BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041302
(484 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q00IB6|CPL4_ARATH RNA polymerase II C-terminal domain phosphatase-like 4
OS=Arabidopsis thaliana GN=CPL4 PE=1 SV=1
Length = 440
Score = 516 bits (1329), Expect = e-145, Method: Compositional matrix adjust.
Identities = 271/460 (58%), Positives = 329/460 (71%), Gaps = 45/460 (9%)
Query: 17 LAAFLDAELDSNSLGSSPEKEAEDKDEDEESIDEEAENEEARDDKDLERIKRRKTQIVET 76
LAAFLDAELDS S SS E E+ ++D ES +KR+K + +E
Sbjct: 18 LAAFLDAELDSASDASSGPSEEEEAEDDVES-----------------GLKRQKLEHLE- 59
Query: 77 IQERPGPTLLGNLEEKTDMLYCAEVSLEMDNCPHPGSLGGMCYRCGKRLEEESGVTFSYI 136
E S C HPGS G MC+ CG++LEE +GV+F YI
Sbjct: 60 -----------------------EASSSKGECEHPGSFGNMCFVCGQKLEE-TGVSFRYI 95
Query: 137 CKGLRLGNDEIDRLRNTDMKHLLRHRKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADS 196
K +RL DEI RLR++D + L R RKLYL+LDLDHTLLN+T+L L PEE+YLKS S
Sbjct: 96 HKEMRLNEDEISRLRDSDSRFLQRQRKLYLVLDLDHTLLNTTILRDLKPEEEYLKSHTHS 155
Query: 197 LQD---VSKGSLFMLAFMNMMTKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLD 253
LQD VS GSLF+L FM MMTKLRPFVH+FLKEASEMF MYIYTMGDR YA +MAKLLD
Sbjct: 156 LQDGCNVSGGSLFLLEFMQMMTKLRPFVHSFLKEASEMFVMYIYTMGDRNYARQMAKLLD 215
Query: 254 PSREYFNARVISRDDGTQRHQKGLDVVLGQESAVLILDDTENAWTKHRDNLILMERYHFF 313
P EYF RVISRDDGT RH+K LDVVLGQESAVLILDDTENAW KH+DNLI++ERYHFF
Sbjct: 216 PKGEYFGDRVISRDDGTVRHEKSLDVVLGQESAVLILDDTENAWPKHKDNLIVIERYHFF 275
Query: 314 ASSCRQFGYHCQSLSQLRSDESELEGALASVLKVLKRIHNIFFDELANDLAGRDVRQVLK 373
+SSCRQF + +SLS+L+SDESE +GALA+VLKVLK+ H +FF+ + ++ RDVR +LK
Sbjct: 276 SSSCRQFDHRYKSLSELKSDESEPDGALATVLKVLKQAHALFFENVDEGISNRDVRLMLK 335
Query: 374 MVRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEK 433
VR E+LKGCK+VFS VFPTK + H LWKMAE+LGATC+ E+D SVTHVV+ D TEK
Sbjct: 336 QVRKEILKGCKIVFSRVFPTKAKPEDHPLWKMAEELGATCATEVDASVTHVVAMDVGTEK 395
Query: 434 SRWAAKEAKFLVDPRWIETANFLWQRQPEENFPVQQTKPE 473
+RWA +E K++V WI+ AN+LW +QPEENF ++Q K +
Sbjct: 396 ARWAVREKKYVVHRGWIDAANYLWMKQPEENFGLEQLKKQ 435
>sp|Q8LL04|CPL3_ARATH RNA polymerase II C-terminal domain phosphatase-like 3 OS=Arabidopsis
thaliana GN=CPL3 PE=1 SV=2
Length = 1241
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 135/343 (39%), Positives = 198/343 (57%), Gaps = 20/343 (5%)
Query: 143 GNDEIDRL--------RNTDMKHLLRHRKLYLILDLDHTLLNSTLLLHL-TPEEDYLKSQ 193
G D+I R+ R + + +KL L+LD+DHTLLNS + + E+ L+ +
Sbjct: 899 GYDDIQRVAIQRERVRRLEEQNKMFASQKLSLVLDIDHTLLNSAKFNEVESRHEEILRKK 958
Query: 194 ADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLD 253
+ ++ LF M M TKLRP + FL++AS+++E+++YTMG++ YA EMAKLLD
Sbjct: 959 EEQDREKPYRHLFRFLHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKLLD 1018
Query: 254 PSREYFNARVISRDDGTQR--------HQKGLDVVLGQESAVLILDDTENAWTKHRDNLI 305
P FN RVIS+ D K L+ V+G ES+V+I+DD+ W +H+ NLI
Sbjct: 1019 PKGVLFNGRVISKGDDGDPLDGDERVPKSKDLEGVMGMESSVVIIDDSVRVWPQHKMNLI 1078
Query: 306 LMERYHFFASSCRQFGYHCQSLSQLRSDESELEGALASVLKVLKRIHNIFFDELANDLAG 365
+ERY +F S RQFG SL +L DE EG LAS L V+++IH FF + D
Sbjct: 1079 AVERYLYFPCSRRQFGLLGPSLLELDRDEVPEEGTLASSLAVIEKIHQNFFSHTSLDEV- 1137
Query: 366 RDVRQVLKMVRGEVLKGCKLVFSHVFPT-KFPADTHYLWKMAEQLGATCSIELDPSVTHV 424
DVR +L + ++L GC++VFS + P + H LW+ AEQ GA C+ ++D VTHV
Sbjct: 1138 -DVRNILASEQRKILAGCRIVFSRIIPVGEAKPHLHPLWQTAEQFGAVCTTQVDEHVTHV 1196
Query: 425 VSTDARTEKSRWAAKEAKFLVDPRWIETANFLWQRQPEENFPV 467
V+ T+K WA +F+V P W+E + FL+QR E + +
Sbjct: 1197 VTNSLGTDKVNWALTRGRFVVHPGWVEASAFLYQRANENLYAI 1239
>sp|Q9P376|FCP1_SCHPO RNA polymerase II subunit A C-terminal domain phosphatase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=fcp1 PE=1 SV=1
Length = 723
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 22/225 (9%)
Query: 108 CPHPGSLGGMCYRCGKRLEEESGVTFSYICKG----------LRLGNDEIDRLRNTDMKH 157
C H + GG+C CGK + + + +S + + L + +E RL + ++K
Sbjct: 99 CTHEVNYGGLCAICGKNITSQDYMGYSDMARANISMTHNTGDLTVSLEEASRLESENVKR 158
Query: 158 LLRHRKLYLILDLDHTLLNSTLLLHLTP-EEDYLKSQADSLQDVSKGSL------FMLAF 210
L + ++L LI+DLD T++++T+ + D D L+DV +L + +
Sbjct: 159 LRQEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCY 218
Query: 211 MNMMTKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGT 270
K RP + FL++ SE++E++IYTMG + YA E+AK++DP+ + F RV+SRDD
Sbjct: 219 Y---IKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSG 275
Query: 271 QRHQKGLDVVLG-QESAVLILDDTENAWTKHRDNLILMERYHFFA 314
QK L + S V+++DD + W NLI + Y FF
Sbjct: 276 SLAQKSLRRLFPCDTSMVVVIDDRGDVW-DWNPNLIKVVPYEFFV 319
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Query: 346 KVLKRIHNIFFDELANDLAGR-------DVRQVLKMVRGEVLKGCKLVFSHVFPTKFPAD 398
KVLK IH ++++E ND++ R +V ++ ++ +VLKGC+L+FS V P
Sbjct: 451 KVLKDIHAVYYEE-ENDISSRSGNHKHANVGLIIPKMKQKVLKGCRLLFSGVIPLGVDVL 509
Query: 399 THYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKF-LVDPRWIETANFLW 457
+ + K A GA ++ TH+++ RTEK + A +V W+ + W
Sbjct: 510 SSDIAKWAMSFGAEVVLDFSVPPTHLIAAKIRTEKVKKAVSMGNIKVVKLNWLTESLSQW 569
Query: 458 QRQPEENF 465
+R PE ++
Sbjct: 570 KRLPESDY 577
>sp|Q8SV03|FCP1_ENCCU RNA polymerase II subunit A C-terminal domain phosphatase
OS=Encephalitozoon cuniculi (strain GB-M1) GN=FCP1 PE=1
SV=1
Length = 411
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 19/211 (9%)
Query: 105 MDNCPHPGSLGGMCYRCGKRLEEESGVTFS-YICKGLRLGNDEIDRLRNTDMKHLLRHRK 163
M C HP LG +C CG ++EES + + Y +++ ++E + M+ L K
Sbjct: 1 MGGCNHPIRLGTLCGVCGMEIQEESHLFCALYNTDNVKITHEEAVAIHKEKMEALEMQMK 60
Query: 164 LYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHT 223
L L+LDLD T+L++T SL+ K F++ KLRP +
Sbjct: 61 LILVLDLDQTVLHTTY-------------GTSSLEGTVK---FVIDRCRYCVKLRPNLDY 104
Query: 224 FLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQRHQKGLDVVLGQ 283
L+ S+++E+++YTMG R YA + +++DPS +YF+ R+I+RD+ K L +
Sbjct: 105 MLRRISKLYEIHVYTMGTRAYAERIVEIIDPSGKYFDDRIITRDENQGVLVKRLSRLFPH 164
Query: 284 E-SAVLILDDTENAWTKHRDNLILMERYHFF 313
+ ++ILDD + W + +NL+L+ + +F
Sbjct: 165 DHRNIVILDDRPDVW-DYCENLVLIRPFWYF 194
>sp|Q9Y5B0|CTDP1_HUMAN RNA polymerase II subunit A C-terminal domain phosphatase OS=Homo
sapiens GN=CTDP1 PE=1 SV=3
Length = 961
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 134/279 (48%), Gaps = 47/279 (16%)
Query: 58 RDDKDLERIKRRKTQIVETIQERPGPTLLGNLEEKTDMLYCAEVSLEMDNCPHPGSLGGM 117
R + R++ + +V + +PG ++ V + ++ C HP + G+
Sbjct: 75 RPARPERRLRSERAGVVRELCAQPG-----------QVVAPGAVLVRLEGCSHPVVMKGL 123
Query: 118 CYRCGK---RLEEESG----------VTFSYICKGLRLGNDEIDRLRNTDMKHLLRHRKL 164
C CG+ +L+ ++G V+ + L + +++ ++L D + L R+RKL
Sbjct: 124 CAECGQDLTQLQSKNGKQQVPLSTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKL 183
Query: 165 YLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMN----MMTKLRPF 220
L++DLD TL+++T Q +S +F + T+LRP
Sbjct: 184 VLMVDLDQTLIHTT---------------EQHCQQMSNKGIFHFQLGRGEPMLHTRLRPH 228
Query: 221 VHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQRHQKG---L 277
FL++ ++++E++++T G R YA +A LDP ++ F+ R++SRD+ K
Sbjct: 229 CKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLR 288
Query: 278 DVVLGQESAVLILDDTENAWTKHRDNLILMERYHFFASS 316
++ +S V I+DD E+ W K NLI +++Y +F +
Sbjct: 289 NLFPCGDSMVCIIDDREDVW-KFAPNLITVKKYVYFQGT 326
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 346 KVLKRIHNIFFDELANDL-----AGRDVRQVLKMVRGEVLKGCKLVFSHVFPTKFPADTH 400
++L R+H ++ + L D+R+++ ++ +VL ++FS + PT FP +
Sbjct: 595 EILVRVHTDYYAKYDRYLNKEIEEAPDIRKIVPELKSKVLADVAIIFSGLHPTNFPIEKT 654
Query: 401 YLWKMAEQLGAT--CSIELDPS----VTHVVSTDARTEKSRWAAKEAKF-LVDPRWIETA 453
A LGA + L P TH+++ A TEK A + +V+P W+ +
Sbjct: 655 REHYHATALGAKILTRLVLSPDAPDRATHLIAARAGTEKVLQAQECGHLHVVNPDWLWSC 714
Query: 454 NFLWQRQPEENFPVQ 468
W + E+ FP++
Sbjct: 715 LERWDKVEEQLFPLR 729
>sp|Q03254|FCP1_YEAST RNA polymerase II subunit A C-terminal domain phosphatase
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=FCP1 PE=1 SV=1
Length = 732
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 26/233 (11%)
Query: 108 CPHPGSLGGMCYRCGKRLEEES--GVTFSYICK-GLRLGNDEIDRLRNTDMKHLLRHRKL 164
C H GG+C +CGK + ++ GV + L++ E R +HL R +KL
Sbjct: 116 CNHDIVYGGLCTQCGKEVSADAFDGVPLDVVGDVDLQISETEAIRTGKALKEHLRRDKKL 175
Query: 165 YLILDLDHTLLNSTLLLHLTP-EEDYLKSQADSLQDVSKGSL-----FMLAFMN------ 212
L++DLD T+++ + + + D ++L+DV +L L +MN
Sbjct: 176 ILVVDLDQTIIHCGVDPTIAEWKNDPNNPNFETLRDVKSFTLDEELVLPLMYMNDDGSML 235
Query: 213 ---------MMTKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARV 263
K+RP + F + + +FEM+IYTM R YAL++AK++DP+ E F R+
Sbjct: 236 RPPPVRKCWYYVKVRPGLKEFFAKVAPLFEMHIYTMATRAYALQIAKIVDPTGELFGDRI 295
Query: 264 ISRDDGTQRHQKGLDVVL-GQESAVLILDDTENAWTKHRDNLILMERYHFFAS 315
+SRD+ K L + +S V+++DD + W NLI + Y+FF
Sbjct: 296 LSRDENGSLTTKSLAKLFPTDQSMVVVIDDRGDVWN-WCPNLIKVVPYNFFVG 347
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 341 LASVLKVLKRIHNIFFDELAN-DLAGRDVRQVLKMVRGEVLKGCKLVFSHVFP--TKFPA 397
L ++ L IH ++D L+ + ++ +++ ++ +V + C VFS + P T
Sbjct: 464 LYYLMGTLSNIHKTYYDMLSQQNEPEPNLMEIIPSLKQKVFQNCYFVFSGLIPLGTDIQR 523
Query: 398 DTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAK--EAKFLVDPRWIETANF 455
+W GAT + ++D TH+++ + T K+R A K +V P WI
Sbjct: 524 SDIVIW--TSTFGATSTPDIDYLTTHLITKNPSTYKARLAKKFNPQIKIVHPDWIFECLV 581
Query: 456 LWQRQPEENF 465
W++ E+ +
Sbjct: 582 NWKKVDEKPY 591
>sp|Q7TSG2|CTDP1_MOUSE RNA polymerase II subunit A C-terminal domain phosphatase OS=Mus
musculus GN=Ctdp1 PE=1 SV=1
Length = 960
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 134/271 (49%), Gaps = 45/271 (16%)
Query: 65 RIKRRKTQIVETIQERPGPTLLGNLEEKTDMLYCAEVSLEMDNCPHPGSLGGMCYRCGK- 123
R++ + +V + +PG ++ + + ++ C HP + G+C CG+
Sbjct: 82 RLRSERAGVVRELCAQPG-----------QVVAPGALLVRLEGCSHPVVMKGLCAECGQD 130
Query: 124 --RLEEESG----------VTFSYICKGLRLGNDEIDRLRNTDMKHLLRHRKLYLILDLD 171
+L+ ++G V+ + L + +++ ++L D + L R+RKL L++DLD
Sbjct: 131 LTQLQSKNGRQQVPLSTATVSMVHSVPELMVSSEQAEKLGREDQQRLHRNRKLVLMVDLD 190
Query: 172 HTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSL-FMLAFMNMM--TKLRPFVHTFLKEA 228
TL+++T + Q +KG F L M T+LRP FL++
Sbjct: 191 QTLIHTT--------------EQHCPQMSNKGIFHFQLGRGEPMLHTRLRPHCKDFLEKI 236
Query: 229 SEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQRHQKG---LDVVLGQES 285
++++E++++T G R YA +A LDP ++ F+ R++SRD+ K ++ +S
Sbjct: 237 AKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDS 296
Query: 286 AVLILDDTENAWTKHRDNLILMERYHFFASS 316
V I+DD E+ W K NLI +++Y +F +
Sbjct: 297 MVCIIDDREDVW-KFAPNLITVKKYVYFPGT 326
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 346 KVLKRIHNIFFDELANDL-----AGRDVRQVLKMVRGEVLKGCKLVFSHVFPTKFPADTH 400
++L R+H ++ + L D+R+++ ++ +VL ++FS + PT FP +
Sbjct: 585 EILVRVHTDYYTKYDRYLNKELEEAPDIRKIVPELKSKVLADVAVIFSGLHPTNFPVEKT 644
Query: 401 YLWKMAEQLGATCSIELDPS------VTHVVSTDARTEKSRWAAKEAKFL--VDPRWIET 452
A LGA +L S TH+++ A TEK R A+E K L V P W+ +
Sbjct: 645 REHYHATALGAKVLTQLVLSPDAPDRATHLIAARAGTEKVRQ-AQECKHLHVVSPDWLWS 703
Query: 453 ANFLWQRQPEENFPV 467
W + E+ FP+
Sbjct: 704 CLERWDKVEEQLFPL 718
>sp|Q5XIK8|CTSL2_RAT CTD small phosphatase-like protein 2 OS=Rattus norvegicus
GN=Ctdspl2 PE=2 SV=1
Length = 465
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 23/151 (15%)
Query: 166 LILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQD--VSKGSLFMLAFMNMMTKLRPFVHT 223
L+LDLD TL++ +L + L+D ++ LF + +LRPF
Sbjct: 289 LVLDLDETLVHCSL---------------NELEDAALTFPVLFQDVIYQVYVRLRPFFRE 333
Query: 224 FLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRD----DGTQRHQKGLDV 279
FL+ S+M+E+ ++T + YA ++ +LDP ++ R+ G + K L++
Sbjct: 334 FLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCVQGN--YIKDLNI 391
Query: 280 VLGQESAVLILDDTENAWTKHRDNLILMERY 310
+ S +I+D++ A+ N I +E +
Sbjct: 392 LGRDLSKTIIIDNSPQAFAYQLSNGIPIESW 422
>sp|Q05D32|CTSL2_HUMAN CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2
PE=1 SV=2
Length = 466
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 23/151 (15%)
Query: 166 LILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQD--VSKGSLFMLAFMNMMTKLRPFVHT 223
L+LDLD TL++ +L + L+D ++ LF + +LRPF
Sbjct: 290 LVLDLDETLVHCSL---------------NELEDAALTFPVLFQDVIYQVYVRLRPFFRE 334
Query: 224 FLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRD----DGTQRHQKGLDV 279
FL+ S+M+E+ ++T + YA ++ +LDP ++ R+ G + K L++
Sbjct: 335 FLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCVQGN--YIKDLNI 392
Query: 280 VLGQESAVLILDDTENAWTKHRDNLILMERY 310
+ S +I+D++ A+ N I +E +
Sbjct: 393 LGRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|Q8BG15|CTSL2_MOUSE CTD small phosphatase-like protein 2 OS=Mus musculus GN=Ctdspl2
PE=1 SV=1
Length = 465
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 23/151 (15%)
Query: 166 LILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQD--VSKGSLFMLAFMNMMTKLRPFVHT 223
L+LDLD TL++ +L + L+D ++ LF + +LRPF
Sbjct: 289 LVLDLDETLVHCSL---------------NELEDAALTFPVLFQDVIYQVYVRLRPFFRE 333
Query: 224 FLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRD----DGTQRHQKGLDV 279
FL+ S+M+E+ ++T + YA ++ +LDP ++ R+ G + K L++
Sbjct: 334 FLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCVQGN--YIKDLNI 391
Query: 280 VLGQESAVLILDDTENAWTKHRDNLILMERY 310
+ S +I+D++ A+ N I +E +
Sbjct: 392 LGRDLSKTIIIDNSPQAFAYQLSNGIPIESW 422
>sp|Q9N4V4|SCPL3_CAEEL CTD small phosphatase-like protein 3 OS=Caenorhabditis elegans
GN=scpl-3 PE=3 SV=1
Length = 287
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 25/152 (16%)
Query: 166 LILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMM----TKLRPFV 221
L+LDLD TL++ +L TP ++ +F + F N+ +LRP +
Sbjct: 67 LVLDLDETLVHCSL----TPLDN-------------ATMVFPVVFQNITYQVYVRLRPHL 109
Query: 222 HTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGT---QRHQKGLD 278
TFL ++ FE+ I+T + YA ++ +LDP + + R+ R+ + K L
Sbjct: 110 RTFLSRMAKTFEIIIFTASKKVYANKLCDILDPRKNHIRHRLF-REHCVCVFGNYVKDLT 168
Query: 279 VVLGQESAVLILDDTENAWTKHRDNLILMERY 310
++ S +ILD+ ++ DN I +E +
Sbjct: 169 ILGRDPSKTMILDNAVQSFAYQLDNGIPIESW 200
>sp|Q5F3Z7|CTSL2_CHICK CTD small phosphatase-like protein 2 OS=Gallus gallus GN=CTDSPL2
PE=2 SV=2
Length = 466
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 23/151 (15%)
Query: 166 LILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQD--VSKGSLFMLAFMNMMTKLRPFVHT 223
L+LDLD TL++ +L + L+D ++ LF + +LRPF
Sbjct: 290 LVLDLDETLVHCSL---------------NELEDAALTFPVLFQDVIYQVYVRLRPFFRE 334
Query: 224 FLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRD----DGTQRHQKGLDV 279
FL+ S+++E+ ++T + YA ++ +LDP ++ R+ G + K L++
Sbjct: 335 FLERMSQIYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCVQGN--YIKDLNI 392
Query: 280 VLGQESAVLILDDTENAWTKHRDNLILMERY 310
+ S +I+D++ A+ N I +E +
Sbjct: 393 LGRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|Q08BB5|CTL2A_DANRE CTD small phosphatase-like protein 2-A OS=Danio rerio GN=ctdspl2a
PE=2 SV=1
Length = 469
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 21/150 (14%)
Query: 166 LILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQD--VSKGSLFMLAFMNMMTKLRPFVHT 223
L+LDLD TL++ +L + L+D ++ LF + +LRPF
Sbjct: 293 LVLDLDETLVHCSL---------------NELEDAALTFPVLFQDVIYQVYVRLRPFFRE 337
Query: 224 FLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGT---QRHQKGLDVV 280
FL+ S+++E+ ++T + YA ++ +LDP ++ R+ R+ + K L+++
Sbjct: 338 FLERMSQIYEIILFTASKKVYADKLLNILDPKKQLVRHRLF-REHCVCVQGNYIKDLNIL 396
Query: 281 LGQESAVLILDDTENAWTKHRDNLILMERY 310
S +I+D++ A+ N I +E +
Sbjct: 397 GRDLSKTVIIDNSPQAFAYQLSNGIPIESW 426
>sp|Q801R4|CTL2A_XENLA CTD small phosphatase-like protein 2-A OS=Xenopus laevis
GN=ctdspl2-a PE=2 SV=1
Length = 466
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 166 LILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQD--VSKGSLFMLAFMNMMTKLRPFVHT 223
L+LDLD TL++ +L + L+D ++ LF + +LRPF
Sbjct: 290 LVLDLDETLVHCSL---------------NELEDAALTFPVLFQDVIYQVYVRLRPFFRE 334
Query: 224 FLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGT---QRHQKGLDVV 280
FL+ S+++E+ ++T + YA ++ +LDP + R+ R+ + K L+++
Sbjct: 335 FLERMSQIYEIILFTASKKVYADKLLNILDPKKRLVRHRLF-REHCVCVQGNYIKDLNIL 393
Query: 281 LGQESAVLILDDTENAWTKHRDNLILMERY 310
S +I+D++ A+ N I +E +
Sbjct: 394 GRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|Q3KQB6|CTL2B_XENLA CTD small phosphatase-like protein 2-B OS=Xenopus laevis
GN=ctdspl2-b PE=2 SV=1
Length = 466
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 166 LILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQD--VSKGSLFMLAFMNMMTKLRPFVHT 223
L+LDLD TL++ +L + L+D ++ LF + +LRPF
Sbjct: 290 LVLDLDETLVHCSL---------------NELEDAALTFPVLFQDVIYQVYVRLRPFFRE 334
Query: 224 FLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGT---QRHQKGLDVV 280
FL+ S+++E+ ++T + YA ++ +LDP + R+ R+ + K L+++
Sbjct: 335 FLERMSQIYEIILFTASKKVYADKLLNILDPKKRLVRHRLF-REHCVCVQGNYIKDLNIL 393
Query: 281 LGQESAVLILDDTENAWTKHRDNLILMERY 310
S +I+D++ A+ N I +E +
Sbjct: 394 GRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|Q66KM5|CTSL2_XENTR CTD small phosphatase-like protein 2 OS=Xenopus tropicalis
GN=ctdspl2 PE=2 SV=1
Length = 466
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 166 LILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQD--VSKGSLFMLAFMNMMTKLRPFVHT 223
L+LDLD TL++ +L + L+D ++ LF + +LRPF
Sbjct: 290 LVLDLDETLVHCSL---------------NELEDAALTFPVLFQDVIYQVYVRLRPFFRE 334
Query: 224 FLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGT---QRHQKGLDVV 280
FL+ S+++E+ ++T + YA ++ +LDP + R+ R+ + K L+++
Sbjct: 335 FLERMSQIYEIILFTASKKVYADKLLNILDPKKRLVRHRLF-REHCVCVQGNYIKDLNIL 393
Query: 281 LGQESAVLILDDTENAWTKHRDNLILMERY 310
S +I+D++ A+ N I +E +
Sbjct: 394 GRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|A4QNX6|CTL2B_DANRE CTD small phosphatase-like protein 2-B OS=Danio rerio GN=ctdspl2b
PE=2 SV=1
Length = 460
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 166 LILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQD--VSKGSLFMLAFMNMMTKLRPFVHT 223
L+LDLD TL++ +L + L D ++ LF + +LRPF
Sbjct: 284 LVLDLDETLVHCSL---------------NELDDAALTFPVLFQDVIYQVYVRLRPFFRE 328
Query: 224 FLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQR--HQKGLDVVL 281
FL+ S+++E+ ++T + YA ++ +LDP ++ R+ + + K L+++
Sbjct: 329 FLERMSQIYEIILFTASKKVYADKLLNILDPRKQLVRHRLFREHCVCVQGNYIKDLNILG 388
Query: 282 GQESAVLILDDTENAWTKHRDNLILMERY 310
S +I+D++ A+ N I +E +
Sbjct: 389 RDLSKTIIIDNSPQAFAYQLSNGIPIESW 417
>sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum
GN=ctdspl2 PE=3 SV=1
Length = 567
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 32/158 (20%)
Query: 163 KLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMN-----MMTKL 217
K+ L+LDLD TL++ S + + + L F N + K
Sbjct: 390 KISLVLDLDETLVHC------------------STEPLEQPHLTFPVFFNNTEYQVFAKK 431
Query: 218 RPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPS-----REYFNARVISRDDGTQR 272
RPF FL + S++FE+ I+T YA ++ ++DP+ R Y ++ V DG
Sbjct: 432 RPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNKIKYRLYRDSCVYV--DG--N 487
Query: 273 HQKGLDVVLGQESAVLILDDTENAWTKHRDNLILMERY 310
+ K L V+ V+I+D++ ++ DN I +E +
Sbjct: 488 YLKDLSVLGRDLKQVVIIDNSPQSFGFQVDNGIPIESW 525
>sp|Q1RMV9|CNEP1_BOVIN CTD nuclear envelope phosphatase 1 OS=Bos taurus GN=CTDNEP1 PE=2
SV=1
Length = 244
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 218 RPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--RHQK 275
RP V FL+ S+ +E+ ++T Y +A LD SR R + + + K
Sbjct: 111 RPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIK 170
Query: 276 GLDVVLGQESAVLILDDTENAWTKHRDNLILMERY 310
L VV S+++ILD++ A+ H DN I ++ +
Sbjct: 171 DLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 205
>sp|Q3B7T6|CNEP1_RAT CTD nuclear envelope phosphatase 1 OS=Rattus norvegicus GN=Ctdnep1
PE=2 SV=2
Length = 244
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 218 RPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--RHQK 275
RP V FL+ S+ +E+ ++T Y +A LD SR R + + + K
Sbjct: 111 RPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIK 170
Query: 276 GLDVVLGQESAVLILDDTENAWTKHRDNLILMERY 310
L VV S+++ILD++ A+ H DN I ++ +
Sbjct: 171 DLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 205
>sp|Q3TP92|CNEP1_MOUSE CTD nuclear envelope phosphatase 1 OS=Mus musculus GN=Ctdnep1 PE=2
SV=2
Length = 244
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 218 RPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--RHQK 275
RP V FL+ S+ +E+ ++T Y +A LD SR R + + + K
Sbjct: 111 RPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIK 170
Query: 276 GLDVVLGQESAVLILDDTENAWTKHRDNLILMERY 310
L VV S+++ILD++ A+ H DN I ++ +
Sbjct: 171 DLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 205
>sp|O95476|CNEP1_HUMAN CTD nuclear envelope phosphatase 1 OS=Homo sapiens GN=CTDNEP1 PE=1
SV=2
Length = 244
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 218 RPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--RHQK 275
RP V FL+ S+ +E+ ++T Y +A LD SR R + + + K
Sbjct: 111 RPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQHCTLELGSYIK 170
Query: 276 GLDVVLGQESAVLILDDTENAWTKHRDNLILMERY 310
L VV S+++ILD++ A+ H DN I ++ +
Sbjct: 171 DLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 205
>sp|Q5U3T3|CNEPB_DANRE CTD nuclear envelope phosphatase 1B OS=Danio rerio GN=ctdnep1b PE=2
SV=1
Length = 245
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 25/156 (16%)
Query: 166 LILDLDHTLLNS-------TLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLR 218
L+LDLD TL++S + TP + LK D + R
Sbjct: 65 LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHP------------VRFFVHKR 112
Query: 219 PFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISR----DDGTQRHQ 274
P V FL+ S+ +E+ ++T Y +A LD ++ R + D G+ +
Sbjct: 113 PHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNKAILKRRYYRQHCTLDSGS--YI 170
Query: 275 KGLDVVLGQESAVLILDDTENAWTKHRDNLILMERY 310
K L VV S+V+ILD++ A+ H DN I ++ +
Sbjct: 171 KDLSVVHDDLSSVVILDNSPGAYRSHPDNAIPIKSW 206
>sp|Q5U395|CNEPA_DANRE CTD nuclear envelope phosphatase 1A OS=Danio rerio GN=ctdnep1a PE=2
SV=1
Length = 245
Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 218 RPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISR----DDGTQRH 273
RP V FL+ S+ +E+ ++T Y +A LD +R R + D G+ +
Sbjct: 112 RPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRGILKRRYYRQHCTLDLGS--Y 169
Query: 274 QKGLDVVLGQESAVLILDDTENAWTKHRDNLILMERY 310
K L VV S+++ILD++ A+ H DN I ++ +
Sbjct: 170 IKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 206
>sp|Q28HW9|CNEP1_XENTR CTD nuclear envelope phosphatase 1 OS=Xenopus tropicalis GN=ctdnep1
PE=2 SV=1
Length = 244
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 166 LILDLDHTLLNS-------TLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLR 218
L+LDLD TL++S + TP + LK D + R
Sbjct: 64 LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHP------------VRFFVHKR 111
Query: 219 PFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--RHQKG 276
P V FL+ S+ +E+ ++T Y +A LD +R R + + + K
Sbjct: 112 PHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRGVLRRRFYRQHCTLELGSYIKD 171
Query: 277 LDVVLGQESAVLILDDTENAWTKHRDNLILMERY 310
L VV S+V+ILD++ A+ H DN I ++ +
Sbjct: 172 LSVVHSDLSSVVILDNSPGAYRSHPDNAIPIKSW 205
>sp|Q5YDB6|CPL1_ARATH RNA polymerase II C-terminal domain phosphatase-like 1
OS=Arabidopsis thaliana GN=CPL1 PE=1 SV=1
Length = 967
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 207 MLAFMNMMTKLRPF---VHTFL-KEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFN-- 260
M+ +++ ++RP + ++L + + FE+Y+ TM +R YALEM +LLDP N
Sbjct: 265 MIRDTSVLVRMRPSWEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEGNLINTN 324
Query: 261 ---ARVISRDDGTQRHQKGLDVVLG---QESAVLILDDTENAW 297
AR++ G ++ +V L L++DD W
Sbjct: 325 DLLARIVCVKSGFKKSL--FNVFLDGTCHPKMALVIDDRLKVW 365
>sp|Q9PTJ6|CTDSL_CHICK CTD small phosphatase-like protein OS=Gallus gallus GN=NFI1 PE=2
SV=2
Length = 275
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 161 HRKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVS-KGSLFMLAFMNMMTKLRP 219
+ K +++DLD TL++S+ P S AD + V G++ + + RP
Sbjct: 103 YGKKCVVIDLDETLVHSSF----KP-----ISNADFIVPVEIDGTIHQVYVLK-----RP 148
Query: 220 FVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQRHQKGLDV 279
V FL+ E+FE ++T YA +A LLD F AR+ R D+
Sbjct: 149 HVDEFLQRMGELFECVLFTASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYVKDL 207
Query: 280 V-LGQE-SAVLILDDTENAWTKHRDNLILMERY 310
LG+E S V+I+D++ ++ H +N + ++ +
Sbjct: 208 SRLGRELSKVIIVDNSPASYIFHPENAVPVQSW 240
>sp|P58465|CTDSL_MOUSE CTD small phosphatase-like protein OS=Mus musculus GN=Ctdspl PE=2
SV=3
Length = 276
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 158 LLRHRKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVS-KGSLFMLAFMNMMTK 216
+L + K +++DLD TL++S+ S AD + V G++ + +
Sbjct: 101 VLDYGKKCVVIDLDETLVHSSF---------KPISNADFIVPVEIDGTIHQVYVLK---- 147
Query: 217 LRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQRHQKG 276
RP V FL+ ++FE ++T YA +A LLD F AR+ R
Sbjct: 148 -RPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYV 205
Query: 277 LDVV-LGQE-SAVLILDDTENAWTKHRDNLILMERY 310
D+ LG+E S V+I+D++ ++ H +N + ++ +
Sbjct: 206 KDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSW 241
>sp|O15194|CTDSL_HUMAN CTD small phosphatase-like protein OS=Homo sapiens GN=CTDSPL PE=1
SV=2
Length = 276
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 158 LLRHRKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVS-KGSLFMLAFMNMMTK 216
+L + K +++DLD TL++S+ P S AD + V G++ + +
Sbjct: 101 VLDYGKKCVVIDLDETLVHSSF----KP-----ISNADFIVPVEIDGTIHQVYVLK---- 147
Query: 217 LRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQRHQKG 276
RP V FL+ ++FE ++T YA +A LLD F AR+ R
Sbjct: 148 -RPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYV 205
Query: 277 LDVV-LGQE-SAVLILDDTENAWTKHRDNLILMERY 310
D+ LG+E S V+I+D++ ++ H +N + ++ +
Sbjct: 206 KDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSW 241
>sp|P58466|CTDS1_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Mus musculus GN=Ctdsp1 PE=1 SV=1
Length = 261
Score = 39.7 bits (91), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 163 KLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVH 222
K+ +++DLD TL++S+ P + AD + V + ++ RP V
Sbjct: 90 KICVVIDLDETLVHSSF----KP-----VNNADFIIPVEIDGVVHQVYVLK----RPHVD 136
Query: 223 TFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQRHQKGLDVV-L 281
FL+ E+FE ++T YA +A LLD F AR+ R D+ L
Sbjct: 137 EFLQRMGELFECVLFTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRL 195
Query: 282 GQE-SAVLILDDTENAWTKHRDNLI 305
G++ VLILD++ ++ H DN +
Sbjct: 196 GRDLRRVLILDNSPASYVFHPDNAV 220
>sp|Q9GZU7|CTDS1_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Homo sapiens GN=CTDSP1 PE=1 SV=1
Length = 261
Score = 39.7 bits (91), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 163 KLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVH 222
K+ +++DLD TL++S+ P + AD + V + ++ RP V
Sbjct: 90 KICVVIDLDETLVHSSF----KPVNN-----ADFIIPVEIDGVVHQVYVLK----RPHVD 136
Query: 223 TFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQRHQKGLDVV-L 281
FL+ E+FE ++T YA +A LLD F AR+ R D+ L
Sbjct: 137 EFLQRMGELFECVLFTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRL 195
Query: 282 GQE-SAVLILDDTENAWTKHRDNLI 305
G++ VLILD++ ++ H DN +
Sbjct: 196 GRDLRRVLILDNSPASYVFHPDNAV 220
>sp|Q8JIL9|CNEP1_XENLA CTD nuclear envelope phosphatase 1 OS=Xenopus laevis GN=ctdnep1
PE=1 SV=1
Length = 244
Score = 39.7 bits (91), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 166 LILDLDHTLLNS-------TLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLR 218
L+LDLD TL++S + TP + LK D + R
Sbjct: 64 LVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHP------------VRFFVHKR 111
Query: 219 PFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--RHQKG 276
P V FL+ S+ +E+ ++T Y +A LD ++ R + + + K
Sbjct: 112 PHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNKGVLRRRFYRQHCTLELGSYIKD 171
Query: 277 LDVVLGQESAVLILDDTENAWTKHRDNLILMERY 310
L VV S+V+ILD++ A+ H DN I ++ +
Sbjct: 172 LSVVHSDLSSVVILDNSPGAYRSHPDNAIPIKSW 205
>sp|O59718|NEM1_SCHPO Nuclear envelope morphology protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nem1 PE=3 SV=1
Length = 476
Score = 39.3 bits (90), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 166 LILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFL 225
L+LDLD TL++S + ++ G +L +++ RP + FL
Sbjct: 306 LVLDLDETLIHSV-------SRGSRTTSGQPIEVHVPGEHPILYYIHK----RPHLDYFL 354
Query: 226 KEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGT--QRHQKGLDVVLGQ 283
S+ F + ++T +PYA + L+ ++ F R + K + +
Sbjct: 355 SNVSQWFRLILFTASVQPYADPIIDYLERDKKIFAKRYYRQHCALVDSSFVKDISICNIH 414
Query: 284 ESAVLILDDTENAWTKHRDNLILME 308
S ++I+D++ ++ H++N I +E
Sbjct: 415 LSRIMIIDNSPASYNAHKENAIPIE 439
>sp|Q5YDB5|CPL2_ARATH RNA polymerase II C-terminal domain phosphatase-like 2
OS=Arabidopsis thaliana GN=CPL2 PE=1 SV=3
Length = 770
Score = 39.3 bits (90), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 212 NMMTKLRPF---VHTFLKEAS-EMFEMYIYTMGDRPYALEMAKLLDPS------REYFNA 261
+++ KLRP + ++L + + FE+Y+ TM +R YALEM +LLDP +E +
Sbjct: 253 SVLVKLRPAWEELRSYLTAKTRKRFEVYVCTMAERDYALEMWRLLDPEAHLISLKELRDR 312
Query: 262 RVISRDDGTQRHQKGLDVVLGQESAVLILDDTENAW 297
V + D + + + +++DD W
Sbjct: 313 IVCVKPDAKKSLLSVFNGGICHPKMAMVIDDRMKVW 348
>sp|Q09695|YA22_SCHPO Uncharacterized protein C2F7.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2F7.02c PE=1 SV=1
Length = 325
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 166 LILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFL 225
LILDLD TL++S+ ++ P + + + D LQ ++ RP V FL
Sbjct: 160 LILDLDETLVHSSFK-YIEPADFVVSIEIDGLQH------------DVRVVKRPGVDEFL 206
Query: 226 KEASEMFEMYIYTMGDRPYALEMAKLLD 253
K+ +MFE+ ++T YA + +LD
Sbjct: 207 KKMGDMFEIVVFTASLAKYADPVLDMLD 234
>sp|Q9V9P3|TI50A_DROME Mitochondrial import inner membrane translocase subunit TIM50-A
OS=Drosophila melanogaster GN=ttm3 PE=2 SV=1
Length = 343
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 216 KLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVI--SRDDGTQRH 273
K RP V FL++ S FE+ IYT A + LDP Y R++ + D +H
Sbjct: 164 KKRPGVDYFLQQCSRNFEIVIYTSEQGMTAFPLLDALDPY-GYIKYRLVRGATDLVEGQH 222
Query: 274 QKGLDVVLGQESAVLILDDTENAWTKHRDNLILMERY 310
K LD + S V+++D H DN +++ ++
Sbjct: 223 TKNLDYLNRDLSRVIVVDCDPYTTPLHPDNSLVLTKW 259
>sp|Q9W4V8|TI50C_DROME Mitochondrial import inner membrane translocase subunit TIM50-C
OS=Drosophila melanogaster GN=ttm50 PE=2 SV=2
Length = 428
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 216 KLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRD-----DGT 270
K RP V FL E ++ FE+ ++T + LDP+ Y R++ RD DG
Sbjct: 253 KKRPGVDHFLAECAKDFEIVVFTAEQGMTVFPILDALDPN-GYIMYRLV-RDATHFVDG- 309
Query: 271 QRHQKGLDVVLGQESAVLILDDTENAWTKHRDNLILMERYH 311
H K LD + V+++D NA H DN + R+H
Sbjct: 310 -HHVKNLDNLNRDLKKVIVVDWDANATKMHPDNTFGLARWH 349
>sp|Q6CM45|TIM50_KLULA Mitochondrial import inner membrane translocase subunit TIM50
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TIM50
PE=3 SV=1
Length = 480
Score = 36.2 bits (82), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISR----DDGT 270
T RP V FL S+ +E+ +++ YA ++A+ LDP + + DG
Sbjct: 218 TAKRPGVDYFLGYLSQYYEIVLFSSNYMMYAEKIAEKLDPIHAFITYNLFKEHCLYKDGV 277
Query: 271 QRHQKGLDVVLGQESAVLILDDTENAWTKHRDNLILMERY 310
H K L + VLI+D EN++ +N I +E +
Sbjct: 278 --HIKDLSKLNRDLGKVLIIDTDENSFKLQPENAIYLEPW 315
>sp|Q9W0S3|TI50B_DROME Mitochondrial import inner membrane translocase subunit TIM50-B
OS=Drosophila melanogaster GN=ttm2 PE=2 SV=1
Length = 409
Score = 35.8 bits (81), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 216 KLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSR--EYFNARVISRDDGTQRH 273
K RP V FLKE ++ FE+ +YT + LDP+ Y R + DG H
Sbjct: 234 KKRPGVDVFLKECAKYFEIVVYTAEQGVTVFPLVDALDPNGCIMYRLVRDSTHFDGGH-H 292
Query: 274 QKGLDVVLGQESAVLILDDTENAWTKHRDNLILMERY 310
K LD + V+++D N+ H N + R+
Sbjct: 293 VKNLDNLNRDLKRVVVVDWDRNSTKFHPSNSFSIPRW 329
>sp|P38757|NEM1_YEAST Nuclear envelope morphology protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NEM1 PE=1 SV=1
Length = 446
Score = 35.8 bits (81), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 80/172 (46%), Gaps = 37/172 (21%)
Query: 161 HRKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAF-MNMMTKL-- 217
+K L++DLD TL++S S++ + + S+G L + F ++ + L
Sbjct: 249 QKKKKLVIDLDETLIHSA-------------SRSTTHSNSSQGHLVEVKFGLSGIRTLYF 295
Query: 218 ---RPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDP------SREYFNARVISRDD 268
RP+ FL + S+ +++ I+T + YA + L+ S+ Y+ + + RD
Sbjct: 296 IHKRPYCDLFLTKVSKWYDLIIFTASMKEYADPVIDWLESSFPSSFSKRYYRSDCVLRDG 355
Query: 269 GTQRHQKGLDVV-------LGQESA---VLILDDTENAWTKHRDNLILMERY 310
+ K L +V G S+ V+I+D++ ++ + DN I +E +
Sbjct: 356 VG--YIKDLSIVKDSEENGKGSSSSLDDVIIIDNSPVSYAMNVDNAIQVEGW 405
>sp|Q20432|CNEP1_CAEEL CTD nuclear envelope phosphatase 1 homolog OS=Caenorhabditis
elegans GN=scpl-2 PE=3 SV=1
Length = 246
Score = 35.8 bits (81), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 64/164 (39%), Gaps = 18/164 (10%)
Query: 152 NTDMKHLLRHRKL-----YLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLF 206
N M L HR L L+LDLD TL++S H +K S D + +
Sbjct: 41 NIPMSPLTTHRLLTVKRKILVLDLDETLIHSH---HDGVLRQTVKPGTPS--DFTIRVVI 95
Query: 207 MLAFMNMMTKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPS-----REYFNA 261
+ RP V FL S+ +E+ ++T Y +A LD R YF
Sbjct: 96 DRHPVKFSVHERPHVDYFLSVVSQWYELVVFTASMEVYGTSVADRLDRGRGILKRRYFRQ 155
Query: 262 RVISRDDGTQRHQKGLDVVLGQESAVLILDDTENAWTKHRDNLI 305
G + K L + S++ ILD++ A+ K N I
Sbjct: 156 HCTMEVGG---YTKDLSAIHPDLSSICILDNSPGAYRKFPHNAI 196
>sp|Q9XYL0|CTDS_DICDI Probable C-terminal domain small phosphatase OS=Dictyostelium
discoideum GN=fcpA PE=3 SV=1
Length = 306
Score = 35.4 bits (80), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 160 RHRKL-YLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLR 218
RH L L+LDLD TL++S+ P D++ +G++ + + R
Sbjct: 132 RHVGLKTLVLDLDETLVHSSFKPVHNP--DFIVPVE------IEGTIHQVYVVK-----R 178
Query: 219 PFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQRHQKGLD 278
PFV FL+ +E FE+ ++T YA + LD R + R+ + D
Sbjct: 179 PFVDDFLRAIAEKFEIVVFTASLAKYADPVLDFLDTGR-VIHYRLFRESCHNHKGNYVKD 237
Query: 279 VV-LGQE-SAVLILDDTENAWTKHRDNLILMERY 310
+ LG++ + +I+D++ +++ H +N I ++ +
Sbjct: 238 LSRLGRDLKSTIIVDNSPSSYLFHPENAIPIDSW 271
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 181,026,887
Number of Sequences: 539616
Number of extensions: 7781040
Number of successful extensions: 64859
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 304
Number of HSP's that attempted gapping in prelim test: 51259
Number of HSP's gapped (non-prelim): 9907
length of query: 484
length of database: 191,569,459
effective HSP length: 121
effective length of query: 363
effective length of database: 126,275,923
effective search space: 45838160049
effective search space used: 45838160049
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)