Query 041295
Match_columns 209
No_of_seqs 51 out of 53
Neff 2.9
Searched_HMMs 29240
Date Mon Mar 25 09:19:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041295.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041295hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xwh_A Autoimmune regulator; P 99.4 2.5E-13 8.4E-18 95.4 3.8 53 36-91 4-56 (66)
2 2puy_A PHD finger protein 21A; 99.3 5E-13 1.7E-17 91.9 3.2 51 38-91 3-53 (60)
3 1fp0_A KAP-1 corepressor; PHD 99.3 1.3E-12 4.6E-17 98.5 5.5 55 34-91 19-73 (88)
4 1mm2_A MI2-beta; PHD, zinc fin 99.3 1E-12 3.5E-17 91.3 4.0 51 38-91 7-57 (61)
5 2yql_A PHD finger protein 21A; 99.3 1E-12 3.5E-17 89.4 3.9 50 37-89 6-55 (56)
6 2l5u_A Chromodomain-helicase-D 99.3 1.5E-12 5.1E-17 90.5 4.0 51 37-90 8-58 (61)
7 2lri_C Autoimmune regulator; Z 99.3 2E-12 6.7E-17 92.0 3.0 51 36-89 8-58 (66)
8 2e6r_A Jumonji/ARID domain-con 99.2 4.5E-12 1.6E-16 94.5 4.5 62 26-89 2-65 (92)
9 3o36_A Transcription intermedi 99.2 4E-12 1.4E-16 102.3 4.1 51 38-91 2-52 (184)
10 2yt5_A Metal-response element- 99.2 2.3E-12 7.7E-17 89.1 1.6 55 36-93 2-64 (66)
11 3u5n_A E3 ubiquitin-protein li 99.2 5.9E-12 2E-16 103.4 3.8 53 37-92 4-56 (207)
12 2l43_A N-teminal domain from h 99.2 1.4E-11 4.8E-16 91.4 3.4 52 36-92 21-77 (88)
13 1wev_A Riken cDNA 1110020M19; 99.1 1.2E-11 4E-16 91.5 2.5 51 39-92 15-74 (88)
14 2ku3_A Bromodomain-containing 99.1 1.5E-11 5.3E-16 88.5 2.8 53 35-92 11-68 (71)
15 2ro1_A Transcription intermedi 99.1 4.1E-11 1.4E-15 98.3 3.2 48 40-90 2-49 (189)
16 1f62_A Transcription factor WS 99.0 6.6E-11 2.3E-15 78.5 2.0 46 42-89 2-49 (51)
17 4gne_A Histone-lysine N-methyl 99.0 1.6E-10 5.5E-15 89.2 4.3 52 36-90 11-62 (107)
18 2lbm_A Transcriptional regulat 99.0 1.9E-10 6.4E-15 92.9 3.9 74 36-116 59-139 (142)
19 2e6s_A E3 ubiquitin-protein li 98.9 5E-10 1.7E-14 81.6 4.3 47 39-88 25-75 (77)
20 3asl_A E3 ubiquitin-protein li 98.9 7.5E-10 2.6E-14 79.1 2.8 45 42-89 20-68 (70)
21 2k16_A Transcription initiatio 98.8 1.4E-09 4.9E-14 76.8 2.3 61 27-90 6-68 (75)
22 1wen_A Inhibitor of growth fam 98.8 5E-09 1.7E-13 75.2 5.2 59 29-91 5-66 (71)
23 2kwj_A Zinc finger protein DPF 98.8 2.2E-09 7.4E-14 81.8 3.2 47 41-90 59-108 (114)
24 2ysm_A Myeloid/lymphoid or mix 98.8 2.9E-09 9.8E-14 79.8 3.5 47 39-88 6-55 (111)
25 3shb_A E3 ubiquitin-protein li 98.8 3.7E-09 1.3E-13 77.3 3.7 45 42-88 28-75 (77)
26 3v43_A Histone acetyltransfera 98.8 3.5E-09 1.2E-13 80.3 3.3 45 42-89 63-111 (112)
27 3ask_A E3 ubiquitin-protein li 98.7 6.3E-09 2.2E-13 89.6 3.4 46 40-88 174-223 (226)
28 2ysm_A Myeloid/lymphoid or mix 98.7 7.2E-09 2.4E-13 77.7 2.3 48 42-91 56-105 (111)
29 3c6w_A P28ING5, inhibitor of g 98.7 5.4E-09 1.8E-13 72.6 1.5 51 36-90 5-58 (59)
30 3ql9_A Transcriptional regulat 98.6 4.6E-09 1.6E-13 83.8 0.8 55 33-90 50-111 (129)
31 2vnf_A ING 4, P29ING4, inhibit 98.6 1.1E-08 3.8E-13 71.0 1.5 52 35-90 5-59 (60)
32 2g6q_A Inhibitor of growth pro 98.5 2.6E-08 8.8E-13 69.8 1.5 52 35-90 6-60 (62)
33 1weu_A Inhibitor of growth fam 98.5 1E-07 3.4E-12 72.0 4.1 54 34-91 30-86 (91)
34 2lv9_A Histone-lysine N-methyl 98.3 1.1E-06 3.7E-11 65.8 6.5 43 45-91 35-77 (98)
35 2jmi_A Protein YNG1, ING1 homo 98.2 7E-07 2.4E-11 67.2 3.3 50 35-88 21-74 (90)
36 2kwj_A Zinc finger protein DPF 98.1 3.4E-07 1.1E-11 69.7 0.5 45 41-88 2-59 (114)
37 3v43_A Histone acetyltransfera 97.9 1.2E-06 4.1E-11 66.3 0.1 47 39-88 4-62 (112)
38 1x4i_A Inhibitor of growth pro 97.9 7.3E-06 2.5E-10 58.5 2.9 49 38-90 4-55 (70)
39 1wil_A KIAA1045 protein; ring 97.8 4.8E-06 1.6E-10 63.7 1.4 50 36-88 11-74 (89)
40 2ri7_A Nucleosome-remodeling f 97.7 5E-06 1.7E-10 65.7 0.6 51 38-92 6-61 (174)
41 1wew_A DNA-binding family prot 97.7 2.5E-05 8.4E-10 56.1 3.7 57 33-91 9-73 (78)
42 1we9_A PHD finger family prote 97.6 2.4E-05 8.2E-10 53.5 2.3 53 38-92 4-60 (64)
43 1wee_A PHD finger family prote 97.6 6.7E-05 2.3E-09 52.8 4.3 51 37-90 13-66 (72)
44 2rsd_A E3 SUMO-protein ligase 97.5 9.2E-05 3.2E-09 51.8 3.8 52 39-92 9-67 (68)
45 2xb1_A Pygopus homolog 2, B-ce 97.4 5.1E-05 1.7E-09 57.5 2.4 56 40-97 3-68 (105)
46 3o70_A PHD finger protein 13; 97.1 0.0003 1E-08 49.8 3.5 52 35-90 14-67 (68)
47 1wem_A Death associated transc 97.1 0.00016 5.5E-09 51.1 1.4 49 39-90 15-70 (76)
48 3o7a_A PHD finger protein 13 v 96.7 0.00096 3.3E-08 44.4 2.9 46 39-88 3-50 (52)
49 1wep_A PHF8; structural genomi 96.3 0.0015 5.1E-08 46.6 1.8 50 39-91 11-64 (79)
50 2vpb_A Hpygo1, pygopus homolog 96.3 0.00062 2.1E-08 47.9 -0.2 49 39-88 7-64 (65)
51 2kgg_A Histone demethylase jar 96.0 0.0016 5.4E-08 43.4 0.6 46 42-88 4-52 (52)
52 3lqh_A Histone-lysine N-methyl 95.4 0.0069 2.4E-07 50.1 2.6 52 41-94 3-67 (183)
53 3kqi_A GRC5, PHD finger protei 94.5 0.0083 2.8E-07 42.4 0.5 44 44-90 13-61 (75)
54 3pur_A Lysine-specific demethy 94.4 0.02 6.9E-07 54.6 3.1 36 53-90 58-94 (528)
55 4bbq_A Lysine-specific demethy 94.3 0.012 4.2E-07 43.7 1.2 35 53-89 75-113 (117)
56 2d8s_A Cellular modulator of i 93.7 0.016 5.6E-07 41.5 0.7 53 38-92 13-69 (80)
57 1vyx_A ORF K3, K3RING; zinc-bi 93.5 0.0043 1.5E-07 42.5 -2.5 51 39-91 5-57 (60)
58 4gne_A Histone-lysine N-methyl 93.5 0.043 1.5E-06 42.1 2.8 42 39-84 57-98 (107)
59 3kv5_D JMJC domain-containing 92.1 0.031 1.1E-06 52.1 0.3 48 39-90 36-88 (488)
60 3a1b_A DNA (cytosine-5)-methyl 91.9 0.035 1.2E-06 45.8 0.5 53 37-90 76-134 (159)
61 2pv0_B DNA (cytosine-5)-methyl 89.7 0.063 2.2E-06 49.4 0.0 53 37-90 90-148 (386)
62 3kv4_A PHD finger protein 8; e 87.9 0.066 2.3E-06 49.6 -1.2 45 44-91 8-57 (447)
63 2lq6_A Bromodomain-containing 83.5 0.38 1.3E-05 35.3 1.3 31 40-71 17-49 (87)
64 2d8y_A Eplin protein; LIM doma 79.5 3 0.0001 29.1 4.7 52 34-90 9-72 (91)
65 3nw0_A Non-structural maintena 78.4 0.44 1.5E-05 40.3 0.1 44 40-90 180-226 (238)
66 2ct0_A Non-SMC element 1 homol 77.5 0.6 2E-05 33.4 0.6 48 39-90 14-61 (74)
67 2ku7_A MLL1 PHD3-CYP33 RRM chi 77.4 0.57 1.9E-05 33.7 0.4 35 53-89 2-43 (140)
68 2ect_A Ring finger protein 126 77.1 1.6 5.6E-05 29.2 2.6 48 36-90 11-61 (78)
69 2l4z_A DNA endonuclease RBBP8, 77.0 5.4 0.00019 29.9 5.8 51 36-90 57-120 (123)
70 1x62_A C-terminal LIM domain p 76.3 2.4 8.3E-05 28.8 3.4 49 38-91 13-72 (79)
71 2ea5_A Cell growth regulator w 72.4 1.6 5.4E-05 29.8 1.7 51 26-90 2-55 (68)
72 3rsn_A SET1/ASH2 histone methy 72.1 2.7 9.4E-05 35.0 3.3 43 46-90 10-59 (177)
73 2dj7_A Actin-binding LIM prote 71.2 3.9 0.00013 28.2 3.5 53 34-91 9-72 (80)
74 2kiz_A E3 ubiquitin-protein li 71.2 0.91 3.1E-05 29.7 0.2 48 36-90 10-60 (69)
75 1iym_A EL5; ring-H2 finger, ub 70.4 1.7 5.9E-05 27.0 1.4 46 39-90 4-52 (55)
76 2ecj_A Tripartite motif-contai 69.6 1.7 5.9E-05 27.1 1.2 45 37-87 12-58 (58)
77 2d8t_A Dactylidin, ring finger 68.6 2.1 7.2E-05 28.4 1.5 48 36-92 11-60 (71)
78 2co8_A NEDD9 interacting prote 68.4 7.9 0.00027 26.6 4.6 51 35-90 10-74 (82)
79 2ecm_A Ring finger and CHY zin 67.7 1.3 4.3E-05 27.6 0.3 47 38-90 3-52 (55)
80 2ecw_A Tripartite motif-contai 67.2 1.5 5.1E-05 29.1 0.6 51 36-91 15-69 (85)
81 2d8v_A Zinc finger FYVE domain 64.1 2.7 9.2E-05 30.6 1.5 33 39-92 7-39 (67)
82 2yur_A Retinoblastoma-binding 63.9 2.2 7.5E-05 28.7 0.9 50 35-90 10-61 (74)
83 1x4j_A Ring finger protein 38; 63.3 1.5 5.3E-05 29.2 0.1 46 38-90 21-69 (75)
84 1v87_A Deltex protein 2; ring- 63.3 1.4 4.9E-05 31.5 -0.1 31 60-90 60-91 (114)
85 2ea6_A Ring finger protein 4; 61.4 2.3 7.7E-05 27.3 0.6 48 36-90 11-65 (69)
86 1x64_A Alpha-actinin-2 associa 60.4 7.2 0.00025 27.0 3.1 50 37-91 22-82 (89)
87 1a7i_A QCRP2 (LIM1); LIM domai 60.0 2.8 9.5E-05 28.4 0.9 51 39-94 6-68 (81)
88 2ecv_A Tripartite motif-contai 56.6 2.9 0.0001 27.6 0.5 51 36-91 15-69 (85)
89 2ysl_A Tripartite motif-contai 56.1 6.1 0.00021 25.7 2.1 51 36-90 16-66 (73)
90 2cur_A Skeletal muscle LIM-pro 54.2 9.4 0.00032 24.9 2.7 49 38-91 3-62 (69)
91 2ysj_A Tripartite motif-contai 53.7 2.5 8.5E-05 27.2 -0.2 46 36-87 16-63 (63)
92 2egp_A Tripartite motif-contai 53.0 5.5 0.00019 26.3 1.4 49 38-91 10-63 (79)
93 1x61_A Thyroid receptor intera 51.8 10 0.00035 24.8 2.6 48 38-90 3-63 (72)
94 2ep4_A Ring finger protein 24; 51.3 3.8 0.00013 27.0 0.4 48 36-90 11-61 (74)
95 4a0k_B E3 ubiquitin-protein li 51.2 3.7 0.00013 31.4 0.4 51 39-93 47-112 (117)
96 1t1h_A Gspef-atpub14, armadill 49.9 4 0.00014 27.2 0.3 48 37-91 5-53 (78)
97 2dar_A PDZ and LIM domain prot 49.6 15 0.0005 25.4 3.2 49 38-91 23-82 (90)
98 2ecn_A Ring finger protein 141 49.1 4.5 0.00015 26.4 0.5 45 37-90 12-57 (70)
99 2l0b_A E3 ubiquitin-protein li 48.6 4.6 0.00016 28.2 0.5 46 38-90 38-86 (91)
100 1g47_A Pinch protein; LIM doma 48.4 11 0.00037 24.9 2.3 49 38-91 9-70 (77)
101 2ecl_A Ring-box protein 2; RNF 47.9 3.9 0.00013 28.2 0.1 46 39-90 14-73 (81)
102 3ztg_A E3 ubiquitin-protein li 47.3 3 0.0001 28.7 -0.7 52 34-91 7-60 (92)
103 1bor_A Transcription factor PM 46.3 12 0.00042 23.8 2.3 40 39-90 5-46 (56)
104 2ecy_A TNF receptor-associated 46.1 2.9 9.8E-05 27.2 -0.9 47 36-90 11-59 (66)
105 2k1p_A Zinc finger RAN-binding 45.2 6.5 0.00022 24.1 0.8 12 79-90 4-15 (33)
106 2yqp_A Probable ATP-dependent 45.2 25 0.00085 25.1 3.8 27 29-58 9-35 (60)
107 2ko5_A Ring finger protein Z; 44.1 5.1 0.00017 31.0 0.2 44 39-90 27-70 (99)
108 2d8x_A Protein pinch; LIM doma 43.0 14 0.00047 24.1 2.1 49 38-91 3-62 (70)
109 2lk0_A RNA-binding protein 5; 43.0 5.7 0.00019 24.2 0.2 12 79-90 3-14 (32)
110 2cu8_A Cysteine-rich protein 2 42.8 20 0.00067 23.8 2.9 47 39-90 8-67 (76)
111 2d9g_A YY1-associated factor 2 42.3 11 0.00037 25.5 1.6 20 73-92 3-22 (53)
112 2d8z_A Four and A half LIM dom 41.9 22 0.00076 23.0 3.0 47 39-90 4-61 (70)
113 2ckl_B Ubiquitin ligase protei 41.8 4.4 0.00015 31.0 -0.5 48 39-91 53-100 (165)
114 1x4l_A Skeletal muscle LIM-pro 41.6 18 0.00062 23.6 2.6 49 38-90 3-65 (72)
115 3l11_A E3 ubiquitin-protein li 41.6 4.1 0.00014 29.3 -0.7 50 36-93 11-62 (115)
116 1v5n_A PDI-like hypothetical p 39.9 8.6 0.0003 27.9 0.8 33 40-74 47-80 (89)
117 3dpl_R Ring-box protein 1; ubi 39.8 5.5 0.00019 29.6 -0.3 27 60-90 72-98 (106)
118 2djb_A Polycomb group ring fin 38.6 7.7 0.00026 25.6 0.4 49 36-90 11-59 (72)
119 1ptq_A Protein kinase C delta 38.3 19 0.00064 22.5 2.2 31 40-73 11-46 (50)
120 1chc_A Equine herpes virus-1 r 37.9 5 0.00017 25.9 -0.6 46 39-90 4-49 (68)
121 1faq_A RAF-1; transferase, ser 36.5 21 0.00071 22.6 2.2 31 40-73 14-45 (52)
122 2enz_A NPKC-theta, protein kin 35.8 53 0.0018 21.9 4.2 31 39-72 22-57 (65)
123 1wyh_A SLIM 2, skeletal muscle 35.1 15 0.00052 23.9 1.4 48 39-91 4-64 (72)
124 2ct2_A Tripartite motif protei 35.1 10 0.00035 25.4 0.5 52 36-90 11-65 (88)
125 4b6d_A RAC GTPase-activating p 32.8 21 0.00071 24.4 1.8 33 38-72 17-52 (61)
126 2yuu_A NPKC-delta, protein kin 32.3 41 0.0014 23.5 3.3 31 39-72 27-62 (83)
127 1zbd_B Rabphilin-3A; G protein 31.8 16 0.00056 28.5 1.3 52 38-91 53-108 (134)
128 4hn5_A Glucocorticoid receptor 31.7 9.2 0.00031 29.6 -0.2 53 39-93 28-93 (117)
129 2cup_A Skeletal muscle LIM-pro 31.6 25 0.00087 24.3 2.1 50 37-91 2-64 (101)
130 2yho_A E3 ubiquitin-protein li 31.4 6.2 0.00021 27.4 -1.1 39 39-90 17-58 (79)
131 1g25_A CDK-activating kinase a 31.1 9.5 0.00032 24.6 -0.2 48 39-90 2-52 (65)
132 4esj_A Type-2 restriction enzy 30.4 18 0.0006 32.0 1.4 13 77-89 52-64 (257)
133 2eli_A Protein kinase C alpha 30.2 51 0.0017 23.3 3.6 31 39-72 27-62 (85)
134 3f6q_B LIM and senescent cell 30.2 31 0.0011 22.0 2.3 48 38-89 9-68 (72)
135 3uej_A NPKC-delta, protein kin 30.0 25 0.00086 23.4 1.8 32 39-73 19-55 (65)
136 2xeu_A Ring finger protein 4; 29.0 6.6 0.00023 24.7 -1.2 45 39-90 2-53 (64)
137 3ng2_A RNF4, snurf, ring finge 28.7 8.8 0.0003 24.7 -0.6 46 38-90 8-60 (71)
138 1x4k_A Skeletal muscle LIM-pro 28.4 34 0.0011 22.2 2.2 48 39-90 4-63 (72)
139 2csy_A Zinc finger protein 183 28.4 18 0.00062 24.2 0.9 47 38-91 13-59 (81)
140 1x68_A FHL5 protein; four-and- 28.2 34 0.0011 22.7 2.2 47 40-91 5-66 (76)
141 2ehe_A Four and A half LIM dom 27.4 27 0.00091 23.4 1.6 48 40-92 15-75 (82)
142 1wig_A KIAA1808 protein; LIM d 27.3 34 0.0012 22.8 2.1 46 40-90 5-62 (73)
143 2jtn_A LIM domain-binding prot 27.0 62 0.0021 25.0 3.9 51 37-91 57-117 (182)
144 3dzy_A Retinoic acid receptor 26.2 7.3 0.00025 35.5 -1.9 53 37-91 134-199 (467)
145 1weo_A Cellulose synthase, cat 25.4 19 0.00064 27.6 0.6 50 34-88 10-65 (93)
146 4ic3_A E3 ubiquitin-protein li 24.7 9.6 0.00033 25.7 -1.1 40 39-90 23-64 (74)
147 1nyp_A Pinch protein; LIM doma 24.2 33 0.0011 21.9 1.6 46 40-90 5-61 (66)
148 3t6p_A Baculoviral IAP repeat- 23.6 29 0.001 30.7 1.5 40 39-90 294-335 (345)
149 1iml_A CRIP, cysteine rich int 23.5 26 0.00087 23.2 0.9 44 42-90 2-58 (76)
150 1e8j_A Rubredoxin; iron-sulfur 23.3 35 0.0012 22.8 1.6 18 74-91 28-46 (52)
151 2rgt_A Fusion of LIM/homeobox 23.0 43 0.0015 25.6 2.2 49 39-91 5-63 (169)
152 3kzq_A Putative uncharacterize 22.7 33 0.0011 26.4 1.5 11 80-90 9-19 (208)
153 2db6_A SH3 and cysteine rich d 22.4 35 0.0012 23.5 1.5 31 39-72 27-62 (74)
154 3g9m_A Glucocorticoid receptor 22.3 15 0.00051 26.8 -0.5 51 41-93 3-66 (90)
155 1a6y_A Orphan nuclear receptor 22.3 13 0.00044 27.6 -0.9 50 41-92 8-71 (94)
156 2in3_A Hypothetical protein; D 22.2 33 0.0011 26.1 1.4 16 75-90 9-24 (216)
157 3bci_A Disulfide bond protein 21.5 17 0.00059 27.3 -0.3 17 74-90 13-29 (186)
158 2enn_A NPKC-theta, protein kin 20.9 44 0.0015 23.2 1.7 32 38-72 32-68 (77)
159 3lrq_A E3 ubiquitin-protein li 20.6 9.5 0.00032 27.0 -1.8 49 39-92 21-69 (100)
160 1n0z_A ZNF265; zinc finger, RN 20.2 31 0.001 22.5 0.7 13 78-90 11-25 (45)
161 4dvc_A Thiol:disulfide interch 20.2 35 0.0012 24.8 1.1 15 74-88 23-37 (184)
162 3gj5_B Nuclear pore complex pr 20.2 17 0.00057 22.9 -0.6 16 78-93 4-19 (34)
163 2v3b_B Rubredoxin 2, rubredoxi 20.1 34 0.0012 23.1 1.0 18 75-92 29-47 (55)
No 1
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.37 E-value=2.5e-13 Score=95.36 Aligned_cols=53 Identities=28% Similarity=0.563 Sum_probs=48.4
Q ss_pred CCCCCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchhh
Q 041295 36 DLLEEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 36 d~~neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykk 91 (209)
...+++.|.+|+.+|+ ||+|+ +||.+||..|+++++...+.|.||||.|..++
T Consensus 4 ~~~~~~~C~vC~~~g~-ll~CD--~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~ 56 (66)
T 1xwh_A 4 AQKNEDECAVCRDGGE-LICCD--GCPRAFHLACLSPPLREIPSGTWRCSSCLQAT 56 (66)
T ss_dssp CCSCCCSBSSSSCCSS-CEECS--SCCCEECTTTSSSCCSSCCSSCCCCHHHHHTC
T ss_pred CCCCCCCCccCCCCCC-EEEcC--CCChhhcccccCCCcCcCCCCCeECccccCcc
Confidence 3458899999999999 99999 99999999999998888899999999998654
No 2
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.33 E-value=5e-13 Score=91.92 Aligned_cols=51 Identities=27% Similarity=0.549 Sum_probs=47.0
Q ss_pred CCCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchhh
Q 041295 38 LEEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 38 ~neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykk 91 (209)
.+++.|.+|+..|+ ||.|+ +||.+||..|+++++...|.|.||||.|..+.
T Consensus 3 ~~~~~C~vC~~~g~-ll~Cd--~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 53 (60)
T 2puy_A 3 IHEDFCSVCRKSGQ-LLMCD--TCSRVYHLDCLDPPLKTIPKGMWICPRCQDQM 53 (60)
T ss_dssp CCCSSCTTTCCCSS-CEECS--SSSCEECGGGSSSCCSSCCCSCCCCHHHHHHH
T ss_pred CCCCCCcCCCCCCc-EEEcC--CCCcCEECCcCCCCcCCCCCCceEChhccChh
Confidence 37899999999999 99999 99999999999999998999999999997543
No 3
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.32 E-value=1.3e-12 Score=98.45 Aligned_cols=55 Identities=15% Similarity=0.272 Sum_probs=49.4
Q ss_pred cCCCCCCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchhh
Q 041295 34 DVDLLEEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 34 ~~d~~neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykk 91 (209)
.....+++.|.+|+.+|+ ||+|+ +||.+||..|+.+++...|.|+||||.|.+..
T Consensus 19 ~~~d~n~~~C~vC~~~g~-LL~CD--~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 19 GTLDDSATICRVCQKPGD-LVMCN--QCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp CSSSSSSSCCSSSCSSSC-CEECT--TSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred cccCCCCCcCcCcCCCCC-EEECC--CCCCceecccCCCCCCCCcCCCcCCccccCCC
Confidence 344458899999999999 99999 99999999999999999999999999998653
No 4
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.31 E-value=1e-12 Score=91.32 Aligned_cols=51 Identities=31% Similarity=0.526 Sum_probs=47.1
Q ss_pred CCCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchhh
Q 041295 38 LEEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 38 ~neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykk 91 (209)
.+++.|.+|+.+|+ ||+|+ +|+.+||..|+.+++...+.|+||||.|..+.
T Consensus 7 ~~~~~C~vC~~~g~-ll~Cd--~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 7 HHMEFCRVCKDGGE-LLCCD--TCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp SSCSSCTTTCCCSS-CBCCS--SSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred CCCCcCCCCCCCCC-EEEcC--CCCHHHcccccCCCcCcCCCCccCChhhcCch
Confidence 47899999999999 99999 99999999999998888999999999998653
No 5
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=1e-12 Score=89.45 Aligned_cols=50 Identities=28% Similarity=0.494 Sum_probs=46.3
Q ss_pred CCCCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccch
Q 041295 37 LLEEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWY 89 (209)
Q Consensus 37 ~~neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~y 89 (209)
..+++.|.+|+..|+ ||.|+ +||.+||..|+.+++...+.|.||||.|..
T Consensus 6 ~~~~~~C~vC~~~g~-ll~Cd--~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 6 SGHEDFCSVCRKSGQ-LLMCD--TCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CSSCCSCSSSCCSSC-CEECS--SSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCCCccCCCCCe-EEEcC--CCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 457899999999999 99999 999999999999999989999999999963
No 6
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.29 E-value=1.5e-12 Score=90.46 Aligned_cols=51 Identities=24% Similarity=0.524 Sum_probs=46.8
Q ss_pred CCCCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 37 LLEEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 37 ~~neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
..+++.|.+|+.+|+ ||.|+ +||.+||..|++.+++..+.|.||||.|..+
T Consensus 8 ~~~~~~C~vC~~~g~-ll~CD--~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 8 TDHQDYCEVCQQGGE-IILCD--TCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp SCCCSSCTTTSCCSS-EEECS--SSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCCCccCCCCCc-EEECC--CCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 347889999999999 99999 9999999999999888889999999999864
No 7
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.26 E-value=2e-12 Score=92.01 Aligned_cols=51 Identities=20% Similarity=0.320 Sum_probs=46.4
Q ss_pred CCCCCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccch
Q 041295 36 DLLEEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWY 89 (209)
Q Consensus 36 d~~neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~y 89 (209)
.+.+...|.+|+.+|+ ||+|+ +|+.+||..|+.+++...+.|+||||.|.-
T Consensus 8 ~~~~~~~C~vC~~~~~-ll~Cd--~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~ 58 (66)
T 2lri_C 8 NLAPGARCGVCGDGTD-VLRCT--HCAAAFHWRCHFPAGTSRPGTGLRCRSCSG 58 (66)
T ss_dssp CCCTTCCCTTTSCCTT-CEECS--SSCCEECHHHHCTTTCCCCSSSCCCTTTTT
T ss_pred CCCCCCCcCCCCCCCe-EEECC--CCCCceecccCCCccCcCCCCCEECccccC
Confidence 3446778999999999 99999 999999999999999999999999999964
No 8
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.24 E-value=4.5e-12 Score=94.53 Aligned_cols=62 Identities=29% Similarity=0.464 Sum_probs=52.0
Q ss_pred CCCCCCcccCCCCCCCceeeccCCCC--eEEeeCCCCCcccccccccCCCCccCCCCCccccccch
Q 041295 26 SGRSRDFMDVDLLEEEPCIKCNRRDE--SLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWY 89 (209)
Q Consensus 26 S~~S~Ds~~~d~~neD~CikC~kdGq--~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~y 89 (209)
|+-+.........+++.|.+|+..+. .||+|+ +|+.+||..|+++++...|.|.||||.|..
T Consensus 2 ~~~~~~~s~~~~~~~~~C~vC~~~~~~~~ll~CD--~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~ 65 (92)
T 2e6r_A 2 SSGSSGHSSAQFIDSYICQVCSRGDEDDKLLFCD--GCDDNYHIFCLLPPLPEIPRGIWRCPKCIL 65 (92)
T ss_dssp CCSSCCCCCCCCCCCCCCSSSCCSGGGGGCEECT--TTCCEECSSSSSSCCSSCCSSCCCCHHHHH
T ss_pred CCCCCCCchhhccCCCCCccCCCcCCCCCEEEcC--CCCchhccccCCCCcccCCCCCcCCccCcC
Confidence 44444445566678899999999873 299999 999999999999999999999999999964
No 9
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=99.23 E-value=4e-12 Score=102.32 Aligned_cols=51 Identities=25% Similarity=0.494 Sum_probs=47.5
Q ss_pred CCCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchhh
Q 041295 38 LEEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 38 ~neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykk 91 (209)
.|++.|.+|+.+|+ ||+|+ +||.+||..|+.+++...+.|.|+||.|.-..
T Consensus 2 ~~~~~C~~C~~~g~-ll~Cd--~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 2 PNEDWCAVCQNGGE-LLCCE--KCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp CSCSSCTTTCCCSS-CEECS--SSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCccccCCCCCe-eeecC--CCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 37899999999999 99999 99999999999998998999999999998764
No 10
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=99.22 E-value=2.3e-12 Score=89.14 Aligned_cols=55 Identities=18% Similarity=0.407 Sum_probs=47.2
Q ss_pred CCCCCCceeeccCC-----CCeEEeeCCCCCcccccccccCCCCcc---CCCCCccccccchhhHH
Q 041295 36 DLLEEEPCIKCNRR-----DESLLVCIQSGCPISVHENCLSCGVKS---DDVGNIYCPYFWYKCEL 93 (209)
Q Consensus 36 d~~neD~CikC~kd-----Gq~LL~Cs~~gCPlAvH~kClg~sl~~---dd~GnfYCPyC~ykka~ 93 (209)
++.+++.|.+|+.+ ++ ||+|+ +|+.+||..|+++++.. .+.|.||||.|..+.+.
T Consensus 2 ~~~~~~~C~vC~~~~~~~~~~-ll~Cd--~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~~ 64 (66)
T 2yt5_A 2 SSGSSGVCTICQEEYSEAPNE-MVICD--KCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTT 64 (66)
T ss_dssp CCCCCCCBSSSCCCCCBTTBC-EEECS--SSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTSC
T ss_pred CCCCCCCCCCCCCCCCCCCCC-EEECC--CCChHHHhhhCCCcccccccCCCCCEECCCCcCcccc
Confidence 35688999999987 67 99999 99999999999987664 38999999999876543
No 11
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=99.21 E-value=5.9e-12 Score=103.44 Aligned_cols=53 Identities=25% Similarity=0.439 Sum_probs=48.4
Q ss_pred CCCCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchhhH
Q 041295 37 LLEEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKCE 92 (209)
Q Consensus 37 ~~neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykka 92 (209)
..+++.|.+|+.+|+ ||+|+ +||.+||..|+.+++...|.|+||||.|.-...
T Consensus 4 d~~~~~C~~C~~~g~-ll~Cd--~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 56 (207)
T 3u5n_A 4 DPNEDWCAVCQNGGD-LLCCE--KCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK 56 (207)
T ss_dssp CSSCSSBTTTCCCEE-EEECS--SSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCCCCCCCCCCCc-eEEcC--CCCCccCCccCCCCCCCCCCCCEEeCceeCccc
Confidence 347899999999999 99999 999999999999999999999999999987543
No 12
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.15 E-value=1.4e-11 Score=91.39 Aligned_cols=52 Identities=21% Similarity=0.411 Sum_probs=44.8
Q ss_pred CCCCCCceeeccCCC-----CeEEeeCCCCCcccccccccCCCCccCCCCCccccccchhhH
Q 041295 36 DLLEEEPCIKCNRRD-----ESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKCE 92 (209)
Q Consensus 36 d~~neD~CikC~kdG-----q~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykka 92 (209)
..-+++.|.+|+.+| + ||+|+ +|+++||..|++.+ ..|.|.||||.|.....
T Consensus 21 ~~~~~~~C~vC~~~~s~~~~~-ll~CD--~C~~~fH~~Cl~p~--~vP~g~W~C~~C~~~~~ 77 (88)
T 2l43_A 21 LIDEDAVCSICMDGESQNSNV-ILFCD--MCNLAVHQECYGVP--YIPEGQWLCRHCLQSRA 77 (88)
T ss_dssp CCCCCCCCSSCCSSSSCSEEE-EEECS--SSCCCCCHHHHTCS--SCCSSCCCCHHHHHHTT
T ss_pred cCCCCCcCCcCCCCCCCCCCC-EEECC--CCCchhhcccCCCC--ccCCCceECccccCccc
Confidence 344789999999987 6 99999 99999999999965 47889999999987643
No 13
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.14 E-value=1.2e-11 Score=91.51 Aligned_cols=51 Identities=22% Similarity=0.438 Sum_probs=44.7
Q ss_pred CCCceeeccCC-----CCeEEeeCCCCCcccccccccCCCCcc----CCCCCccccccchhhH
Q 041295 39 EEEPCIKCNRR-----DESLLVCIQSGCPISVHENCLSCGVKS----DDVGNIYCPYFWYKCE 92 (209)
Q Consensus 39 neD~CikC~kd-----Gq~LL~Cs~~gCPlAvH~kClg~sl~~----dd~GnfYCPyC~ykka 92 (209)
+++.|.+|+.. ++ ||+|+ +|+.+||..|+.+++.- .+.|.||||.|..+..
T Consensus 15 ~~~~C~vC~~~~~~~~~~-ll~CD--~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~ 74 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQ-LVECQ--ECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp HCCSCSSSCCCCCCTTCC-EEECS--SSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CCCcCCCCCCCCCCCCCc-eEECC--CCCCeEcCccCCCcccccccCCCCCCeeCccccchhh
Confidence 67899999987 56 99999 99999999999987773 7999999999986544
No 14
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.14 E-value=1.5e-11 Score=88.46 Aligned_cols=53 Identities=21% Similarity=0.397 Sum_probs=45.1
Q ss_pred CCCCCCCceeeccCCC-----CeEEeeCCCCCcccccccccCCCCccCCCCCccccccchhhH
Q 041295 35 VDLLEEEPCIKCNRRD-----ESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKCE 92 (209)
Q Consensus 35 ~d~~neD~CikC~kdG-----q~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykka 92 (209)
....+++.|.+|+.++ + ||+|+ +|+++||..|++.+ ..|.|+||||.|..++.
T Consensus 11 ~~~~~~~~C~vC~~~~s~~~~~-ll~CD--~C~~~~H~~Cl~~~--~vP~g~W~C~~C~~~~~ 68 (71)
T 2ku3_A 11 SLIDEDAVCSICMDGESQNSNV-ILFCD--MCNLAVHQECYGVP--YIPEGQWLCRHCLQSRA 68 (71)
T ss_dssp CCCCSSCSCSSSCCCCCCSSSC-EEECS--SSCCEEEHHHHTCS--SCCSSCCCCHHHHHHHH
T ss_pred cCCCCCCCCCCCCCCCCCCCCC-EEECC--CCCCccccccCCCC--cCCCCCcCCccCcCcCc
Confidence 3445889999999876 5 99999 99999999999964 47899999999987653
No 15
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=99.08 E-value=4.1e-11 Score=98.33 Aligned_cols=48 Identities=17% Similarity=0.414 Sum_probs=45.3
Q ss_pred CCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 40 EEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 40 eD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
++.|.+|+.+|+ ||+|+ +||.+||..|+.+++...+.|+|+||.|..+
T Consensus 2 ~~~C~~C~~~g~-ll~Cd--~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 2 ATICRVCQKPGD-LVMCN--QCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CCCBTTTCCCSS-CCCCT--TTCCBCCSTTSTTCCSSCCCTTCCTTTTSCS
T ss_pred CCcCccCCCCCc-eeECC--CCCchhccccCCCCcccCCCCCCCCcCccCC
Confidence 578999999999 99999 9999999999998888889999999999876
No 16
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.02 E-value=6.6e-11 Score=78.46 Aligned_cols=46 Identities=26% Similarity=0.533 Sum_probs=40.5
Q ss_pred ceeeccCCCC--eEEeeCCCCCcccccccccCCCCccCCCCCccccccch
Q 041295 42 PCIKCNRRDE--SLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWY 89 (209)
Q Consensus 42 ~CikC~kdGq--~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~y 89 (209)
.|.+|+..|+ .||.|+ +|+.+||..|+.+++...|.|.||||.|..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd--~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCD--ECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECT--TTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECC--CCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 5889997652 299999 999999999999888888999999999963
No 17
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=99.02 E-value=1.6e-10 Score=89.23 Aligned_cols=52 Identities=27% Similarity=0.685 Sum_probs=46.0
Q ss_pred CCCCCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 36 DLLEEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 36 d~~neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
...+++.|.+|+.+|+ ||.|+..+||.+||..|++ +...+.|+||||.|...
T Consensus 11 ~~~~~~~C~~C~~~G~-ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~ 62 (107)
T 4gne_A 11 KQMHEDYCFQCGDGGE-LVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCD 62 (107)
T ss_dssp CCSSCSSCTTTCCCSE-EEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCT
T ss_pred cCCCCCCCCcCCCCCc-EeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCC
Confidence 3458999999999998 9999977899999999999 77788999999988643
No 18
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.99 E-value=1.9e-10 Score=92.94 Aligned_cols=74 Identities=16% Similarity=0.266 Sum_probs=56.7
Q ss_pred CCCCCCceeeccCCCCeEEeeCCCCCcccccccccCCCCc------c-CCCCCccccccchhhHHHHHHHHHHHHHHHHH
Q 041295 36 DLLEEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVK------S-DDVGNIYCPYFWYKCELMRTKELRKKAMETKK 108 (209)
Q Consensus 36 d~~neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~------~-dd~GnfYCPyC~ykka~eey~elkKkA~~AKK 108 (209)
+..+++.|.+|+.+|+ ||+|+ +||.+||..|+.+++. . .+.|+|+||.|..+.. ..+++...+.-+
T Consensus 59 ~Dg~~d~C~vC~~GG~-LlcCD--~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~pl----~~l~~~c~~~~~ 131 (142)
T 2lbm_A 59 SDGMDEQCRWCAEGGN-LICCD--FCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL----LDLVTACNSVFE 131 (142)
T ss_dssp TTSCBCSCSSSCCCSS-EEECS--SSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCCTT----HHHHHHHHHHHH
T ss_pred CCCCCCeecccCCCCc-EEeCC--CCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCccH----HHHHHHHHHHHH
Confidence 3557999999999999 99999 9999999999996654 1 5899999999986533 334555555555
Q ss_pred HHHhhcCC
Q 041295 109 QLACFIDP 116 (209)
Q Consensus 109 ~Ls~Fl~~ 116 (209)
.|..++.+
T Consensus 132 ~~~~~~~~ 139 (142)
T 2lbm_A 132 NLEQLLQQ 139 (142)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhc
Confidence 56665543
No 19
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.95 E-value=5e-10 Score=81.63 Aligned_cols=47 Identities=23% Similarity=0.480 Sum_probs=42.5
Q ss_pred CCCceeeccC---CCCeEEeeCCCCCcccccccccCCCCccCCCC-Cccccccc
Q 041295 39 EEEPCIKCNR---RDESLLVCIQSGCPISVHENCLSCGVKSDDVG-NIYCPYFW 88 (209)
Q Consensus 39 neD~CikC~k---dGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~G-nfYCPyC~ 88 (209)
.+..|.+|+. +|+ ||+|+ +|+.+||..|+.+++...|.| +||||.|.
T Consensus 25 ~~c~C~vC~~~~~~~~-ll~CD--~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~ 75 (77)
T 2e6s_A 25 HSCSCRVCGGKHEPNM-QLLCD--ECNVAYHIYCLNPPLDKVPEEEYWYCPSCK 75 (77)
T ss_dssp SSSSCSSSCCCCCSTT-EEECS--SSCCEEETTSSSSCCSSCCCSSCCCCTTTC
T ss_pred CCCCCcCcCCcCCCCC-EEEcC--CCCccccccccCCCccCCCCCCCcCCcCcc
Confidence 4558999996 556 99999 999999999999999999999 99999996
No 20
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.87 E-value=7.5e-10 Score=79.07 Aligned_cols=45 Identities=29% Similarity=0.595 Sum_probs=40.5
Q ss_pred ceeeccC---CCCeEEeeCCCCCcccccccccCCCCccCCCC-Cccccccch
Q 041295 42 PCIKCNR---RDESLLVCIQSGCPISVHENCLSCGVKSDDVG-NIYCPYFWY 89 (209)
Q Consensus 42 ~CikC~k---dGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~G-nfYCPyC~y 89 (209)
.|.+|+. +|+ ||.|+ +|+.+||..|+++++...|.| +||||.|.-
T Consensus 20 ~C~~C~~~~~~~~-ll~CD--~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQDPDK-QLMCD--ECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCSCGGG-EEECT--TTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCcCCCCC-EEEcC--CCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 7888995 455 99999 999999999999999999999 999999973
No 21
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.80 E-value=1.4e-09 Score=76.82 Aligned_cols=61 Identities=18% Similarity=0.177 Sum_probs=47.4
Q ss_pred CCCCCcccCCCCCCCceeeccCC--CCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 27 GRSRDFMDVDLLEEEPCIKCNRR--DESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 27 ~~S~Ds~~~d~~neD~CikC~kd--Gq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
.|++. ...+..+...|.+|+.. |..+|.|+ +|+..||..|++.++.-.+.+.||||.|..+
T Consensus 6 ~P~~~-~~~~~~~~~~C~~C~~~~~~~~mi~CD--~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~ 68 (75)
T 2k16_A 6 MAYVI-RDEWGNQIWICPGCNKPDDGSPMIGCD--DCDDWYHWPCVGIMAAPPEEMQWFCPKCANK 68 (75)
T ss_dssp SSSEE-ECSSSCEEECBTTTTBCCSSCCEEECS--SSSSEEEHHHHTCSSCCCSSSCCCCTTTHHH
T ss_pred CCCcc-ccccCCCCcCCCCCCCCCCCCCEEEcC--CCCcccccccCCCCccCCCCCCEEChhccCc
Confidence 34433 34445567789999986 42399999 9999999999998777777799999999754
No 22
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.80 E-value=5e-09 Score=75.21 Aligned_cols=59 Identities=27% Similarity=0.529 Sum_probs=47.1
Q ss_pred CCCcccCCCCCCCceeeccC--CCCeEEeeCCCCCcc-cccccccCCCCccCCCCCccccccchhh
Q 041295 29 SRDFMDVDLLEEEPCIKCNR--RDESLLVCIQSGCPI-SVHENCLSCGVKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 29 S~Ds~~~d~~neD~CikC~k--dGq~LL~Cs~~gCPl-AvH~kClg~sl~~dd~GnfYCPyC~ykk 91 (209)
+.+-.+.++.+...| +|+. .|. +|.|+.-.||+ .||..|++ ++-.+.|.||||.|..++
T Consensus 5 ~~~~~~~d~~~~~~C-~C~~~~~g~-MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 5 SSGDMPVDPNEPTYC-LCHQVSYGE-MIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 66 (71)
T ss_dssp CSSCCCCCTTSCCCS-TTCCCSCSS-EECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSCS
T ss_pred cccccccCCCCCCEE-ECCCCCCCC-EeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCccc
Confidence 444466777788899 5999 788 99999444995 99999999 566778999999997643
No 23
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.79 E-value=2.2e-09 Score=81.84 Aligned_cols=47 Identities=32% Similarity=0.663 Sum_probs=41.8
Q ss_pred CceeeccC---CCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 41 EPCIKCNR---RDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 41 D~CikC~k---dGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
..|.+|+. +++ ||.|+ +|+.+||..|+++++...|.|+||||.|...
T Consensus 59 ~~C~~C~~~~~~~~-ll~Cd--~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~ 108 (114)
T 2kwj_A 59 KSCILCGTSENDDQ-LLFCD--DCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 108 (114)
T ss_dssp CCCTTTTCCTTTTT-EEECS--SSCCEEETTTSSSCCSSCCSSCCCCHHHHHH
T ss_pred CccCcccccCCCCc-eEEcC--CCCccccccccCCCccCCCCCCeECccccch
Confidence 36888888 466 99999 9999999999999999999999999999643
No 24
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.78 E-value=2.9e-09 Score=79.83 Aligned_cols=47 Identities=23% Similarity=0.510 Sum_probs=42.8
Q ss_pred CCCceeeccCCCCeE---EeeCCCCCcccccccccCCCCccCCCCCccccccc
Q 041295 39 EEEPCIKCNRRDESL---LVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFW 88 (209)
Q Consensus 39 neD~CikC~kdGq~L---L~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ 88 (209)
+++.|.+|+..|+ | |.|+ +||.+||..|++.+..-.+.+.|+||.|.
T Consensus 6 ~~~~C~~C~~~g~-~~~ll~C~--~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 6 SGANCAVCDSPGD-LLDQFFCT--TCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCSCBTTTCCCCC-TTTSEECS--SSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCcCCCCCCC-CcCCeECC--CCCCCcChHHhCCccccccccCccCCcCC
Confidence 8999999999998 6 9999 99999999999987665678999999996
No 25
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.77 E-value=3.7e-09 Score=77.28 Aligned_cols=45 Identities=29% Similarity=0.642 Sum_probs=40.5
Q ss_pred ceeeccCCCCe--EEeeCCCCCcccccccccCCCCccCCCCC-ccccccc
Q 041295 42 PCIKCNRRDES--LLVCIQSGCPISVHENCLSCGVKSDDVGN-IYCPYFW 88 (209)
Q Consensus 42 ~CikC~kdGq~--LL~Cs~~gCPlAvH~kClg~sl~~dd~Gn-fYCPyC~ 88 (209)
.|.+|+..++. ||+|+ +|+.+||..|+.+++...+.|+ ||||.|.
T Consensus 28 ~C~vC~~~~d~~~ll~CD--~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~ 75 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCD--ECDMAFHIYCLDPPLSSVPSEDEWYCPECR 75 (77)
T ss_dssp SBTTTCCCSCGGGEEECT--TTCCEEETTTSSSCCSSCCSSSCCCCTTTC
T ss_pred cCCccCCCCCCcceeEeC--CCCCccCcccCCCcccCCCCCCceECcCcc
Confidence 78888886432 99999 9999999999999999999999 9999996
No 26
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.76 E-value=3.5e-09 Score=80.30 Aligned_cols=45 Identities=20% Similarity=0.459 Sum_probs=40.9
Q ss_pred ceeeccCCC----CeEEeeCCCCCcccccccccCCCCccCCCCCccccccch
Q 041295 42 PCIKCNRRD----ESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWY 89 (209)
Q Consensus 42 ~CikC~kdG----q~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~y 89 (209)
.|.+|+..| + ||.|+ +|+.+||..|+.+++...+.|+||||.|.-
T Consensus 63 ~C~vC~~~~~~~~~-ll~Cd--~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 TCSSCRDQGKNADN-MLFCD--SCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CBTTTCCCCCTTCC-CEECT--TTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccCcCCCccc-eEEcC--CCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 788998764 5 99999 999999999999999999999999999963
No 27
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.70 E-value=6.3e-09 Score=89.57 Aligned_cols=46 Identities=28% Similarity=0.556 Sum_probs=38.9
Q ss_pred CCceeeccC---CCCeEEeeCCCCCcccccccccCCCCccCCCC-Cccccccc
Q 041295 40 EEPCIKCNR---RDESLLVCIQSGCPISVHENCLSCGVKSDDVG-NIYCPYFW 88 (209)
Q Consensus 40 eD~CikC~k---dGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~G-nfYCPyC~ 88 (209)
+..|.+|+. +|+ ||+|+ +|+.+||..|+.+++...|.| +||||.|.
T Consensus 174 ~c~C~vC~~~~~~~~-lL~CD--~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~ 223 (226)
T 3ask_A 174 VCACHLCGGRQDPDK-QLMCD--ECDMAFHIYCLDPPLSSVPSEDEWYCPECR 223 (226)
T ss_dssp TTSCSSSCCCCC--C-CEECS--SSCCEECSCC--CCCCSCCSSSCCCCGGGC
T ss_pred CCCCcCCCCCCCCCC-eEEcC--CCCcceeCccCCCCcccCCCCCCCCCcCCc
Confidence 557999998 455 99999 999999999999999999999 99999996
No 28
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.66 E-value=7.2e-09 Score=77.67 Aligned_cols=48 Identities=27% Similarity=0.460 Sum_probs=42.9
Q ss_pred ceeeccCCCCe--EEeeCCCCCcccccccccCCCCccCCCCCccccccchhh
Q 041295 42 PCIKCNRRDES--LLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 42 ~CikC~kdGq~--LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykk 91 (209)
.|.+|++.++. ||.|+ .|+.+||..|+.+++...|.|+||||.|...+
T Consensus 56 ~C~~C~~~~~~~~ll~Cd--~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c~ 105 (111)
T 2ysm_A 56 VCQNCKQSGEDSKMLVCD--TCDKGYHTFCLQPVMKSVPTNGWKCKNCRICI 105 (111)
T ss_dssp CCTTTCCCSCCTTEEECS--SSCCEEEGGGSSSCCSSCCSSCCCCHHHHCCS
T ss_pred cccccCccCCCCCeeECC--CCCcHHhHHhcCCccccCCCCCcCCcCCcCcC
Confidence 78899987753 99999 99999999999999999999999999997654
No 29
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.66 E-value=5.4e-09 Score=72.58 Aligned_cols=51 Identities=25% Similarity=0.606 Sum_probs=39.8
Q ss_pred CCCCCCceeeccC--CCCeEEeeCCCCCcc-cccccccCCCCccCCCCCccccccchh
Q 041295 36 DLLEEEPCIKCNR--RDESLLVCIQSGCPI-SVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 36 d~~neD~CikC~k--dGq~LL~Cs~~gCPl-AvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
++.+...| +|++ .|+ ++.|+.-.||+ .||..|++ ++-.+.|.||||.|..+
T Consensus 5 d~~e~~yC-~C~~~~~g~-mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 5 GSNEPTYC-LCHQVSYGE-MIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQE 58 (59)
T ss_dssp ---CCEET-TTTEECCSE-EEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHCC
T ss_pred CCCCCcEE-ECCCCCCCC-eeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccCc
Confidence 44466778 7999 787 99999444995 99999999 56677899999999754
No 30
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=98.64 E-value=4.6e-09 Score=83.76 Aligned_cols=55 Identities=18% Similarity=0.332 Sum_probs=45.4
Q ss_pred ccCCCCCCCceeeccCCCCeEEeeCCCCCcccccccccCCCC------cc-CCCCCccccccchh
Q 041295 33 MDVDLLEEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGV------KS-DDVGNIYCPYFWYK 90 (209)
Q Consensus 33 ~~~d~~neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl------~~-dd~GnfYCPyC~yk 90 (209)
.-.+..+++.|.+|+.+|+ ||+|+ .||++||.+|+.+.+ .. .+.+.|+|+.|.-+
T Consensus 50 ~~d~Dg~~~~C~vC~dGG~-LlcCd--~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 50 SRDSDGMDEQCRWCAEGGN-LICCD--FCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp CBCTTSCBSSCTTTCCCSE-EEECS--SSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred ccCCCCCCCcCeecCCCCe-eEecC--CCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 3444668899999999999 99999 999999999998542 12 47999999999754
No 31
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.59 E-value=1.1e-08 Score=70.95 Aligned_cols=52 Identities=25% Similarity=0.549 Sum_probs=39.1
Q ss_pred CCCCCCCceeeccC--CCCeEEeeCCCCCc-ccccccccCCCCccCCCCCccccccchh
Q 041295 35 VDLLEEEPCIKCNR--RDESLLVCIQSGCP-ISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 35 ~d~~neD~CikC~k--dGq~LL~Cs~~gCP-lAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
.++-+...| +|++ .|. +|.|++-.|| ..||..|++ ++-.+.|.||||.|..+
T Consensus 5 ~d~~e~~~C-~C~~~~~g~-mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 5 VDPNEPTYC-LCHQVSYGE-MIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQE 59 (60)
T ss_dssp ----CCEET-TTTEECCSE-EEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC-
T ss_pred cCCCCCCEE-ECCCcCCCC-EEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccCc
Confidence 344466778 6998 777 9999944499 589999999 56677899999999754
No 32
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.50 E-value=2.6e-08 Score=69.85 Aligned_cols=52 Identities=31% Similarity=0.607 Sum_probs=39.8
Q ss_pred CCCCCCCceeeccC--CCCeEEeeCCCCCc-ccccccccCCCCccCCCCCccccccchh
Q 041295 35 VDLLEEEPCIKCNR--RDESLLVCIQSGCP-ISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 35 ~d~~neD~CikC~k--dGq~LL~Cs~~gCP-lAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
.++-+...| +|++ .|. ++.|+.-.|| ..||..|++ ++-.+.|.||||.|..+
T Consensus 6 ~d~~e~~yC-~C~~~~~g~-MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 6 IDPNEPTYC-LCNQVSYGE-MIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGD 60 (62)
T ss_dssp ----CCEET-TTTEECCSE-EEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHTC
T ss_pred cCCCCCcEE-ECCCCCCCC-eeeeeCCCCCcccEecccCC--cCcCCCCCEECcCcccC
Confidence 344466778 7999 787 9999944499 799999999 45567899999999754
No 33
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.47 E-value=1e-07 Score=71.97 Aligned_cols=54 Identities=24% Similarity=0.525 Sum_probs=42.8
Q ss_pred cCCCCCCCceeeccC--CCCeEEeeCCCCCc-ccccccccCCCCccCCCCCccccccchhh
Q 041295 34 DVDLLEEEPCIKCNR--RDESLLVCIQSGCP-ISVHENCLSCGVKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 34 ~~d~~neD~CikC~k--dGq~LL~Cs~~gCP-lAvH~kClg~sl~~dd~GnfYCPyC~ykk 91 (209)
+.+.-+...| +|++ .|. +|.|+.-.|| -.||..|++ ++-.+.|.||||.|..++
T Consensus 30 ~~d~~e~~yC-iC~~~~~g~-MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 30 PVDPNEPTYC-LCHQVSYGE-MIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 86 (91)
T ss_dssp CCCSCCCBCS-TTCCBCCSC-CCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCCC
T ss_pred CcCCCCCcEE-ECCCCCCCC-EeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCcC
Confidence 4455567778 8999 787 9999944499 489999999 555678999999997653
No 34
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.32 E-value=1.1e-06 Score=65.84 Aligned_cols=43 Identities=12% Similarity=0.265 Sum_probs=33.7
Q ss_pred eccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchhh
Q 041295 45 KCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 45 kC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykk 91 (209)
++..+|. ||.|+ .|+..||..|++.+..-.+ ..||||.|.-+.
T Consensus 35 ~~~~~~~-mi~Cd--~C~~w~H~~C~~~~~~~~p-~~w~C~~C~~~~ 77 (98)
T 2lv9_A 35 FTHDDGY-MICCD--KCSVWQHIDCMGIDRQHIP-DTYLCERCQPRN 77 (98)
T ss_dssp CCSCSSC-EEEBT--TTCBEEETTTTTCCTTSCC-SSBCCTTTSSSC
T ss_pred CccCCCc-EEEcC--CCCCcCcCcCCCCCccCCC-CCEECCCCcCCC
Confidence 3334566 99999 9999999999998665444 589999997543
No 35
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.21 E-value=7e-07 Score=67.25 Aligned_cols=50 Identities=26% Similarity=0.545 Sum_probs=38.6
Q ss_pred CCCCCCCceeeccC--CCCeEEeeCCCCCc-ccccccccCCCCccCCCCCccccc-cc
Q 041295 35 VDLLEEEPCIKCNR--RDESLLVCIQSGCP-ISVHENCLSCGVKSDDVGNIYCPY-FW 88 (209)
Q Consensus 35 ~d~~neD~CikC~k--dGq~LL~Cs~~gCP-lAvH~kClg~sl~~dd~GnfYCPy-C~ 88 (209)
.+.-+...| +|+. .|+ +|.|+.-.|| -.||..|++ ++..+.|.||||. |.
T Consensus 21 ~~~~~~~yC-iC~~~~~g~-MI~CD~c~C~~eWfH~~CVg--l~~~p~~~W~Cp~cC~ 74 (90)
T 2jmi_A 21 NNNQEEVYC-FCRNVSYGP-MVACDNPACPFEWFHYGCVG--LKQAPKGKWYCSKDCK 74 (90)
T ss_dssp ---CCSCCS-TTTCCCSSS-EECCCSSSCSCSCEETTTSS--CSSCTTSCCCSSHHHH
T ss_pred CCCCCCcEE-EeCCCCCCC-EEEecCCCCccccCcCccCC--CCcCCCCCccCChhhc
Confidence 344466788 7997 677 9999955588 589999999 5556789999999 85
No 36
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.15 E-value=3.4e-07 Score=69.71 Aligned_cols=45 Identities=24% Similarity=0.375 Sum_probs=36.8
Q ss_pred CceeeccCCC----------CeEEeeCCCCCcccccccccCCCCc---cCCCCCccccccc
Q 041295 41 EPCIKCNRRD----------ESLLVCIQSGCPISVHENCLSCGVK---SDDVGNIYCPYFW 88 (209)
Q Consensus 41 D~CikC~kdG----------q~LL~Cs~~gCPlAvH~kClg~sl~---~dd~GnfYCPyC~ 88 (209)
++|..|..++ + ||.|+ +||.+||..|++.++. ..+.+.|+||.|.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~-Li~C~--~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEE-LVSCA--DCGRSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCC-CEECS--SSCCEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred CcCccCCCCccccccCCCCCC-CeEeC--CCCCccchhhCCChhhhhhccCCCccCccccC
Confidence 5788886644 5 99999 9999999999997643 3568899999994
No 37
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=97.94 E-value=1.2e-06 Score=66.33 Aligned_cols=47 Identities=23% Similarity=0.350 Sum_probs=37.7
Q ss_pred CCCceeeccCC---------CCeEEeeCCCCCcccccccccCCCCc---cCCCCCccccccc
Q 041295 39 EEEPCIKCNRR---------DESLLVCIQSGCPISVHENCLSCGVK---SDDVGNIYCPYFW 88 (209)
Q Consensus 39 neD~CikC~kd---------Gq~LL~Cs~~gCPlAvH~kClg~sl~---~dd~GnfYCPyC~ 88 (209)
..++|..|..+ |+ ||.|+ +|+.+||..|++.++. ....++|+||.|.
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~-Ll~C~--~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEE-LISCA--DCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCC-CEECT--TTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred cCccccccCCchhhCcCCCchh-ceEhh--hcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 46789999654 35 99999 9999999999985432 3468999999997
No 38
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.86 E-value=7.3e-06 Score=58.55 Aligned_cols=49 Identities=29% Similarity=0.592 Sum_probs=38.4
Q ss_pred CCCCceeeccC--CCCeEEeeCCCCCc-ccccccccCCCCccCCCCCccccccchh
Q 041295 38 LEEEPCIKCNR--RDESLLVCIQSGCP-ISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 38 ~neD~CikC~k--dGq~LL~Cs~~gCP-lAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
.+.-.|+ |+. .|. ++.|+.-.|| .-||..|++. +-.+.+.||||.|.-+
T Consensus 4 ~~~~yC~-C~~~~~g~-MI~CD~cdC~~~WfH~~Cvgl--~~~p~~~w~Cp~C~~~ 55 (70)
T 1x4i_A 4 GSSGYCI-CNQVSYGE-MVGCDNQDCPIEWFHYGCVGL--TEAPKGKWYCPQCTAA 55 (70)
T ss_dssp SCCCCST-TSCCCCSS-EECCSCTTCSCCCEEHHHHTC--SSCCSSCCCCHHHHHH
T ss_pred CCCeEEE-cCCCCCCC-EeEeCCCCCCccCCccccccc--CcCCCCCEECCCCCcc
Confidence 3556786 886 666 9999955587 6899999994 4467899999999743
No 39
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=97.81 E-value=4.8e-06 Score=63.67 Aligned_cols=50 Identities=22% Similarity=0.463 Sum_probs=41.3
Q ss_pred CCCCCCceeecc--CCCCeEEeeCCCCCcccccccccCCC------------CccCCCCCccccccc
Q 041295 36 DLLEEEPCIKCN--RRDESLLVCIQSGCPISVHENCLSCG------------VKSDDVGNIYCPYFW 88 (209)
Q Consensus 36 d~~neD~CikC~--kdGq~LL~Cs~~gCPlAvH~kClg~s------------l~~dd~GnfYCPyC~ 88 (209)
...+++.|-+|. ..+. |++|. .|.+.||..||... +.-....-|.||+|-
T Consensus 11 ~~~~D~~C~VC~~~t~~~-l~pCR--vC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Ce 74 (89)
T 1wil_A 11 PVVNDEMCDVCEVWTAES-LFPCR--VCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCD 74 (89)
T ss_dssp CCCCSCCCTTTCCCCSSC-CSSCS--SSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTC
T ss_pred CCCCCcccCccccccccc-eeccc--cccccccHhhcccccccccHHHHHHHHccCCCCCccccccc
Confidence 344899999999 5566 99999 99999999999863 444578899999994
No 40
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.74 E-value=5e-06 Score=65.74 Aligned_cols=51 Identities=16% Similarity=0.295 Sum_probs=40.3
Q ss_pred CCCCceeeccCC----CCeEEeeCCCCCcccccccccCCCCc-cCCCCCccccccchhhH
Q 041295 38 LEEEPCIKCNRR----DESLLVCIQSGCPISVHENCLSCGVK-SDDVGNIYCPYFWYKCE 92 (209)
Q Consensus 38 ~neD~CikC~kd----Gq~LL~Cs~~gCPlAvH~kClg~sl~-~dd~GnfYCPyC~ykka 92 (209)
.+...| +|+.. |. ++.|+ .|+.-||..|++.+.. .+..+.|+||.|.-+..
T Consensus 6 ~~~~~C-~C~~~~~~~~~-mi~Cd--~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~~ 61 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKF-YIGCD--RCQNWYHGRCVGILQSEAELIDEYVCPQCQSTED 61 (174)
T ss_dssp -CCEET-TTTEECCTTSC-EEECT--TTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHHH
T ss_pred CCCcEe-eCCCCCCCCCC-EeECC--CCCchhChhhcCCchhhccCccCeecCCCcchhc
Confidence 366789 99984 34 89999 9999999999997543 34578999999987653
No 41
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.71 E-value=2.5e-05 Score=56.06 Aligned_cols=57 Identities=18% Similarity=0.356 Sum_probs=42.4
Q ss_pred ccCCCCCCCceeeccCC---CCeEEeeCCCCCcccccccccCCCCcc-----CCCCCccccccchhh
Q 041295 33 MDVDLLEEEPCIKCNRR---DESLLVCIQSGCPISVHENCLSCGVKS-----DDVGNIYCPYFWYKC 91 (209)
Q Consensus 33 ~~~d~~neD~CikC~kd---Gq~LL~Cs~~gCPlAvH~kClg~sl~~-----dd~GnfYCPyC~ykk 91 (209)
.+.++-+.-.| +|+.. |. .+.|+...|+.=||..|++.+..- .....||||.|..++
T Consensus 9 d~~~~~~~~~C-iC~~~~~~g~-MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 9 DPFQPEIKVRC-VCGNSLETDS-MIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CSSSCCCCCCC-SSCCCCCCSC-EEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred cccCCCCCEEe-ECCCcCCCCC-EEEECCccCCccccCEEEccccccccccccCCCCEECCCCCccc
Confidence 34455567789 59985 44 788886689999999999965442 235799999997654
No 42
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.61 E-value=2.4e-05 Score=53.53 Aligned_cols=53 Identities=21% Similarity=0.422 Sum_probs=40.8
Q ss_pred CCCCceeeccCC---CCeEEeeCCCCCcccccccccCCCCcc-CCCCCccccccchhhH
Q 041295 38 LEEEPCIKCNRR---DESLLVCIQSGCPISVHENCLSCGVKS-DDVGNIYCPYFWYKCE 92 (209)
Q Consensus 38 ~neD~CikC~kd---Gq~LL~Cs~~gCPlAvH~kClg~sl~~-dd~GnfYCPyC~ykka 92 (209)
-+...|.+|++. +...+.|+ .|..=||..|++.+..- +....|+||.|.-+++
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~Cd--~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~~ 60 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWICCD--LCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSG 60 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECS--SSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTTC
T ss_pred CCCCCCCCCCCccCCCCCEEEcc--CCCCCCCccccCcChhHhcCCCcEECCCCcCcCC
Confidence 366789999974 22288999 99999999999975442 2358999999987654
No 43
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.58 E-value=6.7e-05 Score=52.82 Aligned_cols=51 Identities=20% Similarity=0.369 Sum_probs=38.8
Q ss_pred CCCCCceeeccCC---CCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 37 LLEEEPCIKCNRR---DESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 37 ~~neD~CikC~kd---Gq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
..+.-.|+ |+.. |...+.|+ .|-.=||..|++....-.....||||.|.-+
T Consensus 13 ~~~~~~C~-C~~~~~~g~~mI~Cd--~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 13 DNWKVDCK-CGTKDDDGERMLACD--GCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp CSSEECCT-TCCCSCCSSCEEECS--SSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred CCcceEee-CCCccCCCCcEEECC--CCCCccCCeeeccCccccCCCcEECCCccCC
Confidence 33556795 9974 43388899 8999999999997643344689999999754
No 44
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=97.47 E-value=9.2e-05 Score=51.81 Aligned_cols=52 Identities=21% Similarity=0.491 Sum_probs=36.7
Q ss_pred CCCceeeccC---CCCeEEeeCCCCCcccccccccCCCCccCC----CCCccccccchhhH
Q 041295 39 EEEPCIKCNR---RDESLLVCIQSGCPISVHENCLSCGVKSDD----VGNIYCPYFWYKCE 92 (209)
Q Consensus 39 neD~CikC~k---dGq~LL~Cs~~gCPlAvH~kClg~sl~~dd----~GnfYCPyC~ykka 92 (209)
+.-.| +|+. +|. .+.|++..|..=||..|++.+..... ...||||.|..+++
T Consensus 9 ~~v~C-~C~~~~~~g~-mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~r~ 67 (68)
T 2rsd_A 9 AKVRC-ICSSTMVNDS-MIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLSRA 67 (68)
T ss_dssp CEECC-TTCCCSCCSC-EEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHHHT
T ss_pred CCEEe-ECCCCcCCCC-EEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCccc
Confidence 34457 4976 355 88898556999999999996433222 24799999986653
No 45
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=97.44 E-value=5.1e-05 Score=57.54 Aligned_cols=56 Identities=16% Similarity=0.344 Sum_probs=41.5
Q ss_pred CCceeeccCC----CCeEEeeCCCCCcccccccccCCCCcc------CCCCCccccccchhhHHHHHH
Q 041295 40 EEPCIKCNRR----DESLLVCIQSGCPISVHENCLSCGVKS------DDVGNIYCPYFWYKCELMRTK 97 (209)
Q Consensus 40 eD~CikC~kd----Gq~LL~Cs~~gCPlAvH~kClg~sl~~------dd~GnfYCPyC~ykka~eey~ 97 (209)
...|.+|++. |. .+.|+ .+|..=||..|++.+..- ++.+.|+||.|.-+.......
T Consensus 3 ~~~C~iC~~p~~~~~~-mi~Cd-d~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~~~~~~ 68 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQD-AILCE-ASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKEGSGSG 68 (105)
T ss_dssp CCBCTTTCSBCCTTSC-EEECT-TTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTTTC---
T ss_pred cCCCCCCCCccCCCCC-EEEec-CCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCCCCCCC
Confidence 3579999986 55 88887 499999999999965321 466999999999876554333
No 46
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=97.14 E-value=0.0003 Score=49.75 Aligned_cols=52 Identities=13% Similarity=0.288 Sum_probs=39.5
Q ss_pred CCCCCCCceeeccCC--CCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 35 VDLLEEEPCIKCNRR--DESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 35 ~d~~neD~CikC~kd--Gq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
.+..+.-.| +|++. |...+.|+ .|..=||..|++.+.. .....|+||.|.-+
T Consensus 14 ~~~~~~~~C-iC~~~~~~~~MIqCd--~C~~WfH~~Cvgi~~~-~~~~~~~C~~C~~s 67 (68)
T 3o70_A 14 LYFQGLVTC-FCMKPFAGRPMIECN--ECHTWIHLSCAKIRKS-NVPEVFVCQKCRDS 67 (68)
T ss_dssp CTTTTCCCS-TTCCCCTTCCEEECT--TTCCEEETTTTTCCTT-SCCSSCCCHHHHTC
T ss_pred CCCCCceEe-ECCCcCCCCCEEECC--CCCccccccccCcCcc-cCCCcEECCCCCCC
Confidence 334467788 89984 33388999 8999999999997654 34579999999643
No 47
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.06 E-value=0.00016 Score=51.11 Aligned_cols=49 Identities=16% Similarity=0.411 Sum_probs=36.8
Q ss_pred CCCceeeccCCCC--eEEeeCCCCCcccccccccCCCCccC-----CCCCccccccchh
Q 041295 39 EEEPCIKCNRRDE--SLLVCIQSGCPISVHENCLSCGVKSD-----DVGNIYCPYFWYK 90 (209)
Q Consensus 39 neD~CikC~kdGq--~LL~Cs~~gCPlAvH~kClg~sl~~d-----d~GnfYCPyC~yk 90 (209)
+.-.| +|++... ..+.|+ .|..=||..|++.+..-. ....||||.|..+
T Consensus 15 ~~~~C-~C~~~~~~~~MI~Cd--~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~ 70 (76)
T 1wem_A 15 NALYC-ICRQPHNNRFMICCD--RCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECS--SSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCCEE-ECCCccCCCCEEEeC--CCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCc
Confidence 35678 6998532 288899 899999999999754321 3579999999754
No 48
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=96.71 E-value=0.00096 Score=44.40 Aligned_cols=46 Identities=15% Similarity=0.406 Sum_probs=34.4
Q ss_pred CCCceeeccCC--CCeEEeeCCCCCcccccccccCCCCccCCCCCccccccc
Q 041295 39 EEEPCIKCNRR--DESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFW 88 (209)
Q Consensus 39 neD~CikC~kd--Gq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ 88 (209)
+.-.|+ |+.. |...+.|+ .|..=||..|++.+.. .....|+||.|.
T Consensus 3 d~~~C~-C~~~~~~~~MI~Cd--~C~~W~H~~Cvgi~~~-~~~~~~~C~~C~ 50 (52)
T 3o7a_A 3 DLVTCF-CMKPFAGRPMIECN--ECHTWIHLSCAKIRKS-NVPEVFVCQKCR 50 (52)
T ss_dssp TCBCST-TCCBCTTCCEEECT--TTCCEEETTTTTCCGG-GCCSSCCCHHHH
T ss_pred cCeEEE-eCCcCCCCCEEEcC--CCCccccccccCCCcc-cCCCcEECcCCC
Confidence 344553 7763 32388999 8999999999997654 335799999995
No 49
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.28 E-value=0.0015 Score=46.60 Aligned_cols=50 Identities=18% Similarity=0.293 Sum_probs=37.0
Q ss_pred CCCceeeccCCC---CeEEeeCCCCCcccccccccCCCCcc-CCCCCccccccchhh
Q 041295 39 EEEPCIKCNRRD---ESLLVCIQSGCPISVHENCLSCGVKS-DDVGNIYCPYFWYKC 91 (209)
Q Consensus 39 neD~CikC~kdG---q~LL~Cs~~gCPlAvH~kClg~sl~~-dd~GnfYCPyC~ykk 91 (209)
+.-.| +|+... ...+.|+ .|..=||..|++....- +....|+||.|.-+.
T Consensus 11 ~~~~C-~C~~~~d~~~~MIqCd--~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 11 VPVYC-LCRQPYNVNHFMIECG--LCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCS-TTSCSCCSSSCEEEBT--TTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CccEE-EcCCccCCCCceEEcC--CCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 44566 788842 2288999 89999999999975432 235799999998543
No 50
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=96.27 E-value=0.00062 Score=47.94 Aligned_cols=49 Identities=18% Similarity=0.395 Sum_probs=37.3
Q ss_pred CCCceeeccCC---CCeEEeeCCCCCcccccccccCCCCcc------CCCCCccccccc
Q 041295 39 EEEPCIKCNRR---DESLLVCIQSGCPISVHENCLSCGVKS------DDVGNIYCPYFW 88 (209)
Q Consensus 39 neD~CikC~kd---Gq~LL~Cs~~gCPlAvH~kClg~sl~~------dd~GnfYCPyC~ 88 (209)
...+|.+|++. +...+.|++ +|..=||..|++.+..- ++.+.|+||.|.
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~-~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEA-SCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTT-TTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCcCccCCCccCCCCCeEeccc-CccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 56789999984 333778884 99999999999975431 477899999995
No 51
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=95.96 E-value=0.0016 Score=43.41 Aligned_cols=46 Identities=17% Similarity=0.389 Sum_probs=33.2
Q ss_pred ceeeccCC---CCeEEeeCCCCCcccccccccCCCCccCCCCCccccccc
Q 041295 42 PCIKCNRR---DESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFW 88 (209)
Q Consensus 42 ~CikC~kd---Gq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ 88 (209)
.|-+|++. +...+.|++ .|..=||..|++.+..-.+.+.|+||.|.
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~-~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDG-GCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTT-TTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCC-CCCccCcccccCCCccccCCCCEECCCCC
Confidence 35567663 332778886 79999999999975443334899999984
No 52
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=95.43 E-value=0.0069 Score=50.11 Aligned_cols=52 Identities=17% Similarity=0.319 Sum_probs=37.5
Q ss_pred CceeeccCC---CC---eEEeeCCCCCcccccccccCCCCc-------cCCCCCccccccchhhHHH
Q 041295 41 EPCIKCNRR---DE---SLLVCIQSGCPISVHENCLSCGVK-------SDDVGNIYCPYFWYKCELM 94 (209)
Q Consensus 41 D~CikC~kd---Gq---~LL~Cs~~gCPlAvH~kClg~sl~-------~dd~GnfYCPyC~ykka~e 94 (209)
+.|.+|++. ++ ..+.|+ .|..=||.+|++.+.. ..+...|+||.|.-+....
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd--~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~~ 67 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCG--KCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPAE 67 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECT--TTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSCH
T ss_pred CcCCCCcCccCCcccCCCeEECC--CCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCHH
Confidence 568888872 22 288999 9999999999996431 1123489999999775543
No 53
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=94.48 E-value=0.0083 Score=42.41 Aligned_cols=44 Identities=18% Similarity=0.366 Sum_probs=33.0
Q ss_pred eeccCC----CCeEEeeCCCCCcccccccccCCCCcc-CCCCCccccccchh
Q 041295 44 IKCNRR----DESLLVCIQSGCPISVHENCLSCGVKS-DDVGNIYCPYFWYK 90 (209)
Q Consensus 44 ikC~kd----Gq~LL~Cs~~gCPlAvH~kClg~sl~~-dd~GnfYCPyC~yk 90 (209)
-+|+.. +. .+.|+ .|..=||..|++.+..- .....|+||.|.-+
T Consensus 13 CiC~~~~~~~~~-MI~Cd--~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~ 61 (75)
T 3kqi_A 13 CVCRLPYDVTRF-MIECD--ACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKT 61 (75)
T ss_dssp TTTTEECCTTSC-EEECT--TTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHH
T ss_pred EECCCcCCCCCC-EEEcC--CCCCCEecccccccccccCCCCEEECCCCccc
Confidence 368873 34 88999 89999999999965432 22368999999754
No 54
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=94.40 E-value=0.02 Score=54.55 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=29.0
Q ss_pred EEeeCCCCCcccccccccCCCCcc-CCCCCccccccchh
Q 041295 53 LLVCIQSGCPISVHENCLSCGVKS-DDVGNIYCPYFWYK 90 (209)
Q Consensus 53 LL~Cs~~gCPlAvH~kClg~sl~~-dd~GnfYCPyC~yk 90 (209)
.+.|+ .|.-=||..|++.+..- +..+.||||.|.-.
T Consensus 58 mI~CD--~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~ 94 (528)
T 3pur_A 58 WIGCD--SCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPH 94 (528)
T ss_dssp EEECT--TTCCEEEGGGTTCCGGGTTTEEECCCTTTHHH
T ss_pred EEECC--CCCcCCCCcCCCCChhHhcCCCeEECcCCcCC
Confidence 56788 99999999999976543 34589999999854
No 55
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=94.34 E-value=0.012 Score=43.66 Aligned_cols=35 Identities=26% Similarity=0.466 Sum_probs=27.5
Q ss_pred EEeeCCCCCcccccccccCCCCc----cCCCCCccccccch
Q 041295 53 LLVCIQSGCPISVHENCLSCGVK----SDDVGNIYCPYFWY 89 (209)
Q Consensus 53 LL~Cs~~gCPlAvH~kClg~sl~----~dd~GnfYCPyC~y 89 (209)
||.|+ .|...||..|++.... -+....|+||.|.-
T Consensus 75 m~~C~--~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~ 113 (117)
T 4bbq_A 75 LMECC--ICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQ 113 (117)
T ss_dssp CEEET--TTCCEECGGGCCSCCCCEECSSSSSEEECTTTC-
T ss_pred eEEee--ecCCeEECCCCCCCccccccccCCCCeECCCCcC
Confidence 88999 9999999999996533 23345699999973
No 56
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.69 E-value=0.016 Score=41.53 Aligned_cols=53 Identities=21% Similarity=0.390 Sum_probs=36.0
Q ss_pred CCCCceeeccCCC---Ce-EEeeCCCCCcccccccccCCCCccCCCCCccccccchhhH
Q 041295 38 LEEEPCIKCNRRD---ES-LLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKCE 92 (209)
Q Consensus 38 ~neD~CikC~kdG---q~-LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykka 92 (209)
.+++.|.+|-.+. +. +++|.=.|.--.||..|+..=+. -.++..||+|.+...
T Consensus 13 ~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~--~~~~~~CplCr~~~~ 69 (80)
T 2d8s_A 13 SSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIK--SSDTRCCELCKYEFI 69 (80)
T ss_dssp TTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHH--HHCCSBCSSSCCBCC
T ss_pred CCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHh--hCCCCCCCCCCCeee
Confidence 4678999998643 22 45565334458999999974332 245689999987654
No 57
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=93.50 E-value=0.0043 Score=42.49 Aligned_cols=51 Identities=24% Similarity=0.288 Sum_probs=36.5
Q ss_pred CCCceeeccCCCCe--EEeeCCCCCcccccccccCCCCccCCCCCccccccchhh
Q 041295 39 EEEPCIKCNRRDES--LLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 39 neD~CikC~kdGq~--LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykk 91 (209)
+.+.|.+|-.++.. +++|.=.|.-..||..|+.. =+..+++..||.|-+..
T Consensus 5 ~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~--W~~~~~~~~C~~C~~~~ 57 (60)
T 1vyx_A 5 DVPVCWICNEELGNERFRACGCTGELENVHRSCLST--WLTISRNTACQICGVVY 57 (60)
T ss_dssp SCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHH--HHHHHTCSBCTTTCCBC
T ss_pred CCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHH--HHHhCCCCccCCCCCee
Confidence 67889999764333 67765335566999999984 33345789999998764
No 58
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=93.48 E-value=0.043 Score=42.12 Aligned_cols=42 Identities=17% Similarity=0.337 Sum_probs=36.4
Q ss_pred CCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccc
Q 041295 39 EEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYC 84 (209)
Q Consensus 39 neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYC 84 (209)
..-.|..|++... +.|. .||.|||..|+...+...+...|+|
T Consensus 57 p~c~C~~C~k~~~--~~C~--~Cp~sfC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 57 PWHQCDECSSAAV--SFCE--FCPHSFCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp GGGBCTTTCSBCC--EECS--SSSCEECTTTCTTSCEECTTTTCEE
T ss_pred CCCCCCcCCCCCC--cCcC--CCCcchhhhccCCcceecCCCCcee
Confidence 3456889998877 6899 9999999999999998888888987
No 59
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=92.06 E-value=0.031 Score=52.06 Aligned_cols=48 Identities=19% Similarity=0.345 Sum_probs=35.9
Q ss_pred CCCceeeccCC----CCeEEeeCCCCCcccccccccCCCCcc-CCCCCccccccchh
Q 041295 39 EEEPCIKCNRR----DESLLVCIQSGCPISVHENCLSCGVKS-DDVGNIYCPYFWYK 90 (209)
Q Consensus 39 neD~CikC~kd----Gq~LL~Cs~~gCPlAvH~kClg~sl~~-dd~GnfYCPyC~yk 90 (209)
+.-.| +|+.. |. .+.|+ .|.-=||..|++.+..- +..+.||||.|.-+
T Consensus 36 ~~~yC-~C~~~~d~~~~-MIqCd--~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 88 (488)
T 3kv5_D 36 PPVYC-VCRQPYDVNRF-MIECD--ICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVL 88 (488)
T ss_dssp CCEET-TTTEECCTTSC-EEEBT--TTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHH
T ss_pred CCeEE-eCCCcCCCCCC-eEEcc--CCCCceeeeecCcCcccccCCCEEECCCCcCC
Confidence 34456 89873 34 88899 89999999999965443 22478999999854
No 60
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=91.95 E-value=0.035 Score=45.80 Aligned_cols=53 Identities=19% Similarity=0.258 Sum_probs=42.5
Q ss_pred CCCCCceeeccCCCCeEEeeCCCCCcccccccccCC--CC----ccCCCCCccccccchh
Q 041295 37 LLEEEPCIKCNRRDESLLVCIQSGCPISVHENCLSC--GV----KSDDVGNIYCPYFWYK 90 (209)
Q Consensus 37 ~~neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~--sl----~~dd~GnfYCPyC~yk 90 (209)
..-+..|..|+.+|+ ||.|+...||.+|=.+|+.. ++ .......|.|=.|.-+
T Consensus 76 DG~~~yC~wC~~Gg~-l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~ 134 (159)
T 3a1b_A 76 DGYQSYCTICCGGRE-VLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHK 134 (159)
T ss_dssp TSSBSSCTTTSCCSE-EEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSS
T ss_pred CCCcceeeEecCCCe-EEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCc
Confidence 345789999999998 99999889999999999863 11 2245789999888643
No 61
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=89.73 E-value=0.063 Score=49.38 Aligned_cols=53 Identities=21% Similarity=0.326 Sum_probs=43.3
Q ss_pred CCCCCceeeccCCCCeEEeeCCCCCcccccccccCCCC------ccCCCCCccccccchh
Q 041295 37 LLEEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGV------KSDDVGNIYCPYFWYK 90 (209)
Q Consensus 37 ~~neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl------~~dd~GnfYCPyC~yk 90 (209)
..-+..|..|+.+|+ |++|+...|+.+|=.+|+..-+ .......|.|=.|.-+
T Consensus 90 DG~~~yCr~C~~Gg~-l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~ 148 (386)
T 2pv0_B 90 DGYQSYCSICCSGET-LLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPS 148 (386)
T ss_dssp SSSBCSCTTTCCCSS-CEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSC
T ss_pred CCCcccceEcCCCCe-EEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCc
Confidence 345789999999999 9999999999999999987422 2244689999999755
No 62
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=87.94 E-value=0.066 Score=49.63 Aligned_cols=45 Identities=18% Similarity=0.316 Sum_probs=34.0
Q ss_pred eeccC----CCCeEEeeCCCCCcccccccccCCCCccC-CCCCccccccchhh
Q 041295 44 IKCNR----RDESLLVCIQSGCPISVHENCLSCGVKSD-DVGNIYCPYFWYKC 91 (209)
Q Consensus 44 ikC~k----dGq~LL~Cs~~gCPlAvH~kClg~sl~~d-d~GnfYCPyC~ykk 91 (209)
-+|+. +|. .+.|+ .|.-=||..|++.+..-. +.+.|+||.|.-+.
T Consensus 8 CiC~~~~d~~~~-MIqCD--~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~ 57 (447)
T 3kv4_A 8 CLCRLPYDVTRF-MIECD--MCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLH 57 (447)
T ss_dssp TTTTEECCTTSC-EEECT--TTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHH
T ss_pred EeCCCcCCCCCC-eEEcC--CCCcccccccCCcCcccccCCCEEECCCCcccc
Confidence 36776 245 88888 999999999999654432 33789999998653
No 63
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=83.51 E-value=0.38 Score=35.26 Aligned_cols=31 Identities=19% Similarity=0.639 Sum_probs=26.7
Q ss_pred CCceeeccCC--CCeEEeeCCCCCcccccccccC
Q 041295 40 EEPCIKCNRR--DESLLVCIQSGCPISVHENCLS 71 (209)
Q Consensus 40 eD~CikC~kd--Gq~LL~Cs~~gCPlAvH~kClg 71 (209)
.-.|.+|+.. |- -+.|+...|..+||..|.-
T Consensus 17 ~l~C~iC~~~~~GA-ciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 17 KLTCYLCKQKGVGA-SIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCCBTTTTBCCSSC-EEECSCTTTCCEEEHHHHH
T ss_pred cCCCcCCCCCCCcE-eEecCCCCCCCcCcHHHHH
Confidence 4579999864 77 8999989999999999975
No 64
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=79.47 E-value=3 Score=29.07 Aligned_cols=52 Identities=23% Similarity=0.542 Sum_probs=33.9
Q ss_pred cCCCCCCCceeeccCC---CCeEEeeCCCCCcccccccccCCC---------CccCCCCCccccccchh
Q 041295 34 DVDLLEEEPCIKCNRR---DESLLVCIQSGCPISVHENCLSCG---------VKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 34 ~~d~~neD~CikC~kd---Gq~LL~Cs~~gCPlAvH~kClg~s---------l~~dd~GnfYCPyC~yk 90 (209)
+........|..|++. ++ +|.-. -..+|..|+.+. .-+...|..||..|..+
T Consensus 9 ~~~~~~~~~C~~C~~~I~~~~-~v~a~----~~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~~ 72 (91)
T 2d8y_A 9 KFQAPARETCVECQKTVYPME-RLLAN----QQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQ 72 (91)
T ss_dssp CSCSSSSCBCTTTCCBCCTTS-EEECS----SSEEETTTCBCTTTCCBCCTTTCCCSSSCCCCHHHHHH
T ss_pred ccCCCCCCcCccCCCccCCce-eEEEC----CCEECCCCCeeCCCCCCCCCCCcEeECCEEECHHHHHH
Confidence 3444567899999983 35 55433 368899888752 12344578888888754
No 65
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=78.43 E-value=0.44 Score=40.26 Aligned_cols=44 Identities=20% Similarity=0.418 Sum_probs=34.8
Q ss_pred CCceeeccC---CCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 40 EEPCIKCNR---RDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 40 eD~CikC~k---dGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
...|..|.. .|+ .|. .|...||..|+. .-+...++--||.|--.
T Consensus 180 i~~C~iC~~iv~~g~---~C~--~C~~~~H~~C~~--~~~~~~~~~~CP~C~~~ 226 (238)
T 3nw0_A 180 VKICNICHSLLIQGQ---SCE--TCGIRMHLPCVA--KYFQSNAEPRCPHCNDY 226 (238)
T ss_dssp CCBCTTTCSBCSSCE---ECS--SSCCEECHHHHH--HHTTTCSSCBCTTTCCB
T ss_pred CCcCcchhhHHhCCc---ccC--ccChHHHHHHHH--HHHHhCCCCCCCCCCCC
Confidence 678999987 566 899 699999999997 33344667889999654
No 66
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.45 E-value=0.6 Score=33.38 Aligned_cols=48 Identities=19% Similarity=0.238 Sum_probs=33.4
Q ss_pred CCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 39 EEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 39 neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
..+.|.+|..--..=+.|. .|..+||..|+..= +.-.++--||.|...
T Consensus 14 ~i~~C~IC~~~i~~g~~C~--~C~h~fH~~Ci~kW--l~~~~~~~CP~Cr~~ 61 (74)
T 2ct0_A 14 AVKICNICHSLLIQGQSCE--TCGIRMHLPCVAKY--FQSNAEPRCPHCNDY 61 (74)
T ss_dssp SSCBCSSSCCBCSSSEECS--SSCCEECHHHHHHH--STTCSSCCCTTTCSC
T ss_pred CCCcCcchhhHcccCCccC--CCCchhhHHHHHHH--HHhcCCCCCCCCcCc
Confidence 4678999987322122788 99999999999832 222344679999744
No 67
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=77.39 E-value=0.57 Score=33.75 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=27.3
Q ss_pred EEeeCCCCCcccccccccCCCC-------ccCCCCCccccccch
Q 041295 53 LLVCIQSGCPISVHENCLSCGV-------KSDDVGNIYCPYFWY 89 (209)
Q Consensus 53 LL~Cs~~gCPlAvH~kClg~sl-------~~dd~GnfYCPyC~y 89 (209)
.+.|+ .|--=+|.+|++.+. ...++-+|.||.|.-
T Consensus 2 mi~c~--~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~ 43 (140)
T 2ku7_A 2 MMQCG--KCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTE 43 (140)
T ss_dssp CCCCS--CCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTT
T ss_pred ccccc--cCCCccCCcccccCHHHHHHHhhccccceeeCccccc
Confidence 46799 999999999998652 223466899999964
No 68
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=77.10 E-value=1.6 Score=29.15 Aligned_cols=48 Identities=19% Similarity=0.343 Sum_probs=30.2
Q ss_pred CCCCCCceeeccC---CCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 36 DLLEEEPCIKCNR---RDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 36 d~~neD~CikC~k---dGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
...+...|.+|-. .+..+. -- .|--.||..|+..-+. ....||+|...
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~-~~--~C~H~fc~~Ci~~~~~----~~~~CP~Cr~~ 61 (78)
T 2ect_A 11 HVGSGLECPVCKEDYALGESVR-QL--PCNHLFHDSCIVPWLE----QHDSCPVCRKS 61 (78)
T ss_dssp TSSSSCCCTTTTSCCCTTSCEE-EC--TTSCEEETTTTHHHHT----TTCSCTTTCCC
T ss_pred cCCCCCCCeeCCccccCCCCEE-Ee--CCCCeecHHHHHHHHH----cCCcCcCcCCc
Confidence 3446789999955 333221 11 3557899999974322 23589999754
No 69
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=77.03 E-value=5.4 Score=29.91 Aligned_cols=51 Identities=25% Similarity=0.484 Sum_probs=32.4
Q ss_pred CCCCCCceeeccCC--CCeEEeeCCCCCcccccccccCC---CC--------ccCCCCCccccccchh
Q 041295 36 DLLEEEPCIKCNRR--DESLLVCIQSGCPISVHENCLSC---GV--------KSDDVGNIYCPYFWYK 90 (209)
Q Consensus 36 d~~neD~CikC~kd--Gq~LL~Cs~~gCPlAvH~kClg~---sl--------~~dd~GnfYCPyC~yk 90 (209)
..+-...|..|++. +..+|.-. -..+|..|+-+ .. -+...|..||..|..+
T Consensus 57 ~~~~~~~C~~C~~~I~~~~~v~a~----~~~wH~~CF~C~~C~~~L~~~g~~f~~~dg~~yC~~cy~~ 120 (123)
T 2l4z_A 57 GGLSWKRCAGCGGKIADRFLLYAM----DSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIR 120 (123)
T ss_dssp SCSSCSBBSSSSSBCCSSSEEEET----TEEEETTTSBCTTTCCBGGGTTCCCBCSSSCCBCHHHHHH
T ss_pred cCccCCcCcCCCCCcCCcEEEEeC----CcEEcccccCcCcCCCcccccCCceEEECCEEeCHHHhhh
Confidence 34457899999982 33244333 36788888774 11 2345678899888765
No 70
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=76.34 E-value=2.4 Score=28.78 Aligned_cols=49 Identities=18% Similarity=0.227 Sum_probs=33.9
Q ss_pred CCCCceeeccC--CCCeEEeeCCCCCcccccccccCCC---------CccCCCCCccccccchhh
Q 041295 38 LEEEPCIKCNR--RDESLLVCIQSGCPISVHENCLSCG---------VKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 38 ~neD~CikC~k--dGq~LL~Cs~~gCPlAvH~kClg~s---------l~~dd~GnfYCPyC~ykk 91 (209)
.....|..|++ .++ .|.-. -..+|..|+.+. .-+...|..||..|..+.
T Consensus 13 ~~~~~C~~C~~~I~~~-~~~a~----~~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~cy~~~ 72 (79)
T 1x62_A 13 QKLPMCDKCGTGIVGV-FVKLR----DRHRHPECYVCTDCGTNLKQKGHFFVEDQIYCEKHARER 72 (79)
T ss_dssp CCCCCCSSSCCCCCSS-CEECS----SCEECTTTTSCSSSCCCHHHHCCEESSSCEECHHHHHHH
T ss_pred CCCCccccCCCCccCc-EEEEC----cceeCcCcCeeCCCCCCCCCCCeEeECCEEECHHHHHHH
Confidence 45789999998 355 44443 268899998752 224556889999988654
No 71
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.44 E-value=1.6 Score=29.75 Aligned_cols=51 Identities=24% Similarity=0.369 Sum_probs=28.6
Q ss_pred CCCCCCcccCCCCCCCceeeccCCCCe--EEeeCCCCCcccccc-cccCCCCccCCCCCccccccchh
Q 041295 26 SGRSRDFMDVDLLEEEPCIKCNRRDES--LLVCIQSGCPISVHE-NCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 26 S~~S~Ds~~~d~~neD~CikC~kdGq~--LL~Cs~~gCPlAvH~-kClg~sl~~dd~GnfYCPyC~yk 90 (209)
|+.|.+.++ ...++..|.+|-..-.. ||+|. |. -|..+... .+.||+|.-.
T Consensus 2 ~~~s~e~e~-~~~~~~~C~IC~~~~~~~v~~pCg--------H~~~C~~C~~~-----~~~CP~CR~~ 55 (68)
T 2ea5_A 2 SSGSSGVEP-SEENSKDCVVCQNGTVNWVLLPCR--------HTCLCDGCVKY-----FQQCPMCRQF 55 (68)
T ss_dssp CSSCCCCCC-SCCCSSCCSSSSSSCCCCEETTTT--------BCCSCTTHHHH-----CSSCTTTCCC
T ss_pred CCccccccc-cCCCCCCCCCcCcCCCCEEEECCC--------ChhhhHHHHhc-----CCCCCCCCcc
Confidence 344444322 23357889999764433 56777 44 33333222 3789999754
No 72
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=72.08 E-value=2.7 Score=34.97 Aligned_cols=43 Identities=12% Similarity=0.013 Sum_probs=29.9
Q ss_pred ccCCCCe---EEeeCCCCCcccccccccCCCCccCCCC----Cccccccchh
Q 041295 46 CNRRDES---LLVCIQSGCPISVHENCLSCGVKSDDVG----NIYCPYFWYK 90 (209)
Q Consensus 46 C~kdGq~---LL~Cs~~gCPlAvH~kClg~sl~~dd~G----nfYCPyC~yk 90 (209)
||++|+- -|.|+ .|-.-||..|+.......-.+ .|.|..|.-.
T Consensus 10 CG~~~~~~~~mLqC~--~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~ 59 (177)
T 3rsn_A 10 EENGRQLGEVELQCG--ICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHS 59 (177)
T ss_dssp -CTTCCTTSCEEECT--TTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTT
T ss_pred cCCCCCCCceeEeec--cccceecHHHhcccccCccccceeEEEEccccCCC
Confidence 7877763 57899 899999999998643222222 3559999764
No 73
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=71.24 E-value=3.9 Score=28.19 Aligned_cols=53 Identities=19% Similarity=0.436 Sum_probs=34.2
Q ss_pred cCCCCCCCceeeccC---CCCeEEeeCCCCCcccccccccCC---CC-----ccCCCCCccccccchhh
Q 041295 34 DVDLLEEEPCIKCNR---RDESLLVCIQSGCPISVHENCLSC---GV-----KSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 34 ~~d~~neD~CikC~k---dGq~LL~Cs~~gCPlAvH~kClg~---sl-----~~dd~GnfYCPyC~ykk 91 (209)
+..+.....|..|++ +++ +|.-. -..+|..|+-+ .. -+...|..||..|..+.
T Consensus 9 ~~~~~~~~~C~~C~~~I~~~~-~v~a~----~~~wH~~CF~C~~C~~~L~~~~~~~~g~~yC~~~y~~~ 72 (80)
T 2dj7_A 9 PIKIRGPSHCAGCKEEIKHGQ-SLLAL----DKQWHVSCFKCQTCSVILTGEYISKDGVPYCESDYHAQ 72 (80)
T ss_dssp CCCCSSCSCCTTTCCCCSSSC-CEEET----TEEECTTTCBCSSSCCBCSSCCEEETTEEECTTHHHHH
T ss_pred CcCCCCCCCCcCcCCeeCCCe-EEEEC----CcccccccCCcCcCCCCcCCCeEEECCEEECHHHHHHH
Confidence 344556789999998 466 54433 25788877764 11 13345788999887654
No 74
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=71.17 E-value=0.91 Score=29.73 Aligned_cols=48 Identities=23% Similarity=0.365 Sum_probs=30.2
Q ss_pred CCCCCCceeeccC---CCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 36 DLLEEEPCIKCNR---RDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 36 d~~neD~CikC~k---dGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
+...+..|.+|-. .+. -+..- .|--.||..|+..-+.. +..||+|...
T Consensus 10 ~~~~~~~C~IC~~~~~~~~-~~~~~--~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~ 60 (69)
T 2kiz_A 10 EEDTEEKCTICLSILEEGE-DVRRL--PCMHLFHQVCVDQWLIT----NKKCPICRVD 60 (69)
T ss_dssp STTCCCSBTTTTBCCCSSS-CEEEC--TTSCEEEHHHHHHHHHH----CSBCTTTCSB
T ss_pred cCCCCCCCeeCCccccCCC-cEEEe--CCCCHHHHHHHHHHHHc----CCCCcCcCcc
Confidence 3446788999954 333 22333 46688999999743322 2359999754
No 75
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=70.41 E-value=1.7 Score=27.04 Aligned_cols=46 Identities=17% Similarity=0.376 Sum_probs=30.2
Q ss_pred CCCceeeccCC---CCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 39 EEEPCIKCNRR---DESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 39 neD~CikC~kd---Gq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
++..|.+|-.. ++.+..-. .|--.||..|+..-+. .+..||.|...
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~--~C~H~f~~~Ci~~w~~----~~~~CP~Cr~~ 52 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLP--RCGHGFHAECVDMWLG----SHSTCPLCRLT 52 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECS--SSCCEECTTHHHHTTT----TCCSCSSSCCC
T ss_pred CCCcCccCCccccCCCceEECC--CCCCcccHHHHHHHHH----cCCcCcCCCCE
Confidence 46679999764 33233333 4778899999974332 25679999754
No 76
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.61 E-value=1.7 Score=27.14 Aligned_cols=45 Identities=18% Similarity=0.358 Sum_probs=28.9
Q ss_pred CCCCCceeeccCCCCe--EEeeCCCCCcccccccccCCCCccCCCCCcccccc
Q 041295 37 LLEEEPCIKCNRRDES--LLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYF 87 (209)
Q Consensus 37 ~~neD~CikC~kdGq~--LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC 87 (209)
..++..|.+|...=.. +|. |--.||..|+..-... -.+...||.|
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~-----CgH~fC~~Ci~~~~~~-~~~~~~CP~C 58 (58)
T 2ecj_A 12 LQVEASCSVCLEYLKEPVIIE-----CGHNFCKACITRWWED-LERDFPCPVC 58 (58)
T ss_dssp SCCCCBCSSSCCBCSSCCCCS-----SCCCCCHHHHHHHTTS-SCCSCCCSCC
T ss_pred cccCCCCccCCcccCccEeCC-----CCCccCHHHHHHHHHh-cCCCCCCCCC
Confidence 3467789999864332 444 5567888998743221 1467889988
No 77
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.57 E-value=2.1 Score=28.36 Aligned_cols=48 Identities=15% Similarity=0.135 Sum_probs=32.2
Q ss_pred CCCCCCceeeccCCCCe--EEeeCCCCCcccccccccCCCCccCCCCCccccccchhhH
Q 041295 36 DLLEEEPCIKCNRRDES--LLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKCE 92 (209)
Q Consensus 36 d~~neD~CikC~kdGq~--LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykka 92 (209)
...+...|.+|...=.. ++ .|--.||..|+..-+. ....||+|.....
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~-----~CgH~fC~~Ci~~~~~----~~~~CP~Cr~~~~ 60 (71)
T 2d8t_A 11 PSLTVPECAICLQTCVHPVSL-----PCKHVFCYLCVKGASW----LGKRCALCRQEIP 60 (71)
T ss_dssp SSSSCCBCSSSSSBCSSEEEE-----TTTEEEEHHHHHHCTT----CSSBCSSSCCBCC
T ss_pred cCCCCCCCccCCcccCCCEEc-----cCCCHHHHHHHHHHHH----CCCcCcCcCchhC
Confidence 34567889999875443 33 3567899999874332 2378999986644
No 78
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=68.38 E-value=7.9 Score=26.58 Aligned_cols=51 Identities=20% Similarity=0.320 Sum_probs=34.2
Q ss_pred CCCCCCCceeeccC---CCCeEEeeCCCCCcccccccccCCC--------Ccc---CCCCCccccccchh
Q 041295 35 VDLLEEEPCIKCNR---RDESLLVCIQSGCPISVHENCLSCG--------VKS---DDVGNIYCPYFWYK 90 (209)
Q Consensus 35 ~d~~neD~CikC~k---dGq~LL~Cs~~gCPlAvH~kClg~s--------l~~---dd~GnfYCPyC~yk 90 (209)
........|..|++ +++ +|.-. -..+|..|+.+. ..| ...|.+||..|..+
T Consensus 10 ~~~~~~~~C~~C~~~I~~~e-~v~a~----~~~wH~~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~ 74 (82)
T 2co8_A 10 QEAGAGDLCALCGEHLYVLE-RLCVN----GHFFHRSCFRCHTCEATLWPGGYEQHPGDGHFYCLQHLPQ 74 (82)
T ss_dssp CCCCSSCBCSSSCCBCCTTT-BCCBT----TBCCBTTTCBCSSSCCBCCTTSEECCTTTCCCEETTTCCC
T ss_pred cCCCCCCCCcccCCCcccce-EEEEC----CCeeCCCcCEEcCCCCCcCCCceeEeCcCCEEEChHHHHh
Confidence 33456789999998 456 55433 358999998752 111 34688999888754
No 79
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=67.66 E-value=1.3 Score=27.60 Aligned_cols=47 Identities=17% Similarity=0.283 Sum_probs=30.3
Q ss_pred CCCCceeeccCCC---CeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 38 LEEEPCIKCNRRD---ESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 38 ~neD~CikC~kdG---q~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
.++..|.+|-..= ......- .|--.||..|+..-+.. ...||+|...
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~--~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~ 52 (55)
T 2ecm_A 3 SGSSGCPICLEDIHTSRVVAHVL--PCGHLLHRTCYEEMLKE----GYRCPLCSGP 52 (55)
T ss_dssp SCCCSCTTTCCCCCTTTSCEEEC--TTSCEEETTHHHHHHHH----TCCCTTSCCS
T ss_pred CCCCcCcccChhhcCCCcCeEec--CCCCcccHHHHHHHHHc----CCcCCCCCCc
Confidence 3567899997642 1133334 56678999999743322 1779999743
No 80
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=67.22 E-value=1.5 Score=29.10 Aligned_cols=51 Identities=22% Similarity=0.318 Sum_probs=32.9
Q ss_pred CCCCCCceeeccCCCCe--EEeeCCCCCcccccccccCCCCcc--CCCCCccccccchhh
Q 041295 36 DLLEEEPCIKCNRRDES--LLVCIQSGCPISVHENCLSCGVKS--DDVGNIYCPYFWYKC 91 (209)
Q Consensus 36 d~~neD~CikC~kdGq~--LL~Cs~~gCPlAvH~kClg~sl~~--dd~GnfYCPyC~ykk 91 (209)
...++..|.+|...=.. ++. |--.||..|+..-... .+.+.+.||+|....
T Consensus 15 ~~~~~~~C~IC~~~~~~p~~~~-----CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecw_A 15 MIKEEVTCPICLELLKEPVSAD-----CNHSFCRACITLNYESNRNTDGKGNCPVCRVPY 69 (85)
T ss_dssp CCCTTTSCTTTCSCCSSCEECT-----TSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCC
T ss_pred hCccCCCCcCCChhhCcceeCC-----CCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcC
Confidence 34467889999875332 333 5567888888632211 235689999997553
No 81
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=64.10 E-value=2.7 Score=30.58 Aligned_cols=33 Identities=30% Similarity=0.728 Sum_probs=23.8
Q ss_pred CCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchhhH
Q 041295 39 EEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKCE 92 (209)
Q Consensus 39 neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykka 92 (209)
+..-|++|+.+.. |.|- +| .|+.||+-||....
T Consensus 7 e~pWC~ICneDAt--lrC~--gC-----------------dgDLYC~rC~rE~H 39 (67)
T 2d8v_A 7 GLPWCCICNEDAT--LRCA--GC-----------------DGDLYCARCFREGH 39 (67)
T ss_dssp CCSSCTTTCSCCC--EEET--TT-----------------TSEEECSSHHHHHT
T ss_pred CCCeeEEeCCCCe--EEec--CC-----------------CCceehHHHHHHHc
Confidence 4556899998866 5776 44 35799999995543
No 82
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=63.86 E-value=2.2 Score=28.67 Aligned_cols=50 Identities=16% Similarity=0.360 Sum_probs=32.6
Q ss_pred CCCCCCCceeeccCCCCe--EEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 35 VDLLEEEPCIKCNRRDES--LLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 35 ~d~~neD~CikC~kdGq~--LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
.+..++..|.+|...=.. +|. .|--.||..|+..-+ ...+...||.|...
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~----~CgH~fC~~Ci~~~~--~~~~~~~CP~Cr~~ 61 (74)
T 2yur_A 10 DPIPDELLCLICKDIMTDAVVIP----CCGNSYCDECIRTAL--LESDEHTCPTCHQN 61 (74)
T ss_dssp CCSCGGGSCSSSCCCCTTCEECS----SSCCEECTTHHHHHH--HHSSSSCCSSSCCS
T ss_pred ccCCCCCCCcCCChHHhCCeEcC----CCCCHHHHHHHHHHH--HhcCCCcCCCCCCc
Confidence 344567889999774332 222 266789999987433 22456789999753
No 83
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.35 E-value=1.5 Score=29.23 Aligned_cols=46 Identities=26% Similarity=0.520 Sum_probs=30.7
Q ss_pred CCCCceeeccC---CCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 38 LEEEPCIKCNR---RDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 38 ~neD~CikC~k---dGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
.++..|.+|-. .++ .+..- .|--.||..|+..-+.. +..||.|...
T Consensus 21 ~~~~~C~IC~~~~~~~~-~~~~l--~C~H~fh~~Ci~~w~~~----~~~CP~Cr~~ 69 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQ-LLRVL--PCNHEFHAKCVDKWLKA----NRTCPICRAD 69 (75)
T ss_dssp SSCCEETTTTEECCBTC-EEEEE--TTTEEEETTHHHHHHHH----CSSCTTTCCC
T ss_pred CCCCCCeECCcccCCCC-eEEEE--CCCCHhHHHHHHHHHHc----CCcCcCcCCc
Confidence 36788999984 454 33333 46688999999743322 3579999743
No 84
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=63.26 E-value=1.4 Score=31.51 Aligned_cols=31 Identities=23% Similarity=0.370 Sum_probs=21.0
Q ss_pred CCcccccccccCCCCccCC-CCCccccccchh
Q 041295 60 GCPISVHENCLSCGVKSDD-VGNIYCPYFWYK 90 (209)
Q Consensus 60 gCPlAvH~kClg~sl~~dd-~GnfYCPyC~yk 90 (209)
.|-=.||..|+..-+.... .....||.|...
T Consensus 60 ~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~ 91 (114)
T 1v87_A 60 KCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTI 91 (114)
T ss_dssp SSCCEECHHHHHHHHHHTCCSSCCBCTTTCCB
T ss_pred CCCCcccHHHHHHHHHcccCCCCCcCCCCCCc
Confidence 4667999999984332211 457799999743
No 85
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.41 E-value=2.3 Score=27.31 Aligned_cols=48 Identities=23% Similarity=0.368 Sum_probs=31.1
Q ss_pred CCCCCCceeeccCC-------CCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 36 DLLEEEPCIKCNRR-------DESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 36 d~~neD~CikC~kd-------Gq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
...+...|.+|-.. ++ +++-. .|--.||..|+..-+.. ...||+|...
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~-~~~~~--~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~ 65 (69)
T 2ea6_A 11 RPSGTVSCPICMDGYSEIVQNGR-LIVST--ECGHVFCSQCLRDSLKN----ANTCPTCRKK 65 (69)
T ss_dssp CTTCCCCCTTTCCCHHHHTTTTC-CEEEC--SSSCEEEHHHHHHHHHH----CSSCTTTCCC
T ss_pred CCCCCCCCcccCccccccccccC-CeEeC--CCCChhcHHHHHHHHHc----CCCCCCCCCc
Confidence 34467889999873 23 22333 56678999999743221 4579999743
No 86
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=60.36 E-value=7.2 Score=26.96 Aligned_cols=50 Identities=18% Similarity=0.297 Sum_probs=32.4
Q ss_pred CCCCCceeeccC--CCCeEEeeCCCCCcccccccccCC---CC------ccCCCCCccccccchhh
Q 041295 37 LLEEEPCIKCNR--RDESLLVCIQSGCPISVHENCLSC---GV------KSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 37 ~~neD~CikC~k--dGq~LL~Cs~~gCPlAvH~kClg~---sl------~~dd~GnfYCPyC~ykk 91 (209)
......|..|++ .++ .+.-. -..+|..|+.+ .. -+...|..||..|..+.
T Consensus 22 ~~~~~~C~~C~~~I~~~-~~~a~----~~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~~~ 82 (89)
T 1x64_A 22 AQRMPLCDKCGSGIVGA-VVKAR----DKYRHPECFVCADCNLNLKQKGYFFVEGELYCETHARAR 82 (89)
T ss_dssp CCSCCBCTTTCCBCCSC-CEESS----SCEECTTTCCCSSSCCCTTTSCCEEETTEEECHHHHHHH
T ss_pred CCcCCCcccCCCEeccc-EEEEC----CceECccCCEecCCCCCCCCCCeEeECCEEECHHHHHHH
Confidence 345678999997 445 44433 26889988875 11 22335778998887654
No 87
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=60.01 E-value=2.8 Score=28.43 Aligned_cols=51 Identities=24% Similarity=0.380 Sum_probs=32.7
Q ss_pred CCCceeeccC---CCCeEEeeCCCCCcccccccccCCC---------CccCCCCCccccccchhhHHH
Q 041295 39 EEEPCIKCNR---RDESLLVCIQSGCPISVHENCLSCG---------VKSDDVGNIYCPYFWYKCELM 94 (209)
Q Consensus 39 neD~CikC~k---dGq~LL~Cs~~gCPlAvH~kClg~s---------l~~dd~GnfYCPyC~ykka~e 94 (209)
..+.|..|++ +++ ++.-. -..+|..|+.+. .-+...|..||..|..+.-..
T Consensus 6 ~~~~C~~C~~~I~~~~-~~~a~----~~~~H~~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~~f~~ 68 (81)
T 1a7i_A 6 GGNKCGACGRTVYHAE-EVQCD----GRSFHRCCFLCMVCRKNLDSTTVAIHDAEVYCKSCYGKKYGP 68 (81)
T ss_dssp --CBCSSSCCBCSSTT-EEEET----TEEEESSSEECSSSCCEECSSCCEEETTEEECSHHHHHHCC-
T ss_pred CCCcCcCcCccccCce-eEEeC----CcccccccCccCCCCCCCCCCCeEeeCCEEECHHHHHHHhCC
Confidence 4578999998 566 65554 367888887642 123446788999998665433
No 88
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.58 E-value=2.9 Score=27.65 Aligned_cols=51 Identities=27% Similarity=0.429 Sum_probs=31.7
Q ss_pred CCCCCCceeeccCCCCe--EEeeCCCCCcccccccccCCCCcc--CCCCCccccccchhh
Q 041295 36 DLLEEEPCIKCNRRDES--LLVCIQSGCPISVHENCLSCGVKS--DDVGNIYCPYFWYKC 91 (209)
Q Consensus 36 d~~neD~CikC~kdGq~--LL~Cs~~gCPlAvH~kClg~sl~~--dd~GnfYCPyC~ykk 91 (209)
...+...|.+|...=.. ++ .|--.||..|+..-... .+.+...||+|....
T Consensus 15 ~~~~~~~C~IC~~~~~~p~~~-----~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecv_A 15 NVKEEVTCPICLELLTQPLSL-----DCGHSFCQACLTANHKKSMLDKGESSCPVCRISY 69 (85)
T ss_dssp CCCCCCCCTTTCSCCSSCBCC-----SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSS
T ss_pred HccCCCCCCCCCcccCCceeC-----CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCcc
Confidence 34467889999875432 33 35567888888632211 134578899997543
No 89
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.09 E-value=6.1 Score=25.73 Aligned_cols=51 Identities=20% Similarity=0.280 Sum_probs=33.1
Q ss_pred CCCCCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 36 DLLEEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 36 d~~neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
...++..|.+|...=..-+.- .|--.||..|+..-+. ...+...||+|...
T Consensus 16 ~~~~~~~C~IC~~~~~~~~~~---~CgH~fC~~Ci~~~~~-~~~~~~~CP~Cr~~ 66 (73)
T 2ysl_A 16 KLQEEVICPICLDILQKPVTI---DCGHNFCLKCITQIGE-TSCGFFKCPLCKTS 66 (73)
T ss_dssp CCCCCCBCTTTCSBCSSEEEC---TTCCEEEHHHHHHHCS-SSCSCCCCSSSCCC
T ss_pred hCccCCEeccCCcccCCeEEc---CCCChhhHHHHHHHHH-cCCCCCCCCCCCCc
Confidence 344678899998754431111 4667789999874322 12567899999754
No 90
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=54.24 E-value=9.4 Score=24.88 Aligned_cols=49 Identities=18% Similarity=0.400 Sum_probs=30.3
Q ss_pred CCCCceeeccC--CCCeEEeeCCCCCcccccccccCCC---C------ccCCCCCccccccchhh
Q 041295 38 LEEEPCIKCNR--RDESLLVCIQSGCPISVHENCLSCG---V------KSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 38 ~neD~CikC~k--dGq~LL~Cs~~gCPlAvH~kClg~s---l------~~dd~GnfYCPyC~ykk 91 (209)
+....|..|++ .++ .+.-. ...+|..|+.+. . -+...|..||+.|..+.
T Consensus 3 ~~~~~C~~C~~~I~~~-~~~a~----~~~~H~~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~~ 62 (69)
T 2cur_A 3 SGSSGCVKCNKAITSG-GITYQ----DQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNF 62 (69)
T ss_dssp CCCCCCSSSCCCCCTT-CEEET----TEEECTTTTBCTTTCCBCTTSCEEECSSCEEEHHHHHHH
T ss_pred CCcCCCcccCCEeCcc-eEEEC----ccccccCcCEECCCCCCCCCCccEeECCEEECHHHhHHH
Confidence 45678999987 344 33333 257888887641 1 12445788998887543
No 91
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.74 E-value=2.5 Score=27.17 Aligned_cols=46 Identities=22% Similarity=0.382 Sum_probs=29.9
Q ss_pred CCCCCCceeeccCCCCe--EEeeCCCCCcccccccccCCCCccCCCCCcccccc
Q 041295 36 DLLEEEPCIKCNRRDES--LLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYF 87 (209)
Q Consensus 36 d~~neD~CikC~kdGq~--LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC 87 (209)
...++..|.+|...=.. +| .|--.||..|+..-+.. ..+...||.|
T Consensus 16 ~~~~~~~C~IC~~~~~~p~~~-----~CgH~fC~~Ci~~~~~~-~~~~~~CP~C 63 (63)
T 2ysj_A 16 KLQEEVICPICLDILQKPVTI-----DCGHNFCLKCITQIGET-SCGFFKCPLC 63 (63)
T ss_dssp CCCCCCBCTTTCSBCSSCEEC-----TTSSEECHHHHHHHHHH-CSSCCCCSCC
T ss_pred hCccCCCCCcCCchhCCeEEe-----CCCCcchHHHHHHHHHc-CCCCCcCcCC
Confidence 34467889999874332 33 35577888998743321 2367789988
No 92
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=53.05 E-value=5.5 Score=26.26 Aligned_cols=49 Identities=24% Similarity=0.364 Sum_probs=31.9
Q ss_pred CCCCceeeccCCCCe--EEeeCCCCCcccccccccCCCCcc---CCCCCccccccchhh
Q 041295 38 LEEEPCIKCNRRDES--LLVCIQSGCPISVHENCLSCGVKS---DDVGNIYCPYFWYKC 91 (209)
Q Consensus 38 ~neD~CikC~kdGq~--LL~Cs~~gCPlAvH~kClg~sl~~---dd~GnfYCPyC~ykk 91 (209)
.++..|.+|...=.. +| .|--.||..|+..-... ...+...||.|....
T Consensus 10 ~~~~~C~IC~~~~~~p~~l-----~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~ 63 (79)
T 2egp_A 10 QEEVTCPICLELLTEPLSL-----DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISY 63 (79)
T ss_dssp CCCCEETTTTEECSSCCCC-----SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCC
T ss_pred ccCCCCcCCCcccCCeeEC-----CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcC
Confidence 467789999763322 33 35577888898853332 124588999998554
No 93
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=51.85 E-value=10 Score=24.84 Aligned_cols=48 Identities=17% Similarity=0.333 Sum_probs=30.3
Q ss_pred CCCCceeeccCC----CCeEEeeCCCCCcccccccccCCC---C------ccCCCCCccccccchh
Q 041295 38 LEEEPCIKCNRR----DESLLVCIQSGCPISVHENCLSCG---V------KSDDVGNIYCPYFWYK 90 (209)
Q Consensus 38 ~neD~CikC~kd----Gq~LL~Cs~~gCPlAvH~kClg~s---l------~~dd~GnfYCPyC~yk 90 (209)
+....|..|++. +. ++.-. ...+|..|+.+. . -+...|..||..|..+
T Consensus 3 ~~~~~C~~C~~~I~~~~~-~~~a~----~~~~H~~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~ 63 (72)
T 1x61_A 3 SGSSGCGGCGEDVVGDGA-GVVAL----DRVFHVGCFVCSTCRAQLRGQHFYAVERRAYCEGCYVA 63 (72)
T ss_dssp SCCCCCSSSCSCCCSSSC-CEECS----SSEECTTTCBCSSSCCBCTTSCEEESSSCEEEHHHHHH
T ss_pred CCCCCCccCCCccCCCce-EEEEC----CCeEcccCCcccccCCcCCcCcCEeeCCeEECHHHHHH
Confidence 456789999973 23 44444 257888887651 1 2234578899988754
No 94
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.33 E-value=3.8 Score=27.01 Aligned_cols=48 Identities=25% Similarity=0.504 Sum_probs=30.8
Q ss_pred CCCCCCceeeccCC---CCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 36 DLLEEEPCIKCNRR---DESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 36 d~~neD~CikC~kd---Gq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
+...++.|.+|-.. +..+... .|--.||..|+..-+.. +..||+|...
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~---~C~H~f~~~Ci~~~~~~----~~~CP~Cr~~ 61 (74)
T 2ep4_A 11 ELNLHELCAVCLEDFKPRDELGIC---PCKHAFHRKCLIKWLEV----RKVCPLCNMP 61 (74)
T ss_dssp CCCCSCBCSSSCCBCCSSSCEEEE---TTTEEEEHHHHHHHHHH----CSBCTTTCCB
T ss_pred cCCCCCCCcCCCcccCCCCcEEEc---CCCCEecHHHHHHHHHc----CCcCCCcCcc
Confidence 34467889999875 3323222 36688999999743322 2379999754
No 95
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=51.15 E-value=3.7 Score=31.45 Aligned_cols=51 Identities=22% Similarity=0.407 Sum_probs=1.2
Q ss_pred CCCceeeccCCCCe-EEeeC-------CC-------CCcccccccccCCCCccCCCCCccccccchhhHH
Q 041295 39 EEEPCIKCNRRDES-LLVCI-------QS-------GCPISVHENCLSCGVKSDDVGNIYCPYFWYKCEL 93 (209)
Q Consensus 39 neD~CikC~kdGq~-LL~Cs-------~~-------gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykka~ 93 (209)
+++.|.+|-..=.. -..|- +. .|--.||..|+..-+.. +..||.|......
T Consensus 47 ~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~----~~~CP~Cr~~~~~ 112 (117)
T 4a0k_B 47 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT----RQVCPLDNREWEF 112 (117)
T ss_dssp CC--------------------------------------------------------------------
T ss_pred CCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHc----CCcCCCCCCeeee
Confidence 56889999865321 11111 11 35567999999864433 5689999865433
No 96
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=49.87 E-value=4 Score=27.20 Aligned_cols=48 Identities=15% Similarity=0.081 Sum_probs=32.5
Q ss_pred CCCCCceeeccCCCCe-EEeeCCCCCcccccccccCCCCccCCCCCccccccchhh
Q 041295 37 LLEEEPCIKCNRRDES-LLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 37 ~~neD~CikC~kdGq~-LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykk 91 (209)
..++..|.+|...=.. ++. .|--.|+..|+..- ...+...||.|....
T Consensus 5 ~~~~~~C~IC~~~~~~Pv~~----~CgH~fc~~Ci~~~---~~~~~~~CP~C~~~~ 53 (78)
T 1t1h_A 5 FPEYFRCPISLELMKDPVIV----STGQTYERSSIQKW---LDAGHKTCPKSQETL 53 (78)
T ss_dssp CSSSSSCTTTSCCCSSEEEE----TTTEEEEHHHHHHH---HTTTCCBCTTTCCBC
T ss_pred CcccCCCCCccccccCCEEc----CCCCeecHHHHHHH---HHHCcCCCCCCcCCC
Confidence 4467889999874332 221 46688999998732 235688999998653
No 97
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=49.57 E-value=15 Score=25.41 Aligned_cols=49 Identities=27% Similarity=0.556 Sum_probs=32.6
Q ss_pred CCCCceeeccC--CCCeEEeeCCCCCcccccccccCCC---------CccCCCCCccccccchhh
Q 041295 38 LEEEPCIKCNR--RDESLLVCIQSGCPISVHENCLSCG---------VKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 38 ~neD~CikC~k--dGq~LL~Cs~~gCPlAvH~kClg~s---------l~~dd~GnfYCPyC~ykk 91 (209)
.....|..|++ .|+ .|.-. -..+|..|+.+. .-+...|..||..|..+.
T Consensus 23 ~~~~~C~~C~~~I~~~-~v~a~----~~~~H~~CF~C~~C~~~L~~~~f~~~~g~~yC~~cy~~~ 82 (90)
T 2dar_A 23 KRTPMCAHCNQVIRGP-FLVAL----GKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF 82 (90)
T ss_dssp TCCCBBSSSCCBCCSC-EEEET----TEEECTTTCBCSSSCCBCSSSCBEESSSCEECHHHHHHH
T ss_pred CCCCCCccCCCEecce-EEEEC----CccccccCCccCCCCCCCCCCEeEeECCEEECHHHHHHH
Confidence 35678999988 455 44444 268898888751 122356788999887654
No 98
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.12 E-value=4.5 Score=26.37 Aligned_cols=45 Identities=24% Similarity=0.505 Sum_probs=31.4
Q ss_pred CCCCCceeeccCCCCe-EEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 37 LLEEEPCIKCNRRDES-LLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 37 ~~neD~CikC~kdGq~-LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
..+...|.+|-..-.. ++. |--.||..|+..-+. ....||.|...
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~-----CgH~fc~~Ci~~~~~----~~~~CP~Cr~~ 57 (70)
T 2ecn_A 12 LTDEEECCICMDGRADLILP-----CAHSFCQKCIDKWSD----RHRNCPICRLQ 57 (70)
T ss_dssp CCCCCCCSSSCCSCCSEEET-----TTEEECHHHHHHSSC----CCSSCHHHHHC
T ss_pred CCCCCCCeeCCcCccCcccC-----CCCcccHHHHHHHHH----CcCcCCCcCCc
Confidence 3467889999875442 444 557799999974322 57889999744
No 99
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=48.65 E-value=4.6 Score=28.23 Aligned_cols=46 Identities=20% Similarity=0.363 Sum_probs=30.2
Q ss_pred CCCCceeeccC---CCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 38 LEEEPCIKCNR---RDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 38 ~neD~CikC~k---dGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
.++..|.+|-. .|+ .+.-- .|--.||..|+..-+. .+..||+|...
T Consensus 38 ~~~~~C~IC~~~~~~~~-~~~~l--~C~H~Fh~~Ci~~wl~----~~~~CP~Cr~~ 86 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGD-VATEL--PCHHYFHKPCVSIWLQ----KSGTCPVCRCM 86 (91)
T ss_dssp SSCSEETTTTEECCTTC-EEEEE--TTTEEEEHHHHHHHHT----TTCBCTTTCCB
T ss_pred CCCCCCcccChhhcCCC-cEEec--CCCChHHHHHHHHHHH----cCCcCcCcCcc
Confidence 35778999964 344 22222 3668999999974322 24589999754
No 100
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=48.36 E-value=11 Score=24.95 Aligned_cols=49 Identities=20% Similarity=0.448 Sum_probs=32.0
Q ss_pred CCCCceeeccCC----CCeEEeeCCCCCcccccccccCCC---------CccCCCCCccccccchhh
Q 041295 38 LEEEPCIKCNRR----DESLLVCIQSGCPISVHENCLSCG---------VKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 38 ~neD~CikC~kd----Gq~LL~Cs~~gCPlAvH~kClg~s---------l~~dd~GnfYCPyC~ykk 91 (209)
+....|..|++. +. ++.-. -..+|..|+.+. .-+...|..||..|..+.
T Consensus 9 ~~~~~C~~C~~~I~~~~~-~~~a~----~~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~~~ 70 (77)
T 1g47_A 9 LASATCERCKGGFAPAEK-IVNSN----GELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQML 70 (77)
T ss_dssp CCCCBCSSSCCBCCSTTT-CEEET----TEEECTTTCCCTTTCCCCGGGCSEEETTEEECHHHHHHH
T ss_pred CCCCCchhcCCccCCCce-EEEeC----ccEeccccCeECCCCCCCCCCCeEeECCeEeCHHHHHHH
Confidence 456889999983 33 55444 247899888752 123456778888887543
No 101
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.94 E-value=3.9 Score=28.17 Aligned_cols=46 Identities=30% Similarity=0.482 Sum_probs=28.9
Q ss_pred CCCceeeccCCCC--------------eEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 39 EEEPCIKCNRRDE--------------SLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 39 neD~CikC~kdGq--------------~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
+++.|.+|-..-+ .++.-. .|--.||..|+..-+.. +--||+|...
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~--~C~H~FH~~Ci~~Wl~~----~~~CP~CR~~ 73 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWG--ECNHSFHNCCMSLWVKQ----NNRCPLCQQD 73 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEE--TTSCEEEHHHHHHHTTT----CCBCTTTCCB
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeC--CCCCccChHHHHHHHHh----CCCCCCcCCC
Confidence 5677888876432 122222 46689999999843332 2389999754
No 102
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=47.28 E-value=3 Score=28.69 Aligned_cols=52 Identities=19% Similarity=0.365 Sum_probs=33.3
Q ss_pred cCCCCCCCceeeccCC--CCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchhh
Q 041295 34 DVDLLEEEPCIKCNRR--DESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 34 ~~d~~neD~CikC~kd--Gq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykk 91 (209)
.....++..|.+|... ..-++. .|--.|+..|+.. .+...+.+.||.|....
T Consensus 7 ~~~~~~~~~C~IC~~~~~~p~~~~----~CgH~fC~~Ci~~--~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 7 DDPIPDELLCLICKDIMTDAVVIP----CCGNSYCDECIRT--ALLESDEHTCPTCHQND 60 (92)
T ss_dssp CCCCCTTTEETTTTEECSSCEECT----TTCCEECHHHHHH--HHHHCTTCCCTTTCCSS
T ss_pred cccCCcCCCCCCCChhhcCceECC----CCCCHHHHHHHHH--HHHhcCCCcCcCCCCcC
Confidence 3444577889999863 221332 2567788888863 23345678999998663
No 103
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=46.33 E-value=12 Score=23.84 Aligned_cols=40 Identities=23% Similarity=0.576 Sum_probs=26.1
Q ss_pred CCCceeeccCCCCe--EEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 39 EEEPCIKCNRRDES--LLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 39 neD~CikC~kdGq~--LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
++-.|.+|...=.. +|.|. -.|+..|+.. ....||.|...
T Consensus 5 ~~~~C~IC~~~~~~p~~l~Cg-----H~fC~~Ci~~-------~~~~CP~Cr~~ 46 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLLPCL-----HTLCSGCLEA-------SGMQCPICQAP 46 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTS-----CCSBTTTCSS-------SSSSCSSCCSS
T ss_pred cCCCceEeCCccCCeEEcCCC-----CcccHHHHcc-------CCCCCCcCCcE
Confidence 45668888763332 45554 5677777764 46789999754
No 104
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.08 E-value=2.9 Score=27.22 Aligned_cols=47 Identities=17% Similarity=0.248 Sum_probs=31.3
Q ss_pred CCCCCCceeeccCCCCe--EEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 36 DLLEEEPCIKCNRRDES--LLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 36 d~~neD~CikC~kdGq~--LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
...++..|.+|...-.. ++ .|--.||..|+..-.. .++..||.|...
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~-----~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~ 59 (66)
T 2ecy_A 11 TVEDKYKCEKCHLVLCSPKQT-----ECGHRFCESCMAALLS---SSSPKCTACQES 59 (66)
T ss_dssp SCCCCEECTTTCCEESSCCCC-----SSSCCCCHHHHHHHHT---TSSCCCTTTCCC
T ss_pred cCCcCCCCCCCChHhcCeeEC-----CCCCHHHHHHHHHHHH---hCcCCCCCCCcC
Confidence 34467789999763221 33 4567788899874332 567789999754
No 105
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=45.22 E-value=6.5 Score=24.11 Aligned_cols=12 Identities=8% Similarity=0.030 Sum_probs=10.2
Q ss_pred CCCccccccchh
Q 041295 79 VGNIYCPYFWYK 90 (209)
Q Consensus 79 ~GnfYCPyC~yk 90 (209)
.|+|.||.|-+.
T Consensus 4 ~gDW~C~~C~~~ 15 (33)
T 2k1p_A 4 ANDWQCKTCSNV 15 (33)
T ss_dssp SSSCBCSSSCCB
T ss_pred CCCcccCCCCCc
Confidence 699999999754
No 106
>2yqp_A Probable ATP-dependent RNA helicase DDX59; structure genomics, ZF-HIT domain, DEAD box polypeptide 59 isoform 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.17 E-value=25 Score=25.09 Aligned_cols=27 Identities=26% Similarity=0.463 Sum_probs=19.9
Q ss_pred CCCcccCCCCCCCceeeccCCCCeEEeeCC
Q 041295 29 SRDFMDVDLLEEEPCIKCNRRDESLLVCIQ 58 (209)
Q Consensus 29 S~Ds~~~d~~neD~CikC~kdGq~LL~Cs~ 58 (209)
+.++ ++...-+.+|++|+.=|+ .+|+.
T Consensus 9 sk~Q-r~p~pgePvCvvCGryGe--YICd~ 35 (60)
T 2yqp_A 9 SKTQ-RWAEPGEPICVVCGRYGE--YICDK 35 (60)
T ss_dssp CCCC-CCCCTTSCCCSSSSSCCS--EECSS
T ss_pred hhhh-cCCCCCCceEEEecCccc--eeecC
Confidence 3444 455567888999999999 58883
No 107
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=44.14 E-value=5.1 Score=31.05 Aligned_cols=44 Identities=23% Similarity=0.385 Sum_probs=32.9
Q ss_pred CCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 39 EEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 39 neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
.-.-|--|+-..++|+.|+ -|-=|+.+ ++..=+---+||.||+.
T Consensus 27 G~~nCKsCWf~~k~LV~C~-------dHYLCl~C-LtlmL~~SdrCpIC~~p 70 (99)
T 2ko5_A 27 GPQFCKSCWFENKGLVECN-------NHYLCLNC-LTLLLSVSNRCPICKMP 70 (99)
T ss_dssp CCCCCCSSCSCCSSEEECS-------SCEEEHHH-HHHTCSSSSEETTTTEE
T ss_pred CcccChhhccccCCeeeec-------chhhHHHH-HHHHHhhccCCcccCCc
Confidence 4567999999888899999 58888776 33333444579999975
No 108
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=43.04 E-value=14 Score=24.14 Aligned_cols=49 Identities=16% Similarity=0.416 Sum_probs=30.1
Q ss_pred CCCCceeeccC--CCCeEEeeCCCCCcccccccccCCCC---c------cCCCCCccccccchhh
Q 041295 38 LEEEPCIKCNR--RDESLLVCIQSGCPISVHENCLSCGV---K------SDDVGNIYCPYFWYKC 91 (209)
Q Consensus 38 ~neD~CikC~k--dGq~LL~Cs~~gCPlAvH~kClg~sl---~------~dd~GnfYCPyC~ykk 91 (209)
.....|..|++ .|+ .|.-. -..+|..|+.+.. . +...|..||..|..+.
T Consensus 3 ~~~~~C~~C~~~I~~~-~~~a~----~~~~H~~CF~C~~C~~~L~~~~f~~~~g~~yC~~c~~~~ 62 (70)
T 2d8x_A 3 SGSSGCHQCGEFIIGR-VIKAM----NNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNRE 62 (70)
T ss_dssp CCSSBCSSSCCBCCSC-CEEET----TEEECTTTSBCSSSCCBCSSSCCEEETTEEECHHHHHHH
T ss_pred CCCCcCccCCCEecce-EEEEC----cccccccCCEeCCCCCcCCCCccEeECCeEECHHHhhhh
Confidence 34567888887 344 44333 2578888887521 1 2236778888887544
No 109
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=42.96 E-value=5.7 Score=24.23 Aligned_cols=12 Identities=8% Similarity=0.202 Sum_probs=10.1
Q ss_pred CCCccccccchh
Q 041295 79 VGNIYCPYFWYK 90 (209)
Q Consensus 79 ~GnfYCPyC~yk 90 (209)
.|+|.||.|-+.
T Consensus 3 ~gDW~C~~C~~~ 14 (32)
T 2lk0_A 3 FEDWLCNKCCLN 14 (32)
T ss_dssp CSEEECTTTCCE
T ss_pred CCCCCcCcCcCC
Confidence 599999999764
No 110
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=42.82 E-value=20 Score=23.81 Aligned_cols=47 Identities=21% Similarity=0.504 Sum_probs=31.0
Q ss_pred CCCceeeccC---CCCeEEeeCCCCCcccccccccCCC---C------ccCCCCCcccc-ccchh
Q 041295 39 EEEPCIKCNR---RDESLLVCIQSGCPISVHENCLSCG---V------KSDDVGNIYCP-YFWYK 90 (209)
Q Consensus 39 neD~CikC~k---dGq~LL~Cs~~gCPlAvH~kClg~s---l------~~dd~GnfYCP-yC~yk 90 (209)
....|..|++ +++ +|.-. ...+|..|+.+. . -+...|..||. .|..+
T Consensus 8 ~~~~C~~C~~~I~~~~-~v~a~----~~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~cy~~ 67 (76)
T 2cu8_A 8 MASKCPKCDKTVYFAE-KVSSL----GKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYAT 67 (76)
T ss_dssp CCCBCTTTCCBCCTTT-EEEET----TEEEETTTCBCSSSCCBCCTTSCEEETTEEECTTTHHHH
T ss_pred CCCCCcCCCCEeECCe-EEEEC----CeEeeCCCCCCCCCCCccCCCceEeECCEEecchHHHHH
Confidence 4578999998 366 55544 368898887751 1 22345788998 68754
No 111
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.28 E-value=11 Score=25.48 Aligned_cols=20 Identities=20% Similarity=0.262 Sum_probs=15.5
Q ss_pred CCccCCCCCccccccchhhH
Q 041295 73 GVKSDDVGNIYCPYFWYKCE 92 (209)
Q Consensus 73 sl~~dd~GnfYCPyC~ykka 92 (209)
+....+.+.|-||.|-|...
T Consensus 3 s~~~~~~~~W~C~~CT~~N~ 22 (53)
T 2d9g_A 3 SGSSGDEGYWDCSVCTFRNS 22 (53)
T ss_dssp CCCSSCCCCEECSSSCCEEC
T ss_pred CCCCCCCCCcCCCCCccCCC
Confidence 44567788999999988653
No 112
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=41.92 E-value=22 Score=23.02 Aligned_cols=47 Identities=15% Similarity=0.400 Sum_probs=28.5
Q ss_pred CCCceeeccC--CCCeEEeeCCCCCcccccccccCCC---------CccCCCCCccccccchh
Q 041295 39 EEEPCIKCNR--RDESLLVCIQSGCPISVHENCLSCG---------VKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 39 neD~CikC~k--dGq~LL~Cs~~gCPlAvH~kClg~s---------l~~dd~GnfYCPyC~yk 90 (209)
-...|..|++ .++ .+.-. -..+|..|+.+. .-+...|..||..|..+
T Consensus 4 ~~~~C~~C~~~I~~~-~~~a~----~~~~H~~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~ 61 (70)
T 2d8z_A 4 GSSGCVQCKKPITTG-GVTYR----EQPWHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCD 61 (70)
T ss_dssp CCCBCSSSCCBCCSS-EEESS----SSEEETTTSBCSSSCCBCTTSCCEESSSSEECHHHHHH
T ss_pred CCCCCcccCCeeccc-eEEEC----ccccCCCCCccCCCCCcCCcCceEeeCCeEECHHHHHH
Confidence 4567888887 444 33322 357888887642 11234578889888754
No 113
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=41.80 E-value=4.4 Score=31.00 Aligned_cols=48 Identities=21% Similarity=0.362 Sum_probs=33.0
Q ss_pred CCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchhh
Q 041295 39 EEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 39 neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykk 91 (209)
+...|.+|...=..-+.+. .|--.||..|+..-+. .+...||.|....
T Consensus 53 ~~~~C~IC~~~~~~p~~~~--~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 53 SELMCPICLDMLKNTMTTK--ECLHRFCADCIITALR---SGNKECPTCRKKL 100 (165)
T ss_dssp HHHBCTTTSSBCSSEEEET--TTCCEEEHHHHHHHHH---TTCCBCTTTCCBC
T ss_pred CCCCCcccChHhhCcCEeC--CCCChhHHHHHHHHHH---hCcCCCCCCCCcC
Confidence 4668999987544333333 5668899999874322 4578899998654
No 114
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=41.63 E-value=18 Score=23.65 Aligned_cols=49 Identities=16% Similarity=0.390 Sum_probs=29.3
Q ss_pred CCCCceeeccCC--C---CeEEeeCCCCCcccccccccCCC---C------ccCCCCCccccccchh
Q 041295 38 LEEEPCIKCNRR--D---ESLLVCIQSGCPISVHENCLSCG---V------KSDDVGNIYCPYFWYK 90 (209)
Q Consensus 38 ~neD~CikC~kd--G---q~LL~Cs~~gCPlAvH~kClg~s---l------~~dd~GnfYCPyC~yk 90 (209)
.....|..|++. + ..+|.-. -..+|..|+.+. . -+...|..||..|..+
T Consensus 3 ~~~~~C~~C~~~I~~~~~~~~~~a~----~~~wH~~CF~C~~C~~~L~~~~f~~~~g~~yC~~c~~~ 65 (72)
T 1x4l_A 3 SGSSGCAGCTNPISGLGGTKYISFE----ERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKD 65 (72)
T ss_dssp SCSCSBTTTTBCCCCSSSCSCEECS----SCEECTTTCBCSSSCCBCTTSCCEECSSSEECHHHHHT
T ss_pred CCCCCCcCCCccccCCCCcceEEEC----CcccCcccCEeccCCCcCCCCccEeECCEEEChhHcCc
Confidence 345688888872 2 1244333 257888887752 1 1225678888888754
No 115
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=41.56 E-value=4.1 Score=29.27 Aligned_cols=50 Identities=18% Similarity=0.371 Sum_probs=33.9
Q ss_pred CCCCCCceeeccCCCCe--EEeeCCCCCcccccccccCCCCccCCCCCccccccchhhHH
Q 041295 36 DLLEEEPCIKCNRRDES--LLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKCEL 93 (209)
Q Consensus 36 d~~neD~CikC~kdGq~--LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykka~ 93 (209)
.+.++..|.+|...=.. .| .|--.||..|+..- ...+.+.||.|......
T Consensus 11 ~~~~~~~C~iC~~~~~~p~~~-----~CgH~fC~~Ci~~~---~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 11 PSLSECQCGICMEILVEPVTL-----PCNHTLCKPCFQST---VEKASLCCPFCRRRVSS 62 (115)
T ss_dssp CCHHHHBCTTTCSBCSSCEEC-----TTSCEECHHHHCCC---CCTTTSBCTTTCCBCHH
T ss_pred CCCCCCCCccCCcccCceeEc-----CCCCHHhHHHHHHH---HhHCcCCCCCCCcccCc
Confidence 33467789999864332 33 45577888888743 34567999999876554
No 116
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=39.86 E-value=8.6 Score=27.92 Aligned_cols=33 Identities=21% Similarity=0.448 Sum_probs=27.4
Q ss_pred CCceeeccCCCCe-EEeeCCCCCcccccccccCCCC
Q 041295 40 EEPCIKCNRRDES-LLVCIQSGCPISVHENCLSCGV 74 (209)
Q Consensus 40 eD~CikC~kdGq~-LL~Cs~~gCPlAvH~kClg~sl 74 (209)
...|..|++.+.. .-.|+ .|-+.+|..|+-.+.
T Consensus 47 ~~~C~~C~~~~~~~~Y~C~--~C~f~lH~~Ca~~p~ 80 (89)
T 1v5n_A 47 VYTCDKCEEEGTIWSYHCD--ECDFDLHAKCALNED 80 (89)
T ss_dssp SCCCTTTSCCCCSCEEECT--TTCCCCCHHHHHCSS
T ss_pred CeEeCCCCCcCCCcEEEcC--CCCCeEcHHhcCCCC
Confidence 4689999997766 77898 899999999997543
No 117
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=39.83 E-value=5.5 Score=29.59 Aligned_cols=27 Identities=26% Similarity=0.390 Sum_probs=19.8
Q ss_pred CCcccccccccCCCCccCCCCCccccccchh
Q 041295 60 GCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 60 gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
.|--.||..|+..-+. .+..||.|...
T Consensus 72 ~C~H~FH~~Ci~~Wl~----~~~~CP~Cr~~ 98 (106)
T 3dpl_R 72 VCNHAFHFHCISRWLK----TRQVCPLDNRE 98 (106)
T ss_dssp TTSCEEEHHHHHHHHT----TCSBCSSSCSB
T ss_pred ccCcEECHHHHHHHHH----cCCcCcCCCCc
Confidence 4667899999985332 26789999755
No 118
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.55 E-value=7.7 Score=25.60 Aligned_cols=49 Identities=14% Similarity=0.171 Sum_probs=30.6
Q ss_pred CCCCCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 36 DLLEEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 36 d~~neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
+..+...|.+|...=..-+.-. .|--.||..|+..-+.. ...||.|...
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~--~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~ 59 (72)
T 2djb_A 11 ELTPYILCSICKGYLIDATTIT--ECLHTFCKSCIVRHFYY----SNRCPKCNIV 59 (72)
T ss_dssp CCCGGGSCTTTSSCCSSCEECS--SSCCEECHHHHHHHHHH----CSSCTTTCCC
T ss_pred hcCCCCCCCCCChHHHCcCEEC--CCCCHHHHHHHHHHHHc----CCcCCCcCcc
Confidence 3446788999977443211112 45578889998743322 5689999754
No 119
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=38.27 E-value=19 Score=22.52 Aligned_cols=31 Identities=26% Similarity=0.537 Sum_probs=23.5
Q ss_pred CCceeeccC--CC---CeEEeeCCCCCcccccccccCCC
Q 041295 40 EEPCIKCNR--RD---ESLLVCIQSGCPISVHENCLSCG 73 (209)
Q Consensus 40 eD~CikC~k--dG---q~LL~Cs~~gCPlAvH~kClg~s 73 (209)
-..|-.|++ -| | =+.|. .|-+.+|++|....
T Consensus 11 pt~C~~C~~~l~g~~~q-g~~C~--~C~~~~H~~C~~~v 46 (50)
T 1ptq_A 11 PTFCDHCGSLLWGLVKQ-GLKCE--DCGMNVHHKCREKV 46 (50)
T ss_dssp CCBCTTTCCBCCSSSSC-EEEET--TTCCEECHHHHTTS
T ss_pred CCCcCCCCceeeccCCc-cCEeC--CCCCeECHHHhhhc
Confidence 345777765 22 5 67899 99999999998853
No 120
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=37.88 E-value=5 Score=25.89 Aligned_cols=46 Identities=17% Similarity=0.339 Sum_probs=29.0
Q ss_pred CCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 39 EEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 39 neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
.+..|.+|...-..-..-- .|--.||..|+..-+. ....||+|...
T Consensus 4 ~~~~C~IC~~~~~~~~~~~--~C~H~fc~~Ci~~~~~----~~~~CP~Cr~~ 49 (68)
T 1chc_A 4 VAERCPICLEDPSNYSMAL--PCLHAFCYVCITRWIR----QNPTCPLCKVP 49 (68)
T ss_dssp CCCCCSSCCSCCCSCEEET--TTTEEESTTHHHHHHH----HSCSTTTTCCC
T ss_pred CCCCCeeCCccccCCcEec--CCCCeeHHHHHHHHHh----CcCcCcCCChh
Confidence 4568999988654212223 4667899999864221 23579999643
No 121
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=36.54 E-value=21 Score=22.57 Aligned_cols=31 Identities=23% Similarity=0.396 Sum_probs=22.5
Q ss_pred CCceeeccCC-CCeEEeeCCCCCcccccccccCCC
Q 041295 40 EEPCIKCNRR-DESLLVCIQSGCPISVHENCLSCG 73 (209)
Q Consensus 40 eD~CikC~kd-Gq~LL~Cs~~gCPlAvH~kClg~s 73 (209)
-..|-.|++- =+ =+.|. .|-+.+|.+|....
T Consensus 14 pt~C~~C~~~l~q-G~~C~--~C~~~~H~~C~~~v 45 (52)
T 1faq_A 14 LAFCDICQKFLLN-GFRCQ--TCGYKFHEHCSTKV 45 (52)
T ss_dssp CEECTTSSSEECS-EEECT--TTTCCBCSTTSSSS
T ss_pred CcCCCCccccccc-CCEeC--CCCCeEChhHHhhC
Confidence 3456666541 15 56999 99999999999853
No 122
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=35.81 E-value=53 Score=21.88 Aligned_cols=31 Identities=26% Similarity=0.594 Sum_probs=24.3
Q ss_pred CCCceeeccC--CC---CeEEeeCCCCCcccccccccCC
Q 041295 39 EEEPCIKCNR--RD---ESLLVCIQSGCPISVHENCLSC 72 (209)
Q Consensus 39 neD~CikC~k--dG---q~LL~Cs~~gCPlAvH~kClg~ 72 (209)
.-..|-.|++ -| | =+.|. .|-+.+|++|...
T Consensus 22 ~pt~C~~C~~~l~Gl~~q-g~~C~--~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 22 SPTFCEHCGTLLWGLARQ-GLKCD--ACGMNVHHRCQTK 57 (65)
T ss_dssp SCCBCSSSCCBCCCSSSC-SEEES--SSCCEECTTTTTT
T ss_pred CCcCchhcChhheecCCc-ccccC--CCCCccCHhHHhh
Confidence 4466888876 23 5 56899 9999999999985
No 123
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=35.07 E-value=15 Score=23.86 Aligned_cols=48 Identities=23% Similarity=0.425 Sum_probs=29.6
Q ss_pred CCCceeeccCC----CCeEEeeCCCCCcccccccccCCC---Cc------cCCCCCccccccchhh
Q 041295 39 EEEPCIKCNRR----DESLLVCIQSGCPISVHENCLSCG---VK------SDDVGNIYCPYFWYKC 91 (209)
Q Consensus 39 neD~CikC~kd----Gq~LL~Cs~~gCPlAvH~kClg~s---l~------~dd~GnfYCPyC~ykk 91 (209)
....|..|++. +. ++.-. -..+|..|+.+. .. +...|..||..|..+.
T Consensus 4 ~~~~C~~C~~~I~~~~~-~~~a~----~~~~H~~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~~ 64 (72)
T 1wyh_A 4 GSSGCSACGETVMPGSR-KLEYG----GQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYENK 64 (72)
T ss_dssp CCCBCSSSCCBCCSSSC-EECST----TCCEETTTCBCTTTCCBTTTSCEEEETTEEEEHHHHHHH
T ss_pred cCCCCccCCCccccCcc-EEEEC----ccccCcccCeECCCCCcCCCCccCCcCCeEECHHHHHHH
Confidence 45689999883 34 55444 257898887752 11 2335677888777543
No 124
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.06 E-value=10 Score=25.37 Aligned_cols=52 Identities=21% Similarity=0.370 Sum_probs=31.4
Q ss_pred CCCCCCceeeccCCCCe--E-EeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 36 DLLEEEPCIKCNRRDES--L-LVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 36 d~~neD~CikC~kdGq~--L-L~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
...+...|.+|...=.. . ..-- .|--.||..|+..-.... .+...||+|...
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~--~CgH~fC~~Ci~~~~~~~-~~~~~CP~Cr~~ 65 (88)
T 2ct2_A 11 ALREVLECPICMESFTEEQLRPKLL--HCGHTICRQCLEKLLASS-INGVRCPFCSKI 65 (88)
T ss_dssp CCCSCCBCTTTCCBCCTTSSCEEEC--SSSCEEEHHHHHHHHHHC-SSCBCCTTTCCC
T ss_pred hccCCCCCccCCccccccCCCeEEC--CCCChhhHHHHHHHHHcC-CCCcCCCCCCCc
Confidence 33467789999874321 0 1111 355788899987433221 356899999854
No 125
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=32.80 E-value=21 Score=24.39 Aligned_cols=33 Identities=24% Similarity=0.679 Sum_probs=25.2
Q ss_pred CCCCceeeccC---CCCeEEeeCCCCCcccccccccCC
Q 041295 38 LEEEPCIKCNR---RDESLLVCIQSGCPISVHENCLSC 72 (209)
Q Consensus 38 ~neD~CikC~k---dGq~LL~Cs~~gCPlAvH~kClg~ 72 (209)
..-..|..|++ -|..-+.|. .|.+..|.+|-..
T Consensus 17 ~~~~~C~~Cg~~i~~gkq~~kC~--dC~~~cH~~C~~~ 52 (61)
T 4b6d_A 17 IKPESCVPCGKRIKFGKLSLKCR--DCRVVSHPECRDR 52 (61)
T ss_dssp CSCEECTTTCCEECTTCEEEEES--SSSCEECGGGGGG
T ss_pred cCCcccccccCEEEEeeEeeECC--CCCCeEchhHhhc
Confidence 34567888865 343378999 9999999999763
No 126
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.29 E-value=41 Score=23.55 Aligned_cols=31 Identities=19% Similarity=0.576 Sum_probs=24.6
Q ss_pred CCCceeeccC--CC---CeEEeeCCCCCcccccccccCC
Q 041295 39 EEEPCIKCNR--RD---ESLLVCIQSGCPISVHENCLSC 72 (209)
Q Consensus 39 neD~CikC~k--dG---q~LL~Cs~~gCPlAvH~kClg~ 72 (209)
.-..|-.|++ -| + =+.|. .|-+.+|.+|...
T Consensus 27 ~pt~C~~C~~~lwGl~kq-g~~C~--~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 27 QPTFCSVCKDFVWGLNKQ-GYKCR--QCNAAIHKKCIDK 62 (83)
T ss_dssp SCCCCSSSCCCCCSSSCC-EEEET--TTCCEECTTGGGT
T ss_pred CCcChhhcChhhcccccc-ccccC--CcCCeeChhhhhh
Confidence 4466888876 22 5 67899 9999999999985
No 127
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=31.75 E-value=16 Score=28.51 Aligned_cols=52 Identities=17% Similarity=0.263 Sum_probs=38.0
Q ss_pred CCCCceeeccCCCC----eEEeeCCCCCcccccccccCCCCccCCCCCccccccchhh
Q 041295 38 LEEEPCIKCNRRDE----SLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 38 ~neD~CikC~kdGq----~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykk 91 (209)
.++..|+.|...=. .=..|. .|..-|=.+|-...+.....-.|.|-.|...+
T Consensus 53 ~~~~~C~~C~~~~g~l~~~g~~C~--~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k~r 108 (134)
T 1zbd_B 53 DGVNRCILCGEQLGMLGSASVVCE--DCKKNVCTKCGVETSNNRPHPVWLCKICLEQR 108 (134)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECT--TTCCEEETTSEEECCCSSSSCCEEEHHHHHHH
T ss_pred CCCccccccCCCcccccCCCCCCC--CCCcccccccCCccCCCCCccceechhhHHHH
Confidence 36789999998432 123788 89988888888865444556789999998643
No 128
>4hn5_A Glucocorticoid receptor; glucocorticoid receptor, steroid receptors, NGRE, repre transcription; HET: DNA; 1.90A {Homo sapiens} PDB: 4hn6_A*
Probab=31.72 E-value=9.2 Score=29.60 Aligned_cols=53 Identities=21% Similarity=0.473 Sum_probs=33.0
Q ss_pred CCCceeeccCCCCe----EEeeCCCCCccccc--------ccccCCC-CccCCCCCccccccchhhHH
Q 041295 39 EEEPCIKCNRRDES----LLVCIQSGCPISVH--------ENCLSCG-VKSDDVGNIYCPYFWYKCEL 93 (209)
Q Consensus 39 neD~CikC~kdGq~----LL~Cs~~gCPlAvH--------~kClg~s-l~~dd~GnfYCPyC~ykka~ 93 (209)
....|.+|+..... ++.|. +|..=|- -.|.... =..+....+.|++|.+++=.
T Consensus 28 ~~~~C~VCgd~a~G~HyGv~sC~--aCk~FFRRsv~~~~~y~C~~~~~C~i~~~~r~~Cr~CRl~KCl 93 (117)
T 4hn5_A 28 PPKLCLVCSDEASGCHYGVLTCG--SCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCL 93 (117)
T ss_dssp --CBCTTTCSBCCEEETTEEECH--HHHHHHHHHHSSCCCCCCSSSSCCCCSTTTTTTCHHHHHHHHH
T ss_pred CCCcCCcCCCcCcccccCCcccc--hhhhhhhcceecCCceecCCCCccccCcccccCCcccchHHHh
Confidence 34579999987655 78899 8963332 2354321 12244567899999987544
No 129
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=31.63 E-value=25 Score=24.28 Aligned_cols=50 Identities=14% Similarity=0.290 Sum_probs=31.9
Q ss_pred CCCCCceeeccCC----CCeEEeeCCCCCcccccccccCCC---C------ccCCCCCccccccchhh
Q 041295 37 LLEEEPCIKCNRR----DESLLVCIQSGCPISVHENCLSCG---V------KSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 37 ~~neD~CikC~kd----Gq~LL~Cs~~gCPlAvH~kClg~s---l------~~dd~GnfYCPyC~ykk 91 (209)
++....|..|++. +. ++.-. -..+|..|+.+. . -+...|..||..|..+.
T Consensus 2 s~~~~~C~~C~~~I~~~~~-~~~a~----~~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~cy~~~ 64 (101)
T 2cup_A 2 SSGSSGCVECRKPIGADSK-EVHYK----NRFWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTRE 64 (101)
T ss_dssp CSCCCBCSSSCCBCCSSSC-EEEET----TEEEETTTCCCSSSCCCTTSSCCEEETTEEECHHHHTTC
T ss_pred CCCCCcCcccCCcccCCce-EEEEC----ccChhhcCCcccccCCCCCcCeeECcCCEEEChhHhhhh
Confidence 3456789999982 44 55554 257888887752 1 12345778888887553
No 130
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=31.40 E-value=6.2 Score=27.40 Aligned_cols=39 Identities=26% Similarity=0.580 Sum_probs=24.6
Q ss_pred CCCceeeccCCCCe--EEeeCCCCCcccccc-cccCCCCccCCCCCccccccchh
Q 041295 39 EEEPCIKCNRRDES--LLVCIQSGCPISVHE-NCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 39 neD~CikC~kdGq~--LL~Cs~~gCPlAvH~-kClg~sl~~dd~GnfYCPyC~yk 90 (209)
++..|.+|-..-.. +++|. |. -|..+.... +.||+|...
T Consensus 17 ~~~~C~IC~~~~~~~v~~pCg--------H~~~C~~C~~~~-----~~CP~Cr~~ 58 (79)
T 2yho_A 17 EAMLCMVCCEEEINSTFCPCG--------HTVCCESCAAQL-----QSCPVCRSR 58 (79)
T ss_dssp HHTBCTTTSSSBCCEEEETTC--------BCCBCHHHHTTC-----SBCTTTCCB
T ss_pred CCCEeEEeCcccCcEEEECCC--------CHHHHHHHHHhc-----CcCCCCCch
Confidence 45689999764333 67777 55 444443222 599999754
No 131
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=31.12 E-value=9.5 Score=24.57 Aligned_cols=48 Identities=21% Similarity=0.440 Sum_probs=28.7
Q ss_pred CCCceeeccCC---CCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 39 EEEPCIKCNRR---DESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 39 neD~CikC~kd---Gq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
++..|.+|..+ ......-. ..|--.||..|+..-. ..+...||.|...
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~-~~CgH~fC~~Ci~~~~---~~~~~~CP~Cr~~ 52 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMV-NVCGHTLCESCVDLLF---VRGAGNCPECGTP 52 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEE-CTTCCCEEHHHHHHHH---HTTSSSCTTTCCC
T ss_pred CCCcCCcCCCCccCCCccCeec-CCCCCHhHHHHHHHHH---HcCCCcCCCCCCc
Confidence 56789999872 22110000 1455778888887421 1356789999754
No 132
>4esj_A Type-2 restriction enzyme DPNI; restriction endonuclease-DNA complex, type IIM, type IIE, RE enzyme, DPNI; HET: DNA 6MA; 2.05A {Streptococcus pneumoniae}
Probab=30.45 E-value=18 Score=32.04 Aligned_cols=13 Identities=23% Similarity=0.398 Sum_probs=10.7
Q ss_pred CCCCCccccccch
Q 041295 77 DDVGNIYCPYFWY 89 (209)
Q Consensus 77 dd~GnfYCPyC~y 89 (209)
-|..+||||.|.-
T Consensus 52 ~PVaDF~C~~C~E 64 (257)
T 4esj_A 52 RPVADFYCNHCSE 64 (257)
T ss_dssp -CCCEEECTTTCC
T ss_pred CcccccccCCcch
Confidence 4789999999974
No 133
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.18 E-value=51 Score=23.28 Aligned_cols=31 Identities=23% Similarity=0.584 Sum_probs=24.6
Q ss_pred CCCceeeccC--CC---CeEEeeCCCCCcccccccccCC
Q 041295 39 EEEPCIKCNR--RD---ESLLVCIQSGCPISVHENCLSC 72 (209)
Q Consensus 39 neD~CikC~k--dG---q~LL~Cs~~gCPlAvH~kClg~ 72 (209)
.-..|-.|++ -| | =+.|. .|-+.+|.+|...
T Consensus 27 ~pt~C~~C~~~l~Gl~kq-G~~C~--~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 27 SPTFCDHCGSLLYGLIHQ-GMKCD--TCDMNVHKQCVIN 62 (85)
T ss_dssp SCCBCSSSCCBCCCSSSC-EEECS--SSCCEEETTTTTT
T ss_pred CCcCCcccCccccccccC-CCcCC--CcCCccCHhHHhh
Confidence 3466888876 23 6 67899 9999999999985
No 134
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=30.18 E-value=31 Score=21.98 Aligned_cols=48 Identities=21% Similarity=0.409 Sum_probs=29.2
Q ss_pred CCCCceeeccCC---CCeEEeeCCCCCcccccccccCCCC---------ccCCCCCccccccch
Q 041295 38 LEEEPCIKCNRR---DESLLVCIQSGCPISVHENCLSCGV---------KSDDVGNIYCPYFWY 89 (209)
Q Consensus 38 ~neD~CikC~kd---Gq~LL~Cs~~gCPlAvH~kClg~sl---------~~dd~GnfYCPyC~y 89 (209)
+....|..|++. ++.++.-. -..+|..|+.+.. -+.-.|..||..|..
T Consensus 9 ~~~~~C~~C~~~i~~~e~~~~~~----~~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~ 68 (72)
T 3f6q_B 9 SASATCERCKGGFAPAEKIVNSN----GELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQ 68 (72)
T ss_dssp CTTCBCTTTCCBCCTTCEEEEET----TEEEETTTSSCTTTCCCCGGGCCEEETTEEECHHHHH
T ss_pred cCCccchhcCccccCCceEEEeC----cCeeCcCCCcccCCCCCCCCCCeEeECCeEeCHHHHH
Confidence 345689999883 33244444 2468998877411 123457788888764
No 135
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=29.97 E-value=25 Score=23.44 Aligned_cols=32 Identities=25% Similarity=0.523 Sum_probs=24.9
Q ss_pred CCCceeeccC--CC---CeEEeeCCCCCcccccccccCCC
Q 041295 39 EEEPCIKCNR--RD---ESLLVCIQSGCPISVHENCLSCG 73 (209)
Q Consensus 39 neD~CikC~k--dG---q~LL~Cs~~gCPlAvH~kClg~s 73 (209)
.-..|-.|+. -| + -+.|. .|-+.+|++|...-
T Consensus 19 ~pt~C~~C~~~l~Gl~~q-g~~C~--~C~~~~Hk~C~~~v 55 (65)
T 3uej_A 19 SPTFCDHCGSLLWGLVKQ-GLKCE--DCGMNVHHKCREKV 55 (65)
T ss_dssp SCCBCTTTCCBCCSSSSC-EEEET--TTCCEECHHHHTTS
T ss_pred CCCcccccChhhhccCce-eeECC--CCCCeEchhHhhhC
Confidence 4456888866 23 5 78999 99999999998853
No 136
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=29.00 E-value=6.6 Score=24.66 Aligned_cols=45 Identities=24% Similarity=0.419 Sum_probs=27.7
Q ss_pred CCCceeeccCC-------CCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 39 EEEPCIKCNRR-------DESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 39 neD~CikC~kd-------Gq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
++..|.+|... ++ .+.-. .|--.||..|+..-+.. +..||.|...
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~-~~~~~--~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~ 53 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGR-LIVST--ECGHVFCSQCLRDSLKN----ANTCPTCRKK 53 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTC-CEEEE--TTSCEEEHHHHHHHHHH----CSBCTTTCCB
T ss_pred CCCCCCccChhhhCccccCC-CEEeC--CCCCchhHHHHHHHHHc----CCCCCCCCcc
Confidence 34567888763 22 22333 46678999999743322 4589999754
No 137
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=28.70 E-value=8.8 Score=24.73 Aligned_cols=46 Identities=24% Similarity=0.399 Sum_probs=30.5
Q ss_pred CCCCceeeccCC-------CCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 38 LEEEPCIKCNRR-------DESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 38 ~neD~CikC~kd-------Gq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
.++..|.+|-.. ++ .+.-- .|--.||..|+..-+. ....||.|...
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~-~~~~~--~CgH~fc~~Ci~~~~~----~~~~CP~Cr~~ 60 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGR-LIVST--ECGHVFCSQCLRDSLK----NANTCPTCRKK 60 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTC-CEEEC--TTSCEEEHHHHHHHHH----HCSBCTTTCCB
T ss_pred CCCCCCcccChhhhccccccC-CeEeC--CCCChHhHHHHHHHHH----cCCCCCCCCCc
Confidence 367789999863 33 33444 5668899999974322 22589999754
No 138
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.45 E-value=34 Score=22.16 Aligned_cols=48 Identities=19% Similarity=0.317 Sum_probs=29.4
Q ss_pred CCCceeeccCCCC---eEEeeCCCCCcccccccccCCCC---------ccCCCCCccccccchh
Q 041295 39 EEEPCIKCNRRDE---SLLVCIQSGCPISVHENCLSCGV---------KSDDVGNIYCPYFWYK 90 (209)
Q Consensus 39 neD~CikC~kdGq---~LL~Cs~~gCPlAvH~kClg~sl---------~~dd~GnfYCPyC~yk 90 (209)
....|..|++.=. .++.-. -..+|..|+.+.. -+...|..||..|..+
T Consensus 4 ~~~~C~~C~~~I~~~~~~~~a~----~~~~H~~CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~ 63 (72)
T 1x4k_A 4 GSSGCQECKKTIMPGTRKMEYK----GSSWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEK 63 (72)
T ss_dssp CCCCBSSSCCCCCSSSCEEEET----TEEEETTTTCCSSSCCCCCSSSEEEETTEEEEHHHHHH
T ss_pred cCCCCccCCCcccCCceEEEEC----cCeecccCCcccccCCccCCCccCccCCeEECHHHHhH
Confidence 3468999988322 255544 2578998887521 1234566788887754
No 139
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.36 E-value=18 Score=24.19 Aligned_cols=47 Identities=15% Similarity=0.169 Sum_probs=30.4
Q ss_pred CCCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchhh
Q 041295 38 LEEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 38 ~neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykk 91 (209)
.+...|.+|...=..-+. - .|--.||..|+..-+. ....||+|....
T Consensus 13 ~~~~~C~IC~~~~~~p~~-~--~CgH~fC~~Ci~~~~~----~~~~CP~Cr~~~ 59 (81)
T 2csy_A 13 EIPFRCFICRQAFQNPVV-T--KCRHYFCESCALEHFR----ATPRCYICDQPT 59 (81)
T ss_dssp CCCSBCSSSCSBCCSEEE-C--TTSCEEEHHHHHHHHH----HCSBCSSSCCBC
T ss_pred CCCCCCcCCCchhcCeeE-c--cCCCHhHHHHHHHHHH----CCCcCCCcCccc
Confidence 356789999774332111 2 5667889999874332 256899998653
No 140
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.20 E-value=34 Score=22.71 Aligned_cols=47 Identities=19% Similarity=0.536 Sum_probs=29.6
Q ss_pred CCceeeccC--CC----CeEEeeCCCCCcccccccccCCC---Cc------cCCCCCccccccchhh
Q 041295 40 EEPCIKCNR--RD----ESLLVCIQSGCPISVHENCLSCG---VK------SDDVGNIYCPYFWYKC 91 (209)
Q Consensus 40 eD~CikC~k--dG----q~LL~Cs~~gCPlAvH~kClg~s---l~------~dd~GnfYCPyC~ykk 91 (209)
...|..|++ .+ + .|.-. -..+|..|+.+. .. +...|..||..|..+.
T Consensus 5 ~~~C~~C~~~I~~~g~~~-~~~a~----~~~wH~~CF~C~~C~~~L~~~~f~~~~g~~yC~~cy~~~ 66 (76)
T 1x68_A 5 SSGCVACSKPISGLTGAK-FICFQ----DSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKCGSGM 66 (76)
T ss_dssp CCCCTTTCCCCCTTTTCC-EEEET----TEEEEGGGCBCTTTCCBCSSSCEEEETTEEEETTTTCCC
T ss_pred CCCCccCCCcccCCCCce-eEEEC----CcccCcccCChhhCCCcCCCCceEeECCEEECHHHhhhh
Confidence 467888888 22 4 55444 257888887752 11 2335778998887653
No 141
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.45 E-value=27 Score=23.41 Aligned_cols=48 Identities=17% Similarity=0.409 Sum_probs=29.5
Q ss_pred CCceeeccCC----CCeEEeeCCCCCcccccccccCCC---Cc------cCCCCCccccccchhhH
Q 041295 40 EEPCIKCNRR----DESLLVCIQSGCPISVHENCLSCG---VK------SDDVGNIYCPYFWYKCE 92 (209)
Q Consensus 40 eD~CikC~kd----Gq~LL~Cs~~gCPlAvH~kClg~s---l~------~dd~GnfYCPyC~ykka 92 (209)
...|..|++. +. ++.-. -..+|..|+.+. .. +...|..||+.|..+.-
T Consensus 15 ~~~C~~C~~~I~~~~~-~~~a~----~~~~H~~CF~C~~C~~~L~~~~f~~~~~~~~C~~c~~~~~ 75 (82)
T 2ehe_A 15 ANTCAECQQLIGHDSR-ELFYE----DRHFHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYCSAF 75 (82)
T ss_dssp SCBCTTTCCBCCSSCC-BCCCS----SCCCBTTTSBCTTTCCBCSSCCEEEETTEEEETTTSSCCG
T ss_pred CCcCccCCCccccCcE-EEEeC----CccccccCCeecCCCCccCCCccEeeCCEEECHHHHhhhc
Confidence 3578888872 44 44433 257888887642 11 23456779999986654
No 142
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.32 E-value=34 Score=22.79 Aligned_cols=46 Identities=20% Similarity=0.346 Sum_probs=28.4
Q ss_pred CCceeeccC--CCCeEEeeCCCCCcccccccccCC---CCcc-------CCCCCccccccchh
Q 041295 40 EEPCIKCNR--RDESLLVCIQSGCPISVHENCLSC---GVKS-------DDVGNIYCPYFWYK 90 (209)
Q Consensus 40 eD~CikC~k--dGq~LL~Cs~~gCPlAvH~kClg~---sl~~-------dd~GnfYCPyC~yk 90 (209)
...|..|++ .|+ .|.-. -..+|..|+-+ ...+ ...|..||+.|..+
T Consensus 5 ~~~C~~C~~~I~~~-~v~a~----~~~wH~~CF~C~~C~~~L~~~~~f~~~~~~~yC~~C~~~ 62 (73)
T 1wig_A 5 SSGCDSCEKYITGR-VLEAG----EKHYHPSCALCVRCGQMFAEGEEMYLQGSSIWHPACRQA 62 (73)
T ss_dssp CCSCSSSCCCCSSC-CBCCS----SCCBCTTTSCCSSSCCCCCSSCCCEEETTEEECTTHHHH
T ss_pred cCCcccCCCEecCe-eEEeC----CCCCCCCcCEeCCCCCCCCCCCeeEeeCCEEEChHHChH
Confidence 357888887 344 44322 36789888774 1222 23567899999754
No 143
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=27.04 E-value=62 Score=25.00 Aligned_cols=51 Identities=24% Similarity=0.458 Sum_probs=33.6
Q ss_pred CCCCCceeeccC--CCCeEEeeCCCCCcccccccccCCC--------CccCCCCCccccccchhh
Q 041295 37 LLEEEPCIKCNR--RDESLLVCIQSGCPISVHENCLSCG--------VKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 37 ~~neD~CikC~k--dGq~LL~Cs~~gCPlAvH~kClg~s--------l~~dd~GnfYCPyC~ykk 91 (209)
......|..|++ .+..+|.-. -..+|..|+-+. ..|.-.|..||..|..+.
T Consensus 57 ~~~~~~C~~C~~~I~~~~~~~a~----~~~wH~~CF~C~~C~~~L~~~~f~~~g~~yC~~~y~~~ 117 (182)
T 2jtn_A 57 TPEIPMCAGCDQHILDRFILKAL----DRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKR 117 (182)
T ss_dssp CCSCCBCBTSSSBCCCSEEEEET----TEEECSSTTSCTTTCCCCSSCCEEETTEEECHHHHHHT
T ss_pred CCCCCcCccCCCCccCceeEEec----CCeEccccCccCCCCCccCCCceeECCEeeecCccccc
Confidence 345689999998 233255444 367888888752 124456888999888653
No 144
>3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A*
Probab=26.17 E-value=7.3 Score=35.48 Aligned_cols=53 Identities=21% Similarity=0.424 Sum_probs=32.0
Q ss_pred CCCCCceeeccCCCCe----EEeeCCCCCccccc--------ccccCCC-CccCCCCCccccccchhh
Q 041295 37 LLEEEPCIKCNRRDES----LLVCIQSGCPISVH--------ENCLSCG-VKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 37 ~~neD~CikC~kdGq~----LL~Cs~~gCPlAvH--------~kClg~s-l~~dd~GnfYCPyC~ykk 91 (209)
+.....|.+|+..... ++.|. +|..=|. -.|.... =..+....+.|++|.|+|
T Consensus 134 ~~~~~~C~VCg~~a~g~hygv~sC~--~Ck~FFrR~~~~~~~~~C~~~~~C~i~~~~r~~C~~CR~~K 199 (467)
T 3dzy_A 134 SFTKHICAICGDRSSGKHYGVYSCE--GCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQK 199 (467)
T ss_dssp ---CEECTTTSSEECSEETTEECCH--HHHHHHHHHHHTTCCCCCSSSSCCCCCSSSSSSCHHHHHHH
T ss_pred CCCCCcceeCCCCCCCCcCCCcchh--hhhHhccccccCCCceeCCCCCCCCCCcccccccccchhhh
Confidence 3456679999985443 88899 8953222 2354321 122456788999999854
No 145
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=25.45 E-value=19 Score=27.61 Aligned_cols=50 Identities=18% Similarity=0.462 Sum_probs=38.4
Q ss_pred cCCCCCCCceeeccCC------CCeEEeeCCCCCcccccccccCCCCccCCCCCccccccc
Q 041295 34 DVDLLEEEPCIKCNRR------DESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFW 88 (209)
Q Consensus 34 ~~d~~neD~CikC~kd------Gq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ 88 (209)
+.-.++.-+|-+|+.+ |+-.+-|. .|.+.+=..|.... ...|+-.||-|-
T Consensus 10 p~~~~~~qiCqiCGD~VG~~~~Ge~FVAC~--eC~FPvCrpCyEYE---rkeG~q~CpqCk 65 (93)
T 1weo_A 10 PLKNLDGQFCEICGDQIGLTVEGDLFVACN--ECGFPACRPCYEYE---RREGTQNCPQCK 65 (93)
T ss_dssp CCSCCSSCBCSSSCCBCCBCSSSSBCCSCS--SSCCCCCHHHHHHH---HHTSCSSCTTTC
T ss_pred cccccCCCccccccCccccCCCCCEEEeee--ccCChhhHHHHHHH---HhccCccccccC
Confidence 3344467799999985 66466788 89999988888754 337999999996
No 146
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=24.70 E-value=9.6 Score=25.73 Aligned_cols=40 Identities=23% Similarity=0.507 Sum_probs=25.7
Q ss_pred CCCceeeccCCCCe--EEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 39 EEEPCIKCNRRDES--LLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 39 neD~CikC~kdGq~--LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
++..|.+|-..-.. +|.|. -..|...|+.. . ..||.|.-.
T Consensus 23 ~~~~C~iC~~~~~~~~~~pCg----H~~~C~~C~~~---~-----~~CP~Cr~~ 64 (74)
T 4ic3_A 23 EEKLCKICMDRNIAIVFVPCG----HLVTCKQCAEA---V-----DKCPMCYTV 64 (74)
T ss_dssp HHTBCTTTSSSBCCEEEETTC----CBCCCHHHHTT---C-----SBCTTTCCB
T ss_pred cCCCCCCCCCCCCCEEEcCCC----ChhHHHHhhhc---C-----ccCCCcCcC
Confidence 46789999875443 56666 11255566553 2 789999743
No 147
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=24.20 E-value=33 Score=21.95 Aligned_cols=46 Identities=17% Similarity=0.401 Sum_probs=27.7
Q ss_pred CCceeeccC--CCCeEEeeCCCCCcccccccccCCC---------CccCCCCCccccccchh
Q 041295 40 EEPCIKCNR--RDESLLVCIQSGCPISVHENCLSCG---------VKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 40 eD~CikC~k--dGq~LL~Cs~~gCPlAvH~kClg~s---------l~~dd~GnfYCPyC~yk 90 (209)
...|..|++ .|+ .+.-. -..+|..|+.+. .-+...|..||..|..+
T Consensus 5 ~~~C~~C~~~I~~~-~~~a~----~~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~~ 61 (66)
T 1nyp_A 5 VPICGACRRPIEGR-VVNAM----GKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQ 61 (66)
T ss_dssp CCEETTTTEECCSC-EECCT----TSBEETTTCBCTTTCCBCSSSCCEEETTEEECHHHHHH
T ss_pred CCCCcccCCEecce-EEEEC----ccccccCcCEECCCCCCCCCCceEeECCcEECHHHHHH
Confidence 456778876 444 44333 247888887652 12234577888888754
No 148
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=23.58 E-value=29 Score=30.69 Aligned_cols=40 Identities=25% Similarity=0.517 Sum_probs=24.8
Q ss_pred CCCceeeccCCCCe--EEeeCCCCCcccccccccCCCCccCCCCCccccccchh
Q 041295 39 EEEPCIKCNRRDES--LLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 39 neD~CikC~kdGq~--LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~yk 90 (209)
++..|.+|-..-.. +|+|.- ..|...|+. .. +.||.|.-.
T Consensus 294 ~~~~C~IC~~~~~~~v~lpCgH----~~fC~~C~~---~~-----~~CP~CR~~ 335 (345)
T 3t6p_A 294 EERTCKVCMDKEVSVVFIPCGH----LVVCQECAP---SL-----RKCPICRGI 335 (345)
T ss_dssp TTCBCTTTSSSBCCEEEETTCC----EEECTTTGG---GC-----SBCTTTCCB
T ss_pred CCCCCCccCCcCCceEEcCCCC----hhHhHHHHh---cC-----CcCCCCCCC
Confidence 56789999875443 566761 114444544 22 789999754
No 149
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=23.46 E-value=26 Score=23.23 Aligned_cols=44 Identities=25% Similarity=0.625 Sum_probs=26.6
Q ss_pred ceeeccCC---CCeEEeeCCCCCcccccccccCCC---C------ccCCCCCcccc-ccchh
Q 041295 42 PCIKCNRR---DESLLVCIQSGCPISVHENCLSCG---V------KSDDVGNIYCP-YFWYK 90 (209)
Q Consensus 42 ~CikC~kd---Gq~LL~Cs~~gCPlAvH~kClg~s---l------~~dd~GnfYCP-yC~yk 90 (209)
.|..|++. ++ .|.-. -..+|..|+.+. . -+...|..||. .|..+
T Consensus 2 ~C~~C~~~I~~~~-~v~a~----~~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~~cy~~ 58 (76)
T 1iml_A 2 KCPKCDKEVYFAE-RVTSL----GKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYSA 58 (76)
T ss_dssp BCTTTSSBCCGGG-EEEET----TEEEETTTCBCTTTCCBCCTTTEEEETTEEEETTTHHHH
T ss_pred cCCCCCCEEECce-EEEEC----CccccCCCCCccccCccCCCCceECcCCeEeeCHHHHHH
Confidence 47777773 55 44433 367888887641 1 22345778888 58754
No 150
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=23.28 E-value=35 Score=22.82 Aligned_cols=18 Identities=22% Similarity=0.235 Sum_probs=12.7
Q ss_pred CccCC-CCCccccccchhh
Q 041295 74 VKSDD-VGNIYCPYFWYKC 91 (209)
Q Consensus 74 l~~dd-~GnfYCPyC~ykk 91 (209)
..|++ ..+|-||.|-..+
T Consensus 28 t~f~~lP~dw~CP~Cg~~K 46 (52)
T 1e8j_A 28 TKFEDLPDDWACPVCGASK 46 (52)
T ss_dssp CCTTSSCTTCCCSSSCCCT
T ss_pred CchHHCCCCCcCCCCCCcH
Confidence 34444 5689999998654
No 151
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=22.96 E-value=43 Score=25.61 Aligned_cols=49 Identities=24% Similarity=0.501 Sum_probs=30.2
Q ss_pred CCCceeeccC--CCCeEEeeCCCCCcccccccccCCC--------CccCCCCCccccccchhh
Q 041295 39 EEEPCIKCNR--RDESLLVCIQSGCPISVHENCLSCG--------VKSDDVGNIYCPYFWYKC 91 (209)
Q Consensus 39 neD~CikC~k--dGq~LL~Cs~~gCPlAvH~kClg~s--------l~~dd~GnfYCPyC~ykk 91 (209)
....|..|++ .+..+|.-. -..+|..|+-+. ..|.-.|..||..|..+.
T Consensus 5 ~~~~C~~C~~~I~~~~~~~a~----~~~wH~~CF~C~~C~~~L~~~~f~~~g~~yC~~~y~~~ 63 (169)
T 2rgt_A 5 EIPMCAGCDQHILDRFILKAL----DRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKR 63 (169)
T ss_dssp --CBBSSSSSBCCSSSCEECS----SCEECTTTSBCTTTCCBCCSCCEESSSCEECHHHHHHH
T ss_pred CCCccccCCCccCCcEEEEEC----CcEEccccCccCCCCCcCCCCCcccCCeeeeccccccc
Confidence 3568999987 222244333 257888887641 125567889999988653
No 152
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=22.75 E-value=33 Score=26.37 Aligned_cols=11 Identities=18% Similarity=0.646 Sum_probs=8.8
Q ss_pred CCccccccchh
Q 041295 80 GNIYCPYFWYK 90 (209)
Q Consensus 80 GnfYCPyC~yk 90 (209)
-++.||+||.-
T Consensus 9 ~D~~CP~cy~~ 19 (208)
T 3kzq_A 9 HDPMCSWCWGY 19 (208)
T ss_dssp ECTTCHHHHHH
T ss_pred ECCCCchhhhh
Confidence 47899999954
No 153
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.43 E-value=35 Score=23.54 Aligned_cols=31 Identities=32% Similarity=0.583 Sum_probs=24.7
Q ss_pred CCCceeeccC--CC---CeEEeeCCCCCcccccccccCC
Q 041295 39 EEEPCIKCNR--RD---ESLLVCIQSGCPISVHENCLSC 72 (209)
Q Consensus 39 neD~CikC~k--dG---q~LL~Cs~~gCPlAvH~kClg~ 72 (209)
.-..|-.|++ -| | =+.|. .|-+.+|++|...
T Consensus 27 ~pt~C~~C~~~lwGl~kq-G~~C~--~C~~~~Hk~C~~~ 62 (74)
T 2db6_A 27 KPKFCDVCARMIVLNNKF-GLRCK--NCKTNIHEHCQSY 62 (74)
T ss_dssp SCEECSSSCCEECHHHHE-EEEES--SSCCEECTTTTGG
T ss_pred CCcCchhcChhhccccCC-ccccC--CCCCccChhHHhh
Confidence 3467888876 33 5 67999 9999999999884
No 154
>3g9m_A Glucocorticoid receptor; glucocorticoid, DNA-binding, allostery, lever ARM, transcription, hormone; HET: DNA; 1.61A {Rattus norvegicus} SCOP: g.39.1.2 PDB: 3g6p_A* 3g6q_B* 3g6r_B* 3g6u_A* 3g8u_A* 3g8x_A* 3g97_B* 3g99_A* 3g9i_A* 3g9j_A* 3fyl_A* 3g9o_B* 3g9p_B* 3g6t_A* 1r4o_A 1r4r_A 1glu_A* 1gdc_A 2gda_A 1rgd_A ...
Probab=22.33 E-value=15 Score=26.76 Aligned_cols=51 Identities=22% Similarity=0.492 Sum_probs=32.5
Q ss_pred CceeeccCCCCe----EEeeCCCCCccccc--------ccccCCC-CccCCCCCccccccchhhHH
Q 041295 41 EPCIKCNRRDES----LLVCIQSGCPISVH--------ENCLSCG-VKSDDVGNIYCPYFWYKCEL 93 (209)
Q Consensus 41 D~CikC~kdGq~----LL~Cs~~gCPlAvH--------~kClg~s-l~~dd~GnfYCPyC~ykka~ 93 (209)
.+|.+|+..... ++.|. +|..=|. -.|.... =..+....+.|++|.+++=.
T Consensus 3 ~~C~VCg~~a~g~hyGv~sC~--~Ck~FFRR~v~~~~~~~C~~~~~C~i~~~~r~~C~~CR~~KCl 66 (90)
T 3g9m_A 3 HMCLVCSDEASGCHYGVLTCG--SCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCL 66 (90)
T ss_dssp CBCTTTCSBCCEEETTEEECH--HHHHHHHHHHHSCCCCCCSSSSCCCCCTTGGGTCHHHHHHHHH
T ss_pred CcCccCCCcCcccccCCccch--hHhHHhhhhhhcCCceeCCCCCccccCcccccCCcchhhHHHH
Confidence 579999886654 78899 8863332 2354321 12234567899999988644
No 155
>1a6y_A Orphan nuclear receptor NR1D1; orphan receptor, DNA-binding, reverb, REV- ERB, transcription regulation, transcription/DNA complex; HET: DNA 5IU; 2.30A {Homo sapiens} SCOP: g.39.1.2 PDB: 1ga5_A* 1hlz_A
Probab=22.27 E-value=13 Score=27.56 Aligned_cols=50 Identities=20% Similarity=0.353 Sum_probs=31.0
Q ss_pred CceeeccCCCCe----EEeeCCCCCccccc--------c-cccCCC-CccCCCCCccccccchhhH
Q 041295 41 EPCIKCNRRDES----LLVCIQSGCPISVH--------E-NCLSCG-VKSDDVGNIYCPYFWYKCE 92 (209)
Q Consensus 41 D~CikC~kdGq~----LL~Cs~~gCPlAvH--------~-kClg~s-l~~dd~GnfYCPyC~ykka 92 (209)
..|.+|+..... ++.|. +|-.=|- - .|.... =..+....+.|++|-|++=
T Consensus 8 ~~C~VCg~~a~g~hyGv~sC~--aCk~FFRR~v~~~~~y~~C~~~~~C~i~~~~r~~C~~CR~~KC 71 (94)
T 1a6y_A 8 LLCKVCGDVASGFHYGVLACE--GCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFKKC 71 (94)
T ss_dssp CBCTTTSSBCCEEETTEEECH--HHHHHHHHHHSSCCCCCCCSSTTCCCCCTTTTTSCHHHHHHHH
T ss_pred CcCcEeCCCCcceEeCccchh--hhhhehheeeecccceEEccCCCCCccCccccccccchhHHHh
Confidence 479999986554 78888 7854221 1 354311 1123456678999988754
No 156
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=22.19 E-value=33 Score=26.08 Aligned_cols=16 Identities=13% Similarity=0.279 Sum_probs=11.1
Q ss_pred ccCCCCCccccccchh
Q 041295 75 KSDDVGNIYCPYFWYK 90 (209)
Q Consensus 75 ~~dd~GnfYCPyC~yk 90 (209)
..+--.++.||+|+..
T Consensus 9 ~I~~f~D~~CP~C~~~ 24 (216)
T 2in3_A 9 VLWYIADPMCSWCWGF 24 (216)
T ss_dssp EEEEEECTTCHHHHHH
T ss_pred eEEEEECCCCchhhcc
Confidence 3344568899999944
No 157
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=21.49 E-value=17 Score=27.26 Aligned_cols=17 Identities=24% Similarity=0.237 Sum_probs=12.4
Q ss_pred CccCCCCCccccccchh
Q 041295 74 VKSDDVGNIYCPYFWYK 90 (209)
Q Consensus 74 l~~dd~GnfYCPyC~yk 90 (209)
+....-.++.||||+.-
T Consensus 13 ~~i~~f~D~~Cp~C~~~ 29 (186)
T 3bci_A 13 PLVVVYGDYKCPYCKEL 29 (186)
T ss_dssp CEEEEEECTTCHHHHHH
T ss_pred eEEEEEECCCChhHHHH
Confidence 44555678999999744
No 158
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=20.87 E-value=44 Score=23.17 Aligned_cols=32 Identities=19% Similarity=0.552 Sum_probs=25.1
Q ss_pred CCCCceeeccC--C---CCeEEeeCCCCCcccccccccCC
Q 041295 38 LEEEPCIKCNR--R---DESLLVCIQSGCPISVHENCLSC 72 (209)
Q Consensus 38 ~neD~CikC~k--d---Gq~LL~Cs~~gCPlAvH~kClg~ 72 (209)
..-..|-.|++ - -| =+.|. .|-+.+|.+|...
T Consensus 32 ~~pt~C~~C~~~lwGl~kq-G~~C~--~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 32 PQPTFCSVCHEFVWGLNKQ-GYQCR--QCNAAIHKKCIDK 68 (77)
T ss_dssp SSCEECSSSCCEECCTTCC-EEECS--SSCCEEESGGGSS
T ss_pred CCCcCccccChhhcccccc-ccCcC--CCCCcCCHhHHhh
Confidence 34567888876 2 25 67899 9999999999985
No 159
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=20.59 E-value=9.5 Score=27.05 Aligned_cols=49 Identities=16% Similarity=0.305 Sum_probs=33.9
Q ss_pred CCCceeeccCCCCeEEeeCCCCCcccccccccCCCCccCCCCCccccccchhhH
Q 041295 39 EEEPCIKCNRRDESLLVCIQSGCPISVHENCLSCGVKSDDVGNIYCPYFWYKCE 92 (209)
Q Consensus 39 neD~CikC~kdGq~LL~Cs~~gCPlAvH~kClg~sl~~dd~GnfYCPyC~ykka 92 (209)
++..|.+|-..=..-+.|. .|--.||..|+..-... ....||.|.....
T Consensus 21 ~~~~C~IC~~~~~~p~~~~--~CgH~FC~~Ci~~~~~~---~~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 21 EVFRCFICMEKLRDARLCP--HCSKLCCFSCIRRWLTE---QRAQCPHCRAPLQ 69 (100)
T ss_dssp HHTBCTTTCSBCSSEEECT--TTCCEEEHHHHHHHHHH---TCSBCTTTCCBCC
T ss_pred CCCCCccCCccccCccccC--CCCChhhHHHHHHHHHH---CcCCCCCCCCcCC
Confidence 5678999987554344555 77788999999743322 2378999987643
No 160
>1n0z_A ZNF265; zinc finger, RNA splicing, transcription; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=20.25 E-value=31 Score=22.49 Aligned_cols=13 Identities=23% Similarity=0.335 Sum_probs=10.4
Q ss_pred CCCCcccc--ccchh
Q 041295 78 DVGNIYCP--YFWYK 90 (209)
Q Consensus 78 d~GnfYCP--yC~yk 90 (209)
..|+|.|| -|-+.
T Consensus 11 ~~GDW~C~~~~C~~~ 25 (45)
T 1n0z_A 11 SDGDWICPDKKCGNV 25 (45)
T ss_dssp CSSSCBCSSTTTCCB
T ss_pred CCCCcCCCCCCCCCE
Confidence 47999999 78654
No 161
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=20.21 E-value=35 Score=24.78 Aligned_cols=15 Identities=20% Similarity=0.352 Sum_probs=11.6
Q ss_pred CccCCCCCccccccc
Q 041295 74 VKSDDVGNIYCPYFW 88 (209)
Q Consensus 74 l~~dd~GnfYCPyC~ 88 (209)
+...+-.+|-||+|.
T Consensus 23 ~~vvEf~dy~Cp~C~ 37 (184)
T 4dvc_A 23 PVVSEFFSFYCPHCN 37 (184)
T ss_dssp CEEEEEECTTCHHHH
T ss_pred CEEEEEECCCCHhHH
Confidence 455566789999996
No 162
>3gj5_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1
Probab=20.19 E-value=17 Score=22.91 Aligned_cols=16 Identities=13% Similarity=0.189 Sum_probs=11.5
Q ss_pred CCCCccccccchhhHH
Q 041295 78 DVGNIYCPYFWYKCEL 93 (209)
Q Consensus 78 d~GnfYCPyC~ykka~ 93 (209)
+.|.|-|+.|.+...+
T Consensus 4 ~~G~W~C~~C~v~N~~ 19 (34)
T 3gj5_B 4 GSGSWDCEVCLVQNKA 19 (34)
T ss_dssp --CCEECTTTCCEECS
T ss_pred CCCceECCeeEeECcc
Confidence 6899999999887543
No 163
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=20.06 E-value=34 Score=23.13 Aligned_cols=18 Identities=17% Similarity=0.161 Sum_probs=12.7
Q ss_pred ccCC-CCCccccccchhhH
Q 041295 75 KSDD-VGNIYCPYFWYKCE 92 (209)
Q Consensus 75 ~~dd-~GnfYCPyC~ykka 92 (209)
.|++ ..+|-||.|-..+.
T Consensus 29 ~f~~lP~dw~CP~Cga~K~ 47 (55)
T 2v3b_B 29 RWEDIPADWVCPDCGVGKI 47 (55)
T ss_dssp CGGGSCTTCCCTTTCCCGG
T ss_pred ChhHCCCCCcCCCCCCCHH
Confidence 3443 56899999987653
Done!