BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>041297
KIVIARSVRPMHWCDEIALGQFIHRCHALLALKRLNESYINIWSSDHSARKRKAAAANID
DHEDSAGCSCIGKVCMVDIITFLCPCFCSFAKDSGIVRHLKPSASLLEAVDLLLGGVQNL
VILPAGIKLQPKPSLKSTFHNDSEYCWLTQEDLIRYFLNFIGLLNPTPNQPINSHNIIDD
AGILAIHYDDPAAFAIPLIAQSHIKQTSVAIVDEEGRLVGDISPFSLNSCDETVAAAIAT
LLAGDLMAYMDCGRPLKDLVRLVKQRLDEKNMVGLLELMEDDLEISSGSCSNSSSSDEES
STGSARSARSGGYSARVVHRSEAIVCYPWSSLMAVIMQALARRDRLRSMAKAENPNFCPV
RIQAKKQQLSRAVRSHWSV

High Scoring Gene Products

Symbol, full name Information P value
AT5G53750 protein from Arabidopsis thaliana 1.1e-48
CBSX5
AT4G27460
protein from Arabidopsis thaliana 7.3e-43
CBSX6
AT1G65320
protein from Arabidopsis thaliana 8.7e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041297
        (379 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2164027 - symbol:AT5G53750 "AT5G53750" species...   391  1.1e-48   2
TAIR|locus:2123999 - symbol:CBSX5 "AT4G27460" species:370...   453  7.3e-43   1
TAIR|locus:2206265 - symbol:CBSX6 "AT1G65320" species:370...   119  8.7e-05   2


>TAIR|locus:2164027 [details] [associations]
            symbol:AT5G53750 "AT5G53750" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009611
            "response to wounding" evidence=IEP;RCA] [GO:0009620 "response to
            fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
            process" evidence=RCA] [GO:0009753 "response to jasmonic acid
            stimulus" evidence=RCA] InterPro:IPR000644 Pfam:PF00571
            PROSITE:PS51371 SMART:SM00116 EMBL:CP002688 GO:GO:0009611
            IPI:IPI00537928 RefSeq:NP_200186.2 UniGene:At.29535
            ProteinModelPortal:F4JXB6 SMR:F4JXB6 EnsemblPlants:AT5G53750.1
            GeneID:835456 KEGG:ath:AT5G53750 OMA:PPEHILR Uniprot:F4JXB6
        Length = 408

 Score = 391 (142.7 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
 Identities = 103/276 (37%), Positives = 152/276 (55%)

Query:    92 KDSGIVRHLKPSASLLEAVDLLLGGVQNLV--ILPAGI--KLQPKPSLK----------- 136
             K   +V H++ S SL+EA+DL++ G QNL+  I    I  + Q +  LK           
Sbjct:   101 KSRALVVHVQSSCSLIEAIDLIIKGAQNLIVPIHTKSITKRRQQQKLLKRNVVVSLTNAT 160

Query:   137 STFHNDS-EYCWLTQEDLIRYFLNFIGLLNPTPNQPINSHNIIDDAG-ILAIHYDDPAAF 194
             ST H +S E+CW+TQED+IR+ L+ I + +P P+  I+   +I+    ILA+ Y   AA 
Sbjct:   161 STTHKNSREFCWITQEDIIRFLLDSISVFSPLPSLSISDLGVINSTHTILAVDYYSSAAS 220

Query:   195 AIPLIAQSHIKQTSVAIV----DEEGR---LVGDISPFSLNSCDETVAAAIATLLAGDLM 247
             A+  I+++ +   SVA+V    D+E     L+G+ISP +L  CDET  AA+ATL AGDLM
Sbjct:   221 AVSAISRAILDNVSVAVVGKGCDQEDPCMVLIGEISPMTLACCDETAVAAVATLSAGDLM 280

Query:   248 AYMDCGRPLKDLVRLVKQRLDEKNMVGLLELMEDDLEIXXXXXXXXXXXXXXXXXXXXXX 307
             +Y+D   P + LV +V+ RL++K MVGL+ L+ D L +                      
Sbjct:   281 SYIDGSGPPESLVGVVRNRLEDKGMVGLISLI-DSLSLSSGSSSDEESPAGKTRMTSSYG 339

Query:   308 XXXXXXXXXVVHRSEAIVCYPWSSLMAVIMQALARR 343
                      +  +S AIVC   SSLMAV++QA+A R
Sbjct:   340 RSVSSAAR-MARKSVAIVCNRKSSLMAVMIQAIAHR 374

 Score = 134 (52.2 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
 Identities = 35/110 (31%), Positives = 58/110 (52%)

Query:    28 ALLALKRLNESYINIWSSDHSARKRKAAAANIDDHEDSAGCSCIGKVCMVDIITFLCP-- 85
             A+ ALK  +E ++ +WS +H  +         DD++    C C+GK+CM D+I +L    
Sbjct:    33 AIAALKSSDEPFLTVWSCNHDEKT--------DDNDK---CECLGKICMADVICYLSKFD 81

Query:    86 ---CFCSFAKDSGI----------VRHLKPSASLLEAVDLLLGGVQNLVI 122
                   S A D+ +          V H++ S SL+EA+DL++ G QNL++
Sbjct:    82 NNVLSLSSAFDASVSVLLPKSRALVVHVQSSCSLIEAIDLIIKGAQNLIV 131

 Score = 41 (19.5 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
 Identities = 9/29 (31%), Positives = 20/29 (68%)

Query:   195 AIPLIAQSHIKQTSVAIVDEEGRLVGDIS 223
             A+ + A +H + + V ++DE+G L+G ++
Sbjct:   365 AVMIQAIAH-RVSYVWVIDEDGCLIGMVT 392


>TAIR|locus:2123999 [details] [associations]
            symbol:CBSX5 "AT4G27460" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000644 Pfam:PF00571
            PROSITE:PS51371 SMART:SM00116 EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:AL161571 EMBL:AL078467 EMBL:BT002893
            EMBL:BT020485 EMBL:BT026427 IPI:IPI00552020 PIR:T08938
            RefSeq:NP_194476.2 UniGene:At.32101 ProteinModelPortal:Q84WQ5
            SMR:Q84WQ5 IntAct:Q84WQ5 EnsemblPlants:AT4G27460.1 GeneID:828855
            KEGG:ath:AT4G27460 TAIR:At4g27460 eggNOG:NOG263557
            HOGENOM:HOG000239294 InParanoid:Q5HZ39 OMA:KSEAIVC PhylomeDB:Q84WQ5
            ProtClustDB:CLSN2680116 Genevestigator:Q84WQ5 Uniprot:Q84WQ5
        Length = 391

 Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
 Identities = 112/339 (33%), Positives = 178/339 (52%)

Query:    28 ALLALKRLNESYINIWSSDHSARKR-------KAAAANIDDH--EDSAGCSCIGKVCMVD 78
             A+ ALK   ++++++W+ +H            K + A++  H  +D     C     +  
Sbjct:    33 AIAALKSSEDTFLSVWNCNHDDDNNTECECLGKISMADVICHLSKDHDHSLC----ALNS 88

Query:    79 IITFLCPCFCSFAKDSGIVRHLKPSASLLEAVDLLLGGVQNLVILPAGIKLQPKP----- 133
              ++ L P      K   IV H++PS SL+EA+DL++ G QNL++ P   K   K      
Sbjct:    89 SVSVLLP------KTRSIVLHVQPSCSLIEAIDLIIKGAQNLIV-PIHTKPYTKKKQHND 141

Query:   134 --SLKSTFH-NDSEYCWLTQEDLIRYFLNFIGLLNPTPNQPINSHNIIDDAG-ILAIHYD 189
               S+ +T H N   +CW+TQED+I++ L FI   +P P   ++   +I+    ++A+ Y 
Sbjct:   142 NVSVTTTTHSNGQRFCWITQEDIIQFLLGFIAAFSPLPAMSLSDLGVINSTHTVVAVDYH 201

Query:   190 DPAAFAIPLIAQSHIKQTSVAIVDEEG-----RLVGDISPFSLNSCDETVAAAIATLLAG 244
               A+  +  ++ +   QTSVA+VD EG      L+G+ISP +L  CDET AAA+ATL AG
Sbjct:   202 SSASAVVSAVSNALAVQTSVAVVDGEGDDPFTSLIGEISPMTLTCCDETAAAAVATLSAG 261

Query:   245 DLMAYMDCGRPLKDLVRLVKQRLDEKNMVGLLELMEDDLEIXXXXXXXXXXXXXXXXXXX 304
             DLMAY+D   P + LV++V+ RL++K ++GL+ L +    +                   
Sbjct:   262 DLMAYIDGANPPESLVQIVRNRLEDKGLIGLMSLFDS---LSSYSTSSGYSSEEEAPVRT 318

Query:   305 XXXXXXXXXXXXVVHRSEAIVCYPWSSLMAVIMQALARR 343
                         +  +SEAIVC P SSLMAV++QA+A R
Sbjct:   319 TSYGRSMSSSARMARKSEAIVCNPKSSLMAVMIQAVAHR 357


>TAIR|locus:2206265 [details] [associations]
            symbol:CBSX6 "AT1G65320" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005773 "vacuole"
            evidence=IDA] InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371
            SMART:SM00116 GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005774 GO:GO:0005773 EMBL:AC004512 EMBL:AK117112
            IPI:IPI00524279 PIR:T02355 RefSeq:NP_176711.1 UniGene:At.35899
            UniGene:At.67954 ProteinModelPortal:Q8GZA4 SMR:Q8GZA4 PaxDb:Q8GZA4
            PRIDE:Q8GZA4 EnsemblPlants:AT1G65320.1 GeneID:842840
            KEGG:ath:AT1G65320 TAIR:At1g65320 eggNOG:NOG311373
            HOGENOM:HOG000238614 InParanoid:Q8GZA4 OMA:KLWKCDY PhylomeDB:Q8GZA4
            ProtClustDB:CLSN2679616 Genevestigator:Q8GZA4 Uniprot:Q8GZA4
        Length = 425

 Score = 119 (46.9 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
 Identities = 37/119 (31%), Positives = 59/119 (49%)

Query:   132 KPSLKSTFHNDSEYCWLTQEDLIRYFLNFIGLLNPTPNQPINSHNIIDDAGILAIHYDDP 191
             +P+   T   D ++C L++ED+IR+ +  +G L P P   I++  II+      I    P
Sbjct:   175 RPTTSMTSSRD-KFCCLSREDVIRFLIGVLGALAPLPLTSISTLGIINQ-NYNFIEASLP 232

Query:   192 AAFAI--PLIAQSHIKQTSVAIVDEEGRLVGDISPFSLNSCDETVAA-AIATLLAGDLM 247
             A  A   PL   S I        +++ +++G+IS   L  CD   AA A+A L AG  +
Sbjct:   233 AIEATRRPLCDPSAIAVLEQTENEQQFKIIGEISASKLWKCDYLAAAWALANLYAGQFV 291

 Score = 45 (20.9 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query:   320 RSEAIVCYPWSSLMAVIMQALARR 343
             RS  + C   SSL AV+ Q L+ R
Sbjct:   351 RSAPLTCKTSSSLAAVMAQMLSHR 374


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.137   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      379       348   0.00099  116 3  11 22  0.47    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  246 KB (2132 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.65u 0.08s 27.73t   Elapsed:  00:00:01
  Total cpu time:  27.65u 0.08s 27.73t   Elapsed:  00:00:01
  Start:  Fri May 10 06:42:28 2013   End:  Fri May 10 06:42:29 2013

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