCCC-----------cCCHHHcCHhhC--CCC
Confidence 469999999999999998876 2 2468899999999999888864311 334433322111 148
Q ss_pred EEEEEeCCCCCCC
Q 041272 175 RLVAFNLGYLPGG 187 (267)
Q Consensus 175 d~ii~~~~~lp~~ 187 (267)
|+++.+++.=+++
T Consensus 73 D~l~~gpPCQ~fS 85 (327)
T 2c7p_A 73 DILCAGFPCQAFS 85 (327)
T ss_dssp SEEEEECCCTTTC
T ss_pred CEEEECCCCCCcc
Confidence 9999998875554
No 322
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.18 E-value=0.00096 Score=57.79 Aligned_cols=63 Identities=14% Similarity=0.170 Sum_probs=50.4
Q ss_pred hhHHHHhhHHHhhhcCCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCCh---HHHHHHHHHHhhcc
Q 041272 78 TLITIAANGVWKHVVRKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQS---EALKSTSSLLDKTT 146 (267)
Q Consensus 78 ~~~~~~~~~l~~~~l~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~---~~i~~a~~~~~~~~ 146 (267)
.....+...++...-.+|+.|||..||+|..+....+. +.+.+|+|+++ ..++.|++++++.+
T Consensus 226 ~kp~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~------~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 226 QKPAAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQE------GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CCCHHHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHH------TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCHHHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHc------CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 44566677777666778999999999999999888876 57999999999 99999999987644
No 323
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.16 E-value=0.0011 Score=59.38 Aligned_cols=61 Identities=11% Similarity=0.164 Sum_probs=49.0
Q ss_pred cCCCCEEEEecCCCChHHHHHH-HhcCCCCCCcEEEEEeCChHHHHHHHHHHhh--ccccccc-cceEEEe
Q 041272 92 VRKGDTVVDATCGNGYDTLMML-KMVADESSAGCVYGLDIQSEALKSTSSLLDK--TTSKAEK-GLVKLFN 158 (267)
Q Consensus 92 l~~~~~VLDlGcG~G~~~~~la-~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~--~~~~~~~-~~v~~~~ 158 (267)
++++..|+|+|++.|..+..++ +..+. .++|+++|.++...+..++|++. ++ .. .++++++
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~---~~~V~afEP~p~~~~~L~~n~~~~~N~---~~~~~v~~~~ 288 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGK---FERVWMIEPDRINLQTLQNVLRRYTDT---NFASRITVHG 288 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSC---CSEEEEECCCHHHHHHHHHHHHHTTTS---TTGGGEEEEC
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCC---CCEEEEEcCCHHHHHHHHHHHHhhhcc---CCCCCEEEEE
Confidence 4688999999999999999988 45432 37999999999999999999987 32 13 5666654
No 324
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=97.14 E-value=0.0011 Score=52.81 Aligned_cols=98 Identities=18% Similarity=0.205 Sum_probs=63.4
Q ss_pred hcCCCCEEEEecC--CCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecCh----hhh
Q 041272 91 VVRKGDTVVDATC--GNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCH----SRM 164 (267)
Q Consensus 91 ~l~~~~~VLDlGc--G~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~----~~l 164 (267)
.++++++||..|+ |.|..+..+++.. +.+|+++|.+++..+.+++ .+ ... .+.... ..+
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G~~V~~~~~~~~~~~~~~~----~g----~~~--~~d~~~~~~~~~~ 99 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMI-----GARIYTTAGSDAKREMLSR----LG----VEY--VGDSRSVDFADEI 99 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHH-----TCEEEEEESSHHHHHHHHT----TC----CSE--EEETTCSTHHHHH
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHH----cC----CCE--EeeCCcHHHHHHH
Confidence 5778999999995 3366667777665 3689999999988776654 22 111 111111 122
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+... ...+|+++.+.+. ..++.+.+.|+|||+++....
T Consensus 100 ~~~~~-~~~~D~vi~~~g~----------------~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 100 LELTD-GYGVDVVLNSLAG----------------EAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp HHHTT-TCCEEEEEECCCT----------------HHHHHHHHTEEEEEEEEECSC
T ss_pred HHHhC-CCCCeEEEECCch----------------HHHHHHHHHhccCCEEEEEcC
Confidence 22221 2359999987431 467889999999999977543
No 325
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=97.13 E-value=0.0017 Score=56.54 Aligned_cols=98 Identities=21% Similarity=0.165 Sum_probs=66.9
Q ss_pred hhhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh----
Q 041272 89 KHVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR---- 163 (267)
Q Consensus 89 ~~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~---- 163 (267)
...++++++||-+|+|. |..+..+|+.. +.+|+++|.+++.++.+++ .+ .. .++.....+
T Consensus 159 ~~~~~~g~~VlV~GaG~vG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~----lG----a~--~~~d~~~~~~~~~ 223 (339)
T 1rjw_A 159 VTGAKPGEWVAIYGIGGLGHVAVQYAKAM-----GLNVVAVDIGDEKLELAKE----LG----AD--LVVNPLKEDAAKF 223 (339)
T ss_dssp HHTCCTTCEEEEECCSTTHHHHHHHHHHT-----TCEEEEECSCHHHHHHHHH----TT----CS--EEECTTTSCHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHH----CC----CC--EEecCCCccHHHH
Confidence 34578999999999975 77888888876 3699999999998888764 22 11 112111111
Q ss_pred hhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 164 MEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 164 l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
+.+.. ..+|+++.+.+. ...++.+.+.|++||+++...
T Consensus 224 ~~~~~---~~~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 224 MKEKV---GGVHAAVVTAVS---------------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp HHHHH---SSEEEEEESSCC---------------HHHHHHHHHHEEEEEEEEECC
T ss_pred HHHHh---CCCCEEEECCCC---------------HHHHHHHHHHhhcCCEEEEec
Confidence 22221 258999887532 357888899999999997653
No 326
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=97.11 E-value=0.0027 Score=56.07 Aligned_cols=100 Identities=18% Similarity=0.181 Sum_probs=69.0
Q ss_pred hhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecC--hh----
Q 041272 90 HVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMC--HS---- 162 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~--~~---- 162 (267)
..+++|++||-+|+|. |..+..+|+..|. .+|+++|.+++.++.+++. | .. .++... ..
T Consensus 189 ~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga----~~Vi~~~~~~~~~~~a~~l----G----a~--~vi~~~~~~~~~~~ 254 (378)
T 3uko_A 189 AKVEPGSNVAIFGLGTVGLAVAEGAKTAGA----SRIIGIDIDSKKYETAKKF----G----VN--EFVNPKDHDKPIQE 254 (378)
T ss_dssp TCCCTTCCEEEECCSHHHHHHHHHHHHHTC----SCEEEECSCTTHHHHHHTT----T----CC--EEECGGGCSSCHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC----CeEEEEcCCHHHHHHHHHc----C----Cc--EEEccccCchhHHH
Confidence 3577899999999986 8888999998752 4899999999998887652 2 11 122111 11
Q ss_pred hhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCC-cEEEEEEe
Q 041272 163 RMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPG-GLISMVVY 220 (267)
Q Consensus 163 ~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 220 (267)
.+.+... . .+|+++-..+. ...++.+.+.|++| |++++...
T Consensus 255 ~i~~~~~-g-g~D~vid~~g~---------------~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 255 VIVDLTD-G-GVDYSFECIGN---------------VSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp HHHHHTT-S-CBSEEEECSCC---------------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred HHHHhcC-C-CCCEEEECCCC---------------HHHHHHHHHHhhccCCEEEEEcc
Confidence 1222222 2 68888877432 36789999999997 99987543
No 327
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=97.10 E-value=0.0036 Score=54.37 Aligned_cols=104 Identities=20% Similarity=0.171 Sum_probs=67.2
Q ss_pred hhhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecCh-hhhhh
Q 041272 89 KHVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCH-SRMEE 166 (267)
Q Consensus 89 ~~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~-~~l~~ 166 (267)
...+++|++||=+|+|+ |.++..+++..+ +.+|+++|.+++.++.+++.-.. .-+.....+. +.+.+
T Consensus 158 ~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~----g~~Vi~~~~~~~r~~~~~~~Ga~-------~~i~~~~~~~~~~v~~ 226 (348)
T 4eez_A 158 VSGVKPGDWQVIFGAGGLGNLAIQYAKNVF----GAKVIAVDINQDKLNLAKKIGAD-------VTINSGDVNPVDEIKK 226 (348)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTS----CCEEEEEESCHHHHHHHHHTTCS-------EEEEC-CCCHHHHHHH
T ss_pred ccCCCCCCEEEEEcCCCccHHHHHHHHHhC----CCEEEEEECcHHHhhhhhhcCCe-------EEEeCCCCCHHHHhhh
Confidence 34578999999999987 566677776654 47999999999988777653211 1111111111 12222
Q ss_pred cCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 167 IVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 167 ~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.. ....+|.++.+.+. ...+..+.+.|+++|.+++..
T Consensus 227 ~t-~g~g~d~~~~~~~~---------------~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 227 IT-GGLGVQSAIVCAVA---------------RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp HT-TSSCEEEEEECCSC---------------HHHHHHHHHTEEEEEEEEECC
T ss_pred hc-CCCCceEEEEeccC---------------cchhheeheeecCCceEEEEe
Confidence 22 23357877776322 467889999999999997654
No 328
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=97.07 E-value=0.003 Score=56.15 Aligned_cols=114 Identities=15% Similarity=0.183 Sum_probs=71.3
Q ss_pred hhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecCh-----hh
Q 041272 90 HVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCH-----SR 163 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~-----~~ 163 (267)
..+++|++||-+|+|. |..+..+|+..|. .+|+++|.+++.++.+++ .| . +.+.... ..
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga----~~Vi~~~~~~~~~~~a~~----lG-----a--~~i~~~~~~~~~~~ 245 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLGA----AVVIVGDLNPARLAHAKA----QG-----F--EIADLSLDTPLHEQ 245 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTC----SEEEEEESCHHHHHHHHH----TT-----C--EEEETTSSSCHHHH
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCC----CeEEEEcCCHHHHHHHHH----cC-----C--cEEccCCcchHHHH
Confidence 4578999999999987 8889999998752 489999999999888865 23 1 1222111 12
Q ss_pred hhhcCCCCCcEEEEEEeCCCCCCC-CCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 164 MEEIVPKSTAVRLVAFNLGYLPGG-DKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 164 l~~~~~~~~~~d~ii~~~~~lp~~-d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+.+.. ....+|+++-..+.-... .....+ .+.+...++.+.+.|++||++++...
T Consensus 246 v~~~t-~g~g~Dvvid~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 246 IAALL-GEPEVDCAVDAVGFEARGHGHEGAK-HEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp HHHHH-SSSCEEEEEECCCTTCBCSSTTGGG-SBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred HHHHh-CCCCCCEEEECCCCccccccccccc-ccchHHHHHHHHHHHhcCCEEEEecc
Confidence 22221 123599998875431100 000001 11223578899999999999976543
No 329
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=97.07 E-value=0.0015 Score=57.43 Aligned_cols=99 Identities=19% Similarity=0.145 Sum_probs=68.2
Q ss_pred hhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhh----
Q 041272 90 HVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRM---- 164 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l---- 164 (267)
..+++|++||-+|+|. |..+..+|+..| ++|+++|.+++.++.+++. | .. .++..+..++
T Consensus 185 ~~~~~g~~VlV~G~G~vG~~a~qla~~~G-----a~Vi~~~~~~~~~~~~~~l----G----a~--~vi~~~~~~~~~~v 249 (363)
T 3uog_A 185 GHLRAGDRVVVQGTGGVALFGLQIAKATG-----AEVIVTSSSREKLDRAFAL----G----AD--HGINRLEEDWVERV 249 (363)
T ss_dssp TCCCTTCEEEEESSBHHHHHHHHHHHHTT-----CEEEEEESCHHHHHHHHHH----T----CS--EEEETTTSCHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-----CEEEEEecCchhHHHHHHc----C----CC--EEEcCCcccHHHHH
Confidence 4577999999999887 888888888763 6999999999988887652 2 11 1222111222
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+.. .+..+|+++-+.+- ..++.+.+.|++||++++...
T Consensus 250 ~~~~-~g~g~D~vid~~g~----------------~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 250 YALT-GDRGADHILEIAGG----------------AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp HHHH-TTCCEEEEEEETTS----------------SCHHHHHHHEEEEEEEEEECC
T ss_pred HHHh-CCCCceEEEECCCh----------------HHHHHHHHHhhcCCEEEEEec
Confidence 2222 22369999888541 356788899999999987654
No 330
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.03 E-value=0.0043 Score=53.16 Aligned_cols=113 Identities=17% Similarity=0.147 Sum_probs=62.3
Q ss_pred CEEEEecCCCChHHHHHHH---hcCCCCCCc--EEEEEeCCh--------HHHHHHHHHHhhccccccccc--eEEEecC
Q 041272 96 DTVVDATCGNGYDTLMMLK---MVADESSAG--CVYGLDIQS--------EALKSTSSLLDKTTSKAEKGL--VKLFNMC 160 (267)
Q Consensus 96 ~~VLDlGcG~G~~~~~la~---~~~~~~p~~--~v~giD~s~--------~~i~~a~~~~~~~~~~~~~~~--v~~~~~~ 160 (267)
-+|||+|-|+|...+...+ ..+ |.. +++++|..+ +......+.+..........+ +++..+|
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~---~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVN---PKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHC---TTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhC---CCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 4899999999987644332 222 233 567777532 111221222211110011233 3566777
Q ss_pred hhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 161 HSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 161 ~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
..+....+. +..+|+++.|. +-|.....+. ..++++.++++++|||.+ ++|
T Consensus 175 a~~~l~~l~-~~~~Da~flDg-FsP~kNPeLW-----s~e~f~~l~~~~~pgg~l--aTY 225 (308)
T 3vyw_A 175 ARKRIKEVE-NFKADAVFHDA-FSPYKNPELW-----TLDFLSLIKERIDEKGYW--VSY 225 (308)
T ss_dssp HHHHGGGCC-SCCEEEEEECC-SCTTTSGGGG-----SHHHHHHHHTTEEEEEEE--EES
T ss_pred HHHHHhhhc-ccceeEEEeCC-CCcccCcccC-----CHHHHHHHHHHhCCCcEE--EEE
Confidence 765444332 34799999993 2222211111 168999999999999998 455
No 331
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=97.01 E-value=0.0047 Score=54.36 Aligned_cols=100 Identities=14% Similarity=0.122 Sum_probs=68.3
Q ss_pred hhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecC-----h-h
Q 041272 90 HVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMC-----H-S 162 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~-----~-~ 162 (267)
..+++|++||-+|+|. |..+..+|+..+. .+|+++|.+++..+.+++ .+ .. .++... . +
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga----~~Vi~~~~~~~~~~~a~~----lG----a~--~vi~~~~~~~~~~~ 252 (373)
T 1p0f_A 187 AKVTPGSTCAVFGLGGVGFSAIVGCKAAGA----SRIIGVGTHKDKFPKAIE----LG----AT--ECLNPKDYDKPIYE 252 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHTC----SEEEEECSCGGGHHHHHH----TT----CS--EEECGGGCSSCHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC----CeEEEECCCHHHHHHHHH----cC----Cc--EEEecccccchHHH
Confidence 3577899999999987 8888899988742 489999999998888865 22 11 112111 1 1
Q ss_pred hhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCC-cEEEEEEe
Q 041272 163 RMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPG-GLISMVVY 220 (267)
Q Consensus 163 ~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 220 (267)
.+.+... . .+|+++-..+. ...++.+.+.|++| |++++...
T Consensus 253 ~i~~~t~-g-g~Dvvid~~g~---------------~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 253 VICEKTN-G-GVDYAVECAGR---------------IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp HHHHHTT-S-CBSEEEECSCC---------------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred HHHHHhC-C-CCCEEEECCCC---------------HHHHHHHHHHHhcCCCEEEEEcc
Confidence 1222222 2 68888877432 36788999999999 99976543
No 332
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=97.01 E-value=0.003 Score=55.59 Aligned_cols=100 Identities=14% Similarity=0.184 Sum_probs=67.4
Q ss_pred hhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecC-----h-h
Q 041272 90 HVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMC-----H-S 162 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~-----~-~ 162 (267)
..+++|++||-+|+|. |..+..+|+..+. .+|+++|.+++.++.+++. + .. .++... . +
T Consensus 188 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga----~~Vi~~~~~~~~~~~~~~l----G----a~--~vi~~~~~~~~~~~ 253 (374)
T 1cdo_A 188 AKVEPGSTCAVFGLGAVGLAAVMGCHSAGA----KRIIAVDLNPDKFEKAKVF----G----AT--DFVNPNDHSEPISQ 253 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTC----SEEEEECSCGGGHHHHHHT----T----CC--EEECGGGCSSCHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC----CEEEEEcCCHHHHHHHHHh----C----Cc--eEEeccccchhHHH
Confidence 3577899999999876 8888888888642 3899999999998888642 2 11 112111 1 1
Q ss_pred hhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCC-cEEEEEEe
Q 041272 163 RMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPG-GLISMVVY 220 (267)
Q Consensus 163 ~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 220 (267)
.+.+... ..+|+++-..+. ...++.+.+.|++| |++++...
T Consensus 254 ~~~~~~~--~g~D~vid~~g~---------------~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 254 VLSKMTN--GGVDFSLECVGN---------------VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp HHHHHHT--SCBSEEEECSCC---------------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred HHHHHhC--CCCCEEEECCCC---------------HHHHHHHHHHhhcCCcEEEEEcC
Confidence 1122211 258888877432 35788999999999 99976543
No 333
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.99 E-value=0.003 Score=55.65 Aligned_cols=99 Identities=20% Similarity=0.223 Sum_probs=66.9
Q ss_pred hhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecC-----h-h
Q 041272 90 HVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMC-----H-S 162 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~-----~-~ 162 (267)
..+++|++||-+|+|. |..+..+|+..+. .+|+++|.+++..+.+++. + .. .++... . +
T Consensus 191 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga----~~Vi~~~~~~~~~~~a~~l----G----a~--~vi~~~~~~~~~~~ 256 (376)
T 1e3i_A 191 AKVTPGSTCAVFGLGCVGLSAIIGCKIAGA----SRIIAIDINGEKFPKAKAL----G----AT--DCLNPRELDKPVQD 256 (376)
T ss_dssp SCCCTTCEEEEECCSHHHHHHHHHHHHTTC----SEEEEECSCGGGHHHHHHT----T----CS--EEECGGGCSSCHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC----CeEEEEcCCHHHHHHHHHh----C----Cc--EEEccccccchHHH
Confidence 3567899999999886 8888889988642 4899999999988887642 2 11 112111 1 1
Q ss_pred hhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCC-cEEEEEE
Q 041272 163 RMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPG-GLISMVV 219 (267)
Q Consensus 163 ~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~ 219 (267)
.+.+... . .+|+++-..+. ...++.+.+.|++| |++++..
T Consensus 257 ~v~~~~~-~-g~Dvvid~~G~---------------~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 257 VITELTA-G-GVDYSLDCAGT---------------AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp HHHHHHT-S-CBSEEEESSCC---------------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HHHHHhC-C-CccEEEECCCC---------------HHHHHHHHHHhhcCCCEEEEEC
Confidence 1222211 2 58888877432 36788999999999 9997653
No 334
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.98 E-value=0.0031 Score=54.37 Aligned_cols=98 Identities=15% Similarity=0.166 Sum_probs=66.9
Q ss_pred hcCCCCEEEEec-CCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh----h
Q 041272 91 VVRKGDTVVDAT-CGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR----M 164 (267)
Q Consensus 91 ~l~~~~~VLDlG-cG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~----l 164 (267)
.+++|++||-.| +|. |..+..+++..| ++|+++|.+++.++.+++. + .. ..+.....+ +
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G-----a~Vi~~~~~~~~~~~~~~~----G----a~--~~~~~~~~~~~~~~ 201 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALG-----AKLIGTVSSPEKAAHAKAL----G----AW--ETIDYSHEDVAKRV 201 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT-----CEEEEEESSHHHHHHHHHH----T----CS--EEEETTTSCHHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCC-----CEEEEEeCCHHHHHHHHHc----C----CC--EEEeCCCccHHHHH
Confidence 467899999999 454 888888888764 6999999999988888752 2 11 112211112 2
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+.. ....+|+++.+.+. ..+..+.+.|++||++++...
T Consensus 202 ~~~~-~~~g~Dvvid~~g~----------------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 202 LELT-DGKKCPVVYDGVGQ----------------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp HHHT-TTCCEEEEEESSCG----------------GGHHHHHTTEEEEEEEEECCC
T ss_pred HHHh-CCCCceEEEECCCh----------------HHHHHHHHHhcCCCEEEEEec
Confidence 2222 22369999887432 467788999999999987654
No 335
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.94 E-value=0.0032 Score=54.72 Aligned_cols=99 Identities=10% Similarity=0.115 Sum_probs=66.0
Q ss_pred hhcCCCCEEEEecCCC--ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh----
Q 041272 90 HVVRKGDTVVDATCGN--GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR---- 163 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~--G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~---- 163 (267)
..+++|++||-.|+|+ |..+..+++..| ++|+++|.+++.++.+++. + .. ..+.....+
T Consensus 140 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G-----a~Vi~~~~~~~~~~~~~~l----g----a~--~~~~~~~~~~~~~ 204 (340)
T 3gms_A 140 LNLQRNDVLLVNACGSAIGHLFAQLSQILN-----FRLIAVTRNNKHTEELLRL----G----AA--YVIDTSTAPLYET 204 (340)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT-----CEEEEEESSSTTHHHHHHH----T----CS--EEEETTTSCHHHH
T ss_pred cccCCCCEEEEeCCccHHHHHHHHHHHHcC-----CEEEEEeCCHHHHHHHHhC----C----Cc--EEEeCCcccHHHH
Confidence 4578999999999984 788888888764 6999999999988888762 2 11 112111112
Q ss_pred hhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 164 MEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 164 l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+.+.. ....+|+++.+.+. ....++.+.|++||+++....
T Consensus 205 ~~~~~-~~~g~Dvvid~~g~----------------~~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 205 VMELT-NGIGADAAIDSIGG----------------PDGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp HHHHT-TTSCEEEEEESSCH----------------HHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHh-CCCCCcEEEECCCC----------------hhHHHHHHHhcCCCEEEEEee
Confidence 22222 22369999887432 233445589999999987654
No 336
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.93 E-value=0.0025 Score=55.57 Aligned_cols=99 Identities=16% Similarity=0.141 Sum_probs=66.2
Q ss_pred hhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh----h
Q 041272 90 HVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR----M 164 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~----l 164 (267)
..+ +|++||-+|+|. |..+..+|+..|. .+|+++|.+++.++.+++. + .. .++.....+ +
T Consensus 164 ~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga----~~Vi~~~~~~~~~~~~~~~----G----a~--~~~~~~~~~~~~~v 228 (348)
T 2d8a_A 164 GPI-SGKSVLITGAGPLGLLGIAVAKASGA----YPVIVSEPSDFRRELAKKV----G----AD--YVINPFEEDVVKEV 228 (348)
T ss_dssp SCC-TTCCEEEECCSHHHHHHHHHHHHTTC----CSEEEECSCHHHHHHHHHH----T----CS--EEECTTTSCHHHHH
T ss_pred cCC-CCCEEEEECCCHHHHHHHHHHHHcCC----CEEEEECCCHHHHHHHHHh----C----CC--EEECCCCcCHHHHH
Confidence 346 899999999975 7788888887642 3899999999888877642 2 11 112211112 2
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.+.. ....+|+++...+. ...++.+.+.|++||+++...
T Consensus 229 ~~~~-~g~g~D~vid~~g~---------------~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 229 MDIT-DGNGVDVFLEFSGA---------------PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp HHHT-TTSCEEEEEECSCC---------------HHHHHHHHHHEEEEEEEEECC
T ss_pred HHHc-CCCCCCEEEECCCC---------------HHHHHHHHHHHhcCCEEEEEc
Confidence 2222 12359999887532 367888899999999997654
No 337
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.91 E-value=0.0062 Score=53.50 Aligned_cols=99 Identities=17% Similarity=0.194 Sum_probs=67.5
Q ss_pred hhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecC-----h-h
Q 041272 90 HVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMC-----H-S 162 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~-----~-~ 162 (267)
..+++|++||-+|+|. |..+..+|+..+. .+|+++|.+++..+.+++. + .. .++... . .
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~avqla~~~Ga----~~Vi~~~~~~~~~~~~~~l----G----a~--~vi~~~~~~~~~~~ 251 (373)
T 2fzw_A 186 AKLEPGSVCAVFGLGGVGLAVIMGCKVAGA----SRIIGVDINKDKFARAKEF----G----AT--ECINPQDFSKPIQE 251 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHTC----SEEEEECSCGGGHHHHHHH----T----CS--EEECGGGCSSCHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC----CeEEEEcCCHHHHHHHHHc----C----Cc--eEeccccccccHHH
Confidence 3567899999999877 8888888988742 3899999999998888652 2 11 112111 1 1
Q ss_pred hhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCC-cEEEEEE
Q 041272 163 RMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPG-GLISMVV 219 (267)
Q Consensus 163 ~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~ 219 (267)
.+.+... . .+|+++-..+. ...++.+.+.|++| |++++..
T Consensus 252 ~v~~~~~-~-g~D~vid~~g~---------------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 252 VLIEMTD-G-GVDYSFECIGN---------------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp HHHHHTT-S-CBSEEEECSCC---------------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HHHHHhC-C-CCCEEEECCCc---------------HHHHHHHHHhhccCCcEEEEEe
Confidence 1222222 2 58888877432 35788999999999 9997654
No 338
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.89 E-value=0.0077 Score=52.97 Aligned_cols=99 Identities=17% Similarity=0.176 Sum_probs=67.1
Q ss_pred hhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecC-----h-h
Q 041272 90 HVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMC-----H-S 162 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~-----~-~ 162 (267)
..+++|++||-+|+|. |..+..+|+..+. .+|+++|.+++.++.+++. + .. .++... . +
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga----~~Vi~~~~~~~~~~~~~~l----G----a~--~vi~~~~~~~~~~~ 252 (374)
T 2jhf_A 187 AKVTQGSTCAVFGLGGVGLSVIMGCKAAGA----ARIIGVDINKDKFAKAKEV----G----AT--ECVNPQDYKKPIQE 252 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTC----SEEEEECSCGGGHHHHHHT----T----CS--EEECGGGCSSCHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC----CeEEEEcCCHHHHHHHHHh----C----Cc--eEecccccchhHHH
Confidence 3577899999999877 8888888888642 3899999999998888642 2 11 112111 1 1
Q ss_pred hhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCC-cEEEEEE
Q 041272 163 RMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPG-GLISMVV 219 (267)
Q Consensus 163 ~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~ 219 (267)
.+.+... . .+|+++-..+. ...++.+.+.|++| |++++..
T Consensus 253 ~~~~~~~-~-g~D~vid~~g~---------------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 253 VLTEMSN-G-GVDFSFEVIGR---------------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp HHHHHTT-S-CBSEEEECSCC---------------HHHHHHHHHHBCTTTCEEEECS
T ss_pred HHHHHhC-C-CCcEEEECCCC---------------HHHHHHHHHHhhcCCcEEEEec
Confidence 1222221 2 58888877432 35788899999999 9997654
No 339
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.85 E-value=0.0031 Score=54.60 Aligned_cols=97 Identities=21% Similarity=0.189 Sum_probs=65.3
Q ss_pred hcCCCCEEEEecC-CC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh----h
Q 041272 91 VVRKGDTVVDATC-GN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR----M 164 (267)
Q Consensus 91 ~l~~~~~VLDlGc-G~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~----l 164 (267)
.+++|++||-.|+ |. |..+..+++.. +++|+++|.+++.++.+++. + .. ..+.....+ +
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~~----g----a~--~~~~~~~~~~~~~~ 209 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMK-----GAHTIAVASTDEKLKIAKEY----G----AE--YLINASKEDILRQV 209 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHHT----T----CS--EEEETTTSCHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHHc----C----Cc--EEEeCCCchHHHHH
Confidence 4678999999994 43 78888888876 46999999999988877652 2 11 112211122 2
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.+.. ....+|+++.+.+. ..++.+.+.|++||+++...
T Consensus 210 ~~~~-~~~g~D~vid~~g~----------------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 210 LKFT-NGKGVDASFDSVGK----------------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp HHHT-TTSCEEEEEECCGG----------------GGHHHHHHHEEEEEEEEECC
T ss_pred HHHh-CCCCceEEEECCCh----------------HHHHHHHHHhccCCEEEEEc
Confidence 2222 22369999887431 46778889999999998754
No 340
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.84 E-value=0.004 Score=54.56 Aligned_cols=101 Identities=13% Similarity=0.135 Sum_probs=66.6
Q ss_pred hhhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChh-hhhh
Q 041272 89 KHVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHS-RMEE 166 (267)
Q Consensus 89 ~~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~-~l~~ 166 (267)
...+++|++||-+|+|. |..+..+|+..| ++|+++|.+++.++.+++ + + .. .++..... ++.+
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~~~qlak~~G-----a~Vi~~~~~~~~~~~~~~-l---G----a~--~v~~~~~~~~~~~ 238 (360)
T 1piw_A 174 RNGCGPGKKVGIVGLGGIGSMGTLISKAMG-----AETYVISRSSRKREDAMK-M---G----AD--HYIATLEEGDWGE 238 (360)
T ss_dssp HTTCSTTCEEEEECCSHHHHHHHHHHHHHT-----CEEEEEESSSTTHHHHHH-H---T----CS--EEEEGGGTSCHHH
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHCC-----CEEEEEcCCHHHHHHHHH-c---C----CC--EEEcCcCchHHHH
Confidence 34678999999999976 888888888764 589999999998888875 2 2 11 12221111 2222
Q ss_pred cCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 167 IVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 167 ~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
... ..+|+++-..+..+ ...++.+.+.|++||+++...
T Consensus 239 ~~~--~~~D~vid~~g~~~-------------~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 239 KYF--DTFDLIVVCASSLT-------------DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp HSC--SCEEEEEECCSCST-------------TCCTTTGGGGEEEEEEEEECC
T ss_pred Hhh--cCCCEEEECCCCCc-------------HHHHHHHHHHhcCCCEEEEec
Confidence 222 36999988753210 023456788999999987643
No 341
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=96.84 E-value=0.0025 Score=54.70 Aligned_cols=91 Identities=14% Similarity=0.011 Sum_probs=61.6
Q ss_pred hhhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc
Q 041272 89 KHVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI 167 (267)
Q Consensus 89 ~~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~ 167 (267)
...+++|++||-+|+|. |..+..+|+..| ++|++++ +++..+.+++ .| . -.++. + ....
T Consensus 137 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G-----a~Vi~~~-~~~~~~~~~~----lG----a--~~v~~-d---~~~v 196 (315)
T 3goh_A 137 KIPLTKQREVLIVGFGAVNNLLTQMLNNAG-----YVVDLVS-ASLSQALAAK----RG----V--RHLYR-E---PSQV 196 (315)
T ss_dssp TSCCCSCCEEEEECCSHHHHHHHHHHHHHT-----CEEEEEC-SSCCHHHHHH----HT----E--EEEES-S---GGGC
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-----CEEEEEE-ChhhHHHHHH----cC----C--CEEEc-C---HHHh
Confidence 34577999999999976 888999998874 6999999 9988888865 22 1 11222 2 2222
Q ss_pred CCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEE
Q 041272 168 VPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMV 218 (267)
Q Consensus 168 ~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 218 (267)
...+|+++-..+. ..+..+.+.|++||+++..
T Consensus 197 ---~~g~Dvv~d~~g~----------------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 197 ---TQKYFAIFDAVNS----------------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp ---CSCEEEEECC-----------------------TTGGGEEEEEEEEEE
T ss_pred ---CCCccEEEECCCc----------------hhHHHHHHHhcCCCEEEEE
Confidence 3468988876422 2336678999999999775
No 342
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.81 E-value=0.0056 Score=53.31 Aligned_cols=101 Identities=19% Similarity=0.219 Sum_probs=67.4
Q ss_pred hhhcCCCCEEEEecCCC--ChHHHHHHHhc-CCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh--
Q 041272 89 KHVVRKGDTVVDATCGN--GYDTLMMLKMV-ADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR-- 163 (267)
Q Consensus 89 ~~~l~~~~~VLDlGcG~--G~~~~~la~~~-~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~-- 163 (267)
...++++++||-.|+|+ |..+..+++.. | .+|+++|.+++.++.+++. + .. .++.....+
T Consensus 165 ~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~G-----a~Vi~~~~~~~~~~~~~~~----g----~~--~~~~~~~~~~~ 229 (347)
T 1jvb_A 165 KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSG-----ATIIGVDVREEAVEAAKRA----G----AD--YVINASMQDPL 229 (347)
T ss_dssp HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTC-----CEEEEEESSHHHHHHHHHH----T----CS--EEEETTTSCHH
T ss_pred hcCCCCCCEEEEECCCccHHHHHHHHHHHcCC-----CeEEEEcCCHHHHHHHHHh----C----CC--EEecCCCccHH
Confidence 34578899999999983 66777777775 4 5899999999988877542 2 11 111111111
Q ss_pred --hhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 164 --MEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 164 --l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+.+.... ..+|+++.+.+. ...++.+.+.|++||+++....
T Consensus 230 ~~~~~~~~~-~~~d~vi~~~g~---------------~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 230 AEIRRITES-KGVDAVIDLNNS---------------EKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp HHHHHHTTT-SCEEEEEESCCC---------------HHHHTTGGGGEEEEEEEEECCS
T ss_pred HHHHHHhcC-CCceEEEECCCC---------------HHHHHHHHHHHhcCCEEEEECC
Confidence 2222221 369999988543 3578888999999999977543
No 343
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.80 E-value=0.0075 Score=52.92 Aligned_cols=94 Identities=10% Similarity=0.086 Sum_probs=65.0
Q ss_pred CCCEEEEec-CCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEec--C-hhhhhhcC
Q 041272 94 KGDTVVDAT-CGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNM--C-HSRMEEIV 168 (267)
Q Consensus 94 ~~~~VLDlG-cG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~--~-~~~l~~~~ 168 (267)
+|++||=.| +|. |..+..+|+..+ +.+|+++|.+++.++.+++ .| .. .++.. + .+.+.+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~----g~~Vi~~~~~~~~~~~~~~----lG----ad--~vi~~~~~~~~~v~~~- 235 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT----DLTVIATASRPETQEWVKS----LG----AH--HVIDHSKPLAAEVAAL- 235 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC----CSEEEEECSSHHHHHHHHH----TT----CS--EEECTTSCHHHHHHTT-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc----CCEEEEEeCCHHHHHHHHH----cC----CC--EEEeCCCCHHHHHHHh-
Confidence 788999998 666 899999998753 3799999999998888865 22 11 11211 1 1122222
Q ss_pred CCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEE
Q 041272 169 PKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMV 218 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 218 (267)
....+|+++-+.+. ...++.+.+.|++||++++.
T Consensus 236 -~~~g~Dvvid~~g~---------------~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 236 -GLGAPAFVFSTTHT---------------DKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp -CSCCEEEEEECSCH---------------HHHHHHHHHHSCTTCEEEEC
T ss_pred -cCCCceEEEECCCc---------------hhhHHHHHHHhcCCCEEEEE
Confidence 23469988877421 35788999999999999865
No 344
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.77 E-value=0.0049 Score=53.64 Aligned_cols=99 Identities=16% Similarity=0.079 Sum_probs=65.4
Q ss_pred hhhcCCCCEEEEecC--CCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecC-hhhh-
Q 041272 89 KHVVRKGDTVVDATC--GNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMC-HSRM- 164 (267)
Q Consensus 89 ~~~l~~~~~VLDlGc--G~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~-~~~l- 164 (267)
...++++++||-.|+ |.|..+..+++.. +.+|+++|.+++..+.+++ .+ .. ..+... ..++
T Consensus 164 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-----Ga~V~~~~~~~~~~~~~~~----~g----~~--~~~d~~~~~~~~ 228 (347)
T 2hcy_A 164 SANLMAGHWVAISGAAGGLGSLAVQYAKAM-----GYRVLGIDGGEGKEELFRS----IG----GE--VFIDFTKEKDIV 228 (347)
T ss_dssp TTTCCTTCEEEEETTTSHHHHHHHHHHHHT-----TCEEEEEECSTTHHHHHHH----TT----CC--EEEETTTCSCHH
T ss_pred hcCCCCCCEEEEECCCchHHHHHHHHHHHC-----CCcEEEEcCCHHHHHHHHH----cC----Cc--eEEecCccHhHH
Confidence 335778999999998 3477777777765 4699999999988777654 22 11 111111 1122
Q ss_pred ---hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 165 ---EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 165 ---~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.+.. .. .+|+++.+.+. ...++.+.+.|++||+++...
T Consensus 229 ~~~~~~~-~~-~~D~vi~~~g~---------------~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 229 GAVLKAT-DG-GAHGVINVSVS---------------EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp HHHHHHH-TS-CEEEEEECSSC---------------HHHHHHHTTSEEEEEEEEECC
T ss_pred HHHHHHh-CC-CCCEEEECCCc---------------HHHHHHHHHHHhcCCEEEEEe
Confidence 1111 12 58999988532 357889999999999997654
No 345
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.74 E-value=0.0058 Score=54.45 Aligned_cols=101 Identities=15% Similarity=0.162 Sum_probs=64.3
Q ss_pred hcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh----hh
Q 041272 91 VVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR----ME 165 (267)
Q Consensus 91 ~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~----l~ 165 (267)
.+++|++||=+|+|. |..+..+|+..|. .+|+++|.+++.++.+++. | --.++.....+ +.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga----~~Vi~~~~~~~~~~~~~~l----G------a~~vi~~~~~~~~~~i~ 275 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGA----SKVILSEPSEVRRNLAKEL----G------ADHVIDPTKENFVEAVL 275 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC----SEEEEECSCHHHHHHHHHH----T------CSEEECTTTSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC----CEEEEECCCHHHHHHHHHc----C------CCEEEcCCCCCHHHHHH
Confidence 477899999999977 8888889988742 4999999999998888753 2 11122211122 22
Q ss_pred hcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcc----cCCcEEEEEEe
Q 041272 166 EIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERIL----IPGGLISMVVY 220 (267)
Q Consensus 166 ~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~L----kpgG~l~i~~~ 220 (267)
+.. ....+|+++-..+. ....+..+.+.| ++||++++...
T Consensus 276 ~~t-~g~g~D~vid~~g~--------------~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 276 DYT-NGLGAKLFLEATGV--------------PQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp HHT-TTCCCSEEEECSSC--------------HHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred HHh-CCCCCCEEEECCCC--------------cHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 222 22358888876432 112444444455 99999987543
No 346
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.72 E-value=0.0076 Score=52.39 Aligned_cols=97 Identities=21% Similarity=0.242 Sum_probs=65.7
Q ss_pred hhcCCCCEEEEecC-CC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhh---
Q 041272 90 HVVRKGDTVVDATC-GN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRM--- 164 (267)
Q Consensus 90 ~~l~~~~~VLDlGc-G~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l--- 164 (267)
..+++|++||-.|+ |. |..+..+++.. +++|++++.+++..+.+++. + ... ++... .++
T Consensus 155 ~~~~~g~~VlV~Gasg~iG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~~----g----a~~--v~~~~-~~~~~~ 218 (342)
T 4eye_A 155 GQLRAGETVLVLGAAGGIGTAAIQIAKGM-----GAKVIAVVNRTAATEFVKSV----G----ADI--VLPLE-EGWAKA 218 (342)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHT-----TCEEEEEESSGGGHHHHHHH----T----CSE--EEESS-TTHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHhc----C----CcE--EecCc-hhHHHH
Confidence 35678999999998 43 88888888876 36999999999988887762 2 111 12211 222
Q ss_pred -hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 165 -EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 165 -~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.+.. ....+|+++.+.+. ..++.+.+.|++||++++..
T Consensus 219 v~~~~-~~~g~Dvvid~~g~----------------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 219 VREAT-GGAGVDMVVDPIGG----------------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp HHHHT-TTSCEEEEEESCC------------------CHHHHHHTEEEEEEEEEC-
T ss_pred HHHHh-CCCCceEEEECCch----------------hHHHHHHHhhcCCCEEEEEE
Confidence 2222 22369999887532 35678889999999998754
No 347
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=96.69 E-value=0.0048 Score=53.97 Aligned_cols=102 Identities=11% Similarity=0.110 Sum_probs=66.2
Q ss_pred hhhcCCC------CEEEEecCCC-ChHH-HHHH-HhcCCCCCCcEEEEEeCChH---HHHHHHHHHhhccccccccceEE
Q 041272 89 KHVVRKG------DTVVDATCGN-GYDT-LMML-KMVADESSAGCVYGLDIQSE---ALKSTSSLLDKTTSKAEKGLVKL 156 (267)
Q Consensus 89 ~~~l~~~------~~VLDlGcG~-G~~~-~~la-~~~~~~~p~~~v~giD~s~~---~i~~a~~~~~~~~~~~~~~~v~~ 156 (267)
...+++| ++||-+|+|. |..+ ..+| +..|. .+|+++|.+++ ..+.+++ .| ...+..
T Consensus 161 ~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga----~~Vi~~~~~~~~~~~~~~~~~----lG----a~~v~~ 228 (357)
T 2b5w_A 161 HAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGY----ENLYCLGRRDRPDPTIDIIEE----LD----ATYVDS 228 (357)
T ss_dssp HHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCC----CEEEEEECCCSSCHHHHHHHH----TT----CEEEET
T ss_pred hcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCC----cEEEEEeCCcccHHHHHHHHH----cC----CcccCC
Confidence 3457788 9999999866 7777 7788 76542 34999999988 7777764 22 111100
Q ss_pred EecChhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 157 FNMCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 157 ~~~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
...+..++.+. .. .+|+++-..+. ...++.+.+.|++||+++....
T Consensus 229 ~~~~~~~i~~~--~g-g~Dvvid~~g~---------------~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 229 RQTPVEDVPDV--YE-QMDFIYEATGF---------------PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp TTSCGGGHHHH--SC-CEEEEEECSCC---------------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CccCHHHHHHh--CC-CCCEEEECCCC---------------hHHHHHHHHHHhcCCEEEEEeC
Confidence 00111112223 22 69999877432 3478889999999999977654
No 348
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.68 E-value=0.004 Score=53.90 Aligned_cols=99 Identities=14% Similarity=0.089 Sum_probs=66.6
Q ss_pred hhcCCCCEEEEecC-C-CChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh----
Q 041272 90 HVVRKGDTVVDATC-G-NGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR---- 163 (267)
Q Consensus 90 ~~l~~~~~VLDlGc-G-~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~---- 163 (267)
..+++|++||-.|+ | .|..+..+++.. +++|+++|.+++.++.+.+.+ + .. ..+.....+
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~~~---g----~~--~~~~~~~~~~~~~ 210 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLK-----GCRVVGIAGGAEKCRFLVEEL---G----FD--GAIDYKNEDLAAG 210 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHHTT---C----CS--EEEETTTSCHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHHHc---C----CC--EEEECCCHHHHHH
Confidence 45789999999998 3 378888888875 469999999998888773322 2 11 112111112
Q ss_pred hhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 164 MEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 164 l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+.+.. ...+|+++.+.+ ...++.+.+.|++||++++...
T Consensus 211 ~~~~~--~~~~d~vi~~~g----------------~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 211 LKREC--PKGIDVFFDNVG----------------GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp HHHHC--TTCEEEEEESSC----------------HHHHHHHHTTEEEEEEEEECCC
T ss_pred HHHhc--CCCceEEEECCC----------------cchHHHHHHHHhhCCEEEEEee
Confidence 22222 236999988743 1478889999999999987543
No 349
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.68 E-value=0.0041 Score=53.02 Aligned_cols=93 Identities=15% Similarity=0.150 Sum_probs=64.1
Q ss_pred cCCCCEEEEecC-C-CChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecCh-hhhhhcC
Q 041272 92 VRKGDTVVDATC-G-NGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCH-SRMEEIV 168 (267)
Q Consensus 92 l~~~~~VLDlGc-G-~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~ 168 (267)
+++|++||-.|+ | .|..+..+++.. +++|+++|.+++..+.+++ .+ .. ..+.... .++.+..
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~----~g----a~--~~~~~~~~~~~~~~~ 187 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-----GLRVLAAASRPEKLALPLA----LG----AE--EAATYAEVPERAKAW 187 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-----TCEEEEEESSGGGSHHHHH----TT----CS--EEEEGGGHHHHHHHT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHh----cC----CC--EEEECCcchhHHHHh
Confidence 789999999998 3 378888888876 3699999999988887754 22 11 1222222 3333323
Q ss_pred CCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 169 PKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
..+|+++. .+. ..++.+.+.|++||+++...
T Consensus 188 ---~~~d~vid-~g~----------------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 188 ---GGLDLVLE-VRG----------------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp ---TSEEEEEE-CSC----------------TTHHHHHTTEEEEEEEEEC-
T ss_pred ---cCceEEEE-CCH----------------HHHHHHHHhhccCCEEEEEe
Confidence 35898887 643 34678899999999987654
No 350
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.60 E-value=0.003 Score=54.90 Aligned_cols=97 Identities=20% Similarity=0.259 Sum_probs=65.3
Q ss_pred hhcCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh----h
Q 041272 90 HVVRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR----M 164 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~----l 164 (267)
..+ +|++||-+|+|. |..+..+|+..|. .+|+++|.+++.++.+++. .. .++.....+ +
T Consensus 161 ~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga----~~Vi~~~~~~~~~~~~~~l-a~----------~v~~~~~~~~~~~~ 224 (343)
T 2dq4_A 161 SGV-SGKSVLITGAGPIGLMAAMVVRASGA----GPILVSDPNPYRLAFARPY-AD----------RLVNPLEEDLLEVV 224 (343)
T ss_dssp TCC-TTSCEEEECCSHHHHHHHHHHHHTTC----CSEEEECSCHHHHGGGTTT-CS----------EEECTTTSCHHHHH
T ss_pred CCC-CCCEEEEECCCHHHHHHHHHHHHcCC----CEEEEECCCHHHHHHHHHh-HH----------hccCcCccCHHHHH
Confidence 346 899999999966 7788888887642 3899999999887777653 11 112111112 2
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.+.. ...+|+++...+. ...++.+.+.|++||+++...
T Consensus 225 ~~~~--~~g~D~vid~~g~---------------~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 225 RRVT--GSGVEVLLEFSGN---------------EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp HHHH--SSCEEEEEECSCC---------------HHHHHHHHHHEEEEEEEEECC
T ss_pred HHhc--CCCCCEEEECCCC---------------HHHHHHHHHHHhcCCEEEEEe
Confidence 2222 2358999887532 357888999999999987653
No 351
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.60 E-value=0.0035 Score=54.17 Aligned_cols=96 Identities=18% Similarity=0.122 Sum_probs=63.4
Q ss_pred hcCCCCEEEEecC--CCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEec----Chh-h
Q 041272 91 VVRKGDTVVDATC--GNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNM----CHS-R 163 (267)
Q Consensus 91 ~l~~~~~VLDlGc--G~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~----~~~-~ 163 (267)
.++++++||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++ + + .. ..+.. +.. .
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G~~V~~~~~~~~~~~~~~~-~---g----~~--~~~d~~~~~~~~~~ 206 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLK-----GCKVVGAAGSDEKIAYLKQ-I---G----FD--AAFNYKTVNSLEEA 206 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHH-T---T----CS--EEEETTSCSCHHHH
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHh-c---C----Cc--EEEecCCHHHHHHH
Confidence 5778999999998 3466777777665 4699999999988887743 2 2 11 11111 111 1
Q ss_pred hhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 164 MEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 164 l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
+.+... ..+|+++.+.+. ..++.+.+.|++||++++..
T Consensus 207 ~~~~~~--~~~d~vi~~~g~----------------~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 207 LKKASP--DGYDCYFDNVGG----------------EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp HHHHCT--TCEEEEEESSCH----------------HHHHHHHTTEEEEEEEEECC
T ss_pred HHHHhC--CCCeEEEECCCh----------------HHHHHHHHHHhcCCEEEEEe
Confidence 222222 369999988531 35788899999999997654
No 352
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.58 E-value=0.02 Score=49.69 Aligned_cols=79 Identities=15% Similarity=0.072 Sum_probs=51.6
Q ss_pred CEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCcEE
Q 041272 96 DTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTAVR 175 (267)
Q Consensus 96 ~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~d 175 (267)
.+|+|+.||.|.++..+.+. |- +...|.++|+++.+++.-+.|... ..++.+|..++.....+...+|
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G~--~~~~v~a~e~d~~a~~ty~~N~~~---------~~~~~~DI~~~~~~~~~~~~~D 71 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-GL--DGEIVAAVDINTVANSVYKHNFPE---------TNLLNRNIQQLTPQVIKKWNVD 71 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-TC--SEEEEEEECCCHHHHHHHHHHCTT---------SCEECCCGGGCCHHHHHHTTCC
T ss_pred CEEEEECcCccHHHHHHHHc-CC--CceEEEEEeCCHHHHHHHHHhCCC---------CceeccccccCCHHHhccCCCC
Confidence 38999999999999998875 11 013578999999998888776543 2234444443322110112589
Q ss_pred EEEEeCCCCCC
Q 041272 176 LVAFNLGYLPG 186 (267)
Q Consensus 176 ~ii~~~~~lp~ 186 (267)
+++..++.=++
T Consensus 72 ~l~ggpPCQ~f 82 (333)
T 4h0n_A 72 TILMSPPCQPF 82 (333)
T ss_dssp EEEECCCCCCS
T ss_pred EEEecCCCcch
Confidence 99998766444
No 353
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.53 E-value=0.023 Score=49.18 Aligned_cols=79 Identities=13% Similarity=-0.052 Sum_probs=51.5
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEE-EEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCc
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCV-YGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTA 173 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v-~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~ 173 (267)
..+|+|+.||.|.++..+.+. |- +...| .++|+++.+++.-+.|.... ++.+|..++.....+...
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G~--~~~~v~~a~e~d~~a~~ty~~N~~~~----------~~~~DI~~~~~~~i~~~~ 76 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-SI--NINATFIPFDINEIANKIYSKNFKEE----------VQVKNLDSISIKQIESLN 76 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-SC--CCCEEEEEECCCHHHHHHHHHHHCCC----------CBCCCTTTCCHHHHHHTC
T ss_pred CCEEEEECCChhHHHHHHHHc-CC--CceEEEEEEECCHHHHHHHHHHCCCC----------cccCChhhcCHHHhccCC
Confidence 458999999999999998875 20 01346 79999999998888876431 233333333211000125
Q ss_pred EEEEEEeCCCCCC
Q 041272 174 VRLVAFNLGYLPG 186 (267)
Q Consensus 174 ~d~ii~~~~~lp~ 186 (267)
+|+++..++.=++
T Consensus 77 ~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 77 CNTWFMSPPCQPY 89 (327)
T ss_dssp CCEEEECCCCTTC
T ss_pred CCEEEecCCccCc
Confidence 8999999876555
No 354
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.53 E-value=0.0048 Score=53.91 Aligned_cols=97 Identities=13% Similarity=0.174 Sum_probs=65.1
Q ss_pred hhcCCCCEEEEec-CCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChh----h
Q 041272 90 HVVRKGDTVVDAT-CGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHS----R 163 (267)
Q Consensus 90 ~~l~~~~~VLDlG-cG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~----~ 163 (267)
..++++++||-.| +|. |..+..+++.. +++|+++|.+++.++.+++. + .. ..+..... .
T Consensus 163 ~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~l----G----a~--~~~~~~~~~~~~~ 227 (353)
T 4dup_A 163 AGLTEGESVLIHGGTSGIGTTAIQLARAF-----GAEVYATAGSTGKCEACERL----G----AK--RGINYRSEDFAAV 227 (353)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHHH----T----CS--EEEETTTSCHHHH
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHhc----C----CC--EEEeCCchHHHHH
Confidence 3577899999994 443 88888888876 46899999999988888752 2 11 11211111 1
Q ss_pred hhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 164 MEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 164 l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
+.+.. ...+|+++.+.+. ..+..+.+.|++||++++..
T Consensus 228 ~~~~~--~~g~Dvvid~~g~----------------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 228 IKAET--GQGVDIILDMIGA----------------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp HHHHH--SSCEEEEEESCCG----------------GGHHHHHHTEEEEEEEEECC
T ss_pred HHHHh--CCCceEEEECCCH----------------HHHHHHHHHhccCCEEEEEE
Confidence 22222 2369999887532 35678889999999997654
No 355
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.51 E-value=0.01 Score=51.58 Aligned_cols=97 Identities=19% Similarity=0.244 Sum_probs=65.6
Q ss_pred hcCCCCEEEEecC--CCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh----h
Q 041272 91 VVRKGDTVVDATC--GNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR----M 164 (267)
Q Consensus 91 ~l~~~~~VLDlGc--G~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~----l 164 (267)
.++++++||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. + ... ++.....+ +
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~-----G~~Vi~~~~~~~~~~~~~~~----g----a~~--~~d~~~~~~~~~~ 227 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLF-----GARVIATAGSEDKLRRAKAL----G----ADE--TVNYTHPDWPKEV 227 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHHH----T----CSE--EEETTSTTHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHhc----C----CCE--EEcCCcccHHHHH
Confidence 5778999999998 4588888888875 36999999999988887642 2 111 12211112 2
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.+.. ....+|+++.+.+. ..++.+.+.|+++|+++...
T Consensus 228 ~~~~-~~~~~d~vi~~~g~----------------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 228 RRLT-GGKGADKVVDHTGA----------------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp HHHT-TTTCEEEEEESSCS----------------SSHHHHHHHEEEEEEEEESS
T ss_pred HHHh-CCCCceEEEECCCH----------------HHHHHHHHhhccCCEEEEEe
Confidence 2222 12369999988541 34678889999999987654
No 356
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.49 E-value=0.021 Score=50.04 Aligned_cols=97 Identities=16% Similarity=0.153 Sum_probs=66.3
Q ss_pred hcCCCCEEEEec-CC-CChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh----h
Q 041272 91 VVRKGDTVVDAT-CG-NGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR----M 164 (267)
Q Consensus 91 ~l~~~~~VLDlG-cG-~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~----l 164 (267)
.+++|++||-.| +| .|..+..+|+..| ++|+++|.+++.++.+++ .+ .. .++.....+ +
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G-----a~Vi~~~~~~~~~~~~~~----~G----a~--~~~~~~~~~~~~~~ 224 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAK-----CHVIGTCSSDEKSAFLKS----LG----CD--RPINYKTEPVGTVL 224 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTT-----CEEEEEESSHHHHHHHHH----TT----CS--EEEETTTSCHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCC-----CEEEEEECCHHHHHHHHH----cC----Cc--EEEecCChhHHHHH
Confidence 578899999999 34 4888889998763 689999999988888765 22 11 112111112 2
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+.. ...+|+++.+.+. ..++.+.+.|+++|++++...
T Consensus 225 ~~~~--~~g~D~vid~~g~----------------~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 225 KQEY--PEGVDVVYESVGG----------------AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp HHHC--TTCEEEEEECSCT----------------HHHHHHHHHEEEEEEEEECCC
T ss_pred HHhc--CCCCCEEEECCCH----------------HHHHHHHHHHhcCCEEEEEeC
Confidence 2222 2369999887531 477888999999999877544
No 357
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=96.48 E-value=0.016 Score=49.73 Aligned_cols=96 Identities=19% Similarity=0.093 Sum_probs=63.1
Q ss_pred HhhhcCCCCEEEEec-CCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh-h
Q 041272 88 WKHVVRKGDTVVDAT-CGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR-M 164 (267)
Q Consensus 88 ~~~~l~~~~~VLDlG-cG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~-l 164 (267)
....+++|++||=+| +|. |..+..+|+..| ++|++++ +++..+.+++ .+ .. ..+.....+ +
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G-----a~vi~~~-~~~~~~~~~~----lG----a~--~~i~~~~~~~~ 209 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKG-----TTVITTA-SKRNHAFLKA----LG----AE--QCINYHEEDFL 209 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTT-----CEEEEEE-CHHHHHHHHH----HT----CS--EEEETTTSCHH
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC-----CEEEEEe-ccchHHHHHH----cC----CC--EEEeCCCcchh
Confidence 334678999999997 776 899999999864 6899998 4444555544 33 11 123222222 3
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEE
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMV 218 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 218 (267)
.+.. ..+|+++-..+- ..+..+.+.|++||+++..
T Consensus 210 ~~~~---~g~D~v~d~~g~----------------~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 210 LAIS---TPVDAVIDLVGG----------------DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp HHCC---SCEEEEEESSCH----------------HHHHHHGGGEEEEEEEEEC
T ss_pred hhhc---cCCCEEEECCCc----------------HHHHHHHHhccCCCEEEEe
Confidence 3332 258988877431 3348889999999999764
No 358
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=96.48 E-value=0.011 Score=50.84 Aligned_cols=96 Identities=15% Similarity=0.090 Sum_probs=62.1
Q ss_pred cCCCC-EEEEecC-CC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcC
Q 041272 92 VRKGD-TVVDATC-GN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIV 168 (267)
Q Consensus 92 l~~~~-~VLDlGc-G~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 168 (267)
++++. +||=.|+ |. |..+..+|+..| ++|+++|.+++..+.+++. | ... ++.....+.....
T Consensus 143 ~~~~~g~VlV~Ga~G~vG~~aiqla~~~G-----a~Vi~~~~~~~~~~~~~~l----G----a~~--vi~~~~~~~~~~~ 207 (324)
T 3nx4_A 143 IRPQDGEVVVTGASGGVGSTAVALLHKLG-----YQVAAVSGRESTHGYLKSL----G----ANR--ILSRDEFAESRPL 207 (324)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTT-----CCEEEEESCGGGHHHHHHH----T----CSE--EEEGGGSSCCCSS
T ss_pred cCCCCCeEEEECCCcHHHHHHHHHHHHcC-----CEEEEEeCCHHHHHHHHhc----C----CCE--EEecCCHHHHHhh
Confidence 55432 4999997 44 889999999864 6999999999998888762 2 111 1111111111111
Q ss_pred CCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 169 PKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
. ...+|+++-..+ ...++.+.+.|+++|+++...
T Consensus 208 ~-~~~~d~v~d~~g----------------~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 208 E-KQLWAGAIDTVG----------------DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp C-CCCEEEEEESSC----------------HHHHHHHHHTEEEEEEEEECC
T ss_pred c-CCCccEEEECCC----------------cHHHHHHHHHHhcCCEEEEEe
Confidence 1 236888776632 147889999999999997654
No 359
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.47 E-value=0.012 Score=51.19 Aligned_cols=93 Identities=16% Similarity=0.188 Sum_probs=63.3
Q ss_pred CCCEEEEe-cCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEec--C-hhhhhhcC
Q 041272 94 KGDTVVDA-TCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNM--C-HSRMEEIV 168 (267)
Q Consensus 94 ~~~~VLDl-GcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~--~-~~~l~~~~ 168 (267)
+|++||=. |+|. |..+..+|+.. +++|+++|.+++.++.+++. + .. .++.. + ...+.+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-----Ga~Vi~~~~~~~~~~~~~~l----G----a~--~vi~~~~~~~~~~~~~- 213 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-----GLRVITTASRNETIEWTKKM----G----AD--IVLNHKESLLNQFKTQ- 213 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-----TCEEEEECCSHHHHHHHHHH----T----CS--EEECTTSCHHHHHHHH-
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHhc----C----Cc--EEEECCccHHHHHHHh-
Confidence 78999999 5665 88888888876 36999999999988888762 2 11 11111 1 1122223
Q ss_pred CCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEE
Q 041272 169 PKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMV 218 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 218 (267)
....+|+++-+.+. ...++.+.+.|++||+++..
T Consensus 214 -~~~g~Dvv~d~~g~---------------~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 214 -GIELVDYVFCTFNT---------------DMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp -TCCCEEEEEESSCH---------------HHHHHHHHHHEEEEEEEEES
T ss_pred -CCCCccEEEECCCc---------------hHHHHHHHHHhccCCEEEEE
Confidence 22369988876421 35678899999999999653
No 360
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=96.44 E-value=0.0066 Score=53.12 Aligned_cols=99 Identities=14% Similarity=0.046 Sum_probs=65.5
Q ss_pred hhcC-CCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEec-Chhhhhh
Q 041272 90 HVVR-KGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNM-CHSRMEE 166 (267)
Q Consensus 90 ~~l~-~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~-~~~~l~~ 166 (267)
..++ +|++||-+|+|. |..+..+|+..| ++|+++|.+++..+.+++.+ + ... ++.. +...+.+
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G-----a~Vi~~~~~~~~~~~~~~~l---G----a~~--vi~~~~~~~~~~ 240 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAMG-----HHVTVISSSNKKREEALQDL---G----ADD--YVIGSDQAKMSE 240 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHHT-----CEEEEEESSTTHHHHHHTTS---C----CSC--EEETTCHHHHHH
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHCC-----CeEEEEeCChHHHHHHHHHc---C----Cce--eeccccHHHHHH
Confidence 3566 899999999876 788888888764 68999999998887776432 2 111 1211 1122222
Q ss_pred cCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 167 IVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 167 ~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.. ..+|+++-..+. ...++.+.+.|++||+++....
T Consensus 241 ~~---~g~D~vid~~g~---------------~~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 241 LA---DSLDYVIDTVPV---------------HHALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ST---TTEEEEEECCCS---------------CCCSHHHHTTEEEEEEEEECSC
T ss_pred hc---CCCCEEEECCCC---------------hHHHHHHHHHhccCCEEEEeCC
Confidence 22 258999877542 1235677889999999976543
No 361
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.36 E-value=0.02 Score=49.28 Aligned_cols=74 Identities=12% Similarity=-0.065 Sum_probs=51.2
Q ss_pred CEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCcEE
Q 041272 96 DTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTAVR 175 (267)
Q Consensus 96 ~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~d 175 (267)
++|||+-||.|.++.-+-+. | -.-|.++|+++.+++.-+.|... .++.+|..++.....+ ++|
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G----~~~v~a~e~d~~a~~ty~~N~~~----------~~~~~DI~~i~~~~~~--~~D 63 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-G----FRIICANEYDKSIWKTYESNHSA----------KLIKGDISKISSDEFP--KCD 63 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-T----CEEEEEEECCTTTHHHHHHHCCS----------EEEESCGGGCCGGGSC--CCS
T ss_pred CeEEEeCcCccHHHHHHHHC-C----CEEEEEEeCCHHHHHHHHHHCCC----------CcccCChhhCCHhhCC--ccc
Confidence 47999999999999888765 2 23567999999988887776421 3455565555332222 589
Q ss_pred EEEEeCCCCCC
Q 041272 176 LVAFNLGYLPG 186 (267)
Q Consensus 176 ~ii~~~~~lp~ 186 (267)
+++..++.=++
T Consensus 64 ~l~ggpPCQ~f 74 (331)
T 3ubt_Y 64 GIIGGPPSQSW 74 (331)
T ss_dssp EEECCCCGGGT
T ss_pred EEEecCCCCCc
Confidence 99988765443
No 362
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.36 E-value=0.0048 Score=53.58 Aligned_cols=98 Identities=19% Similarity=0.184 Sum_probs=65.5
Q ss_pred hhcCCCCEEEEecC-C-CChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEec----Ch-h
Q 041272 90 HVVRKGDTVVDATC-G-NGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNM----CH-S 162 (267)
Q Consensus 90 ~~l~~~~~VLDlGc-G-~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~----~~-~ 162 (267)
..+++|++||-.|+ | .|..+..+++.. +++|+++|.+++.++.+++.+ + .. ..+.. +. .
T Consensus 151 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-----G~~V~~~~~~~~~~~~~~~~~---g----~~--~~~d~~~~~~~~~ 216 (345)
T 2j3h_A 151 CSPKEGETVYVSAASGAVGQLVGQLAKMM-----GCYVVGSAGSKEKVDLLKTKF---G----FD--DAFNYKEESDLTA 216 (345)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHHTS---C----CS--EEEETTSCSCSHH
T ss_pred hCCCCCCEEEEECCCcHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHHHc---C----Cc--eEEecCCHHHHHH
Confidence 35778999999997 3 477778888775 368999999998888776432 2 11 11111 11 1
Q ss_pred hhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 163 RMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 163 ~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.+..... ..+|+++.+.+ ...++.+.+.|++||++++..
T Consensus 217 ~~~~~~~--~~~d~vi~~~g----------------~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 217 ALKRCFP--NGIDIYFENVG----------------GKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp HHHHHCT--TCEEEEEESSC----------------HHHHHHHHTTEEEEEEEEECC
T ss_pred HHHHHhC--CCCcEEEECCC----------------HHHHHHHHHHHhcCCEEEEEc
Confidence 2222221 36999988742 147888999999999997754
No 363
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.36 E-value=0.0015 Score=70.77 Aligned_cols=108 Identities=15% Similarity=0.119 Sum_probs=54.1
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCC--CcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESS--AGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
.+..+|||||.|+|..+..+.+.++. .| ..+++-.|+|+...+.|+++++... ++.-..+..+.. ...
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~-~~~~~~~yt~td~s~~~~~~a~~~f~~~d-------i~~~~~d~~~~~--~~~ 1308 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNT-QPVMDLDYTATDRNPQALEAAQAKLEQLH-------VTQGQWDPANPA--PGS 1308 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTT-SSSCEEEEEEECSSSSSTTTTTTTHHHHT-------EEEECCCSSCCC--C--
T ss_pred CCCceEEEECCCccHHHHHHHHhhcc-cCcccceEEEecCChHHHHHHHHHhhhcc-------cccccccccccc--cCC
Confidence 45779999999999888776666542 11 2478889999999988888765421 221100110000 001
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
...||+|+.. .++|..++....++++.++|||||.+++..
T Consensus 1309 ~~~ydlvia~---------~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1309 LGKADLLVCN---------CALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp ---CCEEEEE---------CC--------------------CCEEEEEE
T ss_pred CCceeEEEEc---------ccccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 2358998876 355555666789999999999999998764
No 364
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=96.29 E-value=0.0095 Score=51.78 Aligned_cols=96 Identities=17% Similarity=0.142 Sum_probs=64.3
Q ss_pred hhcCCCCEEEEec-CCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc
Q 041272 90 HVVRKGDTVVDAT-CGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI 167 (267)
Q Consensus 90 ~~l~~~~~VLDlG-cG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~ 167 (267)
..+++|++||-+| +|. |..+..+++.. +++|+++ .+++.++.+++ .+ ... +. ...++.+.
T Consensus 146 ~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~-----Ga~Vi~~-~~~~~~~~~~~----lG----a~~---i~-~~~~~~~~ 207 (343)
T 3gaz_A 146 AQVQDGQTVLIQGGGGGVGHVAIQIALAR-----GARVFAT-ARGSDLEYVRD----LG----ATP---ID-ASREPEDY 207 (343)
T ss_dssp TCCCTTCEEEEETTTSHHHHHHHHHHHHT-----TCEEEEE-ECHHHHHHHHH----HT----SEE---EE-TTSCHHHH
T ss_pred cCCCCCCEEEEecCCCHHHHHHHHHHHHC-----CCEEEEE-eCHHHHHHHHH----cC----CCE---ec-cCCCHHHH
Confidence 3567899999999 444 88888899876 3689999 88888777755 22 111 22 22222221
Q ss_pred ---CCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 168 ---VPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 168 ---~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
......+|+++-+.+- ..+..+.+.|++||+++...
T Consensus 208 ~~~~~~~~g~D~vid~~g~----------------~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 208 AAEHTAGQGFDLVYDTLGG----------------PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp HHHHHTTSCEEEEEESSCT----------------HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHhcCCCceEEEECCCc----------------HHHHHHHHHHhcCCeEEEEc
Confidence 1122369998887431 57888899999999997643
No 365
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=96.27 E-value=0.015 Score=52.61 Aligned_cols=98 Identities=13% Similarity=0.152 Sum_probs=66.2
Q ss_pred hhcCCCCEEEEecC-CC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecCh------
Q 041272 90 HVVRKGDTVVDATC-GN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCH------ 161 (267)
Q Consensus 90 ~~l~~~~~VLDlGc-G~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~------ 161 (267)
..+++|++||=+|+ |. |..+..+|+.. +++|++++.+++.++.+++. | .. .++....
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~-----Ga~vi~~~~~~~~~~~~~~l----G----a~--~vi~~~~~d~~~~ 288 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG-----GANPICVVSSPQKAEICRAM----G----AE--AIIDRNAEGYRFW 288 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHHH----T----CC--EEEETTTTTCCSE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-----CCeEEEEECCHHHHHHHHhh----C----Cc--EEEecCcCccccc
Confidence 35778999999998 54 88888999886 46899999999888888652 2 01 1111111
Q ss_pred ---------------hhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 162 ---------------SRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 162 ---------------~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
..+.+.. ....+|+++-+.+ ...+..+.+.|++||++++..
T Consensus 289 ~~~~~~~~~~~~~~~~~i~~~t-~g~g~Dvvid~~G----------------~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 289 KDENTQDPKEWKRFGKRIRELT-GGEDIDIVFEHPG----------------RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp EETTEECHHHHHHHHHHHHHHH-TSCCEEEEEECSC----------------HHHHHHHHHHEEEEEEEEESC
T ss_pred ccccccchHHHHHHHHHHHHHh-CCCCCcEEEEcCC----------------chhHHHHHHHhhCCcEEEEEe
Confidence 1122211 1236898887742 157888899999999997653
No 366
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=96.26 E-value=0.014 Score=50.89 Aligned_cols=99 Identities=16% Similarity=0.102 Sum_probs=64.1
Q ss_pred hhcCCCCEEEEecC-C-CChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChh----h
Q 041272 90 HVVRKGDTVVDATC-G-NGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHS----R 163 (267)
Q Consensus 90 ~~l~~~~~VLDlGc-G-~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~----~ 163 (267)
..+++|++||-.|+ | .|..+..+++.. +++|+++|.+++.++.+++. + .. ..+..... .
T Consensus 158 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~~----g----~~--~~~~~~~~~~~~~ 222 (354)
T 2j8z_A 158 GNVQAGDYVLIHAGLSGVGTAAIQLTRMA-----GAIPLVTAGSQKKLQMAEKL----G----AA--AGFNYKKEDFSEA 222 (354)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHT-----TCEEEEEESCHHHHHHHHHH----T----CS--EEEETTTSCHHHH
T ss_pred cCCCCCCEEEEECCccHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHHc----C----Cc--EEEecCChHHHHH
Confidence 35778999999984 3 377777777765 46999999999988887442 2 11 11111111 1
Q ss_pred hhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 164 MEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 164 l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+.+... ...+|+++.+.+. ..+..+.+.|++||++++...
T Consensus 223 ~~~~~~-~~~~d~vi~~~G~----------------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 223 TLKFTK-GAGVNLILDCIGG----------------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp HHHHTT-TSCEEEEEESSCG----------------GGHHHHHHHEEEEEEEEECCC
T ss_pred HHHHhc-CCCceEEEECCCc----------------hHHHHHHHhccCCCEEEEEec
Confidence 222221 2369999988532 246778899999999977543
No 367
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.25 E-value=0.012 Score=51.72 Aligned_cols=99 Identities=10% Similarity=0.041 Sum_probs=64.5
Q ss_pred hhhcC-CCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEe-cChhhhh
Q 041272 89 KHVVR-KGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFN-MCHSRME 165 (267)
Q Consensus 89 ~~~l~-~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~-~~~~~l~ 165 (267)
...+. +|++||-+|+|. |..+..+|+.. +++|+++|.+++..+.+++.+ + .. .++. .+...+.
T Consensus 181 ~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~-----Ga~Vi~~~~~~~~~~~~~~~l---G----a~--~v~~~~~~~~~~ 246 (366)
T 1yqd_A 181 YFGLDEPGKHIGIVGLGGLGHVAVKFAKAF-----GSKVTVISTSPSKKEEALKNF---G----AD--SFLVSRDQEQMQ 246 (366)
T ss_dssp HTTCCCTTCEEEEECCSHHHHHHHHHHHHT-----TCEEEEEESCGGGHHHHHHTS---C----CS--EEEETTCHHHHH
T ss_pred hcCcCCCCCEEEEECCCHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHHhc---C----Cc--eEEeccCHHHHH
Confidence 33566 899999999876 77778888776 368999999998887776432 2 11 1121 1112232
Q ss_pred hcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 166 EIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 166 ~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
+.. ..+|+++.+.+.- ..++.+.+.|++||+++...
T Consensus 247 ~~~---~~~D~vid~~g~~---------------~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 247 AAA---GTLDGIIDTVSAV---------------HPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp HTT---TCEEEEEECCSSC---------------CCSHHHHHHEEEEEEEEECC
T ss_pred Hhh---CCCCEEEECCCcH---------------HHHHHHHHHHhcCCEEEEEc
Confidence 222 2599998875420 13466778899999987654
No 368
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=96.20 E-value=0.0098 Score=52.32 Aligned_cols=98 Identities=13% Similarity=0.097 Sum_probs=60.8
Q ss_pred cCCCCEEEEec-CCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 92 VRKGDTVVDAT-CGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 92 l~~~~~VLDlG-cG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
+++|++||=.| +|. |..+..+|+..| ++|++++ +++..+.+++ .+ .. .++.....++.+...
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~G-----a~Vi~~~-~~~~~~~~~~----lG----a~--~v~~~~~~~~~~~~~ 244 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWD-----AHVTAVC-SQDASELVRK----LG----AD--DVIDYKSGSVEEQLK 244 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTT-----CEEEEEE-CGGGHHHHHH----TT----CS--EEEETTSSCHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCC-----CEEEEEe-ChHHHHHHHH----cC----CC--EEEECCchHHHHHHh
Confidence 67899999999 565 888888888763 6899999 6766666643 22 11 112211112222111
Q ss_pred CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 170 KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
+...+|+++-+.+. ....+..+.+.|++||+++...
T Consensus 245 ~~~g~D~vid~~g~--------------~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 245 SLKPFDFILDNVGG--------------STETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp TSCCBSEEEESSCT--------------THHHHGGGGBCSSSCCEEEESC
T ss_pred hcCCCCEEEECCCC--------------hhhhhHHHHHhhcCCcEEEEeC
Confidence 11358888877432 0134577788999999986643
No 369
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=96.20 E-value=0.0082 Score=52.42 Aligned_cols=98 Identities=17% Similarity=0.221 Sum_probs=63.6
Q ss_pred hhcCCCCEEEEecC--CCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh----
Q 041272 90 HVVRKGDTVVDATC--GNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR---- 163 (267)
Q Consensus 90 ~~l~~~~~VLDlGc--G~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~---- 163 (267)
..++++++||-.|+ |.|..+..+++.. +++|+++|.+++.++.+++. + .. ..+.....+
T Consensus 166 ~~~~~g~~vlV~GasggiG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~~----g----a~--~~~d~~~~~~~~~ 230 (351)
T 1yb5_A 166 ACVKAGESVLVHGASGGVGLAACQIARAY-----GLKILGTAGTEEGQKIVLQN----G----AH--EVFNHREVNYIDK 230 (351)
T ss_dssp SCCCTTCEEEEETCSSHHHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHHT----T----CS--EEEETTSTTHHHH
T ss_pred hCCCCcCEEEEECCCChHHHHHHHHHHHC-----CCEEEEEeCChhHHHHHHHc----C----CC--EEEeCCCchHHHH
Confidence 35778999999997 3377777777765 46899999999888766542 2 11 112111112
Q ss_pred hhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 164 MEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 164 l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
+.+... ...+|+++.+.+ ...+..+.+.|++||++++..
T Consensus 231 ~~~~~~-~~~~D~vi~~~G----------------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 231 IKKYVG-EKGIDIIIEMLA----------------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHHHHC-TTCEEEEEESCH----------------HHHHHHHHHHEEEEEEEEECC
T ss_pred HHHHcC-CCCcEEEEECCC----------------hHHHHHHHHhccCCCEEEEEe
Confidence 222111 235899988742 135778899999999997653
No 370
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.19 E-value=0.018 Score=54.95 Aligned_cols=116 Identities=13% Similarity=0.104 Sum_probs=67.3
Q ss_pred CCEEEEecCCCChHHHHHHHhcCC---CCC-----CcEEEEEeCChHHHHHHHHHH--------------hhccc-----
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVAD---ESS-----AGCVYGLDIQSEALKSTSSLL--------------DKTTS----- 147 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~---~~p-----~~~v~giD~s~~~i~~a~~~~--------------~~~~~----- 147 (267)
.-+|+|+|.|+|...+.+.+.... .+| ..+++++|..|-..+..++-+ .....
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 359999999999988887664310 001 157999999553333333211 11100
Q ss_pred -cccc----cceEEEecChhhhhhcCC--CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEE
Q 041272 148 -KAEK----GLVKLFNMCHSRMEEIVP--KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLIS 216 (267)
Q Consensus 148 -~~~~----~~v~~~~~~~~~l~~~~~--~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 216 (267)
+..+ -.++++.+|..+....+. .+..+|.++.|. +-|....... ..+++..+.++++|||.+.
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~-f~p~~np~~w-----~~~~~~~l~~~~~~g~~~~ 208 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDG-FAPAKNPDMW-----NEQLFNAMARMTRPGGTFS 208 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECS-SCC--CCTTC-----SHHHHHHHHHHEEEEEEEE
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECC-CCCCCChhhh-----hHHHHHHHHHHhCCCCEEE
Confidence 0001 245667777766554332 135799999984 2121111111 1578999999999999874
No 371
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.16 E-value=0.011 Score=50.45 Aligned_cols=69 Identities=20% Similarity=0.200 Sum_probs=44.9
Q ss_pred ccceEEEecChhhhhhcCCCCCcEEEEEEeCCCCCCCCCcee-------e----chhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 151 KGLVKLFNMCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVI-------T----TSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 151 ~~~v~~~~~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~-------~----~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
..++.++++|..+....++ +.+||+|++|++|....+..-. . .......+++++.++|||||.+++..
T Consensus 19 ~~~~~i~~gD~~~~l~~l~-~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 19 FGVHRLHVGDAREVLASFP-EASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp --CEEEEESCHHHHHTTSC-TTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCEEEECcHHHHHhhCC-CCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 3567889988877544443 3589999999999654321100 0 01223567889999999999998875
Q ss_pred e
Q 041272 220 Y 220 (267)
Q Consensus 220 ~ 220 (267)
.
T Consensus 98 ~ 98 (297)
T 2zig_A 98 G 98 (297)
T ss_dssp C
T ss_pred C
Confidence 4
No 372
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.15 E-value=0.013 Score=50.43 Aligned_cols=98 Identities=17% Similarity=0.165 Sum_probs=64.6
Q ss_pred hcCCCCEEEEecC--CCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChh----hh
Q 041272 91 VVRKGDTVVDATC--GNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHS----RM 164 (267)
Q Consensus 91 ~l~~~~~VLDlGc--G~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~----~l 164 (267)
.++++++||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. + .. ..+..... .+
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-----G~~V~~~~~~~~~~~~~~~~----g----~~--~~~~~~~~~~~~~~ 201 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKAL-----GAKLIGTVGTAQKAQSALKA----G----AW--QVINYREEDLVERL 201 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHH-----TCEEEEEESSHHHHHHHHHH----T----CS--EEEETTTSCHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHHc----C----CC--EEEECCCccHHHHH
Confidence 5678999999993 3377777777765 36999999999888877652 2 11 11111111 22
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+... ...+|+++.+.+ ...++.+.+.|++||+++....
T Consensus 202 ~~~~~-~~~~D~vi~~~g----------------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 202 KEITG-GKKVRVVYDSVG----------------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp HHHTT-TCCEEEEEECSC----------------GGGHHHHHHTEEEEEEEEECCC
T ss_pred HHHhC-CCCceEEEECCc----------------hHHHHHHHHHhcCCCEEEEEec
Confidence 22221 236999998853 1467888999999999976543
No 373
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=96.14 E-value=0.017 Score=49.72 Aligned_cols=97 Identities=11% Similarity=0.021 Sum_probs=62.5
Q ss_pred hhcCCCC-EEEEecC-CC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChh--h-
Q 041272 90 HVVRKGD-TVVDATC-GN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHS--R- 163 (267)
Q Consensus 90 ~~l~~~~-~VLDlGc-G~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~--~- 163 (267)
..+++++ +||-.|+ |. |..+..+|+..| ++|++++.+++.++.+++ .+ ... ++..... +
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G-----a~vi~~~~~~~~~~~~~~----lG----a~~--~i~~~~~~~~~ 208 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSLAVSMLAKRG-----YTVEASTGKAAEHDYLRV----LG----AKE--VLAREDVMAER 208 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHTT-----CCEEEEESCTTCHHHHHH----TT----CSE--EEECC------
T ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHHCC-----CEEEEEECCHHHHHHHHH----cC----CcE--EEecCCcHHHH
Confidence 3467775 8999997 44 888888998864 689999999888888765 22 111 1111111 1
Q ss_pred hhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 164 MEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 164 l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
+... . ...+|+++-+.+. ..+..+.+.|++||++++..
T Consensus 209 ~~~~-~-~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 209 IRPL-D-KQRWAAAVDPVGG----------------RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp ---C-C-SCCEEEEEECSTT----------------TTHHHHHHTEEEEEEEEECS
T ss_pred HHHh-c-CCcccEEEECCcH----------------HHHHHHHHhhccCCEEEEEe
Confidence 1111 1 2358988877432 24678889999999997654
No 374
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=96.07 E-value=0.016 Score=50.02 Aligned_cols=98 Identities=20% Similarity=0.200 Sum_probs=64.8
Q ss_pred hcCCCCEEEEecC--CCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChh----hh
Q 041272 91 VVRKGDTVVDATC--GNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHS----RM 164 (267)
Q Consensus 91 ~l~~~~~VLDlGc--G~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~----~l 164 (267)
.++++++||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. + .. ..+..... .+
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-----G~~Vi~~~~~~~~~~~~~~~----g----~~--~~~d~~~~~~~~~i 206 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHL-----GATVIGTVSTEEKAETARKL----G----CH--HTINYSTQDFAEVV 206 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHHH----T----CS--EEEETTTSCHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHHc----C----CC--EEEECCCHHHHHHH
Confidence 5778999999995 4477778888775 46999999999888877652 2 11 11111111 12
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+... ...+|+++.+.+. ..++.+.+.|++||+++....
T Consensus 207 ~~~~~-~~~~d~vi~~~g~----------------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 207 REITG-GKGVDVVYDSIGK----------------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp HHHHT-TCCEEEEEECSCT----------------TTHHHHHHTEEEEEEEEECCC
T ss_pred HHHhC-CCCCeEEEECCcH----------------HHHHHHHHhhccCCEEEEEec
Confidence 22211 2259999988542 357788899999999876543
No 375
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=96.04 E-value=0.02 Score=49.29 Aligned_cols=96 Identities=14% Similarity=0.051 Sum_probs=63.3
Q ss_pred hcCCCC-EEEEecC-CC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhh-hh
Q 041272 91 VVRKGD-TVVDATC-GN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRM-EE 166 (267)
Q Consensus 91 ~l~~~~-~VLDlGc-G~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l-~~ 166 (267)
.+++++ +||-.|+ |. |..+..+|+..| ++|++++.+++.++.+++. + ... ++. ..+. .+
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G-----a~vi~~~~~~~~~~~~~~l----G----a~~--v~~--~~~~~~~ 208 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRG-----YDVVASTGNREAADYLKQL----G----ASE--VIS--REDVYDG 208 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHT-----CCEEEEESSSSTHHHHHHH----T----CSE--EEE--HHHHCSS
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCC-----CEEEEEeCCHHHHHHHHHc----C----CcE--EEE--CCCchHH
Confidence 467775 8999997 44 888888888864 5899999998888877652 2 111 121 1111 11
Q ss_pred cC--CCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 167 IV--PKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 167 ~~--~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.. .....+|+++.+.+. ..+..+.+.|++||++++..
T Consensus 209 ~~~~~~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 209 TLKALSKQQWQGAVDPVGG----------------KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp CCCSSCCCCEEEEEESCCT----------------HHHHHHHTTEEEEEEEEECC
T ss_pred HHHHhhcCCccEEEECCcH----------------HHHHHHHHhhcCCCEEEEEe
Confidence 00 012358988877432 46788899999999997654
No 376
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.96 E-value=0.017 Score=50.29 Aligned_cols=99 Identities=16% Similarity=0.080 Sum_probs=65.2
Q ss_pred hhcCCC--CEEEEecCC--CChHHHHHHHhcCCCCCCc-EEEEEeCChHHHHHHHHHHhhccccccccceEEEecChh--
Q 041272 90 HVVRKG--DTVVDATCG--NGYDTLMMLKMVADESSAG-CVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHS-- 162 (267)
Q Consensus 90 ~~l~~~--~~VLDlGcG--~G~~~~~la~~~~~~~p~~-~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~-- 162 (267)
..++++ ++||-.|++ .|..+..+++.. +. +|+++|.+++.++.+++.+ + .. ..+.....
T Consensus 154 ~~~~~g~~~~vlI~GasggiG~~~~~~a~~~-----Ga~~Vi~~~~~~~~~~~~~~~~---g----~~--~~~d~~~~~~ 219 (357)
T 2zb4_A 154 GHITAGSNKTMVVSGAAGACGSVAGQIGHFL-----GCSRVVGICGTHEKCILLTSEL---G----FD--AAINYKKDNV 219 (357)
T ss_dssp SCCCTTSCCEEEESSTTBHHHHHHHHHHHHT-----TCSEEEEEESCHHHHHHHHHTS---C----CS--EEEETTTSCH
T ss_pred cCCCCCCccEEEEECCCcHHHHHHHHHHHHC-----CCCeEEEEeCCHHHHHHHHHHc---C----Cc--eEEecCchHH
Confidence 357789 999999983 367777777765 35 9999999988877776532 2 11 11111111
Q ss_pred --hhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 163 --RMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 163 --~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+.+... . .+|+++.+.+ ...++.+.+.|++||++++...
T Consensus 220 ~~~~~~~~~-~-~~d~vi~~~G----------------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 220 AEQLRESCP-A-GVDVYFDNVG----------------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp HHHHHHHCT-T-CEEEEEESCC----------------HHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHHHhcC-C-CCCEEEECCC----------------HHHHHHHHHHhccCcEEEEECC
Confidence 1222222 2 6899998843 1578889999999999976543
No 377
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.91 E-value=0.26 Score=42.62 Aligned_cols=115 Identities=17% Similarity=0.258 Sum_probs=73.3
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccc-----------------ccccceE
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSK-----------------AEKGLVK 155 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~-----------------~~~~~v~ 155 (267)
.+...|+.+|||.......+....+ +.+++-||. |+.++.-++.+.+.+.- ....+..
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~----~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 170 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFP----HLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYK 170 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCT----TEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEE
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCC----CCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceE
Confidence 3557899999999999999887532 478999998 88888888877764200 0125677
Q ss_pred EEecChhhhh------hcCCCCCcEEEEEEeCCCCCCCCCceee--chhhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 156 LFNMCHSRME------EIVPKSTAVRLVAFNLGYLPGGDKSVIT--TSETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 156 ~~~~~~~~l~------~~~~~~~~~d~ii~~~~~lp~~d~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
++..|..+.. ..........++++- .++. .++...++++.+.+.. |+|.+++.+...
T Consensus 171 ~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaE---------gvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~ 235 (334)
T 1rjd_A 171 LAACDLNDITETTRLLDVCTKREIPTIVISE---------CLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIG 235 (334)
T ss_dssp EEECCTTCHHHHHHHHHTTCCTTSCEEEEEE---------SCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECC
T ss_pred EEecCCCCcHHHHHHHHhcCCCCCCEEEEEc---------chhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccC
Confidence 8877666421 111121233444443 1221 3456678888888876 788876665543
No 378
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=95.84 E-value=0.044 Score=47.84 Aligned_cols=98 Identities=18% Similarity=0.227 Sum_probs=63.6
Q ss_pred hhcCCCCEEEEecCCC-ChHHHHHHHhc-CCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecCh---hhh
Q 041272 90 HVVRKGDTVVDATCGN-GYDTLMMLKMV-ADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCH---SRM 164 (267)
Q Consensus 90 ~~l~~~~~VLDlGcG~-G~~~~~la~~~-~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~---~~l 164 (267)
..+++|++||=+|+|. |..+..+|+.. | ++|+++|.+++.++.+++ .| .. .++.... ..+
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~G-----a~Vi~~~~~~~~~~~~~~----lG----a~--~vi~~~~~~~~~v 246 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTP-----ATVIALDVKEEKLKLAER----LG----AD--HVVDARRDPVKQV 246 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCC-----CEEEEEESSHHHHHHHHH----TT----CS--EEEETTSCHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-----CeEEEEeCCHHHHHHHHH----hC----CC--EEEeccchHHHHH
Confidence 4678999999999976 77778888876 4 589999999998888864 22 11 1121111 122
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHH--HHHHHHhcccCCcEEEEEEe
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKM--ALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~--~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+.. ....+|+++-..+. .. .++.+.+. +||+++....
T Consensus 247 ~~~~-~g~g~Dvvid~~G~---------------~~~~~~~~~~~~--~~G~~v~~g~ 286 (359)
T 1h2b_A 247 MELT-RGRGVNVAMDFVGS---------------QATVDYTPYLLG--RMGRLIIVGY 286 (359)
T ss_dssp HHHT-TTCCEEEEEESSCC---------------HHHHHHGGGGEE--EEEEEEECCC
T ss_pred HHHh-CCCCCcEEEECCCC---------------chHHHHHHHhhc--CCCEEEEEeC
Confidence 2222 12269999887432 23 66677776 8998876543
No 379
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.71 E-value=0.06 Score=51.12 Aligned_cols=115 Identities=12% Similarity=0.153 Sum_probs=66.4
Q ss_pred CEEEEecCCCChHHHHHHHhcC------CCC--CCcEEEEEeC---ChHHHHHHHHH-----------Hhhccc------
Q 041272 96 DTVVDATCGNGYDTLMMLKMVA------DES--SAGCVYGLDI---QSEALKSTSSL-----------LDKTTS------ 147 (267)
Q Consensus 96 ~~VLDlGcG~G~~~~~la~~~~------~~~--p~~~v~giD~---s~~~i~~a~~~-----------~~~~~~------ 147 (267)
-+|||+|-|+|...+...+... +.. ...+++++|. +++.+..+-.. ......
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 4899999999998877665431 000 1246899999 66666644332 111110
Q ss_pred ccc----ccceEEEecChhhhhhcCC--CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEE
Q 041272 148 KAE----KGLVKLFNMCHSRMEEIVP--KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLIS 216 (267)
Q Consensus 148 ~~~----~~~v~~~~~~~~~l~~~~~--~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 216 (267)
+.. ...+++..+|..+....+. ....+|+++.|. +-|....... ..++++.+.++++|||.+.
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~-f~p~~np~~w-----~~~~~~~l~~~~~~g~~~~ 216 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDG-FAPAKNPDMW-----TQNLFNAMARLARPGGTLA 216 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECC-SCGGGCGGGS-----CHHHHHHHHHHEEEEEEEE
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECC-CCCcCChhhh-----hHHHHHHHHHHhCCCCEEE
Confidence 000 1234456666665443332 134799999983 1111111100 2578999999999999984
No 380
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.66 E-value=0.017 Score=50.65 Aligned_cols=94 Identities=9% Similarity=0.088 Sum_probs=60.4
Q ss_pred CCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCCh---HHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 95 GDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQS---EALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 95 ~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~---~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
|++||-+|+|. |..+..+++..| ++|+++|.++ +..+.+++ .+ ...+. .......+.+ . .
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~G-----a~Vi~~~~~~~~~~~~~~~~~----~g----a~~v~-~~~~~~~~~~-~-~ 244 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYG-----LEVWMANRREPTEVEQTVIEE----TK----TNYYN-SSNGYDKLKD-S-V 244 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHT-----CEEEEEESSCCCHHHHHHHHH----HT----CEEEE-CTTCSHHHHH-H-H
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-----CEEEEEeCCccchHHHHHHHH----hC----Cceec-hHHHHHHHHH-h-C
Confidence 99999999855 677777777663 6999999998 77776654 22 11111 0000111222 1 1
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHH-HHHHhcccCCcEEEEEEe
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMAL-EAAERILIPGGLISMVVY 220 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l-~~~~~~LkpgG~l~i~~~ 220 (267)
..+|+++.+.+. ...+ +.+.+.|++||++++...
T Consensus 245 -~~~d~vid~~g~---------------~~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 245 -GKFDVIIDATGA---------------DVNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp -CCEEEEEECCCC---------------CTHHHHHHGGGEEEEEEEEECSC
T ss_pred -CCCCEEEECCCC---------------hHHHHHHHHHHHhcCCEEEEEec
Confidence 359999888542 1356 888999999999876543
No 381
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.63 E-value=0.11 Score=47.46 Aligned_cols=82 Identities=11% Similarity=0.033 Sum_probs=53.0
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcC------
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIV------ 168 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~------ 168 (267)
..+++|+.||.|.++..+.+. | ...|.++|+++.+++.-+.|.... ....++.+|..++....
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G----~~~v~avE~d~~A~~ty~~N~~~~------p~~~~~~~DI~~i~~~~~~~~~~ 156 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-G----GQCVFTSEWNKHAVRTYKANHYCD------PATHHFNEDIRDITLSHQEGVSD 156 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-T----EEEEEEECCCHHHHHHHHHHSCCC------TTTCEEESCTHHHHCTTCTTSCH
T ss_pred cceEEEecCCccHHHHHHHHC-C----CEEEEEEeCCHHHHHHHHHhcccC------CCcceeccchhhhhhccccccch
Confidence 358999999999999998865 2 235889999999888777765221 22334555555443100
Q ss_pred --------CCCCcEEEEEEeCCCCCCC
Q 041272 169 --------PKSTAVRLVAFNLGYLPGG 187 (267)
Q Consensus 169 --------~~~~~~d~ii~~~~~lp~~ 187 (267)
.....+|+++..++.=+++
T Consensus 157 ~~~~~~i~~~~~~~Dvl~gGpPCQ~FS 183 (482)
T 3me5_A 157 EAAAEHIRQHIPEHDVLLAGFPCQPFS 183 (482)
T ss_dssp HHHHHHHHHHSCCCSEEEEECCCCCC-
T ss_pred hhHHhhhhhcCCCCCEEEecCCCcchh
Confidence 0012589999998764443
No 382
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=95.57 E-value=0.034 Score=50.09 Aligned_cols=97 Identities=14% Similarity=0.128 Sum_probs=64.5
Q ss_pred hhcCCCCEEEEecC-CC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEec---C----
Q 041272 90 HVVRKGDTVVDATC-GN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNM---C---- 160 (267)
Q Consensus 90 ~~l~~~~~VLDlGc-G~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~---~---- 160 (267)
..+++|++||=.|+ |. |..+..+|+.. +++|++++.+++.++.+++ .+ ... ++.. +
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~-----Ga~vi~~~~~~~~~~~~~~----lG----a~~--~i~~~~~~~~~~ 280 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG-----GGIPVAVVSSAQKEAAVRA----LG----CDL--VINRAELGITDD 280 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-----TCEEEEEESSHHHHHHHHH----TT----CCC--EEEHHHHTCCTT
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHh----cC----CCE--EEeccccccccc
Confidence 35778999999997 44 78888888876 4689999999998888754 22 111 1110 0
Q ss_pred ---------------hhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 161 ---------------HSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 161 ---------------~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.+.+.+.. ...+|+++-+.+. ..++.+.+.|++||++++..
T Consensus 281 ~~~~~~~~~~~~~~~~~~v~~~~--g~g~Dvvid~~G~----------------~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 281 IADDPRRVVETGRKLAKLVVEKA--GREPDIVFEHTGR----------------VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHH--SSCCSEEEECSCH----------------HHHHHHHHHSCTTCEEEESC
T ss_pred ccccccccchhhhHHHHHHHHHh--CCCceEEEECCCc----------------hHHHHHHHHHhcCCEEEEEe
Confidence 11122222 2357888877431 46788889999999997753
No 383
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=95.53 E-value=0.053 Score=47.56 Aligned_cols=94 Identities=11% Similarity=0.018 Sum_probs=62.2
Q ss_pred CCCCEEEEecCC--CChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhh----hh
Q 041272 93 RKGDTVVDATCG--NGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRM----EE 166 (267)
Q Consensus 93 ~~~~~VLDlGcG--~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l----~~ 166 (267)
++|++||=+|++ .|..+..+|+..| ++|+++. +++..+.+++ .| --.++.....++ .+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G-----a~Vi~~~-~~~~~~~~~~----lG------a~~vi~~~~~~~~~~v~~ 226 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG-----YIPIATC-SPHNFDLAKS----RG------AEEVFDYRAPNLAQTIRT 226 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT-----CEEEEEE-CGGGHHHHHH----TT------CSEEEETTSTTHHHHHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC-----CEEEEEe-CHHHHHHHHH----cC------CcEEEECCCchHHHHHHH
Confidence 788999999983 4889999998864 6899885 8887777765 22 112222222222 22
Q ss_pred cCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcc-cCCcEEEEEE
Q 041272 167 IVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERIL-IPGGLISMVV 219 (267)
Q Consensus 167 ~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~L-kpgG~l~i~~ 219 (267)
... ..+|+++-..+. ...++.+.+.| ++||+++...
T Consensus 227 ~t~--g~~d~v~d~~g~---------------~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 227 YTK--NNLRYALDCITN---------------VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp HTT--TCCCEEEESSCS---------------HHHHHHHHHHSCTTCEEEEESS
T ss_pred Hcc--CCccEEEECCCc---------------hHHHHHHHHHhhcCCCEEEEEe
Confidence 222 248888877432 35788888899 6999997643
No 384
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.21 E-value=0.17 Score=43.00 Aligned_cols=81 Identities=9% Similarity=-0.079 Sum_probs=53.2
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcE-EEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc-CCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGC-VYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI-VPK 170 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~-v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~-~~~ 170 (267)
+.+.+|+|+.||.|.++..+.+. |- ... |.++|+++.+++.-+.|.. ...++.+|..++... +++
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~---~~~~v~a~E~d~~a~~ty~~N~~---------~~~~~~~DI~~i~~~~i~~ 80 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GI---QVDRYIASEVCEDSITVGMVRHQ---------GKIMYVGDVRSVTQKHIQE 80 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TB---CEEEEEEECCCHHHHHHHHHHTT---------TCEEEECCGGGCCHHHHHH
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CC---ccceEEEEECCHHHHHHHHHhCC---------CCceeCCChHHccHHHhcc
Confidence 35569999999999999988875 21 122 6899999998887776543 223444555444221 111
Q ss_pred CCcEEEEEEeCCCCCC
Q 041272 171 STAVRLVAFNLGYLPG 186 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~ 186 (267)
..++|+++..++.=++
T Consensus 81 ~~~~Dll~ggpPCQ~f 96 (295)
T 2qrv_A 81 WGPFDLVIGGSPCNDL 96 (295)
T ss_dssp TCCCSEEEECCCCGGG
T ss_pred cCCcCEEEecCCCccc
Confidence 1358999999877444
No 385
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=95.05 E-value=0.072 Score=46.39 Aligned_cols=102 Identities=14% Similarity=0.086 Sum_probs=59.1
Q ss_pred hcCCC-CEEEEecC-CC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecCh---hh-
Q 041272 91 VVRKG-DTVVDATC-GN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCH---SR- 163 (267)
Q Consensus 91 ~l~~~-~~VLDlGc-G~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~---~~- 163 (267)
.+++| ++||=.|+ |. |..+..+|+..| ++|+++..+++.++..++.+++.| ... ++.... .+
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G-----a~vi~~~~~~~~~~~~~~~~~~lG----a~~--vi~~~~~~~~~~ 231 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLLN-----FNSISVIRDRPNLDEVVASLKELG----ATQ--VITEDQNNSREF 231 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHHT-----CEEEEEECCCTTHHHHHHHHHHHT----CSE--EEEHHHHHCGGG
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHCC-----CEEEEEecCccccHHHHHHHHhcC----CeE--EEecCccchHHH
Confidence 57789 99999997 54 888899998874 688888765543221122223333 111 121111 12
Q ss_pred ---hhhcCC-CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 164 ---MEEIVP-KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 164 ---l~~~~~-~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
+.+... ....+|+++-..+. .... .+.+.|++||+++...
T Consensus 232 ~~~i~~~t~~~~~g~Dvvid~~G~---------------~~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 232 GPTIKEWIKQSGGEAKLALNCVGG---------------KSST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp HHHHHHHHHHHTCCEEEEEESSCH---------------HHHH-HHHHTSCTTCEEEECC
T ss_pred HHHHHHHhhccCCCceEEEECCCc---------------hhHH-HHHHHhccCCEEEEec
Confidence 111110 12258999877431 2233 6789999999997654
No 386
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=94.82 E-value=0.054 Score=47.16 Aligned_cols=97 Identities=12% Similarity=0.143 Sum_probs=55.4
Q ss_pred hcCCCCEEEEecC-CC-ChHHHHHHHhcCCCCCCcEEEE-EeCChH---HHHHHHHHHhhccccccccceEEEecC---h
Q 041272 91 VVRKGDTVVDATC-GN-GYDTLMMLKMVADESSAGCVYG-LDIQSE---ALKSTSSLLDKTTSKAEKGLVKLFNMC---H 161 (267)
Q Consensus 91 ~l~~~~~VLDlGc-G~-G~~~~~la~~~~~~~p~~~v~g-iD~s~~---~i~~a~~~~~~~~~~~~~~~v~~~~~~---~ 161 (267)
.+++|++||=.|+ |. |..+..+|+..| +++++ ++.++. ..+.++ +.| .. .++... .
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~G-----a~vi~~~~~~~~~~~~~~~~~----~lG----a~--~vi~~~~~~~ 228 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAALG-----LRTINVVRDRPDIQKLSDRLK----SLG----AE--HVITEEELRR 228 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT-----CEEEEEECCCSCHHHHHHHHH----HTT----CS--EEEEHHHHHS
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHcC-----CEEEEEecCccchHHHHHHHH----hcC----Cc--EEEecCcchH
Confidence 5789999999997 44 888999999874 45555 444432 234443 333 11 112211 0
Q ss_pred hhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEE
Q 041272 162 SRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMV 218 (267)
Q Consensus 162 ~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 218 (267)
.++.+.......+|+++-..+. ....++.+.|++||+++..
T Consensus 229 ~~~~~~~~~~~~~Dvvid~~g~----------------~~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 229 PEMKNFFKDMPQPRLALNCVGG----------------KSSTELLRQLARGGTMVTY 269 (357)
T ss_dssp GGGGGTTSSSCCCSEEEESSCH----------------HHHHHHHTTSCTTCEEEEC
T ss_pred HHHHHHHhCCCCceEEEECCCc----------------HHHHHHHHhhCCCCEEEEE
Confidence 1222222111137777766321 2234678999999999765
No 387
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=94.79 E-value=0.4 Score=47.52 Aligned_cols=78 Identities=9% Similarity=-0.027 Sum_probs=53.8
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCc--EEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhh-------
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAG--CVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRME------- 165 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~--~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~------- 165 (267)
..+++|+.||.|.++.-+.+. +. .|.++|+++.+++.-+.|. ....++.+|..++.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A------G~~~vv~avEid~~A~~ty~~N~---------p~~~~~~~DI~~l~~~~~~~d 604 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA------GISDTLWAIEMWDPAAQAFRLNN---------PGSTVFTEDCNILLKLVMAGE 604 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH------TSEEEEEEECSSHHHHHHHHHHC---------TTSEEECSCHHHHHHHHHHTC
T ss_pred CCeEEEeccCccHHHHHHHHC------CCCceEEEEECCHHHHHHHHHhC---------CCCccccccHHHHhhhccchh
Confidence 348999999999999998876 33 5779999999888777654 23445555544331
Q ss_pred --h----cCCCCCcEEEEEEeCCCCCCC
Q 041272 166 --E----IVPKSTAVRLVAFNLGYLPGG 187 (267)
Q Consensus 166 --~----~~~~~~~~d~ii~~~~~lp~~ 187 (267)
. .++....+|+++..++.=+++
T Consensus 605 i~~~~~~~lp~~~~vDll~GGpPCQ~FS 632 (1002)
T 3swr_A 605 TTNSRGQRLPQKGDVEMLCGGPPCQGFS 632 (1002)
T ss_dssp SBCTTCCBCCCTTTCSEEEECCCCTTCC
T ss_pred hhhhhhhhcccCCCeeEEEEcCCCcchh
Confidence 1 122334789999998765554
No 388
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.68 E-value=0.062 Score=46.34 Aligned_cols=68 Identities=12% Similarity=0.015 Sum_probs=46.7
Q ss_pred cceEEEecChhhhhhcCCCCCcEEEEEEeCCCCCCCCCcee-----echhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 152 GLVKLFNMCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVI-----TTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 152 ~~v~~~~~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~-----~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.+..++++|..+....++ +.++|+|+.++||-...+.... .........++++.++|||||.+++..-
T Consensus 13 ~~~~ii~gD~~~~l~~l~-~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFP-EESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SSEEEEESCHHHHGGGSC-SSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCceEEeCcHHHHHhhCC-CCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 467788888776554443 4589999999999543221111 1123456788999999999999988754
No 389
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=94.59 E-value=0.05 Score=47.20 Aligned_cols=96 Identities=9% Similarity=-0.054 Sum_probs=58.7
Q ss_pred CCC-CEEEEe-cCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC
Q 041272 93 RKG-DTVVDA-TCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP 169 (267)
Q Consensus 93 ~~~-~~VLDl-GcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 169 (267)
+++ .+||=. |+|. |..+..+|+..| ++|+++|.+++.++.+++. + .. ..+.....++.+...
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~G-----a~Vi~~~~~~~~~~~~~~~----G----a~--~~~~~~~~~~~~~v~ 226 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEEG-----FRPIVTVRRDEQIALLKDI----G----AA--HVLNEKAPDFEATLR 226 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHHT-----CEEEEEESCGGGHHHHHHH----T----CS--EEEETTSTTHHHHHH
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHCC-----CEEEEEeCCHHHHHHHHHc----C----CC--EEEECCcHHHHHHHH
Confidence 445 566654 5554 777778888764 6999999999988888652 2 11 122221122222110
Q ss_pred ---CCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 170 ---KSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 170 ---~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
....+|+++-+.+. ..+..+.+.|++||++++..
T Consensus 227 ~~~~~~g~D~vid~~g~----------------~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 227 EVMKAEQPRIFLDAVTG----------------PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp HHHHHHCCCEEEESSCH----------------HHHHHHHHHSCTTCEEEECC
T ss_pred HHhcCCCCcEEEECCCC----------------hhHHHHHhhhcCCCEEEEEe
Confidence 01247888876431 34577889999999998764
No 390
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=94.33 E-value=1.1 Score=43.27 Aligned_cols=48 Identities=19% Similarity=0.032 Sum_probs=34.9
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCC-cEEEEEeCChHHHHHHHHHH
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSA-GCVYGLDIQSEALKSTSSLL 142 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~-~~v~giD~s~~~i~~a~~~~ 142 (267)
..+|+|+-||.|.++.-+.+..+..... .-+.++|+++.+++.-+.|.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 4589999999999998887652100000 24789999999998887774
No 391
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=94.29 E-value=0.1 Score=45.24 Aligned_cols=99 Identities=16% Similarity=0.092 Sum_probs=56.8
Q ss_pred hhcCCCCEEEEecC-CC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecCh-hhhhh
Q 041272 90 HVVRKGDTVVDATC-GN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCH-SRMEE 166 (267)
Q Consensus 90 ~~l~~~~~VLDlGc-G~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~-~~l~~ 166 (267)
..+++|++||=.|+ |. |..+..+|+..+ +.+|++++ +++..+.++ .+ ...+--...+. ..+.+
T Consensus 138 ~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g----~~~V~~~~-~~~~~~~~~-----~g----a~~~~~~~~~~~~~~~~ 203 (349)
T 4a27_A 138 ANLREGMSVLVHSAGGGVGQAVAQLCSTVP----NVTVFGTA-STFKHEAIK-----DS----VTHLFDRNADYVQEVKR 203 (349)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHTTST----TCEEEEEE-CGGGHHHHG-----GG----SSEEEETTSCHHHHHHH
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHcC----CcEEEEeC-CHHHHHHHH-----cC----CcEEEcCCccHHHHHHH
Confidence 35778999999998 43 777788887754 37899998 555555443 22 11111011111 12222
Q ss_pred cCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 167 IVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 167 ~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.. ...+|+++-..+- ..+..+.+.|++||++++...
T Consensus 204 ~~--~~g~Dvv~d~~g~----------------~~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 204 IS--AEGVDIVLDCLCG----------------DNTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp HC--TTCEEEEEEECC-----------------------CTTEEEEEEEEEEC-
T ss_pred hc--CCCceEEEECCCc----------------hhHHHHHHHhhcCCEEEEECC
Confidence 22 2369999877432 234778899999999987643
No 392
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.19 E-value=0.18 Score=42.05 Aligned_cols=118 Identities=15% Similarity=0.067 Sum_probs=69.5
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCC------------hHHHHHHHHHHhhccccccccceEEEecCh
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQ------------SEALKSTSSLLDKTTSKAEKGLVKLFNMCH 161 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s------------~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~ 161 (267)
.+++||=-|++. .++..+++.+-. -+.+|+.+|.+ .+.++.+.+.+...+ .++.++..|.
T Consensus 9 ~gk~vlVTGas~-gIG~~ia~~l~~--~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~D~ 80 (287)
T 3pxx_A 9 QDKVVLVTGGAR-GQGRSHAVKLAE--EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-----RKAYTAEVDV 80 (287)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHH--TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-----SCEEEEECCT
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHH--CCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC-----CceEEEEccC
Confidence 366788777665 455555544322 15799999987 666666666665543 5677777666
Q ss_pred hhhhhc---C----CCCCcEEEEEEeCCCCCCCCCcee--------echhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 162 SRMEEI---V----PKSTAVRLVAFNLGYLPGGDKSVI--------TTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 162 ~~l~~~---~----~~~~~~d~ii~~~~~lp~~d~~~~--------~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.+.... . .....+|+++.|.+..+.....-. ........+.+.+.+.++.+|.++.+.
T Consensus 81 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 81 RDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 554321 1 111268999999887544311000 011223445677778888888876543
No 393
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.96 E-value=0.12 Score=45.43 Aligned_cols=100 Identities=18% Similarity=0.216 Sum_probs=58.5
Q ss_pred CCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 94 KGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 94 ~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
++.+|+=+|+|. |..+..+++.+ +.+|+++|.+++.++.+++.... .+........++.+...
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-----Ga~V~~~d~~~~~l~~~~~~~g~--------~~~~~~~~~~~l~~~l~--- 230 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-----GATVTVLDINIDKLRQLDAEFCG--------RIHTRYSSAYELEGAVK--- 230 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-----TCEEEEEESCHHHHHHHHHHTTT--------SSEEEECCHHHHHHHHH---
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CCEEEEEeCCHHHHHHHHHhcCC--------eeEeccCCHHHHHHHHc---
Confidence 478999999965 55555555554 35899999999888777653321 11111112233333321
Q ss_pred cEEEEEEeCCCCCCC-CCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 173 AVRLVAFNLGYLPGG-DKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~-d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
..|+++...+. |.. ... -+.+++.+.+||||+++-+.
T Consensus 231 ~aDvVi~~~~~-p~~~t~~---------li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 231 RADLVIGAVLV-PGAKAPK---------LVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp HCSEEEECCCC-TTSCCCC---------CBCHHHHTTSCTTCEEEEGG
T ss_pred CCCEEEECCCc-CCCCCcc---------eecHHHHhcCCCCcEEEEEe
Confidence 46888876432 211 101 12356677889999886443
No 394
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.75 E-value=0.5 Score=34.99 Aligned_cols=99 Identities=8% Similarity=-0.056 Sum_probs=54.7
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC-CCCc
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP-KSTA 173 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-~~~~ 173 (267)
.++|+=+||| .++..+++.+.. -+.+|+++|.+++.++.+++ . .+.++.++..+...+.. .-..
T Consensus 7 ~~~viIiG~G--~~G~~la~~L~~--~g~~v~vid~~~~~~~~~~~----~-------g~~~i~gd~~~~~~l~~a~i~~ 71 (140)
T 3fwz_A 7 CNHALLVGYG--RVGSLLGEKLLA--SDIPLVVIETSRTRVDELRE----R-------GVRAVLGNAANEEIMQLAHLEC 71 (140)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHH--TTCCEEEEESCHHHHHHHHH----T-------TCEEEESCTTSHHHHHHTTGGG
T ss_pred CCCEEEECcC--HHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHH----c-------CCCEEECCCCCHHHHHhcCccc
Confidence 4578888875 555555554422 14689999999998887764 1 24455555543322110 0124
Q ss_pred EEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 174 VRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 174 ~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.|.++...+. +.....+-...+.+.|+..++....
T Consensus 72 ad~vi~~~~~------------~~~n~~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 72 AKWLILTIPN------------GYEAGEIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp CSEEEECCSC------------HHHHHHHHHHHHHHCSSSEEEEEES
T ss_pred CCEEEEECCC------------hHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 6777766321 1111223334566688887655443
No 395
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=93.72 E-value=0.27 Score=41.44 Aligned_cols=119 Identities=13% Similarity=0.109 Sum_probs=67.1
Q ss_pred CCCEEEEecCCCC-hHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C-
Q 041272 94 KGDTVVDATCGNG-YDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G-~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~- 168 (267)
.+++||=.|.++| .++..+++.+-. -+.+|+.++.++...+.+++..... .++.++..|..+.... .
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAARE--AGAELAFTYQGDALKKRVEPLAEEL------GAFVAGHCDVADAASIDAVFE 101 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHH--TTCEEEEEECSHHHHHHHHHHHHHH------TCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHHHHhc------CCceEEECCCCCHHHHHHHHH
Confidence 4678998887743 344444433211 1578999999976655555544442 3566666666544321 1
Q ss_pred ---CCCCcEEEEEEeCCCCCC---CCCceeech-----------hhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 169 ---PKSTAVRLVAFNLGYLPG---GDKSVITTS-----------ETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 169 ---~~~~~~d~ii~~~~~lp~---~d~~~~~~~-----------~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.....+|+++.|.+.... ......... .....+.+.+.+.++.+|.++.+.-
T Consensus 102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 112368999999887531 000001111 1223456677777888888876543
No 396
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=93.64 E-value=0.25 Score=40.93 Aligned_cols=65 Identities=15% Similarity=0.085 Sum_probs=41.6
Q ss_pred eEEEecChhhhhhcCCCCCcEEEEEEeCCCCCC-CCCcee-e---chhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 154 VKLFNMCHSRMEEIVPKSTAVRLVAFNLGYLPG-GDKSVI-T---TSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 154 v~~~~~~~~~l~~~~~~~~~~d~ii~~~~~lp~-~d~~~~-~---~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
..++++|..+....++ +.++|+|+.++||--. .+..-. . ........++++.++|+|||.+++..
T Consensus 5 ~~l~~gD~~~~l~~l~-~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVE-NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSEEECCHHHHHHHSC-TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEechHHHHHHhcc-ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 3466777665544443 3489999999998433 111100 0 11234677888899999999998764
No 397
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=93.55 E-value=0.21 Score=41.04 Aligned_cols=119 Identities=11% Similarity=-0.003 Sum_probs=69.4
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---CC-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---VP- 169 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~~- 169 (267)
.+.+||=.| |+|.++..+++.+-.. .+.+|+.++.+++..+...+.+...+ .++.++..|..+.... ..
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~-~g~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dl~~~~~~~~~~~~ 75 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRL-FSGDVVLTARDVTRGQAAVQQLQAEG-----LSPRFHQLDIDDLQSIRALRDF 75 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHH-SSSEEEEEESSHHHHHHHHHHHHHTT-----CCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHh-cCCeEEEEeCChHHHHHHHHHHHhcC-----CeeEEEECCCCCHHHHHHHHHH
Confidence 356777666 5677777776654210 05799999999887777666665533 4567776666544321 11
Q ss_pred ---CCCcEEEEEEeCCCCCCCCCcee--e--------chhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 170 ---KSTAVRLVAFNLGYLPGGDKSVI--T--------TSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 170 ---~~~~~d~ii~~~~~lp~~d~~~~--~--------~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
....+|+++.+.+.......... . .......+++.+.+.++++|.++.+.
T Consensus 76 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 76 LRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp HHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 11268999999876443211000 0 11122345666777777778776653
No 398
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.52 E-value=0.42 Score=41.10 Aligned_cols=100 Identities=14% Similarity=0.107 Sum_probs=65.1
Q ss_pred CCEEEEecCCC-C-hHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccc--------------ccccceEEEe
Q 041272 95 GDTVVDATCGN-G-YDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSK--------------AEKGLVKLFN 158 (267)
Q Consensus 95 ~~~VLDlGcG~-G-~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~--------------~~~~~v~~~~ 158 (267)
..+|-=||+|+ | .++..+|.. +.+|+.+|++++.++.+.+++++.-.. ....+++..
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~------G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~- 78 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC- 78 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-
T ss_pred CCeEEEECCcHHHHHHHHHHHhC------CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc-
Confidence 45899999987 3 445555554 578999999999999888776542100 001223332
Q ss_pred cChhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEE
Q 041272 159 MCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISM 217 (267)
Q Consensus 159 ~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 217 (267)
.++.+.. ...|+|+-. +....+-+.++++++-++++|+-+|.-
T Consensus 79 ---~~l~~a~---~~ad~ViEa----------v~E~l~iK~~lf~~l~~~~~~~aIlaS 121 (319)
T 3ado_A 79 ---TNLAEAV---EGVVHIQEC----------VPENLDLKRKIFAQLDSIVDDRVVLSS 121 (319)
T ss_dssp ---CCHHHHT---TTEEEEEEC----------CCSCHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred ---cchHhHh---ccCcEEeec----------cccHHHHHHHHHHHHHHHhhhcceeeh
Confidence 1222222 258888887 344567778999999999999988843
No 399
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.35 E-value=1.2 Score=34.25 Aligned_cols=42 Identities=17% Similarity=0.109 Sum_probs=28.2
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCC-CcEEEEEeCChHHHHHHHH
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESS-AGCVYGLDIQSEALKSTSS 140 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p-~~~v~giD~s~~~i~~a~~ 140 (267)
+++|+=+|+| .++..+++.+.. . +.+|+++|.+++.++.+++
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~--~~g~~V~vid~~~~~~~~~~~ 81 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRA--RYGKISLGIEIREEAAQQHRS 81 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHH--HHCSCEEEEESCHHHHHHHHH
T ss_pred CCcEEEECCC--HHHHHHHHHHHh--ccCCeEEEEECCHHHHHHHHH
Confidence 5689888865 555555554321 1 2579999999988776653
No 400
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=93.16 E-value=0.86 Score=38.18 Aligned_cols=118 Identities=14% Similarity=-0.009 Sum_probs=67.1
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChH-HHHHHHHHHhhccccccccceEEEecChhhhhhc---C-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSE-ALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~-~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~- 168 (267)
.+++||=.|.+. .++..+++.+-. .+.+|+.+|.+++ ..+...+.++..+ .++.++..|..+.... .
T Consensus 46 ~gk~vlVTGas~-GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~ 117 (291)
T 3ijr_A 46 KGKNVLITGGDS-GIGRAVSIAFAK--EGANIAIAYLDEEGDANETKQYVEKEG-----VKCVLLPGDLSDEQHCKDIVQ 117 (291)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHH--TTCEEEEEESSCHHHHHHHHHHHHTTT-----CCEEEEESCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHH--CCCEEEEEeCCchHHHHHHHHHHHhcC-----CcEEEEECCCCCHHHHHHHHH
Confidence 467888888654 455555554322 1579999998875 3444444444433 5677777766654321 1
Q ss_pred ---CCCCcEEEEEEeCCCCCCCCCceeec-----------hhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 169 ---PKSTAVRLVAFNLGYLPGGDKSVITT-----------SETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 169 ---~~~~~~d~ii~~~~~lp~~d~~~~~~-----------~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.....+|+++.+.+.......-.... ......+.+.+.+.++++|.++.+.
T Consensus 118 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 118 ETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 11135899999977643211100011 1223456677788888888876543
No 401
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.05 E-value=0.29 Score=42.76 Aligned_cols=101 Identities=21% Similarity=0.180 Sum_probs=59.3
Q ss_pred CCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCc
Q 041272 95 GDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTA 173 (267)
Q Consensus 95 ~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~ 173 (267)
+.+||=+|+|. |..+..++... +++|+.+|.+++.++.+++.... .+..+..+..++.+... .
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~-----Ga~V~v~dr~~~r~~~~~~~~~~--------~~~~~~~~~~~~~~~~~---~ 230 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL-----GAQVQIFDINVERLSYLETLFGS--------RVELLYSNSAEIETAVA---E 230 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TCEEEEEESCHHHHHHHHHHHGG--------GSEEEECCHHHHHHHHH---T
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CCEEEEEeCCHHHHHHHHHhhCc--------eeEeeeCCHHHHHHHHc---C
Confidence 47999999976 56666666665 35999999999888877654322 22222222233333221 4
Q ss_pred EEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 174 VRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 174 ~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
+|+++...+. +..... .-+.++..+.++|||+++-+.+
T Consensus 231 ~DvVI~~~~~-~~~~~~--------~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 231 ADLLIGAVLV-PGRRAP--------ILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CSEEEECCCC-TTSSCC--------CCBCHHHHTTSCTTCEEEETTC
T ss_pred CCEEEECCCc-CCCCCC--------eecCHHHHhhCCCCCEEEEEec
Confidence 7888876543 111000 0013456678899998865544
No 402
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=92.96 E-value=0.27 Score=41.28 Aligned_cols=85 Identities=9% Similarity=-0.046 Sum_probs=55.2
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhh-hh---c--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRM-EE---I-- 167 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l-~~---~-- 167 (267)
.+.+||=.|++ |.++..+++.+-. .+.+|+.++.+++..+.+.+.+...+ ..++.++..|..+. .. .
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~--~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dl~~~~~~v~~~~~ 83 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSS--NGIMVVLTCRDVTKGHEAVEKLKNSN----HENVVFHQLDVTDPIATMSSLAD 83 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTTT----CCSEEEEECCTTSCHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcC----CCceEEEEccCCCcHHHHHHHHH
Confidence 46678877765 5566666654422 15799999999998888777776644 35677877666554 21 1
Q ss_pred --CCCCCcEEEEEEeCCCCC
Q 041272 168 --VPKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 168 --~~~~~~~d~ii~~~~~lp 185 (267)
......+|+++.|.+...
T Consensus 84 ~~~~~~g~iD~lv~nAg~~~ 103 (311)
T 3o26_A 84 FIKTHFGKLDILVNNAGVAG 103 (311)
T ss_dssp HHHHHHSSCCEEEECCCCCS
T ss_pred HHHHhCCCCCEEEECCcccc
Confidence 111136899999988753
No 403
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=92.92 E-value=0.25 Score=40.67 Aligned_cols=84 Identities=13% Similarity=-0.029 Sum_probs=52.3
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeC-ChHHHHHHHHHHhhccccccccceEEEecChhhhhh---cCC
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDI-QSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE---IVP 169 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~-s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~---~~~ 169 (267)
.+++||=.|+ +|.++..+++.+-. .+.+|+.++. +++..+...+.++..+ .++.++..|..+... ...
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~--~G~~v~~~~r~~~~~~~~~~~~l~~~~-----~~~~~~~~D~~~~~~~~~~~~ 91 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGR--RGASVVVNYGSSSKAAEEVVAELKKLG-----AQGVAIQADISKPSEVVALFD 91 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHH--TTCEEEEEESSCHHHHHHHHHHHHHTT-----CCEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHH--CCCEEEEEcCCchHHHHHHHHHHHhcC-----CcEEEEEecCCCHHHHHHHHH
Confidence 3568887774 56677777665432 1578999998 7777666655555433 456777666554332 111
Q ss_pred ----CCCcEEEEEEeCCCCC
Q 041272 170 ----KSTAVRLVAFNLGYLP 185 (267)
Q Consensus 170 ----~~~~~d~ii~~~~~lp 185 (267)
....+|.++.+.+...
T Consensus 92 ~~~~~~~~~d~vi~~Ag~~~ 111 (274)
T 1ja9_A 92 KAVSHFGGLDFVMSNSGMEV 111 (274)
T ss_dssp HHHHHHSCEEEEECCCCCCC
T ss_pred HHHHHcCCCCEEEECCCCCC
Confidence 0125899999887644
No 404
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.90 E-value=0.29 Score=42.87 Aligned_cols=101 Identities=16% Similarity=0.141 Sum_probs=56.7
Q ss_pred CCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCC
Q 041272 94 KGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKST 172 (267)
Q Consensus 94 ~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 172 (267)
.+++|+=+|+|. |..+..++... +.+|+++|.+++.++.+++.. + ..+.....+..++.+...
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~-----Ga~V~~~d~~~~~~~~~~~~~---g-----~~~~~~~~~~~~l~~~~~--- 228 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGM-----GAQVTILDVNHKRLQYLDDVF---G-----GRVITLTATEANIKKSVQ--- 228 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-----TCEEEEEESCHHHHHHHHHHT---T-----TSEEEEECCHHHHHHHHH---
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CCEEEEEECCHHHHHHHHHhc---C-----ceEEEecCCHHHHHHHHh---
Confidence 357999999854 44444444444 469999999998877665432 2 112222222334433321
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.+|+++.+.+.-.... +.-+.+++.+.+|+||.++.+.
T Consensus 229 ~~DvVi~~~g~~~~~~---------~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 229 HADLLIGAVLVPGAKA---------PKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp HCSEEEECCC----------------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCCEEEECCCCCcccc---------chhHHHHHHHhhcCCCEEEEEe
Confidence 4788887754311000 0012466778889999876543
No 405
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=92.86 E-value=0.94 Score=37.04 Aligned_cols=84 Identities=15% Similarity=0.143 Sum_probs=56.1
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc------
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI------ 167 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~------ 167 (267)
.+.+||=.|++.| ++..+++.+-. -+.+|+.+|.+++.++.+.+.++..+ .++.++..|..+....
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~ 77 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAA--EGFTVFAGRRNGEKLAPLVAEIEAAG-----GRIVARSLDARNEDEVTAFLNA 77 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHH--TTCEEEEEESSGGGGHHHHHHHHHTT-----CEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcC-----CeEEEEECcCCCHHHHHHHHHH
Confidence 3567887776654 55555544322 15799999999998888888776644 5677777666554321
Q ss_pred -CCCCCcEEEEEEeCCCCCC
Q 041272 168 -VPKSTAVRLVAFNLGYLPG 186 (267)
Q Consensus 168 -~~~~~~~d~ii~~~~~lp~ 186 (267)
... ..+|+++.|.+....
T Consensus 78 ~~~~-g~id~lv~nAg~~~~ 96 (252)
T 3h7a_A 78 ADAH-APLEVTIFNVGANVN 96 (252)
T ss_dssp HHHH-SCEEEEEECCCCCCC
T ss_pred HHhh-CCceEEEECCCcCCC
Confidence 111 469999999887543
No 406
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.61 E-value=0.45 Score=41.93 Aligned_cols=42 Identities=21% Similarity=0.282 Sum_probs=34.9
Q ss_pred CCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHH
Q 041272 94 KGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSS 140 (267)
Q Consensus 94 ~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~ 140 (267)
++.+|+=+|+|. |..+..+++.+| ++|+++|.+++.++.+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG-----a~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG-----AKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT-----CEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-----CEEEEEeCCHHHHHHHHH
Confidence 567999999997 777777777774 689999999998887765
No 407
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=92.48 E-value=0.63 Score=38.33 Aligned_cols=120 Identities=15% Similarity=0.121 Sum_probs=68.6
Q ss_pred CCCEEEEecCCCC-hHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc-----
Q 041272 94 KGDTVVDATCGNG-YDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI----- 167 (267)
Q Consensus 94 ~~~~VLDlGcG~G-~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~----- 167 (267)
.|+++|=-|.+++ .++..+|+.+-. -+++|+.+|.+++..+.+.+.+++.+ ..++.++..|..+..+.
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~--~Ga~Vvi~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~ 78 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQ--LGAKLVFTYRKERSRKELEKLLEQLN----QPEAHLYQIDVQSDEEVINGFE 78 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHHHHGGGT----CSSCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhcC----CCcEEEEEccCCCHHHHHHHHH
Confidence 4778888886431 233333332211 06899999999999888888777654 34667776665543221
Q ss_pred --CCCCCcEEEEEEeCCCCCCCCC--cee-echhh-----------HHHHHHHHHhcccCCcEEEEEE
Q 041272 168 --VPKSTAVRLVAFNLGYLPGGDK--SVI-TTSET-----------TKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 168 --~~~~~~~d~ii~~~~~lp~~d~--~~~-~~~~~-----------~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
...-..+|+++.|.+..+..+. .+. ...+. .....+.+...++.||.++.+.
T Consensus 79 ~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnis 146 (256)
T 4fs3_A 79 QIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATT 146 (256)
T ss_dssp HHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred HHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEe
Confidence 1112368999999876432111 111 11111 1223345567778899887654
No 408
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=92.45 E-value=0.35 Score=40.76 Aligned_cols=119 Identities=16% Similarity=0.094 Sum_probs=67.8
Q ss_pred CCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh---cC-
Q 041272 94 KGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE---IV- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~---~~- 168 (267)
.+++||=.|.++ ..++..+++.+-. -+.+|+.+|.+++..+..++..+..+ ++.++..|..+... ..
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~Dv~d~~~v~~~~~ 100 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCA--QGAEVALTYLSETFKKRVDPLAESLG------VKLTVPCDVSDAESVDNMFK 100 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHHHHHHHT------CCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHH--CCCEEEEEeCChHHHHHHHHHHHhcC------CeEEEEcCCCCHHHHHHHHH
Confidence 467888888764 3445444443321 15799999999876666655555433 35666666554332 11
Q ss_pred ---CCCCcEEEEEEeCCCCCCC---CCceeech-----------hhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 169 ---PKSTAVRLVAFNLGYLPGG---DKSVITTS-----------ETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 169 ---~~~~~~d~ii~~~~~lp~~---d~~~~~~~-----------~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.....+|+++.|.+..... ........ .....+.+.+.+.++.+|.++.+.-
T Consensus 101 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 101 VLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 1113689999998765320 00001111 1224456677778888888876543
No 409
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=92.42 E-value=0.69 Score=38.32 Aligned_cols=84 Identities=15% Similarity=0.159 Sum_probs=56.1
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc------
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI------ 167 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~------ 167 (267)
.|+++|=-|.+.| ++..+|+.+-. -+++|+.+|.+++.++.+.+.++..+ .++.++..|..+..+.
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~--~Ga~Vv~~~~~~~~~~~~~~~i~~~g-----~~~~~~~~Dvt~~~~v~~~~~~ 77 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFAL--NDSIVVAVELLEDRLNQIVQELRGMG-----KEVLGVKADVSKKKDVEEFVRR 77 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHH--cCCEEEEEECCHHHHHHHHHHHHhcC-----CcEEEEEccCCCHHHHHHHHHH
Confidence 3667787786665 44444443321 16899999999999998888887755 5677777666544331
Q ss_pred -CCCCCcEEEEEEeCCCCC
Q 041272 168 -VPKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 168 -~~~~~~~d~ii~~~~~lp 185 (267)
...-...|+++.|.+..+
T Consensus 78 ~~~~~G~iDiLVNNAGi~~ 96 (254)
T 4fn4_A 78 TFETYSRIDVLCNNAGIMD 96 (254)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCcccC
Confidence 111246899999988643
No 410
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=92.40 E-value=1.3 Score=36.34 Aligned_cols=121 Identities=13% Similarity=0.128 Sum_probs=68.6
Q ss_pred CCCEEEEecCCCC-hHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C-
Q 041272 94 KGDTVVDATCGNG-YDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G-~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~- 168 (267)
.+.+||=.|++.| .++..+++.+-. .+.+|+.++.++...+.+++.....+ ..++.++..|..+.... .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHE--AGARLIFTYAGERLEKSVHELAGTLD----RNDSIILPCDVTNDAEIETCFA 79 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHHHHHTSS----SCCCEEEECCCSSSHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH--CCCEEEEecCchHHHHHHHHHHHhcC----CCCceEEeCCCCCHHHHHHHHH
Confidence 3668888887632 244444433321 15799999999877666666555543 23677776665543221 1
Q ss_pred ---CCCCcEEEEEEeCCCCCCC---CCceeechhh-----------HHHHHHHHHhcccCCcEEEEEEe
Q 041272 169 ---PKSTAVRLVAFNLGYLPGG---DKSVITTSET-----------TKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 169 ---~~~~~~d~ii~~~~~lp~~---d~~~~~~~~~-----------~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.....+|.++.+.+..... ........+. ...+++.+...++++|.++.+.-
T Consensus 80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 1112589999998765411 1011111111 23456677788888888876653
No 411
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=92.19 E-value=0.85 Score=37.46 Aligned_cols=117 Identities=14% Similarity=0.043 Sum_probs=67.4
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEE-eCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGL-DIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~gi-D~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~- 168 (267)
.+++||=-|++.| ++..+++.+-. -+.+|+.+ +.+++..+.+.+.++..+ .++.++..|..+.... .
T Consensus 7 ~~k~vlVTGas~G-IG~aia~~la~--~G~~V~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~ 78 (259)
T 3edm_A 7 TNRTIVVAGAGRD-IGRACAIRFAQ--EGANVVLTYNGAAEGAATAVAEIEKLG-----RSALAIKADLTNAAEVEAAIS 78 (259)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH--TTCEEEEEECSSCHHHHHHHHHHHTTT-----SCCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHH--CCCEEEEEcCCCHHHHHHHHHHHHhcC-----CceEEEEcCCCCHHHHHHHHH
Confidence 3668888886654 55555544321 15788888 777777777766666544 4677777666554321 1
Q ss_pred ---CCCCcEEEEEEeCCCC-CCCCCceeec-----------hhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 169 ---PKSTAVRLVAFNLGYL-PGGDKSVITT-----------SETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 169 ---~~~~~~d~ii~~~~~l-p~~d~~~~~~-----------~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.....+|+++.|.+.. +.... .... ......+.+.+.+.++++|.++.+.
T Consensus 79 ~~~~~~g~id~lv~nAg~~~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 79 AAADKFGEIHGLVHVAGGLIARKTI-AEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp HHHHHHCSEEEEEECCCCCCCCCCT-TTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHHHhCCCCEEEECCCccCCCCCh-hhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 1113689999998754 22110 0111 1222445666777777778776553
No 412
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=92.12 E-value=0.84 Score=37.45 Aligned_cols=86 Identities=19% Similarity=0.133 Sum_probs=54.5
Q ss_pred CCCEEEEecC-CCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C-
Q 041272 94 KGDTVVDATC-GNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V- 168 (267)
Q Consensus 94 ~~~~VLDlGc-G~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~- 168 (267)
.+++||=.|. |.| ++..+++.+-. -+.+|+.+|.+++.++.+.+.++..+ ..++.++..|..+.... .
T Consensus 21 ~~k~vlITGasg~G-IG~~~a~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dl~~~~~v~~~~~ 93 (266)
T 3o38_A 21 KGKVVLVTAAAGTG-IGSTTARRALL--EGADVVISDYHERRLGETRDQLADLG----LGRVEAVVCDVTSTEAVDALIT 93 (266)
T ss_dssp TTCEEEESSCSSSS-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTTC----SSCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCc-hHHHHHHHHHH--CCCEEEEecCCHHHHHHHHHHHHhcC----CCceEEEEeCCCCHHHHHHHHH
Confidence 4678888887 555 33333332211 15799999999998888877775543 35788887776654331 1
Q ss_pred ---CCCCcEEEEEEeCCCCCC
Q 041272 169 ---PKSTAVRLVAFNLGYLPG 186 (267)
Q Consensus 169 ---~~~~~~d~ii~~~~~lp~ 186 (267)
.....+|+++.+.+....
T Consensus 94 ~~~~~~g~id~li~~Ag~~~~ 114 (266)
T 3o38_A 94 QTVEKAGRLDVLVNNAGLGGQ 114 (266)
T ss_dssp HHHHHHSCCCEEEECCCCCCC
T ss_pred HHHHHhCCCcEEEECCCcCCC
Confidence 111258999999886443
No 413
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=92.12 E-value=2.3 Score=43.50 Aligned_cols=80 Identities=9% Similarity=-0.012 Sum_probs=53.1
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh--------
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE-------- 166 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~-------- 166 (267)
..+++|+.||.|.++.-+.+. |- ...|.++|+++.+++.-+.|.. ...++.++..++..
T Consensus 851 ~l~viDLFsG~GGlslGfe~A-G~---~~vv~avEid~~A~~ty~~N~p---------~~~~~~~DI~~l~~~~~~gdi~ 917 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA-GI---SETLWAIEMWDPAAQAFRLNNP---------GTTVFTEDCNVLLKLVMAGEVT 917 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT-TS---EEEEEEECCSHHHHHHHHHHCT---------TSEEECSCHHHHHHHHTTTCSB
T ss_pred CceEEecccCccHHHHHHHHC-CC---CceEEEEECCHHHHHHHHHhCC---------CCcEeeccHHHHhHhhhccchh
Confidence 458999999999999998765 10 0247899999998887776542 23344444443321
Q ss_pred -----cCCCCCcEEEEEEeCCCCCCC
Q 041272 167 -----IVPKSTAVRLVAFNLGYLPGG 187 (267)
Q Consensus 167 -----~~~~~~~~d~ii~~~~~lp~~ 187 (267)
.++....+|+++..++.=+++
T Consensus 918 ~~~~~~lp~~~~vDvl~GGpPCQ~FS 943 (1330)
T 3av4_A 918 NSLGQRLPQKGDVEMLCGGPPCQGFS 943 (1330)
T ss_dssp CSSCCBCCCTTTCSEEEECCCCTTTC
T ss_pred hhhhhhccccCccceEEecCCCcccc
Confidence 122234689999998765554
No 414
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=92.11 E-value=1.1 Score=37.52 Aligned_cols=118 Identities=13% Similarity=-0.066 Sum_probs=67.0
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCC--hHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQ--SEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s--~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~ 168 (267)
.+++||=.|.+ |.++..+++.+-. -+.+|+.+|.+ +...+...+.++..+ .++.++..|..+.... .
T Consensus 48 ~~k~vlVTGas-~GIG~aia~~la~--~G~~V~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~ 119 (294)
T 3r3s_A 48 KDRKALVTGGD-SGIGRAAAIAYAR--EGADVAINYLPAEEEDAQQVKALIEECG-----RKAVLLPGDLSDESFARSLV 119 (294)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH--TTCEEEEECCGGGHHHHHHHHHHHHHTT-----CCEEECCCCTTSHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH--CCCEEEEEeCCcchhHHHHHHHHHHHcC-----CcEEEEEecCCCHHHHHHHH
Confidence 46688888865 5556555554322 15789999987 334555555554433 5677777666553321 1
Q ss_pred ----CCCCcEEEEEEeCCCCCCCCCceeec-----------hhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 169 ----PKSTAVRLVAFNLGYLPGGDKSVITT-----------SETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 169 ----~~~~~~d~ii~~~~~lp~~d~~~~~~-----------~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.....+|+++.+.+.......-.... ......+.+.+...++++|.++.+.
T Consensus 120 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 120 HKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 11136899999987643211100111 1222456677778888888877654
No 415
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.05 E-value=0.75 Score=37.74 Aligned_cols=114 Identities=11% Similarity=0.078 Sum_probs=67.2
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+++||=.|++. .++..+++.+-. .+.+|+.+|.+++.++...+.+ + .++.++..|..+.... .
T Consensus 7 ~gk~~lVTGas~-gIG~a~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~---~-----~~~~~~~~Dv~~~~~v~~~~~~ 75 (255)
T 4eso_A 7 QGKKAIVIGGTH-GMGLATVRRLVE--GGAEVLLTGRNESNIARIREEF---G-----PRVHALRSDIADLNEIAVLGAA 75 (255)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHH---G-----GGEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHh---C-----CcceEEEccCCCHHHHHHHHHH
Confidence 466888888654 555555554322 1579999999998777665543 2 3566776666554321 1
Q ss_pred --CCCCcEEEEEEeCCCCCCCCCceeechh-----------hHHHHHHHHHhcccCCcEEEEEE
Q 041272 169 --PKSTAVRLVAFNLGYLPGGDKSVITTSE-----------TTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~lp~~d~~~~~~~~-----------~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.....+|+++.|.+........ ....+ ....+.+.+...++++|.++.+.
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~-~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 76 AGQTLGAIDLLHINAGVSELEPFD-QVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp HHHHHSSEEEEEECCCCCCCBCGG-GCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHHhCCCCEEEECCCCCCCCChh-hCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 1113689999998765432110 01111 12345566777777888876653
No 416
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=91.98 E-value=1.3 Score=36.38 Aligned_cols=82 Identities=12% Similarity=0.048 Sum_probs=54.5
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+.+||=.|++ |.++..+++.+-. .+.+|+.++.+++.++...+.+...+ .++.++..|..+.... .
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~ 99 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGS--LGARVVLTARDVEKLRAVEREIVAAG-----GEAESHACDLSHSDAIAAFATG 99 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTT-----CEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHHhC-----CceeEEEecCCCHHHHHHHHHH
Confidence 46688887765 5566666654422 15799999999998888877776644 5677777666544331 1
Q ss_pred --CCCCcEEEEEEeCCC
Q 041272 169 --PKSTAVRLVAFNLGY 183 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~ 183 (267)
.....+|+++.+.+.
T Consensus 100 ~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 100 VLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHhcCCCCEEEECCCc
Confidence 111358999999876
No 417
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=91.91 E-value=0.58 Score=39.48 Aligned_cols=84 Identities=15% Similarity=0.016 Sum_probs=55.6
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+.+||=.|++. .++..+++.+-. .+.+|+.+|.+++.++.+.+.+...+ .++.++..|..+.... .
T Consensus 30 ~gk~vlVTGas~-gIG~~la~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 101 (301)
T 3tjr_A 30 DGRAAVVTGGAS-GIGLATATEFAR--RGARLVLSDVDQPALEQAVNGLRGQG-----FDAHGVVCDVRHLDEMVRLADE 101 (301)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhcC-----CceEEEEccCCCHHHHHHHHHH
Confidence 467888888765 455555544322 15799999999999888877776644 4677777666654332 1
Q ss_pred --CCCCcEEEEEEeCCCCC
Q 041272 169 --PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~lp 185 (267)
.....+|+++.|.+...
T Consensus 102 ~~~~~g~id~lvnnAg~~~ 120 (301)
T 3tjr_A 102 AFRLLGGVDVVFSNAGIVV 120 (301)
T ss_dssp HHHHHSSCSEEEECCCCCC
T ss_pred HHHhCCCCCEEEECCCcCC
Confidence 11126899999988754
No 418
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=91.82 E-value=1.4 Score=37.54 Aligned_cols=86 Identities=15% Similarity=0.127 Sum_probs=55.5
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+.+||=.|++.| ++..+++.+-. .+.+|++++.+++.++.+.+.+...+ ...++.++..|..+.... .
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~--~G~~Vv~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~ 80 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLN--QGCKVAIADIRQDSIDKALATLEAEG---SGPEVMGVQLDVASREGFKMAADE 80 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhcC---CCCeEEEEECCCCCHHHHHHHHHH
Confidence 3568888887655 55555544321 15799999999998888877776544 123677777666554321 1
Q ss_pred --CCCCcEEEEEEeCCCCC
Q 041272 169 --PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~lp 185 (267)
.....+|+++.|.+...
T Consensus 81 ~~~~~g~id~lv~nAg~~~ 99 (319)
T 3ioy_A 81 VEARFGPVSILCNNAGVNL 99 (319)
T ss_dssp HHHHTCCEEEEEECCCCCC
T ss_pred HHHhCCCCCEEEECCCcCC
Confidence 11236899999988643
No 419
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.63 E-value=0.43 Score=40.96 Aligned_cols=67 Identities=19% Similarity=0.112 Sum_probs=44.6
Q ss_pred ceEEE-ecChhhhhhcCCCCCcEEEEEEeCCCCCCCCCc--eeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 153 LVKLF-NMCHSRMEEIVPKSTAVRLVAFNLGYLPGGDKS--VITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 153 ~v~~~-~~~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~--~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
...++ ++|..+....++ +.++|+|+.++||--..+.. ...........+.++.++|+|||.+++...
T Consensus 38 ~~~l~i~gD~l~~L~~l~-~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLP-DDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp EEEEEEECCHHHHHHTSC-TTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cceEEECCcHHHHHHhCc-cCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 45666 888876555544 34899999999984331100 001123456788889999999999988754
No 420
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.52 E-value=0.68 Score=41.09 Aligned_cols=42 Identities=14% Similarity=0.245 Sum_probs=34.9
Q ss_pred CCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHH
Q 041272 94 KGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSS 140 (267)
Q Consensus 94 ~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~ 140 (267)
++.+|+=+|+|. |..+..++..+| ++|+++|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG-----a~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG-----AVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-----CEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC-----CEEEEEcCCHHHHHHHHH
Confidence 568999999997 777777787764 699999999988877765
No 421
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=91.44 E-value=1.2 Score=36.76 Aligned_cols=85 Identities=14% Similarity=0.059 Sum_probs=55.8
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh-------
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE------- 166 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~------- 166 (267)
.|+++|=-|.+.| ++..+|+.+-. -+++|+.+|++++.++.+.+.+.+.+ .++..+..|..+...
T Consensus 8 ~gKvalVTGas~G-IG~aia~~la~--~Ga~Vvi~~~~~~~~~~~~~~l~~~g-----~~~~~~~~Dv~~~~~v~~~~~~ 79 (255)
T 4g81_D 8 TGKTALVTGSARG-LGFAYAEGLAA--AGARVILNDIRATLLAESVDTLTRKG-----YDAHGVAFDVTDELAIEAAFSK 79 (255)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHH--TTCEEEECCSCHHHHHHHHHHHHHTT-----CCEEECCCCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhcC-----CcEEEEEeeCCCHHHHHHHHHH
Confidence 4667777676554 55555544322 16899999999999988888877755 466666665554322
Q ss_pred cCCCCCcEEEEEEeCCCCCC
Q 041272 167 IVPKSTAVRLVAFNLGYLPG 186 (267)
Q Consensus 167 ~~~~~~~~d~ii~~~~~lp~ 186 (267)
.......+|+++.|.+..+.
T Consensus 80 ~~~~~G~iDiLVNNAG~~~~ 99 (255)
T 4g81_D 80 LDAEGIHVDILINNAGIQYR 99 (255)
T ss_dssp HHHTTCCCCEEEECCCCCCC
T ss_pred HHHHCCCCcEEEECCCCCCC
Confidence 12223479999999887443
No 422
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=91.43 E-value=0.46 Score=51.80 Aligned_cols=102 Identities=17% Similarity=0.149 Sum_probs=66.9
Q ss_pred hhcCCCCEEEEecC-CC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh-
Q 041272 90 HVVRKGDTVVDATC-GN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE- 166 (267)
Q Consensus 90 ~~l~~~~~VLDlGc-G~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~- 166 (267)
..+++|++||=.|. |. |..++.+|+..| ++|++++.+++..+.+++.....+ ... ++.....++.+
T Consensus 1663 a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~G-----a~Viat~~s~~k~~~l~~~~~~lg----a~~--v~~~~~~~~~~~ 1731 (2512)
T 2vz8_A 1663 GRMQPGESVLIHSGSGGVGQAAIAIALSRG-----CRVFTTVGSAEKRAYLQARFPQLD----ETC--FANSRDTSFEQH 1731 (2512)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT-----CEEEEEESCHHHHHHHHHHCTTCC----STT--EEESSSSHHHHH
T ss_pred hcCCCCCEEEEEeCChHHHHHHHHHHHHcC-----CEEEEEeCChhhhHHHHhhcCCCC----ceE--EecCCCHHHHHH
Confidence 35789999999974 44 888889999864 699999999988888876543222 111 11111112211
Q ss_pred --cCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEE
Q 041272 167 --IVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMV 218 (267)
Q Consensus 167 --~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 218 (267)
.......+|+++-..+ ...++...+.|++||+++..
T Consensus 1732 i~~~t~g~GvDvVld~~g----------------~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1732 VLRHTAGKGVDLVLNSLA----------------EEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp HHHTTTSCCEEEEEECCC----------------HHHHHHHHTTEEEEEEEEEC
T ss_pred HHHhcCCCCceEEEECCC----------------chHHHHHHHhcCCCcEEEEe
Confidence 1112235898887631 26788999999999998764
No 423
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.38 E-value=0.71 Score=34.72 Aligned_cols=42 Identities=19% Similarity=0.224 Sum_probs=27.7
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHH
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKST 138 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a 138 (267)
.++++|+=+|+| .++..+++.+.. -+.+|+++|.+++.++.+
T Consensus 17 ~~~~~v~IiG~G--~iG~~la~~L~~--~g~~V~vid~~~~~~~~~ 58 (155)
T 2g1u_A 17 QKSKYIVIFGCG--RLGSLIANLASS--SGHSVVVVDKNEYAFHRL 58 (155)
T ss_dssp CCCCEEEEECCS--HHHHHHHHHHHH--TTCEEEEEESCGGGGGGS
T ss_pred cCCCcEEEECCC--HHHHHHHHHHHh--CCCeEEEEECCHHHHHHH
Confidence 457899999875 555555544321 146899999998765443
No 424
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.33 E-value=0.32 Score=44.42 Aligned_cols=89 Identities=10% Similarity=0.059 Sum_probs=55.2
Q ss_pred cCCCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 92 VRKGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 92 l~~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
...|++|+=+|+|. |.....+++.. +.+|+++|.++...+.|++ .+ ++.+ +..+ ..
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~-----Ga~Viv~d~~~~~~~~A~~----~G-------a~~~--~l~e---~l-- 327 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ-----GARVSVTEIDPINALQAMM----EG-------FDVV--TVEE---AI-- 327 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-----TCEEEEECSCHHHHHHHHH----TT-------CEEC--CHHH---HG--
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHH----cC-------CEEe--cHHH---HH--
Confidence 56789999999876 55555566554 3699999999987766653 22 1211 1222 22
Q ss_pred CCcEEEEEEeCCCCCCCCCceeechhhHHHHH-HHHHhcccCCcEEEEEE
Q 041272 171 STAVRLVAFNLGYLPGGDKSVITTSETTKMAL-EAAERILIPGGLISMVV 219 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l-~~~~~~LkpgG~l~i~~ 219 (267)
...|+++...+. . .++ .+..+.+|+||+++.+.
T Consensus 328 -~~aDvVi~atgt---~------------~~i~~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 328 -GDADIVVTATGN---K------------DIIMLEHIKAMKDHAILGNIG 361 (494)
T ss_dssp -GGCSEEEECSSS---S------------CSBCHHHHHHSCTTCEEEECS
T ss_pred -hCCCEEEECCCC---H------------HHHHHHHHHhcCCCcEEEEeC
Confidence 146788776321 1 112 25667789999986544
No 425
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=91.33 E-value=0.46 Score=39.37 Aligned_cols=117 Identities=15% Similarity=0.067 Sum_probs=66.2
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEE-eCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGL-DIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~gi-D~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~- 168 (267)
.+.++|=-|++.| ++..+++.+-. -+.+|+.+ +.+++..+...+.++..+ .++.++..|..+.... .
T Consensus 26 ~~k~~lVTGas~G-IG~aia~~la~--~G~~Vv~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~v~~~~~ 97 (267)
T 3u5t_A 26 TNKVAIVTGASRG-IGAAIAARLAS--DGFTVVINYAGKAAAAEEVAGKIEAAG-----GKALTAQADVSDPAAVRRLFA 97 (267)
T ss_dssp -CCEEEEESCSSH-HHHHHHHHHHH--HTCEEEEEESSCSHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHH--CCCEEEEEcCCCHHHHHHHHHHHHhcC-----CeEEEEEcCCCCHHHHHHHHH
Confidence 4678888786654 44444443311 05688877 456666666666555543 4677776666554321 1
Q ss_pred ---CCCCcEEEEEEeCCCCCCCCCceeech-----------hhHHHHHHHHHhcccCCcEEEEEE
Q 041272 169 ---PKSTAVRLVAFNLGYLPGGDKSVITTS-----------ETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 169 ---~~~~~~d~ii~~~~~lp~~d~~~~~~~-----------~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.....+|+++.|.+..+..... .... .....+++.+.+.++++|.++.+.
T Consensus 98 ~~~~~~g~iD~lvnnAG~~~~~~~~-~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 98 TAEEAFGGVDVLVNNAGIMPLTTIA-ETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp HHHHHHSCEEEEEECCCCCCCCCGG-GCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCCCCCChh-hCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 1113699999998875443211 1111 112345667777778888877654
No 426
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=91.28 E-value=1.6 Score=35.91 Aligned_cols=83 Identities=13% Similarity=0.014 Sum_probs=54.3
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+++||=.|++.| ++..+++.+-. .+.+|+.+|.+++.++...+.+...+ .++.++..|..+.... .
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~ 81 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAE--QGADLVLAARTVERLEDVAKQVTDTG-----RRALSVGTDITDDAQVAHLVDE 81 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHH--CcCEEEEEeCCHHHHHHHHHHHHhcC-----CcEEEEEcCCCCHHHHHHHHHH
Confidence 4678888887665 44444443321 15799999999998888877776644 5677777666654321 1
Q ss_pred --CCCCcEEEEEEeCCCC
Q 041272 169 --PKSTAVRLVAFNLGYL 184 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~l 184 (267)
.....+|+++.|.+..
T Consensus 82 ~~~~~g~id~lv~nAg~~ 99 (264)
T 3ucx_A 82 TMKAYGRVDVVINNAFRV 99 (264)
T ss_dssp HHHHTSCCSEEEECCCSC
T ss_pred HHHHcCCCcEEEECCCCC
Confidence 1123689999998664
No 427
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.24 E-value=2.2 Score=31.17 Aligned_cols=72 Identities=7% Similarity=-0.074 Sum_probs=42.8
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCC-CCCc
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVP-KSTA 173 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-~~~~ 173 (267)
.++|+=+|+| .++..+++.+.. -+.+|+++|.+++.++.+++. .+.++.++..+...+.. .-..
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~--~g~~V~~id~~~~~~~~~~~~-----------~~~~~~gd~~~~~~l~~~~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTA--AGKKVLAVDKSKEKIELLEDE-----------GFDAVIADPTDESFYRSLDLEG 70 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHH--TTCCEEEEESCHHHHHHHHHT-----------TCEEEECCTTCHHHHHHSCCTT
T ss_pred CCEEEEECCC--HHHHHHHHHHHH--CCCeEEEEECCHHHHHHHHHC-----------CCcEEECCCCCHHHHHhCCccc
Confidence 4578888884 566666655432 146899999999887776541 23455555543322110 1124
Q ss_pred EEEEEEeC
Q 041272 174 VRLVAFNL 181 (267)
Q Consensus 174 ~d~ii~~~ 181 (267)
+|.++...
T Consensus 71 ~d~vi~~~ 78 (141)
T 3llv_A 71 VSAVLITG 78 (141)
T ss_dssp CSEEEECC
T ss_pred CCEEEEec
Confidence 77777763
No 428
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=91.19 E-value=0.71 Score=38.95 Aligned_cols=41 Identities=15% Similarity=0.049 Sum_probs=30.0
Q ss_pred CEEEEecCCC-Ch-HHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHH
Q 041272 96 DTVVDATCGN-GY-DTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLL 142 (267)
Q Consensus 96 ~~VLDlGcG~-G~-~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~ 142 (267)
.+|.=||+|. |. ++..+++. +.+|+.+|.+++.++.+++.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~------G~~V~~~d~~~~~~~~~~~~i 58 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT------GHTVVLVDQTEDILAKSKKGI 58 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHHHHHHHHHH
Confidence 4789999986 43 44555544 468999999999988876543
No 429
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=91.14 E-value=1.6 Score=35.35 Aligned_cols=77 Identities=13% Similarity=0.033 Sum_probs=46.9
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh------cC
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE------IV 168 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~------~~ 168 (267)
+++||=.|+ +|.++..+++.+-. +.+|+.++.+++.++...+ ..++.++..|..+... ..
T Consensus 5 ~k~vlITGa-s~gIG~~~a~~l~~---g~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~ 70 (245)
T 3e9n_A 5 KKIAVVTGA-TGGMGIEIVKDLSR---DHIVYALGRNPEHLAALAE----------IEGVEPIESDIVKEVLEEGGVDKL 70 (245)
T ss_dssp -CEEEEEST-TSHHHHHHHHHHTT---TSEEEEEESCHHHHHHHHT----------STTEEEEECCHHHHHHTSSSCGGG
T ss_pred CCEEEEEcC-CCHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHh----------hcCCcceecccchHHHHHHHHHHH
Confidence 567777775 56677788877654 5789999999887665543 1345666655554321 12
Q ss_pred CCCCcEEEEEEeCCCCC
Q 041272 169 PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 169 ~~~~~~d~ii~~~~~lp 185 (267)
.....+|+++.+.+...
T Consensus 71 ~~~~~id~lv~~Ag~~~ 87 (245)
T 3e9n_A 71 KNLDHVDTLVHAAAVAR 87 (245)
T ss_dssp TTCSCCSEEEECC----
T ss_pred HhcCCCCEEEECCCcCC
Confidence 22236899999987644
No 430
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=91.07 E-value=1.1 Score=36.99 Aligned_cols=118 Identities=14% Similarity=0.038 Sum_probs=68.1
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeC-ChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDI-QSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~-s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~- 168 (267)
.++++|=.|++. .++..+++.+-. -+.+|+.++. +++..+...+.++..+ .++.++..|..+.... .
T Consensus 17 ~~k~~lVTGas~-gIG~aia~~l~~--~G~~V~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 17 DGKVALVTGSGR-GIGAAVAVHLGR--LGAKVVVNYANSTKDAEKVVSEIKALG-----SDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp TTCEEEESCTTS-HHHHHHHHHHHH--TTCEEEEEESSCHHHHHHHHHHHHHTT-----CCEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHH--CCCEEEEEcCCCHHHHHHHHHHHHhcC-----CcEEEEEcCCCCHHHHHHHHH
Confidence 366888888654 455555554322 1578988775 4555666666555543 5677777666654321 1
Q ss_pred ---CCCCcEEEEEEeCCCCCCCCCceeech-----------hhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 169 ---PKSTAVRLVAFNLGYLPGGDKSVITTS-----------ETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 169 ---~~~~~~d~ii~~~~~lp~~d~~~~~~~-----------~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.....+|+++.|.+........ .... .....+.+.+.+.++++|.++.+.-
T Consensus 89 ~~~~~~g~id~lvnnAg~~~~~~~~-~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVVSFGHLK-DVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGG-GCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcc-cCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 1112589999998775432211 0111 1223456677788888888776543
No 431
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.01 E-value=1.5 Score=37.59 Aligned_cols=98 Identities=14% Similarity=0.107 Sum_probs=58.7
Q ss_pred CEEEEecCCC-C-hHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhc-------cc-------cccccceEEEec
Q 041272 96 DTVVDATCGN-G-YDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKT-------TS-------KAEKGLVKLFNM 159 (267)
Q Consensus 96 ~~VLDlGcG~-G-~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~-------~~-------~~~~~~v~~~~~ 159 (267)
.+|-=||+|+ | .++..+++. +.+|+++|++++.++.+++++.++ +. .....++++..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~------G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~- 79 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCT- 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEEC-
T ss_pred ceEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeC-
Confidence 4777888876 2 344455544 468999999999999887654321 10 00011344332
Q ss_pred ChhhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEE
Q 041272 160 CHSRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLIS 216 (267)
Q Consensus 160 ~~~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 216 (267)
++.+.. ...|+|+...+. .......+++++...++|+.+++
T Consensus 80 ---~~~eav---~~aDlVieavpe----------~~~~k~~v~~~l~~~~~~~~Ii~ 120 (319)
T 2dpo_A 80 ---NLAEAV---EGVVHIQECVPE----------NLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp ---CHHHHT---TTEEEEEECCCS----------CHHHHHHHHHHHHTTCCSSSEEE
T ss_pred ---CHHHHH---hcCCEEEEeccC----------CHHHHHHHHHHHHhhCCCCeEEE
Confidence 222222 258999988421 22345678888988989888663
No 432
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=90.99 E-value=1.7 Score=35.33 Aligned_cols=88 Identities=8% Similarity=0.025 Sum_probs=54.3
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.++++|=.|++.| ++..+++.+-. .+.+|+.++.+++.++.+.+.+..... ...++.++..|..+.... .
T Consensus 6 ~~k~~lVTGas~G-IG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~ 80 (250)
T 3nyw_A 6 QKGLAIITGASQG-IGAVIAAGLAT--DGYRVVLIARSKQNLEKVHDEIMRSNK--HVQEPIVLPLDITDCTKADTEIKD 80 (250)
T ss_dssp CCCEEEEESTTSH-HHHHHHHHHHH--HTCEEEEEESCHHHHHHHHHHHHHHCT--TSCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHHhcc--ccCcceEEeccCCCHHHHHHHHHH
Confidence 3567887776654 44444443321 057999999999988887777655420 014667776666554321 1
Q ss_pred --CCCCcEEEEEEeCCCCCC
Q 041272 169 --PKSTAVRLVAFNLGYLPG 186 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~lp~ 186 (267)
.....+|+++.+.+....
T Consensus 81 ~~~~~g~iD~lvnnAg~~~~ 100 (250)
T 3nyw_A 81 IHQKYGAVDILVNAAAMFMD 100 (250)
T ss_dssp HHHHHCCEEEEEECCCCCCC
T ss_pred HHHhcCCCCEEEECCCcCCC
Confidence 111369999999887543
No 433
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=90.95 E-value=0.8 Score=37.98 Aligned_cols=117 Identities=17% Similarity=0.118 Sum_probs=66.9
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCC-hHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQ-SEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s-~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~- 168 (267)
.+++||=.|++. .++..+++.+-. .+.+|+.++.. .+..+...+.++..+ .++.++..|..+.... .
T Consensus 30 ~gk~~lVTGas~-GIG~aia~~la~--~G~~V~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~Dv~d~~~v~~~~~ 101 (271)
T 3v2g_A 30 AGKTAFVTGGSR-GIGAAIAKRLAL--EGAAVALTYVNAAERAQAVVSEIEQAG-----GRAVAIRADNRDAEAIEQAIR 101 (271)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHH--TTCEEEEEESSCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHH--CCCEEEEEeCCCHHHHHHHHHHHHhcC-----CcEEEEECCCCCHHHHHHHHH
Confidence 467888888765 455555544322 15789988655 455555555555433 4677777666554321 1
Q ss_pred ---CCCCcEEEEEEeCCCCCCCCCceeech-----------hhHHHHHHHHHhcccCCcEEEEEE
Q 041272 169 ---PKSTAVRLVAFNLGYLPGGDKSVITTS-----------ETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 169 ---~~~~~~d~ii~~~~~lp~~d~~~~~~~-----------~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.....+|+++.+.+........ .... .....+++.+.+.++++|.++.+.
T Consensus 102 ~~~~~~g~iD~lvnnAg~~~~~~~~-~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 102 ETVEALGGLDILVNSAGIWHSAPLE-ETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGG-GCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHHHcCCCcEEEECCCCCCCCChh-hCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 1112689999998775432111 0111 122345667778888888876653
No 434
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=90.95 E-value=1 Score=37.87 Aligned_cols=85 Identities=11% Similarity=0.113 Sum_probs=52.7
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCC------------hHHHHHHHHHHhhccccccccceEEEecCh
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQ------------SEALKSTSSLLDKTTSKAEKGLVKLFNMCH 161 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s------------~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~ 161 (267)
.+.++|=.|++.| ++..+++.+-. -+.+|+.+|.+ ++.++.+.+.++..+ .++.++..|.
T Consensus 27 ~gk~~lVTGas~G-IG~aia~~la~--~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv 98 (299)
T 3t7c_A 27 EGKVAFITGAARG-QGRSHAITLAR--EGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG-----RRIIASQVDV 98 (299)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHH--TTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT-----CCEEEEECCT
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHH--CCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC-----CceEEEECCC
Confidence 4668888887654 45555443321 16799999987 666666666665543 5677777766
Q ss_pred hhhhhc---C----CCCCcEEEEEEeCCCCCC
Q 041272 162 SRMEEI---V----PKSTAVRLVAFNLGYLPG 186 (267)
Q Consensus 162 ~~l~~~---~----~~~~~~d~ii~~~~~lp~ 186 (267)
.+.... . .....+|+++.|.+....
T Consensus 99 ~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~ 130 (299)
T 3t7c_A 99 RDFDAMQAAVDDGVTQLGRLDIVLANAALASE 130 (299)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 654331 1 111368999999876543
No 435
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=90.81 E-value=0.54 Score=38.96 Aligned_cols=85 Identities=14% Similarity=0.120 Sum_probs=52.7
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCC------------hHHHHHHHHHHhhccccccccceEEEecCh
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQ------------SEALKSTSSLLDKTTSKAEKGLVKLFNMCH 161 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s------------~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~ 161 (267)
.+.+||=-|++ |.++..+++.+-. -+.+|+.+|.+ ++.++...+.+...+ .++.++..|.
T Consensus 12 ~gk~vlVTGas-~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~D~ 83 (278)
T 3sx2_A 12 TGKVAFITGAA-RGQGRAHAVRLAA--DGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG-----SRIVARQADV 83 (278)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH--TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT-----CCEEEEECCT
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHH--CCCeEEEEecccccccccccccchHHHHHHHHHHHhcC-----CeEEEEeCCC
Confidence 36688887755 4555555554322 15799999987 666666666555543 5677777766
Q ss_pred hhhhhc---CC----CCCcEEEEEEeCCCCCC
Q 041272 162 SRMEEI---VP----KSTAVRLVAFNLGYLPG 186 (267)
Q Consensus 162 ~~l~~~---~~----~~~~~d~ii~~~~~lp~ 186 (267)
.+.... .. ....+|+++.|.+..+.
T Consensus 84 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~ 115 (278)
T 3sx2_A 84 RDRESLSAALQAGLDELGRLDIVVANAGIAPM 115 (278)
T ss_dssp TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 654321 11 11258999999887543
No 436
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=90.76 E-value=2.5 Score=34.40 Aligned_cols=84 Identities=14% Similarity=0.070 Sum_probs=51.6
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecCh--hhh---hhc-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCH--SRM---EEI- 167 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~--~~l---~~~- 167 (267)
.+++||=.|.+ |.++..+++.+-. -+.+|+.+|.+++.++.+.+.+...+ ..++.++..|. .+. ...
T Consensus 11 ~~k~vlVTGas-~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~ 83 (252)
T 3f1l_A 11 NDRIILVTGAS-DGIGREAAMTYAR--YGATVILLGRNEEKLRQVASHINEET----GRQPQWFILDLLTCTSENCQQLA 83 (252)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHHH----SCCCEEEECCTTTCCHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhhc----CCCceEEEEecccCCHHHHHHHH
Confidence 46688877755 4555555554322 15799999999998887777665533 23556665554 222 111
Q ss_pred ---CCCCCcEEEEEEeCCCC
Q 041272 168 ---VPKSTAVRLVAFNLGYL 184 (267)
Q Consensus 168 ---~~~~~~~d~ii~~~~~l 184 (267)
......+|+++.|.+..
T Consensus 84 ~~~~~~~g~id~lv~nAg~~ 103 (252)
T 3f1l_A 84 QRIAVNYPRLDGVLHNAGLL 103 (252)
T ss_dssp HHHHHHCSCCSEEEECCCCC
T ss_pred HHHHHhCCCCCEEEECCccC
Confidence 11123689999998764
No 437
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=90.73 E-value=1.4 Score=39.15 Aligned_cols=46 Identities=15% Similarity=0.092 Sum_probs=35.3
Q ss_pred CEEEEecCCCChHHHHHHHhcCCCCCCcE----EEEEeCChHHHHHHHHHHhh
Q 041272 96 DTVVDATCGNGYDTLMMLKMVADESSAGC----VYGLDIQSEALKSTSSLLDK 144 (267)
Q Consensus 96 ~~VLDlGcG~G~~~~~la~~~~~~~p~~~----v~giD~s~~~i~~a~~~~~~ 144 (267)
.+|+|+.||.|.....+-+.... -.- |.++|+++.+++.-+.|...
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~---~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARS---KNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHH---HTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCc---cccceeeEEEEecCHHHHHHHHHHcCC
Confidence 48999999999999888775210 012 77899999999888877653
No 438
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.71 E-value=2.4 Score=30.56 Aligned_cols=41 Identities=20% Similarity=0.214 Sum_probs=27.6
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHH
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTS 139 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~ 139 (267)
+++|+=+|+ |.++..+++.+.. .+.+|+.+|.+++.++..+
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~--~g~~v~~~d~~~~~~~~~~ 44 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSE--KGHDIVLIDIDKDICKKAS 44 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHH
T ss_pred CCEEEEECC--CHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHH
Confidence 468888876 5666666654422 1468999999988766554
No 439
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=90.69 E-value=0.66 Score=38.43 Aligned_cols=84 Identities=5% Similarity=-0.007 Sum_probs=53.9
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C---
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V--- 168 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~--- 168 (267)
+++||=.|++. .++..+++.+-. .+.+|+.+|.+++.++.+.+.++..+ .++.++..|..+.... .
T Consensus 4 ~k~~lVTGas~-GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~ 75 (264)
T 3tfo_A 4 DKVILITGASG-GIGEGIARELGV--AGAKILLGARRQARIEAIATEIRDAG-----GTALAQVLDVTDRHSVAAFAQAA 75 (264)
T ss_dssp TCEEEESSTTS-HHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHHHTT-----CEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCcc-HHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhcC-----CcEEEEEcCCCCHHHHHHHHHHH
Confidence 56778777664 455555554322 15799999999998888877776644 4566666665543221 1
Q ss_pred -CCCCcEEEEEEeCCCCCC
Q 041272 169 -PKSTAVRLVAFNLGYLPG 186 (267)
Q Consensus 169 -~~~~~~d~ii~~~~~lp~ 186 (267)
.....+|+++.|.+..+.
T Consensus 76 ~~~~g~iD~lVnnAG~~~~ 94 (264)
T 3tfo_A 76 VDTWGRIDVLVNNAGVMPL 94 (264)
T ss_dssp HHHHSCCCEEEECCCCCCC
T ss_pred HHHcCCCCEEEECCCCCCC
Confidence 111368999999887543
No 440
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=90.59 E-value=1.1 Score=37.01 Aligned_cols=84 Identities=18% Similarity=0.108 Sum_probs=54.0
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+++||=.|+ +|.++..+++.+-. -+.+|+.+|.+++.++...+.++..+ .++.++..|..+.... .
T Consensus 30 ~~k~vlITGa-sggIG~~la~~L~~--~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dl~~~~~v~~~~~~ 101 (272)
T 1yb1_A 30 TGEIVLITGA-GHGIGRLTAYEFAK--LKSKLVLWDINKHGLEETAAKCKGLG-----AKVHTFVVDCSNREDIYSSAKK 101 (272)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHH--CCCEEEEEEcCHHHHHHHHHHHHhcC-----CeEEEEEeeCCCHHHHHHHHHH
Confidence 4567887775 46677666665432 15789999999988777666665533 4677777665543221 1
Q ss_pred --CCCCcEEEEEEeCCCCC
Q 041272 169 --PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~lp 185 (267)
.....+|+++.+.+...
T Consensus 102 ~~~~~g~iD~li~~Ag~~~ 120 (272)
T 1yb1_A 102 VKAEIGDVSILVNNAGVVY 120 (272)
T ss_dssp HHHHTCCCSEEEECCCCCC
T ss_pred HHHHCCCCcEEEECCCcCC
Confidence 11125899999987654
No 441
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.52 E-value=0.45 Score=41.85 Aligned_cols=42 Identities=17% Similarity=0.227 Sum_probs=33.8
Q ss_pred CCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHH
Q 041272 94 KGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSS 140 (267)
Q Consensus 94 ~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~ 140 (267)
++.+|+=+|+|. |..+..+++.+| .+|+.+|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-----a~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG-----AVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-----CEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-----CEEEEEeCCHHHHHHHHH
Confidence 578999999987 777777777764 579999999887776654
No 442
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=90.41 E-value=1.5 Score=36.40 Aligned_cols=85 Identities=15% Similarity=0.185 Sum_probs=52.1
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCC----------------hHHHHHHHHHHhhccccccccceEEE
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQ----------------SEALKSTSSLLDKTTSKAEKGLVKLF 157 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s----------------~~~i~~a~~~~~~~~~~~~~~~v~~~ 157 (267)
.+++||=-|++.| ++..+++.+-. .+.+|+.+|.+ ++.++...+.+...+ .++.++
T Consensus 10 ~~k~~lVTGas~g-IG~aia~~la~--~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 81 (286)
T 3uve_A 10 EGKVAFVTGAARG-QGRSHAVRLAQ--EGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN-----RRIVTA 81 (286)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHH--TTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT-----CCEEEE
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHH--CCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC-----CceEEE
Confidence 3668888887655 45555543321 15799999987 666666665555433 567777
Q ss_pred ecChhhhhhc---C----CCCCcEEEEEEeCCCCCC
Q 041272 158 NMCHSRMEEI---V----PKSTAVRLVAFNLGYLPG 186 (267)
Q Consensus 158 ~~~~~~l~~~---~----~~~~~~d~ii~~~~~lp~ 186 (267)
..|..+.... . .....+|+++.|.+....
T Consensus 82 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~ 117 (286)
T 3uve_A 82 EVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNG 117 (286)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred EcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCC
Confidence 7666544321 1 111268999999887543
No 443
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=90.38 E-value=1.2 Score=37.14 Aligned_cols=84 Identities=11% Similarity=0.066 Sum_probs=51.8
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+++||=.|++ |.++..+++.+-. -+.+|+.+|.+++.++.+.+.+...+ ...+.++..|..+.... .
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~ 104 (281)
T 4dry_A 32 EGRIALVTGGG-TGVGRGIAQALSA--EGYSVVITGRRPDVLDAAAGEIGGRT----GNIVRAVVCDVGDPDQVAALFAA 104 (281)
T ss_dssp --CEEEETTTT-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHHH----SSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhcC----CCeEEEEEcCCCCHHHHHHHHHH
Confidence 46678877755 5566666654422 15799999999998887777665543 23346666666544321 1
Q ss_pred --CCCCcEEEEEEeCCCC
Q 041272 169 --PKSTAVRLVAFNLGYL 184 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~l 184 (267)
.....+|+++.+.+..
T Consensus 105 ~~~~~g~iD~lvnnAG~~ 122 (281)
T 4dry_A 105 VRAEFARLDLLVNNAGSN 122 (281)
T ss_dssp HHHHHSCCSEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 1113589999998764
No 444
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.35 E-value=1.6 Score=37.20 Aligned_cols=88 Identities=15% Similarity=0.146 Sum_probs=50.8
Q ss_pred CEEEEecCCC-C-hHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh-cCCCCC
Q 041272 96 DTVVDATCGN-G-YDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE-IVPKST 172 (267)
Q Consensus 96 ~~VLDlGcG~-G-~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~-~~~~~~ 172 (267)
++|.=||+|. | .++..+++. |. ..+|+++|.+++.++.+++ .+ -+.-... ++.+ .. .
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-G~---~~~V~~~dr~~~~~~~a~~----~G------~~~~~~~---~~~~~~~---~ 93 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-GF---KGKIYGYDINPESISKAVD----LG------IIDEGTT---SIAKVED---F 93 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-TC---CSEEEEECSCHHHHHHHHH----TT------SCSEEES---CTTGGGG---G
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CC---CCEEEEEECCHHHHHHHHH----CC------CcchhcC---CHHHHhh---c
Confidence 6899999775 3 233333333 11 1289999999988777654 22 1111111 1121 11 1
Q ss_pred cEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEE
Q 041272 173 AVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLI 215 (267)
Q Consensus 173 ~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l 215 (267)
..|+|+...+ +....++++++...+++|.++
T Consensus 94 ~aDvVilavp------------~~~~~~vl~~l~~~l~~~~iv 124 (314)
T 3ggo_A 94 SPDFVMLSSP------------VRTFREIAKKLSYILSEDATV 124 (314)
T ss_dssp CCSEEEECSC------------GGGHHHHHHHHHHHSCTTCEE
T ss_pred cCCEEEEeCC------------HHHHHHHHHHHhhccCCCcEE
Confidence 4678877742 123457888888889998765
No 445
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=90.33 E-value=1.3 Score=36.96 Aligned_cols=147 Identities=12% Similarity=0.053 Sum_probs=81.0
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh---c---
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE---I--- 167 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~---~--- 167 (267)
.|+++|=-|.+.| ++..+|+.+-. -+++|+.+|.+++.++.+.+.+ + .++..+..|..+..+ .
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~--~Ga~V~i~~r~~~~l~~~~~~~---g-----~~~~~~~~Dv~~~~~v~~~~~~ 96 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVA--EGARVFITGRRKDVLDAAIAEI---G-----GGAVGIQADSANLAELDRLYEK 96 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHH---C-----TTCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHc---C-----CCeEEEEecCCCHHHHHHHHHH
Confidence 4677887787665 45444443322 1689999999999887765544 2 345555555544322 1
Q ss_pred -CCCCCcEEEEEEeCCCCCCCCCceeech-----------hhHHHHHHHHHhcccCCcEEEEEEe-cCC---CCChh---
Q 041272 168 -VPKSTAVRLVAFNLGYLPGGDKSVITTS-----------ETTKMALEAAERILIPGGLISMVVY-VGH---PGGRE--- 228 (267)
Q Consensus 168 -~~~~~~~d~ii~~~~~lp~~d~~~~~~~-----------~~~~~~l~~~~~~LkpgG~l~i~~~-~~~---~~~~~--- 228 (267)
...-+.+|+++.|.+..+..... .... ...-...+.+.+.++.+|.++.+.- .+. +....
T Consensus 97 ~~~~~G~iDiLVNNAG~~~~~~~~-~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~a 175 (273)
T 4fgs_A 97 VKAEAGRIDVLFVNAGGGSMLPLG-EVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAA 175 (273)
T ss_dssp HHHHHSCEEEEEECCCCCCCCCTT-SCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCChh-hccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHH
Confidence 11224799999998764332111 1111 2223455777888888887765432 111 11111
Q ss_pred hH----HHHHHHHHhCCCCceEEEEEee
Q 041272 229 EL----EAVEAFARSLSVDDWICCKFQM 252 (267)
Q Consensus 229 ~~----~~~~~~~~~l~~~~~~~~~~~~ 252 (267)
.. ...+.+..++...+.++....+
T Consensus 176 sKaav~~ltr~lA~Ela~~gIrVN~V~P 203 (273)
T 4fgs_A 176 SKAALRSFARNWILDLKDRGIRINTLSP 203 (273)
T ss_dssp HHHHHHHHHHHHHHHTTTSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEee
Confidence 01 1234455677777777665544
No 446
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=90.27 E-value=2 Score=34.62 Aligned_cols=84 Identities=11% Similarity=0.073 Sum_probs=54.9
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc-------
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI------- 167 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~------- 167 (267)
+++||=.|++ |.++..+++.+-. .+.+|+.++.+++..+...+.++..+ .++.++..|..+....
T Consensus 5 ~k~vlITGas-~gIG~~~a~~l~~--~G~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 5 EKVALVTGAS-RGIGFEVAHALAS--KGATVVGTATSQASAEKFENSMKEKG-----FKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCC-ChHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcC-----CceEEEEecCCCHHHHHHHHHHH
Confidence 5677877754 5566555554422 15799999999998888777776644 4677777666554321
Q ss_pred CCCCCcEEEEEEeCCCCCC
Q 041272 168 VPKSTAVRLVAFNLGYLPG 186 (267)
Q Consensus 168 ~~~~~~~d~ii~~~~~lp~ 186 (267)
......+|+++.+.+..+.
T Consensus 77 ~~~~~~id~li~~Ag~~~~ 95 (247)
T 3lyl_A 77 KAENLAIDILVNNAGITRD 95 (247)
T ss_dssp HHTTCCCSEEEECCCCCCC
T ss_pred HHHcCCCCEEEECCCCCCC
Confidence 1122368999999877543
No 447
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=90.20 E-value=1 Score=37.61 Aligned_cols=99 Identities=12% Similarity=0.061 Sum_probs=56.1
Q ss_pred CEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccc--------------ccccceEEEecCh
Q 041272 96 DTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSK--------------AEKGLVKLFNMCH 161 (267)
Q Consensus 96 ~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~--------------~~~~~v~~~~~~~ 161 (267)
.+|.=||+|+ ++..+|..+-. -+.+|+.+|.+++.++.+++.+...... ....++...
T Consensus 5 ~kV~VIGaG~--mG~~iA~~la~--~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~---- 76 (283)
T 4e12_A 5 TNVTVLGTGV--LGSQIAFQTAF--HGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYS---- 76 (283)
T ss_dssp CEEEEECCSH--HHHHHHHHHHH--TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEE----
T ss_pred CEEEEECCCH--HHHHHHHHHHh--CCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEe----
Confidence 4777788765 43333332211 0468999999999998888764321100 001123332
Q ss_pred hhhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEE
Q 041272 162 SRMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLI 215 (267)
Q Consensus 162 ~~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l 215 (267)
.++.+.. ...|+|+...+. ..+....+++++...++|+.++
T Consensus 77 ~~~~~~~---~~aDlVi~av~~----------~~~~~~~v~~~l~~~~~~~~il 117 (283)
T 4e12_A 77 DDLAQAV---KDADLVIEAVPE----------SLDLKRDIYTKLGELAPAKTIF 117 (283)
T ss_dssp SCHHHHT---TTCSEEEECCCS----------CHHHHHHHHHHHHHHSCTTCEE
T ss_pred CCHHHHh---ccCCEEEEeccC----------cHHHHHHHHHHHHhhCCCCcEE
Confidence 1222222 146888877321 2335567888888888988766
No 448
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=90.11 E-value=2.1 Score=34.90 Aligned_cols=83 Identities=13% Similarity=0.048 Sum_probs=50.9
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh---cCC-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE---IVP- 169 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~---~~~- 169 (267)
.+++||=.|. +|.++..+++.+-. .+.+|+.++.+++.++...+.+...+ .++.++..|..+... ...
T Consensus 13 ~~k~vlVTGa-s~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~D~~~~~~~~~~~~~ 84 (260)
T 2zat_A 13 ENKVALVTAS-TDGIGLAIARRLAQ--DGAHVVVSSRKQENVDRTVATLQGEG-----LSVTGTVCHVGKAEDRERLVAM 84 (260)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcC-----CceEEEEccCCCHHHHHHHHHH
Confidence 3567887775 55666666654422 15799999999987776666555433 356666655543322 110
Q ss_pred ---CCCcEEEEEEeCCCC
Q 041272 170 ---KSTAVRLVAFNLGYL 184 (267)
Q Consensus 170 ---~~~~~d~ii~~~~~l 184 (267)
....+|+++.+.+..
T Consensus 85 ~~~~~g~iD~lv~~Ag~~ 102 (260)
T 2zat_A 85 AVNLHGGVDILVSNAAVN 102 (260)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 112589999998764
No 449
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=90.10 E-value=3 Score=34.42 Aligned_cols=85 Identities=12% Similarity=0.020 Sum_probs=53.8
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+++||=.|.+ |.++..+++.+-. .+.+|+.+|.+++.++.+.+.++..+. ...++.++..|..+.... .
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~ 84 (281)
T 3svt_A 10 QDRTYLVTGGG-SGIGKGVAAGLVA--AGASVMIVGRNPDKLAGAVQELEALGA--NGGAIRYEPTDITNEDETARAVDA 84 (281)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTTCC--SSCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHHhCC--CCceEEEEeCCCCCHHHHHHHHHH
Confidence 35678887765 4555555554322 157999999999988888777766441 112677777766654321 1
Q ss_pred --CCCCcEEEEEEeCCC
Q 041272 169 --PKSTAVRLVAFNLGY 183 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~ 183 (267)
.....+|+++.+.+.
T Consensus 85 ~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 85 VTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 111258999999875
No 450
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=89.96 E-value=2 Score=37.84 Aligned_cols=87 Identities=8% Similarity=0.031 Sum_probs=52.4
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChH---HHHHHHHHHhhccc----cccccceEEEecChhhhhhc
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSE---ALKSTSSLLDKTTS----KAEKGLVKLFNMCHSRMEEI 167 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~---~i~~a~~~~~~~~~----~~~~~~v~~~~~~~~~l~~~ 167 (267)
+++||=.| |+|.++..+++.+-. .+.+|++++.++. ..+...+.++.... .....++.++.+|..+...+
T Consensus 69 ~~~vlVTG-atG~iG~~l~~~L~~--~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 145 (427)
T 4f6c_A 69 LGNTLLTG-ATGFLGAYLIEALQG--YSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 145 (427)
T ss_dssp CEEEEEEC-TTSHHHHHHHHHHTT--TEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred CCEEEEec-CCcHHHHHHHHHHHc--CCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence 45788777 578888888877643 2579999998887 44444443322100 00135788888777664443
Q ss_pred CCCCCcEEEEEEeCCCCC
Q 041272 168 VPKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 168 ~~~~~~~d~ii~~~~~lp 185 (267)
. ....+|+|+.+.+...
T Consensus 146 ~-~~~~~d~Vih~A~~~~ 162 (427)
T 4f6c_A 146 V-LPENMDTIIHAGARTD 162 (427)
T ss_dssp C-CSSCCSEEEECCCCC-
T ss_pred C-CcCCCCEEEECCcccC
Confidence 3 3457899998876643
No 451
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=89.95 E-value=5.6 Score=33.75 Aligned_cols=110 Identities=15% Similarity=0.086 Sum_probs=66.8
Q ss_pred CEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh-hhhc-----CC
Q 041272 96 DTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR-MEEI-----VP 169 (267)
Q Consensus 96 ~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~-----~~ 169 (267)
..|++||||-=.....+.. + ++.+|+=|| .|+.++..++.+.+.+. ....+..++..|..+ +.+. +.
T Consensus 104 ~QvV~LGaGlDTra~Rl~~--~---~~~~v~evD-~P~vi~~k~~lL~~~~~-~~~~~~~~v~~Dl~d~~~~~l~~~g~d 176 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDW--P---TGTTVYEID-QPKVLAYKSTTLAEHGV-TPTADRREVPIDLRQDWPPALRSAGFD 176 (310)
T ss_dssp CEEEEETCTTCCHHHHSCC--C---TTCEEEEEE-CHHHHHHHHHHHHHTTC-CCSSEEEEEECCTTSCHHHHHHHTTCC
T ss_pred CeEEEeCCCCCchhhhccC--C---CCcEEEEcC-CHHHHHHHHHHHHhcCC-CCCCCeEEEecchHhhHHHHHHhccCC
Confidence 5799999997665433321 1 147899999 69999999998875331 013456677665543 2211 11
Q ss_pred CCCcEEEEEEe-CCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEec
Q 041272 170 KSTAVRLVAFN-LGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYV 221 (267)
Q Consensus 170 ~~~~~d~ii~~-~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 221 (267)
.+.+.-++... +.|+ ..+...++++.+...+.||+.+++....
T Consensus 177 ~~~Pt~~i~Egvl~Yl---------~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 177 PSARTAWLAEGLLMYL---------PATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp TTSCEEEEECSCGGGS---------CHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CCCCEEEEEechHhhC---------CHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 22233233222 1222 2345678999999988899998776553
No 452
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=89.89 E-value=0.14 Score=49.67 Aligned_cols=95 Identities=16% Similarity=0.223 Sum_probs=58.3
Q ss_pred hcCCCCEEEEecC-CC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhh----h
Q 041272 91 VVRKGDTVVDATC-GN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSR----M 164 (267)
Q Consensus 91 ~l~~~~~VLDlGc-G~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~----l 164 (267)
.+++|++||=.|+ |. |..++.+|+..| ++|++++.++ ..+. ++ .+ ... ++.....+ +
T Consensus 342 ~l~~G~~VLI~gaaGgvG~~aiqlAk~~G-----a~V~~t~~~~-k~~~----l~-lg----a~~--v~~~~~~~~~~~i 404 (795)
T 3slk_A 342 GLRPGESLLVHSAAGGVGMAAIQLARHLG-----AEVYATASED-KWQA----VE-LS----REH--LASSRTCDFEQQF 404 (795)
T ss_dssp CCCTTCCEEEESTTBHHHHHHHHHHHHTT-----CCEEEECCGG-GGGG----SC-SC----GGG--EECSSSSTHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHcC-----CEEEEEeChH-Hhhh----hh-cC----hhh--eeecCChhHHHHH
Confidence 4678999999995 44 899999999874 6899998554 2111 11 22 111 11111112 2
Q ss_pred hhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEE
Q 041272 165 EEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 165 ~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.+.. ....+|+++-..+- ..++...+.|+|||+++...
T Consensus 405 ~~~t-~g~GvDvVld~~gg----------------~~~~~~l~~l~~~Gr~v~iG 442 (795)
T 3slk_A 405 LGAT-GGRGVDVVLNSLAG----------------EFADASLRMLPRGGRFLELG 442 (795)
T ss_dssp HHHS-CSSCCSEEEECCCT----------------TTTHHHHTSCTTCEEEEECC
T ss_pred HHHc-CCCCeEEEEECCCc----------------HHHHHHHHHhcCCCEEEEec
Confidence 2222 22358888876421 35678899999999997653
No 453
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=89.88 E-value=1.3 Score=36.34 Aligned_cols=86 Identities=16% Similarity=0.086 Sum_probs=55.4
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+++||=.|.+ |.++..+++.+-. -+.+|+.+|.+++.++.+.+.++..+ ..++.++..|..+.... .
T Consensus 9 ~~k~vlVTGas-~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dv~~~~~v~~~~~~ 81 (262)
T 3pk0_A 9 QGRSVVVTGGT-KGIGRGIATVFAR--AGANVAVAGRSTADIDACVADLDQLG----SGKVIGVQTDVSDRAQCDALAGR 81 (262)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTTS----SSCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhhC----CCcEEEEEcCCCCHHHHHHHHHH
Confidence 35677777754 5566666554422 15799999999998888777776543 25677777666654321 1
Q ss_pred --CCCCcEEEEEEeCCCCCC
Q 041272 169 --PKSTAVRLVAFNLGYLPG 186 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~lp~ 186 (267)
.....+|+++.+.+..+.
T Consensus 82 ~~~~~g~id~lvnnAg~~~~ 101 (262)
T 3pk0_A 82 AVEEFGGIDVVCANAGVFPD 101 (262)
T ss_dssp HHHHHSCCSEEEECCCCCCC
T ss_pred HHHHhCCCCEEEECCCCCCC
Confidence 111258999999877543
No 454
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=89.77 E-value=1.9 Score=35.42 Aligned_cols=86 Identities=13% Similarity=0.097 Sum_probs=53.3
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhh---hcCCC
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRME---EIVPK 170 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~---~~~~~ 170 (267)
.+++||=.|++ |.++..+++.+-. -+.+|+.+|.+++.++.+.+.+...+ ....+.++..|..+.. .....
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~D~~~~~~~~~~~~~ 82 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVA--EGANVLINGRREENVNETIKEIRAQY---PDAILQPVVADLGTEQGCQDVIEK 82 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHHHHC---TTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhhC---CCceEEEEecCCCCHHHHHHHHHh
Confidence 35678877755 5566565554322 15799999999988887777665543 1235566665554432 22222
Q ss_pred CCcEEEEEEeCCCCC
Q 041272 171 STAVRLVAFNLGYLP 185 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp 185 (267)
-..+|+++.|.+...
T Consensus 83 ~g~id~lv~nAg~~~ 97 (267)
T 3t4x_A 83 YPKVDILINNLGIFE 97 (267)
T ss_dssp CCCCSEEEECCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 236899999987644
No 455
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=89.74 E-value=2.5 Score=36.93 Aligned_cols=102 Identities=12% Similarity=0.032 Sum_probs=67.8
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCCCCc
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPKSTA 173 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~ 173 (267)
.+.+||.++.+-|.++..++.. .++.+.=|--.-..++.|+..++. ...++.+... +. .....
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~--------~~~~~~ds~~~~~~~~~n~~~~~~--~~~~~~~~~~----~~---~~~~~ 100 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH--------KPYSIGDSYISELATRENLRLNGI--DESSVKFLDS----TA---DYPQQ 100 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG--------CCEEEESCHHHHHHHHHHHHHTTC--CGGGSEEEET----TS---CCCSS
T ss_pred CCCCEEEECCCCCHHHHhhccC--------CceEEEhHHHHHHHHHHHHHHcCC--CccceEeccc----cc---ccccC
Confidence 4578999999999999988753 345664466666678888888772 1123555421 11 11236
Q ss_pred EEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEecC
Q 041272 174 VRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVYVG 222 (267)
Q Consensus 174 ~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 222 (267)
+|+++.-+ |.. .......|.++...|+||+.+++..-.+
T Consensus 101 ~~~v~~~l---pk~-------~~~l~~~L~~l~~~l~~~~~i~~~g~~~ 139 (375)
T 4dcm_A 101 PGVVLIKV---PKT-------LALLEQQLRALRKVVTSDTRIIAGAKAR 139 (375)
T ss_dssp CSEEEEEC---CSC-------HHHHHHHHHHHHTTCCTTSEEEEEEEGG
T ss_pred CCEEEEEc---CCC-------HHHHHHHHHHHHhhCCCCCEEEEEeccc
Confidence 88888763 222 3445677888999999999997766543
No 456
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=89.74 E-value=1.1 Score=36.84 Aligned_cols=86 Identities=12% Similarity=0.022 Sum_probs=53.5
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+.+||=.|++.| ++..+++.+-. -+.+|+.+|.+++.++.+.+.+.... ...++.++..|..+.... .
T Consensus 7 ~~k~~lVTGas~G-IG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~ 80 (265)
T 3lf2_A 7 SEAVAVVTGGSSG-IGLATVELLLE--AGAAVAFCARDGERLRAAESALRQRF---PGARLFASVCDVLDALQVRAFAEA 80 (265)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHHS---TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHHhc---CCceEEEEeCCCCCHHHHHHHHHH
Confidence 3567888886654 55555544322 15799999999998888777776522 023477776666543321 1
Q ss_pred --CCCCcEEEEEEeCCCCC
Q 041272 169 --PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~lp 185 (267)
.....+|+++.|.+..+
T Consensus 81 ~~~~~g~id~lvnnAg~~~ 99 (265)
T 3lf2_A 81 CERTLGCASILVNNAGQGR 99 (265)
T ss_dssp HHHHHCSCSEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 11125899999987643
No 457
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=89.72 E-value=0.69 Score=38.35 Aligned_cols=84 Identities=8% Similarity=-0.005 Sum_probs=52.7
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh---cC--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE---IV-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~---~~-- 168 (267)
.+++||=-|+ +|.++..+++.+-. .+.+|+.+|.+++.++...+.++..+ .++.++..|..+... ..
T Consensus 27 ~~k~~lVTGa-s~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 98 (270)
T 3ftp_A 27 DKQVAIVTGA-SRGIGRAIALELAR--RGAMVIGTATTEAGAEGIGAAFKQAG-----LEGRGAVLNVNDATAVDALVES 98 (270)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHHHHT-----CCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcC-----CcEEEEEEeCCCHHHHHHHHHH
Confidence 3567777675 45566655554322 15799999999988887777776544 456666655554322 11
Q ss_pred --CCCCcEEEEEEeCCCCC
Q 041272 169 --PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~lp 185 (267)
.....+|+++.|.+...
T Consensus 99 ~~~~~g~iD~lvnnAg~~~ 117 (270)
T 3ftp_A 99 TLKEFGALNVLVNNAGITQ 117 (270)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 11125899999987644
No 458
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=89.72 E-value=1.6 Score=35.88 Aligned_cols=117 Identities=16% Similarity=0.081 Sum_probs=66.8
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCCh---HHHHHHHHHHhhccccccccceEEEecChhhhhhc---
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQS---EALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI--- 167 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~---~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~--- 167 (267)
.+.+||=.|.+ |.++..+++.+-. -+.+|+.++.+. +.++...+.++..+ .++.++..|..+....
T Consensus 10 ~~k~vlVTGas-~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~ 81 (262)
T 3ksu_A 10 KNKVIVIAGGI-KNLGALTAKTFAL--ESVNLVLHYHQAKDSDTANKLKDELEDQG-----AKVALYQSDLSNEEEVAKL 81 (262)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHTT--SSCEEEEEESCGGGHHHHHHHHHHHHTTT-----CEEEEEECCCCSHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH--CCCEEEEEecCccCHHHHHHHHHHHHhcC-----CcEEEEECCCCCHHHHHHH
Confidence 35678877765 5567777765543 167899987654 34444444444433 4677777666544321
Q ss_pred C----CCCCcEEEEEEeCCCCCCCCCceeechh-----------hHHHHHHHHHhcccCCcEEEEEE
Q 041272 168 V----PKSTAVRLVAFNLGYLPGGDKSVITTSE-----------TTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 168 ~----~~~~~~d~ii~~~~~lp~~d~~~~~~~~-----------~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
. .....+|+++.|.+........ ....+ ....+.+.+.+.++++|.++.+.
T Consensus 82 ~~~~~~~~g~iD~lvnnAg~~~~~~~~-~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 82 FDFAEKEFGKVDIAINTVGKVLKKPIV-ETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHHHHHHHCSEEEEEECCCCCCSSCGG-GCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcc-cCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 1 1113699999998875432111 11111 12345566677777788876653
No 459
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=89.50 E-value=1.3 Score=36.75 Aligned_cols=117 Identities=14% Similarity=0.041 Sum_probs=64.2
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHH-HHHHHHHHhhccccccccceEEEecChhhhhh---cC-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEA-LKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE---IV- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~-i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~---~~- 168 (267)
.+++||=.|++ |.++..+++.+-. -+.+|+.++.++.. .+.+.+.+...+ .++.++..|..+... ..
T Consensus 28 ~~k~vlVTGas-~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~ 99 (283)
T 1g0o_A 28 EGKVALVTGAG-RGIGREMAMELGR--RGCKVIVNYANSTESAEEVVAAIKKNG-----SDAACVKANVGVVEDIVRMFE 99 (283)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHH--TTCEEEEEESSCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH--CCCEEEEEeCCchHHHHHHHHHHHHhC-----CCeEEEEcCCCCHHHHHHHHH
Confidence 35678777755 5566666654422 15799999988643 444444444433 456666666544322 11
Q ss_pred ---CCCCcEEEEEEeCCCCCCCCCceeech-----------hhHHHHHHHHHhcccCCcEEEEEE
Q 041272 169 ---PKSTAVRLVAFNLGYLPGGDKSVITTS-----------ETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 169 ---~~~~~~d~ii~~~~~lp~~d~~~~~~~-----------~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.....+|+++.+.+........ .... .....+++.+.+.++.+|.++.+.
T Consensus 100 ~~~~~~g~iD~lv~~Ag~~~~~~~~-~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 100 EAVKIFGKLDIVCSNSGVVSFGHVK-DVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGG-GCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcc-cCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 0112589999998765332110 0111 122345566677777778776654
No 460
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=89.43 E-value=1.2 Score=36.53 Aligned_cols=118 Identities=10% Similarity=0.014 Sum_probs=68.4
Q ss_pred CCCEEEEecCC-CChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc-----
Q 041272 94 KGDTVVDATCG-NGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI----- 167 (267)
Q Consensus 94 ~~~~VLDlGcG-~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~----- 167 (267)
.+++||=.|++ +|.++..+++.+-. -+.+|+.++.++...+.+++..+.. .++.++..|..+....
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~ 84 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKR--EGAELAFTYVGDRFKDRITEFAAEF------GSELVFPCDVADDAQIDALFA 84 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHHHHHHT------TCCCEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHH--cCCCEEEEecchhhHHHHHHHHHHc------CCcEEEECCCCCHHHHHHHHH
Confidence 57799999975 35566666554422 1579999999876666555544443 2466666665543321
Q ss_pred --CCCCCcEEEEEEeCCCCCCC---CCcee-ech-----------hhHHHHHHHHHhcccCCcEEEEEE
Q 041272 168 --VPKSTAVRLVAFNLGYLPGG---DKSVI-TTS-----------ETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 168 --~~~~~~~d~ii~~~~~lp~~---d~~~~-~~~-----------~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
......+|+++.+.+..+.. ..... ... .....+.+.+.+.++++|.++.+.
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 11123699999998875421 00001 111 112345566777777788776654
No 461
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=89.41 E-value=0.81 Score=37.24 Aligned_cols=83 Identities=12% Similarity=0.096 Sum_probs=52.4
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C---
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V--- 168 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~--- 168 (267)
++++|=.|++ |.++..+++.+-. .+.+|+.++.+++.++...+.+...+ .++.++..|..+.... .
T Consensus 7 ~k~~lVTGas-~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dv~~~~~~~~~~~~~ 78 (247)
T 2jah_A 7 GKVALITGAS-SGIGEATARALAA--EGAAVAIAARRVEKLRALGDELTAAG-----AKVHVLELDVADRQGVDAAVAST 78 (247)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhcC-----CcEEEEECCCCCHHHHHHHHHHH
Confidence 5678887755 5566666654422 15799999999988777666665433 4567776665543221 1
Q ss_pred -CCCCcEEEEEEeCCCCC
Q 041272 169 -PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 169 -~~~~~~d~ii~~~~~lp 185 (267)
.....+|+++.+.+...
T Consensus 79 ~~~~g~id~lv~nAg~~~ 96 (247)
T 2jah_A 79 VEALGGLDILVNNAGIML 96 (247)
T ss_dssp HHHHSCCSEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 01125899999987643
No 462
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=89.36 E-value=1.5 Score=35.87 Aligned_cols=85 Identities=9% Similarity=0.036 Sum_probs=54.1
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+++||=-|++. .++..+++.+-. -+.+|+.+|.+++..+...+.+...+ .++.++..|..+.... .
T Consensus 11 ~~k~vlVTGas~-gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 82 (256)
T 3gaf_A 11 NDAVAIVTGAAA-GIGRAIAGTFAK--AGASVVVTDLKSEGAEAVAAAIRQAG-----GKAIGLECNVTDEQHREAVIKA 82 (256)
T ss_dssp TTCEEEECSCSS-HHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcC-----CcEEEEECCCCCHHHHHHHHHH
Confidence 456788777655 455554443311 05799999999988888777776644 5677777666554321 1
Q ss_pred --CCCCcEEEEEEeCCCCCC
Q 041272 169 --PKSTAVRLVAFNLGYLPG 186 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~lp~ 186 (267)
.....+|+++.|.+....
T Consensus 83 ~~~~~g~id~lv~nAg~~~~ 102 (256)
T 3gaf_A 83 ALDQFGKITVLVNNAGGGGP 102 (256)
T ss_dssp HHHHHSCCCEEEECCCCCCC
T ss_pred HHHHcCCCCEEEECCCCCCC
Confidence 111258999999877543
No 463
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=89.29 E-value=1.6 Score=34.93 Aligned_cols=84 Identities=14% Similarity=-0.042 Sum_probs=53.1
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh---cCCC-
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE---IVPK- 170 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~---~~~~- 170 (267)
+++||=.|++ |.++..+++.+-. -+.+|+.++.+++.++.+.+.+.... ..++.++..|..+... ....
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~ 74 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALAR--DGYALALGARSVDRLEKIAHELMQEQ----GVEVFYHHLDVSKAESVEEFSKKV 74 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHHH----CCCEEEEECCTTCHHHHHHHCC-H
T ss_pred CCEEEEECCC-cHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhhc----CCeEEEEEeccCCHHHHHHHHHHH
Confidence 4567777754 5566666655422 15789999999988877776664221 2567777766665433 2221
Q ss_pred ---CCcEEEEEEeCCCCC
Q 041272 171 ---STAVRLVAFNLGYLP 185 (267)
Q Consensus 171 ---~~~~d~ii~~~~~lp 185 (267)
...+|+++.+.+..+
T Consensus 75 ~~~~g~id~li~~Ag~~~ 92 (235)
T 3l77_A 75 LERFGDVDVVVANAGLGY 92 (235)
T ss_dssp HHHHSSCSEEEECCCCCC
T ss_pred HHhcCCCCEEEECCcccc
Confidence 126899999987644
No 464
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=89.15 E-value=2.3 Score=34.78 Aligned_cols=86 Identities=15% Similarity=0.016 Sum_probs=52.3
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---CC-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---VP- 169 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~~- 169 (267)
.+++||=.|++ |.++..+++.+-. .+.+|+.+|.+++.++.+.+.+.... ...++.++..|..+.... ..
T Consensus 12 ~~k~vlVTGas-~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~ 85 (267)
T 1iy8_A 12 TDRVVLITGGG-SGLGRATAVRLAA--EGAKLSLVDVSSEGLEASKAAVLETA---PDAEVLTTVADVSDEAQVEAYVTA 85 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHHC---TTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhhc---CCceEEEEEccCCCHHHHHHHHHH
Confidence 35678887764 5566666554422 15799999999988776666554431 024566776665543321 11
Q ss_pred ---CCCcEEEEEEeCCCCC
Q 041272 170 ---KSTAVRLVAFNLGYLP 185 (267)
Q Consensus 170 ---~~~~~d~ii~~~~~lp 185 (267)
....+|+++.+.+...
T Consensus 86 ~~~~~g~id~lv~nAg~~~ 104 (267)
T 1iy8_A 86 TTERFGRIDGFFNNAGIEG 104 (267)
T ss_dssp HHHHHSCCSEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCcCC
Confidence 1125899999987643
No 465
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=89.13 E-value=0.97 Score=37.57 Aligned_cols=85 Identities=11% Similarity=0.067 Sum_probs=54.6
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---CC-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---VP- 169 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~~- 169 (267)
.+++||=.|.+. .++..+++.+-. -+.+|+.+|.+++.++...+.+...+ .++.++..|..+.... ..
T Consensus 31 ~gk~~lVTGas~-GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dl~d~~~v~~~~~~ 102 (276)
T 3r1i_A 31 SGKRALITGAST-GIGKKVALAYAE--AGAQVAVAARHSDALQVVADEIAGVG-----GKALPIRCDVTQPDQVRGMLDQ 102 (276)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHH--TTCEEEEEESSGGGGHHHHHHHHHTT-----CCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcC-----CeEEEEEcCCCCHHHHHHHHHH
Confidence 467888877664 555555544322 15799999999988887777776544 4667776666544321 11
Q ss_pred ---CCCcEEEEEEeCCCCCC
Q 041272 170 ---KSTAVRLVAFNLGYLPG 186 (267)
Q Consensus 170 ---~~~~~d~ii~~~~~lp~ 186 (267)
....+|+++.|.+....
T Consensus 103 ~~~~~g~iD~lvnnAg~~~~ 122 (276)
T 3r1i_A 103 MTGELGGIDIAVCNAGIVSV 122 (276)
T ss_dssp HHHHHSCCSEEEECCCCCCC
T ss_pred HHHHcCCCCEEEECCCCCCC
Confidence 11258999999877543
No 466
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=89.10 E-value=1.3 Score=35.86 Aligned_cols=84 Identities=14% Similarity=0.055 Sum_probs=53.5
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh---cCC-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE---IVP- 169 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~---~~~- 169 (267)
.+++||=.| |+|.++..+++.+-. .+.+|+.+|.+++..+...+.++..+ .++.++..|..+... ...
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~ 81 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFAT--AGASVVVSDINADAANHVVDEIQQLG-----GQAFACRCDITSEQELSALADF 81 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHT--TTCEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHHHHHhC-----CceEEEEcCCCCHHHHHHHHHH
Confidence 356787777 567777777775533 15799999999987776666555433 456676666554322 111
Q ss_pred ---CCCcEEEEEEeCCCCC
Q 041272 170 ---KSTAVRLVAFNLGYLP 185 (267)
Q Consensus 170 ---~~~~~d~ii~~~~~lp 185 (267)
....+|+++.+.+...
T Consensus 82 ~~~~~~~~d~vi~~Ag~~~ 100 (255)
T 1fmc_A 82 AISKLGKVDILVNNAGGGG 100 (255)
T ss_dssp HHHHHSSCCEEEECCCCCC
T ss_pred HHHhcCCCCEEEECCCCCC
Confidence 0125899999887643
No 467
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=89.04 E-value=0.3 Score=40.39 Aligned_cols=116 Identities=11% Similarity=0.149 Sum_probs=64.6
Q ss_pred CCCEEEEecC-CCChHHHHHHHhcCCCCCCcEEEEEeCChHH-HHHHHHHHhhccccccccceEEEecChhhhhh---cC
Q 041272 94 KGDTVVDATC-GNGYDTLMMLKMVADESSAGCVYGLDIQSEA-LKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE---IV 168 (267)
Q Consensus 94 ~~~~VLDlGc-G~G~~~~~la~~~~~~~p~~~v~giD~s~~~-i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~---~~ 168 (267)
.+++||=.|+ |+|.++..+++.+-. -+.+|+.+|.+++. ++...+.+ + .++.++..|..+... ..
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~---~-----~~~~~~~~Dv~~~~~v~~~~ 75 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQE--QGAQLVLTGFDRLRLIQRITDRL---P-----AKAPLLELDVQNEEHLASLA 75 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHH--TTCEEEEEECSCHHHHHHHHTTS---S-----SCCCEEECCTTCHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHH--CCCEEEEEecChHHHHHHHHHhc---C-----CCceEEEccCCCHHHHHHHH
Confidence 3578998898 477777777765432 15789999998754 23332211 1 345556555544322 11
Q ss_pred C----CCC---cEEEEEEeCCCCCCC---CCcee-echhh-----------HHHHHHHHHhcccCCcEEEEEE
Q 041272 169 P----KST---AVRLVAFNLGYLPGG---DKSVI-TTSET-----------TKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 169 ~----~~~---~~d~ii~~~~~lp~~---d~~~~-~~~~~-----------~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
. ... .+|+++.+.+..+.. ...+. ...++ ...+.+.+.+.++++|.++.+.
T Consensus 76 ~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (269)
T 2h7i_A 76 GRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD 148 (269)
T ss_dssp HHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence 1 011 699999998765410 00111 11111 2345566677777778777654
No 468
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=89.03 E-value=1.3 Score=37.16 Aligned_cols=87 Identities=13% Similarity=0.028 Sum_probs=52.8
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh---cCC-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE---IVP- 169 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~---~~~- 169 (267)
.+++||=.|+ +|.++..+++.+-. -+.+|+.++.+++.++...+.+...+. ...++.++..|..+... ...
T Consensus 25 ~~k~vlVTGa-s~gIG~aia~~L~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~ 99 (297)
T 1xhl_A 25 SGKSVIITGS-SNGIGRSAAVIFAK--EGAQVTITGRNEDRLEETKQQILKAGV--PAEKINAVVADVTEASGQDDIINT 99 (297)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTTC--CGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcCC--CCceEEEEecCCCCHHHHHHHHHH
Confidence 3567877775 55666666654422 157999999999887776666554330 01157777666654332 111
Q ss_pred ---CCCcEEEEEEeCCCCC
Q 041272 170 ---KSTAVRLVAFNLGYLP 185 (267)
Q Consensus 170 ---~~~~~d~ii~~~~~lp 185 (267)
....+|+++.+.+...
T Consensus 100 ~~~~~g~iD~lvnnAG~~~ 118 (297)
T 1xhl_A 100 TLAKFGKIDILVNNAGANL 118 (297)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHhcCCCCEEEECCCcCc
Confidence 1125899999987643
No 469
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=88.95 E-value=1.8 Score=35.92 Aligned_cols=82 Identities=12% Similarity=0.009 Sum_probs=50.6
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeC-ChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDI-QSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~-s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~- 168 (267)
.+.+||=.|++. .++..+++.+-. .+.+|+.+|. +++.++...+.+...+ .++.++..|..+.... .
T Consensus 28 ~~k~~lVTGas~-GIG~aia~~la~--~G~~V~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~ 99 (280)
T 4da9_A 28 ARPVAIVTGGRR-GIGLGIARALAA--SGFDIAITGIGDAEGVAPVIAELSGLG-----ARVIFLRADLADLSSHQATVD 99 (280)
T ss_dssp CCCEEEEETTTS-HHHHHHHHHHHH--TTCEEEEEESCCHHHHHHHHHHHHHTT-----CCEEEEECCTTSGGGHHHHHH
T ss_pred CCCEEEEecCCC-HHHHHHHHHHHH--CCCeEEEEeCCCHHHHHHHHHHHHhcC-----CcEEEEEecCCCHHHHHHHHH
Confidence 456788777655 455555544322 1579999995 7777776666665543 5677777766654321 1
Q ss_pred ---CCCCcEEEEEEeCCC
Q 041272 169 ---PKSTAVRLVAFNLGY 183 (267)
Q Consensus 169 ---~~~~~~d~ii~~~~~ 183 (267)
.....+|+++.+.+.
T Consensus 100 ~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 100 AVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHHHSCCCEEEEECC-
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 111258999999876
No 470
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=88.85 E-value=1.8 Score=35.41 Aligned_cols=84 Identities=13% Similarity=0.035 Sum_probs=52.4
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh---cCC-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE---IVP- 169 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~---~~~- 169 (267)
.+++||=.|. +|.++..+++.+-. .+.+|+.+|.+++.++...+.+...+ .++.++..|..+... ...
T Consensus 8 ~~k~vlVTGa-s~giG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~ 79 (260)
T 2ae2_A 8 EGCTALVTGG-SRGIGYGIVEELAS--LGASVYTCSRNQKELNDCLTQWRSKG-----FKVEASVCDLSSRSERQELMNT 79 (260)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTT-----CEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcC-----CcEEEEEcCCCCHHHHHHHHHH
Confidence 3567887775 55666666654422 15799999999988776666555433 456677666554322 110
Q ss_pred ---CC-CcEEEEEEeCCCCC
Q 041272 170 ---KS-TAVRLVAFNLGYLP 185 (267)
Q Consensus 170 ---~~-~~~d~ii~~~~~lp 185 (267)
.. ..+|+++.+.+...
T Consensus 80 ~~~~~~g~id~lv~~Ag~~~ 99 (260)
T 2ae2_A 80 VANHFHGKLNILVNNAGIVI 99 (260)
T ss_dssp HHHHTTTCCCEEEECCCCCC
T ss_pred HHHHcCCCCCEEEECCCCCC
Confidence 01 36899999987643
No 471
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=88.84 E-value=1.2 Score=36.93 Aligned_cols=84 Identities=15% Similarity=0.102 Sum_probs=52.2
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeC-------------ChHHHHHHHHHHhhccccccccceEEEecC
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDI-------------QSEALKSTSSLLDKTTSKAEKGLVKLFNMC 160 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~-------------s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~ 160 (267)
.+++||=.|.+. .++..+++.+-. .+.+|+.+|. +++.++...+.+...+ .++.++..|
T Consensus 14 ~gk~~lVTGas~-gIG~a~a~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~D 85 (280)
T 3pgx_A 14 QGRVAFITGAAR-GQGRSHAVRLAA--EGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG-----RKALTRVLD 85 (280)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHH--TTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT-----CCEEEEECC
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHH--CCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-----CeEEEEEcC
Confidence 466788777665 455555544321 1579999998 6777777766666544 567777666
Q ss_pred hhhhhhc---C----CCCCcEEEEEEeCCCCC
Q 041272 161 HSRMEEI---V----PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 161 ~~~l~~~---~----~~~~~~d~ii~~~~~lp 185 (267)
..+.... . .....+|+++.|.+...
T Consensus 86 v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~ 117 (280)
T 3pgx_A 86 VRDDAALRELVADGMEQFGRLDVVVANAGVLS 117 (280)
T ss_dssp TTCHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 6543321 1 11126899999987754
No 472
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=88.65 E-value=1.6 Score=37.06 Aligned_cols=84 Identities=13% Similarity=0.141 Sum_probs=51.1
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCC------------hHHHHHHHHHHhhccccccccceEEEecCh
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQ------------SEALKSTSSLLDKTTSKAEKGLVKLFNMCH 161 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s------------~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~ 161 (267)
.+++||=-|++. .++..+++.+-. -+.+|+.+|.+ ++.++...+.+...+ .++.++..|.
T Consensus 45 ~gk~~lVTGas~-GIG~aia~~la~--~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv 116 (317)
T 3oec_A 45 QGKVAFITGAAR-GQGRTHAVRLAQ--DGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG-----RRIIARQADV 116 (317)
T ss_dssp TTCEEEESSCSS-HHHHHHHHHHHH--TTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT-----CCEEEEECCT
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHH--CCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC-----CeEEEEECCC
Confidence 466788777655 455555544321 15799999986 566666555555533 5677777666
Q ss_pred hhhhhc---C----CCCCcEEEEEEeCCCCC
Q 041272 162 SRMEEI---V----PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 162 ~~l~~~---~----~~~~~~d~ii~~~~~lp 185 (267)
.+.... . .....+|+++.|.+...
T Consensus 117 ~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~ 147 (317)
T 3oec_A 117 RDLASLQAVVDEALAEFGHIDILVSNVGISN 147 (317)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 544321 1 11136899999987644
No 473
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=88.61 E-value=1.3 Score=36.60 Aligned_cols=84 Identities=13% Similarity=0.007 Sum_probs=52.5
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+++||=.|+ +|.++..+++.+-. -+.+|+.+|.+++.++.+.+.+...+ .++.++..|..+.... .
T Consensus 20 ~~k~vlVTGa-s~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~ 91 (273)
T 1ae1_A 20 KGTTALVTGG-SKGIGYAIVEELAG--LGARVYTCSRNEKELDECLEIWREKG-----LNVEGSVCDLLSRTERDKLMQT 91 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECC-cchHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcC-----CceEEEECCCCCHHHHHHHHHH
Confidence 3567888775 45566666654422 15799999999988776666555433 4566666665543221 1
Q ss_pred --CCC-CcEEEEEEeCCCCC
Q 041272 169 --PKS-TAVRLVAFNLGYLP 185 (267)
Q Consensus 169 --~~~-~~~d~ii~~~~~lp 185 (267)
... ..+|+++.+.+...
T Consensus 92 ~~~~~~g~id~lv~nAg~~~ 111 (273)
T 1ae1_A 92 VAHVFDGKLNILVNNAGVVI 111 (273)
T ss_dssp HHHHTTSCCCEEEECCCCCC
T ss_pred HHHHcCCCCcEEEECCCCCC
Confidence 001 36899999987643
No 474
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=88.40 E-value=1.3 Score=36.07 Aligned_cols=83 Identities=12% Similarity=0.053 Sum_probs=51.0
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh---cC---
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE---IV--- 168 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~---~~--- 168 (267)
+++||=.|. +|.++..+++.+-. -+.+|+.++.+++.++...+.+...+ .++.++..|..+... ..
T Consensus 2 ~k~vlVTGa-s~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~ 73 (256)
T 1geg_A 2 KKVALVTGA-GQGIGKAIALRLVK--DGFAVAIADYNDATAKAVASEINQAG-----GHAVAVKVDVSDRDQVFAAVEQA 73 (256)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECC-CChHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcC-----CcEEEEEecCCCHHHHHHHHHHH
Confidence 356777775 45566666654422 15799999999987776666555433 456666666554332 11
Q ss_pred -CCCCcEEEEEEeCCCCC
Q 041272 169 -PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 169 -~~~~~~d~ii~~~~~lp 185 (267)
.....+|+++.+.+..+
T Consensus 74 ~~~~g~id~lv~nAg~~~ 91 (256)
T 1geg_A 74 RKTLGGFDVIVNNAGVAP 91 (256)
T ss_dssp HHHTTCCCEEEECCCCCC
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 11126899999987643
No 475
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=88.36 E-value=0.55 Score=38.59 Aligned_cols=84 Identities=11% Similarity=0.086 Sum_probs=47.3
Q ss_pred CCCEEEEecCC-CChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh---cCC
Q 041272 94 KGDTVVDATCG-NGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE---IVP 169 (267)
Q Consensus 94 ~~~~VLDlGcG-~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~---~~~ 169 (267)
.+++||=.|++ +|.++..+++.+-. -+.+|+.++.+++.-+..++ +... ...+.++..|..+... ...
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~-l~~~-----~~~~~~~~~D~~~~~~v~~~~~ 78 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKE--AGAEVALSYQAERLRPEAEK-LAEA-----LGGALLFRADVTQDEELDALFA 78 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHH--HTCEEEEEESCGGGHHHHHH-HHHH-----TTCCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHH-HHHh-----cCCcEEEECCCCCHHHHHHHHH
Confidence 35688988986 25666666554321 04789999998862222222 2221 1235566655554322 111
Q ss_pred ----CCCcEEEEEEeCCCCC
Q 041272 170 ----KSTAVRLVAFNLGYLP 185 (267)
Q Consensus 170 ----~~~~~d~ii~~~~~lp 185 (267)
....+|+++.+.+..+
T Consensus 79 ~~~~~~g~iD~lv~~Ag~~~ 98 (261)
T 2wyu_A 79 GVKEAFGGLDYLVHAIAFAP 98 (261)
T ss_dssp HHHHHHSSEEEEEECCCCCC
T ss_pred HHHHHcCCCCEEEECCCCCC
Confidence 1126899999987643
No 476
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=88.19 E-value=0.77 Score=32.19 Aligned_cols=69 Identities=13% Similarity=-0.035 Sum_probs=41.7
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCC-cEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChh---hhhhcCCC
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSA-GCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHS---RMEEIVPK 170 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~---~l~~~~~~ 170 (267)
+++|+=+|+ |.++..+++.+.. .+ .+|+++|.+++.++..+. ..+.++..+.. .+.+.+.
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~--~g~~~v~~~~r~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~- 68 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKT--SSNYSVTVADHDLAALAVLNR-----------MGVATKQVDAKDEAGLAKALG- 68 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHH--CSSEEEEEEESCHHHHHHHHT-----------TTCEEEECCTTCHHHHHHHTT-
T ss_pred cCeEEEECC--CHHHHHHHHHHHh--CCCceEEEEeCCHHHHHHHHh-----------CCCcEEEecCCCHHHHHHHHc-
Confidence 468999998 6666666654422 13 689999999987766541 12333333333 3333332
Q ss_pred CCcEEEEEEeC
Q 041272 171 STAVRLVAFNL 181 (267)
Q Consensus 171 ~~~~d~ii~~~ 181 (267)
.+|+++...
T Consensus 69 --~~d~vi~~~ 77 (118)
T 3ic5_A 69 --GFDAVISAA 77 (118)
T ss_dssp --TCSEEEECS
T ss_pred --CCCEEEECC
Confidence 478888875
No 477
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=88.19 E-value=1.5 Score=36.18 Aligned_cols=118 Identities=9% Similarity=0.102 Sum_probs=64.0
Q ss_pred CCCEEEEecCC-CChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh---cC-
Q 041272 94 KGDTVVDATCG-NGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE---IV- 168 (267)
Q Consensus 94 ~~~~VLDlGcG-~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~---~~- 168 (267)
.+++||=.|.+ +|.++..+++.+-. -+.+|+.++.+++ .+...+.+.... .++.++..|..+... ..
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~--~G~~V~~~~r~~~-~~~~~~~l~~~~-----~~~~~~~~D~~~~~~v~~~~~ 76 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFN--QGATLAFTYLNES-LEKRVRPIAQEL-----NSPYVYELDVSKEEHFKSLYN 76 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHT--TTCEEEEEESSTT-THHHHHHHHHHT-----TCCCEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH--CCCEEEEEeCCHH-HHHHHHHHHHhc-----CCcEEEEcCCCCHHHHHHHHH
Confidence 35688888876 36677777765533 1579999999886 222222232211 235556555554322 11
Q ss_pred ---CCCCcEEEEEEeCCCCCCC--CCce-eechh-----------hHHHHHHHHHhcccCCcEEEEEE
Q 041272 169 ---PKSTAVRLVAFNLGYLPGG--DKSV-ITTSE-----------TTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 169 ---~~~~~~d~ii~~~~~lp~~--d~~~-~~~~~-----------~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.....+|+++.+.+..... ...+ ....+ ....+.+.+.+.++++|.++.+.
T Consensus 77 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 144 (275)
T 2pd4_A 77 SVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLS 144 (275)
T ss_dssp HHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEe
Confidence 1123689999998765320 0011 11111 22344566667776678776654
No 478
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=88.19 E-value=1.8 Score=35.87 Aligned_cols=84 Identities=13% Similarity=0.031 Sum_probs=52.4
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh---cC--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE---IV-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~---~~-- 168 (267)
.+++||=.|++ |.++..+++.+-. .+.+|+.++.+++.++...+.++..+ .++.++..|..+... ..
T Consensus 21 ~~k~vlVTGas-~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dv~~~~~v~~~~~~ 92 (277)
T 2rhc_B 21 DSEVALVTGAT-SGIGLEIARRLGK--EGLRVFVCARGEEGLRTTLKELREAG-----VEADGRTCDVRSVPEIEALVAA 92 (277)
T ss_dssp TSCEEEEETCS-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcC-----CceEEEECCCCCHHHHHHHHHH
Confidence 35678888865 5566666654422 15799999999988776666665433 456666666554322 11
Q ss_pred --CCCCcEEEEEEeCCCCC
Q 041272 169 --PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~lp 185 (267)
.....+|+++.+.+...
T Consensus 93 ~~~~~g~iD~lv~~Ag~~~ 111 (277)
T 2rhc_B 93 VVERYGPVDVLVNNAGRPG 111 (277)
T ss_dssp HHHHTCSCSEEEECCCCCC
T ss_pred HHHHhCCCCEEEECCCCCC
Confidence 11125899999987643
No 479
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=88.00 E-value=2.8 Score=37.23 Aligned_cols=99 Identities=15% Similarity=0.119 Sum_probs=57.1
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC-CCc
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK-STA 173 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~-~~~ 173 (267)
+++|+=+|+| .++..+++.+.. -+..|+.||.+++.++.+++. .+.++.+|..+...+... -..
T Consensus 4 ~~~viIiG~G--r~G~~va~~L~~--~g~~vvvId~d~~~v~~~~~~-----------g~~vi~GDat~~~~L~~agi~~ 68 (413)
T 3l9w_A 4 GMRVIIAGFG--RFGQITGRLLLS--SGVKMVVLDHDPDHIETLRKF-----------GMKVFYGDATRMDLLESAGAAK 68 (413)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHH--TTCCEEEEECCHHHHHHHHHT-----------TCCCEESCTTCHHHHHHTTTTT
T ss_pred CCeEEEECCC--HHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHhC-----------CCeEEEcCCCCHHHHHhcCCCc
Confidence 4578888874 566666654432 146899999999999887641 234566665543322111 124
Q ss_pred EEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 174 VRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 174 ~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
.|+++...+. +.....+-...+.+.|...++.-..
T Consensus 69 A~~viv~~~~------------~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 69 AEVLINAIDD------------PQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp CSEEEECCSS------------HHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred cCEEEECCCC------------hHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 6666666311 2223344455666788877765443
No 480
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=87.97 E-value=2.6 Score=34.80 Aligned_cols=85 Identities=13% Similarity=0.167 Sum_probs=52.3
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeC-------------ChHHHHHHHHHHhhccccccccceEEEecC
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDI-------------QSEALKSTSSLLDKTTSKAEKGLVKLFNMC 160 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~-------------s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~ 160 (267)
.++++|=-|++.| ++..+++.+-. -+.+|+.+|. +++.++...+.+...+ .++.++..|
T Consensus 10 ~~k~~lVTGas~G-IG~a~a~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~D 81 (277)
T 3tsc_A 10 EGRVAFITGAARG-QGRAHAVRMAA--EGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN-----RRIVAAVVD 81 (277)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHH--TTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT-----CCEEEEECC
T ss_pred CCCEEEEECCccH-HHHHHHHHHHH--cCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-----CeEEEEECC
Confidence 3668888786654 55555543321 1579999998 6666766666655533 567777666
Q ss_pred hhhhhhc---CC----CCCcEEEEEEeCCCCCC
Q 041272 161 HSRMEEI---VP----KSTAVRLVAFNLGYLPG 186 (267)
Q Consensus 161 ~~~l~~~---~~----~~~~~d~ii~~~~~lp~ 186 (267)
..+.... .. ....+|+++.|.+....
T Consensus 82 ~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~ 114 (277)
T 3tsc_A 82 TRDFDRLRKVVDDGVAALGRLDIIVANAGVAAP 114 (277)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 6554321 11 11358999999887544
No 481
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=87.97 E-value=2.6 Score=34.32 Aligned_cols=83 Identities=13% Similarity=0.021 Sum_probs=53.5
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C---
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V--- 168 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~--- 168 (267)
+++||=.|.+ |.++..+++.+-. -+.+|+.+|.+++.++.+.+.++..+ .++.++..|..+.... .
T Consensus 6 ~k~vlVTGas-~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~ 77 (257)
T 3imf_A 6 EKVVIITGGS-SGMGKGMATRFAK--EGARVVITGRTKEKLEEAKLEIEQFP-----GQILTVQMDVRNTDDIQKMIEQI 77 (257)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHCCST-----TCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcC-----CcEEEEEccCCCHHHHHHHHHHH
Confidence 5677777755 5556555554322 15799999999998888877766543 5677777666554321 1
Q ss_pred -CCCCcEEEEEEeCCCCC
Q 041272 169 -PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 169 -~~~~~~d~ii~~~~~lp 185 (267)
.....+|+++.|.+...
T Consensus 78 ~~~~g~id~lv~nAg~~~ 95 (257)
T 3imf_A 78 DEKFGRIDILINNAAGNF 95 (257)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 11125899999987543
No 482
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=87.90 E-value=1.7 Score=35.09 Aligned_cols=82 Identities=15% Similarity=0.112 Sum_probs=49.2
Q ss_pred CCCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhh---hcCC
Q 041272 93 RKGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRME---EIVP 169 (267)
Q Consensus 93 ~~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~---~~~~ 169 (267)
.++.+||=.|++ |.++..+++.+-. .+.+|+.++.+++.++...+.+. .++.++..|..+.. ....
T Consensus 12 ~~~k~vlVTGas-~gIG~~~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~ 80 (249)
T 3f9i_A 12 LTGKTSLITGAS-SGIGSAIARLLHK--LGSKVIISGSNEEKLKSLGNALK--------DNYTIEVCNLANKEECSNLIS 80 (249)
T ss_dssp CTTCEEEETTTT-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHC--------SSEEEEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEECCC-ChHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHHhc--------cCccEEEcCCCCHHHHHHHHH
Confidence 356788877765 4555555554322 15799999999987776655432 35566655554432 2222
Q ss_pred CCCcEEEEEEeCCCCC
Q 041272 170 KSTAVRLVAFNLGYLP 185 (267)
Q Consensus 170 ~~~~~d~ii~~~~~lp 185 (267)
....+|+++.+.+...
T Consensus 81 ~~~~id~li~~Ag~~~ 96 (249)
T 3f9i_A 81 KTSNLDILVCNAGITS 96 (249)
T ss_dssp TCSCCSEEEECCC---
T ss_pred hcCCCCEEEECCCCCC
Confidence 2246899999987643
No 483
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=87.56 E-value=1.5 Score=36.00 Aligned_cols=118 Identities=9% Similarity=0.055 Sum_probs=61.2
Q ss_pred CCCEEEEecCCC-ChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh------
Q 041272 94 KGDTVVDATCGN-GYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE------ 166 (267)
Q Consensus 94 ~~~~VLDlGcG~-G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~------ 166 (267)
.+++||=.|.++ |.++..+++.+-. -+.+|+.+|.++...+.. +.+.... ....++..|..+...
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~-~~l~~~~-----~~~~~~~~D~~~~~~v~~~~~ 79 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHR--EGAELAFTYQNDKLKGRV-EEFAAQL-----GSDIVLQCDVAEDASIDTMFA 79 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHH--TTCEEEEEESSTTTHHHH-HHHHHHT-----TCCCEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHH--CCCEEEEEcCcHHHHHHH-HHHHHhc-----CCcEEEEccCCCHHHHHHHHH
Confidence 356888888762 6666666665422 157899999987322222 2222211 123445555443321
Q ss_pred -cCCCCCcEEEEEEeCCCCCCC--CCcee--ech-----------hhHHHHHHHHHhcccCCcEEEEEE
Q 041272 167 -IVPKSTAVRLVAFNLGYLPGG--DKSVI--TTS-----------ETTKMALEAAERILIPGGLISMVV 219 (267)
Q Consensus 167 -~~~~~~~~d~ii~~~~~lp~~--d~~~~--~~~-----------~~~~~~l~~~~~~LkpgG~l~i~~ 219 (267)
.......+|+++.+.+..+.. ...+. ... .....+.+.+.+.++++|.++.+.
T Consensus 80 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (265)
T 1qsg_A 80 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLS 148 (265)
T ss_dssp HHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEc
Confidence 112224699999998764320 00010 111 122344556667776678776654
No 484
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=87.51 E-value=1.8 Score=36.03 Aligned_cols=83 Identities=13% Similarity=0.009 Sum_probs=53.7
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+.+||=.|++. .++..+++.+-. .+.+|+.+|.+++.++...+.+...+ .++.++..|..+.... .
T Consensus 27 ~~k~~lVTGas~-GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 98 (283)
T 3v8b_A 27 PSPVALITGAGS-GIGRATALALAA--DGVTVGALGRTRTEVEEVADEIVGAG-----GQAIALEADVSDELQMRNAVRD 98 (283)
T ss_dssp CCCEEEEESCSS-HHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHTTTT-----CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcC-----CcEEEEEccCCCHHHHHHHHHH
Confidence 466788777654 455555554322 15799999999988887777766543 5677777666554221 1
Q ss_pred --CCCCcEEEEEEeCCCC
Q 041272 169 --PKSTAVRLVAFNLGYL 184 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~l 184 (267)
.....+|+++.|.+..
T Consensus 99 ~~~~~g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 99 LVLKFGHLDIVVANAGIN 116 (283)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHHhCCCCEEEECCCCC
Confidence 1113689999998764
No 485
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=87.48 E-value=1.1 Score=37.62 Aligned_cols=84 Identities=11% Similarity=0.054 Sum_probs=52.3
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhh---cC--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE---IV-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~---~~-- 168 (267)
.+++||=.|+ +|.++..+++.+-. .+.+|+.+|.+++.++...+.++..+ .++.++..|..+... ..
T Consensus 33 ~~k~vlVTGa-s~gIG~aia~~L~~--~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 104 (291)
T 3cxt_A 33 KGKIALVTGA-SYGIGFAIASAYAK--AGATIVFNDINQELVDRGMAAYKAAG-----INAHGYVCDVTDEDGIQAMVAQ 104 (291)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHHHTT-----CCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcC-----CeEEEEEecCCCHHHHHHHHHH
Confidence 3567887775 45666666654422 15799999999987776666555433 456666666554322 11
Q ss_pred --CCCCcEEEEEEeCCCCC
Q 041272 169 --PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~lp 185 (267)
.....+|+++.+.+...
T Consensus 105 ~~~~~g~iD~lvnnAg~~~ 123 (291)
T 3cxt_A 105 IESEVGIIDILVNNAGIIR 123 (291)
T ss_dssp HHHHTCCCCEEEECCCCCC
T ss_pred HHHHcCCCcEEEECCCcCC
Confidence 11135899999987643
No 486
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=87.44 E-value=2 Score=35.37 Aligned_cols=84 Identities=15% Similarity=0.043 Sum_probs=50.9
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHH-hhccccccccceEEEecChhhhhh---cC-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLL-DKTTSKAEKGLVKLFNMCHSRMEE---IV- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~-~~~~~~~~~~~v~~~~~~~~~l~~---~~- 168 (267)
.+++||=.|.+ |.++..+++.+-. .+.+|+.++.+++.++...+.+ +..+ .++.++..|..+... ..
T Consensus 20 ~~k~~lVTGas-~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dl~~~~~v~~~~~ 91 (267)
T 1vl8_A 20 RGRVALVTGGS-RGLGFGIAQGLAE--AGCSVVVASRNLEEASEAAQKLTEKYG-----VETMAFRCDVSNYEEVKKLLE 91 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHHHC-----CCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHHhcC-----CeEEEEEcCCCCHHHHHHHHH
Confidence 35678877754 5566666654422 1579999999988777665555 2222 356666666554322 11
Q ss_pred ---CCCCcEEEEEEeCCCCC
Q 041272 169 ---PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 169 ---~~~~~~d~ii~~~~~lp 185 (267)
.....+|+++.+.+...
T Consensus 92 ~~~~~~g~iD~lvnnAg~~~ 111 (267)
T 1vl8_A 92 AVKEKFGKLDTVVNAAGINR 111 (267)
T ss_dssp HHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHcCCCCEEEECCCcCC
Confidence 01125899999987644
No 487
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=87.41 E-value=1.6 Score=35.63 Aligned_cols=83 Identities=14% Similarity=0.046 Sum_probs=51.1
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhc-cccccccceEEEecChhhhhhc---CC-
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKT-TSKAEKGLVKLFNMCHSRMEEI---VP- 169 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~-~~~~~~~~v~~~~~~~~~l~~~---~~- 169 (267)
+++||=.|++ |.++..+++.+-. .+.+|+.++.+++.++.+.+.+... + .++.++..|..+.... ..
T Consensus 7 ~k~vlVTGas-~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~D~~~~~~~~~~~~~ 78 (263)
T 3ai3_A 7 GKVAVITGSS-SGIGLAIAEGFAK--EGAHIVLVARQVDRLHEAARSLKEKFG-----VRVLEVAVDVATPEGVDAVVES 78 (263)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHHHC-----CCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCC-chHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHHHHHhcC-----CceEEEEcCCCCHHHHHHHHHH
Confidence 5678877755 5566666654422 1579999999988777666555442 2 3566776665543221 10
Q ss_pred ---CCCcEEEEEEeCCCCC
Q 041272 170 ---KSTAVRLVAFNLGYLP 185 (267)
Q Consensus 170 ---~~~~~d~ii~~~~~lp 185 (267)
....+|+++.+.+...
T Consensus 79 ~~~~~g~id~lv~~Ag~~~ 97 (263)
T 3ai3_A 79 VRSSFGGADILVNNAGTGS 97 (263)
T ss_dssp HHHHHSSCSEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 1125899999987643
No 488
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=87.28 E-value=3.3 Score=34.14 Aligned_cols=85 Identities=12% Similarity=-0.001 Sum_probs=55.1
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+++||=-|++ |.++..+++.+-. -+.+|+.+|.+++.++...+.++..+ .++.++..|..+.... .
T Consensus 25 ~gk~~lVTGas-~gIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 96 (271)
T 4ibo_A 25 GGRTALVTGSS-RGLGRAMAEGLAV--AGARILINGTDPSRVAQTVQEFRNVG-----HDAEAVAFDVTSESEIIEAFAR 96 (271)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHH--TTCEEEECCSCHHHHHHHHHHHHHTT-----CCEEECCCCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcC-----CceEEEEcCCCCHHHHHHHHHH
Confidence 46678877754 5566665554422 15799999999998888777776644 4677776666554321 1
Q ss_pred --CCCCcEEEEEEeCCCCCC
Q 041272 169 --PKSTAVRLVAFNLGYLPG 186 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~lp~ 186 (267)
.....+|+++.|.+....
T Consensus 97 ~~~~~g~iD~lv~nAg~~~~ 116 (271)
T 4ibo_A 97 LDEQGIDVDILVNNAGIQFR 116 (271)
T ss_dssp HHHHTCCCCEEEECCCCCCC
T ss_pred HHHHCCCCCEEEECCCCCCC
Confidence 112368999999876443
No 489
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=87.25 E-value=1.6 Score=35.89 Aligned_cols=85 Identities=8% Similarity=-0.024 Sum_probs=53.7
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+++||=-|++. .++..+++.+-. -+.+|+.+|.+++.++.+.+.+.... ..++.++..|..+.... .
T Consensus 19 ~~k~vlVTGas~-gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dv~~~~~v~~~~~~ 91 (266)
T 4egf_A 19 DGKRALITGATK-GIGADIARAFAA--AGARLVLSGRDVSELDAARRALGEQF----GTDVHTVAIDLAEPDAPAELARR 91 (266)
T ss_dssp TTCEEEETTTTS-HHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHHH----CCCEEEEECCTTSTTHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHH
Confidence 356788777654 455555554322 15799999999998887777665421 25677777666554321 1
Q ss_pred --CCCCcEEEEEEeCCCCC
Q 041272 169 --PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~lp 185 (267)
.....+|+++.|.+...
T Consensus 92 ~~~~~g~id~lv~nAg~~~ 110 (266)
T 4egf_A 92 AAEAFGGLDVLVNNAGISH 110 (266)
T ss_dssp HHHHHTSCSEEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCcCC
Confidence 11125899999987644
No 490
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=87.24 E-value=1.8 Score=38.19 Aligned_cols=48 Identities=15% Similarity=0.085 Sum_probs=35.5
Q ss_pred CEEEEecCCCChHHHHHHHhcCCCCC----CcEEEEEeCChHHHHHHHHHHhh
Q 041272 96 DTVVDATCGNGYDTLMMLKMVADESS----AGCVYGLDIQSEALKSTSSLLDK 144 (267)
Q Consensus 96 ~~VLDlGcG~G~~~~~la~~~~~~~p----~~~v~giD~s~~~i~~a~~~~~~ 144 (267)
-.|+|+|.|+|.++.-+.+.+.. .| ..+++.||+|+...+.=++++..
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~-~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRV-LPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTT-SHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred cEEEEECCCcchHHHHHHHHHHh-CCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 47999999999999888765421 11 35899999999887755555543
No 491
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=87.19 E-value=1.6 Score=36.12 Aligned_cols=86 Identities=14% Similarity=0.027 Sum_probs=52.3
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C---
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V--- 168 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~--- 168 (267)
+++||=.|+ +|.++..+++.+-. .+.+|+.+|.+++.++...+.+...+. ...++.++..|..+.... .
T Consensus 6 ~k~vlVTGa-s~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (280)
T 1xkq_A 6 NKTVIITGS-SNGIGRTTAILFAQ--EGANVTITGRSSERLEETRQIILKSGV--SEKQVNSVVADVTTEDGQDQIINST 80 (280)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTTTC--CGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECC-CChHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHHcCC--CCcceEEEEecCCCHHHHHHHHHHH
Confidence 567777775 45566666654422 157999999999887776666554330 011677777666554321 1
Q ss_pred -CCCCcEEEEEEeCCCCC
Q 041272 169 -PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 169 -~~~~~~d~ii~~~~~lp 185 (267)
.....+|+++.+.+...
T Consensus 81 ~~~~g~iD~lv~nAg~~~ 98 (280)
T 1xkq_A 81 LKQFGKIDVLVNNAGAAI 98 (280)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHhcCCCCEEEECCCCCC
Confidence 11125899999987643
No 492
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=87.18 E-value=3.3 Score=34.31 Aligned_cols=84 Identities=11% Similarity=-0.047 Sum_probs=49.6
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCCh-HHHHHHHHHHh-hccccccccceEEEecChhh----hhh-
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQS-EALKSTSSLLD-KTTSKAEKGLVKLFNMCHSR----MEE- 166 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~-~~i~~a~~~~~-~~~~~~~~~~v~~~~~~~~~----l~~- 166 (267)
.+++||=.|++ |.++..+++.+-. -+.+|+.++.++ +.++...+.+. ..+ .++.++..|..+ ...
T Consensus 22 ~~k~~lVTGas-~gIG~aia~~L~~--~G~~V~~~~r~~~~~~~~~~~~l~~~~~-----~~~~~~~~Dv~~~~~~~~~v 93 (288)
T 2x9g_A 22 EAPAAVVTGAA-KRIGRAIAVKLHQ--TGYRVVIHYHNSAEAAVSLADELNKERS-----NTAVVCQADLTNSNVLPASC 93 (288)
T ss_dssp CCCEEEETTCS-SHHHHHHHHHHHH--HTCEEEEEESSCHHHHHHHHHHHHHHST-----TCEEEEECCCSCSTTHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH--CCCeEEEEeCCchHHHHHHHHHHHhhcC-----CceEEEEeecCCccCCHHHH
Confidence 35678777755 5555555544321 157999999998 66666555554 222 456676666555 221
Q ss_pred --cC----CCCCcEEEEEEeCCCCC
Q 041272 167 --IV----PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 167 --~~----~~~~~~d~ii~~~~~lp 185 (267)
.. .....+|+++.+.+...
T Consensus 94 ~~~~~~~~~~~g~iD~lvnnAG~~~ 118 (288)
T 2x9g_A 94 EEIINSCFRAFGRCDVLVNNASAFY 118 (288)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCC
Confidence 11 01125899999987643
No 493
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=87.12 E-value=0.97 Score=36.84 Aligned_cols=83 Identities=14% Similarity=-0.011 Sum_probs=50.7
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeC-ChHHHHHHHHHHhhccccccccceEEEecChhhhhh---cCC-
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDI-QSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEE---IVP- 169 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~-s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~---~~~- 169 (267)
+++||=.|+ +|.++..+++.+-. .+.+|+.++. +++..+...+.+...+ .++.++..|..+... ...
T Consensus 7 ~k~vlITGa-sggiG~~~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~l~~~~-----~~~~~~~~D~~~~~~~~~~~~~ 78 (261)
T 1gee_A 7 GKVVVITGS-STGLGKSMAIRFAT--EKAKVVVNYRSKEDEANSVLEEIKKVG-----GEAIAVKGDVTVESDVINLVQS 78 (261)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHH--TTCEEEEEESSCHHHHHHHHHHHHHTT-----CEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCC-CChHHHHHHHHHHH--CCCEEEEEcCCChHHHHHHHHHHHhcC-----CceEEEECCCCCHHHHHHHHHH
Confidence 567887774 56667666664422 1578999999 7776666555554433 456667666554322 111
Q ss_pred ---CCCcEEEEEEeCCCCC
Q 041272 170 ---KSTAVRLVAFNLGYLP 185 (267)
Q Consensus 170 ---~~~~~d~ii~~~~~lp 185 (267)
....+|+++.+.+...
T Consensus 79 ~~~~~g~id~li~~Ag~~~ 97 (261)
T 1gee_A 79 AIKEFGKLDVMINNAGLEN 97 (261)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 1125899999987643
No 494
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=87.05 E-value=1.5 Score=36.40 Aligned_cols=81 Identities=20% Similarity=0.204 Sum_probs=49.1
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+++||=.|++.| ++..+++.+-. .+.+|+.+|.+++.++.+.+.+ + .++.++..|..+.... .
T Consensus 28 ~gk~vlVTGas~g-IG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~---~-----~~~~~~~~Dv~d~~~v~~~~~~ 96 (277)
T 3gvc_A 28 AGKVAIVTGAGAG-IGLAVARRLAD--EGCHVLCADIDGDAADAAATKI---G-----CGAAACRVDVSDEQQIIAMVDA 96 (277)
T ss_dssp TTCEEEETTTTST-HHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHH---C-----SSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHc---C-----CcceEEEecCCCHHHHHHHHHH
Confidence 3668888886655 44444443321 1579999999988776665543 2 3566666665544321 1
Q ss_pred --CCCCcEEEEEEeCCCCC
Q 041272 169 --PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~lp 185 (267)
.....+|+++.+.+...
T Consensus 97 ~~~~~g~iD~lvnnAg~~~ 115 (277)
T 3gvc_A 97 CVAAFGGVDKLVANAGVVH 115 (277)
T ss_dssp HHHHHSSCCEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 11125899999987754
No 495
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=86.94 E-value=1.3 Score=36.87 Aligned_cols=83 Identities=12% Similarity=-0.024 Sum_probs=52.9
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+++||=.|++. .++..+++.+-. .+.+|+.+|.+++.++...+.+...+ .++.++..|..+.... .
T Consensus 7 ~gk~vlVTGas~-GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~ 78 (280)
T 3tox_A 7 EGKIAIVTGASS-GIGRAAALLFAR--EGAKVVVTARNGNALAELTDEIAGGG-----GEAAALAGDVGDEALHEALVEL 78 (280)
T ss_dssp TTCEEEESSTTS-HHHHHHHHHHHH--TTCEEEECCSCHHHHHHHHHHHTTTT-----CCEEECCCCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhcC-----CcEEEEECCCCCHHHHHHHHHH
Confidence 356788777654 455555544321 15799999999998887777665533 5677776666543321 1
Q ss_pred --CCCCcEEEEEEeCCCC
Q 041272 169 --PKSTAVRLVAFNLGYL 184 (267)
Q Consensus 169 --~~~~~~d~ii~~~~~l 184 (267)
.....+|+++.|.+..
T Consensus 79 ~~~~~g~iD~lvnnAg~~ 96 (280)
T 3tox_A 79 AVRRFGGLDTAFNNAGAL 96 (280)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 1112589999998765
No 496
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=86.92 E-value=4.2 Score=36.63 Aligned_cols=97 Identities=15% Similarity=0.210 Sum_probs=55.4
Q ss_pred CEEEEecCCC-C-hHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhc-------cc---ccc-ccceEEEecChh
Q 041272 96 DTVVDATCGN-G-YDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKT-------TS---KAE-KGLVKLFNMCHS 162 (267)
Q Consensus 96 ~~VLDlGcG~-G-~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~-------~~---~~~-~~~v~~~~~~~~ 162 (267)
.+|.=||+|. | .++..+++. +.+|+.+|++++.++.+++..... +. ... .....+ ..
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~------G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~--- 107 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV------GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SS--- 107 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ES---
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cC---
Confidence 4789999876 3 333444433 468999999999988887644321 10 000 001122 21
Q ss_pred hhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEE
Q 041272 163 RMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLIS 216 (267)
Q Consensus 163 ~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 216 (267)
++.. . ...|+|+...+. .......+++++...++||.+++
T Consensus 108 ~~~~-~---~~aDlVIeaVpe----------~~~~k~~v~~~l~~~~~~~~ii~ 147 (463)
T 1zcj_A 108 STKE-L---STVDLVVEAVFE----------DMNLKKKVFAELSALCKPGAFLC 147 (463)
T ss_dssp CGGG-G---TTCSEEEECCCS----------CHHHHHHHHHHHHHHSCTTCEEE
T ss_pred CHHH-H---CCCCEEEEcCCC----------CHHHHHHHHHHHHhhCCCCeEEE
Confidence 2211 1 146888887421 22334678888888888887664
No 497
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=86.92 E-value=1.5 Score=36.38 Aligned_cols=84 Identities=10% Similarity=0.009 Sum_probs=53.7
Q ss_pred CCCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhc---C--
Q 041272 94 KGDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEI---V-- 168 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~---~-- 168 (267)
.+.+||=.|++ |.++..+++.+-. -+.+|+.+|.+++..+.+.+.+...+ .++.++..|..+.... .
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~~~~~~~~ 103 (275)
T 4imr_A 32 RGRTALVTGSS-RGIGAAIAEGLAG--AGAHVILHGVKPGSTAAVQQRIIASG-----GTAQELAGDLSEAGAGTDLIER 103 (275)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHH--TTCEEEEEESSTTTTHHHHHHHHHTT-----CCEEEEECCTTSTTHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHHHHhcC-----CeEEEEEecCCCHHHHHHHHHH
Confidence 46678877755 5556555554422 15799999999988877777766544 5677776666543221 1
Q ss_pred -CCCCcEEEEEEeCCCCC
Q 041272 169 -PKSTAVRLVAFNLGYLP 185 (267)
Q Consensus 169 -~~~~~~d~ii~~~~~lp 185 (267)
.....+|+++.|.+...
T Consensus 104 ~~~~g~iD~lvnnAg~~~ 121 (275)
T 4imr_A 104 AEAIAPVDILVINASAQI 121 (275)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 01136899999987643
No 498
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=86.92 E-value=6.4 Score=33.68 Aligned_cols=113 Identities=10% Similarity=-0.063 Sum_probs=56.5
Q ss_pred CCCEEEEecCCCChHHHHHHH---hcCCCCCCcEEEEEeCChHHHHHHHHHHhhccccccccceEEEecChhhhhhcCCC
Q 041272 94 KGDTVVDATCGNGYDTLMMLK---MVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAEKGLVKLFNMCHSRMEEIVPK 170 (267)
Q Consensus 94 ~~~~VLDlGcG~G~~~~~la~---~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~ 170 (267)
...+|.=+|+|. .+..+|. ..+. ..+++.+|++++.++--...+.... +....++.+..++.+++.
T Consensus 4 ~~~kI~ViGaG~--vG~~~a~~l~~~~~---~~~l~l~D~~~~k~~g~a~DL~~~~-~~~~~~v~i~~~~~~a~~----- 72 (326)
T 3pqe_A 4 HVNKVALIGAGF--VGSSYAFALINQGI---TDELVVIDVNKEKAMGDVMDLNHGK-AFAPQPVKTSYGTYEDCK----- 72 (326)
T ss_dssp SCCEEEEECCSH--HHHHHHHHHHHHTC---CSEEEEECSCHHHHHHHHHHHHHTG-GGSSSCCEEEEECGGGGT-----
T ss_pred CCCEEEEECCCH--HHHHHHHHHHhCCC---CceEEEEecchHHHHHHHHHHHhcc-ccccCCeEEEeCcHHHhC-----
Confidence 356888999754 3333332 2221 1389999999877654322232211 001134454443332221
Q ss_pred CCcEEEEEEeCCCCCCCCCcee----echhhHHHHHHHHHhcccCCcEEEEEEe
Q 041272 171 STAVRLVAFNLGYLPGGDKSVI----TTSETTKMALEAAERILIPGGLISMVVY 220 (267)
Q Consensus 171 ~~~~d~ii~~~~~lp~~d~~~~----~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 220 (267)
..|+++...+..+.+...-. ........+.+.+.+. .|+++++++..
T Consensus 73 --~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvtN 123 (326)
T 3pqe_A 73 --DADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFLVATN 123 (326)
T ss_dssp --TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSS
T ss_pred --CCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcCC
Confidence 36777777654322211100 1112234455555554 79999887665
No 499
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=86.64 E-value=4.1 Score=36.86 Aligned_cols=108 Identities=14% Similarity=0.090 Sum_probs=58.9
Q ss_pred CCCEEEEecCCC-Ch-HHHHHHHhcCCCCCCcEEEEEeCChHHHHHHHHHHhhcccccc---------ccceEEEecChh
Q 041272 94 KGDTVVDATCGN-GY-DTLMMLKMVADESSAGCVYGLDIQSEALKSTSSLLDKTTSKAE---------KGLVKLFNMCHS 162 (267)
Q Consensus 94 ~~~~VLDlGcG~-G~-~~~~la~~~~~~~p~~~v~giD~s~~~i~~a~~~~~~~~~~~~---------~~~v~~~~~~~~ 162 (267)
..++|.=||+|. |. ++..|++. +.+|+++|++++.++..++.-........ ..++.+.. +.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~------G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~tt-d~- 78 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI------GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFST-DI- 78 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEEC-CH-
T ss_pred CCceEEEECcCHHHHHHHHHHHhC------CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEEC-CH-
Confidence 346888888875 32 33444443 45899999999988887764210000000 12344332 11
Q ss_pred hhhhcCCCCCcEEEEEEeCCCCCCCCCceeechhhHHHHHHHHHhcccCCcEEE
Q 041272 163 RMEEIVPKSTAVRLVAFNLGYLPGGDKSVITTSETTKMALEAAERILIPGGLIS 216 (267)
Q Consensus 163 ~l~~~~~~~~~~d~ii~~~~~lp~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 216 (267)
.+.. ...|+++...+.-...+.. .......++++.+.+.|++|.+++
T Consensus 79 --~~a~---~~aDvviiaVptp~~~~~~--~dl~~v~~v~~~i~~~l~~~~iVV 125 (478)
T 2y0c_A 79 --EAAV---AHGDVQFIAVGTPPDEDGS--ADLQYVLAAARNIGRYMTGFKVIV 125 (478)
T ss_dssp --HHHH---HHCSEEEECCCCCBCTTSS--BCCHHHHHHHHHHHHHCCSCEEEE
T ss_pred --HHHh---hcCCEEEEEeCCCcccCCC--ccHHHHHHHHHHHHHhcCCCCEEE
Confidence 1111 1357777775432222221 123455778888889999877653
No 500
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=86.38 E-value=5.5 Score=35.95 Aligned_cols=86 Identities=7% Similarity=0.022 Sum_probs=53.1
Q ss_pred CCEEEEecCCCChHHHHHHHhcCCCCCCcEEEEEeCChH---HHHHHHHHHhhcc----ccccccceEEEecChhhhhhc
Q 041272 95 GDTVVDATCGNGYDTLMMLKMVADESSAGCVYGLDIQSE---ALKSTSSLLDKTT----SKAEKGLVKLFNMCHSRMEEI 167 (267)
Q Consensus 95 ~~~VLDlGcG~G~~~~~la~~~~~~~p~~~v~giD~s~~---~i~~a~~~~~~~~----~~~~~~~v~~~~~~~~~l~~~ 167 (267)
.++||=.| |+|.++..+++.+.. .+.+|++++.++. ..+...+.++... ......++.++.+|..+...+
T Consensus 150 ~~~VLVTG-atG~iG~~l~~~L~~--~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 226 (508)
T 4f6l_B 150 LGNTLLTG-ATGFLGAYLIEALQG--YSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 226 (508)
T ss_dssp CEEEEESC-TTSHHHHHHHHHTBT--TEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSC
T ss_pred CCeEEEEC-CccchHHHHHHHHHh--cCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccC
Confidence 35677666 689999999988744 2578999998876 3333333332210 000135788888777664443
Q ss_pred CCCCCcEEEEEEeCCCC
Q 041272 168 VPKSTAVRLVAFNLGYL 184 (267)
Q Consensus 168 ~~~~~~~d~ii~~~~~l 184 (267)
. ....+|+|+.+.+..
T Consensus 227 ~-~~~~~D~Vih~Aa~~ 242 (508)
T 4f6l_B 227 V-LPENMDTIIHAGART 242 (508)
T ss_dssp C-CSSCCSEEEECCCC-
T ss_pred C-CccCCCEEEECCcee
Confidence 3 334789998886654
Done!