Query 041298
Match_columns 157
No_of_seqs 108 out of 1081
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 09:22:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041298.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041298hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 1.6E-33 5.6E-38 238.4 15.7 140 8-156 5-144 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 6.4E-29 2.2E-33 209.2 12.7 141 7-156 1-146 (421)
3 2xr7_A Malonyltransferase; xen 100.0 9.6E-29 3.3E-33 209.4 9.6 141 11-156 2-151 (453)
4 2e1v_A Acyl transferase; BAHD 100.0 1.2E-28 4.2E-33 208.9 9.6 143 9-156 5-156 (454)
5 2rkv_A Trichothecene 3-O-acety 99.8 2.8E-19 9.5E-24 151.0 9.2 121 30-156 5-143 (451)
6 1q9j_A PAPA5, polyketide synth 46.3 39 0.0013 26.5 5.8 63 28-101 6-69 (422)
7 2joz_A Hypothetical protein YX 35.2 25 0.00084 23.8 2.4 27 78-104 79-105 (135)
8 1apy_B Aspartylglucosaminidase 26.0 1.7E+02 0.0058 20.4 6.4 46 66-111 76-126 (141)
9 1k2x_B Putative L-asparaginase 21.5 1.6E+02 0.0055 20.6 4.8 48 67-114 78-125 (143)
10 3u5c_Q RP61R, 40S ribosomal pr 19.2 46 0.0016 23.5 1.5 18 67-84 77-94 (143)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=1.6e-33 Score=238.37 Aligned_cols=140 Identities=34% Similarity=0.573 Sum_probs=120.3
Q ss_pred eEEEEEecceeEeCCCCCCcCccCCCcccccccccccccEEEEecCCCCCCCCCCCCCChHHHHHHHHHHHhhhcccCce
Q 041298 8 VLSVTRQAPELIVPARPTPRELKQLSDIDDQESFRFHIPVIFLYKNNSASSPPVLKEKDPVKVIKEAISEALVYYYPFAG 87 (157)
Q Consensus 8 ~~~V~v~~~~~V~P~~~t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~~~~~~~Lk~sLs~~L~~yyplAG 87 (157)
.|+|+++++++|+|+.+||++.++||+||++ ..++|++.+|||+.+... ....+++||+|||++|++||||||
T Consensus 5 ~~~V~i~~~~~V~P~~~tp~~~~~LS~lD~~-~~~~~~~~~~~y~~~~~~------~~~~~~~Lk~sLs~~L~~f~plAG 77 (439)
T 4g22_A 5 SMKIEVKESTMVRPAQETPGRNLWNSNVDLV-VPNFHTPSVYFYRPTGSS------NFFDAKVLKDALSRALVPFYPMAG 77 (439)
T ss_dssp -CCEEEEEEEEECCSSCCCCCEECCCHHHHS-CCTTCCCEEEEECCCSCT------TTTCHHHHHHHHHHHTTTTGGGGC
T ss_pred ceEEEEeeeEEEeCCCCCCCCeecCChhHhC-ccccceeeEEEEcCCCCc------cccHHHHHHHHHHHHHhhccccce
Confidence 3789999999999999999899999999966 578899999999875321 234689999999999999999999
Q ss_pred eeeecCCCcEEEEecCCCeEEEEEEeccChhhhcCCCCCCchhhcccCCcCCCCCCCCCCCeEEEeeee
Q 041298 88 RLIEGPNRKLMVDCNGEGILFLEAEANFKLEQLGGAIQPPCPYLEQLTYNVPGSEGILGCPLLLIQVSR 156 (157)
Q Consensus 88 RL~~~~~g~~~i~cn~~Gv~fveA~~~~~l~dl~~~~~~~~~~~~~L~p~~~~~~~~~~~pll~vQvT~ 156 (157)
||+.+++|+++|+|||+||+|+||++|++++|+++ .. |...+++|+|..+...+..+.|+|+||||+
T Consensus 78 Rl~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~-~~-p~~~~~~l~p~~~~~~~~~~~pll~vQvT~ 144 (439)
T 4g22_A 78 RLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGD-FA-PTLELRRLIPAVDYSQGISSYALLVLQVTY 144 (439)
T ss_dssp EEEECTTSCEEEECCCCCEEEEEEEESSCGGGGTT-CC-CCGGGGGGSCCCCTTSCTTSSCSEEEEEEE
T ss_pred eeeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcC-CC-CCHHHHhcCCCCCcccccccCceeEEEEEE
Confidence 99998889999999999999999999999999976 33 556778898866544444578999999996
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=99.96 E-value=6.4e-29 Score=209.20 Aligned_cols=141 Identities=28% Similarity=0.435 Sum_probs=110.8
Q ss_pred eeEEEEEecceeEeCCCCCCcC--ccCCCcccccccccccccEEEEecCCCCCCCCCCCCCChHHHHHHHHHHHhhhccc
Q 041298 7 LVLSVTRQAPELIVPARPTPRE--LKQLSDIDDQESFRFHIPVIFLYKNNSASSPPVLKEKDPVKVIKEAISEALVYYYP 84 (157)
Q Consensus 7 ~~~~V~v~~~~~V~P~~~t~~~--~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~~~~~~~~Lk~sLs~~L~~yyp 84 (157)
|.|+|+++++++|+|+.+|+.+ .++||+||++ ..++|++.++||+.+.... .+....+++||+||+++|++|||
T Consensus 1 m~m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~-~~~~~~~~~~~y~~~~~~~---~~~~~~~~~Lk~sLs~~L~~~~p 76 (421)
T 2bgh_A 1 MAPQMEKVSEELILPSSPTPQSLKCYKISHLDQL-LLTCHIPFILFYPNPLDSN---LDPAQTSQHLKQSLSKVLTHFYP 76 (421)
T ss_dssp ---CEEEEEEEEEECSSCCCTTSCCCBCCHHHHT-SCSSEEEEEEEECCCSSCC---CCHHHHHHHHHHHHHHHTTTSGG
T ss_pred CCceEEEeeeEEEeCCCCCCCCCcccCCChHHhc-ccccccceEEEEeCCCccc---cchhhHHHHHHHHHHHHhhhcch
Confidence 3488999999999999988854 8999999965 5678999999998643210 01234789999999999999999
Q ss_pred CceeeeecCCCcEEEEecCCCeEEEEEEeccChhhhcCCCCCCchhhcccCCcCCCCC---CCCCCCeEEEeeee
Q 041298 85 FAGRLIEGPNRKLMVDCNGEGILFLEAEANFKLEQLGGAIQPPCPYLEQLTYNVPGSE---GILGCPLLLIQVSR 156 (157)
Q Consensus 85 lAGRL~~~~~g~~~i~cn~~Gv~fveA~~~~~l~dl~~~~~~~~~~~~~L~p~~~~~~---~~~~~pll~vQvT~ 156 (157)
|||||+. +++|+||++||.|+||++|++++|+... .++...+++|+|.....+ ...+.|++.||||+
T Consensus 77 lAGRl~~----~~~i~c~~~Gv~fv~A~~d~~l~~~~~~-~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~ 146 (421)
T 2bgh_A 77 LAGRINV----NSSVDCNDSGVPFVEARVQAQLSQAIQN-VVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISF 146 (421)
T ss_dssp GGSEEET----TTEEECCCCCEEEEEEEESSCHHHHHSC-CSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEE
T ss_pred hccccCC----CcEEEEcCCceEEEEEEEcCCHHHHhcc-CCChHHHHhcCCCCCCccccccccCCceEEEEEEE
Confidence 9999973 5999999999999999999999999762 244345778888652211 03468999999997
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=99.95 E-value=9.6e-29 Score=209.42 Aligned_cols=141 Identities=17% Similarity=0.196 Sum_probs=112.3
Q ss_pred EEEecceeEeCCCC-CCcCccCCCcccccccccccccEEEEecCCCCCCCCCCC--CCChHHHHHHHHHHHhhhcccCce
Q 041298 11 VTRQAPELIVPARP-TPRELKQLSDIDDQESFRFHIPVIFLYKNNSASSPPVLK--EKDPVKVIKEAISEALVYYYPFAG 87 (157)
Q Consensus 11 V~v~~~~~V~P~~~-t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~--~~~~~~~Lk~sLs~~L~~yyplAG 87 (157)
|+|+++++|+|+.+ ++.+.++||+||++....+|++.+|||+.+.. .+ ..+.+++||+||+++|++||||||
T Consensus 2 v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~-----~~~~~~~~~~~Lk~sLs~~L~~~~plAG 76 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSATELTLPLTYFDHVWLAFHRMRRILFYKLPIS-----RPDFVQTIIPTLKDSLSLTLKYYLPLAG 76 (453)
T ss_dssp CEEEEESCCCCCTTCCSEEEEECCHHHHGGGGSCCEEEEEEEECCCC-----SHHHHHTHHHHHHHHHHHHHTTSGGGGS
T ss_pred eEEEEEEEecCCCCCCCCceECCCHHHhhhhhcCCccEEEEEeCCCC-----CchhHHHHHHHHHHHHHHHhhhccccCe
Confidence 89999999999987 56688999999976444458999999986432 11 234789999999999999999999
Q ss_pred eeeecC--CCcEEEEec-CCCeEEEEEEeccChhhhcCCCCCCchhhcccCCcCCCCCC---CCCCCeEEEeeee
Q 041298 88 RLIEGP--NRKLMVDCN-GEGILFLEAEANFKLEQLGGAIQPPCPYLEQLTYNVPGSEG---ILGCPLLLIQVSR 156 (157)
Q Consensus 88 RL~~~~--~g~~~i~cn-~~Gv~fveA~~~~~l~dl~~~~~~~~~~~~~L~p~~~~~~~---~~~~pll~vQvT~ 156 (157)
||+.++ +|+++|+|| ++||+|+||+++++++++......+...+++|+|....... ..+.|+++||||+
T Consensus 77 Rl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~ 151 (453)
T 2xr7_A 77 NVACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTL 151 (453)
T ss_dssp CCEEESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEE
T ss_pred eEEccCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEE
Confidence 999886 899999999 59999999999999999965222355567788886542211 1128999999996
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=99.95 E-value=1.2e-28 Score=208.94 Aligned_cols=143 Identities=24% Similarity=0.273 Sum_probs=112.0
Q ss_pred EEEEEecceeEeCCCC-CCcCccCCCcccccccccccccEEEEecCCCCCCCCCCC--CCChHHHHHHHHHHHhhhcccC
Q 041298 9 LSVTRQAPELIVPARP-TPRELKQLSDIDDQESFRFHIPVIFLYKNNSASSPPVLK--EKDPVKVIKEAISEALVYYYPF 85 (157)
Q Consensus 9 ~~V~v~~~~~V~P~~~-t~~~~~~LS~lD~~~~~~~~~~~v~fy~~~~~~~~~~~~--~~~~~~~Lk~sLs~~L~~yypl 85 (157)
.+|+|+++++|+|+.+ ++.+.++||+||++....+|++.+|||+.+.. .+ ....+++||+|||++|++||||
T Consensus 5 ~~v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~-----~~~~~~~~~~~Lk~sLs~~L~~~~pl 79 (454)
T 2e1v_A 5 PILTVLEQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPIT-----RSQFTETVVPNIKHSLSITLKHFYPF 79 (454)
T ss_dssp -CEEEEEEEEECCCTTSCCCEEEECCHHHHTTTTCCCEEEEEEEECCCC-----HHHHHHTHHHHHHHHHHHHHTTCGGG
T ss_pred ceEEEEEEEEEeCCCCCCCCceecCchHHhhhhccCCccEEEEEeCCCC-----cchhhHHHHHHHHHHHHHHhhhcccc
Confidence 5799999999999987 56678999999976544568999999986432 01 2246899999999999999999
Q ss_pred ceeee-ec-CCCcEEEEec-CCCeEEEEEEeccChhhhcCCCCCCchhhcccCCcCCCCC---CCCCCCeEEEeeee
Q 041298 86 AGRLI-EG-PNRKLMVDCN-GEGILFLEAEANFKLEQLGGAIQPPCPYLEQLTYNVPGSE---GILGCPLLLIQVSR 156 (157)
Q Consensus 86 AGRL~-~~-~~g~~~i~cn-~~Gv~fveA~~~~~l~dl~~~~~~~~~~~~~L~p~~~~~~---~~~~~pll~vQvT~ 156 (157)
||||+ .+ ++|+++|+|| ++||+|+||+++++++++......+...+++|+|...... +..+.|+|+||||+
T Consensus 80 AGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~ 156 (454)
T 2e1v_A 80 VGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTL 156 (454)
T ss_dssp GSEEEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEE
T ss_pred ceeeeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEE
Confidence 99998 65 5899999999 5999999999999999996521124445678888654221 11245999999996
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=99.78 E-value=2.8e-19 Score=150.98 Aligned_cols=121 Identities=12% Similarity=0.069 Sum_probs=86.9
Q ss_pred cCCCccccccc-ccccccEEEEecCCCCCCCCCCCCCChHHHHHHHHHHHhhhcccCceeeeecC-----CCcEEEEecC
Q 041298 30 KQLSDIDDQES-FRFHIPVIFLYKNNSASSPPVLKEKDPVKVIKEAISEALVYYYPFAGRLIEGP-----NRKLMVDCNG 103 (157)
Q Consensus 30 ~~LS~lD~~~~-~~~~~~~v~fy~~~~~~~~~~~~~~~~~~~Lk~sLs~~L~~yyplAGRL~~~~-----~g~~~i~cn~ 103 (157)
++||+||++.. .++|++.++||+.+.. .+..+.+++||+|||++|++||||||||+.++ +|+++|+|++
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~~-----~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~ 79 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSDS-----SQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFE 79 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSCG-----GGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCC
T ss_pred ccCChhhcCccccccceeEEEEEECCCC-----CCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecC
Confidence 58999986642 5789999999985321 01235789999999999999999999999864 6899999888
Q ss_pred CCeEEEEEEecc-----ChhhhcCCCCCCchhhc--ccCCcC--CCC--C-CCCCCCeEEEeeee
Q 041298 104 EGILFLEAEANF-----KLEQLGGAIQPPCPYLE--QLTYNV--PGS--E-GILGCPLLLIQVSR 156 (157)
Q Consensus 104 ~Gv~fveA~~~~-----~l~dl~~~~~~~~~~~~--~L~p~~--~~~--~-~~~~~pll~vQvT~ 156 (157)
.|+.|++|+++. +++++... ..|...+. .|.|.. +.. + ...+.|+|+||||.
T Consensus 80 ~~~~~~va~~~~d~~~p~~~~l~~~-~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~ 143 (451)
T 2rkv_A 80 DVPRVVVKDLRDDPSAPTIEGMRKA-GYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNF 143 (451)
T ss_dssp SSCEEEEEECTTCTTSCBHHHHHHH-TSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEE
T ss_pred CCCeEEEEeCCCCCCCCCHHHHHHc-CCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEE
Confidence 777899999975 68888642 23433222 233321 111 1 22358999999995
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=46.28 E-value=39 Score=26.48 Aligned_cols=63 Identities=11% Similarity=0.091 Sum_probs=40.6
Q ss_pred CccCCCccccccccc-ccccEEEEecCCCCCCCCCCCCCChHHHHHHHHHHHhhhcccCceeeeecCCCcEEEEe
Q 041298 28 ELKQLSDIDDQESFR-FHIPVIFLYKNNSASSPPVLKEKDPVKVIKEAISEALVYYYPFAGRLIEGPNRKLMVDC 101 (157)
Q Consensus 28 ~~~~LS~lD~~~~~~-~~~~~v~fy~~~~~~~~~~~~~~~~~~~Lk~sLs~~L~~yyplAGRL~~~~~g~~~i~c 101 (157)
...+||.++..++.. +.+...+-++ +. .-.++|++|+.+++..++.|--|+...+++..++..
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~--g~---------ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~ 69 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLR--GV---------IDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVA 69 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEE--SC---------CCHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEE
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEe--cC---------CCHHHHHHHHHHHHHhCccceEEEEecCCcceeeec
Confidence 456788886544422 2233333333 22 137899999999999999999999876544444443
No 7
>2joz_A Hypothetical protein YXEF; structure, GFT, NESG, lipoprotein, structural genomics, PSI-2, protein structure initiative; NMR {Bacillus subtilis} SCOP: b.60.1.1
Probab=35.17 E-value=25 Score=23.83 Aligned_cols=27 Identities=37% Similarity=0.593 Sum_probs=22.7
Q ss_pred HhhhcccCceeeeecCCCcEEEEecCC
Q 041298 78 ALVYYYPFAGRLIEGPNRKLMVDCNGE 104 (157)
Q Consensus 78 ~L~~yyplAGRL~~~~~g~~~i~cn~~ 104 (157)
-|.+|||+-..|++.++|.+.-.-|++
T Consensus 79 ylg~~~p~kstlkrg~n~tliw~~~g~ 105 (135)
T 2joz_A 79 YLGPYYPLKSTLKRGENGTLIWEQNGQ 105 (135)
T ss_dssp EESTTCSCEEEEEECSTTCEEEEETTE
T ss_pred EcCCCcchhhHHhCCCCCcEEEEecCC
Confidence 478899999999999888877777764
No 8
>1apy_B Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_B*
Probab=26.00 E-value=1.7e+02 Score=20.44 Aligned_cols=46 Identities=17% Similarity=0.246 Sum_probs=32.5
Q ss_pred ChHHHHHHHHHHHhhhccc-CceeeeecCCCcEEEEecC----CCeEEEEE
Q 041298 66 DPVKVIKEAISEALVYYYP-FAGRLIEGPNRKLMVDCNG----EGILFLEA 111 (157)
Q Consensus 66 ~~~~~Lk~sLs~~L~~yyp-lAGRL~~~~~g~~~i~cn~----~Gv~fveA 111 (157)
.+-+..++++.+...+|.- ..|-+..+.+|+..+.||. .+-.|.++
T Consensus 76 ~~~~A~~~~i~~~~~~~~~~~ggvIa~d~~G~~~~~~n~~~~~~~F~~~v~ 126 (141)
T 1apy_B 76 DPTIACQKVISRIQKHFPEFFGAVICANVTGSYGAACNKLSTFTQFSFMVY 126 (141)
T ss_dssp CHHHHHHHHHHHHHHHCTTCCEEEEEEETTSCEEEEECCBTTBCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCEEEEeccCCCCCCeeEEEE
Confidence 3567888888888877754 4455667789999999997 34444444
No 9
>1k2x_B Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_B* 1t3m_B 2zal_B
Probab=21.46 E-value=1.6e+02 Score=20.60 Aligned_cols=48 Identities=15% Similarity=0.064 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHHhhhcccCceeeeecCCCcEEEEecCCCeEEEEEEec
Q 041298 67 PVKVIKEAISEALVYYYPFAGRLIEGPNRKLMVDCNGEGILFLEAEAN 114 (157)
Q Consensus 67 ~~~~Lk~sLs~~L~~yyplAGRL~~~~~g~~~i~cn~~Gv~fveA~~~ 114 (157)
+-+..++++.+.+..+.-..|=+..+..|++.+.||.+|..+..+..+
T Consensus 78 ~~eA~~~~i~~~~~~~~g~~GvIavd~~G~~~~~~nt~~m~~a~~~~~ 125 (143)
T 1k2x_B 78 LAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRAWGYAG 125 (143)
T ss_dssp HHHHHHHHHHTHHHHTTCCEEEEEEETTCCEECCBSSSEEEEEEEETT
T ss_pred HHHHHHHHHHHHHHhcCCceEEEEECCCCCEEEEEcCCCceEEEEcCC
Confidence 556777777777777666678888888899999999999887776544
No 10
>3u5c_Q RP61R, 40S ribosomal protein S16-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_I 3o30_J 3o2z_J 3u5g_Q 1s1h_I 3jyv_I*
Probab=19.18 E-value=46 Score=23.53 Aligned_cols=18 Identities=39% Similarity=0.545 Sum_probs=16.1
Q ss_pred hHHHHHHHHHHHhhhccc
Q 041298 67 PVKVIKEAISEALVYYYP 84 (157)
Q Consensus 67 ~~~~Lk~sLs~~L~~yyp 84 (157)
-..+++.++|++|+.||+
T Consensus 77 QA~AiR~aIArAL~~~~~ 94 (143)
T 3u5c_Q 77 QVYAIRQAIAKGLVAYHQ 94 (143)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHhh
Confidence 578999999999999965
Done!