BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041278
(101 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357503357|ref|XP_003621967.1| Heat shock protein [Medicago truncatula]
gi|357503391|ref|XP_003621984.1| Heat shock protein [Medicago truncatula]
gi|355496982|gb|AES78185.1| Heat shock protein [Medicago truncatula]
gi|355496999|gb|AES78202.1| Heat shock protein [Medicago truncatula]
Length = 553
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 29/56 (51%)
Query: 46 ELTAFATKLIAIILAIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
E KL+ +ILA+E A R+W LWIE DS L + PW L +RW N
Sbjct: 337 ESPMLGNKLMGVILAVECAIDRNWNNLWIESDSKLANLAVKSPNIVPWQLKNRWLN 392
>gi|255638517|gb|ACU19567.1| unknown [Glycine max]
Length = 117
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 48 TAFATKLIAIILAIEHASIRDWTMLWIECDSPLTVH-LCNKRLLPPWFLTHRWNN 101
++ K++ +I AI+ A + W LW+ECD L V +CN L+ PW L +RW N
Sbjct: 39 SSLYEKIMGVIHAIQGAGKKGWKNLWLECDFTLVVQVICNHGLV-PWQLRNRWYN 92
>gi|140068359|gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 48 TAFATKLIAIILAIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
+ F + +A ILA+EHA+ W LW+E DS + + + L W L +RW+N
Sbjct: 1061 SVFHAETLAFILALEHAAHHGWRNLWLESDSTSALMIFSNSSLVQWLLRNRWHN 1114
>gi|357450773|ref|XP_003595663.1| hypothetical protein MTR_2g058830 [Medicago truncatula]
gi|355484711|gb|AES65914.1| hypothetical protein MTR_2g058830 [Medicago truncatula]
Length = 179
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 44 IWELTAFATKLIAIILAIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
I E + + ++++AIIL++EH S W +W+E DS + + + L P L +RW+N
Sbjct: 61 IGEASVYHSEVLAIILSMEHTSFHGWRNIWLESDSSSALLIISNSSLVPIMLRNRWHN 118
>gi|357448825|ref|XP_003594688.1| hypothetical protein MTR_2g033480 [Medicago truncatula]
gi|355483736|gb|AES64939.1| hypothetical protein MTR_2g033480 [Medicago truncatula]
Length = 180
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 52 TKLIAIILAIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
T+L + AI AS + W LW+E DS L V +L PW + +RWNN
Sbjct: 127 TELCGAMRAIGVASQKQWNFLWLETDSMLVVQAFKSSILVPWQVRNRWNN 176
>gi|357470735|ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
gi|355506707|gb|AES87849.1| GDSL esterase/lipase [Medicago truncatula]
Length = 1004
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 48 TAFATKLIAIILAIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
+A+ +L AI+ +E A R+W +WIE DS L V K + P L +RW N
Sbjct: 271 SAYQPELAAIMRVVEIAYQRNWRNIWIESDSALVVMAFKKMSMIPCRLRNRWIN 324
>gi|357439879|ref|XP_003590217.1| hypothetical protein MTR_1g050070 [Medicago truncatula]
gi|355479265|gb|AES60468.1| hypothetical protein MTR_1g050070 [Medicago truncatula]
Length = 118
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 48 TAFATKLIAIILAIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
+ F +K++ IILA+E+A+ W +W+E DS + + L P L +RW N
Sbjct: 34 SVFHSKVLTIILAMEYAASHGWRNIWLESDSTSALMIFKNSYLVPILLRNRWYN 87
>gi|358344866|ref|XP_003636507.1| 70 kDa peptidyl-prolyl isomerase [Medicago truncatula]
gi|355502442|gb|AES83645.1| 70 kDa peptidyl-prolyl isomerase [Medicago truncatula]
Length = 653
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 48 TAFATKLIAIILAIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
+A +L A + A+E A+ + W+ W+E +S L + L PW L +RW N
Sbjct: 117 SALMAELSAAMFALEMANSKGWSCFWLETNSKLVELAFSNTSLVPWSLRNRWLN 170
>gi|358344864|ref|XP_003636506.1| 70 kDa peptidyl-prolyl isomerase [Medicago truncatula]
gi|355502441|gb|AES83644.1| 70 kDa peptidyl-prolyl isomerase [Medicago truncatula]
Length = 750
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 48 TAFATKLIAIILAIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
+A +L A + A+E A+ + W+ W+E +S L + L PW L +RW N
Sbjct: 214 SALMAELSAAMFALEMANSKGWSCFWLETNSKLVELAFSNTSLVPWSLRNRWLN 267
>gi|357472709|ref|XP_003606639.1| hypothetical protein MTR_4g063340 [Medicago truncatula]
gi|355507694|gb|AES88836.1| hypothetical protein MTR_4g063340 [Medicago truncatula]
Length = 117
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 35 MIVKEIFFWIWELTAFATKLIAIILAIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWF 94
+I K+ +I E AF +L + AIE +DW LW+E D + VH+ NK P
Sbjct: 5 LIPKKKTKFINEGNAFQAELCGALRAIEITHQKDWHHLWLELDYAMAVHVLNKNSQVPCN 64
Query: 95 L 95
L
Sbjct: 65 L 65
>gi|357466787|ref|XP_003603678.1| hypothetical protein MTR_3g111040 [Medicago truncatula]
gi|355492726|gb|AES73929.1| hypothetical protein MTR_3g111040 [Medicago truncatula]
Length = 132
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 44 IWELTAFATKLIAIILAIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
+ ++ F +++ +ILA+E+A+ +W+ LW+E DS +K L L +RW+N
Sbjct: 23 VGRVSVFEVEVLGLILAMEYAASNNWSRLWLESDSSSAAQAFHKPSLIHVGLRNRWHN 80
>gi|357457815|ref|XP_003599188.1| F-box protein [Medicago truncatula]
gi|355488236|gb|AES69439.1| F-box protein [Medicago truncatula]
Length = 969
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 48 TAFATKLIAIILAIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
AF +L+ +I +E A + WT LWIE DS LT + PW + +RW N
Sbjct: 708 NAFYVELMGVIFPMECAVEKRWTHLWIESDSKLTNLKVKSPNIVPWQINNRWLN 761
>gi|357490495|ref|XP_003615535.1| hypothetical protein MTR_5g069250 [Medicago truncatula]
gi|355516870|gb|AES98493.1| hypothetical protein MTR_5g069250 [Medicago truncatula]
Length = 109
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 60 AIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
+IE A + W W+E DS L V + PW L +RWNN
Sbjct: 3 SIEFAQSKSWNNFWLETDSMLVVQAFKNSAIVPWQLRNRWNN 44
>gi|357470319|ref|XP_003605444.1| hypothetical protein MTR_4g031460 [Medicago truncatula]
gi|355506499|gb|AES87641.1| hypothetical protein MTR_4g031460 [Medicago truncatula]
Length = 309
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 45 WELTAFATKLIAIILAIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
W + F II AIE A+ W +W+E DS + + + LL P L +RW++
Sbjct: 164 WSILVFG-----IIFAIEFAARNGWRNIWLESDSTSALMIFSNSLLVPIMLRNRWHS 215
>gi|357457937|ref|XP_003599249.1| hypothetical protein MTR_3g030760 [Medicago truncatula]
gi|355488297|gb|AES69500.1| hypothetical protein MTR_3g030760 [Medicago truncatula]
Length = 83
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 42 FWIWELTAFATKLIAIILAIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFL 95
F I A ++ IILA++ AS R+W LWIE DS L + PW L
Sbjct: 29 FNIGIANAVYAEIFGIILAVKFASERNWNNLWIETDSRLATLAIKSSHIVPWQL 82
>gi|357499193|ref|XP_003619885.1| hypothetical protein MTR_6g071310 [Medicago truncatula]
gi|355494900|gb|AES76103.1| hypothetical protein MTR_6g071310 [Medicago truncatula]
Length = 82
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 60 AIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
IE+A W+ LW+ECDS L ++ + L PW + +RW+N
Sbjct: 9 GIENAFY--WSNLWLECDSALVGNVFKNKSLVPWRIRNRWDN 48
>gi|124360982|gb|ABN08954.1| Ribonuclease H [Medicago truncatula]
Length = 175
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 28/58 (48%)
Query: 44 IWELTAFATKLIAIILAIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
I T F +L A I AIE + + +W+E DS L V + PW L RWNN
Sbjct: 47 IGHATCFKAELCAAIFAIEKSIEYNLRDIWLETDSKLVVKAFSSSEHVPWQLRTRWNN 104
>gi|357498653|ref|XP_003619615.1| hypothetical protein MTR_6g060190 [Medicago truncatula]
gi|355494630|gb|AES75833.1| hypothetical protein MTR_6g060190 [Medicago truncatula]
Length = 61
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 60 AIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
AIE A+ WT LW+E DS L V + PW L +RW N
Sbjct: 3 AIELANTYQWTNLWLETDSELVVKAFKNNAIIPWHLLNRWLN 44
>gi|124361183|gb|ABN09155.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 99
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 61 IEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
IE A R ++ LWIE DS L V L PW + +RW+N
Sbjct: 4 IEIAKQRGYSRLWIETDSKLAVLAFKSSNLIPWKIRNRWDN 44
>gi|357481197|ref|XP_003610884.1| hypothetical protein MTR_5g008100 [Medicago truncatula]
gi|355512219|gb|AES93842.1| hypothetical protein MTR_5g008100 [Medicago truncatula]
Length = 173
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 48 TAFATKLIAIILAIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
A ++LI ++AIE A +DW W+E S L + PW L +RW+N
Sbjct: 57 NALCSELIDAMVAIEIAHKKDWRYFWLETYSMLVSLAFKSSKVVPWHLQNRWSN 110
>gi|357486647|ref|XP_003613611.1| hypothetical protein MTR_5g038650 [Medicago truncatula]
gi|355514946|gb|AES96569.1| hypothetical protein MTR_5g038650 [Medicago truncatula]
Length = 130
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 46 ELTAFATKLIAIILAIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
+ + F ++ ILA+E+A+ WT +W+E DS + + + P L +RW+N
Sbjct: 29 QCSVFEAEVSGYILAMEYAAHHGWTNIWLESDSSSALLVFKNLSVVPILLRNRWHN 84
>gi|357451145|ref|XP_003595849.1| hypothetical protein MTR_2g062550 [Medicago truncatula]
gi|355484897|gb|AES66100.1| hypothetical protein MTR_2g062550 [Medicago truncatula]
Length = 315
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 48 TAFATKLIAIILAIEHASIRDWTMLWIECDSPLTV 82
T F +L ++LAIE+A+ +W+ LW+E DS V
Sbjct: 265 TVFEAELTGLMLAIEYAASHNWSRLWVESDSSSAV 299
>gi|357515963|ref|XP_003628270.1| hypothetical protein MTR_8g051570 [Medicago truncatula]
gi|355522292|gb|AET02746.1| hypothetical protein MTR_8g051570 [Medicago truncatula]
Length = 73
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 60 AIEHASIRDWTMLWIECDSPLTVHLCNKRLLPPWFLTHRWNN 101
A+E A+ + W+E DS + V N+ PW L+ RWN+
Sbjct: 3 AMEKAASLNSKDFWLESDSLMMVRAMNENSAVPWSLSERWND 44
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.335 0.142 0.509
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,554,533,029
Number of Sequences: 23463169
Number of extensions: 48698640
Number of successful extensions: 165251
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 165221
Number of HSP's gapped (non-prelim): 31
length of query: 101
length of database: 8,064,228,071
effective HSP length: 70
effective length of query: 31
effective length of database: 6,421,806,241
effective search space: 199075993471
effective search space used: 199075993471
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 69 (31.2 bits)