Query 041298
Match_columns 157
No_of_seqs 108 out of 1081
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 05:46:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041298.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041298hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03157 spermidine hydroxycin 100.0 1.9E-34 4.1E-39 246.5 15.3 140 9-156 1-140 (447)
2 PLN02663 hydroxycinnamoyl-CoA: 100.0 5.1E-32 1.1E-36 230.3 15.0 139 9-156 1-139 (431)
3 PF02458 Transferase: Transfer 100.0 1.2E-32 2.7E-37 232.5 9.5 141 9-156 1-141 (432)
4 PLN02481 Omega-hydroxypalmitat 100.0 9.5E-31 2.1E-35 223.2 14.6 142 8-156 11-152 (436)
5 PLN00140 alcohol acetyltransfe 100.0 4.6E-30 1E-34 219.5 12.4 138 9-156 1-142 (444)
6 PF11631 DUF3255: Protein of u 41.1 24 0.00051 24.6 2.1 27 78-104 78-104 (123)
7 COG0771 MurD UDP-N-acetylmuram 34.2 57 0.0012 28.6 3.8 20 72-91 295-314 (448)
8 PF11164 DUF2948: Protein of u 30.8 61 0.0013 23.8 3.0 30 93-122 98-128 (138)
9 PRK09294 acyltransferase PapA5 29.3 96 0.0021 26.0 4.4 35 67-101 35-69 (416)
10 PF03007 WES_acyltransf: Wax e 26.5 1.2E+02 0.0025 24.2 4.2 45 44-93 19-63 (263)
11 PF01330 RuvA_N: RuvA N termin 25.8 75 0.0016 19.4 2.4 36 85-122 5-40 (61)
No 1
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional
Probab=100.00 E-value=1.9e-34 Score=246.45 Aligned_cols=140 Identities=33% Similarity=0.542 Sum_probs=119.2
Q ss_pred EEEEEecceeEeCCCCCCcCccCCCcccccccccccccEEEEecCCCCCCCCCCCCCChHHHHHHHHHHHhhhcccCcee
Q 041298 9 LSVTRQAPELIVPARPTPRELKQLSDIDDQESFRFHIPVIFLYKNNSASSPPVLKEKDPVKVIKEAISEALVYYYPFAGR 88 (157)
Q Consensus 9 ~~V~v~~~~~V~P~~~t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~~~~~~~Lk~sLs~~L~~yyplAGR 88 (157)
|.|+++++++|+|+.|||++.++||+||+ ...++|++.||||+.+... +....+++||+|||+||++|||||||
T Consensus 1 ~~v~~~~~~~v~Ps~ptp~~~~~LS~lD~-~~~~~~v~~v~fy~~~~~~-----~~~~~~~~Lk~sLs~~L~~fyplAGR 74 (447)
T PLN03157 1 MVVILKASYTVKPAKPTWTGRRSLSEWDQ-VGTITHVPTIYFYSPPWNT-----SSGSIIEILKDSLSRALVPFYPLAGR 74 (447)
T ss_pred CeEEEeccEEECCCCCCCCCccCCChhhh-ccccccCCEEEEEeCCCcc-----ccccHHHHHHHHHHHHHhhccccCEE
Confidence 67999999999999999999999999985 4578899999999764321 12356899999999999999999999
Q ss_pred eeecCCCcEEEEecCCCeEEEEEEeccChhhhcCCCCCCchhhcccCCcCCCCCCCCCCCeEEEeeee
Q 041298 89 LIEGPNRKLMVDCNGEGILFLEAEANFKLEQLGGAIQPPCPYLEQLTYNVPGSEGILGCPLLLIQVSR 156 (157)
Q Consensus 89 L~~~~~g~~~i~cn~~Gv~fveA~~~~~l~dl~~~~~~~~~~~~~L~p~~~~~~~~~~~pll~vQvT~ 156 (157)
|+.+++|+++|+|||+||+|+||+++++|+|+++. .+...+++|+|..+..++..+.|+|+||||+
T Consensus 75 l~~~~~g~~~i~c~~~Gv~fveA~~~~~l~~~~~~--~~~~~~~~l~P~~~~~~~~~~~Pll~vQvT~ 140 (447)
T PLN03157 75 LRWIGGGRLELECNAMGVLLIEAESEAKLDDFGDF--SPTPEFEYLIPSVDYTKPIHELPLLLVQLTK 140 (447)
T ss_pred EEEcCCCcEEEEECCCCeEEEEEEeCCcHHHhhcc--CCCHHHHhhcCCCCcccccccCceEEEEEEE
Confidence 99988899999999999999999999999999762 3556678899976443334568999999996
No 2
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase
Probab=99.98 E-value=5.1e-32 Score=230.35 Aligned_cols=139 Identities=37% Similarity=0.599 Sum_probs=117.1
Q ss_pred EEEEEecceeEeCCCCCCcCccCCCcccccccccccccEEEEecCCCCCCCCCCCCCChHHHHHHHHHHHhhhcccCcee
Q 041298 9 LSVTRQAPELIVPARPTPRELKQLSDIDDQESFRFHIPVIFLYKNNSASSPPVLKEKDPVKVIKEAISEALVYYYPFAGR 88 (157)
Q Consensus 9 ~~V~v~~~~~V~P~~~t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~~~~~~~Lk~sLs~~L~~yyplAGR 88 (157)
|+|+++++++|+|+.|||++.++||+|| +.+..+|++.++||+.+... .....++||+|||++|++|||||||
T Consensus 1 ~~v~~~~~~~V~Ps~ptp~~~~~LS~lD-~~~~~~~~~~v~fY~~~~~~------~~~~~~~Lk~sLs~~L~~~yplaGR 73 (431)
T PLN02663 1 MIINVRESTMVRPAEETPRRGLWNSNVD-LVVPRFHTPSVYFYRPTGAS------NFFDPQVMKEALSKALVPFYPMAGR 73 (431)
T ss_pred CeEEEcCcEEECCCCCCCCCcccCChhh-cccccccccEEEEEcCCCCC------CccCHHHHHHHHHHHHhhcccccee
Confidence 6799999999999999999999999998 55678999999999975421 1123589999999999999999999
Q ss_pred eeecCCCcEEEEecCCCeEEEEEEeccChhhhcCCCCCCchhhcccCCcCCCCCCCCCCCeEEEeeee
Q 041298 89 LIEGPNRKLMVDCNGEGILFLEAEANFKLEQLGGAIQPPCPYLEQLTYNVPGSEGILGCPLLLIQVSR 156 (157)
Q Consensus 89 L~~~~~g~~~i~cn~~Gv~fveA~~~~~l~dl~~~~~~~~~~~~~L~p~~~~~~~~~~~pll~vQvT~ 156 (157)
|+.+++|+++|+|||+||.|+||+++++++|+++. . +....++|+|..+...+..+.|+|+||||+
T Consensus 74 l~~~~~g~~~i~c~~~Gv~fv~A~~~~~l~~~~~~-~-~~~~~~~l~P~~~~~~~~~~~P~l~vQvt~ 139 (431)
T PLN02663 74 LRRDEDGRIEIDCNAEGVLFVEADTPSVIDDFGDF-A-PTLELRQLIPTVDYSGGISSYPLLVLQVTH 139 (431)
T ss_pred eeECCCCCEEEEECCCCceEEEEecCCCHHHhhcc-C-CCHHHHhhcCCCCCccccccCceEEEEEEE
Confidence 99998899999999999999999999999999762 3 445567888875433333468999999996
No 3
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis []. Deacetylvindoline 4-O-acetyltransferase (2.3.1.107 from EC) catalyzes the last step in vindoline biosynthesis is also a member of this family []. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 2BGH_B 2E1U_B 2E1T_A 2E1V_A 2XR7_A 3B30_A 2RKT_A 3B2S_A 2RKV_A 2ZBA_C ....
Probab=99.98 E-value=1.2e-32 Score=232.49 Aligned_cols=141 Identities=39% Similarity=0.661 Sum_probs=109.6
Q ss_pred EEEEEecceeEeCCCCCCcCccCCCcccccccccccccEEEEecCCCCCCCCCCCCCChHHHHHHHHHHHhhhcccCcee
Q 041298 9 LSVTRQAPELIVPARPTPRELKQLSDIDDQESFRFHIPVIFLYKNNSASSPPVLKEKDPVKVIKEAISEALVYYYPFAGR 88 (157)
Q Consensus 9 ~~V~v~~~~~V~P~~~t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~~~~~~~Lk~sLs~~L~~yyplAGR 88 (157)
|+|+|.++++|+|+.++|++.++||+||.++...+|++.+|||+.+... .....++.||+|||++|++|||||||
T Consensus 1 m~v~v~~~~~V~Ps~~tp~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~-----~~~~~~~~Lk~sLs~~L~~~~~lAGr 75 (432)
T PF02458_consen 1 MKVTVLSRSLVKPSSPTPPHTLPLSNLDLQLMPPYYVPVLLFYRPPSSS-----DDSDIVDNLKESLSKTLVHYYPLAGR 75 (432)
T ss_dssp ---EEEEECEEE-STTS-TCEEE--HHHHHCCGCSEEEEEEEEE--SSC-----HHHHHHHHHHHHHHHHHTTSGGGGSE
T ss_pred CCCEEecCEEEECCCCCCCCcccCchhhcCcccccEEEEEEEecCcccc-----ccchHHHHHHHHHHHhHhhCcccCcE
Confidence 7999999999999999999999999998676788899999999987542 11225899999999999999999999
Q ss_pred eeecCCCcEEEEecCCCeEEEEEEeccChhhhcCCCCCCchhhcccCCcCCCCCCCCCCCeEEEeeee
Q 041298 89 LIEGPNRKLMVDCNGEGILFLEAEANFKLEQLGGAIQPPCPYLEQLTYNVPGSEGILGCPLLLIQVSR 156 (157)
Q Consensus 89 L~~~~~g~~~i~cn~~Gv~fveA~~~~~l~dl~~~~~~~~~~~~~L~p~~~~~~~~~~~pll~vQvT~ 156 (157)
| ++++|+++|+|||+||+|+||+++.+++|+... .++......|+|......+....|+|.||||+
T Consensus 76 l-~~~~~~~~i~c~d~Gv~f~~a~~~~~l~~~~~~-~~~~~~~~~l~p~~~~~~~~~~~Pll~vQvt~ 141 (432)
T PF02458_consen 76 L-RDPDGRLEIDCNDDGVEFVEAEADGTLDDLLDL-EPPSEFLRDLVPQLPVSSEGEDAPLLAVQVTR 141 (432)
T ss_dssp E-ESSCTTTEEEECTTTEEEEEEEESS-HHHHCSS-SCCGGGGGGGSSS-SSSEEETTEBSEEEEEEE
T ss_pred E-cccccceEEEEecCCCEEEEEecccceeecccc-ccchHHHHHHhhhcccCCcccccceeEeeeee
Confidence 9 766899999999999999999999999999874 34555567888865543333458999999996
No 4
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase
Probab=99.97 E-value=9.5e-31 Score=223.16 Aligned_cols=142 Identities=43% Similarity=0.760 Sum_probs=118.0
Q ss_pred eEEEEEecceeEeCCCCCCcCccCCCcccccccccccccEEEEecCCCCCCCCCCCCCChHHHHHHHHHHHhhhcccCce
Q 041298 8 VLSVTRQAPELIVPARPTPRELKQLSDIDDQESFRFHIPVIFLYKNNSASSPPVLKEKDPVKVIKEAISEALVYYYPFAG 87 (157)
Q Consensus 8 ~~~V~v~~~~~V~P~~~t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~~~~~~~Lk~sLs~~L~~yyplAG 87 (157)
.++|++.++.+|+|+.|||++.++||+||+. ..+|++.+|||+.+... +...++++||+||+++|++||||||
T Consensus 11 ~~~v~~~~~~~V~Ps~ptp~~~~~LS~lD~~--~~~~~~~~~fy~~~~~~-----~~~~~~~~Lk~sLs~~L~~~~plAG 83 (436)
T PLN02481 11 QLVVKQKEPELVPPAEETPKGLYFLSNLDQN--IAVIVRTVYCFKSEERG-----SNEDPVDVIKKALSKVLVHYYPLAG 83 (436)
T ss_pred ceEEEEcCCEEeCCCCCCCCCceecCccccC--cceeeeEEEEECCCCcc-----cccCHHHHHHHHHHHHhccccCCCC
Confidence 4789999999999999999999999999964 34789999999975431 1345789999999999999999999
Q ss_pred eeeecCCCcEEEEecCCCeEEEEEEeccChhhhcCCCCCCchhhcccCCcCCCCCCCCCCCeEEEeeee
Q 041298 88 RLIEGPNRKLMVDCNGEGILFLEAEANFKLEQLGGAIQPPCPYLEQLTYNVPGSEGILGCPLLLIQVSR 156 (157)
Q Consensus 88 RL~~~~~g~~~i~cn~~Gv~fveA~~~~~l~dl~~~~~~~~~~~~~L~p~~~~~~~~~~~pll~vQvT~ 156 (157)
||+.+++|+++|+|||+||+|+||+++++++|++....+....+++|+|..+...+....|+|+||||+
T Consensus 84 RL~~~~~g~~~i~c~~~Gv~fvea~~d~~l~~l~~~~~p~~~~~~~l~~~~~~~~~~~~~Pll~vQvT~ 152 (436)
T PLN02481 84 RLTISSEGKLIVDCTGEGVVFVEAEANCSIEEIGDITKPDPETLGKLVYDVPGAKNILEIPPLTAQVTR 152 (436)
T ss_pred eeeeCCCCcEEEEEcCCCeEEEEEEecCcHHHhccccCCCCHHHHHhCCCCCCcccccccceeeeccce
Confidence 999998899999999999999999999999999763223344567888765433333458999999996
No 5
>PLN00140 alcohol acetyltransferase family protein; Provisional
Probab=99.97 E-value=4.6e-30 Score=219.51 Aligned_cols=138 Identities=29% Similarity=0.433 Sum_probs=110.6
Q ss_pred EEEEEecceeEeCCCCCCcC--ccCCCcccccccccccccEEEEecCCCCCCCCCCCCCChHHHHHHHHHHHhhhcccCc
Q 041298 9 LSVTRQAPELIVPARPTPRE--LKQLSDIDDQESFRFHIPVIFLYKNNSASSPPVLKEKDPVKVIKEAISEALVYYYPFA 86 (157)
Q Consensus 9 ~~V~v~~~~~V~P~~~t~~~--~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~~~~~~~Lk~sLs~~L~~yyplA 86 (157)
|+|+++++.+|+|+.|||.+ .++||+||+ ...++|++.++||+.+.... ......+++||+|||+||++|||||
T Consensus 1 ~~v~~~s~~~V~Ps~ptp~~~~~~~LS~lD~-~~~~~~~~~~~fY~~~~~~~---~~~~~~~~~Lk~sLs~~L~~fyplA 76 (444)
T PLN00140 1 MEVSIISRELIKPSSPSIHHLKPFKLSLLDQ-LTPTTYIPMIFFYPTNNNQN---FKGLQISIQLKRSLSETLSTFYPFS 76 (444)
T ss_pred CeeEEeccceeccCCCCccccccCCCChHHh-cccccccceEEEeeCCCccc---ccchhHHHHHHHHHHHHHhhhhccC
Confidence 68999999999999999875 568999985 45688999999998754210 0123578999999999999999999
Q ss_pred eeeeecCCCcEEEEecCCCeEEEEEEeccChhhhcCCCCCCchhhcccCCcCCCC--CCCCCCCeEEEeeee
Q 041298 87 GRLIEGPNRKLMVDCNGEGILFLEAEANFKLEQLGGAIQPPCPYLEQLTYNVPGS--EGILGCPLLLIQVSR 156 (157)
Q Consensus 87 GRL~~~~~g~~~i~cn~~Gv~fveA~~~~~l~dl~~~~~~~~~~~~~L~p~~~~~--~~~~~~pll~vQvT~ 156 (157)
|||+. +++|+|||+||+|+||+++++++|+.. .+....+++|+|..... .+..+.|+|+||||+
T Consensus 77 GRl~~----~~~i~cn~~Gv~fveA~~~~~l~d~l~--~~~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvT~ 142 (444)
T PLN00140 77 GRVKD----NLIIDNYEEGVPFFETRVKGSLSDFLK--HPQLELLNKFLPCQPFSYESDPEAIPQVAIQVNT 142 (444)
T ss_pred ccccC----CceeEccCCCceEEEEEecCcHHHhcC--CCCHHHHHhhCCCCcccccCCccCCceEEEEEEE
Confidence 99986 589999999999999999999999965 23334567888854321 122457999999997
No 6
>PF11631 DUF3255: Protein of unknown function (DUF3255); InterPro: IPR021664 Members in this family of proteins are annotated as YxeF however no function is currently known. The family appears to be restricted to Bacillus. ; PDB: 2JOZ_A.
Probab=41.07 E-value=24 Score=24.63 Aligned_cols=27 Identities=37% Similarity=0.593 Sum_probs=19.0
Q ss_pred HhhhcccCceeeeecCCCcEEEEecCC
Q 041298 78 ALVYYYPFAGRLIEGPNRKLMVDCNGE 104 (157)
Q Consensus 78 ~L~~yyplAGRL~~~~~g~~~i~cn~~ 104 (157)
-|.+|||+-..|++.++|.+.-.-|++
T Consensus 78 ylg~~~plkstlkrgen~tliw~~~g~ 104 (123)
T PF11631_consen 78 YLGPYYPLKSTLKRGENGTLIWEQNGQ 104 (123)
T ss_dssp EESTT-S-EEEEEE-STT-EEEEETTE
T ss_pred EcCCCcchhhHhhcCCCCcEEEEecCc
Confidence 478999999999999988877777764
No 7
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=34.18 E-value=57 Score=28.61 Aligned_cols=20 Identities=40% Similarity=0.318 Sum_probs=16.5
Q ss_pred HHHHHHHhhhcccCceeeee
Q 041298 72 KEAISEALVYYYPFAGRLIE 91 (157)
Q Consensus 72 k~sLs~~L~~yyplAGRL~~ 91 (157)
.+++.++|..|.++.+|+..
T Consensus 295 ~e~i~~~L~~F~gl~HR~e~ 314 (448)
T COG0771 295 PEAILEALSSFTGLPHRLEF 314 (448)
T ss_pred HHHHHHHHHhCCCCCcceEE
Confidence 35688999999999998864
No 8
>PF11164 DUF2948: Protein of unknown function (DUF2948); InterPro: IPR021335 This family of proteins with unknown function appear to be restricted to Proteobacteria.
Probab=30.75 E-value=61 Score=23.81 Aligned_cols=30 Identities=30% Similarity=0.585 Sum_probs=26.5
Q ss_pred CCCcEEEEecCCCeEEEEEEe-ccChhhhcC
Q 041298 93 PNRKLMVDCNGEGILFLEAEA-NFKLEQLGG 122 (157)
Q Consensus 93 ~~g~~~i~cn~~Gv~fveA~~-~~~l~dl~~ 122 (157)
++|.+.+.+.|.|+.=++.+| ++.|.|++.
T Consensus 98 p~G~v~L~fAGgg~IrL~VE~ie~~L~D~~~ 128 (138)
T PF11164_consen 98 PAGHVLLTFAGGGAIRLEVECIEVQLRDLGR 128 (138)
T ss_pred CCcEEEEEECCCcEEEEEEEEEEEEEeecCC
Confidence 478999999999999889988 799999986
No 9
>PRK09294 acyltransferase PapA5; Provisional
Probab=29.31 E-value=96 Score=26.04 Aligned_cols=35 Identities=11% Similarity=0.096 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHHhhhcccCceeeeecCCCcEEEEe
Q 041298 67 PVKVIKEAISEALVYYYPFAGRLIEGPNRKLMVDC 101 (157)
Q Consensus 67 ~~~~Lk~sLs~~L~~yyplAGRL~~~~~g~~~i~c 101 (157)
-.++|++||.+++..|+-|..|+...++|...+..
T Consensus 35 D~~~L~~Al~~l~~rhp~Lr~~~~~~~~~~~~~~~ 69 (416)
T PRK09294 35 DIDALSDAFDALLRAHPVLAAHLEQDSDGGWELVA 69 (416)
T ss_pred CHHHHHHHHHHHHHhCHHhhEEEEECCCCceEEee
Confidence 37999999999999999999999765556544443
No 10
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins. O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity
Probab=26.54 E-value=1.2e+02 Score=24.17 Aligned_cols=45 Identities=13% Similarity=0.267 Sum_probs=33.8
Q ss_pred cccEEEEecCCCCCCCCCCCCCChHHHHHHHHHHHhhhcccCceeeeecC
Q 041298 44 HIPVIFLYKNNSASSPPVLKEKDPVKVIKEAISEALVYYYPFAGRLIEGP 93 (157)
Q Consensus 44 ~~~~v~fy~~~~~~~~~~~~~~~~~~~Lk~sLs~~L~~yyplAGRL~~~~ 93 (157)
++-.+++|..+... .....++.|++.+...+..++.|.-|++..+
T Consensus 19 hv~~~~~~~~~~~~-----~~~~~~~~l~~~~~~r~~~~p~fr~rv~~~~ 63 (263)
T PF03007_consen 19 HVGALAIFDPPTDG-----APPLDVERLRARLEARLARHPRFRQRVVRVP 63 (263)
T ss_pred eEEEEEEEEcCCCC-----CCcchHHHHHHHHHHhhccCCccccceecCC
Confidence 56778888876321 1112489999999999999999999998754
No 11
>PF01330 RuvA_N: RuvA N terminal domain; InterPro: IPR013849 In prokaryotes, RuvA, RuvB, and RuvC process the universal DNA intermediate of homologous recombination, termed Holliday junction. The tetrameric DNA helicase RuvA specifically binds to the Holliday junction and facilitates the isomerization of the junction from the stacked folded configuration to the square-planar structure []. In the RuvA tetramer, each subunit consists of three domains, I, II and III, where I and II form the major core that is responsible for Holliday junction binding and base pair rearrangements of Holliday junction executed at the crossover point, whereas domain III regulates branch migration through direct contact with RuvB. This entry represents domain I of RuvA, which has an OB-fold structure. This domain forms the RuvA tetramer contacts [].; GO: 0005524 ATP binding, 0009378 four-way junction helicase activity, 0006281 DNA repair, 0006310 DNA recombination; PDB: 1HJP_A 1D8L_B 1CUK_A 1C7Y_A 1IXR_B 2ZTC_A 2ZTD_B 2H5X_A 2ZTE_A 1BVS_E ....
Probab=25.78 E-value=75 Score=19.40 Aligned_cols=36 Identities=19% Similarity=0.337 Sum_probs=23.4
Q ss_pred CceeeeecCCCcEEEEecCCCeEEEEEEeccChhhhcC
Q 041298 85 FAGRLIEGPNRKLMVDCNGEGILFLEAEANFKLEQLGG 122 (157)
Q Consensus 85 lAGRL~~~~~g~~~i~cn~~Gv~fveA~~~~~l~dl~~ 122 (157)
+-|++.....+.+.|+|| |+-+-+--...++.++..
T Consensus 5 l~G~v~~~~~~~vvi~~~--GvGy~v~v~~~~~~~l~~ 40 (61)
T PF01330_consen 5 LKGKVVEKNPDYVVIDVN--GVGYEVFVPSNTLSELPE 40 (61)
T ss_dssp EEEEEEEEESSEEEEEET--TEEEEEEE-HHHHHTS-T
T ss_pred EEEEEEEEcCCEEEEEEC--CEEEEEEeCCchHHhCCC
Confidence 457887766678999999 565555555555666543
Done!