Query         041279
Match_columns 505
No_of_seqs    186 out of 1907
Neff          11.4
Searched_HMMs 46136
Date          Fri Mar 29 05:34:43 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041279.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041279hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 4.7E-87   1E-91  627.0  46.8  459   28-505    24-488 (489)
  2 PLN03234 cytochrome P450 83B1; 100.0 3.5E-81 7.6E-86  610.4  48.7  471   23-505    21-499 (499)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 3.7E-81 7.9E-86  577.1  41.4  458   25-505    26-499 (499)
  4 PLN02971 tryptophan N-hydroxyl 100.0 4.3E-80 9.3E-85  604.6  45.7  465   27-504    54-533 (543)
  5 PLN02687 flavonoid 3'-monooxyg 100.0 1.9E-79 4.1E-84  598.5  46.4  474   18-504    22-508 (517)
  6 PLN02966 cytochrome P450 83A1  100.0 6.7E-79 1.5E-83  593.1  46.8  474   18-503    17-498 (502)
  7 PLN02183 ferulate 5-hydroxylas 100.0 6.1E-79 1.3E-83  594.8  46.0  461   27-505    33-512 (516)
  8 PLN00110 flavonoid 3',5'-hydro 100.0 3.4E-78 7.3E-83  585.8  47.8  471   18-505    19-497 (504)
  9 PLN03112 cytochrome P450 famil 100.0 9.1E-78   2E-82  588.0  48.4  480   15-505    17-508 (514)
 10 PLN02394 trans-cinnamate 4-mon 100.0 3.2E-77   7E-82  583.1  47.9  469   25-505    25-502 (503)
 11 PTZ00404 cytochrome P450; Prov 100.0 1.4E-76 3.1E-81  575.4  46.8  453   25-504    24-482 (482)
 12 PLN00168 Cytochrome P450; Prov 100.0   7E-76 1.5E-80  573.6  47.3  462   27-504    32-516 (519)
 13 KOG0157 Cytochrome P450 CYP4/C 100.0 2.7E-76 5.8E-81  567.1  34.2  454   28-505    33-496 (497)
 14 PLN02655 ent-kaurene oxidase   100.0 4.7E-75   1E-79  560.7  41.9  456   32-505     1-464 (466)
 15 KOG0159 Cytochrome P450 CYP11/ 100.0 1.3E-75 2.8E-80  526.8  33.9  458   27-505    47-518 (519)
 16 PLN02290 cytokinin trans-hydro 100.0 2.8E-75   6E-80  570.8  38.3  451   27-504    39-514 (516)
 17 PLN03018 homomethionine N-hydr 100.0 1.6E-73 3.4E-78  553.7  47.9  463   28-504    38-523 (534)
 18 PLN02500 cytochrome P450 90B1  100.0 2.4E-74 5.2E-79  560.0  39.8  438   26-503    34-488 (490)
 19 PLN02774 brassinosteroid-6-oxi 100.0 1.9E-73 4.1E-78  549.1  40.6  434   23-503    24-462 (463)
 20 PLN02738 carotene beta-ring hy 100.0 5.2E-73 1.1E-77  555.4  40.0  434   49-505   150-595 (633)
 21 PLN02169 fatty acid (omega-1)- 100.0 1.5E-72 3.2E-77  545.2  41.3  449   31-505    32-500 (500)
 22 PLN02196 abscisic acid 8'-hydr 100.0 1.6E-72 3.4E-77  542.2  38.9  451    3-503     8-461 (463)
 23 PLN03195 fatty acid omega-hydr 100.0 1.7E-72 3.6E-77  550.7  38.4  450   32-504    32-515 (516)
 24 PF00067 p450:  Cytochrome P450 100.0 2.7E-73 5.8E-78  556.3  28.3  452   32-501     1-463 (463)
 25 KOG0684 Cytochrome P450 [Secon 100.0 2.2E-71 4.7E-76  486.6  34.0  442   30-505    31-485 (486)
 26 PLN02987 Cytochrome P450, fami 100.0 7.2E-71 1.6E-75  528.2  40.7  462    1-505     1-469 (472)
 27 PLN03141 3-epi-6-deoxocathaste 100.0 4.6E-71 9.9E-76  531.4  38.2  435   26-504     3-449 (452)
 28 PLN02302 ent-kaurenoic acid ox 100.0 2.1E-70 4.5E-75  535.3  42.1  437   27-505    39-488 (490)
 29 PLN02936 epsilon-ring hydroxyl 100.0 4.2E-70 9.2E-75  528.4  36.7  450   33-505    15-482 (489)
 30 PLN02426 cytochrome P450, fami 100.0 2.5E-68 5.3E-73  514.8  42.1  443   38-505    49-500 (502)
 31 PLN02648 allene oxide synthase 100.0 7.1E-61 1.5E-65  455.1  28.6  413   27-476    14-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 2.4E-55 5.3E-60  412.9  32.6  381   52-504    24-410 (411)
 33 PF08492 SRP72:  SRP72 RNA-bind  83.6    0.68 1.5E-05   29.6   1.3    8  419-426    44-51  (59)
 34 PF05393 Hum_adeno_E3A:  Human   83.3     2.8 6.1E-05   28.8   4.1   23    1-23     35-57  (94)
 35 PF12508 DUF3714:  Protein of u  59.9     2.3 4.9E-05   35.5  -0.7   43  357-400    52-94  (200)
 36 PF12554 MOZART1:  Mitotic-spin  54.6      36 0.00079   20.8   4.0   42  298-339     6-47  (48)
 37 PF05952 ComX:  Bacillus compet  47.5      19 0.00041   22.9   2.1   23  320-342     4-26  (57)
 38 PF12273 RCR:  Chitin synthesis  47.3      15 0.00032   28.5   2.1    8   38-45     32-39  (130)
 39 PRK14750 kdpF potassium-transp  45.5      47   0.001   17.5   3.2   22    1-22      1-22  (29)
 40 PF01102 Glycophorin_A:  Glycop  43.5      34 0.00073   26.0   3.3    6    5-10     70-75  (122)
 41 PF01102 Glycophorin_A:  Glycop  41.4      29 0.00063   26.4   2.7   23    4-26     72-94  (122)
 42 PF09201 SRX:  SRX;  InterPro:   38.7      27 0.00058   26.8   2.1   22  446-467    19-40  (148)
 43 KOG3653 Transforming growth fa  36.6 1.3E+02  0.0029   29.0   6.6   38   60-97    220-257 (534)
 44 KOG3506 40S ribosomal protein   36.4      17 0.00036   22.6   0.6   11  438-448    12-22  (56)
 45 COG0851 MinE Septum formation   35.6      74  0.0016   22.4   3.7   43  304-346     4-53  (88)
 46 KOG0114 Predicted RNA-binding   35.3 1.6E+02  0.0035   21.6   5.4   61   28-91     10-76  (124)
 47 PF11138 DUF2911:  Protein of u  32.5      52  0.0011   26.0   3.0   42  380-422    51-99  (145)
 48 PHA03049 IMV membrane protein;  31.1 1.3E+02  0.0028   19.8   4.0    6   56-61     58-63  (68)
 49 TIGR03779 Bac_Flav_CT_M Bacter  31.0      13 0.00029   34.9  -0.6   44  357-401   255-298 (410)
 50 PHA03162 hypothetical protein;  30.7      51  0.0011   25.1   2.5   24  441-464     2-25  (135)
 51 PF05261 Tra_M:  TraM protein,   30.3 2.5E+02  0.0054   21.4   7.3   91  255-345    12-123 (127)
 52 PF13625 Helicase_C_3:  Helicas  30.2   1E+02  0.0023   23.7   4.4   42   50-93     74-115 (129)
 53 COG1707 ACT domain-containing   30.1      62  0.0013   25.8   3.0   40   49-88    153-197 (218)
 54 PF14483 Cut8_M:  Cut8 dimerisa  29.4   1E+02  0.0022   17.8   3.0   21  317-337    14-35  (38)
 55 PRK06789 flagellar motor switc  28.3      62  0.0013   22.1   2.4   39  363-401    21-62  (74)
 56 PF14550 Peptidase_U35_2:  Puta  28.3      36 0.00077   25.9   1.4   21  380-400    72-92  (122)
 57 PF12444 Sox_N:  Sox developmen  28.1      39 0.00085   23.6   1.4   19  456-474    61-79  (84)
 58 PF13893 RRM_5:  RNA recognitio  27.7 1.6E+02  0.0034   18.3   4.9   35   57-91      2-40  (56)
 59 PRK14748 kdpF potassium-transp  26.0 1.1E+02  0.0025   16.1   3.2   21    1-21      1-21  (29)
 60 COG5329 Phosphoinositide polyp  23.2      66  0.0014   31.8   2.5   27   50-76    293-319 (570)
 61 PF14164 YqzH:  YqzH-like prote  21.9 2.5E+02  0.0054   18.5   4.3   38  147-191    26-63  (64)
 62 KOG1412 Aspartate aminotransfe  21.6 3.2E+02   0.007   24.9   6.0   76  279-372   330-407 (410)
 63 PF12606 RELT:  Tumour necrosis  20.7 1.8E+02  0.0039   18.1   3.1   19    2-20      3-21  (50)
 64 PF05568 ASFV_J13L:  African sw  20.1   1E+02  0.0022   23.8   2.4    8    5-12     35-42  (189)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.7e-87  Score=626.96  Aligned_cols=459  Identities=45%  Similarity=0.758  Sum_probs=404.0

Q ss_pred             CCCCCCCCCCCccccccccCCCCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCC-ccccc
Q 041279           28 SAKFPPGPPGLPIIGNLHQFDATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPV-LLGLQ  106 (505)
Q Consensus        28 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~-~~~~~  106 (505)
                      +.++||||+++|++||++++...+++..+.++.++|||+|++++|..++|||+|++.++|++.+++..|++|+. .....
T Consensus        24 ~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~  103 (489)
T KOG0156|consen   24 RRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLK  103 (489)
T ss_pred             CCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHH
Confidence            38899999999999999998444599999999999999999999999999999999999999999999999997 22445


Q ss_pred             ccccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHHHHHHHH
Q 041279          107 TLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEIAMTCV  186 (505)
Q Consensus       107 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~~~~~  186 (505)
                      ...+++.+++++++|+.|+.+||.....+++.+.+++....-.++++.+++.+.+ .+       .+.+||+.+.+..++
T Consensus       104 ~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~-------~~~~vdl~~~l~~~~  175 (489)
T KOG0156|consen  104 YLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SK-------KGEPVDLSELLDLLV  175 (489)
T ss_pred             HhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cC-------CCceeeHHHHHHHHH
Confidence            5666778999998999999999999999999999999888889999999999987 21       237899999999999


Q ss_pred             HHHHHHHHhcccccCCChhHHHHHHHHHHHHHHhhccccccCcccc-chhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 041279          187 RNIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLSGTIFFSDCSFS-FIGNCLDRITGMHRRLQNHFKDCDRYYQQLIDD  265 (505)
Q Consensus       187 ~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  265 (505)
                      .++|++++||.++...+.+...++.+++.+.....+.....++ +| ++. ++++..+..++.+.....+.++++..|++
T Consensus       176 ~nvI~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~-~p~~l~-~~~~~~g~~~~~~~~~~~~~~~~~~~i~e  253 (489)
T KOG0156|consen  176 GNVICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDY-FPFLLR-WLDGISGLEKRLKKVSKRLDEFLERIIDE  253 (489)
T ss_pred             HHHHHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHH-hhHHHH-hcccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999986434436688999999999998888888 88 454 55544466777777777799999999999


Q ss_pred             hcCCCCcccccccCcHHHHHHhcccCC---CCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHHHh
Q 041279          266 HLDPKRPQAARQQGDLIDDLLNLTKAG---DLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQEEVTSV  342 (505)
Q Consensus       266 ~~~~~~~~~~~~~~d~~~~ll~~~~~~---~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  342 (505)
                      +++.. .. ++. .|+++.+++..+++   .++++++...+..+++||+|||++++.|++.+|++||++|+|+|+||+++
T Consensus       254 h~~~~-~~-~~~-~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~v  330 (489)
T KOG0156|consen  254 HREKI-GD-EEG-RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEV  330 (489)
T ss_pred             HHhhh-cc-CCC-CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            98765 21 222 79999999886542   38999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCCCCCCCChhHHHHHHHhcCCCCCCC-CccccccccceecCeecCCCcEEEechhhhccCCCCCCCCCCCCCC
Q 041279          343 AKDKGFVDEDDIPRLEYINAVIKETMRIQPAAQ-FIPKATTERCVIDGYHIPAETMVLVNVWAIGRDPQVWDKPDKFIPE  421 (505)
Q Consensus       343 ~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~-~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~  421 (505)
                      ++.++.++.+|+.+||||+|||+||+|++|++| .++|.+.+|+.++||.|||||.|+++.+++||||++|+||++|+||
T Consensus       331 vG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PE  410 (489)
T KOG0156|consen  331 VGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPE  410 (489)
T ss_pred             hCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChh
Confidence            998888999999999999999999999999999 8899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCccccCCCCeeEEe
Q 041279          422 RFVGSNIDMGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVA  501 (505)
Q Consensus       422 R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (505)
                      ||++++ +.+.....++|||.|+|.|||..+|++|+.+++|.||++|||+++.+    +++..+. +++...+.|+.+..
T Consensus       411 RFl~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~-~~~~~~~~pl~~~~  484 (489)
T KOG0156|consen  411 RFLDSN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEA-GLTLKKKKPLKAVP  484 (489)
T ss_pred             hhcCCc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCccc-ccceecCCcceeee
Confidence            999974 22336789999999999999999999999999999999999998766    2334444 37778888999998


Q ss_pred             ecCC
Q 041279          502 TKSI  505 (505)
Q Consensus       502 ~~~~  505 (505)
                      .+|.
T Consensus       485 ~~r~  488 (489)
T KOG0156|consen  485 VPRL  488 (489)
T ss_pred             ecCC
Confidence            8874


No 2  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=3.5e-81  Score=610.41  Aligned_cols=471  Identities=45%  Similarity=0.809  Sum_probs=381.0

Q ss_pred             hhhcCCCCCCCCCCCCccccccccCCCCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCCc
Q 041279           23 HRKNTSAKFPPGPPGLPIIGNLHQFDATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPVL  102 (505)
Q Consensus        23 ~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~  102 (505)
                      ....++.+.||||+++|++|++..+...++..++.+++++||++|++++++.++++++||+++++++.++...|..++..
T Consensus        21 ~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~  100 (499)
T PLN03234         21 STTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLL  100 (499)
T ss_pred             HhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCc
Confidence            33345667889999999999998874446777899999999999999999999999999999999999988888877754


Q ss_pred             ccccccccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHHHH
Q 041279          103 LGLQTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEIA  182 (505)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~  182 (505)
                      .........+....+...++.|+++|+.+..++|+++++..+.+.+.+.++++++.+.+...       ++.++|+.+++
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~-------~~~~vd~~~~~  173 (499)
T PLN03234        101 KGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAAD-------QSGTVDLSELL  173 (499)
T ss_pred             hhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhcc-------CCCeEEHHHHH
Confidence            33332222222333445678999999986579999999999999999999999999975443       35579999999


Q ss_pred             HHHHHHHHHHHHhcccccCCChhHHHHHHHHHHHHHHhhccccccCccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 041279          183 MTCVRNIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRITGMHRRLQNHFKDCDRYYQQL  262 (505)
Q Consensus       183 ~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (505)
                      ..+++++++.++||.+++..+.+. ..+.+...+............. +|++. ++..+.+..++..++.+.+.+++.++
T Consensus       174 ~~~t~dvi~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~p~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~  250 (499)
T PLN03234        174 LSFTNCVVCRQAFGKRYNEYGTEM-KRFIDILYETQALLGTLFFSDL-FPYFG-FLDNLTGLSARLKKAFKELDTYLQEL  250 (499)
T ss_pred             HHHHHHHHHHHHhCCcccccchhH-HHHHHHHHHHHHHcCCCcHHHH-hhHHH-HhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999887653332 4455544444433322222222 45433 23333334556778888899999999


Q ss_pred             HHhhcCCCCcccccccCcHHHHHHhcccCC----CCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHH
Q 041279          263 IDDHLDPKRPQAARQQGDLIDDLLNLTKAG----DLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQEE  338 (505)
Q Consensus       263 i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~----~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  338 (505)
                      |+++++....+. . ..|+++.|++..+++    .++++++..++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       251 i~~~~~~~~~~~-~-~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~E  328 (499)
T PLN03234        251 LDETLDPNRPKQ-E-TESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDE  328 (499)
T ss_pred             HHHHHhhcccCC-C-cccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            988765432211 1 268999888764332    5899999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCCCCCCCChhHHHHHHHhcCCCCCCCC-ccccccccceecCeecCCCcEEEechhhhccCCCCC-CCCC
Q 041279          339 VTSVAKDKGFVDEDDIPRLEYINAVIKETMRIQPAAQF-IPKATTERCVIDGYHIPAETMVLVNVWAIGRDPQVW-DKPD  416 (505)
Q Consensus       339 i~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~-~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~  416 (505)
                      ++++.++.+.++.+++.+||||+|||+||||++|+++. +.|.+.+|++++||.|||||.|.++++.+||||++| +||+
T Consensus       329 i~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~  408 (499)
T PLN03234        329 VRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPN  408 (499)
T ss_pred             HHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChh
Confidence            99999876778999999999999999999999999995 579999999999999999999999999999999999 8999


Q ss_pred             CCCCCCCCCCCCC--CCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCccccCC
Q 041279          417 KFIPERFVGSNID--MGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKK  494 (505)
Q Consensus       417 ~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (505)
                      +||||||+++...  ....+..++|||+|+|.|+|+++|++|+++++|.|+++|+|+++++.++.++......+++.+++
T Consensus       409 ~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (499)
T PLN03234        409 EFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKK  488 (499)
T ss_pred             hcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccC
Confidence            9999999975432  12346789999999999999999999999999999999999998765444455556678888899


Q ss_pred             CCeeEEeecCC
Q 041279          495 KPLKLVATKSI  505 (505)
Q Consensus       495 ~~~~~~~~~~~  505 (505)
                      +++.+.+++|+
T Consensus       489 ~~~~~~~~~~~  499 (499)
T PLN03234        489 EHLVLAPTKHI  499 (499)
T ss_pred             CCeEEEeecCC
Confidence            99999999986


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.7e-81  Score=577.13  Aligned_cols=458  Identities=23%  Similarity=0.342  Sum_probs=360.6

Q ss_pred             hcCCCCCCCCCCCCccccccccCCC-CchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCC--C
Q 041279           25 KNTSAKFPPGPPGLPIIGNLHQFDA-TNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRP--V  101 (505)
Q Consensus        25 ~~~~~~~ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~--~  101 (505)
                      .+..++-+|+|+++|++|++..+.. ........+.+.++|+++.+..+-+|.++|+||+.+++|+.++.++|..+.  .
T Consensus        26 ~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~  105 (499)
T KOG0158|consen   26 SYWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPI  105 (499)
T ss_pred             hhhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCC
Confidence            3455557788888999999988753 222444455555559999999999999999999999999999999999843  2


Q ss_pred             cccccccccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHHH
Q 041279          102 LLGLQTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEI  181 (505)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~  181 (505)
                      ......  ......++...|++|+++|..+ +|.||+.+++++.+.+.+.+.++++.+.+...       .+..+++.+.
T Consensus       106 ~~d~~~--~l~~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~-------~~~~~~~~dl  175 (499)
T KOG0158|consen  106 YGDPED--PLSALNLFFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSE-------GGQEGEIKDL  175 (499)
T ss_pred             cCCCCC--cccccCchhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhc-------ccCCccHHHH
Confidence            222221  1122456677799999999998 89999999999999999999999999988553       1257889999


Q ss_pred             HHHHHHHHHHHHHhcccccCCChhHHHHHHHHHHHHHHhhccccc----cCccccchhhhhhhhhhHHHHHHHHHHHHHH
Q 041279          182 AMTCVRNIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLSGTIFF----SDCSFSFIGNCLDRITGMHRRLQNHFKDCDR  257 (505)
Q Consensus       182 ~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~  257 (505)
                      +.++|.|+|+.++||.+.++..... ..+..........+.....    ..+.+|.+.+.+.    ......+..+.+.+
T Consensus       176 ~~~yT~DVI~~~AfG~~~~s~~d~~-~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~----~~~~~~~~~~~~~~  250 (499)
T KOG0158|consen  176 CARYTTDVIGSCAFGLDANSLRDPK-AEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLR----VKLFPEDVTDFFRK  250 (499)
T ss_pred             HHHHHHHHHhHhhcccchhhhcCch-HHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhh----cccChHHHHHHHHH
Confidence            9999999999999999888864332 3444333333332111100    0111222221111    11112334455566


Q ss_pred             HHHHHHHhhcCCCCcccccccCcHHHHHHhcccC-------C-CCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCc
Q 041279          258 YYQQLIDDHLDPKRPQAARQQGDLIDDLLNLTKA-------G-DLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNP  329 (505)
Q Consensus       258 ~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-------~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p  329 (505)
                      .+...++.|.+.    +..+ +|+++.+++.+.+       + .+|.+|++++++.|++||.||||++++.++|.||.||
T Consensus       251 ~v~~~v~~R~~~----~~~r-~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~P  325 (499)
T KOG0158|consen  251 LVNSRVEQREKE----NIER-NDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNP  325 (499)
T ss_pred             HHHHHHHHHHhc----CCCC-chHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcCh
Confidence            666666666221    1222 8999999988743       1 4999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCCChhHHHHHHHhcCCCCCCCCccccccccceec-CeecCCCcEEEechhhhccC
Q 041279          330 EAMKKAQEEVTSVAKDKGFVDEDDIPRLEYINAVIKETMRIQPAAQFIPKATTERCVID-GYHIPAETMVLVNVWAIGRD  408 (505)
Q Consensus       330 ~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~~~-g~~ip~G~~v~~~~~~~~~d  408 (505)
                      ++|+|||+||+++..+...++++.+.+|+||++||+||||+||+++.+.|.+++|++++ ++.||||+.|+++++++|||
T Consensus       326 dvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~D  405 (499)
T KOG0158|consen  326 DVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHD  405 (499)
T ss_pred             HHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCC
Confidence            99999999999997765559999999999999999999999999998889999999999 99999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCC
Q 041279          409 PQVWDKPDKFIPERFVGSNIDMGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPG  488 (505)
Q Consensus       409 ~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  488 (505)
                      |++||||++|+||||.+++.+ ..++..|+|||.|||.|+|++||.+|+|+.|++||++|+++..+ .+..+ ......+
T Consensus       406 p~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~-~t~~~-~~~~~~~  482 (499)
T KOG0158|consen  406 PEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCP-TTIIP-LEGDPKG  482 (499)
T ss_pred             cccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCC-cccCc-ccCCccc
Confidence            999999999999999987644 45788999999999999999999999999999999999999877 33222 2223357


Q ss_pred             ccccCCCCeeEEeecCC
Q 041279          489 LTQHKKKPLKLVATKSI  505 (505)
Q Consensus       489 ~~~~~~~~~~~~~~~~~  505 (505)
                      +++.|+.+|.+++.+|.
T Consensus       483 ~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  483 FTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             eeeecCCceEEEEEeCC
Confidence            88899999999999983


No 4  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=4.3e-80  Score=604.59  Aligned_cols=465  Identities=27%  Similarity=0.479  Sum_probs=362.6

Q ss_pred             CCCCCCCCCCCCccccccccCCCC-chhHHHHHHHHhhC-CeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCCccc
Q 041279           27 TSAKFPPGPPGLPIIGNLHQFDAT-NLAFYLWKLSKQYG-PIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPVLLG  104 (505)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~~~~~-~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~  104 (505)
                      ++.+.||||+++|++|+++.+..+ ..+..+.++.++|| ++|++++|++++|+|+||+.+++++.++...|..++....
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~  133 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA  133 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence            466789999999999999877433 34567889999999 8999999999999999999999999998888888875433


Q ss_pred             ccccccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHHHHHH
Q 041279          105 LQTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEIAMT  184 (505)
Q Consensus       105 ~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~~~  184 (505)
                      ......+..+.++..+|+.|+++|+.+..+++++..++.+.+.+.++++.+++.+.+...       .+.++|+.+.+.+
T Consensus       134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-------~~~~vd~~~~~~~  206 (543)
T PLN02971        134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVK-------NSEPVDLRFVTRH  206 (543)
T ss_pred             hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCCceehHHHHHH
Confidence            322222223457777899999999999777888777788888888888889888765432       3457999999999


Q ss_pred             HHHHHHHHHHhcccccCCC----hhHHHHHHHHHHHHHHhhcc---ccccCccccchhhhhhhhhhHHHHHHHHHHHHHH
Q 041279          185 CVRNIIFRVTFSKRFEDDG----PAAVNRLDYLLAETQLLSGT---IFFSDCSFSFIGNCLDRITGMHRRLQNHFKDCDR  257 (505)
Q Consensus       185 ~~~~~i~~~~fg~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~  257 (505)
                      +++++++.++||.++...+    .+...+..+.+...+.....   ....++ +|++. .++ +.+..+..++..+.+.+
T Consensus       207 ~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~l~-~~~-~~~~~~~~~~~~~~~~~  283 (543)
T PLN02971        207 YCGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDY-LPMLT-GLD-LNGHEKIMRESSAIMDK  283 (543)
T ss_pred             HHHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHh-CCchh-hhc-ccchHHHHHHHHHHHHH
Confidence            9999999999999874321    11001222223333221111   112233 44443 111 11223444555666777


Q ss_pred             HHHHHHHhhcCCCCcccccccCcHHHHHHhcccC-C--CCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHH
Q 041279          258 YYQQLIDDHLDPKRPQAARQQGDLIDDLLNLTKA-G--DLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKK  334 (505)
Q Consensus       258 ~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-~--~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~  334 (505)
                      ++...|+++++..+.+......|+++.|++..++ +  .++++++.+++.++++||+|||+++++|++++|+.||++|+|
T Consensus       284 ~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~k  363 (543)
T PLN02971        284 YHDPIIDERIKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHK  363 (543)
T ss_pred             HHHHHHHHHHHHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHH
Confidence            8888887765432211111126899999986543 2  489999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCCCCCCCCCChhHHHHHHHhcCCCCCCC-CccccccccceecCeecCCCcEEEechhhhccCCCCCC
Q 041279          335 AQEEVTSVAKDKGFVDEDDIPRLEYINAVIKETMRIQPAAQ-FIPKATTERCVIDGYHIPAETMVLVNVWAIGRDPQVWD  413 (505)
Q Consensus       335 l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~-~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~  413 (505)
                      +++||+++++.++.++.+++.+||||+|||+||||++|+++ .++|.+.+|++++||.||||+.|+++.+++||||++|+
T Consensus       364 l~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~  443 (543)
T PLN02971        364 AMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWS  443 (543)
T ss_pred             HHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCC
Confidence            99999999987778999999999999999999999999999 58899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCC--CCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCccc
Q 041279          414 KPDKFIPERFVGSNID--MGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQ  491 (505)
Q Consensus       414 ~p~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  491 (505)
                      ||++|+||||++++.+  ....+..|+|||+|+|.|+|++||++|+++++|+||++|+|++.++.  .+....+.++ ++
T Consensus       444 dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~-~~  520 (543)
T PLN02971        444 DPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSE--TRVELMESSH-DM  520 (543)
T ss_pred             CccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCC--CCcchhhhcC-cc
Confidence            9999999999975322  11245689999999999999999999999999999999999987653  2345555566 67


Q ss_pred             cCCCCeeEEeecC
Q 041279          492 HKKKPLKLVATKS  504 (505)
Q Consensus       492 ~~~~~~~~~~~~~  504 (505)
                      ..++++.+.+.||
T Consensus       521 ~~~~~~~~~~~~~  533 (543)
T PLN02971        521 FLSKPLVMVGELR  533 (543)
T ss_pred             cccccceeeeeec
Confidence            5556999999887


No 5  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.9e-79  Score=598.49  Aligned_cols=474  Identities=33%  Similarity=0.648  Sum_probs=377.9

Q ss_pred             HHHHHhhhcCCCCCCCCCCCCccccccccCCCCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCcccc
Q 041279           18 FLLQKHRKNTSAKFPPGPPGLPIIGNLHQFDATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFA   97 (505)
Q Consensus        18 ~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~   97 (505)
                      ++.+.+.+.++.+.||||.++|++|+++.+ ..++...+.+|+++||++|+++++++++++++||+++++++.++...|.
T Consensus        22 ~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~  100 (517)
T PLN02687         22 LLRRGGSGKHKRPLPPGPRGWPVLGNLPQL-GPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFS  100 (517)
T ss_pred             HhccccCCCCCCCCCccCCCCCccccHHhc-CCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhh
Confidence            333333444566788999999999999887 4567888999999999999999999999999999999999998877787


Q ss_pred             CCCCcccccccccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccc
Q 041279           98 GRPVLLGLQTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPIN  177 (505)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~  177 (505)
                      .++...........+.+.+++.+|+.|+++|+.+..++|+.++++.+.+.+.+++.++++.+.+..        ++.++|
T Consensus       101 ~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~--------~~~~vd  172 (517)
T PLN02687        101 NRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH--------GTAPVN  172 (517)
T ss_pred             cCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc--------CCCcee
Confidence            776443322222223456777789999999999854899999999999999999999999997632        245799


Q ss_pred             hHHHHHHHHHHHHHHHHhcccccCCCh-hHHHHHHHHHHHHHHhhccccccCccccchhhhhhhhhhHHHHHHHHHHHHH
Q 041279          178 LSEIAMTCVRNIIFRVTFSKRFEDDGP-AAVNRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRITGMHRRLQNHFKDCD  256 (505)
Q Consensus       178 l~~~~~~~~~~~i~~~~fg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~  256 (505)
                      +.+++..+++|+++..+||.++...+. +....+.+.+..............+ +|++. ++.. ....++..+..+.+.
T Consensus       173 ~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~l~-~l~~-~~~~~~~~~~~~~~~  249 (517)
T PLN02687        173 LGQLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDF-VPALR-WLDL-QGVVGKMKRLHRRFD  249 (517)
T ss_pred             HHHHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHH-hhhHH-HhCc-ccHHHHHHHHHHHHH
Confidence            999999999999999999998754321 1114455555555444332222233 55433 2211 112344555677788


Q ss_pred             HHHHHHHHhhcCCCCcccccccCcHHHHHHhcccC-------CCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCc
Q 041279          257 RYYQQLIDDHLDPKRPQAARQQGDLIDDLLNLTKA-------GDLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNP  329 (505)
Q Consensus       257 ~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~-------~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p  329 (505)
                      +++.+.++++++....... ...|+++.+++..++       +.++++++.+++.++++||+|||+++++|++++|++||
T Consensus       250 ~~~~~~i~~r~~~~~~~~~-~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P  328 (517)
T PLN02687        250 AMMNGIIEEHKAAGQTGSE-EHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHP  328 (517)
T ss_pred             HHHHHHHHHHHHhccccCc-ccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCH
Confidence            8888888887765332111 227899999976432       25899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCCChhHHHHHHHhcCCCCCCC-CccccccccceecCeecCCCcEEEechhhhccC
Q 041279          330 EAMKKAQEEVTSVAKDKGFVDEDDIPRLEYINAVIKETMRIQPAAQ-FIPKATTERCVIDGYHIPAETMVLVNVWAIGRD  408 (505)
Q Consensus       330 ~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~-~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d  408 (505)
                      ++|+|+++|++++.+.++.++.+++.+||||+|||+||||++|+++ .++|.+.+|++++|+.||+|+.|.++.+++|||
T Consensus       329 ~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d  408 (517)
T PLN02687        329 DILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARD  408 (517)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCC
Confidence            9999999999999887777899999999999999999999999999 589999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCC----CCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCcc
Q 041279          409 PQVWDKPDKFIPERFVGSNIDM----GGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFE  484 (505)
Q Consensus       409 ~~~~~~p~~F~P~R~l~~~~~~----~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~  484 (505)
                      |++|+||++|+||||++++...    ...+..++|||+|+|.|+|++||++|+++++|+||++|+|++.++....++...
T Consensus       409 ~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  488 (517)
T PLN02687        409 PEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNME  488 (517)
T ss_pred             cccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcc
Confidence            9999999999999999753211    123467999999999999999999999999999999999998776433334444


Q ss_pred             ccCCccccCCCCeeEEeecC
Q 041279          485 ATPGLTQHKKKPLKLVATKS  504 (505)
Q Consensus       485 ~~~~~~~~~~~~~~~~~~~~  504 (505)
                      ...++++.++.++.++++||
T Consensus       489 ~~~~~~~~~~~~~~~~~~~R  508 (517)
T PLN02687        489 EAYGLTLQRAVPLMVHPRPR  508 (517)
T ss_pred             cccceeeecCCCeEEeeccC
Confidence            45667777778999999998


No 6  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=6.7e-79  Score=593.05  Aligned_cols=474  Identities=41%  Similarity=0.733  Sum_probs=366.4

Q ss_pred             HHHHHhhhcCCCCCCCCCCCCccccccccCCCCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCcccc
Q 041279           18 FLLQKHRKNTSAKFPPGPPGLPIIGNLHQFDATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFA   97 (505)
Q Consensus        18 ~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~   97 (505)
                      ++.+.+...++.+.||||+++|++||++.+...++...+.+|+++||++|++++++.++++|+||+.+++++.++...|.
T Consensus        17 ~~~~~~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~   96 (502)
T PLN02966         17 FFLYQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFA   96 (502)
T ss_pred             HHHHhccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCccccc
Confidence            33344444556678899999999999988755567889999999999999999999999999999999999998777776


Q ss_pred             CCCCcccccccccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccc
Q 041279           98 GRPVLLGLQTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPIN  177 (505)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~  177 (505)
                      +++..........+.....+..+|+.|+.+|+.+..++|++++++.+.+.+.+.+.++++.+.+...       .++++|
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~-------~~~~vd  169 (502)
T PLN02966         97 DRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAAD-------KSEVVD  169 (502)
T ss_pred             CCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCCcee
Confidence            6554332222222222334555689999999995589999999999999999999999999976543       355799


Q ss_pred             hHHHHHHHHHHHHHHHHhcccccCCChhHHHHHHHHHHHHHHhhccccccCccccchhhhhhhhhhHHHHHHHHHHHHHH
Q 041279          178 LSEIAMTCVRNIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRITGMHRRLQNHFKDCDR  257 (505)
Q Consensus       178 l~~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~  257 (505)
                      +.+++..+++++++.++||.+++..+.+. ..+.+.+...........+..+ +|++. .+..+.+..+......+...+
T Consensus       170 l~~~~~~~t~dvi~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~p~~~-~~~~~~~~~~~~~~~~~~~~~  246 (502)
T PLN02966        170 ISELMLTFTNSVVCRQAFGKKYNEDGEEM-KRFIKILYGTQSVLGKIFFSDF-FPYCG-FLDDLSGLTAYMKECFERQDT  246 (502)
T ss_pred             HHHHHHHHHHHHHHHHHhCCccCccchHH-HHHHHHHHHHHHHhCcccHHHh-hchhh-hhhhhccHHHHHHHHHHHHHH
Confidence            99999999999999999999987654332 4444444444433333222233 44322 121111112222334455566


Q ss_pred             HHHHHHHhhcCCCCcccccccCcHHHHHHhcccC----CCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHH
Q 041279          258 YYQQLIDDHLDPKRPQAARQQGDLIDDLLNLTKA----GDLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMK  333 (505)
Q Consensus       258 ~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~----~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~  333 (505)
                      ++...++++.+...... . ..|+++.+++..++    +.++++++..+++++++||+|||+++++|++++|++||++|+
T Consensus       247 ~~~~~i~~~~~~~~~~~-~-~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~  324 (502)
T PLN02966        247 YIQEVVNETLDPKRVKP-E-TESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLK  324 (502)
T ss_pred             HHHHHHHHHHhcccccc-c-cccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHH
Confidence            66666665543221111 1 26899999875433    258999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCC--CCCCCCCCCCChhHHHHHHHhcCCCCCCC-CccccccccceecCeecCCCcEEEechhhhccCCC
Q 041279          334 KAQEEVTSVAKDK--GFVDEDDIPRLEYINAVIKETMRIQPAAQ-FIPKATTERCVIDGYHIPAETMVLVNVWAIGRDPQ  410 (505)
Q Consensus       334 ~l~~Ei~~~~~~~--~~~~~~~l~~lp~l~a~i~EtlRl~~~~~-~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~  410 (505)
                      |+++|++++.+.+  +.++.+++++||||+|||+||||++|+++ .++|.+.+|++++||.|||||.|.++++++||||+
T Consensus       325 kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~  404 (502)
T PLN02966        325 KAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEK  404 (502)
T ss_pred             HHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcc
Confidence            9999999998743  35788999999999999999999999999 47899999999999999999999999999999999


Q ss_pred             CC-CCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCc
Q 041279          411 VW-DKPDKFIPERFVGSNIDMGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGL  489 (505)
Q Consensus       411 ~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  489 (505)
                      +| |||++|+||||++++.+....+..|+|||+|+|.|+|++||++|+++++|.||++|+|++.++.+.+.+..+...++
T Consensus       405 ~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~  484 (502)
T PLN02966        405 EWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGL  484 (502)
T ss_pred             cccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCe
Confidence            99 99999999999975432223457899999999999999999999999999999999999887754444444455677


Q ss_pred             cccCCCCeeEEeec
Q 041279          490 TQHKKKPLKLVATK  503 (505)
Q Consensus       490 ~~~~~~~~~~~~~~  503 (505)
                      +..++.++.++.+|
T Consensus       485 ~~~~~~~~~~~~~~  498 (502)
T PLN02966        485 AMHKSQHLKLVPEK  498 (502)
T ss_pred             eeccCCCeEEEEEe
Confidence            66555577766655


No 7  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=6.1e-79  Score=594.77  Aligned_cols=461  Identities=36%  Similarity=0.663  Sum_probs=362.0

Q ss_pred             CCCCCCCCCCCCccccccccCCCCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCCccccc
Q 041279           27 TSAKFPPGPPGLPIIGNLHQFDATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPVLLGLQ  106 (505)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~  106 (505)
                      ++.+.||||.++|++|+++.+ ....+..+.+|+++||++|++++++.++|+|+||+++++++.++...|..++......
T Consensus        33 ~~~~~ppgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~  111 (516)
T PLN02183         33 RRLPYPPGPKGLPIIGNMLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAIS  111 (516)
T ss_pred             CCCCCCcCCCCCCeeccHHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchh
Confidence            456789999999999999876 4445678899999999999999999999999999999999998877777766433222


Q ss_pred             ccccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHHHHHHHH
Q 041279          107 TLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEIAMTCV  186 (505)
Q Consensus       107 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~~~~~  186 (505)
                      ....++.+++++.+|+.|+++|+.+..++|+.+.++.+.+. .++++.+++.+...         .+.++|+.+++..++
T Consensus       112 ~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~---------~~~~v~~~~~~~~~~  181 (516)
T PLN02183        112 YLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSN---------IGKPVNIGELIFTLT  181 (516)
T ss_pred             ccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhc---------CCCcEeHHHHHHHHH
Confidence            22222235567778999999999865799999999988885 46788899888542         255799999999999


Q ss_pred             HHHHHHHHhcccccCCChhHHHHHHHHHHHHHHhhccccccCccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 041279          187 RNIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRITGMHRRLQNHFKDCDRYYQQLIDDH  266 (505)
Q Consensus       187 ~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  266 (505)
                      .++++.++||.+.+..   . .++.+.+..............+ +|++. ++.. ....++..+..+.+.+++.++++++
T Consensus       182 ~~vi~~~~fG~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~-~p~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~  254 (516)
T PLN02183        182 RNITYRAAFGSSSNEG---Q-DEFIKILQEFSKLFGAFNVADF-IPWLG-WIDP-QGLNKRLVKARKSLDGFIDDIIDDH  254 (516)
T ss_pred             HHHHHhHhhcCcccch---H-HHHHHHHHHHHHHhCCccHHHh-cchhH-hccc-ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999876542   1 3444444444443332222233 55543 2210 1123445556667777777777766


Q ss_pred             cCCCCcc-----cccccCcHHHHHHhcccC-------------CCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhC
Q 041279          267 LDPKRPQ-----AARQQGDLIDDLLNLTKA-------------GDLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKN  328 (505)
Q Consensus       267 ~~~~~~~-----~~~~~~d~~~~ll~~~~~-------------~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  328 (505)
                      +++...+     ......|+++.+++...+             ..++++++..++.++++||+|||+++++|++++|++|
T Consensus       255 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~  334 (516)
T PLN02183        255 IQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKS  334 (516)
T ss_pred             HHhhcccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhC
Confidence            4432211     111226899999974321             1489999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHHhhcCCCCCCCCCCCCChhHHHHHHHhcCCCCCCCCccccccccceecCeecCCCcEEEechhhhccC
Q 041279          329 PEAMKKAQEEVTSVAKDKGFVDEDDIPRLEYINAVIKETMRIQPAAQFIPKATTERCVIDGYHIPAETMVLVNVWAIGRD  408 (505)
Q Consensus       329 p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d  408 (505)
                      |++|+|+++|++++++.++.++.+++.+||||+|||+||||++|+++...|.+.+|++++||.|||||.|.++.+++|||
T Consensus       335 Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd  414 (516)
T PLN02183        335 PEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRD  414 (516)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCC
Confidence            99999999999999986667899999999999999999999999999777999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCC-CCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccC
Q 041279          409 PQVWDKPDKFIPERFVGSNID-MGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATP  487 (505)
Q Consensus       409 ~~~~~~p~~F~P~R~l~~~~~-~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  487 (505)
                      |++|+||++|+||||++++.. .......|+|||+|+|.|+|++||++|+++++|+|+++|++++.++.....+......
T Consensus       415 ~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~  494 (516)
T PLN02183        415 KNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVF  494 (516)
T ss_pred             ccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhcc
Confidence            999999999999999975431 1224568999999999999999999999999999999999998776432334433445


Q ss_pred             CccccCCCCeeEEeecCC
Q 041279          488 GLTQHKKKPLKLVATKSI  505 (505)
Q Consensus       488 ~~~~~~~~~~~~~~~~~~  505 (505)
                      +.+.++..++.+.++||.
T Consensus       495 ~~~~~~~~~~~~~~~~r~  512 (516)
T PLN02183        495 GLTAPRATRLVAVPTYRL  512 (516)
T ss_pred             ccccccCCCcEEEeecCC
Confidence            666556679999999884


No 8  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=3.4e-78  Score=585.80  Aligned_cols=471  Identities=32%  Similarity=0.611  Sum_probs=374.4

Q ss_pred             HHHHHhhhcCCCCCCCCCCCCccccccccCCCCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCcccc
Q 041279           18 FLLQKHRKNTSAKFPPGPPGLPIIGNLHQFDATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFA   97 (505)
Q Consensus        18 ~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~   97 (505)
                      ++.++.....+.+.||||+++|++|+++.+ ...++..+.+++++||+||+++++++++|+|+||+++++++.++...|.
T Consensus        19 ~~~~~~~~~~~~~~pPgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~   97 (504)
T PLN00110         19 FFIRSLLPKPSRKLPPGPRGWPLLGALPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFS   97 (504)
T ss_pred             HHHHHHhhcccCCCcccCCCCCeeechhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhc
Confidence            344344455677789999999999998776 4557788999999999999999999999999999999999998887888


Q ss_pred             CCCCcccccccccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccc
Q 041279           98 GRPVLLGLQTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPIN  177 (505)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~  177 (505)
                      .++..........+..+.+++.+|+.|+++|+.+..+.|++++++.+.+.+.+++..+++.+.+...       ++.+++
T Consensus        98 ~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~-------~g~~~~  170 (504)
T PLN00110         98 NRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQ-------RGEPVV  170 (504)
T ss_pred             CCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhcc-------CCCcEe
Confidence            7765433222223334566777799999999999656899999999999999999999998876432       356799


Q ss_pred             hHHHHHHHHHHHHHHHHhcccccC-CChhHHHHHHHHHHHHHHhhccccccCccccchhhhhhhhhhHHHHHHHHHHHHH
Q 041279          178 LSEIAMTCVRNIIFRVTFSKRFED-DGPAAVNRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRITGMHRRLQNHFKDCD  256 (505)
Q Consensus       178 l~~~~~~~~~~~i~~~~fg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~  256 (505)
                      +.+++..++.++|+.++||.++.. ...+. .++.+.+..............+ +|++. ++. .....++..+..+.+.
T Consensus       171 ~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~p~l~-~l~-~~~~~~~~~~~~~~~~  246 (504)
T PLN00110        171 VPEMLTFSMANMIGQVILSRRVFETKGSES-NEFKDMVVELMTTAGYFNIGDF-IPSIA-WMD-IQGIERGMKHLHKKFD  246 (504)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCchhH-HHHHHHHHHHHHHhccccHHHH-cchHh-hhC-cchHHHHHHHHHHHHH
Confidence            999999999999999999998632 22122 4455555555443322222233 45443 221 1122344555667777


Q ss_pred             HHHHHHHHhhcCCCCcccccccCcHHHHHHhcccC---CCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHH
Q 041279          257 RYYQQLIDDHLDPKRPQAARQQGDLIDDLLNLTKA---GDLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMK  333 (505)
Q Consensus       257 ~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~---~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~  333 (505)
                      +++.+.++++++......  ...|+++.+++..+.   +.++++++..+++.+++||+|||+++++|++++|++||++|+
T Consensus       247 ~~~~~~i~~~~~~~~~~~--~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~  324 (504)
T PLN00110        247 KLLTRMIEEHTASAHERK--GNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILK  324 (504)
T ss_pred             HHHHHHHHHHHhhccccc--cCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHH
Confidence            888888887765432211  126899999976422   268999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCCCCCCCCCCCChhHHHHHHHhcCCCCCCC-CccccccccceecCeecCCCcEEEechhhhccCCCCC
Q 041279          334 KAQEEVTSVAKDKGFVDEDDIPRLEYINAVIKETMRIQPAAQ-FIPKATTERCVIDGYHIPAETMVLVNVWAIGRDPQVW  412 (505)
Q Consensus       334 ~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~-~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~  412 (505)
                      |+++|++++.+.++.++.+++++||||+|||+||||++|+++ .++|.+.+|++++||.||||+.|.++.+++|+||++|
T Consensus       325 kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~  404 (504)
T PLN00110        325 RAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVW  404 (504)
T ss_pred             HHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhc
Confidence            999999999987667899999999999999999999999999 5889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCC---CCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCc
Q 041279          413 DKPDKFIPERFVGSNIDMG---GQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGL  489 (505)
Q Consensus       413 ~~p~~F~P~R~l~~~~~~~---~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  489 (505)
                      +||++|+||||++++....   .....++|||+|+|.|+|++||++|+++++|+|+++|+|++.++.   +.......++
T Consensus       405 ~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~  481 (504)
T PLN00110        405 ENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV---ELNMDEAFGL  481 (504)
T ss_pred             CCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC---ccCccccccc
Confidence            9999999999996532211   123579999999999999999999999999999999999987653   2333345678


Q ss_pred             cccCCCCeeEEeecCC
Q 041279          490 TQHKKKPLKLVATKSI  505 (505)
Q Consensus       490 ~~~~~~~~~~~~~~~~  505 (505)
                      ++.++.++.++++||.
T Consensus       482 ~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        482 ALQKAVPLSAMVTPRL  497 (504)
T ss_pred             ccccCCCceEeeccCC
Confidence            8888899999999983


No 9  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=9.1e-78  Score=588.05  Aligned_cols=480  Identities=32%  Similarity=0.556  Sum_probs=376.7

Q ss_pred             HHHHHHHHhhhcCCCCCCCCCCCCccccccccCCCCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCc
Q 041279           15 FLLFLLQKHRKNTSAKFPPGPPGLPIIGNLHQFDATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDL   94 (505)
Q Consensus        15 ~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~   94 (505)
                      ++.+...+.+..++.+.||||+++|++|++..+ ..+++..+.+++++||++|++++++.++++++||+.+++++.++..
T Consensus        17 ~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~   95 (514)
T PLN03112         17 VLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQL-GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDD   95 (514)
T ss_pred             HHHHHHccccccCCCCCccCCCCCCeeeeHHhc-CCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCc
Confidence            333333344555677889999999999999887 4567888999999999999999999999999999999999998887


Q ss_pred             cccCCCCcccccccccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCc
Q 041279           95 QFAGRPVLLGLQTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKV  174 (505)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  174 (505)
                      .|..++.........++...+++..+|+.|+++|+.+..++|+.++++.+.+.+.++++++++.+.+...       .+.
T Consensus        96 ~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~-------~~~  168 (514)
T PLN03112         96 VFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQ-------TGK  168 (514)
T ss_pred             ccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhc-------cCC
Confidence            8877665432222223333445666799999999997678999999999999999999999998765432       356


Q ss_pred             ccchHHHHHHHHHHHHHHHHhcccccCCCh---hHHHHHHHHHHHHHHhhccccccCccccchhhhhhhhhhHHHHHHHH
Q 041279          175 PINLSEIAMTCVRNIIFRVTFSKRFEDDGP---AAVNRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRITGMHRRLQNH  251 (505)
Q Consensus       175 ~v~l~~~~~~~~~~~i~~~~fg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~  251 (505)
                      ++|+.+.+..+++++++.++||.++.....   +....+..................+ +|++. ++.. .+..++..+.
T Consensus       169 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~-~~~~-~~~~~~~~~~  245 (514)
T PLN03112        169 PVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDY-LPAWR-WLDP-YGCEKKMREV  245 (514)
T ss_pred             eeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHh-ChHHH-hcCc-ccHHHHHHHH
Confidence            799999999999999999999998743221   1113444444444433222222223 45433 2210 1223445566


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccc-ccccCcHHHHHHhcccCC---CCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhh
Q 041279          252 FKDCDRYYQQLIDDHLDPKRPQA-ARQQGDLIDDLLNLTKAG---DLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMK  327 (505)
Q Consensus       252 ~~~~~~~~~~~i~~~~~~~~~~~-~~~~~d~~~~ll~~~~~~---~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~  327 (505)
                      .+.+.+++...++++++...... .....|+++.+++...++   .++++++.+++..+++||+|||+++++|++++|++
T Consensus       246 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~  325 (514)
T PLN03112        246 EKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIK  325 (514)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHh
Confidence            67777788888887665432211 112268999999864332   48999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHHHhhcCCCCCCCCCCCCChhHHHHHHHhcCCCCCCC-CccccccccceecCeecCCCcEEEechhhhc
Q 041279          328 NPEAMKKAQEEVTSVAKDKGFVDEDDIPRLEYINAVIKETMRIQPAAQ-FIPKATTERCVIDGYHIPAETMVLVNVWAIG  406 (505)
Q Consensus       328 ~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~-~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~  406 (505)
                      ||++|+|+++|++++.+.++.++.+++++||||+|||+||+|++|+++ .++|.+.+|++++|+.||||+.|.++++++|
T Consensus       326 ~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h  405 (514)
T PLN03112        326 NPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLG  405 (514)
T ss_pred             ChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhh
Confidence            999999999999999987777899999999999999999999999999 5789999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCC--C--CCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCC
Q 041279          407 RDPQVWDKPDKFIPERFVGSNID--M--GGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLD  482 (505)
Q Consensus       407 ~d~~~~~~p~~F~P~R~l~~~~~--~--~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~  482 (505)
                      |||++|+||++||||||+.++..  .  ......|+|||+|+|.|+|++||++|++++++.||++|+|++.++....++.
T Consensus       406 ~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~  485 (514)
T PLN03112        406 RNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDID  485 (514)
T ss_pred             CCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCC
Confidence            99999999999999998754211  1  1224679999999999999999999999999999999999987654333445


Q ss_pred             ccccCCccccCCCCeeEEeecCC
Q 041279          483 FEATPGLTQHKKKPLKLVATKSI  505 (505)
Q Consensus       483 ~~~~~~~~~~~~~~~~~~~~~~~  505 (505)
                      .....++++++++++.++++||.
T Consensus       486 ~~~~~~~~~~~~~~~~~~~~~r~  508 (514)
T PLN03112        486 TQEVYGMTMPKAKPLRAVATPRL  508 (514)
T ss_pred             CccccCcccccCCCeEEEeecCC
Confidence            55556777778889999999984


No 10 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=3.2e-77  Score=583.13  Aligned_cols=469  Identities=28%  Similarity=0.495  Sum_probs=356.1

Q ss_pred             hcCCCCCCCCCCCCccccccccCCCCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCCccc
Q 041279           25 KNTSAKFPPGPPGLPIIGNLHQFDATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPVLLG  104 (505)
Q Consensus        25 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~  104 (505)
                      ..++.+.||||+++|++|++..+.....+..+.+++++||+||+++++++++|+|+||+.+++++.++...|..++....
T Consensus        25 ~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~  104 (503)
T PLN02394         25 RGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVV  104 (503)
T ss_pred             hcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcch
Confidence            44677889999999999999877433356788999999999999999999999999999999999987777776654333


Q ss_pred             ccccccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHHHHHH
Q 041279          105 LQTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEIAMT  184 (505)
Q Consensus       105 ~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~~~  184 (505)
                      .......+.+.+++.+|+.|+++|+.+..++|++++++.+.+.+.++++++++.+.+....      .+..+++.+.+..
T Consensus       105 ~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~------~~~~v~~~~~~~~  178 (503)
T PLN02394        105 FDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEA------ATEGVVIRRRLQL  178 (503)
T ss_pred             HhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhc------cCCcEecHHHHHH
Confidence            2322222334567777999999999985699999999999999999999999998754321      2345899999999


Q ss_pred             HHHHHHHHHHhcccccCCChhHHHHHHHHHHHHHHhhccc--cccCccccchhhhhhhhhhHHHHHHHHHHHHHH-HHHH
Q 041279          185 CVRNIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLSGTI--FFSDCSFSFIGNCLDRITGMHRRLQNHFKDCDR-YYQQ  261 (505)
Q Consensus       185 ~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~  261 (505)
                      +++|+++.++||.+++..+......+..............  ....+ +|++.+.+.   ...+..........+ +...
T Consensus       179 ~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  254 (503)
T PLN02394        179 MMYNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDF-IPILRPFLR---GYLKICQDVKERRLALFKDY  254 (503)
T ss_pred             HHHHHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhh-chHHHHHhh---HHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987543222233333333222222111  11222 444332211   111112222221122 2233


Q ss_pred             HHHhhcCCCCc--ccccccCcHHHHHHhcccCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHH
Q 041279          262 LIDDHLDPKRP--QAARQQGDLIDDLLNLTKAGDLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQEEV  339 (505)
Q Consensus       262 ~i~~~~~~~~~--~~~~~~~d~~~~ll~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  339 (505)
                      .++++++....  .......|+++.|++..+++.++++++..++.++++||+|||+++++|++++|++||++|+||++||
T Consensus       255 ~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei  334 (503)
T PLN02394        255 FVDERKKLMSAKGMDKEGLKCAIDHILEAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDEL  334 (503)
T ss_pred             HHHHHHHHhhhccCCcchhhhHHHHHHhccccCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence            45544332110  0111226899999988766679999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCCCCCCCCCChhHHHHHHHhcCCCCCCC-CccccccccceecCeecCCCcEEEechhhhccCCCCCCCCCCC
Q 041279          340 TSVAKDKGFVDEDDIPRLEYINAVIKETMRIQPAAQ-FIPKATTERCVIDGYHIPAETMVLVNVWAIGRDPQVWDKPDKF  418 (505)
Q Consensus       340 ~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~-~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  418 (505)
                      +++.+.++.++.+++++||||+|||+||||++|+++ ..+|.+.+|++++||.||+||.|.++++.+||||++|+||++|
T Consensus       335 ~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F  414 (503)
T PLN02394        335 DTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEF  414 (503)
T ss_pred             HHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCcccc
Confidence            999987667888999999999999999999999999 5679999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCC--CCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccC-CccccCCC
Q 041279          419 IPERFVGSNID--MGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATP-GLTQHKKK  495 (505)
Q Consensus       419 ~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~  495 (505)
                      |||||++++.+  .......++|||+|+|.|+|++||++|+++++|.|+++|+|++.++.+  .+...... ++....+.
T Consensus       415 ~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~  492 (503)
T PLN02394        415 RPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS--KIDVSEKGGQFSLHIAK  492 (503)
T ss_pred             CccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC--cCccccccCceeeccCC
Confidence            99999975422  122356899999999999999999999999999999999999876642  12222233 25554556


Q ss_pred             CeeEEeecCC
Q 041279          496 PLKLVATKSI  505 (505)
Q Consensus       496 ~~~~~~~~~~  505 (505)
                      ++++++.||.
T Consensus       493 ~~~~~~~~r~  502 (503)
T PLN02394        493 HSTVVFKPRS  502 (503)
T ss_pred             CceEEeecCC
Confidence            9999999983


No 11 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.4e-76  Score=575.43  Aligned_cols=453  Identities=25%  Similarity=0.400  Sum_probs=354.4

Q ss_pred             hcCCCCCCCCCCCCccccccccCCCCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCCccc
Q 041279           25 KNTSAKFPPGPPGLPIIGNLHQFDATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPVLLG  104 (505)
Q Consensus        25 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~  104 (505)
                      ...+.+.+|||+++|++|+++.+ ..+++..+.+++++||++|++++++.++|+++||+++++++.++...|..++....
T Consensus        24 ~~~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~  102 (482)
T PTZ00404         24 KKIHKNELKGPIPIPILGNLHQL-GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPS  102 (482)
T ss_pred             hhccCCCCCCCCCCCeeccHhhh-cccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcce
Confidence            34567778999999999999887 45778899999999999999999999999999999999999987666766654433


Q ss_pred             ccccccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHHHHHH
Q 041279          105 LQTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEIAMT  184 (505)
Q Consensus       105 ~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~~~  184 (505)
                      ...... +.+ +++.+|+.|+++|+.+ .+.|++++++.+.+.+.+.+.++++.+.+...       .+..+|+.+.+.+
T Consensus       103 ~~~~~~-~~~-l~~~~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~-------~~~~vd~~~~~~~  172 (482)
T PTZ00404        103 IKHGTF-YHG-IVTSSGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIES-------SGETFEPRYYLTK  172 (482)
T ss_pred             eeeecc-CCc-eeccChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHh-------cCCccCHHHHHHH
Confidence            221111 233 4455799999999998 79999999999999999999999999876432       3456999999999


Q ss_pred             HHHHHHHHHHhcccccCCCh---hHHHHHHHHHHHHHHhhccccccCccccchhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 041279          185 CVRNIIFRVTFSKRFEDDGP---AAVNRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRITGMHRRLQNHFKDCDRYYQQ  261 (505)
Q Consensus       185 ~~~~~i~~~~fg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (505)
                      +++|+++.++||.+++..+.   +....+.......+........... ++++.+.+.   .......+..+.+.+++.+
T Consensus       173 ~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  248 (482)
T PTZ00404        173 FTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDV-IEITQPLYY---QYLEHTDKNFKKIKKFIKE  248 (482)
T ss_pred             HHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhh-hhHhhhhhH---HHHHHHHHHHHHHHHHHHH
Confidence            99999999999998865321   1113344444444333222111122 222221111   1112223455667777777


Q ss_pred             HHHhhcCCCCcccccccCcHHHHHHhcccCC-CCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHH
Q 041279          262 LIDDHLDPKRPQAARQQGDLIDDLLNLTKAG-DLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQEEVT  340 (505)
Q Consensus       262 ~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  340 (505)
                      .++++++..+.  .. ..|+++.|++...+. ..+.+++.+++..+++||+|||+++++|++++|++||++|+|+++|++
T Consensus       249 ~i~~~~~~~~~--~~-~~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~  325 (482)
T PTZ00404        249 KYHEHLKTIDP--EV-PRDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIK  325 (482)
T ss_pred             HHHHHHHccCC--CC-cccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHH
Confidence            77766543221  11 268999999865321 222345889999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCCCCCCCCChhHHHHHHHhcCCCCCCC-Ccccccccccee-cCeecCCCcEEEechhhhccCCCCCCCCCCC
Q 041279          341 SVAKDKGFVDEDDIPRLEYINAVIKETMRIQPAAQ-FIPKATTERCVI-DGYHIPAETMVLVNVWAIGRDPQVWDKPDKF  418 (505)
Q Consensus       341 ~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~-~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  418 (505)
                      +++++++.++.+++++||||+|||+||||++|+++ .++|.+.+|+++ +|+.||||+.|.++.+++||||++||||++|
T Consensus       326 ~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F  405 (482)
T PTZ00404        326 STVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQF  405 (482)
T ss_pred             HHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCcccc
Confidence            99987667899999999999999999999999999 579999999999 9999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCccccCCCCee
Q 041279          419 IPERFVGSNIDMGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLK  498 (505)
Q Consensus       419 ~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (505)
                      |||||+++.     .+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++..   .......++++. +.++.
T Consensus       406 ~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~-~~~~~  476 (482)
T PTZ00404        406 DPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKK---IDETEEYGLTLK-PNKFK  476 (482)
T ss_pred             CccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCC---CCcccccceeec-CCCce
Confidence            999999642     356899999999999999999999999999999999999876532   222223566666 45899


Q ss_pred             EEeecC
Q 041279          499 LVATKS  504 (505)
Q Consensus       499 ~~~~~~  504 (505)
                      |++++|
T Consensus       477 v~~~~R  482 (482)
T PTZ00404        477 VLLEKR  482 (482)
T ss_pred             eeeecC
Confidence            999987


No 12 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=7e-76  Score=573.65  Aligned_cols=462  Identities=25%  Similarity=0.455  Sum_probs=356.8

Q ss_pred             CCCCCCCCCCCCccccccccCC--CCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCCccc
Q 041279           27 TSAKFPPGPPGLPIIGNLHQFD--ATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPVLLG  104 (505)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~  104 (505)
                      +..++||||+++|++|++..+.  ..+++..+.+++++||++|++++++.++++|+||+++++++.++...|..++....
T Consensus        32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~  111 (519)
T PLN00168         32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS  111 (519)
T ss_pred             CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence            4567889999999999987653  23567789999999999999999999999999999999999998888887765332


Q ss_pred             ccccccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHHHHHH
Q 041279          105 LQTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEIAMT  184 (505)
Q Consensus       105 ~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~~~  184 (505)
                      ......+.....+..+|+.|+++||.+.+++|+.++++.+.+.+.++++++++.+.+...       .+..+|+.+.+..
T Consensus       112 ~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~-------~~~~v~~~~~~~~  184 (519)
T PLN00168        112 SRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAE-------DAAAPRVVETFQY  184 (519)
T ss_pred             hhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CCCCcCHHHHHHH
Confidence            222211111122235799999999866689999999999999999999999999976432       2346899999999


Q ss_pred             HHHHHHHHHHhcccccCCChhHHHHHHHHHHHHHHhh-ccccccCccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 041279          185 CVRNIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLS-GTIFFSDCSFSFIGNCLDRITGMHRRLQNHFKDCDRYYQQLI  263 (505)
Q Consensus       185 ~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  263 (505)
                      ++.++++.++||.+++..  .. ..+........... .......+ +|++.+.+.  ....++..+..+.+.+++..++
T Consensus       185 ~~~~ii~~~~fG~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~-~p~l~~~~~--~~~~~~~~~~~~~~~~~~~~~i  258 (519)
T PLN00168        185 AMFCLLVLMCFGERLDEP--AV-RAIAAAQRDWLLYVSKKMSVFAF-FPAVTKHLF--RGRLQKALALRRRQKELFVPLI  258 (519)
T ss_pred             HHHHHHHHHHcCCCcChh--hH-HHHHHHHHHHHHHhcCCCCHHHh-Ccchhhhhh--hhHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999987642  11 22323322222111 11112223 454321211  1123344556777788888888


Q ss_pred             HhhcCCCC---c-c--cc---cccCcHHHHHHhccc--C--CCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcH
Q 041279          264 DDHLDPKR---P-Q--AA---RQQGDLIDDLLNLTK--A--GDLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPE  330 (505)
Q Consensus       264 ~~~~~~~~---~-~--~~---~~~~d~~~~ll~~~~--~--~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~  330 (505)
                      +++++...   . +  ..   ....|+++.|++...  +  +.++++++..+++++++||+|||+++++|++++|++||+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~  338 (519)
T PLN00168        259 DARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPS  338 (519)
T ss_pred             HHHHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHH
Confidence            87654321   0 0  00   012589999997542  1  259999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCC-CCCCCCCCCCChhHHHHHHHhcCCCCCCC-CccccccccceecCeecCCCcEEEechhhhccC
Q 041279          331 AMKKAQEEVTSVAKDK-GFVDEDDIPRLEYINAVIKETMRIQPAAQ-FIPKATTERCVIDGYHIPAETMVLVNVWAIGRD  408 (505)
Q Consensus       331 ~~~~l~~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~EtlRl~~~~~-~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d  408 (505)
                      +|+|+++||+++.+.+ +.++.+++.+||||+|||+||||++|+++ .++|.+.+|++++||.||||+.|.++.+++|||
T Consensus       339 ~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d  418 (519)
T PLN00168        339 IQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRD  418 (519)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcC
Confidence            9999999999998753 56888999999999999999999999998 568999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCC-----CCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCc
Q 041279          409 PQVWDKPDKFIPERFVGSNID-----MGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDF  483 (505)
Q Consensus       409 ~~~~~~p~~F~P~R~l~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~  483 (505)
                      |++||||++|+||||++++..     ....+..|+|||+|+|.|+|++||++|+++++++||++|+|++.++.   +++.
T Consensus       419 ~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~  495 (519)
T PLN00168        419 EREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGD---EVDF  495 (519)
T ss_pred             ccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCC---cCCh
Confidence            999999999999999974211     11234679999999999999999999999999999999999987653   2233


Q ss_pred             cccCCccccCCCCeeEEeecC
Q 041279          484 EATPGLTQHKKKPLKLVATKS  504 (505)
Q Consensus       484 ~~~~~~~~~~~~~~~~~~~~~  504 (505)
                      ....+++..++.++.+++++|
T Consensus       496 ~~~~~~~~~~~~~~~~~~~~R  516 (519)
T PLN00168        496 AEKREFTTVMAKPLRARLVPR  516 (519)
T ss_pred             hhhceeEEeecCCcEEEEEec
Confidence            233455666777899999887


No 13 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2.7e-76  Score=567.13  Aligned_cols=454  Identities=25%  Similarity=0.436  Sum_probs=358.1

Q ss_pred             CCCCCCCCCCCccccccccCCCC--chhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCCcccc
Q 041279           28 SAKFPPGPPGLPIIGNLHQFDAT--NLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPVLLGL  105 (505)
Q Consensus        28 ~~~~ppgp~~~p~~G~~~~~~~~--~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~  105 (505)
                      +...||||.++|++|++.++...  ....++.++..+||++|+.+++|.++++++||+.+++|+.++...+...+.+...
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            56778999999999999988533  5667889999999999999999999999999999999997655455444443322


Q ss_pred             cccccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHHHHHHH
Q 041279          106 QTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEIAMTC  185 (505)
Q Consensus       106 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~~~~  185 (505)
                      .....| .|++++. |+.|+++|+.+ .+.|+.+.++.+...+.+.+..+...+.....        +..+|+++.+.++
T Consensus       113 ~~~~lG-~gll~~~-g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~--------~~~vd~~~~~~~~  181 (497)
T KOG0157|consen  113 LKPWLG-DGLLFSD-GEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAAS--------GEEVDLQDLLKRL  181 (497)
T ss_pred             HHHHhc-CccccCC-chHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc--------CCeEcHHHHHHHH
Confidence            222233 4666666 99999999988 79999999999999999999888887776432        2339999999999


Q ss_pred             HHHHHHHHHhcccc-cCCChhHHHHHHHHHHHHHHhhccccccCcccc-chhhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 041279          186 VRNIIFRVTFSKRF-EDDGPAAVNRLDYLLAETQLLSGTIFFSDCSFS-FIGNCLDRITGMHRRLQNHFKDCDRYYQQLI  263 (505)
Q Consensus       186 ~~~~i~~~~fg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  263 (505)
                      ++|+++.++||... +...+.. .++...+.........-   .. .| +.. ++..+ +..++..++.+.++++++++|
T Consensus       182 tld~i~~~~~G~~~~~~~~~~~-~~~~~a~~~~~~~~~~~---~~-~p~~~~-~~~~~-~~~~~~~~a~~~~~~~~~~iI  254 (497)
T KOG0157|consen  182 TLDIICKTAMGPESLDAEGPEL-FEYVQAFDDLTELISKR---IN-LPLGTK-FLYGL-KSERKLKKARKILHDFLEKII  254 (497)
T ss_pred             HHHHHHHHhcCCccccccCCcc-cHHHHHHHHHHHHHHHH---Hc-Cchhhh-HHhhc-chHHHHHHHHHHHHHHHHHHH
Confidence            99999999999222 2121121 34444444333332211   11 44 222 22222 256778889999999999999


Q ss_pred             HhhcCCCCccc---ccccCcHHHHHHhcccCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHH
Q 041279          264 DDHLDPKRPQA---ARQQGDLIDDLLNLTKAGDLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQEEVT  340 (505)
Q Consensus       264 ~~~~~~~~~~~---~~~~~d~~~~ll~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  340 (505)
                      +++++.....+   .....|+++.+....+ +.++++++.+++.+|++||+|||+++++|++++|+.||++|+|+++|++
T Consensus       255 ~~rr~~~~~~~~~~~~~~~d~L~~~~~~~~-~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~  333 (497)
T KOG0157|consen  255 RERREELEKEGSGEEKKRLDFLDTLLLEED-KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVD  333 (497)
T ss_pred             HHHHHHHHhcCCcccchhhhHHHHHHHhcc-CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            98886432211   1223678885333322 5899999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCC-CCCCCCCCChhHHHHHHHhcCCCCCCCCcccccccccee-cCeecCCCcEEEechhhhccCCCCCC-CCCC
Q 041279          341 SVAKDKGF-VDEDDIPRLEYINAVIKETMRIQPAAQFIPKATTERCVI-DGYHIPAETMVLVNVWAIGRDPQVWD-KPDK  417 (505)
Q Consensus       341 ~~~~~~~~-~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~~-~p~~  417 (505)
                      ++.+.+.. .+....++|+||++||+|||||||++|.+.|.+.+|+++ +||.||||+.|+++++++|||+.+|+ ||++
T Consensus       334 ~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~  413 (497)
T KOG0157|consen  334 EILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEE  413 (497)
T ss_pred             HHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhh
Confidence            99975432 222223369999999999999999999999999999999 58999999999999999999999996 9999


Q ss_pred             CCCCCCCCCCCCCCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCccccCCCCe
Q 041279          418 FIPERFVGSNIDMGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPL  497 (505)
Q Consensus       418 F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (505)
                      ||||||++++.....++++|+|||+|+|.|+|++||++|||++++++|++|+|++..+..     ......++++++.++
T Consensus       414 F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~gl  488 (497)
T KOG0157|consen  414 FDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-----PKPVPELTLRPKNGL  488 (497)
T ss_pred             cCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-----ceeeeEEEEEecCCe
Confidence            999999976433345678999999999999999999999999999999999999865521     445588999999999


Q ss_pred             eEEeecCC
Q 041279          498 KLVATKSI  505 (505)
Q Consensus       498 ~~~~~~~~  505 (505)
                      +|+++||.
T Consensus       489 ~v~~~~r~  496 (497)
T KOG0157|consen  489 KVKLRPRG  496 (497)
T ss_pred             EEEEEeCC
Confidence            99999984


No 14 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=4.7e-75  Score=560.71  Aligned_cols=456  Identities=26%  Similarity=0.417  Sum_probs=357.8

Q ss_pred             CCCCCCCccccccccCCCCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCCcccccccccC
Q 041279           32 PPGPPGLPIIGNLHQFDATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPVLLGLQTLSYN  111 (505)
Q Consensus        32 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  111 (505)
                      ||||+++|++||++++...+++..+.+|+++||++|+++++++++++|+||+.+++++.++...|..++.......+..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            68999999999998885556888999999999999999999999999999999999999988888777643333222211


Q ss_pred             ccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHHHHHHHHHHHHH
Q 041279          112 YLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEIAMTCVRNIIF  191 (505)
Q Consensus       112 ~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~i~  191 (505)
                      +.......+|+.|+++|+.+..++++...++.+.+.+.+.++.+++.+.+.....     .++++|+.+.+..+++++++
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~vd~~~~~~~~t~dvi~  155 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDD-----PHSPVNFRDVFENELFGLSL  155 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhcccc-----CCCceeHHHHHHHHHHHHHH
Confidence            2223344568999999998878889988889999999999999998886543310     24579999999999999999


Q ss_pred             HHHhcccccCCChh-HH------HHHHHHHHHHHHhhccccccCccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 041279          192 RVTFSKRFEDDGPA-AV------NRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRITGMHRRLQNHFKDCDRYYQQLID  264 (505)
Q Consensus       192 ~~~fg~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  264 (505)
                      .++||.++...+.+ ..      ..+...............+.++ +|++. +++. ....++..+....+.+++..+++
T Consensus       156 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~l~-~~~~-~~~~~~~~~~~~~~~~~~~~~i~  232 (466)
T PLN02655        156 IQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDF-FPYLS-WIPN-KSFETRVQTTEFRRTAVMKALIK  232 (466)
T ss_pred             HHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhh-hhhhh-hcCc-hhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999987653211 10      1122223333333222222233 55443 3321 11122233333344567777777


Q ss_pred             hhcCCCCcccccccCcHHHHHHhcccCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhc
Q 041279          265 DHLDPKRPQAARQQGDLIDDLLNLTKAGDLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQEEVTSVAK  344 (505)
Q Consensus       265 ~~~~~~~~~~~~~~~d~~~~ll~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  344 (505)
                      +++++...+.. + .|+++.+++...  .++++++.+++.++++||+|||+++++|++++|+.||++|+++++||+++.+
T Consensus       233 ~~~~~~~~~~~-~-~d~l~~ll~~~~--~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~  308 (466)
T PLN02655        233 QQKKRIARGEE-R-DCYLDFLLSEAT--HLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCG  308 (466)
T ss_pred             HHHHhhcCCCC-c-ccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhC
Confidence            66654322222 2 689999997653  5899999999999999999999999999999999999999999999999988


Q ss_pred             CCCCCCCCCCCCChhHHHHHHHhcCCCCCCC-CccccccccceecCeecCCCcEEEechhhhccCCCCCCCCCCCCCCCC
Q 041279          345 DKGFVDEDDIPRLEYINAVIKETMRIQPAAQ-FIPKATTERCVIDGYHIPAETMVLVNVWAIGRDPQVWDKPDKFIPERF  423 (505)
Q Consensus       345 ~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~-~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~  423 (505)
                      .+. ++.+++++||||+|||+||||++|+++ ..+|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||
T Consensus       309 ~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~  387 (466)
T PLN02655        309 DER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERF  387 (466)
T ss_pred             CCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCcccc
Confidence            654 899999999999999999999999999 557999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCccccCCCCeeEEeec
Q 041279          424 VGSNIDMGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVATK  503 (505)
Q Consensus       424 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (505)
                      ++++.. ......++|||+|+|.|+|++||..|+++++++||++|++++.++..    ......+++..+++++.|++++
T Consensus       388 ~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  462 (466)
T PLN02655        388 LGEKYE-SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE----EKEDTVQLTTQKLHPLHAHLKP  462 (466)
T ss_pred             CCCCcc-cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc----cccchhheeEeecCCcEEEEee
Confidence            975422 12346899999999999999999999999999999999999876532    1233457778888999999998


Q ss_pred             CC
Q 041279          504 SI  505 (505)
Q Consensus       504 ~~  505 (505)
                      |.
T Consensus       463 r~  464 (466)
T PLN02655        463 RG  464 (466)
T ss_pred             cC
Confidence            84


No 15 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.3e-75  Score=526.79  Aligned_cols=458  Identities=23%  Similarity=0.361  Sum_probs=378.6

Q ss_pred             CCCCCCCCCCCCcccccccc---CCCCchhHHHHHHHHhhCCeEEEe-ecCccEEEEcCHHHHHHHHHhcCccccCCC-C
Q 041279           27 TSAKFPPGPPGLPIIGNLHQ---FDATNLAFYLWKLSKQYGPIFSLR-LAFRPAIVISSVKLVKEAFKTHDLQFAGRP-V  101 (505)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~---~~~~~~~~~~~~~~~kyG~v~~~~-~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~-~  101 (505)
                      .+...+|||..+|++|.+..   ....+.++.....+++||+||+.. +|+...|.|.||++++.+|++++ .+..++ .
T Consensus        47 r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~  125 (519)
T KOG0159|consen   47 RPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLL  125 (519)
T ss_pred             CChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcccc
Confidence            34556799999999999873   324678889999999999999999 78899999999999999999988 445554 2


Q ss_pred             ccccccc--ccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccchH
Q 041279          102 LLGLQTL--SYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLS  179 (505)
Q Consensus       102 ~~~~~~~--~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~  179 (505)
                      ...+...  .++...+++..+|+.|.+.|..++..++++++++.|.+.+++.+++++..+....+.    +....+.|+.
T Consensus       126 ~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~----~~~~~~~D~~  201 (519)
T KOG0159|consen  126 IEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDP----ERGELVPDFA  201 (519)
T ss_pred             cchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcc----cccccchhHH
Confidence            2222111  133445567777999999999999999999999999999999999999999887652    2246689999


Q ss_pred             HHHHHHHHHHHHHHHhcccccCCChhH---HHHHHHHHHHHHHhhccccccCccccchhhhhhhhhhHHHHHHHHHHHHH
Q 041279          180 EIAMTCVRNIIFRVTFSKRFEDDGPAA---VNRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRITGMHRRLQNHFKDCD  256 (505)
Q Consensus       180 ~~~~~~~~~~i~~~~fg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~  256 (505)
                      +.+.+++++.||.++||.++++.....   ...+.+.+..++..+..+.   + .|.++++++  ++.++++.++++.+.
T Consensus       202 ~~l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~---~-~p~l~r~~~--t~~wk~~~~~~D~i~  275 (519)
T KOG0159|consen  202 QELYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLM---L-MPSLWRYFP--TKVWKDFVRAWDQIF  275 (519)
T ss_pred             HHHHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHH---h-cchHHHhCC--ChHHHHHHHHHHHHH
Confidence            999999999999999999999874321   2556666666666554432   2 554444554  456888889999999


Q ss_pred             HHHHHHHHhhcCCCCcccc---cccCcHHHHHHhcccCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHH
Q 041279          257 RYYQQLIDDHLDPKRPQAA---RQQGDLIDDLLNLTKAGDLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMK  333 (505)
Q Consensus       257 ~~~~~~i~~~~~~~~~~~~---~~~~d~~~~ll~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~  333 (505)
                      +++...|++..+..+.+..   +....+...|.+.    .++.+++..+++.+++||.|||+++++|+||.|++||++|+
T Consensus       276 ~~~~~~Id~~l~~l~~~~~~~~~~~~~l~~~L~~~----~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~  351 (519)
T KOG0159|consen  276 DVGDKYIDNALEELEKQDSAGSEYTGSLLELLLRK----ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQ  351 (519)
T ss_pred             HHHHHHHHHHHHHHHhccccccchhHHHHHHHHHc----cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHH
Confidence            9998888877654433221   1112333333333    68999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcC-CCCCCCCCCCCChhHHHHHHHhcCCCCCCCCccccccccceecCeecCCCcEEEechhhhccCCCCC
Q 041279          334 KAQEEVTSVAKD-KGFVDEDDIPRLEYINAVIKETMRIQPAAQFIPKATTERCVIDGYHIPAETMVLVNVWAIGRDPQVW  412 (505)
Q Consensus       334 ~l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~  412 (505)
                      +|++|+.++.+. +..++.+++.+||||.||||||+||||++++..|...+|.+++||.|||||.|.++++...+||+.|
T Consensus       352 ~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F  431 (519)
T KOG0159|consen  352 RLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYF  431 (519)
T ss_pred             HHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhC
Confidence            999999999987 6778899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCcccc
Q 041279          413 DKPDKFIPERFVGSNIDMGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQH  492 (505)
Q Consensus       413 ~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  492 (505)
                      ++|++|+|||||+++. ...++..++|||.|+|+|+||.+|++||.+++|+|+++|+++..+..     .......+++.
T Consensus       432 ~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~-----pv~~~~~~il~  505 (519)
T KOG0159|consen  432 PDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE-----PVEYVYRFILV  505 (519)
T ss_pred             CCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC-----CccceeEEEEc
Confidence            9999999999998753 34578999999999999999999999999999999999999987642     34555778889


Q ss_pred             CCCCeeEEeecCC
Q 041279          493 KKKPLKLVATKSI  505 (505)
Q Consensus       493 ~~~~~~~~~~~~~  505 (505)
                      |+.++.+++++|.
T Consensus       506 P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  506 PNRPLRFKFRPRN  518 (519)
T ss_pred             CCCCcceeeeeCC
Confidence            9999999999883


No 16 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=2.8e-75  Score=570.80  Aligned_cols=451  Identities=22%  Similarity=0.348  Sum_probs=349.6

Q ss_pred             CCCCCCCCCCCCccccccccCCC------------------CchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHH
Q 041279           27 TSAKFPPGPPGLPIIGNLHQFDA------------------TNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEA   88 (505)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~~~~------------------~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i   88 (505)
                      .....||||+++|++||++.+..                  .+....+.+|+++||++|++++++.++|+|+||++++++
T Consensus        39 ~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~i  118 (516)
T PLN02290         39 MERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKEL  118 (516)
T ss_pred             HHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHH
Confidence            45667899999999999877621                  122234678999999999999999999999999999999


Q ss_pred             HHhcCccccCCCCcccccccccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhccccccc
Q 041279           89 FKTHDLQFAGRPVLLGLQTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADE  168 (505)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~  168 (505)
                      +.++. .+..++...........+.+ ++..+|+.|+++|+.+ .+.|+.++++.+.+.+.++++++++.+.+..+.   
T Consensus       119 l~~~~-~~~~r~~~~~~~~~~~~g~~-l~~~~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~---  192 (516)
T PLN02290        119 LTKYN-TVTGKSWLQQQGTKHFIGRG-LLMANGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVES---  192 (516)
T ss_pred             HhcCC-CCCCCcchhhhHHHHHhcCC-ccccCchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence            99874 34444422111111111234 4455699999999998 699999999999999999999999999764321   


Q ss_pred             CCCCCcccchHHHHHHHHHHHHHHHHhcccccCCChhHHHHHHHHHHHHHHhhccccccCccccchhhhhhhhhhHHHHH
Q 041279          169 DGSSKVPINLSEIAMTCVRNIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRITGMHRRL  248 (505)
Q Consensus       169 ~~~~~~~v~l~~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~  248 (505)
                         ++..+|+.+++..+++++++.++||.++...     +++.+.+............... +|++. +++  .+..++.
T Consensus       193 ---~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~p~~~-~~p--~~~~~~~  260 (516)
T PLN02290        193 ---GQTEVEIGEYMTRLTADIISRTEFDSSYEKG-----KQIFHLLTVLQRLCAQATRHLC-FPGSR-FFP--SKYNREI  260 (516)
T ss_pred             ---CCceEEhHHHHHHHHHHHHHHHHcCCccccc-----hHHHHHHHHHHHHHHHhhhhhc-Cchhh-hCC--ChhHHHH
Confidence               2347899999999999999999999987543     2222222222222111111111 33322 222  1223445


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCccc-ccccCcHHHHHHhcccC-----CCCCHHHHHHHHHHHHHhcccchHHHHHHHH
Q 041279          249 QNHFKDCDRYYQQLIDDHLDPKRPQA-ARQQGDLIDDLLNLTKA-----GDLTLDDVKAAIMEIFIGATDTSKVTIEMAM  322 (505)
Q Consensus       249 ~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~d~~~~ll~~~~~-----~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l  322 (505)
                      ....+.+.+++.+.|+++++..+.+. .....|+++.+++...+     ..++++++.+++.++++||+|||+++++|++
T Consensus       261 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l  340 (516)
T PLN02290        261 KSLKGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTL  340 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            55667788888888887765432211 11227899999975431     1478999999999999999999999999999


Q ss_pred             HHHhhCcHHHHHHHHHHHHhhcCCCCCCCCCCCCChhHHHHHHHhcCCCCCCCCccccccccceecCeecCCCcEEEech
Q 041279          323 THLMKNPEAMKKAQEEVTSVAKDKGFVDEDDIPRLEYINAVIKETMRIQPAAQFIPKATTERCVIDGYHIPAETMVLVNV  402 (505)
Q Consensus       323 ~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~  402 (505)
                      ++|++||++|+|+++|++++++.+ .++.+++++||||+|||+||||++|+++.++|.+.+|++++|+.|||||.|.++.
T Consensus       341 ~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~  419 (516)
T PLN02290        341 MLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPV  419 (516)
T ss_pred             HHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecH
Confidence            999999999999999999998764 6889999999999999999999999999889999999999999999999999999


Q ss_pred             hhhccCCCCC-CCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCC
Q 041279          403 WAIGRDPQVW-DKPDKFIPERFVGSNIDMGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDL  481 (505)
Q Consensus       403 ~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~  481 (505)
                      +++||||++| +||++||||||++.+.   .....|+|||.|+|.|+|++||++|++++++.||++|++++.++..    
T Consensus       420 ~~~~rdp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~----  492 (516)
T PLN02290        420 LAIHHSEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR----  492 (516)
T ss_pred             HHhcCChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc----
Confidence            9999999999 8999999999995421   2345799999999999999999999999999999999999876521    


Q ss_pred             CccccCCccccCCCCeeEEeecC
Q 041279          482 DFEATPGLTQHKKKPLKLVATKS  504 (505)
Q Consensus       482 ~~~~~~~~~~~~~~~~~~~~~~~  504 (505)
                       .....++++.|+.+++|+++||
T Consensus       493 -~~~~~~~~~~p~~~~~~~~~~~  514 (516)
T PLN02290        493 -HAPVVVLTIKPKYGVQVCLKPL  514 (516)
T ss_pred             -cCccceeeecCCCCCeEEEEeC
Confidence             1222357889999999999988


No 17 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.6e-73  Score=553.67  Aligned_cols=463  Identities=25%  Similarity=0.431  Sum_probs=345.4

Q ss_pred             CCCCCCCCCCCccccccccCCCCch-hHHHHHHHHhh-CCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCCcccc
Q 041279           28 SAKFPPGPPGLPIIGNLHQFDATNL-AFYLWKLSKQY-GPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPVLLGL  105 (505)
Q Consensus        28 ~~~~ppgp~~~p~~G~~~~~~~~~~-~~~~~~~~~ky-G~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~  105 (505)
                      ..+.||||+++|++|+++.+....+ ..++.++.++| |+||+++++++++|+|+||+.+++++.++...|..++.....
T Consensus        38 ~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~  117 (534)
T PLN03018         38 SRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIM  117 (534)
T ss_pred             CCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhh
Confidence            4457899999999999988743222 23466666666 799999999999999999999999999988788887754443


Q ss_pred             cccccCccceecCCCchhHHHHHHHHhHhh-cChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHHHHHH
Q 041279          106 QTLSYNYLGVTFAPHYNEWRDMRKRFVTSL-LNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEIAMT  184 (505)
Q Consensus       106 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~~~  184 (505)
                      .....++.++.+...|+.|+++|+.+. +. ++......+.+....++.++++.+.+..+       .+.++|+.+.+..
T Consensus       118 ~~l~~~~~~i~~~~~G~~Wk~~Rk~l~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-------~~~~vd~~~~~~~  189 (534)
T PLN03018        118 ETIGDNYKSMGTSPYGEQFMKMKKVIT-TEIMSVKTLNMLEAARTIEADNLIAYIHSMYQ-------RSETVDVRELSRV  189 (534)
T ss_pred             hhhccCCCceEecCCCHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc-------cCCceeHHHHHHH
Confidence            333222234566666999999999985 55 45544555566666778899998875432       2456999999999


Q ss_pred             HHHHHHHHHHhcccccCCCh------hHHHHHHHHHHHHHHhhcc---ccccCcccc-chhhhhhhhhhHHHHHHHHHHH
Q 041279          185 CVRNIIFRVTFSKRFEDDGP------AAVNRLDYLLAETQLLSGT---IFFSDCSFS-FIGNCLDRITGMHRRLQNHFKD  254 (505)
Q Consensus       185 ~~~~~i~~~~fg~~~~~~~~------~~~~~~~~~~~~~~~~~~~---~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~  254 (505)
                      +++++++.++||.+++..+.      .....+.............   ....+. +| |+..+.  +.+...+.......
T Consensus       190 ~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~--~~~~~~~~~~~~~~  266 (534)
T PLN03018        190 YGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDY-VERWLRGWN--IDGQEERAKVNVNL  266 (534)
T ss_pred             HHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHH-hhhhhhhhc--ccchHHHHHHHHHH
Confidence            99999999999998754211      1101122222222221111   111111 22 222110  01223334445566


Q ss_pred             HHHHHHHHHHhhcCCCCcc-cccccCcHHHHHHhcccC-C--CCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcH
Q 041279          255 CDRYYQQLIDDHLDPKRPQ-AARQQGDLIDDLLNLTKA-G--DLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPE  330 (505)
Q Consensus       255 ~~~~~~~~i~~~~~~~~~~-~~~~~~d~~~~ll~~~~~-~--~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~  330 (505)
                      +.+++.++++++++..... ......|+++.+++..++ +  .++++++..++.++++||+|||+++++|++++|+.||+
T Consensus       267 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~  346 (534)
T PLN03018        267 VRSYNNPIIDERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPE  346 (534)
T ss_pred             HHHHHHHHHHHHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHH
Confidence            7788888888776432111 111126899999976543 2  38999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCCCCChhHHHHHHHhcCCCCCCC-CccccccccceecCeecCCCcEEEechhhhccCC
Q 041279          331 AMKKAQEEVTSVAKDKGFVDEDDIPRLEYINAVIKETMRIQPAAQ-FIPKATTERCVIDGYHIPAETMVLVNVWAIGRDP  409 (505)
Q Consensus       331 ~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~-~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~  409 (505)
                      +|+|+++||+++++.++.++.+++.+||||+|||+||||++|+++ ..+|.+.+|++++||.||||+.|.++.+++|+||
T Consensus       347 ~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp  426 (534)
T PLN03018        347 ILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNP  426 (534)
T ss_pred             HHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCc
Confidence            999999999999987777888999999999999999999999999 4579999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCC-----CCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCcc
Q 041279          410 QVWDKPDKFIPERFVGSNIDM-----GGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFE  484 (505)
Q Consensus       410 ~~~~~p~~F~P~R~l~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~  484 (505)
                      ++|+||++|+||||++++.+.     ...+..++|||+|+|.|+|++||.+|+++++|+|+++|+|++.++.  .+++..
T Consensus       427 ~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~  504 (534)
T PLN03018        427 KIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDF--GPLSLE  504 (534)
T ss_pred             ccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCC--CCCCcc
Confidence            999999999999999754221     1235689999999999999999999999999999999999986642  122332


Q ss_pred             ccCCccccCCCCeeEEeecC
Q 041279          485 ATPGLTQHKKKPLKLVATKS  504 (505)
Q Consensus       485 ~~~~~~~~~~~~~~~~~~~~  504 (505)
                      ...+++.. +.++.|+++||
T Consensus       505 ~~~~~~~~-p~~~~v~~~~R  523 (534)
T PLN03018        505 EDDASLLM-AKPLLLSVEPR  523 (534)
T ss_pred             ccccceec-CCCeEEEEEec
Confidence            33354554 46999999998


No 18 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.4e-74  Score=560.00  Aligned_cols=438  Identities=19%  Similarity=0.334  Sum_probs=332.3

Q ss_pred             cCCCCCCCCCCCCccccccccCC----CCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCC
Q 041279           26 NTSAKFPPGPPGLPIIGNLHQFD----ATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPV  101 (505)
Q Consensus        26 ~~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~  101 (505)
                      .++.+.||||+++|++||++.+.    ...++.++.+++++||++|+++++++++|+|+||+++++++.+++..|..+..
T Consensus        34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~  113 (490)
T PLN02500         34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP  113 (490)
T ss_pred             cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence            35567889999999999976442    13566778999999999999999999999999999999999987766643321


Q ss_pred             cccccccccCccceecCCCchhHHHHHHHHhHhhcChhHHHH-hHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHH
Q 041279          102 LLGLQTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQ-FRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSE  180 (505)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~  180 (505)
                      ... ... .+..+ ++..+|+.|+++|+.+ .+.|++.+++. +.+.+.+.+..+++.+.           .+..+|+.+
T Consensus       114 ~~~-~~~-~g~~~-~~~~~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~vd~~~  178 (490)
T PLN02500        114 RSI-GGI-LGKWS-MLVLVGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWK-----------ENSTFSAQD  178 (490)
T ss_pred             hHH-HHH-hCccc-ccccCCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhC-----------CCCCEEehH
Confidence            111 111 12223 3444699999999998 68899998876 46667777677666553           234689999


Q ss_pred             HHHHHHHHHHHHHHhcccccCCChhHHHHHHHHHHHHHHhhccccccCccccchhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 041279          181 IAMTCVRNIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRITGMHRRLQNHFKDCDRYYQ  260 (505)
Q Consensus       181 ~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (505)
                      .+..++++++++++||.+.+..  +. ..+.............   ....+|...         .++..+..+.+.+++.
T Consensus       179 ~~~~~~~~vi~~~~fg~~~~~~--~~-~~~~~~~~~~~~~~~~---~~~~~p~~~---------~~~~~~~~~~~~~~~~  243 (490)
T PLN02500        179 EAKKFTFNLMAKHIMSMDPGEE--ET-EQLKKEYVTFMKGVVS---APLNFPGTA---------YRKALKSRATILKFIE  243 (490)
T ss_pred             HHHHHHHHHHHHHHhCCCCCch--HH-HHHHHHHHHHHhhhhc---chhcCCCcc---------cHHHHHHHHHHHHHHH
Confidence            9999999999999999875432  11 2222222222221100   000022211         2233445666777777


Q ss_pred             HHHHhhcCCCCccc-ccccCcHHHHHHhcccCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHH
Q 041279          261 QLIDDHLDPKRPQA-ARQQGDLIDDLLNLTKAGDLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQEEV  339 (505)
Q Consensus       261 ~~i~~~~~~~~~~~-~~~~~d~~~~ll~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  339 (505)
                      +.++++++..+.+. .....|+++.+++.   ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+
T Consensus       244 ~~i~~~~~~~~~~~~~~~~~d~l~~ll~~---~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei  320 (490)
T PLN02500        244 RKMEERIEKLKEEDESVEEDDLLGWVLKH---SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEH  320 (490)
T ss_pred             HHHHHHHHhhhcccCCCCcchHHHHHHhc---cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHH
Confidence            78777665332211 11126899999874   258999999999999999999999999999999999999999999999


Q ss_pred             HHhhc-----CCCCCCCCCCCCChhHHHHHHHhcCCCCCCCCccccccccceecCeecCCCcEEEechhhhccCCCCCCC
Q 041279          340 TSVAK-----DKGFVDEDDIPRLEYINAVIKETMRIQPAAQFIPKATTERCVIDGYHIPAETMVLVNVWAIGRDPQVWDK  414 (505)
Q Consensus       340 ~~~~~-----~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~  414 (505)
                      +++.+     .++.++.+++.+||||+|||+||||++|+++.+.|.+.+|++++||.||||+.|+++.+++||||++|+|
T Consensus       321 ~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~d  400 (490)
T PLN02500        321 LEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQ  400 (490)
T ss_pred             HHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCC
Confidence            99864     2335788999999999999999999999999778999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCC------CCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCC
Q 041279          415 PDKFIPERFVGSNIDMG------GQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPG  488 (505)
Q Consensus       415 p~~F~P~R~l~~~~~~~------~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  488 (505)
                      |++||||||++++....      ..+..|+|||+|+|.|+|++||++|+++++|+||++|+|++.++..  .  .. .. 
T Consensus       401 P~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~--~--~~-~~-  474 (490)
T PLN02500        401 PQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQ--A--FA-FP-  474 (490)
T ss_pred             ccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCc--c--ee-cc-
Confidence            99999999997542211      2356899999999999999999999999999999999999866532  1  11 12 


Q ss_pred             ccccCCCCeeEEeec
Q 041279          489 LTQHKKKPLKLVATK  503 (505)
Q Consensus       489 ~~~~~~~~~~~~~~~  503 (505)
                      .+ .++.++.|++++
T Consensus       475 ~~-~~~~~l~~~~~~  488 (490)
T PLN02500        475 FV-DFPKGLPIRVRR  488 (490)
T ss_pred             cc-cCCCCceEEEEe
Confidence            22 334699999876


No 19 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.9e-73  Score=549.12  Aligned_cols=434  Identities=19%  Similarity=0.255  Sum_probs=337.2

Q ss_pred             hhhcCCCCCCCCCCCCccccccccCCCCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCCc
Q 041279           23 HRKNTSAKFPPGPPGLPIIGNLHQFDATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPVL  102 (505)
Q Consensus        23 ~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~  102 (505)
                      ....++.+.||||+++|++||++.+ ..+...++++++++||++|+++++++++++|+||+.+++++.++...|..+...
T Consensus        24 ~~~~~r~~~ppgp~~~P~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~  102 (463)
T PLN02774         24 EVRYSKKGLPPGTMGWPLFGETTEF-LKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQ  102 (463)
T ss_pred             hhccCCCCCCCCCCCCCchhhHHHH-HHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCH
Confidence            3344556778899999999998876 445566889999999999999999999999999999999998877665332211


Q ss_pred             ccccccccCccceecCCCchhHHHHHHHHhHhhcChhHHHH-hHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHHH
Q 041279          103 LGLQTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQ-FRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEI  181 (505)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~  181 (505)
                       ..... .+ .+.+++.+|+.|+.+|+.+ .+.|++..++. +.+.+.+.++++++.+.           .++++|+.+.
T Consensus       103 -~~~~~-lg-~~~~~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~v~~~~~  167 (463)
T PLN02774        103 -SMLDI-LG-TCNIAAVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWD-----------GLKTIDIQEK  167 (463)
T ss_pred             -HHHHH-hC-ccchhhcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhC-----------CCCCEEeeHH
Confidence             11111 22 2334455799999999998 68999998875 68888888888777653           1346899999


Q ss_pred             HHHHHHHHHHHHHhcccccCCChhHHHHHHHHHHHHHHhhccccccCccccchhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 041279          182 AMTCVRNIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRITGMHRRLQNHFKDCDRYYQQ  261 (505)
Q Consensus       182 ~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (505)
                      +..++.++++.++||......   . .++...   ..........    +|.   +++.  ...++..++.+.+.+++.+
T Consensus       168 ~~~~~~~~~~~~~~g~~~~~~---~-~~~~~~---~~~~~~~~~~----~~~---~lp~--~~~~~~~~~~~~~~~~~~~  231 (463)
T PLN02774        168 TKEMALLSALKQIAGTLSKPI---S-EEFKTE---FFKLVLGTLS----LPI---DLPG--TNYRSGVQARKNIVRMLRQ  231 (463)
T ss_pred             HHHHHHHHHHHHHcCCCChHH---H-HHHHHH---HHHHhccccc----CCc---CCCC--hhhhHHHHHHHHHHHHHHH
Confidence            999999999999999764321   1 222222   2222111110    221   1110  1123445567778888888


Q ss_pred             HHHhhcCCCCcccccccCcHHHHHHhcccCC-CCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHH
Q 041279          262 LIDDHLDPKRPQAARQQGDLIDDLLNLTKAG-DLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQEEVT  340 (505)
Q Consensus       262 ~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  340 (505)
                      .++++++...    . ..|+++.+++...++ .++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus       232 ~i~~r~~~~~----~-~~d~l~~ll~~~~~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~  306 (463)
T PLN02774        232 LIQERRASGE----T-HTDMLGYLMRKEGNRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHL  306 (463)
T ss_pred             HHHHHHhcCC----C-cccHHHHHHhCccCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            8888765321    1 278999999754332 589999999999999999999999999999999999999999999999


Q ss_pred             HhhcC---CCCCCCCCCCCChhHHHHHHHhcCCCCCCCCccccccccceecCeecCCCcEEEechhhhccCCCCCCCCCC
Q 041279          341 SVAKD---KGFVDEDDIPRLEYINAVIKETMRIQPAAQFIPKATTERCVIDGYHIPAETMVLVNVWAIGRDPQVWDKPDK  417 (505)
Q Consensus       341 ~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  417 (505)
                      ++.+.   ++.++.+++++||||+|||+||||++|+++.+.|.+.+|++++||.||||+.|+++.+.+||||++|+||++
T Consensus       307 ~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~  386 (463)
T PLN02774        307 AIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMT  386 (463)
T ss_pred             HHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhc
Confidence            99753   345788999999999999999999999999778999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCccccCCCCe
Q 041279          418 FIPERFVGSNIDMGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPL  497 (505)
Q Consensus       418 F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (505)
                      |+||||++++.+   ....|+|||+|+|.|||+++|.+|++++++.||++|+|++.++..   ..    ...++.|++++
T Consensus       387 F~PeRfl~~~~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~---~~----~~~~~~p~~g~  456 (463)
T PLN02774        387 FNPWRWLDKSLE---SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDK---LM----KFPRVEAPNGL  456 (463)
T ss_pred             cCchhcCCCCcC---CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCc---cc----cCCCCCCCCCc
Confidence            999999965321   123699999999999999999999999999999999999876531   11    11234467899


Q ss_pred             eEEeec
Q 041279          498 KLVATK  503 (505)
Q Consensus       498 ~~~~~~  503 (505)
                      +|+++|
T Consensus       457 ~~~~~~  462 (463)
T PLN02774        457 HIRVSP  462 (463)
T ss_pred             eEEeee
Confidence            998875


No 20 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=5.2e-73  Score=555.41  Aligned_cols=434  Identities=22%  Similarity=0.358  Sum_probs=331.1

Q ss_pred             CCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCCcccccccccCccceecCCCchhHHHHH
Q 041279           49 ATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPVLLGLQTLSYNYLGVTFAPHYNEWRDMR  128 (505)
Q Consensus        49 ~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R  128 (505)
                      .+.++..+.+++++|||||++++++.++++|+||+.+++|+.++...|..++.......  ..+.++ +..+|+.|+.+|
T Consensus       150 ~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~--~~g~~l-~~~dge~wr~rR  226 (633)
T PLN02738        150 GEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEF--VMGKGL-IPADGEIWRVRR  226 (633)
T ss_pred             CchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhh--ccCCce-ecCCcHHHHHHH
Confidence            45677889999999999999999999999999999999999987766665432111111  112343 455699999999


Q ss_pred             HHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHHHHHHHHHHHHHHHHhcccccCCChh--H
Q 041279          129 KRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEIAMTCVRNIIFRVTFSKRFEDDGPA--A  206 (505)
Q Consensus       129 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~i~~~~fg~~~~~~~~~--~  206 (505)
                      +.+ .+.|+.++++.+.+.+.+.++++++.+.+...       ++.++|+.+.+..+++|+|+.++||.+++....+  .
T Consensus       227 r~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~-------~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~  298 (633)
T PLN02738        227 RAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAAS-------DGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGI  298 (633)
T ss_pred             Hhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHH
Confidence            998 79999999999999999999999999976543       4668999999999999999999999998754222  1


Q ss_pred             HHHHHHHHHHHHHhhccccccCccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcC-------CCCcc-ccccc
Q 041279          207 VNRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRITGMHRRLQNHFKDCDRYYQQLIDDHLD-------PKRPQ-AARQQ  278 (505)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~-~~~~~  278 (505)
                      ...+...+.......    ...+ .+|..+.+..++...++..+..+.+.++...+++.+++       ..... ....+
T Consensus       299 ~~~~~~~~~~~~~~~----~~~~-~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~  373 (633)
T PLN02738        299 VEAVYTVLREAEDRS----VSPI-PVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERD  373 (633)
T ss_pred             HHHHHHHHHHHHHHh----hcch-hhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhccccccc
Confidence            122222222221110    1111 22222122112222233334444444555544443221       10000 01122


Q ss_pred             CcHHHHHHhcccCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCCCCCCCCCCCh
Q 041279          279 GDLIDDLLNLTKAGDLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQEEVTSVAKDKGFVDEDDIPRLE  358 (505)
Q Consensus       279 ~d~~~~ll~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp  358 (505)
                      .|+++.|++..  +.++++++.++++.+++||+|||+.+++|++++|++||++|+||++|+++++++ +.++.+++++||
T Consensus       374 ~dil~~Ll~~~--~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLP  450 (633)
T PLN02738        374 PSILHFLLASG--DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLK  450 (633)
T ss_pred             chHHHHHHHcC--CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCH
Confidence            68999998763  368999999999999999999999999999999999999999999999999874 567889999999


Q ss_pred             hHHHHHHHhcCCCCCCCCccccccccceecCeecCCCcEEEechhhhccCCCCCCCCCCCCCCCCCCCCC--CCCCCCcc
Q 041279          359 YINAVIKETMRIQPAAQFIPKATTERCVIDGYHIPAETMVLVNVWAIGRDPQVWDKPDKFIPERFVGSNI--DMGGQNFE  436 (505)
Q Consensus       359 ~l~a~i~EtlRl~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~--~~~~~~~~  436 (505)
                      ||+|||+|+||++|+++.+.|++.+|++++||.|||||.|.++.+.+||||++||||++|+||||+.++.  ........
T Consensus       451 YL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~  530 (633)
T PLN02738        451 YTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFS  530 (633)
T ss_pred             HHHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCc
Confidence            9999999999999999977799999999999999999999999999999999999999999999985321  11234568


Q ss_pred             cccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCccccCCCCeeEEeecCC
Q 041279          437 FIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVATKSI  505 (505)
Q Consensus       437 ~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (505)
                      ++|||.|+|.|+|++||++|+++++|.|+++|+|++.++..  +  .....+++..+++++.|++++|.
T Consensus       531 ~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~--~--~~~~~~~~~~p~~~l~v~l~~R~  595 (633)
T PLN02738        531 YLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP--P--VKMTTGATIHTTEGLKMTVTRRT  595 (633)
T ss_pred             eeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC--C--cccccceEEeeCCCcEEEEEECC
Confidence            99999999999999999999999999999999999876532  2  22234667888889999999984


No 21 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.5e-72  Score=545.17  Aligned_cols=449  Identities=18%  Similarity=0.291  Sum_probs=337.3

Q ss_pred             CCCCCCCCccccccccCCCC--chhHHHHHHHHhhCCeEE---EeecCccEEEEcCHHHHHHHHHhcCccccCCCCcccc
Q 041279           31 FPPGPPGLPIIGNLHQFDAT--NLAFYLWKLSKQYGPIFS---LRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPVLLGL  105 (505)
Q Consensus        31 ~ppgp~~~p~~G~~~~~~~~--~~~~~~~~~~~kyG~v~~---~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~  105 (505)
                      -.|||.++|++|++..+...  ....++.+...+||..++   .++++.++++|+||+.+++|+.++...|.+++.....
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~  111 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI  111 (500)
T ss_pred             CCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence            35788899999998766322  222333444445886665   5778999999999999999999877666655432221


Q ss_pred             cccccCccceecCCCchhHHHHHHHHhHhhcChhHHHH--hHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHHHHH
Q 041279          106 QTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQ--FRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEIAM  183 (505)
Q Consensus       106 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~~  183 (505)
                      ..  ..+.++++ .+|+.|+++|+.+ ++.|+...+..  +.+.+.+.++.+++.+.+...       .+..+|+.+.+.
T Consensus       112 ~~--~~g~gl~~-~~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-------~~~~vd~~~~~~  180 (500)
T PLN02169        112 FD--VLGEGILT-VDFELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAH-------ENIIIDLQDVFM  180 (500)
T ss_pred             HH--hhcCcccc-cCcHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCeEeHHHHHH
Confidence            11  12344444 4599999999998 79999987764  346666777888888865432       355799999999


Q ss_pred             HHHHHHHHHHHhcccccCCChh-HHHHHHHHHHHHHHhhccccccCccccchhh-hhhhh-hhHHHHHHHHHHHHHHHHH
Q 041279          184 TCVRNIIFRVTFSKRFEDDGPA-AVNRLDYLLAETQLLSGTIFFSDCSFSFIGN-CLDRI-TGMHRRLQNHFKDCDRYYQ  260 (505)
Q Consensus       184 ~~~~~~i~~~~fg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~~~~~-~~~~~~~~~~~~~~~~~~~  260 (505)
                      ++++|+|+.++||.+.+..+.. ....+............   ...+ .|++.. +..++ .+..++..+..+.+.+++.
T Consensus       181 ~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (500)
T PLN02169        181 RFMFDTSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIY---YRHF-KPVILWRLQNWIGIGLERKMRTALATVNRMFA  256 (500)
T ss_pred             HHHHHHHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHH---hHHh-ccHHHHHHHHHhCCchhhHHHHHHHHHHHHHH
Confidence            9999999999999987643211 10233333333222111   1111 343221 11122 1335667778888899999


Q ss_pred             HHHHhhcCCCCcc--cccccCcHHHHHHhcccC-----CCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHH
Q 041279          261 QLIDDHLDPKRPQ--AARQQGDLIDDLLNLTKA-----GDLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMK  333 (505)
Q Consensus       261 ~~i~~~~~~~~~~--~~~~~~d~~~~ll~~~~~-----~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~  333 (505)
                      +.|+++++.....  .+....|+++.+++...+     +.++++++.+++.++++||+|||+++++|++++|++||++|+
T Consensus       257 ~~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~  336 (500)
T PLN02169        257 KIISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMA  336 (500)
T ss_pred             HHHHHHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHH
Confidence            9998876532111  111126899999876432     147889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCCCCCCCCCCCChhHHHHHHHhcCCCCCCCCccccccccce-ecCeecCCCcEEEechhhhccCCCCC
Q 041279          334 KAQEEVTSVAKDKGFVDEDDIPRLEYINAVIKETMRIQPAAQFIPKATTERCV-IDGYHIPAETMVLVNVWAIGRDPQVW  412 (505)
Q Consensus       334 ~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~-~~g~~ip~G~~v~~~~~~~~~d~~~~  412 (505)
                      |+++||++++      +.+++.+||||+|||+||||++|++|...|.+.+|.+ ++|+.||||+.|.++.+++||||++|
T Consensus       337 kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w  410 (500)
T PLN02169        337 KIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVW  410 (500)
T ss_pred             HHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCcccc
Confidence            9999999874      5678999999999999999999999977788777755 59999999999999999999999999


Q ss_pred             -CCCCCCCCCCCCCCCCCCC-CCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCcc
Q 041279          413 -DKPDKFIPERFVGSNIDMG-GQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGLT  490 (505)
Q Consensus       413 -~~p~~F~P~R~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  490 (505)
                       +||++||||||++++.+.. ..+..|+|||+|+|.|+|++||++|+++++|.||++|+|++.++.   ++  ....+++
T Consensus       411 ~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~---~~--~~~~~~~  485 (500)
T PLN02169        411 GEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH---KI--EAIPSIL  485 (500)
T ss_pred             CCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC---Cc--ccccceE
Confidence             8999999999997643322 236789999999999999999999999999999999999987543   22  2345678


Q ss_pred             ccCCCCeeEEeecCC
Q 041279          491 QHKKKPLKLVATKSI  505 (505)
Q Consensus       491 ~~~~~~~~~~~~~~~  505 (505)
                      ++++.++.|+++||+
T Consensus       486 l~~~~gl~l~l~~~~  500 (500)
T PLN02169        486 LRMKHGLKVTVTKKI  500 (500)
T ss_pred             EecCCCEEEEEEeCC
Confidence            899999999999996


No 22 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.6e-72  Score=542.18  Aligned_cols=451  Identities=19%  Similarity=0.280  Sum_probs=349.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCccccccccCCCCchhHHHHHHHHhhCCeEEEeecCccEEEEcCH
Q 041279            3 LLVLGILFGLPIFLLFLLQKHRKNTSAKFPPGPPGLPIIGNLHQFDATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSV   82 (505)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp   82 (505)
                      ++++++++.++++..+..++....++.+.||||+++|++|+++.+...+++.++.+++++||++|+++++++++|+|+||
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p   87 (463)
T PLN02196          8 LTLFAGALFLCLLRFLAGFRRSSSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSP   87 (463)
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCH
Confidence            34444444444444444444444456777889988999999887646678888999999999999999999999999999


Q ss_pred             HHHHHHHHhcCccccCCCCcccccccccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhc
Q 041279           83 KLVKEAFKTHDLQFAGRPVLLGLQTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKL  162 (505)
Q Consensus        83 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~  162 (505)
                      +++++++.++...|.  +..........+ ...++..+|+.|+++|+.+ .+.|++++++.+.+.+.+.++++++.+.  
T Consensus        88 ~~~~~vl~~~~~~~~--~~~~~~~~~~~g-~~~l~~~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~~~~--  161 (463)
T PLN02196         88 EAAKFVLVTKSHLFK--PTFPASKERMLG-KQAIFFHQGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLNSWE--  161 (463)
T ss_pred             HHHHHHHhCCCCccc--ccCchHHHHHcC-cccccccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHcCC--
Confidence            999999998776553  222211111222 2344556799999999998 6899999999999999999988887652  


Q ss_pred             ccccccCCCCCcccchHHHHHHHHHHHHHHHHhcccccCCChhHHHHHHHHHHHHHHhhccccccCccccchhhhhhhhh
Q 041279          163 GDAADEDGSSKVPINLSEIAMTCVRNIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRIT  242 (505)
Q Consensus       163 ~~~~~~~~~~~~~v~l~~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~  242 (505)
                                +..+++.+++..+++++++.++||.+.....    ..+.+.........      .. +|+.   ++.  
T Consensus       162 ----------~~~v~~~~~~~~~~~~v~~~~~fG~~~~~~~----~~~~~~~~~~~~~~------~~-~~~~---~p~--  215 (463)
T PLN02196        162 ----------GTQINTYQEMKTYTFNVALLSIFGKDEVLYR----EDLKRCYYILEKGY------NS-MPIN---LPG--  215 (463)
T ss_pred             ----------CCeEEeHHHHHHHHHHHHHHHHcCCCCchHH----HHHHHHHHHHhcch------hc-cccc---CCC--
Confidence                      3358999999999999999999998753211    22222222111111      11 2221   110  


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccccCcHHHHHHhcccCCCCCHHHHHHHHHHHHHhcccchHHHHHHHH
Q 041279          243 GMHRRLQNHFKDCDRYYQQLIDDHLDPKRPQAARQQGDLIDDLLNLTKAGDLTLDDVKAAIMEIFIGATDTSKVTIEMAM  322 (505)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l  322 (505)
                      ...++..++.+.+.+++.+.+++++++..    . ..|+++.+++.  .++++++++..+++++++||+|||+++++|++
T Consensus       216 ~~~~~~~~a~~~~~~~~~~~i~~~~~~~~----~-~~d~l~~ll~~--~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l  288 (463)
T PLN02196        216 TLFHKSMKARKELAQILAKILSKRRQNGS----S-HNDLLGSFMGD--KEGLTDEQIADNIIGVIFAARDTTASVLTWIL  288 (463)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHhhcCC----C-cccHHHHHHhc--CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            11234456677788888888887765321    1 26899988864  23689999999999999999999999999999


Q ss_pred             HHHhhCcHHHHHHHHHHHHhhcC---CCCCCCCCCCCChhHHHHHHHhcCCCCCCCCccccccccceecCeecCCCcEEE
Q 041279          323 THLMKNPEAMKKAQEEVTSVAKD---KGFVDEDDIPRLEYINAVIKETMRIQPAAQFIPKATTERCVIDGYHIPAETMVL  399 (505)
Q Consensus       323 ~~L~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~~~g~~ip~G~~v~  399 (505)
                      ++|++||++|+++++|++++.+.   ++.++.+++++||||+|||+||||++|+++...|.+.+|++++||.||||+.|.
T Consensus       289 ~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~  368 (463)
T PLN02196        289 KYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVL  368 (463)
T ss_pred             HHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEE
Confidence            99999999999999999998763   345788899999999999999999999999777999999999999999999999


Q ss_pred             echhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCC
Q 041279          400 VNVWAIGRDPQVWDKPDKFIPERFVGSNIDMGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKID  479 (505)
Q Consensus       400 ~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~  479 (505)
                      ++.+++|+||++|+||++|+||||++..     .+..++|||+|+|.|+|+++|++|+++++|.|+++|+|++.++.  .
T Consensus       369 ~~~~~~~rd~~~~~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~--~  441 (463)
T PLN02196        369 PLFRNIHHSADIFSDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS--N  441 (463)
T ss_pred             eeHHHhcCCchhcCCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC--C
Confidence            9999999999999999999999999632     35689999999999999999999999999999999999986542  1


Q ss_pred             CCCccccCCccccCCCCeeEEeec
Q 041279          480 DLDFEATPGLTQHKKKPLKLVATK  503 (505)
Q Consensus       480 ~~~~~~~~~~~~~~~~~~~~~~~~  503 (505)
                        ...  ...+..|+.++.|+++.
T Consensus       442 --~~~--~~~~~~p~~~~~~~~~~  461 (463)
T PLN02196        442 --GIQ--YGPFALPQNGLPIALSR  461 (463)
T ss_pred             --ceE--EcccccCCCCceEEEec
Confidence              222  23345688888888764


No 23 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.7e-72  Score=550.68  Aligned_cols=450  Identities=21%  Similarity=0.336  Sum_probs=336.8

Q ss_pred             CCCCCCCccccccccCCCCchhHHHHHHHHhh---CCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCCccccccc
Q 041279           32 PPGPPGLPIIGNLHQFDATNLAFYLWKLSKQY---GPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPVLLGLQTL  108 (505)
Q Consensus        32 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~  108 (505)
                      +|||.++|++|+++.+.. + +..+.+|.++|   |++|+++++++++++++||+.+++|+.++...|............
T Consensus        32 ~pgp~~~p~~G~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~  109 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLK-N-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEV  109 (516)
T ss_pred             cCCCCCCCeecchHHHHh-c-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHH
Confidence            689999999999876532 2 23466777777   899999999999999999999999998765455443321111111


Q ss_pred             ccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhH-HHHHHHHHHHHHhcccccccCCCCCcccchHHHHHHHHH
Q 041279          109 SYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVR-KDEIFRMVEKISKLGDAADEDGSSKVPINLSEIAMTCVR  187 (505)
Q Consensus       109 ~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~~~~~~  187 (505)
                       ..+.+ +++.+|+.|+++|+.+ ++.|+.++++.+.+.+ .+.++.+++.+.+...       .+.++|+.+++..+++
T Consensus       110 -~~g~~-l~~~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~-------~~~~vd~~~~~~~~~~  179 (516)
T PLN03195        110 -LLGDG-IFNVDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASF-------ANQVVDMQDLFMRMTL  179 (516)
T ss_pred             -HhcCe-eeccCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCeEcHHHHHHHHHH
Confidence             11233 4556799999999998 7999999999998876 5556777777764322       3457999999999999


Q ss_pred             HHHHHHHhcccccCCChhH-HHHHHHHHHHHHHhhccccccCccccc--hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 041279          188 NIIFRVTFSKRFEDDGPAA-VNRLDYLLAETQLLSGTIFFSDCSFSF--IGNCLDRITGMHRRLQNHFKDCDRYYQQLID  264 (505)
Q Consensus       188 ~~i~~~~fg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  264 (505)
                      |+++.++||.+++..+++. ...+.+.+........ ...  . .|+  +.+++.  ....++..+..+.+.+++.+.++
T Consensus       180 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~-~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~  253 (516)
T PLN03195        180 DSICKVGFGVEIGTLSPSLPENPFAQAFDTANIIVT-LRF--I-DPLWKLKKFLN--IGSEALLSKSIKVVDDFTYSVIR  253 (516)
T ss_pred             HHHHHHHhCCCccccccCCCccHHHHHHHHHHHHHH-HHH--h-cchhhHHHhcc--cchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999887643211 0223333332222110 000  0 121  111111  11123344566677778888887


Q ss_pred             hhcCCCCcc---cccccCcHHHHHHhcccC--CCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHH
Q 041279          265 DHLDPKRPQ---AARQQGDLIDDLLNLTKA--GDLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQEEV  339 (505)
Q Consensus       265 ~~~~~~~~~---~~~~~~d~~~~ll~~~~~--~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  339 (505)
                      +++++...+   ......|+++.+++..++  +.++++++.++++++++||+|||+++++|++++|++||++|+|+++|+
T Consensus       254 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei  333 (516)
T PLN03195        254 RRKAEMDEARKSGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSEL  333 (516)
T ss_pred             HHHHHHhccccccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            765432110   111126899999976543  368999999999999999999999999999999999999999999999


Q ss_pred             HHhhcC--------------------CCCCCCCCCCCChhHHHHHHHhcCCCCCCCCcccccccccee-cCeecCCCcEE
Q 041279          340 TSVAKD--------------------KGFVDEDDIPRLEYINAVIKETMRIQPAAQFIPKATTERCVI-DGYHIPAETMV  398 (505)
Q Consensus       340 ~~~~~~--------------------~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~~-~g~~ip~G~~v  398 (505)
                      +++.+.                    ++.++++++.+||||+|||+||||++|+++...|.+.+|.++ +|+.||||+.|
T Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V  413 (516)
T PLN03195        334 KALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMV  413 (516)
T ss_pred             HHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEE
Confidence            987642                    234788899999999999999999999999777878777665 99999999999


Q ss_pred             EechhhhccCCCCC-CCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCC
Q 041279          399 LVNVWAIGRDPQVW-DKPDKFIPERFVGSNIDMGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMK  477 (505)
Q Consensus       399 ~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~  477 (505)
                      .++.+++||||++| +||++|+||||++++......+..|+|||+|+|.|+|++||++|+++++|.|+++|++++.++. 
T Consensus       414 ~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~-  492 (516)
T PLN03195        414 TYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH-  492 (516)
T ss_pred             EEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC-
Confidence            99999999999999 9999999999996432112345679999999999999999999999999999999999986543 


Q ss_pred             CCCCCccccCCccccCCCCeeEEeecC
Q 041279          478 IDDLDFEATPGLTQHKKKPLKLVATKS  504 (505)
Q Consensus       478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (505)
                        +..  .....+..++.++.|+++||
T Consensus       493 --~~~--~~~~~~~~~~~~~~v~~~~r  515 (516)
T PLN03195        493 --PVK--YRMMTILSMANGLKVTVSRR  515 (516)
T ss_pred             --cce--eeeeeEEecCCCEEEEEEeC
Confidence              222  23345677888999999998


No 24 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=2.7e-73  Score=556.26  Aligned_cols=452  Identities=30%  Similarity=0.528  Sum_probs=358.6

Q ss_pred             CCCCCCCccccccccCC-CCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCCcccccc--c
Q 041279           32 PPGPPGLPIIGNLHQFD-ATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPVLLGLQT--L  108 (505)
Q Consensus        32 ppgp~~~p~~G~~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~--~  108 (505)
                      ||||+++|++||++.+. .++++.++.+++++||+||+++++++++++|+||+.+++|+.++...+..++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999999885 36788889999999999999999999999999999999999998766655433222221  1


Q ss_pred             ccCccceecCCCchhHHHHHHHHhHhhcChh-HHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHHHHHHHHH
Q 041279          109 SYNYLGVTFAPHYNEWRDMRKRFVTSLLNSN-RIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEIAMTCVR  187 (505)
Q Consensus       109 ~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~~~~~~  187 (505)
                      ...+.+ ++..+|+.|+.+|+.+ .+.|+.. .+ .+.+.+.+.++++++.+.+...       .+..+|+.+++..+++
T Consensus        81 ~~~~~~-l~~~~~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~-------~~~~vd~~~~~~~~~~  150 (463)
T PF00067_consen   81 PFGGKG-LFFSDGERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAEELIDQLRKKAG-------SSGPVDLFDWLRRFAL  150 (463)
T ss_dssp             HHTTTS-STTSSHHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTT-------SESEEEHHHHHHHHHH
T ss_pred             cccccc-cccccccccccccccc-cccccccccc-cccccccccccccccccccccc-------ccceeeeecccccccc
Confidence            122234 4445589999999998 6778877 66 9999999999999999988664       3347999999999999


Q ss_pred             HHHHHHHhcccccCCChhHHHHHHHHHHHHHHhhccc--cccCccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 041279          188 NIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLSGTI--FFSDCSFSFIGNCLDRITGMHRRLQNHFKDCDRYYQQLIDD  265 (505)
Q Consensus       188 ~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  265 (505)
                      ++++.++||.+++..+......+.+............  ..... +|++. +++  ....++..+..+.+.+++.+.+++
T Consensus       151 d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~-~~~--~~~~~~~~~~~~~~~~~~~~~i~~  226 (463)
T PF00067_consen  151 DVIGRVLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFF-FPWLK-YLP--TPLFRRFKRARDRLRKYIKEIIEE  226 (463)
T ss_dssp             HHHHHHHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHH-HHHHC-TSS--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccceeeecccccccccccccccccccccccccccccc-ccccc-ccc--cccccccccccccccccccccccc
Confidence            9999999999988554332245556665555433221  11112 44332 221  133555666778888888889888


Q ss_pred             hcCCCCcccccccCcHHHHHHhcc--cCC--CCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q 041279          266 HLDPKRPQAARQQGDLIDDLLNLT--KAG--DLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQEEVTS  341 (505)
Q Consensus       266 ~~~~~~~~~~~~~~d~~~~ll~~~--~~~--~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  341 (505)
                      +++....+.. ...|+++.+++..  .++  .++++++..+++.+++||++||+.+++|++++|++||++|+++++||++
T Consensus       227 ~~~~~~~~~~-~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~  305 (463)
T PF00067_consen  227 RREELDDGDE-SRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDS  305 (463)
T ss_dssp             HHHSHHSSSS-SCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred             cccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            8776544311 2279999999886  222  6899999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCCCCCCCCChhHHHHHHHhcCCCCCCC-CccccccccceecCeecCCCcEEEechhhhccCCCCCCCCCCCCC
Q 041279          342 VAKDKGFVDEDDIPRLEYINAVIKETMRIQPAAQ-FIPKATTERCVIDGYHIPAETMVLVNVWAIGRDPQVWDKPDKFIP  420 (505)
Q Consensus       342 ~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~-~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  420 (505)
                      +.+.++.++.+++++||||+|||+||||++|+++ .++|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|
T Consensus       306 ~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P  385 (463)
T PF00067_consen  306 VLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDP  385 (463)
T ss_dssp             HTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--T
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9976667888999999999999999999999999 889999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCccccCCCCeeEE
Q 041279          421 ERFVGSNIDMGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV  500 (505)
Q Consensus       421 ~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (505)
                      |||++.+.........|+|||+|+|.|+|++||++|+++++|.||++|||++.++...  .......+++.++ .++.|.
T Consensus       386 ~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~  462 (463)
T PF00067_consen  386 ERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEP--EPQEQQNGFLLPP-KPLKVK  462 (463)
T ss_dssp             TGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSG--GEEECSCSSSEEE-SSSEEE
T ss_pred             ccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCC--CCccccCceEeeC-CCcEEe
Confidence            9999886522356789999999999999999999999999999999999999665321  1122222444444 466665


Q ss_pred             e
Q 041279          501 A  501 (505)
Q Consensus       501 ~  501 (505)
                      +
T Consensus       463 ~  463 (463)
T PF00067_consen  463 F  463 (463)
T ss_dssp             E
T ss_pred             C
Confidence            3


No 25 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.2e-71  Score=486.55  Aligned_cols=442  Identities=20%  Similarity=0.321  Sum_probs=349.2

Q ss_pred             CCCC-CCCCCccccccccCCCCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCCccccccc
Q 041279           30 KFPP-GPPGLPIIGNLHQFDATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPVLLGLQTL  108 (505)
Q Consensus        30 ~~pp-gp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~  108 (505)
                      ..|| .-.++||+|++..| +.++..++++.++|||+||++.++|+.+.++.||+....++.++...++...........
T Consensus        31 ~~PPli~gwiP~lG~a~~f-gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~  109 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAF-GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTP  109 (486)
T ss_pred             CCCcccccCcchhhHHHHh-ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhh
Confidence            3444 44579999999999 889999999999999999999999999999999999999998874333322222112222


Q ss_pred             ccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHH-HHhcccccccCCCCCcccchHHHHHHHHH
Q 041279          109 SYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEK-ISKLGDAADEDGSSKVPINLSEIAMTCVR  187 (505)
Q Consensus       109 ~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~v~l~~~~~~~~~  187 (505)
                      .+ +.+++....+....++.+.+ ...+...+++++.+.|.+++.+.+.. +.+          ++....+..+...+++
T Consensus       110 vF-g~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~----------s~~~d~l~~~~~~ii~  177 (486)
T KOG0684|consen  110 VF-GKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE----------SGETDGLYTFCRLIIF  177 (486)
T ss_pred             hc-CCCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc----------ccchhHhhhhhHHHhh
Confidence            22 34455555566777777777 67789999999999999999888776 222          3556667888888888


Q ss_pred             HHHHHHHhcccccCCChhHHHHHHHHHHHHHHhhccccccCcccc-chhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 041279          188 NIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLSGTIFFSDCSFS-FIGNCLDRITGMHRRLQNHFKDCDRYYQQLIDDH  266 (505)
Q Consensus       188 ~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  266 (505)
                      .+.-.+.+|+.....+.+.    .....+....+.   ..+..|| ++. +    + ..++..++.+.+.+.+...|.++
T Consensus       178 tAs~~ll~~e~r~~~d~~~----a~l~~dLd~~F~---~~d~~FP~~LP-~----~-~~r~~~ra~~~i~k~f~~~i~~r  244 (486)
T KOG0684|consen  178 TASRLLLGGEVRDQLDADV----AKLYHDLDQGFQ---PFDFLFPYNLP-I----P-LLRRRDRARKKISKIFSKIILDR  244 (486)
T ss_pred             hhHHHhhhhhhhhhhcchH----HHHHHHHhcccc---chHhhcccCCC-c----c-hhhhHHHHHHHHHHHHHHHHHHH
Confidence            8888888888777654332    222222222111   1111145 222 1    1 13334477888888888888888


Q ss_pred             cCCCCcccccccCcHHHHHHhcccCC-CCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcC
Q 041279          267 LDPKRPQAARQQGDLIDDLLNLTKAG-DLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQEEVTSVAKD  345 (505)
Q Consensus       267 ~~~~~~~~~~~~~d~~~~ll~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  345 (505)
                      ++....    ..+|+++.+++..+++ ..+++|+...++.+++||+.|++.+.+|++++|++|||+++.+++|++++++.
T Consensus       245 r~s~s~----~~~dmlq~l~~~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~  320 (486)
T KOG0684|consen  245 RASISK----WDNDMLQSLMEKYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGE  320 (486)
T ss_pred             Hhcccc----ccHHHHHHHHHHhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhc
Confidence            876432    1178999999855544 78999999999999999999999999999999999999999999999999987


Q ss_pred             CCC-CCCCCCCCChhHHHHHHHhcCCCCCCCCccccccccceecC----eecCCCcEEEechhhhccCCCCCCCCCCCCC
Q 041279          346 KGF-VDEDDIPRLEYINAVIKETMRIQPAAQFIPKATTERCVIDG----YHIPAETMVLVNVWAIGRDPQVWDKPDKFIP  420 (505)
Q Consensus       346 ~~~-~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~~~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  420 (505)
                      +.. ++++++++||+|++||+|||||+||.+.+.|.+.+|+++.+    |.||+|..|.++++.+|+||++|+||+.|+|
T Consensus       321 ~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~  400 (486)
T KOG0684|consen  321 KKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKP  400 (486)
T ss_pred             cCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCCh
Confidence            655 99999999999999999999999999988899999999865    9999999999999999999999999999999


Q ss_pred             CCCCCCCCCCC--C--CCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCccccCCCC
Q 041279          421 ERFVGSNIDMG--G--QNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKP  496 (505)
Q Consensus       421 ~R~l~~~~~~~--~--~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (505)
                      |||++++++..  +  -.++++|||+|.|.|||+.||.+|+|.++..+|+.||+++.++ ...++++...   ++-|..+
T Consensus       401 dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~d~s~~---v~~P~g~  476 (486)
T KOG0684|consen  401 DRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEVDYSRM---VMQPEGD  476 (486)
T ss_pred             hhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCCCHHHh---hcCCCCC
Confidence            99998765431  1  2346799999999999999999999999999999999999987 3344555444   7788899


Q ss_pred             eeEEeecCC
Q 041279          497 LKLVATKSI  505 (505)
Q Consensus       497 ~~~~~~~~~  505 (505)
                      |+||.+.|.
T Consensus       477 v~irYK~R~  485 (486)
T KOG0684|consen  477 VRIRYKRRP  485 (486)
T ss_pred             ceEEEeecC
Confidence            999999884


No 26 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=7.2e-71  Score=528.21  Aligned_cols=462  Identities=18%  Similarity=0.229  Sum_probs=344.3

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCccccccccCC----CCchhHHHHHHHHhhCCeEEEeecCccE
Q 041279            1 MALLVLGILFGLPIFLLFLLQKHRKNTSAKFPPGPPGLPIIGNLHQFD----ATNLAFYLWKLSKQYGPIFSLRLAFRPA   76 (505)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~   76 (505)
                      |++.....+++++..+..++..+.+..+.++||||.++|++|+++.+.    ..++..++.+++++||++|+++++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~   80 (472)
T PLN02987          1 MAFSAFLLLLSSLAAIFFLLLRRTRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPT   80 (472)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhhccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCe
Confidence            444444444444444444444444556677889999999999998763    2457778899999999999999999999


Q ss_pred             EEEcCHHHHHHHHHhcCccccCCCCcccccccccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHH
Q 041279           77 IVISSVKLVKEAFKTHDLQFAGRPVLLGLQTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMV  156 (505)
Q Consensus        77 vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~  156 (505)
                      ++|+||+++++++.++...|..+...... .. .++.++++ .+|+.|+++|+.+ .+.++.+.++.+.   ..++.+++
T Consensus        81 vvv~~pe~~~~il~~~~~~f~~~~~~~~~-~~-lg~~~l~~-~~g~~wr~~R~~~-~~f~~~~~~~~~~---~~~~~~~~  153 (472)
T PLN02987         81 VFSADPETNRFILQNEGKLFECSYPGSIS-NL-LGKHSLLL-MKGNLHKKMHSLT-MSFANSSIIKDHL---LLDIDRLI  153 (472)
T ss_pred             EEEeCHHHHHHHHhCCCceEEecCcHHHH-HH-hCcccccc-cCcHHHHHHHHHH-HHhcChHHHHHHH---HHHHHHHH
Confidence            99999999999999887777544321111 11 22234444 4699999999987 4544544554432   22233333


Q ss_pred             HHHHhcccccccCCCCCcccchHHHHHHHHHHHHHHHHhcccccCCChhHHHHHHHHHHHHHHhhccccccCccccchhh
Q 041279          157 EKISKLGDAADEDGSSKVPINLSEIAMTCVRNIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLSGTIFFSDCSFSFIGN  236 (505)
Q Consensus       157 ~~l~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~  236 (505)
                      +.....   +      ..++++.+.+.+++++++++++||.+.....    +.+...+.....   .+ .... +|++. 
T Consensus       154 ~~~~~~---~------~~~v~~~~~~~~~t~~vi~~~~fg~~~~~~~----~~~~~~~~~~~~---~~-~~~~-~p~l~-  214 (472)
T PLN02987        154 RFNLDS---W------SSRVLLMEEAKKITFELTVKQLMSFDPGEWT----ESLRKEYVLVIE---GF-FSVP-LPLFS-  214 (472)
T ss_pred             HHHHHh---h------ccceehHHHHHHHHHHHHHHHHcCCCChHHH----HHHHHHHHHHHh---hh-hcCC-CcCCC-
Confidence            322111   0      1258999999999999999999997654211    222222221111   11 1111 44321 


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccccCcHHHHHHhcccCCCCCHHHHHHHHHHHHHhcccchHH
Q 041279          237 CLDRITGMHRRLQNHFKDCDRYYQQLIDDHLDPKRPQAARQQGDLIDDLLNLTKAGDLTLDDVKAAIMEIFIGATDTSKV  316 (505)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~  316 (505)
                            ...++..+..+.+.+++.+.++++++....+.. ...|+++.+++...  +++++++..+++++++||+|||+.
T Consensus       215 ------~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~-~~~d~l~~ll~~~~--~~~~~ei~~~~~~l~~Ag~~tta~  285 (472)
T PLN02987        215 ------TTYRRAIQARTKVAEALTLVVMKRRKEEEEGAE-KKKDMLAALLASDD--GFSDEEIVDFLVALLVAGYETTST  285 (472)
T ss_pred             ------chHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-ccccHHHHHHhcCC--CCCHHHHHHHHHHHHHhccchHHH
Confidence                  124555667788888888899887664332211 22789999997643  689999999999999999999999


Q ss_pred             HHHHHHHHHhhCcHHHHHHHHHHHHhhcC---CCCCCCCCCCCChhHHHHHHHhcCCCCCCCCccccccccceecCeecC
Q 041279          317 TIEMAMTHLMKNPEAMKKAQEEVTSVAKD---KGFVDEDDIPRLEYINAVIKETMRIQPAAQFIPKATTERCVIDGYHIP  393 (505)
Q Consensus       317 ~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~~~g~~ip  393 (505)
                      +++|++++|+.||++|+++++|++++.+.   ++.++.+++.+||||+||++||||++|+++.+.|.+.+|++++||.||
T Consensus       286 ~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip  365 (472)
T PLN02987        286 IMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIP  365 (472)
T ss_pred             HHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEEC
Confidence            99999999999999999999999998752   345778889999999999999999999999888999999999999999


Q ss_pred             CCcEEEechhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecC
Q 041279          394 AETMVLVNVWAIGRDPQVWDKPDKFIPERFVGSNIDMGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMP  473 (505)
Q Consensus       394 ~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~  473 (505)
                      ||+.|.++.+.+|+||++|+||++||||||++++.. ...+..++|||+|+|.|+|++||.+|++++++.|+++|+|+++
T Consensus       366 ~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~  444 (472)
T PLN02987        366 KGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPA  444 (472)
T ss_pred             CCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEEC
Confidence            999999999999999999999999999999975322 2234679999999999999999999999999999999999987


Q ss_pred             CCCCCCCCCccccCCccccCCCCeeEEeecCC
Q 041279          474 HGMKIDDLDFEATPGLTQHKKKPLKLVATKSI  505 (505)
Q Consensus       474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (505)
                      ++.   +..    ...++.|.+++.+++++|+
T Consensus       445 ~~~---~~~----~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        445 EQD---KLV----FFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             CCC---cee----ecccccCCCCceEEEEecc
Confidence            653   222    2348888889999999984


No 27 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=4.6e-71  Score=531.44  Aligned_cols=435  Identities=20%  Similarity=0.275  Sum_probs=336.0

Q ss_pred             cCCCCCCCCCCCCccccccccCC----CCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCC
Q 041279           26 NTSAKFPPGPPGLPIIGNLHQFD----ATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPV  101 (505)
Q Consensus        26 ~~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~  101 (505)
                      .++.+.||||.++|++|+++.+.    ..+++.++.++.++||+||++++++++++||+||++++++|.++...|..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            35677889999999999988763    24577889999999999999999999999999999999999988877764421


Q ss_pred             cccccccccCccceecCCCchhHHHHHHHHhHhhcChhHHHH-hHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHH
Q 041279          102 LLGLQTLSYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQ-FRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSE  180 (505)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~  180 (505)
                      . ..... .+ .+.++..+|+.|+++|+.+ .+.|+..++.. +.+.+.+.++++++.+.           .+..+++.+
T Consensus        83 ~-~~~~l-~g-~~~~~~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~  147 (452)
T PLN03141         83 K-SLTEL-MG-KSSILLINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWR-----------DDPPVLVQD  147 (452)
T ss_pred             h-hHHHH-hC-cccccccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhcc-----------CCCCEEhHH
Confidence            1 11111 22 2334555699999999988 67888777755 34455555555554432           245689999


Q ss_pred             HHHHHHHHHHHHHHhcccccCCChhHHHHHHHHHHHHHHhhccccccCccccchhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 041279          181 IAMTCVRNIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRITGMHRRLQNHFKDCDRYYQ  260 (505)
Q Consensus       181 ~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (505)
                      .+..+++++++.++||.+.+.   +. .++...+.........       +|+   +++.  ....+..++.+.+.+++.
T Consensus       148 ~~~~~~~~vi~~~~~G~~~~~---~~-~~~~~~~~~~~~~~~~-------~~~---~~p~--~~~~~~~~~~~~l~~~~~  211 (452)
T PLN03141        148 ETKKIAFEVLVKALISLEPGE---EM-EFLKKEFQEFIKGLMS-------LPI---KLPG--TRLYRSLQAKKRMVKLVK  211 (452)
T ss_pred             HHHHHHHHHHHHHHcCCCchH---HH-HHHHHHHHHHhhhHHh-------Ccc---CCCc--hHhHHHHHHHHHHHHHHH
Confidence            999999999999999976532   11 3333333322221111       221   1110  012233355677888888


Q ss_pred             HHHHhhcCCCCcccc---cccCcHHHHHHhcccCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHH
Q 041279          261 QLIDDHLDPKRPQAA---RQQGDLIDDLLNLTKAGDLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQE  337 (505)
Q Consensus       261 ~~i~~~~~~~~~~~~---~~~~d~~~~ll~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  337 (505)
                      .+|++++.....+..   ....|+++.+++... +.++++++..+++.+++||+|||+.+++|++++|++||++|+++++
T Consensus       212 ~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~-~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~  290 (452)
T PLN03141        212 KIIEEKRRAMKNKEEDETGIPKDVVDVLLRDGS-DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTE  290 (452)
T ss_pred             HHHHHHHHHHhccCccccCChhhHHHHHHhcCC-CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHH
Confidence            888877654322111   012689999987642 3689999999999999999999999999999999999999999999


Q ss_pred             HHHHhhc----CCCCCCCCCCCCChhHHHHHHHhcCCCCCCCCccccccccceecCeecCCCcEEEechhhhccCCCCCC
Q 041279          338 EVTSVAK----DKGFVDEDDIPRLEYINAVIKETMRIQPAAQFIPKATTERCVIDGYHIPAETMVLVNVWAIGRDPQVWD  413 (505)
Q Consensus       338 Ei~~~~~----~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~  413 (505)
                      |++++.+    .++.++.+++.+||||+|||+|+||++|+++.++|.+.+|++++||.||||+.|+++.+++|+||++|+
T Consensus       291 Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~  370 (452)
T PLN03141        291 ENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYD  370 (452)
T ss_pred             HHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcC
Confidence            9998763    234477888999999999999999999999988899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCccccC
Q 041279          414 KPDKFIPERFVGSNIDMGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHK  493 (505)
Q Consensus       414 ~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  493 (505)
                      ||++|+||||++++    ..+..|+|||+|+|.|+|++||++|+++++|.|+++|+|+++++.   . .    ...++.|
T Consensus       371 dP~~F~PeRfl~~~----~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~---~-~----~~~~~~~  438 (452)
T PLN03141        371 NPYQFNPWRWQEKD----MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT---I-V----NFPTVRM  438 (452)
T ss_pred             CccccCcccccCCC----CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC---e-e----ecccccC
Confidence            99999999999753    235689999999999999999999999999999999999976542   1 1    2247888


Q ss_pred             CCCeeEEeecC
Q 041279          494 KKPLKLVATKS  504 (505)
Q Consensus       494 ~~~~~~~~~~~  504 (505)
                      +.++.|+++||
T Consensus       439 ~~~~~~~~~~~  449 (452)
T PLN03141        439 KRKLPIWVTRI  449 (452)
T ss_pred             CCCceEEEEeC
Confidence            89999999998


No 28 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=2.1e-70  Score=535.26  Aligned_cols=437  Identities=19%  Similarity=0.283  Sum_probs=338.3

Q ss_pred             CCCCCCCCCCCCccccccccCC----CCchhHHHHHHHHhhCC--eEEEeecCccEEEEcCHHHHHHHHHhcCccccCCC
Q 041279           27 TSAKFPPGPPGLPIIGNLHQFD----ATNLAFYLWKLSKQYGP--IFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRP  100 (505)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~--v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~  100 (505)
                      .+.+.||||+++|++|+++.+.    ..+++.++.+++++||+  +|++++++.++++++||+++++++.++. .|..+.
T Consensus        39 ~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~~~  117 (490)
T PLN02302         39 GQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEPGW  117 (490)
T ss_pred             CCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-ccccCC
Confidence            4567889999999999988753    24678889999999997  7999999999999999999999998763 454332


Q ss_pred             CcccccccccCccceecCCCchhHHHHHHHHhHhhc-ChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccchH
Q 041279          101 VLLGLQTLSYNYLGVTFAPHYNEWRDMRKRFVTSLL-NSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLS  179 (505)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~  179 (505)
                      ......  ..+ .+.+...+|+.|+++|+.+ .+.| ++++++.+.+.+.+.++++++.+.+           +..+|+.
T Consensus       118 ~~~~~~--~~g-~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~-----------~~~v~~~  182 (490)
T PLN02302        118 PESTVE--LIG-RKSFVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK-----------MGEIEFL  182 (490)
T ss_pred             chhHHH--Hhc-cccccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC-----------CCCEehH
Confidence            111111  122 2334445699999999998 5777 5788999999999999999988742           2358999


Q ss_pred             HHHHHHHHHHHHHHHhcccccCCChhHHHHHHHHHHHHHHhhccccccCccccchhhhhhhhhhHHHHHHHHHHHHHHHH
Q 041279          180 EIAMTCVRNIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRITGMHRRLQNHFKDCDRYY  259 (505)
Q Consensus       180 ~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~  259 (505)
                      +.+..+++++++.++||.+.+..   . ..+...+...........  .. +|...         .++..+..+.+.+++
T Consensus       183 ~~~~~~~~~vi~~~~~G~~~~~~---~-~~~~~~~~~~~~~~~~~~--~~-~p~~~---------~~~~~~~~~~l~~~~  246 (490)
T PLN02302        183 TELRKLTFKIIMYIFLSSESELV---M-EALEREYTTLNYGVRAMA--IN-LPGFA---------YHRALKARKKLVALF  246 (490)
T ss_pred             HHHHHHHHHHHHHHHcCCCChHH---H-HHHHHHHHHHHHHhhhCC--cC-CCchh---------hHHHHHHHHHHHHHH
Confidence            99999999999999999876432   1 222222221111111100  01 22111         122334556677777


Q ss_pred             HHHHHhhcCCCCcccccccCcHHHHHHhcccCC--CCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHH
Q 041279          260 QQLIDDHLDPKRPQAARQQGDLIDDLLNLTKAG--DLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQE  337 (505)
Q Consensus       260 ~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~--~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  337 (505)
                      .+.++++++....+...+..|+++.+++..+++  .++++++..+++.+++||+|||+++++|++++|+.||++|+|+++
T Consensus       247 ~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~  326 (490)
T PLN02302        247 QSIVDERRNSRKQNISPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKA  326 (490)
T ss_pred             HHHHHHHHHhhhccCCCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            777777765432211112378999999875432  589999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCC----CCCCCCCCCCChhHHHHHHHhcCCCCCCCCccccccccceecCeecCCCcEEEechhhhccCCCCCC
Q 041279          338 EVTSVAKDK----GFVDEDDIPRLEYINAVIKETMRIQPAAQFIPKATTERCVIDGYHIPAETMVLVNVWAIGRDPQVWD  413 (505)
Q Consensus       338 Ei~~~~~~~----~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~  413 (505)
                      |++++.+..    ..++++++++||||+|||+|+||++|+++...|.+.+|++++|+.||||+.|.++.+++||||++|+
T Consensus       327 E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~  406 (490)
T PLN02302        327 EQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYP  406 (490)
T ss_pred             HHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCC
Confidence            999988642    1267888999999999999999999999977899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCccccC
Q 041279          414 KPDKFIPERFVGSNIDMGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHK  493 (505)
Q Consensus       414 ~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  493 (505)
                      ||++|+||||++..    ..+..++|||+|+|.|+|++||.+|++++++.|+++|+|++.++.    ....  ...+..|
T Consensus       407 dP~~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~----~~~~--~~~~~~p  476 (490)
T PLN02302        407 NPKEFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG----CKVM--YLPHPRP  476 (490)
T ss_pred             CccccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC----Ccce--eCCCCCC
Confidence            99999999999642    245689999999999999999999999999999999999986542    1122  2233677


Q ss_pred             CCCeeEEeecCC
Q 041279          494 KKPLKLVATKSI  505 (505)
Q Consensus       494 ~~~~~~~~~~~~  505 (505)
                      +.++.+++++|.
T Consensus       477 ~~~~~~~~~~~~  488 (490)
T PLN02302        477 KDNCLARITKVA  488 (490)
T ss_pred             CCCceEEEEecc
Confidence            789999998873


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=4.2e-70  Score=528.43  Aligned_cols=450  Identities=22%  Similarity=0.333  Sum_probs=344.1

Q ss_pred             CCCCCCccccccccCC----CCchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCCccccccc
Q 041279           33 PGPPGLPIIGNLHQFD----ATNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPVLLGLQTL  108 (505)
Q Consensus        33 pgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~  108 (505)
                      .|-.+||++|..+++.    .+.++..+.+|+++||++|++++++.+.++++||+++++|+.+.+..|..++........
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~   94 (489)
T PLN02936         15 GDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFL   94 (489)
T ss_pred             CCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHHH
Confidence            5777999999887753    467788999999999999999999999999999999999998876666654322111111


Q ss_pred             ccCccceecCCCchhHHHHHHHHhHhhcChhHHHHhHH-hHHHHHHHHHHHHHhcccccccCCCCCcccchHHHHHHHHH
Q 041279          109 SYNYLGVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRR-VRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEIAMTCVR  187 (505)
Q Consensus       109 ~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~~~~~~  187 (505)
                        .+.+ ++..+|+.|+++|+.+ .+.|+.+++..+.+ .+.++++++++.+.+...       ++.++|+.+.+..+++
T Consensus        95 --~~~~-i~~~~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~-------~g~~vd~~~~~~~~~~  163 (489)
T PLN02936         95 --FGSG-FAIAEGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVAL-------SGEAVNMEAKFSQLTL  163 (489)
T ss_pred             --hcCc-cccCCchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCceeHHHHHHHHHH
Confidence              1233 3445699999999998 79999888887654 778889999999876543       3568999999999999


Q ss_pred             HHHHHHHhcccccCCChhHHHHHHHHHHHHHHhhccccccCccccchh-hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 041279          188 NIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLSGTIFFSDCSFSFIG-NCLDRITGMHRRLQNHFKDCDRYYQQLIDDH  266 (505)
Q Consensus       188 ~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  266 (505)
                      ++++.++||.+++..+.+  .++.+.+......... ....+ +|++. +++.++....++..++.+.+.+++.+.++++
T Consensus       164 dvi~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~-~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~  239 (489)
T PLN02936        164 DVIGLSVFNYNFDSLTTD--SPVIQAVYTALKEAET-RSTDL-LPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKC  239 (489)
T ss_pred             HHHHHHHcCCCccccccC--cHHHHHHHHHHHHHHH-hhhcc-chHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998864322  1222222222211111 11122 34321 1111111123455566777777777777665


Q ss_pred             cCCCCc-------cc--ccccCcHHHHHHhcccCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHH
Q 041279          267 LDPKRP-------QA--ARQQGDLIDDLLNLTKAGDLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQE  337 (505)
Q Consensus       267 ~~~~~~-------~~--~~~~~d~~~~ll~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  337 (505)
                      ++..+.       +.  .....|+++.|++..+  .++++++.++++.+++||+|||+++++|++++|++||++|+++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~--~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~  317 (489)
T PLN02936        240 KEIVEAEGEVIEGEEYVNDSDPSVLRFLLASRE--EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQE  317 (489)
T ss_pred             HHHHhhcccccccccccccCchHHHHHHHhccc--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            432110       00  1122679999987543  589999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCCCCCCChhHHHHHHHhcCCCCCCC-CccccccccceecCeecCCCcEEEechhhhccCCCCCCCCC
Q 041279          338 EVTSVAKDKGFVDEDDIPRLEYINAVIKETMRIQPAAQ-FIPKATTERCVIDGYHIPAETMVLVNVWAIGRDPQVWDKPD  416 (505)
Q Consensus       338 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~-~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  416 (505)
                      |++++++. +.++++++++||||+|||+||||++|+++ ..+|.+..|++++|+.||+|+.|+++.+.+||||++|+||+
T Consensus       318 Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~  396 (489)
T PLN02936        318 ELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAE  396 (489)
T ss_pred             HHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCcc
Confidence            99999875 34788889999999999999999999999 56565566777899999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCC--CCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCccccCC
Q 041279          417 KFIPERFVGSNID--MGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKK  494 (505)
Q Consensus       417 ~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (505)
                      +|+||||++++..  ....+..++|||.|+|.|+|++||++|+++++++|+++|++++.++.   ++  ....+++..++
T Consensus       397 ~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~---~~--~~~~~~~~~~~  471 (489)
T PLN02936        397 EFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ---DI--VMTTGATIHTT  471 (489)
T ss_pred             ccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC---cc--ceecceEEeeC
Confidence            9999999965321  12234589999999999999999999999999999999999987653   22  22245667788


Q ss_pred             CCeeEEeecCC
Q 041279          495 KPLKLVATKSI  505 (505)
Q Consensus       495 ~~~~~~~~~~~  505 (505)
                      ++++|+++||.
T Consensus       472 ~~~~v~~~~R~  482 (489)
T PLN02936        472 NGLYMTVSRRR  482 (489)
T ss_pred             CCeEEEEEeee
Confidence            89999999984


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=2.5e-68  Score=514.77  Aligned_cols=443  Identities=18%  Similarity=0.242  Sum_probs=335.6

Q ss_pred             CccccccccCCCCchhHHHHHHHHhhC-CeEEEeecCccEEEEcCHHHHHHHHHhcCccccCCCCccc-ccccccCccce
Q 041279           38 LPIIGNLHQFDATNLAFYLWKLSKQYG-PIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFAGRPVLLG-LQTLSYNYLGV  115 (505)
Q Consensus        38 ~p~~G~~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~  115 (505)
                      .++.|+.... ..+....+..+.++++ .+++++.+|.  ++++||+.+++++..+...|.+...... .... . +.+ 
T Consensus        49 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~-~-g~g-  122 (502)
T PLN02426         49 AYLTASWAKD-FDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDL-L-GRG-  122 (502)
T ss_pred             CCccHHHHHh-cccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh-c-CCc-
Confidence            4577887664 2345556666888887 6788876664  8999999999999987666654432211 1111 1 234 


Q ss_pred             ecCCCchhHHHHHHHHhHhhcChhHHHHhH--HhHHHHHHHHHHHHHhcccccccCCCCCcccchHHHHHHHHHHHHHHH
Q 041279          116 TFAPHYNEWRDMRKRFVTSLLNSNRIEQFR--RVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEIAMTCVRNIIFRV  193 (505)
Q Consensus       116 ~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~i~~~  193 (505)
                      +++.+|+.|+++||.+ ++.|+.++++.+.  +.+.+.++++++.+.+..+.     +.+.++|+.+++.++++|+|+.+
T Consensus       123 i~~~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~-----~~~~~vd~~~~~~~~t~dvi~~~  196 (502)
T PLN02426        123 IFNVDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADD-----GEGAVLDLQDVFRRFSFDNICKF  196 (502)
T ss_pred             eeecCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCCceEcHHHHHHHHHHHHHHHH
Confidence            4556799999999998 7999999988764  56777777888887654321     12457999999999999999999


Q ss_pred             HhcccccCCChhH-HHHHHHHHHHHHHhhccccccCccccchhhhhhhhh-hHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 041279          194 TFSKRFEDDGPAA-VNRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRIT-GMHRRLQNHFKDCDRYYQQLIDDHLDPKR  271 (505)
Q Consensus       194 ~fg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  271 (505)
                      +||.+++..+.+. ..++.+.+......... ..... .|+++++..+++ +..++..+..+.+.+++.+.|+++++...
T Consensus       197 ~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~  274 (502)
T PLN02426        197 SFGLDPGCLELSLPISEFADAFDTASKLSAE-RAMAA-SPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF  274 (502)
T ss_pred             HhCCCCcccCCCCCccHHHHHHHHHHHHHHH-HHhcc-hhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            9999987653211 13344444333222111 11111 343332222221 22455677788889999999998765421


Q ss_pred             cccccccCcHHHHHHhcccCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCC-CCCC
Q 041279          272 PQAARQQGDLIDDLLNLTKAGDLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQEEVTSVAKDK-GFVD  350 (505)
Q Consensus       272 ~~~~~~~~d~~~~ll~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~~  350 (505)
                         . ...|+++.+++..    .+++++.++++++++||+|||+++++|++|+|++||++|+|+++|++++.+.+ ..++
T Consensus       275 ---~-~~~dll~~ll~~~----~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t  346 (502)
T PLN02426        275 ---S-ASKDLLSRFMASI----NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAAS  346 (502)
T ss_pred             ---C-CcchHHHHHHhcC----CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCC
Confidence               1 1278999999763    37889999999999999999999999999999999999999999999988753 3578


Q ss_pred             CCCCCCChhHHHHHHHhcCCCCCCCCcccccccccee-cCeecCCCcEEEechhhhccCCCCC-CCCCCCCCCCCCCCCC
Q 041279          351 EDDIPRLEYINAVIKETMRIQPAAQFIPKATTERCVI-DGYHIPAETMVLVNVWAIGRDPQVW-DKPDKFIPERFVGSNI  428 (505)
Q Consensus       351 ~~~l~~lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~  428 (505)
                      .+++++||||+|||+||||++|+++...|.+.+|.++ +|+.|||||.|.++.+++||||++| |||++|+||||++++.
T Consensus       347 ~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~  426 (502)
T PLN02426        347 FEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGV  426 (502)
T ss_pred             HHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCC
Confidence            9999999999999999999999999777999998876 9999999999999999999999999 9999999999997421


Q ss_pred             CCCCCCcccccCCCCCCCCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCccccCCCCeeEEeecCC
Q 041279          429 DMGGQNFEFIPFGSGRRICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVATKSI  505 (505)
Q Consensus       429 ~~~~~~~~~~~Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (505)
                      .....+..++|||+|+|.|+|+++|.+|++++++.|+++|++++.++..  + ......++++++++++.|++++|.
T Consensus       427 ~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~-~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        427 FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSN--R-APRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCC--C-CCcccceeEEecCCCEEEEEEEcc
Confidence            1122456799999999999999999999999999999999999864321  1 112335688899999999999883


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=7.1e-61  Score=455.14  Aligned_cols=413  Identities=16%  Similarity=0.245  Sum_probs=294.9

Q ss_pred             CCCCCCCCCCCCccccccccCC----CCchhHHHHHHHHhhCC-eEEEeecCccE-------EEEcCHHHHHHHHHh---
Q 041279           27 TSAKFPPGPPGLPIIGNLHQFD----ATNLAFYLWKLSKQYGP-IFSLRLAFRPA-------IVISSVKLVKEAFKT---   91 (505)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------vvv~dp~~~~~i~~~---   91 (505)
                      .+.+.|||+.++|++|++.++.    ..++..++++.++|||+ ||+++++|+|+       |+++||++++.+|.+   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            4566789999999999998653    34557899999999998 99999999766       999999999999975   


Q ss_pred             -cCccccCCCCcccccccccCcc--ceecCCCchhHHHHHHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhccccccc
Q 041279           92 -HDLQFAGRPVLLGLQTLSYNYL--GVTFAPHYNEWRDMRKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADE  168 (505)
Q Consensus        92 -~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~  168 (505)
                       +...+.... .....  ..|+.  ..++..+|+.|+++|+.+ .+.|+ ..++.+.+.|.+.+.++++.|.....    
T Consensus        94 ~~~~~~~~~~-~~~~~--l~G~~~~~s~~~~~g~~H~r~Rrll-~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~----  164 (480)
T PLN02648         94 DKRDVFTGTY-MPSTA--FTGGYRVLSYLDPSEPKHAKLKSFL-FELLK-SRHRRFIPEFRAAFAELFDTWEAELA----  164 (480)
T ss_pred             cccccceeee-ccCcc--ccCCceeeeecCCCCchHHHHHHHH-HHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHh----
Confidence             443343311 12222  22222  155566799999999998 68898 57788999999999999999965321    


Q ss_pred             CCCCCcccchHHHHHHHHHHHHHHHHhcccccCCChhHHHHHHHHHHHHHHhhccccccCcccc-chhhhhhh-hhhHHH
Q 041279          169 DGSSKVPINLSEIAMTCVRNIIFRVTFSKRFEDDGPAAVNRLDYLLAETQLLSGTIFFSDCSFS-FIGNCLDR-ITGMHR  246 (505)
Q Consensus       169 ~~~~~~~v~l~~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~-~~~~~~  246 (505)
                         .+..+|+.+.++.++++++++++||.+.+..  .....+........... .+......++ ++...+.. .+....
T Consensus       165 ---~~~~vdv~~~~~~lt~~vi~~~lfG~~~~~~--~l~~~~~~~~~~~~~~~-~~p~~~~~l~~~~~~~i~~~~~~~~~  238 (480)
T PLN02648        165 ---KKGKAEFNDPLDQMAFNFLCKALTGKDPSET--ALGSDGPALIQKWLALQ-LAPLASTGLPHVLEELLLHTFPLPFF  238 (480)
T ss_pred             ---hCCCccccchHHHHHHHHHHHHHcCCCcchh--hhccchhHHHHHHHHHH-hhHHHHcCchHHHHHHhhcccCCchh
Confidence               2446999999999999999999999866541  01011111221111100 0000000011 00000000 000000


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCcccccccCcHHHHHHhcccCCCCCHHHHHHHHHH-HHHhcccchHHHHHHHHHHH
Q 041279          247 RLQNHFKDCDRYYQQLIDDHLDPKRPQAARQQGDLIDDLLNLTKAGDLTLDDVKAAIME-IFIGATDTSKVTIEMAMTHL  325 (505)
Q Consensus       247 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~~~~~~l~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~L  325 (505)
                      ...+..+.+.+++++                   .++.+++...+++++++|+.++++. +.+++++|++++++|++|+|
T Consensus       239 ~~~~~~~~~~~~~~~-------------------~~~~ll~~~~~~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L  299 (480)
T PLN02648        239 LVKSDYDKLYDFFRA-------------------SATEALDLAEKFGISREEALHNLLFVLGFNAFGGFKIFFPALLKWV  299 (480)
T ss_pred             hhhccHHHHHHHHHH-------------------HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            000001111111111                   1223333332236999999999875 45667777888999999999


Q ss_pred             hhCcH-HHHHHHHHHHHhhcC-CCCCCCCCCCCChhHHHHHHHhcCCCCCCCCccccccccceec----CeecCCCcEEE
Q 041279          326 MKNPE-AMKKAQEEVTSVAKD-KGFVDEDDIPRLEYINAVIKETMRIQPAAQFIPKATTERCVID----GYHIPAETMVL  399 (505)
Q Consensus       326 ~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~~~----g~~ip~G~~v~  399 (505)
                      +.||+ +|+++++|++++.+. ++.++.+++.+||||++||+||||++|+++...|++.+|++++    ||.||||+.|+
T Consensus       300 ~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~  379 (480)
T PLN02648        300 GRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLF  379 (480)
T ss_pred             HcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEE
Confidence            99995 999999999999863 4468889999999999999999999999997778899999995    79999999999


Q ss_pred             echhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc---------CCCCCCCCCchhhhHHHHHHHHHHHHhhce-
Q 041279          400 VNVWAIGRDPQVWDKPDKFIPERFVGSNIDMGGQNFEFIP---------FGSGRRICPGITIALPSVELALANLLYKFD-  469 (505)
Q Consensus       400 ~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~---------Fg~G~r~C~G~~la~~e~~~~l~~ll~~f~-  469 (505)
                      ++.+.+|+||++|+||++|||+||++++.+   ....+++         ||+|+|.|+|++||++|+++++++|+++|+ 
T Consensus       380 ~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~  456 (480)
T PLN02648        380 GYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDS  456 (480)
T ss_pred             EChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCE
Confidence            999999999999999999999999865321   1123333         467889999999999999999999999998 


Q ss_pred             eecCCCC
Q 041279          470 WKMPHGM  476 (505)
Q Consensus       470 ~~~~~~~  476 (505)
                      |++.++.
T Consensus       457 ~~l~~~~  463 (480)
T PLN02648        457 FEIEVDT  463 (480)
T ss_pred             EeecCCc
Confidence            9987764


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=2.4e-55  Score=412.92  Aligned_cols=381  Identities=23%  Similarity=0.334  Sum_probs=300.4

Q ss_pred             hhHHHHHHHHhhCCeEEEeecCcc--EEEEcCHHHHHHHHHhcCccccCCCCccccc--ccccCccceecCCCchhHHHH
Q 041279           52 LAFYLWKLSKQYGPIFSLRLAFRP--AIVISSVKLVKEAFKTHDLQFAGRPVLLGLQ--TLSYNYLGVTFAPHYNEWRDM  127 (505)
Q Consensus        52 ~~~~~~~~~~kyG~v~~~~~~~~~--~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~  127 (505)
                      .......+.+.||.++++...+..  +++++++++++++++++. .+..........  .....+.+.++..+|+.|.++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            344556778889999988877655  799999999999999875 121111111111  111122333566779999999


Q ss_pred             HHHHhHhhcChhHHHHhHHhHHHHHHHHHHHHHhcccccccCCCCCcccchHHHHHHHHHHHHHHHHhcccccCCChhHH
Q 041279          128 RKRFVTSLLNSNRIEQFRRVRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEIAMTCVRNIIFRVTFSKRFEDDGPAAV  207 (505)
Q Consensus       128 R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~i~~~~fg~~~~~~~~~~~  207 (505)
                      |+.+ .+.|+++.++.+.+.+.+.++++++.+ .          .+...++.+.+..++.++|+ .+||.+.+..     
T Consensus       103 Rkl~-~~~F~~~~~~~~~~~i~~~~~~~~~~~-~----------~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~-----  164 (411)
T COG2124         103 RKLL-APAFTPRALRGYRPLIREIADRLLDDL-W----------QGGADLVLDFAAELTLRVIA-ELLGVPLEDR-----  164 (411)
T ss_pred             HHHh-ccccCHHHHHHHHHHHHHHHHHHHHhc-c----------cCCchhHHHHhhhhhHHHHH-HHhCCCHHHH-----
Confidence            9998 799999999999999999999999988 2          12568899999999999999 9999877642     


Q ss_pred             HHHHHHHHHHHHhhccccccCccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccccCcHHHHHHh
Q 041279          208 NRLDYLLAETQLLSGTIFFSDCSFSFIGNCLDRITGMHRRLQNHFKDCDRYYQQLIDDHLDPKRPQAARQQGDLIDDLLN  287 (505)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~  287 (505)
                      ..+...........         .|...   .  .....+..++...+.+++..+|++++...       ..|+++.|+.
T Consensus       165 ~~~~~~~~~~~~~~---------~~~~~---~--~~~~~~~~~a~~~~~~~~~~li~~rR~~~-------~~dlls~l~~  223 (411)
T COG2124         165 PQLLRWSDALLLRL---------DPDLG---P--EEPWRRARAARRELDAYLRALIAERRAAP-------RDDLLSLLLS  223 (411)
T ss_pred             HHHHHHHHHHHhcc---------CcccC---C--cccHHHHHHHHHHHHHHHHHHHHHhccCC-------cccHHHHHHH
Confidence            11111111111110         11111   0  11245566788889999999999988321       1889999998


Q ss_pred             cccCCC--CCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCCCCCCCCCCChhHHHHHH
Q 041279          288 LTKAGD--LTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQEEVTSVAKDKGFVDEDDIPRLEYINAVIK  365 (505)
Q Consensus       288 ~~~~~~--l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~  365 (505)
                      ..++++  +|++|+.++++++++||+|||+++++|+++.|++||++++++++|.+.                ||++++++
T Consensus       224 a~~~~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~  287 (411)
T COG2124         224 AEDDGGGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVE  287 (411)
T ss_pred             HhhCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHH
Confidence            887653  999999999999999999999999999999999999999999998654                89999999


Q ss_pred             HhcCCCCCCCCccccccccceecCeecCCCcEEEechhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q 041279          366 ETMRIQPAAQFIPKATTERCVIDGYHIPAETMVLVNVWAIGRDPQVWDKPDKFIPERFVGSNIDMGGQNFEFIPFGSGRR  445 (505)
Q Consensus       366 EtlRl~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r  445 (505)
                      |+||++|+++.+.|.+.+|++++|+.||||+.|++..+++||||++|++|++|||+||.          ..|+|||+|+|
T Consensus       288 E~LR~~ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H  357 (411)
T COG2124         288 ETLRLYPPVPLARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPH  357 (411)
T ss_pred             HHHHhCCchhccceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCc
Confidence            99999999999889999999999999999999999999999999999999999999996          56899999999


Q ss_pred             CCCchhhhHHHHHHHHHHHHhhceeecCCCCCCCCCCccccCCccccCCCCeeEEeecC
Q 041279          446 ICPGITIALPSVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVATKS  504 (505)
Q Consensus       446 ~C~G~~la~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (505)
                      .|+|.+||++|++++++.|+++|++....+ .     .......+..+..+..+.++.|
T Consensus       358 ~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~-----~~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         358 RCLGAALARLELKVALAELLRRFPLLLLAE-P-----PPLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             cccCHHHHHHHHHHHHHHHHHhCchhhcCC-C-----CCccccccccCCCcceeeeecC
Confidence            999999999999999999999999987654 1     1122344555556666666654


No 33 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=83.58  E-value=0.68  Score=29.57  Aligned_cols=8  Identities=38%  Similarity=0.667  Sum_probs=6.7

Q ss_pred             CCCCCCCC
Q 041279          419 IPERFVGS  426 (505)
Q Consensus       419 ~P~R~l~~  426 (505)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            89999964


No 34 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=83.30  E-value=2.8  Score=28.82  Aligned_cols=23  Identities=35%  Similarity=0.428  Sum_probs=13.9

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHh
Q 041279            1 MALLVLGILFGLPIFLLFLLQKH   23 (505)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~   23 (505)
                      |++++++++++.+++.++...+.
T Consensus        35 m~~lvI~~iFil~VilwfvCC~k   57 (94)
T PF05393_consen   35 MWFLVICGIFILLVILWFVCCKK   57 (94)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHH
Confidence            56777777766655555555444


No 35 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=59.86  E-value=2.3  Score=35.53  Aligned_cols=43  Identities=23%  Similarity=0.213  Sum_probs=31.9

Q ss_pred             ChhHHHHHHHhcCCCCCCCCccccccccceecCeecCCCcEEEe
Q 041279          357 LEYINAVIKETMRIQPAAQFIPKATTERCVIDGYHIPAETMVLV  400 (505)
Q Consensus       357 lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~  400 (505)
                      -....|||.|+.-..... .+.=+..+|+.++|..|||||.+.-
T Consensus        52 ~n~I~A~V~~~qtv~~Gs-~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGS-RVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCC-EEEEEEcCceEECCEEeCCCCEEEE
Confidence            456778999998665443 3333556789999999999998776


No 36 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=54.65  E-value=36  Score=20.82  Aligned_cols=42  Identities=24%  Similarity=0.326  Sum_probs=32.0

Q ss_pred             HHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHH
Q 041279          298 DVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQEEV  339 (505)
Q Consensus       298 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  339 (505)
                      ++..++..++-.|.+-.+-.++.-+...--||+.+..+..|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            455666677777777777777777777777899888888775


No 37 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=47.45  E-value=19  Score=22.92  Aligned_cols=23  Identities=30%  Similarity=0.469  Sum_probs=17.8

Q ss_pred             HHHHHHhhCcHHHHHHHHHHHHh
Q 041279          320 MAMTHLMKNPEAMKKAQEEVTSV  342 (505)
Q Consensus       320 ~~l~~L~~~p~~~~~l~~Ei~~~  342 (505)
                      -++.+|..||++.+++.+.=.+.
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asL   26 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASL   26 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeE
Confidence            45789999999999997753333


No 38 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=47.28  E-value=15  Score=28.46  Aligned_cols=8  Identities=38%  Similarity=0.559  Sum_probs=3.8

Q ss_pred             Cccccccc
Q 041279           38 LPIIGNLH   45 (505)
Q Consensus        38 ~p~~G~~~   45 (505)
                      -|+-|+.+
T Consensus        32 ~P~~gt~w   39 (130)
T PF12273_consen   32 QPIYGTRW   39 (130)
T ss_pred             CCcCCcee
Confidence            35555543


No 39 
>PRK14750 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=45.48  E-value=47  Score=17.51  Aligned_cols=22  Identities=14%  Similarity=0.174  Sum_probs=12.0

Q ss_pred             CchHHHHHHHHHHHHHHHHHHH
Q 041279            1 MALLVLGILFGLPIFLLFLLQK   22 (505)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~   22 (505)
                      |.+-+.+..+++++++.|+.+-
T Consensus         1 Ms~~vi~g~llv~lLl~YLvYA   22 (29)
T PRK14750          1 MNFSIVCGALLVLLLLGYLVYA   22 (29)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH
Confidence            4445555555555556665543


No 40 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=43.49  E-value=34  Score=26.03  Aligned_cols=6  Identities=17%  Similarity=0.849  Sum_probs=2.2

Q ss_pred             HHHHHH
Q 041279            5 VLGILF   10 (505)
Q Consensus         5 ~~~~~~   10 (505)
                      ++++++
T Consensus        70 i~gv~a   75 (122)
T PF01102_consen   70 IFGVMA   75 (122)
T ss_dssp             HHHHHH
T ss_pred             hHHHHH
Confidence            333333


No 41 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=41.43  E-value=29  Score=26.36  Aligned_cols=23  Identities=17%  Similarity=0.440  Sum_probs=9.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhc
Q 041279            4 LVLGILFGLPIFLLFLLQKHRKN   26 (505)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~   26 (505)
                      .+.+.++++++++.|+.+++++.
T Consensus        72 gv~aGvIg~Illi~y~irR~~Kk   94 (122)
T PF01102_consen   72 GVMAGVIGIILLISYCIRRLRKK   94 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHS--
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc
Confidence            34444445444555554444433


No 42 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=38.66  E-value=27  Score=26.83  Aligned_cols=22  Identities=14%  Similarity=0.323  Sum_probs=16.6

Q ss_pred             CCCchhhhHHHHHHHHHHHHhh
Q 041279          446 ICPGITIALPSVELALANLLYK  467 (505)
Q Consensus       446 ~C~G~~la~~e~~~~l~~ll~~  467 (505)
                      .|.|+.||+.++-.++.+|+..
T Consensus        19 N~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHHS
T ss_pred             cccchHHHHHHHHHHHHHHhcC
Confidence            7999999999999999999874


No 43 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=36.58  E-value=1.3e+02  Score=29.04  Aligned_cols=38  Identities=16%  Similarity=0.247  Sum_probs=23.0

Q ss_pred             HHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcCcccc
Q 041279           60 SKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHDLQFA   97 (505)
Q Consensus        60 ~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~~~~~   97 (505)
                      .-+||.|++-.+.++.+-|=.=|..-++-|.++...|.
T Consensus       220 ~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~  257 (534)
T KOG3653|consen  220 RGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYS  257 (534)
T ss_pred             cCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHh
Confidence            34789999888877666554444444444545444444


No 44 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=36.39  E-value=17  Score=22.64  Aligned_cols=11  Identities=45%  Similarity=0.930  Sum_probs=9.4

Q ss_pred             ccCCCCCCCCC
Q 041279          438 IPFGSGRRICP  448 (505)
Q Consensus       438 ~~Fg~G~r~C~  448 (505)
                      .+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            47999999985


No 45 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=35.63  E-value=74  Score=22.39  Aligned_cols=43  Identities=14%  Similarity=0.335  Sum_probs=27.0

Q ss_pred             HHHHHhcccchHHHHHHHHHHHhh-------CcHHHHHHHHHHHHhhcCC
Q 041279          304 MEIFIGATDTSKVTIEMAMTHLMK-------NPEAMKKAQEEVTSVAKDK  346 (505)
Q Consensus       304 ~~~~~ag~~tt~~~l~~~l~~L~~-------~p~~~~~l~~Ei~~~~~~~  346 (505)
                      +.+|+.-..+++.+.--=|..++.       .|++.+.+|+||-+++...
T Consensus         4 ~dff~~r~~~Sa~~AkeRLQiilA~eR~~~~~pd~l~~Lr~eIl~VI~KY   53 (88)
T COG0851           4 FDFFFSRKKNSAETAKERLQLILAHERAAGLQPDYLEQLRKEILEVISKY   53 (88)
T ss_pred             HHHHHhcCCCcHHHHHHHHHHhhhhhhhcCCCcchHHHHHHHHHHHHHHH
Confidence            344443333566655554444443       3889999999999987643


No 46 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=35.31  E-value=1.6e+02  Score=21.59  Aligned_cols=61  Identities=21%  Similarity=0.283  Sum_probs=40.7

Q ss_pred             CCCCCCCCCCCccccccccCCCCchhHHHHHHHHhhCCeEEEeecC------ccEEEEcCHHHHHHHHHh
Q 041279           28 SAKFPPGPPGLPIIGNLHQFDATNLAFYLWKLSKQYGPIFSLRLAF------RPAIVISSVKLVKEAFKT   91 (505)
Q Consensus        28 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~------~~~vvv~dp~~~~~i~~~   91 (505)
                      +.+.||--..+-++.|+..   +-....+-++.-+||+|.++.+|.      .-+||-.|-.+++....+
T Consensus        10 ~~rlppevnriLyirNLp~---~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   10 NIRLPPEVNRILYIRNLPF---KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CCCCChhhheeEEEecCCc---cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            3444454445666666542   223445678889999999999874      456777888888877765


No 47 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=32.48  E-value=52  Score=25.96  Aligned_cols=42  Identities=19%  Similarity=0.400  Sum_probs=26.6

Q ss_pred             cccccceecCeecCCCcEEEechhh-------hccCCCCCCCCCCCCCCC
Q 041279          380 ATTERCVIDGYHIPAETMVLVNVWA-------IGRDPQVWDKPDKFIPER  422 (505)
Q Consensus       380 ~~~~d~~~~g~~ip~G~~v~~~~~~-------~~~d~~~~~~p~~F~P~R  422 (505)
                      ...+|+.++|..||+|+.-+.....       .|++...|.. ..+||+.
T Consensus        51 ~f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~~   99 (145)
T PF11138_consen   51 TFSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPSK   99 (145)
T ss_pred             EECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCchh
Confidence            3456889999999999976554322       4555555644 4455443


No 48 
>PHA03049 IMV membrane protein; Provisional
Probab=31.10  E-value=1.3e+02  Score=19.77  Aligned_cols=6  Identities=33%  Similarity=0.213  Sum_probs=2.3

Q ss_pred             HHHHHH
Q 041279           56 LWKLSK   61 (505)
Q Consensus        56 ~~~~~~   61 (505)
                      +.++++
T Consensus        58 l~Sfyk   63 (68)
T PHA03049         58 LNSFYK   63 (68)
T ss_pred             HHHHHH
Confidence            334433


No 49 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=30.98  E-value=13  Score=34.93  Aligned_cols=44  Identities=18%  Similarity=0.157  Sum_probs=32.7

Q ss_pred             ChhHHHHHHHhcCCCCCCCCccccccccceecCeecCCCcEEEec
Q 041279          357 LEYINAVIKETMRIQPAAQFIPKATTERCVIDGYHIPAETMVLVN  401 (505)
Q Consensus       357 lp~l~a~i~EtlRl~~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~  401 (505)
                      -..+.|||.|+.-+.-.. .+.=+..+|+.++|..||+||.|...
T Consensus       255 ~n~I~A~V~~~qtv~~G~-~vrlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGS-AVKLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEecCC-EEEEEEcCceeeCCEEecCCCEEEEE
Confidence            456778999998776433 33335667899999999999987754


No 50 
>PHA03162 hypothetical protein; Provisional
Probab=30.66  E-value=51  Score=25.08  Aligned_cols=24  Identities=21%  Similarity=0.508  Sum_probs=20.1

Q ss_pred             CCCCCCCCchhhhHHHHHHHHHHH
Q 041279          441 GSGRRICPGITIALPSVELALANL  464 (505)
Q Consensus       441 g~G~r~C~G~~la~~e~~~~l~~l  464 (505)
                      ++|.+.|||+...+-|+-.=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            569999999999998887776665


No 51 
>PF05261 Tra_M:  TraM protein, DNA-binding;  InterPro: IPR007925 The TraM protein is an essential part of the DNA transfer machinery of the conjugative resistance plasmid R1 (IncFII). On the basis of mutational analyses, it was shown that the essential transfer protein TraM has at least two functions. First, a functional TraM protein was found to be required for normal levels of transfer gene expression. Second, experimental evidence was obtained that TraM stimulates efficient site-specific single-stranded DNA cleavage at the oriT, in vivo. Furthermore, a specific interaction of the cytoplasmic TraM protein with the membrane protein TraD was demonstrated, suggesting that the TraM protein creates a physical link between the relaxosomal nucleoprotein complex and the membrane-bound DNA transfer apparatus [].; GO: 0003677 DNA binding, 0000746 conjugation; PDB: 3ON0_A 3OMY_B 1DP3_A 2G9E_A 3D8A_B 2G7O_A.
Probab=30.32  E-value=2.5e+02  Score=21.43  Aligned_cols=91  Identities=13%  Similarity=0.183  Sum_probs=46.7

Q ss_pred             HHHHHHHHHHhhcCCCCcccccccCcHHHHHHhc-------c---cCCCCCHHHHHHHHHHHHHhcccchHHHHHHH--H
Q 041279          255 CDRYYQQLIDDHLDPKRPQAARQQGDLIDDLLNL-------T---KAGDLTLDDVKAAIMEIFIGATDTSKVTIEMA--M  322 (505)
Q Consensus       255 ~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~ll~~-------~---~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~--l  322 (505)
                      ..+-+..+++++++......+-...+..+.|++.       +   ++++++.++.-..++.-+.-...+++..|...  .
T Consensus        12 v~~~I~~iVe~r~qeGA~~~dvs~SSv~smLlELGLrVY~~Q~E~k~s~Fnq~eFnk~lLe~v~kt~~~~~~ILg~~~ls   91 (127)
T PF05261_consen   12 VLEEINDIVEERRQEGATEKDVSFSSVSSMLLELGLRVYEAQMERKESGFNQEEFNKVLLENVSKTRFTVSKILGMSSLS   91 (127)
T ss_dssp             HHHHHHHHHHHHHCCT-TTTT--HHHHHHHHHHCCCCHHHHCCHHCSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHhHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            3445566777777654433222224566667653       1   23478888877766666666555555544432  2


Q ss_pred             HHHhhCc---------HHHHHHHHHHHHhhcC
Q 041279          323 THLMKNP---------EAMKKAQEEVTSVAKD  345 (505)
Q Consensus       323 ~~L~~~p---------~~~~~l~~Ei~~~~~~  345 (505)
                      -++..+|         ++.++++++++..++.
T Consensus        92 ~~v~~~~~~ey~~m~~~I~~~v~e~m~~FFpe  123 (127)
T PF05261_consen   92 PEVKGNPKFEYENMVEKIREKVSEEMERFFPE  123 (127)
T ss_dssp             HHHCCHCGG-HHHHHHHHHHHHHHHHHHHS-C
T ss_pred             HhhccCCcccHHHHHHHHHHHHHHHHHhcCCC
Confidence            3333333         3556666666666654


No 52 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=30.19  E-value=1e+02  Score=23.69  Aligned_cols=42  Identities=12%  Similarity=0.166  Sum_probs=32.2

Q ss_pred             CchhHHHHHHHHhhCCeEEEeecCccEEEEcCHHHHHHHHHhcC
Q 041279           50 TNLAFYLWKLSKQYGPIFSLRLAFRPAIVISSVKLVKEAFKTHD   93 (505)
Q Consensus        50 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~dp~~~~~i~~~~~   93 (505)
                      .+....+++|.++||.+--..  +...+...|++.++++..++.
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~~--~~~~l~~~d~~~l~~l~~~~~  115 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLYK--GAYLLECDDPELLDELLADPE  115 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEec--CeEEEEECCHHHHHHHHhChh
Confidence            455678899999999765432  466778899999999987644


No 53 
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=30.07  E-value=62  Score=25.83  Aligned_cols=40  Identities=18%  Similarity=0.243  Sum_probs=30.8

Q ss_pred             CCchhHHHHHHHHhhC-CeEEEeecC-cc---EEEEcCHHHHHHH
Q 041279           49 ATNLAFYLWKLSKQYG-PIFSLRLAF-RP---AIVISSVKLVKEA   88 (505)
Q Consensus        49 ~~~~~~~~~~~~~kyG-~v~~~~~~~-~~---~vvv~dp~~~~~i   88 (505)
                      .+......+++.+++| +|.+++++| .|   -+||+||-.+..+
T Consensus       153 GGkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAGvl  197 (218)
T COG1707         153 GGKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAGVL  197 (218)
T ss_pred             cchHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhhhh
Confidence            5567788999999999 999999876 22   2688888765443


No 54 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=29.40  E-value=1e+02  Score=17.82  Aligned_cols=21  Identities=14%  Similarity=0.390  Sum_probs=13.8

Q ss_pred             HHHHHHHHHh-hCcHHHHHHHH
Q 041279          317 TIEMAMTHLM-KNPEAMKKAQE  337 (505)
Q Consensus       317 ~l~~~l~~L~-~~p~~~~~l~~  337 (505)
                      .+...+..++ +||++++.++.
T Consensus        14 qL~~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   14 QLQSLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHHHHhChhHHHHHHh
Confidence            3444455555 89999888765


No 55 
>PRK06789 flagellar motor switch protein; Validated
Probab=28.33  E-value=62  Score=22.07  Aligned_cols=39  Identities=13%  Similarity=0.229  Sum_probs=31.4

Q ss_pred             HHHHhcCCCCCCC-Ccccccccc--ceecCeecCCCcEEEec
Q 041279          363 VIKETMRIQPAAQ-FIPKATTER--CVIDGYHIPAETMVLVN  401 (505)
Q Consensus       363 ~i~EtlRl~~~~~-~~~R~~~~d--~~~~g~~ip~G~~v~~~  401 (505)
                      -++|-+.+.+..- .+-|.+.++  +.++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            4788999998877 677777776  45699999999988875


No 56 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=28.29  E-value=36  Score=25.92  Aligned_cols=21  Identities=33%  Similarity=0.349  Sum_probs=17.5

Q ss_pred             cccccceecCeecCCCcEEEe
Q 041279          380 ATTERCVIDGYHIPAETMVLV  400 (505)
Q Consensus       380 ~~~~d~~~~g~~ip~G~~v~~  400 (505)
                      .++.|.+++|.+||+|+.|+.
T Consensus        72 I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   72 IAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             ecCCCcccCCeeecceEEEEE
Confidence            455688999999999998864


No 57 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=28.10  E-value=39  Score=23.65  Aligned_cols=19  Identities=21%  Similarity=0.566  Sum_probs=16.9

Q ss_pred             HHHHHHHHHHhhceeecCC
Q 041279          456 SVELALANLLYKFDWKMPH  474 (505)
Q Consensus       456 e~~~~l~~ll~~f~~~~~~  474 (505)
                      -|+-++.++|+-|||.|.+
T Consensus        61 ~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   61 CIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHhccCCceeee
Confidence            5889999999999999864


No 58 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=27.73  E-value=1.6e+02  Score=18.27  Aligned_cols=35  Identities=17%  Similarity=0.364  Sum_probs=24.8

Q ss_pred             HHHHHhhCCeEEEeecCc----cEEEEcCHHHHHHHHHh
Q 041279           57 WKLSKQYGPIFSLRLAFR----PAIVISSVKLVKEAFKT   91 (505)
Q Consensus        57 ~~~~~kyG~v~~~~~~~~----~~vvv~dp~~~~~i~~~   91 (505)
                      .+...+||+|-++.+...    -+|-..+++.++.....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            467789999988886542    34555789988888764


No 59 
>PRK14748 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=25.99  E-value=1.1e+02  Score=16.13  Aligned_cols=21  Identities=19%  Similarity=0.183  Sum_probs=9.4

Q ss_pred             CchHHHHHHHHHHHHHHHHHH
Q 041279            1 MALLVLGILFGLPIFLLFLLQ   21 (505)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~   21 (505)
                      |..-.+..++++++++.|+.+
T Consensus         1 Ms~~vi~G~ilv~lLlgYLvy   21 (29)
T PRK14748          1 MSAGVITGVLLVFLLLGYLVY   21 (29)
T ss_pred             CcHHHHHHHHHHHHHHHHHHH
Confidence            343344444444444555443


No 60 
>COG5329 Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
Probab=23.24  E-value=66  Score=31.76  Aligned_cols=27  Identities=19%  Similarity=0.324  Sum_probs=22.5

Q ss_pred             CchhHHHHHHHHhhCCeEEEeecCccE
Q 041279           50 TNLAFYLWKLSKQYGPIFSLRLAFRPA   76 (505)
Q Consensus        50 ~~~~~~~~~~~~kyG~v~~~~~~~~~~   76 (505)
                      ......+.++.++||+|+-+++.+++-
T Consensus       293 ~af~kHF~~L~~~YG~v~vvNLl~tK~  319 (570)
T COG5329         293 SAFDKHFDKLREKYGDVYVVNLLKTKG  319 (570)
T ss_pred             HHHHHHHHHHHHHcCCEEEEEcccCCc
Confidence            455678999999999999999887654


No 61 
>PF14164 YqzH:  YqzH-like protein
Probab=21.89  E-value=2.5e+02  Score=18.54  Aligned_cols=38  Identities=18%  Similarity=0.219  Sum_probs=22.2

Q ss_pred             hHHHHHHHHHHHHHhcccccccCCCCCcccchHHHHHHHHHHHHH
Q 041279          147 VRKDEIFRMVEKISKLGDAADEDGSSKVPINLSEIAMTCVRNIIF  191 (505)
Q Consensus       147 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~i~  191 (505)
                      .-..+-+.+...+....+       +....|+++.+..++.+.++
T Consensus        26 ls~~E~~~L~~~i~~~~~-------~~~~~Dl~eiVeDvVY~yiT   63 (64)
T PF14164_consen   26 LSDEEWEELCKHIQERKN-------EEPDEDLHEIVEDVVYDYIT   63 (64)
T ss_pred             CCHHHHHHHHHHHHHHHh-------cCCCchHHHHHHHHHHHHhc
Confidence            334445555555554433       34457888887777766553


No 62 
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=21.60  E-value=3.2e+02  Score=24.92  Aligned_cols=76  Identities=22%  Similarity=0.316  Sum_probs=50.6

Q ss_pred             CcHHHHHHhcccCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCCCCCC--CCCC
Q 041279          279 GDLIDDLLNLTKAGDLTLDDVKAAIMEIFIGATDTSKVTIEMAMTHLMKNPEAMKKAQEEVTSVAKDKGFVDED--DIPR  356 (505)
Q Consensus       279 ~d~~~~ll~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~--~l~~  356 (505)
                      ..+.+.|......|  +.+.|..++.+|-+.|.                +|...+.|.++-.-.+-.++.++..  +..+
T Consensus       330 ~aLrd~L~aL~TPG--tWDHI~~QiGMFSyTGL----------------tp~qV~~li~~h~vyLl~~GRInisGLN~~N  391 (410)
T KOG1412|consen  330 TALRDHLVALKTPG--TWDHITQQIGMFSYTGL----------------TPAQVDHLIENHKVYLLSDGRINISGLNMKN  391 (410)
T ss_pred             HHHHHHHHhcCCCC--cHHHHHhhccceeecCC----------------CHHHHHHHHHhceEEEecCCcEeeecccccc
Confidence            34666777665543  77889999988888776                3444555555544334445544444  4577


Q ss_pred             ChhHHHHHHHhcCCCC
Q 041279          357 LEYINAVIKETMRIQP  372 (505)
Q Consensus       357 lp~l~a~i~EtlRl~~  372 (505)
                      +.|.-..|.|+.|-.+
T Consensus       392 veyVAkAIde~Vr~~~  407 (410)
T KOG1412|consen  392 VEYVAKAIDETVRAIK  407 (410)
T ss_pred             HHHHHHHHHHHHHhhc
Confidence            8999999999998764


No 63 
>PF12606 RELT:  Tumour necrosis factor receptor superfamily member 19;  InterPro: IPR022248 The members of tumor necrosis factor receptor (TNFR) superfamily have been designated as the "guardians of the immune system" due to their roles in immune cell proliferation, differentiation, activation, and death (apoptosis).  RELT (receptor expressed in lymphoid tissues) is a member of the TNFR superfamily. The messenger RNA of RELT is especially abundant in hematologic tissues such as spleen, lymph node, and peripheral blood leukocytes as well as in leukemias and lymphomas. RELT is able to activate the NF-kappaB pathway and selectively binds tumor necrosis factor receptor-associated factor 1 []. RELT like proteins 1 and 2 (RELL1 and RELL2) are two RELT homologues that bind to RELT. The expression of RELL1 at the mRNA level is ubiquitous, whereas expression of RELL2 mRNA is more restricted to particular tissues [].
Probab=20.67  E-value=1.8e+02  Score=18.07  Aligned_cols=19  Identities=21%  Similarity=0.378  Sum_probs=8.4

Q ss_pred             chHHHHHHHHHHHHHHHHH
Q 041279            2 ALLVLGILFGLPIFLLFLL   20 (505)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~   20 (505)
                      +++++.++++..++...+.
T Consensus         3 ~~~iV~i~iv~~lLg~~I~   21 (50)
T PF12606_consen    3 AFLIVSIFIVMGLLGLSIC   21 (50)
T ss_pred             ehHHHHHHHHHHHHHHHHH
Confidence            3444544444444433333


No 64 
>PF05568 ASFV_J13L:  African swine fever virus J13L protein;  InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=20.12  E-value=1e+02  Score=23.82  Aligned_cols=8  Identities=13%  Similarity=0.393  Sum_probs=3.0

Q ss_pred             HHHHHHHH
Q 041279            5 VLGILFGL   12 (505)
Q Consensus         5 ~~~~~~~~   12 (505)
                      ++++++++
T Consensus        35 LiaIvVli   42 (189)
T PF05568_consen   35 LIAIVVLI   42 (189)
T ss_pred             HHHHHHHH
Confidence            33333333


Done!