Query 041302
Match_columns 484
No_of_seqs 334 out of 1494
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 09:28:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041302.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041302hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ef1_A RNA polymerase II subun 100.0 4.2E-72 1.4E-76 587.9 29.7 324 138-467 1-441 (442)
2 3ef0_A RNA polymerase II subun 100.0 8.9E-68 3E-72 547.8 28.5 314 148-467 3-371 (372)
3 3qle_A TIM50P; chaperone, mito 100.0 5.2E-35 1.8E-39 279.6 12.2 157 160-377 31-190 (204)
4 2ght_A Carboxy-terminal domain 100.0 5.7E-32 1.9E-36 253.6 12.6 167 160-374 12-181 (181)
5 3shq_A UBLCP1; phosphatase, hy 100.0 3E-30 1E-34 262.2 7.9 157 160-374 137-309 (320)
6 2hhl_A CTD small phosphatase-l 100.0 3.5E-29 1.2E-33 237.7 12.4 157 160-353 25-184 (195)
7 3l3e_A DNA topoisomerase 2-bin 99.8 3.2E-20 1.1E-24 159.3 10.0 94 374-471 10-106 (107)
8 2d8m_A DNA-repair protein XRCC 99.8 2.4E-19 8.1E-24 159.2 8.7 95 375-473 18-112 (129)
9 3pa6_A Microcephalin; BRCT dom 99.8 4.7E-19 1.6E-23 152.7 10.3 99 374-472 2-100 (107)
10 2cou_A ECT2 protein; BRCT doma 99.8 9.5E-20 3.2E-24 157.3 3.8 95 373-471 6-100 (109)
11 3l46_A Protein ECT2; alternati 99.8 9.7E-20 3.3E-24 158.2 3.6 99 369-471 11-109 (112)
12 4id3_A DNA repair protein REV1 99.7 9.7E-18 3.3E-22 138.9 8.0 87 376-468 4-92 (92)
13 2ebw_A DNA repair protein REV1 99.7 1.2E-16 4.1E-21 134.2 7.5 87 376-468 9-96 (97)
14 3olc_X DNA topoisomerase 2-bin 99.6 4.3E-16 1.5E-20 156.7 8.8 97 372-472 192-289 (298)
15 1wf6_A Similar to S.pombe -RAD 99.6 8.1E-16 2.8E-20 136.9 9.2 100 367-471 28-130 (132)
16 3pc6_A DNA repair protein XRCC 99.6 3.3E-15 1.1E-19 127.9 9.3 88 378-468 6-95 (104)
17 1l0b_A BRCA1; TANDEM-BRCT, thr 99.5 1.1E-14 3.6E-19 139.9 7.5 91 376-470 1-97 (229)
18 2nte_A BARD-1, BRCA1-associate 99.5 3E-14 1E-18 135.5 6.9 86 381-470 1-89 (210)
19 3sqd_A PAX-interacting protein 99.5 2E-14 6.9E-19 138.4 5.7 93 375-472 9-102 (219)
20 2etx_A Mediator of DNA damage 99.5 5.7E-14 2E-18 133.9 6.9 89 375-471 5-94 (209)
21 1t15_A Breast cancer type 1 su 99.5 8.4E-14 2.9E-18 131.8 7.8 85 381-469 3-93 (214)
22 3al2_A DNA topoisomerase 2-bin 99.4 1.1E-12 3.9E-17 127.5 8.8 89 378-470 5-96 (235)
23 2jw5_A DNA polymerase lambda; 99.3 1.6E-12 5.6E-17 111.6 7.7 93 374-469 6-105 (106)
24 3olc_X DNA topoisomerase 2-bin 99.3 1.3E-12 4.5E-17 131.3 8.0 85 377-465 103-187 (298)
25 3u3z_A Microcephalin; DNA repa 99.3 3.7E-12 1.3E-16 120.8 8.5 87 382-472 11-99 (199)
26 3l41_A BRCT-containing protein 99.3 9.5E-13 3.3E-17 126.9 4.5 87 378-472 4-91 (220)
27 3ii6_X DNA ligase 4; XRCC4, NH 99.2 5.5E-12 1.9E-16 124.5 5.9 93 375-467 160-263 (263)
28 3ii6_X DNA ligase 4; XRCC4, NH 99.2 1.9E-11 6.4E-16 120.7 8.4 94 372-470 3-98 (263)
29 1kzy_C Tumor suppressor P53-bi 99.2 3.4E-11 1.2E-15 118.6 8.8 94 376-469 12-137 (259)
30 1l7b_A DNA ligase; BRCT, autos 99.1 6.2E-11 2.1E-15 99.2 6.6 76 377-456 5-80 (92)
31 2vxb_A DNA repair protein RHP9 99.1 1.2E-10 4.1E-15 113.6 8.8 91 378-469 1-118 (241)
32 2k6g_A Replication factor C su 99.1 2.6E-10 8.8E-15 98.4 8.9 82 373-457 26-108 (109)
33 2ebu_A Replication factor C su 99.0 4.9E-10 1.7E-14 97.0 7.9 82 372-456 15-97 (112)
34 1z56_C DNA ligase IV; DNA repa 99.0 1.2E-10 4.2E-15 114.2 2.8 91 375-468 156-262 (264)
35 2ep8_A Pescadillo homolog 1; A 99.0 4.8E-10 1.7E-14 95.2 6.0 81 376-466 9-100 (100)
36 2cok_A Poly [ADP-ribose] polym 98.9 1.8E-09 6.1E-14 93.6 8.5 85 377-465 8-105 (113)
37 1z56_C DNA ligase IV; DNA repa 98.9 5E-10 1.7E-14 109.9 3.0 93 376-469 2-102 (264)
38 2coe_A Deoxynucleotidyltransfe 98.9 7.1E-09 2.4E-13 90.7 9.1 91 377-470 18-117 (120)
39 3pc7_A DNA ligase 3; DNA repai 98.8 4.5E-09 1.6E-13 87.0 4.9 75 375-462 12-87 (88)
40 1l0b_A BRCA1; TANDEM-BRCT, thr 98.7 1.4E-08 4.7E-13 97.1 6.6 93 376-471 114-216 (229)
41 1t15_A Breast cancer type 1 su 98.7 1.6E-08 5.4E-13 95.4 5.8 92 375-469 111-212 (214)
42 3u3z_A Microcephalin; DNA repa 98.5 8.1E-08 2.8E-12 90.8 5.2 83 375-468 115-198 (199)
43 2dun_A POL MU, DNA polymerase 98.5 2.6E-07 8.9E-12 81.7 6.9 87 378-467 9-106 (133)
44 2etx_A Mediator of DNA damage 98.4 8.6E-07 2.9E-11 84.1 8.5 92 376-472 112-206 (209)
45 1kzy_C Tumor suppressor P53-bi 98.3 1.2E-06 4.1E-11 86.1 8.1 88 376-466 152-250 (259)
46 2nte_A BARD-1, BRCA1-associate 98.2 7.7E-07 2.6E-11 84.2 4.4 86 375-463 100-209 (210)
47 2wm8_A MDP-1, magnesium-depend 97.9 2.1E-05 7.3E-10 71.9 7.1 140 138-297 9-150 (187)
48 2owo_A DNA ligase; protein-DNA 97.9 2E-06 7E-11 94.7 0.0 74 378-454 596-669 (671)
49 1dgs_A DNA ligase; AMP complex 97.8 2.1E-06 7.2E-11 94.5 0.0 75 378-456 586-660 (667)
50 2fpr_A Histidine biosynthesis 97.8 5.6E-05 1.9E-09 68.9 8.4 109 159-295 10-144 (176)
51 3sqd_A PAX-interacting protein 97.7 0.0001 3.5E-09 70.5 9.0 87 376-467 119-218 (219)
52 3ib6_A Uncharacterized protein 97.6 6.7E-05 2.3E-09 68.7 6.2 82 215-298 33-130 (189)
53 2pr7_A Haloacid dehalogenase/e 97.6 1.8E-05 6.1E-10 67.3 2.0 79 217-297 19-104 (137)
54 3m9l_A Hydrolase, haloacid deh 97.6 5E-05 1.7E-09 69.3 4.7 84 213-297 67-157 (205)
55 2vxb_A DNA repair protein RHP9 97.6 8.6E-05 2.9E-09 72.1 6.3 83 375-461 147-240 (241)
56 3l8h_A Putative haloacid dehal 97.5 0.00019 6.3E-09 64.5 8.0 102 164-295 2-129 (179)
57 3t7k_A RTT107, regulator of TY 97.4 0.00041 1.4E-08 67.4 9.1 105 366-473 6-124 (256)
58 2gmw_A D,D-heptose 1,7-bisphos 97.4 0.00019 6.6E-09 67.0 6.7 105 160-295 22-159 (211)
59 3kzx_A HAD-superfamily hydrola 97.4 0.00031 1.1E-08 64.9 7.4 80 214-295 101-188 (231)
60 2p9j_A Hypothetical protein AQ 97.3 0.00028 9.6E-09 62.5 6.2 102 163-297 9-113 (162)
61 3al2_A DNA topoisomerase 2-bin 97.3 0.00019 6.4E-09 69.5 5.1 88 377-469 133-230 (235)
62 3m1y_A Phosphoserine phosphata 97.2 0.00023 8E-09 64.9 5.0 81 215-297 74-171 (217)
63 3zvl_A Bifunctional polynucleo 97.2 0.00033 1.1E-08 72.9 5.7 106 161-294 56-184 (416)
64 4gns_A Chitin biosynthesis pro 96.9 0.0016 5.6E-08 59.8 7.3 102 369-471 151-257 (290)
65 3nvb_A Uncharacterized protein 96.8 0.00083 2.8E-08 69.6 4.9 132 144-297 204-341 (387)
66 3huf_A DNA repair and telomere 96.8 0.0012 4.2E-08 66.3 5.9 56 399-455 126-186 (325)
67 2oda_A Hypothetical protein ps 96.7 0.00096 3.3E-08 61.9 4.2 74 215-295 35-116 (196)
68 2o2x_A Hypothetical protein; s 96.7 0.002 7E-08 60.0 5.9 103 162-295 30-165 (218)
69 4eze_A Haloacid dehalogenase-l 96.7 0.0014 4.8E-08 65.7 5.1 80 215-295 178-273 (317)
70 2b0c_A Putative phosphatase; a 96.4 0.00022 7.5E-09 64.5 -2.5 82 214-297 89-178 (206)
71 1k1e_A Deoxy-D-mannose-octulos 96.3 0.0045 1.5E-07 56.1 5.5 101 163-296 8-111 (180)
72 3e8m_A Acylneuraminate cytidyl 96.1 0.00095 3.2E-08 59.1 0.2 115 163-308 4-119 (164)
73 2i33_A Acid phosphatase; HAD s 96.0 0.0079 2.7E-07 58.6 6.1 121 160-295 56-183 (258)
74 3p96_A Phosphoserine phosphata 96.0 0.0036 1.2E-07 64.5 3.6 80 215-295 255-350 (415)
75 2i7d_A 5'(3')-deoxyribonucleot 95.8 0.0033 1.1E-07 57.3 2.3 40 215-254 72-113 (193)
76 3kbb_A Phosphorylated carbohyd 95.8 0.0092 3.1E-07 54.4 5.2 82 214-297 82-170 (216)
77 3skx_A Copper-exporting P-type 95.7 0.015 5.1E-07 55.0 6.4 72 216-295 144-216 (280)
78 3mmz_A Putative HAD family hyd 95.5 0.01 3.5E-07 53.7 4.2 69 217-295 42-113 (176)
79 2r8e_A 3-deoxy-D-manno-octulos 95.5 0.02 6.9E-07 52.2 6.2 78 223-307 60-140 (188)
80 3mn1_A Probable YRBI family ph 95.4 0.016 5.5E-07 53.0 5.2 100 163-295 19-121 (189)
81 3n07_A 3-deoxy-D-manno-octulos 95.4 0.0034 1.1E-07 58.5 0.6 76 225-307 61-139 (195)
82 3n1u_A Hydrolase, HAD superfam 95.3 0.0044 1.5E-07 57.1 1.4 66 224-296 54-122 (191)
83 2pib_A Phosphorylated carbohyd 95.3 0.017 5.8E-07 51.6 5.2 79 215-295 83-168 (216)
84 1rku_A Homoserine kinase; phos 95.3 0.013 4.4E-07 53.1 4.4 81 214-295 67-156 (206)
85 2b82_A APHA, class B acid phos 95.3 0.0032 1.1E-07 59.1 0.2 38 216-253 88-126 (211)
86 2hdo_A Phosphoglycolate phosph 95.2 0.026 8.7E-07 51.0 5.9 80 215-296 82-167 (209)
87 3e58_A Putative beta-phosphogl 95.1 0.029 1E-06 49.9 6.1 80 215-296 88-174 (214)
88 2l42_A DNA-binding protein RAP 95.1 0.03 1E-06 46.8 5.5 88 377-472 9-99 (106)
89 3qbz_A DDK kinase regulatory s 95.1 0.032 1.1E-06 50.4 6.1 72 377-448 56-144 (160)
90 2gfh_A Haloacid dehalogenase-l 95.1 0.018 6.1E-07 55.1 4.8 82 215-298 120-209 (260)
91 2nyv_A Pgpase, PGP, phosphogly 95.1 0.028 9.7E-07 51.8 6.0 80 214-295 81-167 (222)
92 3umb_A Dehalogenase-like hydro 95.1 0.034 1.2E-06 50.7 6.4 79 215-295 98-183 (233)
93 3sd7_A Putative phosphatase; s 95.0 0.026 8.8E-07 52.1 5.4 80 215-296 109-196 (240)
94 2hsz_A Novel predicted phospha 94.8 0.057 1.9E-06 50.5 7.2 79 215-295 113-198 (243)
95 3qnm_A Haloacid dehalogenase-l 94.7 0.036 1.2E-06 50.4 5.6 78 215-294 106-189 (240)
96 2ah5_A COG0546: predicted phos 94.7 0.042 1.4E-06 50.2 6.0 80 215-296 83-166 (210)
97 3oq0_A DBF4, protein DNA52; DD 94.7 0.022 7.6E-07 51.1 3.8 80 377-456 18-114 (151)
98 2obb_A Hypothetical protein; s 94.6 0.1 3.5E-06 46.5 8.0 97 163-295 3-100 (142)
99 3s6j_A Hydrolase, haloacid deh 94.5 0.044 1.5E-06 49.7 5.8 81 215-297 90-177 (233)
100 3pct_A Class C acid phosphatas 94.5 0.1 3.4E-06 51.1 8.5 113 161-295 56-184 (260)
101 3ed5_A YFNB; APC60080, bacillu 94.5 0.044 1.5E-06 49.9 5.6 82 215-298 102-192 (238)
102 3um9_A Haloacid dehalogenase, 94.5 0.042 1.4E-06 49.9 5.4 79 215-295 95-180 (230)
103 2hoq_A Putative HAD-hydrolase 94.5 0.032 1.1E-06 51.7 4.7 82 215-298 93-183 (241)
104 2hi0_A Putative phosphoglycola 94.4 0.045 1.5E-06 51.0 5.7 79 214-295 108-193 (240)
105 1zrn_A L-2-haloacid dehalogena 94.4 0.047 1.6E-06 50.0 5.6 79 215-295 94-179 (232)
106 3mc1_A Predicted phosphatase, 94.2 0.036 1.2E-06 50.3 4.4 81 215-297 85-172 (226)
107 4ex6_A ALNB; modified rossman 94.1 0.052 1.8E-06 49.7 5.3 79 215-295 103-188 (237)
108 2no4_A (S)-2-haloacid dehaloge 94.1 0.054 1.8E-06 50.0 5.5 79 215-295 104-189 (240)
109 3ij5_A 3-deoxy-D-manno-octulos 94.1 0.053 1.8E-06 50.9 5.3 113 163-308 49-164 (211)
110 3ocu_A Lipoprotein E; hydrolas 94.0 0.043 1.5E-06 53.8 4.7 116 160-297 55-186 (262)
111 2i6x_A Hydrolase, haloacid deh 93.9 0.038 1.3E-06 49.8 3.8 82 214-297 87-180 (211)
112 2hcf_A Hydrolase, haloacid deh 93.7 0.089 3E-06 47.8 6.0 82 214-297 91-183 (234)
113 4eek_A Beta-phosphoglucomutase 93.7 0.045 1.6E-06 51.2 4.1 83 214-297 108-198 (259)
114 4dcc_A Putative haloacid dehal 93.6 0.045 1.5E-06 50.4 3.8 79 216-295 112-201 (229)
115 1yns_A E-1 enzyme; hydrolase f 93.5 0.078 2.7E-06 50.8 5.5 79 215-295 129-215 (261)
116 2fea_A 2-hydroxy-3-keto-5-meth 93.5 0.081 2.8E-06 49.3 5.5 89 215-308 76-187 (236)
117 3l41_A BRCT-containing protein 93.5 0.075 2.6E-06 50.6 5.2 89 375-465 109-212 (220)
118 2w43_A Hypothetical 2-haloalka 93.4 0.051 1.7E-06 48.8 3.7 77 215-296 73-155 (201)
119 3a1c_A Probable copper-exporti 93.4 0.21 7.2E-06 48.3 8.4 73 215-295 162-235 (287)
120 3u26_A PF00702 domain protein; 93.4 0.049 1.7E-06 49.6 3.6 82 215-298 99-188 (234)
121 1qq5_A Protein (L-2-haloacid d 93.3 0.08 2.8E-06 49.5 5.1 78 215-295 92-175 (253)
122 3oq4_A DBF4, protein DNA52; DD 93.3 0.13 4.3E-06 45.3 5.9 75 382-456 7-97 (134)
123 3ddh_A Putative haloacid dehal 93.2 0.062 2.1E-06 48.4 4.0 79 214-294 103-184 (234)
124 1qyi_A ZR25, hypothetical prot 93.0 0.06 2E-06 55.5 3.9 53 215-268 214-268 (384)
125 2zg6_A Putative uncharacterize 92.8 0.095 3.2E-06 48.0 4.8 76 214-295 93-175 (220)
126 3cnh_A Hydrolase family protei 92.4 0.083 2.8E-06 47.2 3.7 81 215-297 85-171 (200)
127 2pke_A Haloacid delahogenase-l 92.4 0.082 2.8E-06 49.2 3.7 78 215-294 111-189 (251)
128 3iru_A Phoshonoacetaldehyde hy 92.2 0.12 4.1E-06 48.2 4.7 80 215-295 110-197 (277)
129 1nnl_A L-3-phosphoserine phosp 92.1 0.15 5.2E-06 46.5 5.1 49 215-263 85-135 (225)
130 3smv_A S-(-)-azetidine-2-carbo 92.0 0.14 4.9E-06 46.3 4.8 80 215-298 98-188 (240)
131 3dv9_A Beta-phosphoglucomutase 91.8 0.11 3.6E-06 47.7 3.7 79 215-295 107-193 (247)
132 3nuq_A Protein SSM1, putative 91.8 0.23 8E-06 47.1 6.3 79 215-295 141-233 (282)
133 3qxg_A Inorganic pyrophosphata 91.8 0.11 3.8E-06 48.0 3.8 79 215-295 108-194 (243)
134 3k1z_A Haloacid dehalogenase-l 91.7 0.12 4.2E-06 48.8 4.0 81 215-298 105-194 (263)
135 2go7_A Hydrolase, haloacid deh 91.6 0.32 1.1E-05 42.6 6.5 80 214-296 83-169 (207)
136 3umc_A Haloacid dehalogenase; 91.5 0.12 4.1E-06 47.6 3.8 77 215-295 119-201 (254)
137 3nas_A Beta-PGM, beta-phosphog 91.3 0.17 5.9E-06 46.0 4.6 75 217-295 93-174 (233)
138 1te2_A Putative phosphatase; s 91.1 0.49 1.7E-05 42.2 7.3 80 215-296 93-179 (226)
139 3fvv_A Uncharacterized protein 90.8 0.43 1.5E-05 43.5 6.8 48 216-264 92-140 (232)
140 3kd3_A Phosphoserine phosphohy 90.6 0.41 1.4E-05 42.5 6.3 80 216-295 82-175 (219)
141 2om6_A Probable phosphoserine 90.6 0.22 7.6E-06 44.9 4.5 76 217-294 100-185 (235)
142 2p11_A Hypothetical protein; p 90.4 0.17 5.8E-06 46.7 3.6 78 215-295 95-172 (231)
143 3umg_A Haloacid dehalogenase; 90.1 0.12 4.1E-06 47.4 2.3 77 215-295 115-197 (254)
144 3d6j_A Putative haloacid dehal 89.7 0.43 1.5E-05 42.5 5.7 79 215-295 88-173 (225)
145 1ltq_A Polynucleotide kinase; 89.2 0.084 2.9E-06 51.3 0.5 111 163-298 159-284 (301)
146 2fi1_A Hydrolase, haloacid deh 88.6 0.68 2.3E-05 40.5 6.0 76 217-297 83-165 (190)
147 2qlt_A (DL)-glycerol-3-phospha 88.3 0.55 1.9E-05 44.6 5.6 80 215-297 113-207 (275)
148 3l5k_A Protein GS1, haloacid d 88.1 0.24 8.2E-06 45.8 2.8 81 215-297 111-203 (250)
149 3bwv_A Putative 5'(3')-deoxyri 87.9 0.96 3.3E-05 40.0 6.6 79 215-308 68-152 (180)
150 2fdr_A Conserved hypothetical 87.9 0.3 1E-05 44.0 3.3 80 215-297 86-173 (229)
151 4g9b_A Beta-PGM, beta-phosphog 87.2 0.51 1.7E-05 44.1 4.5 78 216-297 95-179 (243)
152 1xpj_A Hypothetical protein; s 87.1 0.51 1.8E-05 40.2 4.1 62 165-256 3-77 (126)
153 3i28_A Epoxide hydrolase 2; ar 87.0 0.38 1.3E-05 49.1 3.8 77 215-295 99-188 (555)
154 1l6r_A Hypothetical protein TA 86.5 0.65 2.2E-05 43.4 4.8 57 164-256 6-63 (227)
155 1swv_A Phosphonoacetaldehyde h 86.4 0.45 1.5E-05 44.3 3.7 80 215-295 102-189 (267)
156 3kc2_A Uncharacterized protein 86.1 1.1 3.9E-05 45.3 6.7 55 162-253 12-71 (352)
157 4gib_A Beta-phosphoglucomutase 85.8 0.47 1.6E-05 44.5 3.5 79 215-297 115-200 (250)
158 2g80_A Protein UTR4; YEL038W, 85.8 0.22 7.6E-06 47.8 1.2 79 215-297 124-217 (253)
159 2yj3_A Copper-transporting ATP 85.0 0.19 6.4E-06 48.3 0.0 75 214-295 134-209 (263)
160 3vay_A HAD-superfamily hydrola 84.5 0.35 1.2E-05 43.7 1.8 77 215-298 104-188 (230)
161 1wr8_A Phosphoglycolate phosph 84.4 1.6 5.4E-05 40.4 6.4 57 164-256 4-61 (231)
162 2wf7_A Beta-PGM, beta-phosphog 83.5 1.1 3.7E-05 39.9 4.7 77 215-295 90-173 (221)
163 1q92_A 5(3)-deoxyribonucleotid 82.4 0.11 3.7E-06 47.3 -2.6 45 215-259 74-120 (197)
164 1xvi_A MPGP, YEDP, putative ma 81.0 2.2 7.5E-05 40.8 6.1 57 163-255 9-66 (275)
165 4ap9_A Phosphoserine phosphata 81.0 0.69 2.4E-05 40.6 2.3 76 215-295 78-161 (201)
166 3epr_A Hydrolase, haloacid deh 80.8 1.7 5.9E-05 40.9 5.2 47 396-450 182-229 (264)
167 3pgv_A Haloacid dehalogenase-l 80.2 2.2 7.4E-05 40.7 5.7 20 160-179 18-37 (285)
168 3mpo_A Predicted hydrolase of 80.1 2.5 8.6E-05 39.8 6.1 57 163-255 5-62 (279)
169 3qgm_A P-nitrophenyl phosphata 79.9 1.9 6.6E-05 40.3 5.2 46 396-449 187-233 (268)
170 4dw8_A Haloacid dehalogenase-l 79.4 2.9 9.8E-05 39.4 6.2 56 163-254 5-61 (279)
171 1nrw_A Hypothetical protein, h 79.3 3 0.0001 39.9 6.4 56 164-255 5-61 (288)
172 3dnp_A Stress response protein 79.1 2.9 9.8E-05 39.6 6.2 57 163-255 6-63 (290)
173 3n28_A Phosphoserine phosphata 78.9 1.6 5.3E-05 43.0 4.3 80 215-295 177-272 (335)
174 2pq0_A Hypothetical conserved 78.7 2.6 8.8E-05 39.3 5.6 16 164-179 4-19 (258)
175 1nf2_A Phosphatase; structural 78.6 3.2 0.00011 39.2 6.4 57 164-256 3-59 (268)
176 3ewi_A N-acylneuraminate cytid 77.6 1.3 4.5E-05 39.8 3.1 99 162-295 8-110 (168)
177 1rkq_A Hypothetical protein YI 77.3 3 0.0001 39.8 5.7 15 164-178 6-20 (282)
178 1vjr_A 4-nitrophenylphosphatas 77.0 2.8 9.7E-05 39.1 5.4 46 396-449 195-241 (271)
179 1zjj_A Hypothetical protein PH 76.5 2.9 9.9E-05 39.3 5.3 14 164-177 2-15 (263)
180 2fue_A PMM 1, PMMH-22, phospho 76.1 3.1 0.00011 39.4 5.4 17 162-178 12-28 (262)
181 3dao_A Putative phosphatse; st 75.8 3.3 0.00011 39.4 5.6 20 160-179 18-37 (283)
182 2oyc_A PLP phosphatase, pyrido 74.8 3.7 0.00013 39.6 5.7 47 396-449 215-261 (306)
183 2hx1_A Predicted sugar phospha 74.2 3.8 0.00013 38.8 5.5 51 396-449 204-254 (284)
184 3pdw_A Uncharacterized hydrola 73.5 1.9 6.7E-05 40.3 3.2 50 396-453 183-233 (266)
185 2ho4_A Haloacid dehalogenase-l 73.3 4 0.00014 37.5 5.3 47 396-449 179-225 (259)
186 1s2o_A SPP, sucrose-phosphatas 73.1 2.5 8.6E-05 39.6 3.9 15 164-178 4-18 (244)
187 1l7m_A Phosphoserine phosphata 73.1 4.3 0.00015 35.6 5.3 48 215-263 75-123 (211)
188 1l7m_A Phosphoserine phosphata 72.8 1.3 4.4E-05 39.0 1.7 17 162-178 4-20 (211)
189 2amy_A PMM 2, phosphomannomuta 71.8 5.5 0.00019 37.0 5.9 17 162-178 5-21 (246)
190 4ap9_A Phosphoserine phosphata 69.6 1.5 5.2E-05 38.2 1.4 16 163-178 9-24 (201)
191 2x4d_A HLHPP, phospholysine ph 68.7 6.2 0.00021 36.1 5.5 15 164-178 13-27 (271)
192 2b30_A Pvivax hypothetical pro 68.6 6.1 0.00021 38.3 5.6 15 163-177 27-41 (301)
193 1yv9_A Hydrolase, haloacid deh 67.6 5.2 0.00018 37.2 4.7 47 396-449 183-229 (264)
194 1q92_A 5(3)-deoxyribonucleotid 67.4 1.7 5.9E-05 39.1 1.3 18 162-179 3-20 (197)
195 2zos_A MPGP, mannosyl-3-phosph 67.3 5.2 0.00018 37.4 4.7 35 221-255 22-57 (249)
196 2rbk_A Putative uncharacterize 67.1 1.6 5.4E-05 41.1 1.0 16 164-179 3-18 (261)
197 3f9r_A Phosphomannomutase; try 65.7 8.2 0.00028 36.4 5.7 17 163-179 4-20 (246)
198 1rlm_A Phosphatase; HAD family 64.0 4.9 0.00017 38.0 3.8 16 164-179 4-19 (271)
199 3d6j_A Putative haloacid dehal 62.5 2.9 0.0001 36.9 1.8 17 163-179 6-22 (225)
200 3bwv_A Putative 5'(3')-deoxyri 62.4 2.3 8E-05 37.5 1.1 17 163-179 4-20 (180)
201 4gxt_A A conserved functionall 60.8 6.5 0.00022 40.2 4.3 51 214-264 219-275 (385)
202 2fi1_A Hydrolase, haloacid deh 59.8 2.9 0.0001 36.3 1.3 48 396-453 137-184 (190)
203 3gyg_A NTD biosynthesis operon 59.7 3.1 0.00011 39.6 1.5 17 162-178 21-37 (289)
204 1u02_A Trehalose-6-phosphate p 59.7 6 0.00021 36.9 3.5 35 218-252 25-59 (239)
205 2hcf_A Hydrolase, haloacid deh 59.6 3.4 0.00012 37.0 1.7 17 163-179 4-20 (234)
206 2go7_A Hydrolase, haloacid deh 59.4 3.3 0.00011 35.8 1.6 16 164-179 5-20 (207)
207 2ah5_A COG0546: predicted phos 58.8 3.7 0.00013 36.9 1.8 47 396-450 137-183 (210)
208 3zx4_A MPGP, mannosyl-3-phosph 58.0 3.2 0.00011 38.9 1.3 15 164-178 1-15 (259)
209 2hdo_A Phosphoglycolate phosph 58.0 3.6 0.00012 36.4 1.6 47 396-450 138-184 (209)
210 3fzq_A Putative hydrolase; YP_ 57.8 3.3 0.00011 38.6 1.4 17 163-179 5-21 (274)
211 2p11_A Hypothetical protein; p 57.7 3.4 0.00011 37.8 1.3 17 163-179 11-27 (231)
212 2w43_A Hypothetical 2-haloalka 57.3 3.8 0.00013 36.2 1.6 15 165-179 3-17 (201)
213 2i6x_A Hydrolase, haloacid deh 57.2 3.9 0.00013 36.2 1.7 16 164-179 6-21 (211)
214 3e58_A Putative beta-phosphogl 57.0 3.5 0.00012 36.0 1.3 45 396-448 145-189 (214)
215 2fdr_A Conserved hypothetical 56.5 3.9 0.00013 36.4 1.6 16 164-179 5-20 (229)
216 1te2_A Putative phosphatase; s 56.1 3.7 0.00013 36.3 1.3 17 163-179 9-25 (226)
217 2c4n_A Protein NAGD; nucleotid 56.0 3.8 0.00013 36.8 1.4 46 396-449 176-222 (250)
218 3s6j_A Hydrolase, haloacid deh 55.8 4.5 0.00015 36.1 1.8 17 163-179 6-22 (233)
219 2wf7_A Beta-PGM, beta-phosphog 55.6 3.2 0.00011 36.7 0.8 16 164-179 3-18 (221)
220 3cnh_A Hydrolase family protei 55.4 4.2 0.00014 35.7 1.5 49 396-452 141-189 (200)
221 3mc1_A Predicted phosphatase, 55.2 3.9 0.00013 36.5 1.3 17 163-179 4-20 (226)
222 2pke_A Haloacid delahogenase-l 55.1 3.9 0.00013 37.6 1.3 16 164-179 14-29 (251)
223 3kd3_A Phosphoserine phosphohy 55.0 4.2 0.00014 35.7 1.5 16 163-178 4-19 (219)
224 4ex6_A ALNB; modified rossman 54.8 4.4 0.00015 36.5 1.6 19 161-179 17-35 (237)
225 1zrn_A L-2-haloacid dehalogena 54.4 4.3 0.00015 36.5 1.4 16 164-179 5-20 (232)
226 3ddh_A Putative haloacid dehal 54.3 4.5 0.00015 35.8 1.6 16 164-179 9-24 (234)
227 2hsz_A Novel predicted phospha 54.3 4.8 0.00017 37.1 1.8 16 164-179 24-39 (243)
228 2hi0_A Putative phosphoglycola 54.0 4.5 0.00015 37.0 1.6 46 396-449 165-210 (240)
229 3fvv_A Uncharacterized protein 53.8 4.3 0.00015 36.6 1.4 17 163-179 4-20 (232)
230 3ed5_A YFNB; APC60080, bacillu 53.7 4.2 0.00014 36.4 1.3 46 396-448 158-204 (238)
231 2pib_A Phosphorylated carbohyd 53.7 4.4 0.00015 35.4 1.4 16 164-179 2-17 (216)
232 3um9_A Haloacid dehalogenase, 53.6 4.6 0.00016 36.0 1.5 46 396-449 152-197 (230)
233 3dv9_A Beta-phosphoglucomutase 53.5 4.7 0.00016 36.4 1.5 18 162-179 22-39 (247)
234 2om6_A Probable phosphoserine 53.5 3.9 0.00013 36.4 1.0 16 164-179 5-20 (235)
235 3nas_A Beta-PGM, beta-phosphog 53.1 4.2 0.00014 36.5 1.2 47 396-450 146-192 (233)
236 2zg6_A Putative uncharacterize 53.1 5.4 0.00019 36.0 1.9 16 164-179 4-19 (220)
237 3kbb_A Phosphorylated carbohyd 52.5 4.5 0.00016 36.1 1.3 15 165-179 3-17 (216)
238 4gib_A Beta-phosphoglucomutase 52.0 4.6 0.00016 37.5 1.3 43 396-446 170-212 (250)
239 3vay_A HAD-superfamily hydrola 51.3 4.8 0.00016 36.0 1.2 16 164-179 3-18 (230)
240 3umc_A Haloacid dehalogenase; 51.3 5.2 0.00018 36.3 1.5 45 396-448 173-217 (254)
241 2hoq_A Putative HAD-hydrolase 51.1 4.5 0.00016 36.8 1.1 16 164-179 3-18 (241)
242 3umb_A Dehalogenase-like hydro 50.9 5.9 0.0002 35.4 1.8 16 163-178 4-19 (233)
243 3smv_A S-(-)-azetidine-2-carbo 50.8 4.6 0.00016 36.0 1.0 17 163-179 6-22 (240)
244 2no4_A (S)-2-haloacid dehaloge 50.6 5.3 0.00018 36.3 1.4 16 163-178 14-29 (240)
245 1swv_A Phosphonoacetaldehyde h 50.5 5.1 0.00018 36.9 1.3 16 164-179 7-22 (267)
246 3sd7_A Putative phosphatase; s 50.5 6.1 0.00021 35.8 1.8 17 163-179 29-45 (240)
247 3l5k_A Protein GS1, haloacid d 50.4 5.1 0.00018 36.6 1.3 48 396-449 171-218 (250)
248 2qlt_A (DL)-glycerol-3-phospha 50.2 5.5 0.00019 37.5 1.5 16 164-179 36-51 (275)
249 1nnl_A L-3-phosphoserine phosp 50.1 4.9 0.00017 36.2 1.1 16 164-179 15-30 (225)
250 3t7k_A RTT107, regulator of TY 50.1 34 0.0012 33.1 7.0 82 373-458 129-240 (256)
251 4fe3_A Cytosolic 5'-nucleotida 49.9 9.6 0.00033 36.6 3.3 41 214-254 139-180 (297)
252 3iru_A Phoshonoacetaldehyde hy 49.8 5.4 0.00019 36.6 1.4 16 163-178 14-29 (277)
253 3umg_A Haloacid dehalogenase; 49.6 4.9 0.00017 36.2 1.0 45 396-448 169-213 (254)
254 4eek_A Beta-phosphoglucomutase 49.5 6.3 0.00022 36.2 1.8 18 162-179 27-44 (259)
255 3u26_A PF00702 domain protein; 49.5 5.1 0.00017 35.8 1.1 15 164-178 3-17 (234)
256 3qxg_A Inorganic pyrophosphata 49.1 6.2 0.00021 35.9 1.6 17 163-179 24-40 (243)
257 3l7y_A Putative uncharacterize 49.1 5.2 0.00018 38.4 1.2 17 163-179 37-53 (304)
258 3qnm_A Haloacid dehalogenase-l 49.0 5.6 0.00019 35.5 1.3 17 163-179 5-21 (240)
259 2gfh_A Haloacid dehalogenase-l 48.9 5.6 0.00019 37.3 1.3 47 396-449 176-223 (260)
260 2nyv_A Pgpase, PGP, phosphogly 48.3 6.3 0.00022 35.6 1.6 16 164-179 4-19 (222)
261 3nuq_A Protein SSM1, putative 48.1 6 0.00021 37.1 1.4 17 162-178 56-72 (282)
262 3r4c_A Hydrolase, haloacid deh 47.2 6.1 0.00021 36.8 1.3 15 163-177 12-26 (268)
263 4dcc_A Putative haloacid dehal 46.2 7.5 0.00026 35.1 1.7 46 396-449 173-218 (229)
264 1qq5_A Protein (L-2-haloacid d 45.1 6.6 0.00023 36.1 1.2 46 396-449 147-192 (253)
265 4g9b_A Beta-PGM, beta-phosphog 44.7 7.1 0.00024 36.1 1.3 46 396-449 149-194 (243)
266 1y8a_A Hypothetical protein AF 44.4 7.7 0.00026 38.0 1.6 22 156-177 14-35 (332)
267 3k1z_A Haloacid dehalogenase-l 42.9 8.9 0.0003 35.7 1.7 16 164-179 2-17 (263)
268 2fea_A 2-hydroxy-3-keto-5-meth 41.8 8.9 0.0003 35.1 1.5 15 163-177 6-20 (236)
269 1rku_A Homoserine kinase; phos 38.0 10 0.00035 33.4 1.2 13 164-176 3-15 (206)
270 1yns_A E-1 enzyme; hydrolase f 36.0 11 0.00036 35.7 1.0 47 395-449 186-232 (261)
271 2g80_A Protein UTR4; YEL038W, 35.9 11 0.00038 35.7 1.1 46 396-449 187-232 (253)
272 2jc9_A Cytosolic purine 5'-nuc 32.1 39 0.0013 36.3 4.7 43 211-253 241-284 (555)
273 4as2_A Phosphorylcholine phosp 29.3 43 0.0015 33.3 4.2 51 216-267 143-200 (327)
274 3ipz_A Monothiol glutaredoxin- 28.9 43 0.0015 27.2 3.5 42 218-259 4-50 (109)
275 3a1c_A Probable copper-exporti 28.7 19 0.00066 34.2 1.5 16 164-179 33-48 (287)
No 1
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.2e-72 Score=587.95 Aligned_cols=324 Identities=31% Similarity=0.482 Sum_probs=277.3
Q ss_pred CCcccCHHHHHHHHhhhhhhhhhcCccEEEEcCCCceeeeccCCCCChhhh--hhh-ccccccccccccceeeee-----
Q 041302 138 KGLRLGNDEIDRLRNTDMKHLLRHRKLYLILDLDHTLLNSTLLLHLTPEED--YLK-SQADSLQDVSKGSLFMLA----- 209 (484)
Q Consensus 138 ~~l~vs~~ea~~~~~~~~~~ll~~rKL~LVLDLDeTLIhs~~~~~~~~~e~--~~~-~~~~~~~d~~~~~~f~l~----- 209 (484)
.||+||.+||.+++++..+||+..+||+||||||||||||+..+ ...+| ++. .++.+++|+. .|.++
T Consensus 1 ~~l~vs~~~a~~~~~~~~~rll~~~Kl~LVLDLDeTLiHs~~~~--~~~~~~~~~~~~~~~~~~dv~---~F~l~~~~~~ 75 (442)
T 3ef1_A 1 SDLTVSLEEASRLESENVKRLRQEKRLSLIVXLDQTIIHATVDP--TVGEWMSDPGNVNYDVLRDVR---SFNLQEGPSG 75 (442)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHTTCEEEEECCBTTTEEEECCT--HHHHHHTCTTSTTTGGGTTCE---EEEEEETTTT
T ss_pred CCceecHHHHHHHHHHHHHHHHhcCCeEEEEeeccceecccccc--ccchhccCCCCcchhhhcccc---ceeeeeccCC
Confidence 48999999999999999999999999999999999999999854 22332 111 1233444542 35553
Q ss_pred -ceeEEEEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCCccccccccC-CCCCcE
Q 041302 210 -FMNMMTKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQRHQKGLDVVL-GQESAV 287 (484)
Q Consensus 210 -~~~~~vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~~~KdL~~l~-~~~~~v 287 (484)
+++|||++|||+++||++|+++|||+|||+|++.||++|++.|||.+.||++|||||++|+..++|||++|+ +++++|
T Consensus 76 ~~~~~~V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~~~~KdL~~ll~rdl~~v 155 (442)
T 3ef1_A 76 YTSCYYIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSLAQKSLRRLFPCDTSMV 155 (442)
T ss_dssp EEEEEEEEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSSCSSCCCGGGTCSSCCTTE
T ss_pred ceeEEEEEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCCCceeeehHHhcCCCcceE
Confidence 478999999999999999999999999999999999999999999999999999999999877999999874 699999
Q ss_pred EEEcCChhhhhcCCCCeEEecccccccccccc--------------cCC-c--c--cc------------cc--------
Q 041302 288 LILDDTENAWTKHRDNLILMERYHFFASSCRQ--------------FGY-H--C--QS------------LS-------- 328 (484)
Q Consensus 288 VIIDD~~~vw~~~~~NlI~I~py~fF~~~~~~--------------~g~-~--~--~s------------l~-------- 328 (484)
|||||++.+|..|+ |+|+|.||+||.+.++. ++. + . +. ..
T Consensus 156 vIIDd~p~~~~~~p-N~I~I~~~~fF~~~gD~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (442)
T 3ef1_A 156 VVIDDRGDVWDWNP-NLIKVVPYEFFVGIGDINSNFLAKSTPLPEQEQLIPLEIPKDEPDSVDEINEENEETPEYDSSNS 234 (442)
T ss_dssp EEEESCSGGGTTCT-TEEECCCCCCSTTCCCSCC----------------------------------------------
T ss_pred EEEECCHHHhCCCC-CEEEcCCccccCCCCcccccccccccccccccccccccccccccccccccccccccCcccccccc
Confidence 99999999999886 99999999999986431 121 0 0 00 00
Q ss_pred ---------------------------cc-------------------cc-----c----------chhhHHHHHHHHHH
Q 041302 329 ---------------------------QL-------------------RS-----D----------ESELEGALASVLKV 347 (484)
Q Consensus 329 ---------------------------e~-------------------~~-----d----------e~~~D~~L~~l~~~ 347 (484)
++ +| | ..++|++|.+|.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~rpl~~~q~~l~~~~~~~~~~~~~l~d~D~~L~~l~~~ 314 (442)
T 3ef1_A 235 SYAQDSSTIPEKTLLKDTFLQNREALEEQNKERVTALELQKSERPLAKQQNALLEDEGKPTPSHTLLHNRDHELERLEKV 314 (442)
T ss_dssp ------------------------CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTSCCSCHHHHCSCCCCCCHHHHHHHH
T ss_pred cccccccccchhhhhccccCccchhhHHHHHHhhhhhhhhhccCchhhHHHHhhhhhhccccccccccCCcHHHHHHHHH
Confidence 00 00 0 01358999999999
Q ss_pred HHHHHHHHHhhhhhhc------cCchhHHHHhhhhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCc
Q 041302 348 LKRIHNIFFDELANDL------AGRDVRQVLKMVRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSV 421 (484)
Q Consensus 348 L~~IH~~ff~~~~~~~------~~~DVr~IL~~lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~v 421 (484)
|.+||++||+.|+... ..+||+.||+++|+++|+||+|||||++|.+.+++++.++.+|+++||+|+.+++++|
T Consensus 315 L~~iH~~fy~~~d~~~~~~~~~~~~Dv~~il~~~k~~~L~G~~IvfSG~~p~~~~~~r~~l~~~~~~lGa~~~~~vs~~v 394 (442)
T 3ef1_A 315 LKDIHAVYYEEENDISSRSGNHKHANVGLIIPKMKQKVLKGCRLLFSGVIPLGVDVLSSDIAKWAMSFGAEVVLDFSVPP 394 (442)
T ss_dssp HHHHHHHHHHHHHTCCSCCSSSCCCCHHHHHHHHHHTTSTTCEEEEESSSCTTSCSTTSHHHHHHHTTTCEECSSSSSCC
T ss_pred HHHHHHHHHHHhhhcccccccCCCCcHHHHHHHHhhcccCCcEEEEecccCCCCCccHHHHHHHHHHcCCEEeCCCCCCc
Confidence 9999999999998632 3589999999999999999999999999998878889999999999999999999999
Q ss_pred cEEEEcCCCChHHHHHHhc-CCeeeChhhHHHHHHhcCCCCCCCCCC
Q 041302 422 THVVSTDARTEKSRWAAKE-AKFLVDPRWIETANFLWQRQPEENFPV 467 (484)
Q Consensus 422 THlVa~~~~T~K~~~A~~~-gi~IV~~~WL~~c~~~w~r~dE~~Y~l 467 (484)
|||||++.+|.|+++|.++ ||+||+++||++|+.+|+|+||.+|+|
T Consensus 395 THLVa~~~~t~K~~~A~~~g~IkIVs~~WL~dcl~~~krldE~~YlL 441 (442)
T 3ef1_A 395 THLIAAKIRTEKVKKAVSMGNIKVVKLNWLTESLSQWKRLPESDYLL 441 (442)
T ss_dssp SEEEECSCCCHHHHHHHHHSSSEEEEHHHHHHHHHHTSCCCGGGTBC
T ss_pred eEEEeCCCCCHHHHHHHhcCCCEEEeHHHHHHHHHcCCcCChhcccc
Confidence 9999999999999999998 599999999999999999999999987
No 2
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.9e-68 Score=547.79 Aligned_cols=314 Identities=32% Similarity=0.508 Sum_probs=266.3
Q ss_pred HHHHhhhhhhhhhcCccEEEEcCCCceeeeccCCCCChhhhh--hh-ccccccccccccceeeee------ceeEEEEec
Q 041302 148 DRLRNTDMKHLLRHRKLYLILDLDHTLLNSTLLLHLTPEEDY--LK-SQADSLQDVSKGSLFMLA------FMNMMTKLR 218 (484)
Q Consensus 148 ~~~~~~~~~~ll~~rKL~LVLDLDeTLIhs~~~~~~~~~e~~--~~-~~~~~~~d~~~~~~f~l~------~~~~~vklR 218 (484)
+++++++++||+..+|++||||||||||||+..+ ..++|. .. .+....+|+. .|.++ ..++||++|
T Consensus 3 ~~~~~~~~~rl~~~~k~~LVlDLD~TLvhS~~~~--~~~~w~~~~~~~~~~~~~dv~---~f~~~~~~~~~~~~~~v~~R 77 (372)
T 3ef0_A 3 SRLESENVKRLRQEKRLSLIVDLDQTIIHATVDP--TVGEWMSDPGNVNYDVLRDVR---SFNLQEGPSGYTSCYYIKFR 77 (372)
T ss_dssp -CHHHHHHHHHHHHTCEEEEECCBTTTEEEECCT--HHHHHHTCTTSTTTGGGTTCE---EEEEEETTTTEEEEEEEEEC
T ss_pred hhhhhHHHHHHHhCCCCEEEEcCCCCcccccCcC--ccchhhccCCCCchhhhhhhh---ceeeeeccCCceEEEEEEEC
Confidence 5788999999999999999999999999998743 223332 10 1112233332 24442 478999999
Q ss_pred ccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCCcccccccc-CCCCCcEEEEcCChhhh
Q 041302 219 PFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQRHQKGLDVV-LGQESAVLILDDTENAW 297 (484)
Q Consensus 219 Pgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~~~KdL~~l-~~~~~~vVIIDD~~~vw 297 (484)
||+++||+.++++|||+|||++++.||++|++.|||.+.||++||+||++|+..++|||++| .+++++||||||++.+|
T Consensus 78 Pg~~eFL~~l~~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~~~~KdL~~L~~~dl~~viiiDd~~~~~ 157 (372)
T 3ef0_A 78 PGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSLAQKSLRRLFPCDTSMVVVIDDRGDVW 157 (372)
T ss_dssp TTHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSSCSSCCCGGGTCSSCCTTEEEEESCSGGG
T ss_pred cCHHHHHHHHhcCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCCCcceecHHHhcCCCCceEEEEeCCHHHc
Confidence 99999999999999999999999999999999999999999999999999988899999988 56899999999999999
Q ss_pred hcCCCCeEEecccccccccccccCC--cc--ccccc------------------------ccccc----------hhhHH
Q 041302 298 TKHRDNLILMERYHFFASSCRQFGY--HC--QSLSQ------------------------LRSDE----------SELEG 339 (484)
Q Consensus 298 ~~~~~NlI~I~py~fF~~~~~~~g~--~~--~sl~e------------------------~~~de----------~~~D~ 339 (484)
..|+ |+|+|.||+||++.++.+.. +. .++.+ +..|+ .++|+
T Consensus 158 ~~~p-N~I~i~~~~~f~~~~d~n~~~lp~~~~~~~~~~~~~~~~~~~q~~~~p~~~~q~~l~~~e~~~~~~~~~~~d~D~ 236 (372)
T 3ef0_A 158 DWNP-NLIKVVPYEFFVGIGDINSNFLSGNREALEEQNKERVTALELQKSERPLAKQQNALLEDEGKPTPSHTLLHNRDH 236 (372)
T ss_dssp TTCT-TEEECCCCCCSTTCCCTTC--------CCGGGGHHHHHHHHHHHHHCHHHHHHHHHHHSCCSCSGGGCSCCCCCC
T ss_pred CCCC-cEeeeCCccccCCcCccccccccccchhHHHhhhhhhhhhhhhhcccchhHHHHhhhccccccchhhccccCChH
Confidence 9886 99999999999987653221 00 01110 00011 24689
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhh------ccCchhHHHHhhhhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeE
Q 041302 340 ALASVLKVLKRIHNIFFDELAND------LAGRDVRQVLKMVRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATC 413 (484)
Q Consensus 340 ~L~~l~~~L~~IH~~ff~~~~~~------~~~~DVr~IL~~lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v 413 (484)
+|.+++++|++||++||+.++.. ...+||+.||+++|+++|+||+|||||++|.+.++++..++++++++||+|
T Consensus 237 ~L~~~~~~L~~iH~~Ff~~~~~~~~~~~~~~~~dv~~ii~~lk~~~L~G~~ivfSG~~~~~~~~~~~~l~~l~~~lGa~v 316 (372)
T 3ef0_A 237 ELERLEKVLKDIHAVYYEEENDISSRSGNHKHANVGLIIPKMKQKVLKGCRLLFSGVIPLGVDVLSSDIAKWAMSFGAEV 316 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHTTTSTTCEEEEESSSCTTSCTTTSHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHhhhcCCcEEEEecccCCCcchhHHHHHHHHHHcCCEE
Confidence 99999999999999999998753 245899999999999999999999999999887788899999999999999
Q ss_pred eeecCCCccEEEEcCCCChHHHHHHhc-CCeeeChhhHHHHHHhcCCCCCCCCCC
Q 041302 414 SIELDPSVTHVVSTDARTEKSRWAAKE-AKFLVDPRWIETANFLWQRQPEENFPV 467 (484)
Q Consensus 414 ~~~i~~~vTHlVa~~~~T~K~~~A~~~-gi~IV~~~WL~~c~~~w~r~dE~~Y~l 467 (484)
+.+++++||||||++.+|.|+++|+++ ||+||+|+||++|+.+|+++||++|+|
T Consensus 317 ~~~vs~~vTHLVa~~~~t~K~~~A~~~~~I~IV~~~Wl~~c~~~~~~vdE~~Y~l 371 (372)
T 3ef0_A 317 VLDFSVPPTHLIAAKIRTEKVKKAVSMGNIKVVKLNWLTESLSQWKRLPESDYLL 371 (372)
T ss_dssp ESSSSSCCSEEEECSCCCHHHHHHHHSSSCCEEEHHHHHHHHHTTSCCCGGGGBC
T ss_pred eCcCCCCceEEEEcCCCchHHHHHHhcCCCEEEcHHHHHHHHHhCCcCChhhcee
Confidence 999999999999999999999999998 799999999999999999999999987
No 3
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=100.00 E-value=5.2e-35 Score=279.64 Aligned_cols=157 Identities=24% Similarity=0.379 Sum_probs=138.1
Q ss_pred hcCccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhhCCeEEEecC
Q 041302 160 RHRKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASEMFEMYIYTM 239 (484)
Q Consensus 160 ~~rKL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~~yEl~IyT~ 239 (484)
.++|++||||||+||||+...+. ..+|+++|||+++||+.++++|||+|||+
T Consensus 31 ~~~~~tLVLDLDeTLvh~~~~~~----------------------------~~~~v~~RPgl~eFL~~l~~~yeivI~Ta 82 (204)
T 3qle_A 31 YQRPLTLVITLEDFLVHSEWSQK----------------------------HGWRTAKRPGADYFLGYLSQYYEIVLFSS 82 (204)
T ss_dssp -CCSEEEEEECBTTTEEEEEETT----------------------------TEEEEEECTTHHHHHHHHTTTEEEEEECS
T ss_pred cCCCeEEEEeccccEEeeecccc----------------------------CceeEEeCCCHHHHHHHHHhCCEEEEEcC
Confidence 36899999999999999987320 24789999999999999999999999999
Q ss_pred CcHhHHHHHHhhhCCCCcccceeEEeecCCCC---CccccccccCCCCCcEEEEcCChhhhhcCCCCeEEeccccccccc
Q 041302 240 GDRPYALEMAKLLDPSREYFNARVISRDDGTQ---RHQKGLDVVLGQESAVLILDDTENAWTKHRDNLILMERYHFFASS 316 (484)
Q Consensus 240 g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~---~~~KdL~~l~~~~~~vVIIDD~~~vw~~~~~NlI~I~py~fF~~~ 316 (484)
|++.||++|++.|||.+.+|++|++ |++|.. .++|||++++.++++||||||++.+|..|++|+|+|.||.
T Consensus 83 s~~~ya~~vl~~LDp~~~~f~~rl~-R~~c~~~~g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~~~~----- 156 (204)
T 3qle_A 83 NYMMYSDKIAEKLDPIHAFVSYNLF-KEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEPWN----- 156 (204)
T ss_dssp SCHHHHHHHHHHTSTTCSSEEEEEC-GGGSEEETTEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECCCCC-----
T ss_pred CcHHHHHHHHHHhCCCCCeEEEEEE-ecceeEECCeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEeeeEC-----
Confidence 9999999999999999889988765 999963 5799999999999999999999999999999999999997
Q ss_pred ccccCCcccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhccCchhHHHHhhhhc
Q 041302 317 CRQFGYHCQSLSQLRSDESELEGALASVLKVLKRIHNIFFDELANDLAGRDVRQVLKMVRG 377 (484)
Q Consensus 317 ~~~~g~~~~sl~e~~~de~~~D~~L~~l~~~L~~IH~~ff~~~~~~~~~~DVr~IL~~lr~ 377 (484)
| +.|.+|..|+++|+.|+. ....|||.+|...+.
T Consensus 157 ----~--------------~~D~eL~~L~~~L~~L~~---------~~~~DVR~~L~~~~~ 190 (204)
T 3qle_A 157 ----G--------------EADDKLVRLIPFLEYLAT---------QQTKDVRPILNSFED 190 (204)
T ss_dssp ----S--------------SCCCHHHHHHHHHHHHHH---------TCCSCSHHHHTTSSC
T ss_pred ----C--------------CCChhHHHHHHHHHHHhh---------cChHHHHHHHHHhcC
Confidence 2 235689999999999973 135799999998764
No 4
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=99.97 E-value=5.7e-32 Score=253.58 Aligned_cols=167 Identities=25% Similarity=0.338 Sum_probs=138.1
Q ss_pred hcCccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhhCCeEEEecC
Q 041302 160 RHRKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASEMFEMYIYTM 239 (484)
Q Consensus 160 ~~rKL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~~yEl~IyT~ 239 (484)
..+|++|||||||||||++..+... . |+.-...+......+|+++|||+++||++++++|+|+|||+
T Consensus 12 ~~~k~~LVLDLD~TLvhs~~~~~~~-~------------d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~~~i~I~T~ 78 (181)
T 2ght_A 12 DSDKICVVINLDETLVHSSFKPVNN-A------------DFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTA 78 (181)
T ss_dssp GTTSCEEEECCBTTTEEEESSCCSS-C------------SEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECS
T ss_pred cCCCeEEEECCCCCeECCcccCCCC-c------------cceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhCCCEEEEcC
Confidence 5689999999999999998743211 0 10000001111246899999999999999999999999999
Q ss_pred CcHhHHHHHHhhhCCCCcccceeEEeecCCC---CCccccccccCCCCCcEEEEcCChhhhhcCCCCeEEeccccccccc
Q 041302 240 GDRPYALEMAKLLDPSREYFNARVISRDDGT---QRHQKGLDVVLGQESAVLILDDTENAWTKHRDNLILMERYHFFASS 316 (484)
Q Consensus 240 g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~---~~~~KdL~~l~~~~~~vVIIDD~~~vw~~~~~NlI~I~py~fF~~~ 316 (484)
+.+.||+.|++.|||.+ +|..|++ |++|. ..+.|+|++++.+.+.+|||||++..|..++.|+|+|.+|.
T Consensus 79 ~~~~~a~~vl~~ld~~~-~f~~~~~-rd~~~~~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i~~~~----- 151 (181)
T 2ght_A 79 SLAKYADPVADLLDKWG-AFRARLF-RESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWF----- 151 (181)
T ss_dssp SCHHHHHHHHHHHCTTC-CEEEEEC-GGGSEEETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCCCCCS-----
T ss_pred CCHHHHHHHHHHHCCCC-cEEEEEe-ccCceecCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEecccc-----
Confidence 99999999999999997 8987665 99995 35799999999999999999999999999999999999997
Q ss_pred ccccCCcccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhccCchhHHHHhh
Q 041302 317 CRQFGYHCQSLSQLRSDESELEGALASVLKVLKRIHNIFFDELANDLAGRDVRQVLKM 374 (484)
Q Consensus 317 ~~~~g~~~~sl~e~~~de~~~D~~L~~l~~~L~~IH~~ff~~~~~~~~~~DVr~IL~~ 374 (484)
| +.+|.+|..|+++|+.|+. ..|||.+|++
T Consensus 152 ----~-------------~~~D~eL~~l~~~L~~l~~-----------~~DVr~~l~~ 181 (181)
T 2ght_A 152 ----D-------------NMSDTELHDLLPFFEQLSR-----------VDDVYSVLRQ 181 (181)
T ss_dssp ----S-------------CTTCCHHHHHHHHHHHHTT-----------CSCTHHHHCC
T ss_pred ----C-------------CCChHHHHHHHHHHHHhCc-----------CccHHHHhhC
Confidence 2 4578999999999999973 5799999863
No 5
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=99.96 E-value=3e-30 Score=262.23 Aligned_cols=157 Identities=19% Similarity=0.279 Sum_probs=134.1
Q ss_pred hcCccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhhCCeEEEecC
Q 041302 160 RHRKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASEMFEMYIYTM 239 (484)
Q Consensus 160 ~~rKL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~~yEl~IyT~ 239 (484)
..+|++||||||+||||+.... ..+++++|||+++||+.++++|||+|||+
T Consensus 137 ~~~k~tLVLDLDeTLvh~~~~~-----------------------------~~~~~~~RP~l~eFL~~l~~~yeivIfTa 187 (320)
T 3shq_A 137 REGKKLLVLDIDYTLFDHRSPA-----------------------------ETGTELMRPYLHEFLTSAYEDYDIVIWSA 187 (320)
T ss_dssp CTTCEEEEECCBTTTBCSSSCC-----------------------------SSHHHHBCTTHHHHHHHHHHHEEEEEECS
T ss_pred cCCCcEEEEeccccEEcccccC-----------------------------CCcceEeCCCHHHHHHHHHhCCEEEEEcC
Confidence 4578999999999999997521 12468999999999999999999999999
Q ss_pred CcHhHHHHHHhhhCCCCcc-cceeEEeecCCC---------C-Ccccccccc-----CCCCCcEEEEcCChhhhhcCCCC
Q 041302 240 GDRPYALEMAKLLDPSREY-FNARVISRDDGT---------Q-RHQKGLDVV-----LGQESAVLILDDTENAWTKHRDN 303 (484)
Q Consensus 240 g~r~YA~~I~~~LDP~~~~-F~~RI~sRd~c~---------~-~~~KdL~~l-----~~~~~~vVIIDD~~~vw~~~~~N 303 (484)
+.+.||++|++.|||.+.+ |.+|+| |++|. . .++|||+++ ..++++||||||++.+|..|++|
T Consensus 188 s~~~ya~~vld~Ld~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~~p~N 266 (320)
T 3shq_A 188 TSMRWIEEKMRLLGVASNDNYKVMFY-LDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKS 266 (320)
T ss_dssp SCHHHHHHHHHHTTCTTCSSCCCCEE-ECGGGCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTTSGGG
T ss_pred CcHHHHHHHHHHhCCCCCcceeEEEE-EcCCccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhccCcCc
Confidence 9999999999999999875 788887 88874 1 379999999 67899999999999999999999
Q ss_pred eEEecccccccccccccCCcccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhccCchhHHHHhh
Q 041302 304 LILMERYHFFASSCRQFGYHCQSLSQLRSDESELEGALASVLKVLKRIHNIFFDELANDLAGRDVRQVLKM 374 (484)
Q Consensus 304 lI~I~py~fF~~~~~~~g~~~~sl~e~~~de~~~D~~L~~l~~~L~~IH~~ff~~~~~~~~~~DVr~IL~~ 374 (484)
+|+|.||..... .+.+|.+|..|+++|+.|+. ...|||.++..
T Consensus 267 gI~I~~~~~~~~------------------~~~~D~eL~~L~~~L~~L~~----------~~~DVr~~~~~ 309 (320)
T 3shq_A 267 GLKIRPFRQAHL------------------NRGTDTELLKLSDYLRKIAH----------HCPDFNSLNHR 309 (320)
T ss_dssp EEECCCCCCHHH------------------HTTTCCHHHHHHHHHHHHHH----------HCSCGGGCCGG
T ss_pred eEEeCeEcCCCC------------------CCCccHHHHHHHHHHHHHhc----------cCcchhHHHHH
Confidence 999999972110 13579999999999999973 25799998875
No 6
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=99.96 E-value=3.5e-29 Score=237.66 Aligned_cols=157 Identities=22% Similarity=0.305 Sum_probs=130.2
Q ss_pred hcCccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhhCCeEEEecC
Q 041302 160 RHRKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASEMFEMYIYTM 239 (484)
Q Consensus 160 ~~rKL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~~yEl~IyT~ 239 (484)
..+|++|||||||||||++..+... . |..-...+......+|+++|||+++||++++++|+|+|||+
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~-~------------d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~~~i~I~Ts 91 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISN-A------------DFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFTA 91 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTT-C------------SEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECS
T ss_pred cCCCeEEEEccccceEcccccCCCC-c------------cceeeeecCCceeeEEEEeCcCHHHHHHHHHcCCeEEEEcC
Confidence 4689999999999999998743211 0 10000001111246899999999999999999999999999
Q ss_pred CcHhHHHHHHhhhCCCCcccceeEEeecCCCC---CccccccccCCCCCcEEEEcCChhhhhcCCCCeEEeccccccccc
Q 041302 240 GDRPYALEMAKLLDPSREYFNARVISRDDGTQ---RHQKGLDVVLGQESAVLILDDTENAWTKHRDNLILMERYHFFASS 316 (484)
Q Consensus 240 g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~---~~~KdL~~l~~~~~~vVIIDD~~~vw~~~~~NlI~I~py~fF~~~ 316 (484)
+.+.||+.|++.|||.+ +|..|+ +|++|.. .++|+|++++.+.+.+|||||++..|..++.|+|+|.+|.
T Consensus 92 s~~~~a~~vl~~ld~~~-~f~~~l-~rd~~~~~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~~----- 164 (195)
T 2hhl_A 92 SLAKYADPVADLLDRWG-VFRARL-FRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWF----- 164 (195)
T ss_dssp SCHHHHHHHHHHHCCSS-CEEEEE-CGGGCEEETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCCCS-----
T ss_pred CCHHHHHHHHHHhCCcc-cEEEEE-EcccceecCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEeeec-----
Confidence 99999999999999997 898765 5999963 5799999999999999999999999999999999999997
Q ss_pred ccccCCcccccccccccchhhHHHHHHHHHHHHHHHH
Q 041302 317 CRQFGYHCQSLSQLRSDESELEGALASVLKVLKRIHN 353 (484)
Q Consensus 317 ~~~~g~~~~sl~e~~~de~~~D~~L~~l~~~L~~IH~ 353 (484)
+ +.+|.+|..|+++|+.|+.
T Consensus 165 ----~-------------~~~D~eL~~L~~~L~~l~~ 184 (195)
T 2hhl_A 165 ----D-------------DMTDTELLDLIPFFEGLSR 184 (195)
T ss_dssp ----S-------------CTTCCHHHHHHHHHHHHHC
T ss_pred ----C-------------CCChHHHHHHHHHHHHHHh
Confidence 1 4678999999999999974
No 7
>3l3e_A DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, cell cycle checkpoints, acetylation, cytoplasm, cytoskeleton, DNA damage; HET: DNA; 1.26A {Homo sapiens} PDB: 3pd7_A* 3jve_A*
Probab=99.82 E-value=3.2e-20 Score=159.34 Aligned_cols=94 Identities=17% Similarity=0.238 Sum_probs=83.5
Q ss_pred hhhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEE---cCCCChHHHHHHhcCCeeeChhhH
Q 041302 374 MVRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVS---TDARTEKSRWAAKEAKFLVDPRWI 450 (484)
Q Consensus 374 ~lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa---~~~~T~K~~~A~~~gi~IV~~~WL 450 (484)
+...++|+||+|||+|.++ ..+..++++++++||++..+++++|||||| ...++.|+++|.+.||+||+++||
T Consensus 10 ~~~~~~l~g~~i~isg~~~----~~r~~l~~li~~~Gg~v~~~~s~~~THlI~~~~~~~~~~K~~~A~~~gi~IV~~~Wl 85 (107)
T 3l3e_A 10 EEAPKPLHKVVVCVSKKLS----KKQSELNGIAASLGADYRRSFDETVTHFIYQGRPNDTNREYKSVKERGVHIVSEHWL 85 (107)
T ss_dssp ----CTTTTCEEEECGGGG----GGHHHHHHHHHHTTCEEESSCCTTCCEEECCCCTTCCCHHHHHHHHTTCEEECHHHH
T ss_pred ccccCCCCCeEEEEeCCCh----HhHHHHHHHHHHcCCEEeccccCCceEEEecCCCCCCCHHHHHHHHCCCeEecHHHH
Confidence 3567899999999999986 368899999999999999999999999999 455689999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCCCCC
Q 041302 451 ETANFLWQRQPEENFPVQQTK 471 (484)
Q Consensus 451 ~~c~~~w~r~dE~~Y~l~~~~ 471 (484)
++|+.+|+++||.+|++...+
T Consensus 86 ~~c~~~~~~l~e~~Y~~~~~~ 106 (107)
T 3l3e_A 86 LDCAQECKHLPESLYPHTYNG 106 (107)
T ss_dssp HHHHHHTSCCCGGGCCTTCCC
T ss_pred HHHHHhCCCCchhhCCCCCCC
Confidence 999999999999999986544
No 8
>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=2.4e-19 Score=159.22 Aligned_cols=95 Identities=20% Similarity=0.243 Sum_probs=87.3
Q ss_pred hhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhhHHHHH
Q 041302 375 VRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRWIETAN 454 (484)
Q Consensus 375 lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~WL~~c~ 454 (484)
...++|.||+|||||++ .+.+..|+++++.+||+|..+++++||||||....+.|+++|+++||+||+++||++|+
T Consensus 18 ~~~~~f~g~~i~itG~~----~~~r~~l~~~i~~~Gg~v~~~~s~~~ThLI~~~~~~~K~~~A~~~gi~IV~~~Wl~d~~ 93 (129)
T 2d8m_A 18 ELGKILQGVVVVLSGFQ----NPFRSELRDKALELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCH 93 (129)
T ss_dssp HHTTTSTTEEEEEESCC----TTHHHHHHHHHHHTTEEEESSCCTTCCEEEESSSSCHHHHHHHHHTCEEEETHHHHHHH
T ss_pred CccccCCCeEEEEeCCC----cHHHHHHHHHHHHcCCEEeCCcCCCCeEEEecCCCChHHHHHHHCCCcEecHHHHHHHH
Confidence 34568999999999986 34688999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCCCCCCCCCCc
Q 041302 455 FLWQRQPEENFPVQQTKPE 473 (484)
Q Consensus 455 ~~w~r~dE~~Y~l~~~~~~ 473 (484)
.+|+++||.+|.+...+..
T Consensus 94 ~~~~~l~e~~Y~l~~~~~~ 112 (129)
T 2d8m_A 94 RMRRRLPSQRYLMAGPGSS 112 (129)
T ss_dssp HTTSCCCGGGGBCSSSSCC
T ss_pred HhCCcCChHhcccCCCCcC
Confidence 9999999999999766654
No 9
>3pa6_A Microcephalin; BRCT domain, cell cycle; HET: MSE; 1.50A {Homo sapiens} PDB: 3ktf_A* 2wt8_A*
Probab=99.78 E-value=4.7e-19 Score=152.72 Aligned_cols=99 Identities=19% Similarity=0.169 Sum_probs=87.1
Q ss_pred hhhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhhHHHH
Q 041302 374 MVRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRWIETA 453 (484)
Q Consensus 374 ~lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~WL~~c 453 (484)
.++.++|+||+++|.+....+.......++.+++.+||+|+.++++.|||||+.+.++.|+++|+++||+||+++||++|
T Consensus 2 ~~~~p~f~g~vvyvd~~~~~g~~~~s~~l~~~l~~~GA~v~~~l~~~vTHvV~~~~~~~~~~~A~~~~i~iV~~~Wv~~C 81 (107)
T 3pa6_A 2 HMAAPILKDVVAYVEVWSSNGTENYSKTFTTQLVDMGAKVSKTFNKQVTHVIFKDGYQSTWDKAQKRGVKLVSVLWVEKC 81 (107)
T ss_dssp --CCCTTTTCEEEEEEBCTTSCCBCHHHHHHHHHHTTCEECSSCCTTCCEEEEESCCHHHHHHHHHHTCEEECHHHHHHH
T ss_pred CccccccCCEEEEEeccCCCChhhHHHHHHHHHHHcCCEEecccCCCccEEEEeCCCChHHHHHhcCCCEEECHHHHHHH
Confidence 46788999999999887544432355789999999999999999999999999999889999999999999999999999
Q ss_pred HHhcCCCCCCCCCCCCCCC
Q 041302 454 NFLWQRQPEENFPVQQTKP 472 (484)
Q Consensus 454 ~~~w~r~dE~~Y~l~~~~~ 472 (484)
+..|+++||++|++..++.
T Consensus 82 ~~~~~~vdE~~Y~i~~~~~ 100 (107)
T 3pa6_A 82 RTAGAHIDESLFPAANMNE 100 (107)
T ss_dssp HHHTSCCCGGGSBCCCTTT
T ss_pred HHhCccCChhcccCCCCcc
Confidence 9999999999999877654
No 10
>2cou_A ECT2 protein; BRCT domain, RHO GTPase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.77 E-value=9.5e-20 Score=157.34 Aligned_cols=95 Identities=16% Similarity=0.232 Sum_probs=86.6
Q ss_pred hhhhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhhHHH
Q 041302 373 KMVRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRWIET 452 (484)
Q Consensus 373 ~~lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~WL~~ 452 (484)
.+.|.++|.||+|+|+|+. ..++..|+++++.+||+++..++++|||||+....+.|++.|.++|++||+++||++
T Consensus 6 ~~~~~~~F~g~~i~~sg~~----~~~r~~l~~~i~~~GG~~~~~~~~~~THLV~~~~~~~K~~~a~~~~i~IV~~~Wl~d 81 (109)
T 2cou_A 6 SGFKVPPFQDCILSFLGFS----DEEKHSMEEMTEMQGGSYLPVGDERCTHLIVEENTVKDLPFEPSKKLFVVKQEWFWG 81 (109)
T ss_dssp CSSCCCTTTTCBEEEESSC----HHHHHHHHHHHHHHTCBCCCTTCTTCSEEEECTTTCSSCSSCCCTTSEEECHHHHHH
T ss_pred ccccCCcCCCeEEEecCCC----HHHHHHHHHHHHHcCCEEecccCCCccEEEEeCCccHHHHHHHHCCCeEecHHHHHH
Confidence 4578889999999999953 236889999999999999999999999999999989999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCCCCC
Q 041302 453 ANFLWQRQPEENFPVQQTK 471 (484)
Q Consensus 453 c~~~w~r~dE~~Y~l~~~~ 471 (484)
|+.+|+++||.+|.+....
T Consensus 82 si~~g~~ldE~~Y~~~~~~ 100 (109)
T 2cou_A 82 SIQMDARAGETMYLYEKAN 100 (109)
T ss_dssp HHHTTSCCCGGGTBCCCCC
T ss_pred HHHcCCcCChhccCCCCCC
Confidence 9999999999999986543
No 11
>3l46_A Protein ECT2; alternative splicing, guanine-nucleotide releasing factor, phosphoprotein, polymorphism, proto-oncogene, structural genomics; 1.48A {Homo sapiens}
Probab=99.77 E-value=9.7e-20 Score=158.18 Aligned_cols=99 Identities=16% Similarity=0.203 Sum_probs=84.5
Q ss_pred HHHHhhhhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChh
Q 041302 369 RQVLKMVRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPR 448 (484)
Q Consensus 369 r~IL~~lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~ 448 (484)
|.-+.+.|-++|.||+|||||+. +.++..++++++++||+++..+++++||||+....+.|+..|.++||+||+++
T Consensus 11 ~~~~~~~~~p~F~g~~Ic~sGf~----~~er~~l~~~i~~~GG~~~~~l~~~cTHLV~~~~~~~K~~~A~~~~i~IVs~e 86 (112)
T 3l46_A 11 RENLYFQGVPPFQDCILSFLGFS----DEEKTNMEEMTEMQGGKYLPLGDERCTHLVVEENIVKDLPFEPSKKLYVVKQE 86 (112)
T ss_dssp -------CCCTTTTCEECEESCC----HHHHHHHHHHHHHTTCEECCTTCTTCSEEEECTTTBSSCSSCCCSSCEEEEHH
T ss_pred cccccccCCCccCCeEEEEeCCC----HHHHHHHHHHHHHcCCEECcccCCCceEEEecCCchhhHHHHHHCCeeEecHH
Confidence 45577889999999999999953 24689999999999999999999999999999998899999999999999999
Q ss_pred hHHHHHHhcCCCCCCCCCCCCCC
Q 041302 449 WIETANFLWQRQPEENFPVQQTK 471 (484)
Q Consensus 449 WL~~c~~~w~r~dE~~Y~l~~~~ 471 (484)
||++|+.++.++||..|.+..+.
T Consensus 87 Wl~dsi~~g~~ldE~~Y~~~~~~ 109 (112)
T 3l46_A 87 WFWGSIQMDARAGETMYLYEKAN 109 (112)
T ss_dssp HHHHHHHHTSCCCGGGSBCCC--
T ss_pred HHHHHHHcCCccChhhceeccCC
Confidence 99999999999999999996543
No 12
>4id3_A DNA repair protein REV1; BRCT domain, protein binding; HET: DNA; 1.97A {Saccharomyces cerevisiae S288C}
Probab=99.72 E-value=9.7e-18 Score=138.87 Aligned_cols=87 Identities=20% Similarity=0.246 Sum_probs=75.7
Q ss_pred hcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecC--CCccEEEEcCCCChHHHHHHhcCCeeeChhhHHHH
Q 041302 376 RGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELD--PSVTHVVSTDARTEKSRWAAKEAKFLVDPRWIETA 453 (484)
Q Consensus 376 r~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~--~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~WL~~c 453 (484)
..++|+||+|+|+|+. .+.+..++++++.+||++...++ +++||||+.+..+.|+..+ .|++||+|+||++|
T Consensus 4 ~~~~f~g~~~~i~g~~----~~~~~~l~~~i~~~GG~~~~~~~~~~~~THlI~~~~~~~K~~~~--~~~~iV~~~Wi~dc 77 (92)
T 4id3_A 4 SSKIFKNCVIYINGYT----KPGRLQLHEMIVLHGGKFLHYLSSKKTVTHIVASNLPLKKRIEF--ANYKVVSPDWIVDS 77 (92)
T ss_dssp --CTTTTCEEEECSCC----SSCHHHHHHHHHHTTCEEESSCCCTTTCCEEECSCCCHHHHHHT--TTSCEECTHHHHHH
T ss_pred cccccCCEEEEEeCCC----CcCHHHHHHHHHHCCCEEEEEecCCCceEEEEecCCCHHHHHHc--CCCCEEcccHHHHH
Confidence 4579999999999953 23578999999999999999998 8999999999888885433 78999999999999
Q ss_pred HHhcCCCCCCCCCCC
Q 041302 454 NFLWQRQPEENFPVQ 468 (484)
Q Consensus 454 ~~~w~r~dE~~Y~l~ 468 (484)
+.+|+++||++|.|+
T Consensus 78 i~~~~~l~e~~Y~l~ 92 (92)
T 4id3_A 78 VKEARLLPWQNYSLT 92 (92)
T ss_dssp HHHTSCCCGGGGBCC
T ss_pred HHcCCcCChhhcccC
Confidence 999999999999874
No 13
>2ebw_A DNA repair protein REV1; A/B/A 3 layers, parallel beta-sheet, DNA replication, translession synthesis, TLS, DNA polymerase zeta, PCNA; HET: DNA; NMR {Homo sapiens}
Probab=99.66 E-value=1.2e-16 Score=134.19 Aligned_cols=87 Identities=13% Similarity=0.189 Sum_probs=77.7
Q ss_pred hcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecC-CCccEEEEcCCCChHHHHHHhcCCeeeChhhHHHHH
Q 041302 376 RGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELD-PSVTHVVSTDARTEKSRWAAKEAKFLVDPRWIETAN 454 (484)
Q Consensus 376 r~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~-~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~WL~~c~ 454 (484)
..++|+||+|+++|.. .+.+..|.+++..+||++..+++ ..+||+|+.+..+.|++.+. +++||+|+||++|+
T Consensus 9 ~~~lF~g~~~~isg~~----~~~~~~L~~~i~~~GG~~~~~~~~~~~THlI~~~~~~~k~~~~~--~~~iV~p~Wl~dci 82 (97)
T 2ebw_A 9 SSTIFSGVAIYVNGYT----DPSAEELRKLMMLHGGQYHVYYSRSKTTHIIATNLPNAKIKELK--GEKVIRPEWIVESI 82 (97)
T ss_dssp CCCTTTTCEEEECSSC----SSCHHHHHHHHHHTTCEECSSCCSSSCCEEECSCCCTTHHHHTS--SSCCBCTHHHHHHH
T ss_pred CCCCCCCeEEEEeCCC----cccHHHHHHHHHHcCCEEeeecCCCCCEEEEecCCChHHHHHhc--CCCEeChHHHHHHH
Confidence 4679999999999963 34578999999999999998776 68999999999889988765 89999999999999
Q ss_pred HhcCCCCCCCCCCC
Q 041302 455 FLWQRQPEENFPVQ 468 (484)
Q Consensus 455 ~~w~r~dE~~Y~l~ 468 (484)
.+++++||++|.+-
T Consensus 83 ~~~~~l~~~~Y~l~ 96 (97)
T 2ebw_A 83 KAGRLLSYIPYQLY 96 (97)
T ss_dssp HHTSCCCSGGGBSC
T ss_pred HcCCccCchHcEec
Confidence 99999999999873
No 14
>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*
Probab=99.62 E-value=4.3e-16 Score=156.74 Aligned_cols=97 Identities=13% Similarity=0.193 Sum_probs=87.6
Q ss_pred HhhhhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecC-CCccEEEEcCCCChHHHHHHhcCCeeeChhhH
Q 041302 372 LKMVRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELD-PSVTHVVSTDARTEKSRWAAKEAKFLVDPRWI 450 (484)
Q Consensus 372 L~~lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~-~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~WL 450 (484)
....+.++|+||+|+|||+.+ +++..+..+++.+||+++.+++ ++|||||+....+.|+..|+++||+||+++||
T Consensus 192 ~~~~~~~~f~g~~i~~tG~~~----~~r~~l~~li~~~GG~~~~~ls~~~~THLI~~~~~g~K~~~A~~~gi~IV~~~Wl 267 (298)
T 3olc_X 192 MEDFKCPIFLGCIICVTGLCG----LDRKEVQQLTVKHGGQYMGQLKMNECTHLIVQEPKGQKYECAKRWNVHCVTTQWF 267 (298)
T ss_dssp GGGGBCCTTTTCEEEECSCCH----HHHHHHHHHHHHTTCEECSSCCTTTCCEEECSSSCSHHHHHHHHTTCEEECHHHH
T ss_pred cccccccccCCeEEEEeCCCC----ccHHHHHHHHHHcCCEEeceecCCCceEEEEeCCCchHHHHHHHCCCeEEeHHHH
Confidence 456788999999999999754 3688999999999999999999 89999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCCCCCC
Q 041302 451 ETANFLWQRQPEENFPVQQTKP 472 (484)
Q Consensus 451 ~~c~~~w~r~dE~~Y~l~~~~~ 472 (484)
++|+.+|+++||++|.+....+
T Consensus 268 ~dsi~~g~~lde~~Y~l~~~~~ 289 (298)
T 3olc_X 268 FDSIEKGFCQDESIYKTEPRPE 289 (298)
T ss_dssp HHHHHHTSCCCGGGSBSCC---
T ss_pred HHHHHCCCCCCchhcCCCCCch
Confidence 9999999999999999976654
No 15
>1wf6_A Similar to S.pombe -RAD4+/CUT5+product (A40727); BRCT, topoisomerase II binding protein, checkpoint; NMR {Homo sapiens} SCOP: c.15.1.5
Probab=99.62 E-value=8.1e-16 Score=136.92 Aligned_cols=100 Identities=15% Similarity=0.192 Sum_probs=84.0
Q ss_pred hhHHHHhhhhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHh---cCCe
Q 041302 367 DVRQVLKMVRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAK---EAKF 443 (484)
Q Consensus 367 DVr~IL~~lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~---~gi~ 443 (484)
++...+++++..+|+||+|+|+|+- ...+..++++++.+||++...+++.|||||+.++ +.+++.+.+ .+++
T Consensus 28 ~~d~~~~~~~~~lF~g~~i~i~G~~----~~~~~~L~~~i~~~Gg~v~~~l~~~vTHvI~~~~-~~~~~~~~~~~~~~~~ 102 (132)
T 1wf6_A 28 NLDVSAFQAPEDLLDGCRIYLCGFS----GRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDY-DDELKQFWNKSAHRPH 102 (132)
T ss_dssp TCCGGGCCCCTTTTTTCEEEEESCC----SHHHHHHHHHHHHTTCEEESSCCSSCCEEEESSC-CSHHHHHHHHSCCCCC
T ss_pred hcCcccccccccccCCEEEEEECCC----hHHHHHHHHHHHHCCCEEeCcCCCCCeEEEECCc-hHHHHHHHHhhCCCCe
Confidence 4445667888999999999999972 3467889999999999999999999999999874 455555443 4789
Q ss_pred eeChhhHHHHHHhcCCCCCCCCCCCCCC
Q 041302 444 LVDPRWIETANFLWQRQPEENFPVQQTK 471 (484)
Q Consensus 444 IV~~~WL~~c~~~w~r~dE~~Y~l~~~~ 471 (484)
||+|+||++|+..|+++||++|.+..+.
T Consensus 103 iV~~~Wv~dsi~~~~ll~e~~Y~~~~~s 130 (132)
T 1wf6_A 103 VVGAKWLLECFSKGYMLSEEPYIHSGPS 130 (132)
T ss_dssp EEEHHHHHHHHHHSSCCCSGGGBCCCSC
T ss_pred EechHHHHHHHHcCCcCCHhhccCCCCC
Confidence 9999999999999999999999876554
No 16
>3pc6_A DNA repair protein XRCC1; BRCT domain, protein:protein interactions, DNA L III-alpha BRCT2 domain, DNA binding protein; HET: DNA; 1.90A {Mus musculus} SCOP: c.15.1.1 PDB: 3pc8_A* 3qvg_B* 1cdz_A
Probab=99.59 E-value=3.3e-15 Score=127.91 Aligned_cols=88 Identities=18% Similarity=0.275 Sum_probs=80.8
Q ss_pred ccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhc--CCeeeChhhHHHHHH
Q 041302 378 EVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKE--AKFLVDPRWIETANF 455 (484)
Q Consensus 378 ~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~--gi~IV~~~WL~~c~~ 455 (484)
.+|.||+++|+|.+|. .++..+++++.++||.|...++.+|||+|+.++.+.|++.|++. ++++|+|+||++|+.
T Consensus 6 d~F~g~~f~l~~~~p~---~~r~~l~ryiia~GG~v~~~~~~~vTHvIt~~~~d~~~~~a~~~~p~~~~V~P~WI~~Ci~ 82 (104)
T 3pc6_A 6 DFFEGKHFFLYGEFPG---DERRRLIRYVTAFNGELEDYMNERVQFVITAQEWDPNFEEALMENPSLAFVRPRWIYSCNE 82 (104)
T ss_dssp CTTTTCEEEEESCCST---THHHHHHHHHHHTTCEECSSCCTTCCEEEESSCCCHHHHHHHTTCTTCEEECHHHHHHHHH
T ss_pred hhhCCeEEEEcCCCcH---HHHHHHHHHHHHcCCEEEcccCCCceEEEeCCCCChhHHHHhhhCCCCeEEccHHHHHHHh
Confidence 5899999999999873 36788999999999999999999999999999999999988863 799999999999999
Q ss_pred hcCCCCCCCCCCC
Q 041302 456 LWQRQPEENFPVQ 468 (484)
Q Consensus 456 ~w~r~dE~~Y~l~ 468 (484)
+|+.+|+++|.+.
T Consensus 83 ~~klvp~~~y~~~ 95 (104)
T 3pc6_A 83 KQKLLPHQLYGVV 95 (104)
T ss_dssp HTSCCCGGGGBCC
T ss_pred cCccCCcccceec
Confidence 9999999999874
No 17
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=99.52 E-value=1.1e-14 Score=139.92 Aligned_cols=91 Identities=19% Similarity=0.225 Sum_probs=81.3
Q ss_pred hcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCC------CChHHHHHHhcCCeeeChhh
Q 041302 376 RGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDA------RTEKSRWAAKEAKFLVDPRW 449 (484)
Q Consensus 376 r~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~------~T~K~~~A~~~gi~IV~~~W 449 (484)
|.+.+++++|+|||+.+. ++..+.++++.+||.+..++++.|||||+... +|.|+..|+..|++||+++|
T Consensus 1 ~~~~~~~~~i~~sg~~~~----~~~~l~~~~~~~G~~~~~~~~~~~THlI~~~~~~~~~~rt~K~~~a~~~g~~IV~~~W 76 (229)
T 1l0b_A 1 KERAERDISMVVSGLTPK----EVMIVQKFAEKYRLALTDVITEETTHVIIKTDAEFVCERTLKYFLGIAGGKWIVSYSW 76 (229)
T ss_dssp --CCCCCCEEEEESCCHH----HHHHHHHHHHHTTCEECSSCCSSCCEEEECBCTTSEECCCHHHHHHHHTTCEEEETHH
T ss_pred CCCCCCCeEEEEcCCCHH----HHHHHHHHHHHcCCEEeCCcCCCCCEEEEcCCccccccccHHHHHHHHCCCcEecHHH
Confidence 457799999999997432 46789999999999999999999999999974 79999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCC
Q 041302 450 IETANFLWQRQPEENFPVQQT 470 (484)
Q Consensus 450 L~~c~~~w~r~dE~~Y~l~~~ 470 (484)
|.+|+..++.+||++|.+...
T Consensus 77 l~~~~~~~~~~~e~~y~~~~~ 97 (229)
T 1l0b_A 77 VIKSIQERKLLSVHEFEVKGD 97 (229)
T ss_dssp HHHHHTTTSCCCSGGGBCCEE
T ss_pred HHHHHHCCCcCChHHeEeccc
Confidence 999999999999999998643
No 18
>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A
Probab=99.48 E-value=3e-14 Score=135.49 Aligned_cols=86 Identities=21% Similarity=0.212 Sum_probs=78.6
Q ss_pred cceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcC---CCChHHHHHHhcCCeeeChhhHHHHHHhc
Q 041302 381 KGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTD---ARTEKSRWAAKEAKFLVDPRWIETANFLW 457 (484)
Q Consensus 381 ~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~---~~T~K~~~A~~~gi~IV~~~WL~~c~~~w 457 (484)
.|++|++||+.+ .++..+.++++.+||.+..++++.|||||+.. .+|.|+..|+..|++||+++||.+|+..+
T Consensus 1 ~~~vi~~sg~~~----~~~~~l~~~~~~~G~~~~~~~~~~~THlV~~~~~~~rt~K~l~a~~~g~~IV~~~Wl~~c~~~~ 76 (210)
T 2nte_A 1 GPLVLIGSGLSS----EQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEWVKACLRRK 76 (210)
T ss_dssp CCCEEEESSCCH----HHHHHHHHHHHHTTCEEESSCCTTCCEEEESSSSCCCSHHHHHHHHTTCEEEETHHHHHHHHHT
T ss_pred CCEEEEECCCCH----HHHHHHHHHHHHcCCEEeCCCCCCCeEEEEcCCCcchHHHHHHHHhcCCEEecHHHHHHHHHcC
Confidence 378999999743 35678999999999999999999999999987 68999999999999999999999999999
Q ss_pred CCCCCCCCCCCCC
Q 041302 458 QRQPEENFPVQQT 470 (484)
Q Consensus 458 ~r~dE~~Y~l~~~ 470 (484)
+.+||++|.+...
T Consensus 77 ~~~~e~~y~~~~~ 89 (210)
T 2nte_A 77 VCEQEEKYEIPEG 89 (210)
T ss_dssp SCCCGGGTBCTTH
T ss_pred CcCChhhccCCCC
Confidence 9999999999753
No 19
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=99.48 E-value=2e-14 Score=138.44 Aligned_cols=93 Identities=19% Similarity=0.220 Sum_probs=83.1
Q ss_pred hhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCC-CChHHHHHHhcCCeeeChhhHHHH
Q 041302 375 VRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDA-RTEKSRWAAKEAKFLVDPRWIETA 453 (484)
Q Consensus 375 lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~-~T~K~~~A~~~gi~IV~~~WL~~c 453 (484)
|+-.++.|++|+|||+.+. ++..+.++++.+||.+..++ .++||||+.+. +|.|+..|+..|++||+|+||.+|
T Consensus 9 ~~~~~~~~~~i~~SG~~~~----~~~~l~~~i~~lGg~v~~~~-~~~THLI~~~~~rT~K~l~A~~~g~~IVs~~Wl~~c 83 (219)
T 3sqd_A 9 MKLTPELTPFVLFTGFEPV----QVQQYIKKLYILGGEVAESA-QKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEEC 83 (219)
T ss_dssp CCCCGGGCCEEEECSCCHH----HHHHHHHHHHHTTCEECSSG-GGCSEEECSSCCCCHHHHHHTTTCSEEECHHHHHHH
T ss_pred cccCCCCCeEEEEeCCChH----HHHHHHHHHHHCCCEEeCCC-CCceEEEECCCCCCHHHHHHHHcCCCEecHHHHHHH
Confidence 6778899999999997433 45788999999999999887 79999999875 688999999999999999999999
Q ss_pred HHhcCCCCCCCCCCCCCCC
Q 041302 454 NFLWQRQPEENFPVQQTKP 472 (484)
Q Consensus 454 ~~~w~r~dE~~Y~l~~~~~ 472 (484)
+..|+.+||++|.+..+..
T Consensus 84 ~~~~~~l~e~~y~l~d~~~ 102 (219)
T 3sqd_A 84 FRCQKFIDEQNYILRDAEA 102 (219)
T ss_dssp HHHTSCCCSGGGBCCCHHH
T ss_pred HHcCCCCChHhccCCCchh
Confidence 9999999999999986543
No 20
>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A
Probab=99.45 E-value=5.7e-14 Score=133.94 Aligned_cols=89 Identities=16% Similarity=0.147 Sum_probs=74.2
Q ss_pred hhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCC-CChHHHHHHhcCCeeeChhhHHHH
Q 041302 375 VRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDA-RTEKSRWAAKEAKFLVDPRWIETA 453 (484)
Q Consensus 375 lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~-~T~K~~~A~~~gi~IV~~~WL~~c 453 (484)
-+++.++|++|+|||+.+ ..+.++++.+||.+..+++ ++||||+.+. +|.|+..|+..|++||+++||.+|
T Consensus 5 ~~~~~~~~~~v~~sG~~~-------~~~~~~i~~lGg~~~~~~~-~~THlI~~~~~rt~K~l~a~~~g~~IV~~~Wl~~~ 76 (209)
T 2etx_A 5 KLNQESTAPKVLFTGVVD-------ARGERAVLALGGSLAGSAA-EASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQS 76 (209)
T ss_dssp -------CCEEEECSSCC-------HHHHHHHHHTTCEECSSTT-TCSEEECSSCCCSHHHHHHHHHTCCEECTHHHHHH
T ss_pred cccccCCCcEEEEeCCCc-------HHHHHHHHHCCCEEeCCCC-CceEEEECCCCCCHHHHHHHhcCCccccHHHHHHH
Confidence 467889999999999853 2468999999999999998 5999999875 699999999999999999999999
Q ss_pred HHhcCCCCCCCCCCCCCC
Q 041302 454 NFLWQRQPEENFPVQQTK 471 (484)
Q Consensus 454 ~~~w~r~dE~~Y~l~~~~ 471 (484)
+..++.+||++|.+..+.
T Consensus 77 ~~~~~~l~e~~y~~~~~~ 94 (209)
T 2etx_A 77 RKAGFFLPPDEYVVTDPE 94 (209)
T ss_dssp HHHTSCCCSGGGBCCCHH
T ss_pred HHcCCCCChhhccccChh
Confidence 999999999999997543
No 21
>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A
Probab=99.45 E-value=8.4e-14 Score=131.84 Aligned_cols=85 Identities=24% Similarity=0.267 Sum_probs=77.1
Q ss_pred cceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCC------CChHHHHHHhcCCeeeChhhHHHHH
Q 041302 381 KGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDA------RTEKSRWAAKEAKFLVDPRWIETAN 454 (484)
Q Consensus 381 ~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~------~T~K~~~A~~~gi~IV~~~WL~~c~ 454 (484)
+|++|++||+.+ .++..+.++++.+||.+..++++.|||||+... .|.|+..|+..|++||+++||.+|+
T Consensus 3 ~~~~~~~sg~~~----~~~~~l~~~~~~~G~~~~~~~~~~~THli~~~~~~~~~~rt~k~~~a~~~g~~IV~~~Wl~~~~ 78 (214)
T 1t15_A 3 KRMSMVVSGLTP----EEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSI 78 (214)
T ss_dssp -CCEEEEESCCH----HHHHHHHHHHHHHTCEECSSCCTTCCEEEECBCTTSEECCBHHHHHHHHTTCEEEETHHHHHHH
T ss_pred CcEEEEECCCCH----HHHHHHHHHHHHhCCEEeCccCCCCcEEEEeCCcccchhhhHHHHHHHhcCCEEeCHHHHHHHH
Confidence 689999999743 356789999999999999999999999999975 5999999999999999999999999
Q ss_pred HhcCCCCCCCCCCCC
Q 041302 455 FLWQRQPEENFPVQQ 469 (484)
Q Consensus 455 ~~w~r~dE~~Y~l~~ 469 (484)
..++.+||++|.+..
T Consensus 79 ~~~~~~~e~~y~~~~ 93 (214)
T 1t15_A 79 KERKMLNEHDFEVRG 93 (214)
T ss_dssp HTTSCCCGGGGBCCE
T ss_pred HCCCcCChHHeEeec
Confidence 999999999999864
No 22
>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*
Probab=99.35 E-value=1.1e-12 Score=127.53 Aligned_cols=89 Identities=20% Similarity=0.279 Sum_probs=77.9
Q ss_pred ccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEee--ecCCCccEEEEcCC-CChHHHHHHhcCCeeeChhhHHHHH
Q 041302 378 EVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSI--ELDPSVTHVVSTDA-RTEKSRWAAKEAKFLVDPRWIETAN 454 (484)
Q Consensus 378 ~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~--~i~~~vTHlVa~~~-~T~K~~~A~~~gi~IV~~~WL~~c~ 454 (484)
++.++.+|+|||+.+ .++..+.++++.+||.+.. +++++|||||+... .|.|+..|+..|++||+++||.+|+
T Consensus 5 ~~~~~~~~~~Sg~~~----~~~~~l~~~i~~LGg~~~~~~~~~~~~THlV~~~~~RT~K~l~aia~G~wIvs~~wl~~s~ 80 (235)
T 3al2_A 5 SLKKQYIFQLSSLNP----QERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPLRNEKYLASVAAGKWVLHRSYLEACR 80 (235)
T ss_dssp ---CCCEEEEESCCH----HHHHHHHHHHHHTTCEECCSSSCCTTCCEEEESSCCCSHHHHHHHHTTCEEECTHHHHHHH
T ss_pred cCCCCEEEEEcCCCH----HHHHHHHHHHHHcCCEEeccCCCCCCCcEEEECCCCCCHHHHHHHHcCCcCccHHHHHHHH
Confidence 456789999999742 3567899999999999975 58899999999986 5999999999999999999999999
Q ss_pred HhcCCCCCCCCCCCCC
Q 041302 455 FLWQRQPEENFPVQQT 470 (484)
Q Consensus 455 ~~w~r~dE~~Y~l~~~ 470 (484)
...+.+||++|.+..+
T Consensus 81 ~~g~~l~E~~ye~~~~ 96 (235)
T 3al2_A 81 TAGHFVQEEDYEWGSS 96 (235)
T ss_dssp HHTSCCCSGGGBTTSH
T ss_pred HcCCCCChhceeecCc
Confidence 9999999999999764
No 23
>2jw5_A DNA polymerase lambda; BRCT domain, family X polymerase, nonhomologous END joining (NHEJ), DNA damage, DNA repair, DNA replication, DNA synthesis; HET: DNA; NMR {Homo sapiens}
Probab=99.34 E-value=1.6e-12 Score=111.56 Aligned_cols=93 Identities=16% Similarity=0.113 Sum_probs=72.8
Q ss_pred hhhcccccceeeeeeeccCCCCCcchHH-HHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHH-Hh-----cCCeeeC
Q 041302 374 MVRGEVLKGCKLVFSHVFPTKFPADTHY-LWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWA-AK-----EAKFLVD 446 (484)
Q Consensus 374 ~lr~~vL~G~~IvfSG~~p~~~~~~~~~-l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A-~~-----~gi~IV~ 446 (484)
+.+..+|+||+++| +|.+....+.. ...+|..+||+++.++++.|||||+.+..+.+.... ++ .+++||+
T Consensus 6 ~~~~~~F~g~~v~~---~p~~~~~~r~~i~~~~a~~~Ga~v~~~~~~~vTHVVvd~~~s~~~~l~~l~~~~l~~~~~iV~ 82 (106)
T 2jw5_A 6 EEAEEWLSSLRAHV---VRTGIGRARAELFEKQIVQHGGQLCPAQGPGVTHIVVDEGMDYERALRLLRLPQLPPGAQLVK 82 (106)
T ss_dssp CCGGGCGGGSCCCB---CTTTCCSSSTTHHHHHHHHTTCCCCSTTCTTCCEEEECSSSCHHHHHHHTTCSSCCSSCEEEE
T ss_pred ccCcCEeCCeEEEE---EecCCchHHHHHHHHHHHHcCCEEeeccCCCccEEEEcCCCCHHHHHHHHhhcccCCCcEEec
Confidence 46789999999997 56555333434 455999999999999999999999986555443221 11 3578999
Q ss_pred hhhHHHHHHhcCCCCCCCCCCCC
Q 041302 447 PRWIETANFLWQRQPEENFPVQQ 469 (484)
Q Consensus 447 ~~WL~~c~~~w~r~dE~~Y~l~~ 469 (484)
++|+++|+..|+.+||+.|.+..
T Consensus 83 ~~Wv~dci~~~~llde~~y~~~~ 105 (106)
T 2jw5_A 83 SAWLSLCLQERRLVDVAGFSIFI 105 (106)
T ss_dssp HHHHHHHHHTCSCCCGGGTBCSC
T ss_pred CchHHHHHhcCcccCcccccccC
Confidence 99999999999999999998753
No 24
>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*
Probab=99.33 E-value=1.3e-12 Score=131.32 Aligned_cols=85 Identities=20% Similarity=0.252 Sum_probs=77.6
Q ss_pred cccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhhHHHHHHh
Q 041302 377 GEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRWIETANFL 456 (484)
Q Consensus 377 ~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~WL~~c~~~ 456 (484)
..+|+|++|||||+.+. ++..+..+++.+||++..+++++|||||+...+|.|++.|.+.||+||+|+||.+|+..
T Consensus 103 ~~~l~g~~~~~tG~~~~----~r~~l~~~i~~~GG~v~~~~t~~tTHLI~~~~~t~Ky~~A~~~gi~IV~~~Wl~~c~~~ 178 (298)
T 3olc_X 103 NMVMSDVTISCTSLEKE----KREEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEK 178 (298)
T ss_dssp CCTTTTCEEEEESCCHH----HHHHHHHHHHHTTCEECSSCCTTCCEEEESSSCSHHHHHHHHTTCCEECHHHHHHHHHH
T ss_pred ccccCCeEEEeCCCcHH----hHHHHHHHHHHCCCEEecCcCCCeeEEEEeCCCChHHHHHHHCCCeEeeHHHHHHHHHc
Confidence 46899999999998652 67899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCC
Q 041302 457 WQRQPEENF 465 (484)
Q Consensus 457 w~r~dE~~Y 465 (484)
.+.++...|
T Consensus 179 ~~~~~~~~~ 187 (298)
T 3olc_X 179 SQEKKITRY 187 (298)
T ss_dssp HHTTCCSSG
T ss_pred CCcCCcccc
Confidence 887766544
No 25
>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*
Probab=99.30 E-value=3.7e-12 Score=120.81 Aligned_cols=87 Identities=17% Similarity=0.231 Sum_probs=76.9
Q ss_pred ceeeeeeeccCCCCCcchHHHHHHHHHhCC-eEeeecCCCccEEEEcCC-CChHHHHHHhcCCeeeChhhHHHHHHhcCC
Q 041302 382 GCKLVFSHVFPTKFPADTHYLWKMAEQLGA-TCSIELDPSVTHVVSTDA-RTEKSRWAAKEAKFLVDPRWIETANFLWQR 459 (484)
Q Consensus 382 G~~IvfSG~~p~~~~~~~~~l~~la~~lGA-~v~~~i~~~vTHlVa~~~-~T~K~~~A~~~gi~IV~~~WL~~c~~~w~r 459 (484)
.-+|++||+-+ .++..+.+++..+|| .++.++++.|||||+... +|.|+..|+..|++||+++||.+|+...+.
T Consensus 11 ~~~~~~sgl~~----~~~~~l~~~i~~lgG~~~~~~~~~~~THlv~~~~~rT~K~l~ai~~g~~Iv~~~Wv~~~~~~g~~ 86 (199)
T 3u3z_A 11 TRTLVMTSMPS----EKQNVVIQVVDKLKGFSIAPDVCETTTHVLSGKPLRTLNVLLGIARGCWVLSYDWVLWSLELGHW 86 (199)
T ss_dssp CCEEEEESCCH----HHHHHHHHHHHHHCSCEEESSCCTTEEEEEESSCCCBHHHHHHHHTTCEEEETHHHHHHHHHTSC
T ss_pred CeEEEEcCCCH----HHHHHHHHHHHHcCCcEEecCCCCCCeEEEECCCCCCHHHHHHHHCCCcEEeHHHHHHHhhCCCC
Confidence 56789999632 256778999999977 777999999999999985 899999999999999999999999999999
Q ss_pred CCCCCCCCCCCCC
Q 041302 460 QPEENFPVQQTKP 472 (484)
Q Consensus 460 ~dE~~Y~l~~~~~ 472 (484)
+||++|.+.....
T Consensus 87 l~e~~y~~~~~~~ 99 (199)
T 3u3z_A 87 ISEEPFELSHHFP 99 (199)
T ss_dssp CCSGGGBCTTTCT
T ss_pred CChhhccccCCcc
Confidence 9999999988765
No 26
>3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A*
Probab=99.30 E-value=9.5e-13 Score=126.93 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=75.3
Q ss_pred ccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCC-CChHHHHHHhcCCeeeChhhHHHHHHh
Q 041302 378 EVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDA-RTEKSRWAAKEAKFLVDPRWIETANFL 456 (484)
Q Consensus 378 ~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~-~T~K~~~A~~~gi~IV~~~WL~~c~~~ 456 (484)
+.-++.+|+|||+.+.. ..++++.+||.+..+++ ++||||+.+. +|.|+..|+..|++||+|+||.+|+..
T Consensus 4 ~~~~~~~v~fSG~~~~~-------~~~~i~~lGg~v~~~~~-~~THlV~~~~~RT~K~l~Aia~g~~IVs~~Wl~~~~~~ 75 (220)
T 3l41_A 4 KASKRVYITFTGYDKKP-------SIDNLKKLDMSITSNPS-KCTHLIAPRILRTSKFLCSIPYGPCVVTMDWINSCLKT 75 (220)
T ss_dssp ---CCEEEEECSCSSCC-------CCGGGGGGTEEECSCTT-TCSEEECSSCCCBHHHHHHGGGCCEEECHHHHHHHHHH
T ss_pred cccceEEEEEeccCCCC-------CcchHhhcceeeccCch-hhhhhhhhhHhhhcceeecCCCCCeEEEhHHHHhhhhh
Confidence 34678999999987653 17788999999999986 6999999876 799999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCC
Q 041302 457 WQRQPEENFPVQQTKP 472 (484)
Q Consensus 457 w~r~dE~~Y~l~~~~~ 472 (484)
++.+||++|.+.++..
T Consensus 76 ~~~l~e~~y~l~d~~~ 91 (220)
T 3l41_A 76 HEIVDEEPYLLNDPEK 91 (220)
T ss_dssp TSCCCSGGGBCCCHHH
T ss_pred hhccccCccccCCcHH
Confidence 9999999999986543
No 27
>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A*
Probab=99.23 E-value=5.5e-12 Score=124.53 Aligned_cols=93 Identities=11% Similarity=0.054 Sum_probs=69.9
Q ss_pred hhcccccceeeeeeeccCCCC-----Cc-chHHHHHHHHHhCCeEeeecCCCccEEEEcCCCCh-HHHHHHh----cCCe
Q 041302 375 VRGEVLKGCKLVFSHVFPTKF-----PA-DTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTE-KSRWAAK----EAKF 443 (484)
Q Consensus 375 lr~~vL~G~~IvfSG~~p~~~-----~~-~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~-K~~~A~~----~gi~ 443 (484)
.+..+|+||+++|.+.-..+. .. ....+..++..+||++...+++.|||||+.+..+. +...+.+ .+++
T Consensus 160 ~~~~lF~~~~vy~~~~~~~~~~~~~i~~~~l~~~~~~i~~~GG~v~~~l~~~vTHVVv~~~~~r~~~~~~~~~~~~~~~~ 239 (263)
T 3ii6_X 160 SPLSMFRRHTVYLDSYAVINDLSTKNEGTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFK 239 (263)
T ss_dssp CGGGTTTTCEEEECCBSSTTCGGGBCCSSHHHHHHHHHHHTTCEEESSCCTTCCEEEECSCCTTHHHHHHHHHTCSSCCE
T ss_pred CcchhhCCeEEEEecccccCCcccccchhHHHHHHHHHHccCCEEecCCCCCceEEEECCCCccHHHHHHHHhhcCCCCE
Confidence 567899999999976432221 11 12234788999999999999999999999874331 1112222 3689
Q ss_pred eeChhhHHHHHHhcCCCCCCCCCC
Q 041302 444 LVDPRWIETANFLWQRQPEENFPV 467 (484)
Q Consensus 444 IV~~~WL~~c~~~w~r~dE~~Y~l 467 (484)
||+|+||++|+..++++||++|.+
T Consensus 240 iV~~~Wv~dci~~~~~l~E~~Y~i 263 (263)
T 3ii6_X 240 ILKESWVTDSIDKCELQEENQYLI 263 (263)
T ss_dssp EEETHHHHHHHHTTSCCCGGGTBC
T ss_pred EeChHHHHHHHHcCCcCCHhhCCC
Confidence 999999999999999999999975
No 28
>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A*
Probab=99.21 E-value=1.9e-11 Score=120.71 Aligned_cols=94 Identities=10% Similarity=0.049 Sum_probs=77.4
Q ss_pred Hhhhhcccccceeeee-eeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcC-CeeeChhh
Q 041302 372 LKMVRGEVLKGCKLVF-SHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEA-KFLVDPRW 449 (484)
Q Consensus 372 L~~lr~~vL~G~~Ivf-SG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~g-i~IV~~~W 449 (484)
|+....++|+|+.|++ +|. ..+.+..|.+++.++||++..+.++.+||+||.+ .|.|++.|++.| ++||+|+|
T Consensus 3 ~~~~~s~lF~G~~f~V~sg~----~~~~k~~L~~lI~~~GG~v~~n~~~~t~~iIa~~-~~~k~~~~~~~g~~~IV~p~W 77 (263)
T 3ii6_X 3 MGSKISNIFEDVEFCVMSGT----DSQPKPDLENRIAEFGGYIVQNPGPDTYCVIAGS-ENIRVKNIILSNKHDVVKPAW 77 (263)
T ss_dssp ---CCCCTTTTCEEEECCCC------CCHHHHHHHHHHTTCEECSSCCTTEEEEECSS-CCHHHHHHHHSCSCCEECHHH
T ss_pred CCCcCcccCCCeEEEEEcCC----CCCCHHHHHHHHHHcCCEEEecCCCCEEEEEeCC-CCHHHHHHHhcCCCCEeehHH
Confidence 5667899999999987 663 2467899999999999999998887777777765 469999999987 99999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCC
Q 041302 450 IETANFLWQRQPEENFPVQQT 470 (484)
Q Consensus 450 L~~c~~~w~r~dE~~Y~l~~~ 470 (484)
|.+|+.+++.+|.++|.+-..
T Consensus 78 v~Dci~~~~llp~~p~~~~~~ 98 (263)
T 3ii6_X 78 LLECFKTKSFVPWQPRFMIHM 98 (263)
T ss_dssp HHHHHHHTSCCCCCGGGEEEC
T ss_pred HHHHHhcCCcCCCCHHHHhhC
Confidence 999999999999999876433
No 29
>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B
Probab=99.18 E-value=3.4e-11 Score=118.62 Aligned_cols=94 Identities=12% Similarity=0.130 Sum_probs=81.0
Q ss_pred hcccccceeeeeeeccCCCC-------------------------CcchHHHHHHHHHhCCeEeeecCCC------ccEE
Q 041302 376 RGEVLKGCKLVFSHVFPTKF-------------------------PADTHYLWKMAEQLGATCSIELDPS------VTHV 424 (484)
Q Consensus 376 r~~vL~G~~IvfSG~~p~~~-------------------------~~~~~~l~~la~~lGA~v~~~i~~~------vTHl 424 (484)
.+.+|.|+.+++|+..+.+. ...+..|.++++++||.|..+++.. +|||
T Consensus 12 ~~~iF~g~~F~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~I~~~GG~v~~~~~~~~~~~~~~t~L 91 (259)
T 1kzy_C 12 NKTLFLGYAFLLTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAYQCLL 91 (259)
T ss_dssp STTTTTTEEEEECCCC---------------------------CCCCCHHHHHHHHHTTTCEECSSCCTTTTTTTCEEEE
T ss_pred CCcCcCCcEEEEEcccccccccccccccccccccccccccccccCcccHHHHHHHHHHCCCEEecCccccccccCCCeEE
Confidence 46799999999999866421 1356799999999999999998865 7999
Q ss_pred EEcC-CCChHHHHHHhcCCeeeChhhHHHHHHhcCCCCCCCCCCCC
Q 041302 425 VSTD-ARTEKSRWAAKEAKFLVDPRWIETANFLWQRQPEENFPVQQ 469 (484)
Q Consensus 425 Va~~-~~T~K~~~A~~~gi~IV~~~WL~~c~~~w~r~dE~~Y~l~~ 469 (484)
|+.. .+|.|+.+|+..|++||+++||.+|+...+.+|+.+|.+..
T Consensus 92 Ia~~~~rt~K~l~ala~g~~iVs~~Wl~dc~~~~~~l~~~~Y~l~~ 137 (259)
T 1kzy_C 92 IADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPA 137 (259)
T ss_dssp EESSCCCSHHHHHHHHHTCCEEETHHHHHHHHHTSCCCGGGSBCCC
T ss_pred EcCCCCCcHHHHHHHhcCCCCccHHHHHHHHHcCCcCCHHHccCCC
Confidence 9976 68999999999999999999999999999999999999964
No 30
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=99.13 E-value=6.2e-11 Score=99.23 Aligned_cols=76 Identities=16% Similarity=0.097 Sum_probs=70.0
Q ss_pred cccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhhHHHHHHh
Q 041302 377 GEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRWIETANFL 456 (484)
Q Consensus 377 ~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~WL~~c~~~ 456 (484)
..+|.|.+|||+|.++. .+..+..+++.+||.+..+++.++||||+....+.|+++|.++||+||+.+|+.+++..
T Consensus 5 ~~~l~G~~~v~TG~l~~----~R~e~~~~i~~~Gg~v~~sVskkt~~LV~g~~~gsK~~kA~~lgI~Ii~E~~f~~~l~~ 80 (92)
T 1l7b_A 5 GEALKGLTFVITGELSR----PREEVKALLRRLGAKVTDSVSRKTSYLVVGENPGSKLEKARALGVPTLTEEELYRLLEA 80 (92)
T ss_dssp CCSSTTCEEECSTTTTS----CHHHHHHHHHHTTCEEESCCSSSCCCBEECSSSSTTHHHHHCSSSCCEEHHHHHHHHHH
T ss_pred CCCcCCcEEEEecCCCC----CHHHHHHHHHHcCCEEeCcccCCeeEEEeCCCCChHHHHHHHcCCcEEeHHHHHHHHHh
Confidence 46799999999999864 47899999999999999999999999999988889999999999999999999998863
No 31
>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*
Probab=99.11 E-value=1.2e-10 Score=113.60 Aligned_cols=91 Identities=16% Similarity=0.086 Sum_probs=76.3
Q ss_pred ccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeee-----c--CC-------------------CccEEEEcCC-C
Q 041302 378 EVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIE-----L--DP-------------------SVTHVVSTDA-R 430 (484)
Q Consensus 378 ~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~-----i--~~-------------------~vTHlVa~~~-~ 430 (484)
.+|+||.|++||.. ......+..|.++++++||++..+ + .. ..||||+... .
T Consensus 1 ~lF~g~~F~ls~~~-~~~~~~k~~L~~~I~~~GG~v~~~g~~~lf~~~~~~~~~~~~~~k~~~~~~~~~~t~lia~~~~r 79 (241)
T 2vxb_A 1 LIFDDCVFAFSGPV-HEDAYDRSALETVVQDHGGLVLDTGLRPLFNDPFKSKQKKLRHLKPQKRSKSWNQAFVVSDTFSR 79 (241)
T ss_dssp CTTTTEEEEECCCS-STTSSCHHHHHHHHHHTTCEECTTCSGGGBCCSCC----CCCSCCBCGGGGGCSEEEEECSSCCC
T ss_pred CCCCCcEEEEecCC-CCchhhHHHHHHHHHHCCCEEecCcchhhccCccccccccccccccccccccccceEEEcCCCCC
Confidence 37999999999972 111236789999999999999886 2 11 2499999864 5
Q ss_pred ChHHHHHHhcCCeeeChhhHHHHHHhcCCCCCCCCCCCC
Q 041302 431 TEKSRWAAKEAKFLVDPRWIETANFLWQRQPEENFPVQQ 469 (484)
Q Consensus 431 T~K~~~A~~~gi~IV~~~WL~~c~~~w~r~dE~~Y~l~~ 469 (484)
|.|+.+|+..|++||+|+||.+|+...+.+|+.+|+|..
T Consensus 80 t~K~~~ala~gipiV~~~Wi~dc~~~~~~~~~~~ylL~~ 118 (241)
T 2vxb_A 80 KVKYLEALAFNIPCVHPQFIKQCLKMNRVVDFSPYLLAS 118 (241)
T ss_dssp CHHHHHHHHHTCCEECTHHHHHHHHHTSCCCSGGGBBEE
T ss_pred cHHHHHHHHcCCCEecHHHHHHHHHcCCcCChhhccCCC
Confidence 999999999999999999999999999999999999853
No 32
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=99.09 E-value=2.6e-10 Score=98.36 Aligned_cols=82 Identities=15% Similarity=0.075 Sum_probs=72.1
Q ss_pred hhhhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCC-hHHHHHHhcCCeeeChhhHH
Q 041302 373 KMVRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDART-EKSRWAAKEAKFLVDPRWIE 451 (484)
Q Consensus 373 ~~lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T-~K~~~A~~~gi~IV~~~WL~ 451 (484)
+.-...+|.|.+|||||.++.. .+..+..+++.+||.|...++.+|+|||+....+ .|+.+|.+.||+||+.+|+.
T Consensus 26 p~~~~~~l~G~~~v~TG~l~~~---~R~e~~~~i~~~Gg~v~~sVSkkTd~LV~G~~~g~sK~~kA~~lgI~Ii~E~~f~ 102 (109)
T 2k6g_A 26 PKGAENCLEGLIFVITGVLESI---ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLL 102 (109)
T ss_dssp CCCCTTTTTTCEEEEESBCSSC---CHHHHHHHHHHTTCEEESSCCTTCCEEEECBCCCHHHHHHHHHHTCEEECHHHHH
T ss_pred CCCCCCCCCCCEEEEeeeCCCC---CHHHHHHHHHHcCCEeeCcccCCceEEEECCCCChHHHHHHHHcCCeEEeHHHHH
Confidence 3445568999999999998643 5789999999999999999999999999997655 99999999999999999999
Q ss_pred HHHHhc
Q 041302 452 TANFLW 457 (484)
Q Consensus 452 ~c~~~w 457 (484)
+.+...
T Consensus 103 ~ll~~~ 108 (109)
T 2k6g_A 103 NLIRNL 108 (109)
T ss_dssp HHHHHT
T ss_pred HHHHhC
Confidence 988653
No 33
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=4.9e-10 Score=97.01 Aligned_cols=82 Identities=15% Similarity=0.098 Sum_probs=72.1
Q ss_pred HhhhhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCC-CChHHHHHHhcCCeeeChhhH
Q 041302 372 LKMVRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDA-RTEKSRWAAKEAKFLVDPRWI 450 (484)
Q Consensus 372 L~~lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~-~T~K~~~A~~~gi~IV~~~WL 450 (484)
++.-....|.|.+|||+|.++.. .+..+..+++.+||.|...++.+++|||+... ++.|+.+|.+.||+||+.+|+
T Consensus 15 ~P~~~~~~l~G~~~v~TG~l~~~---~R~e~~~~i~~~Ggkv~~sVSkkTd~LV~G~~~g~sKl~KA~~lgI~IisE~~f 91 (112)
T 2ebu_A 15 IPKGAENCLEGLIFVITGVLESI---ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGL 91 (112)
T ss_dssp CCCCCSSSSTTCEEEECSCCSSS---CHHHHHHHHHHTTCEECSSCCSSCCEEEECSSCCSHHHHHHHHHTCEEEEHHHH
T ss_pred CCCCCCCCcCCCEEEEeeeCCCC---CHHHHHHHHHHcCCEEeccccCCeeEEEecCCCChHHHHHHHHcCCeEEeHHHH
Confidence 33444568999999999998643 57899999999999999999999999999975 459999999999999999999
Q ss_pred HHHHHh
Q 041302 451 ETANFL 456 (484)
Q Consensus 451 ~~c~~~ 456 (484)
.+.+..
T Consensus 92 ~~ll~~ 97 (112)
T 2ebu_A 92 LNLIRT 97 (112)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999874
No 34
>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}
Probab=98.98 E-value=1.2e-10 Score=114.25 Aligned_cols=91 Identities=13% Similarity=0.119 Sum_probs=52.2
Q ss_pred hhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCC--h----HHHHHHhc--------
Q 041302 375 VRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDART--E----KSRWAAKE-------- 440 (484)
Q Consensus 375 lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T--~----K~~~A~~~-------- 440 (484)
....+|+||+++|+|..+.. ....+..++..+||++..+++..+||||+...+. . +++.....
T Consensus 156 ~~~~lF~g~~~yl~~~~~~~---~~~~l~~~i~~~GG~v~~~l~~~t~hVV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (264)
T 1z56_C 156 FPLFLFSNRIAYVPRRKIST---EDDIIEMKIKLFGGKITDQQSLCNLIIIPYTDPILRKDCMNEVHEKIKEQIKASDTI 232 (264)
T ss_dssp CCCC-----------------------CHHHHHHHTTSCCCCSSSCSEEECCCSSTTTHHHHSSHHHHTTTTTTTSSSSC
T ss_pred CchhhhCCeEEEEecCCCch---hHHHHHHHHHHcCCEEecccCCCEEEEEeCCCccchHHHHHHHHHHHHhhccccccc
Confidence 45779999999999974332 2345577899999999999997777887753331 2 23332221
Q ss_pred -CC-eeeChhhHHHHHHhcCCCCCCCCCCC
Q 041302 441 -AK-FLVDPRWIETANFLWQRQPEENFPVQ 468 (484)
Q Consensus 441 -gi-~IV~~~WL~~c~~~w~r~dE~~Y~l~ 468 (484)
++ +||+|+||++|+..++++||++|.+.
T Consensus 233 ~~~~~iV~~~Wv~dci~~~~ll~e~~Y~~~ 262 (264)
T 1z56_C 233 PKIARVVAPEWVDHSINENCQVPEEDFPVV 262 (264)
T ss_dssp CCCCEEECTHHHHHHHTTSCCCSSCCC---
T ss_pred CCCCEEecHHHHHHHHHcCCcCCHHHcCCC
Confidence 33 99999999999999999999999753
No 35
>2ep8_A Pescadillo homolog 1; A/B/A 3 layers, nucleolus, ribosome biogenesis, DNA damage, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.98 E-value=4.8e-10 Score=95.18 Aligned_cols=81 Identities=15% Similarity=0.268 Sum_probs=66.4
Q ss_pred hcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeee-----------cCCCccEEEEcCCCChHHHHHHhcCCee
Q 041302 376 RGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIE-----------LDPSVTHVVSTDARTEKSRWAAKEAKFL 444 (484)
Q Consensus 376 r~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~-----------i~~~vTHlVa~~~~T~K~~~A~~~gi~I 444 (484)
.+.+|+|+++++++-. .+..+..++.++||.+..+ .+..+||+|+-++...+ ...+..+
T Consensus 9 ~~~LF~g~~F~i~~e~------p~~~le~~I~~~GG~v~~~~~~~~g~~~~~~~~~iTh~I~drp~~~~----~~~~r~~ 78 (100)
T 2ep8_A 9 HKKLFEGLKFFLNREV------PREALAFIIRSFGGEVSWDKSLCIGATYDVTDSRITHQIVDRPGQQT----SVIGRCY 78 (100)
T ss_dssp SCCTTSSCEEECCSSS------CHHHHHHHHHHTTCEEECCTTTSSCCCSCTTCTTCCEEECSCTTTSC----CBTTBEE
T ss_pred hHHHcCCcEEEEecCC------CHHHHHHHHHHcCCEEEeccccccCcccccCCCceEEEEecccchhh----hcCCCeE
Confidence 4678999999998743 3568899999999999875 25799999998764322 2246689
Q ss_pred eChhhHHHHHHhcCCCCCCCCC
Q 041302 445 VDPRWIETANFLWQRQPEENFP 466 (484)
Q Consensus 445 V~~~WL~~c~~~w~r~dE~~Y~ 466 (484)
|.|+||+||+...+.+|+++|.
T Consensus 79 VqPqWV~Dcin~~~lLp~~~Y~ 100 (100)
T 2ep8_A 79 VQPQWVFDSVNARLLLPVAEYF 100 (100)
T ss_dssp ECTHHHHHHHHHTSCCCTTTCC
T ss_pred EcchHHHHHHhcCCcCChhhcC
Confidence 9999999999999999999994
No 36
>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A
Probab=98.95 E-value=1.8e-09 Score=93.62 Aligned_cols=85 Identities=9% Similarity=0.040 Sum_probs=73.0
Q ss_pred cccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcC---CCChHHHHHHhcCCeeeChhh----
Q 041302 377 GEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTD---ARTEKSRWAAKEAKFLVDPRW---- 449 (484)
Q Consensus 377 ~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~---~~T~K~~~A~~~gi~IV~~~W---- 449 (484)
..+|.|.+|||+|.++. .+..+..+++.+||+++..++.+|||||+.. ..+.|+.+|.+.||+||+.+|
T Consensus 8 ~~~l~G~~~ViTG~l~~----~R~e~k~~ie~~Ggkv~~sVskkT~~lV~g~~~e~~gsKl~kA~~lgI~IvsE~~l~~~ 83 (113)
T 2cok_A 8 DKPLSNMKILTLGKLSR----NKDEVKAMIEKLGGKLTGTANKASLCISTKKEVEKMNKKMEEVKEANIRVVSEDFLQDV 83 (113)
T ss_dssp CCSSSSCEEEECSCCSS----CHHHHHHHHHHTTCEEESCSTTCSEEECCHHHHHHCCHHHHHHHHTTCCEECTHHHHHH
T ss_pred CCCcCCCEEEEEecCCC----CHHHHHHHHHHCCCEEcCccccCccEEEECCCCCCCChHHHHHHHCCCcEEeHHHHHHH
Confidence 46799999999998753 4789999999999999999999999999994 367999999999999999999
Q ss_pred ------HHHHHHhcCCCCCCCC
Q 041302 450 ------IETANFLWQRQPEENF 465 (484)
Q Consensus 450 ------L~~c~~~w~r~dE~~Y 465 (484)
+.+|+......|....
T Consensus 84 ~~~~~~~~~~i~k~~i~~w~~~ 105 (113)
T 2cok_A 84 SASTKSLQELFLAHILSSWGAE 105 (113)
T ss_dssp HSCCSCHHHHHHHTBCSSCCCS
T ss_pred HhhchhHHHHHHHhcCCCCCCC
Confidence 5567777777666553
No 37
>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}
Probab=98.88 E-value=5e-10 Score=109.87 Aligned_cols=93 Identities=11% Similarity=0.037 Sum_probs=71.8
Q ss_pred hcccccceeeee-eeccCC--CCCcchHHHHHHHHHhCCeEeeecCCC-----ccEEEEcCCCChHHHHHHhcCCeeeCh
Q 041302 376 RGEVLKGCKLVF-SHVFPT--KFPADTHYLWKMAEQLGATCSIELDPS-----VTHVVSTDARTEKSRWAAKEAKFLVDP 447 (484)
Q Consensus 376 r~~vL~G~~Ivf-SG~~p~--~~~~~~~~l~~la~~lGA~v~~~i~~~-----vTHlVa~~~~T~K~~~A~~~gi~IV~~ 447 (484)
..++|+||+|++ +|.... +....+..|.+++.++||++..+.... +||+|+.+ .|.|++.+.+.|++||+|
T Consensus 2 ~s~lF~g~~f~v~~~~~~p~~~~~~~~~~L~~li~~~GG~~~~~~~~~t~~~~~~~iI~~~-~t~k~~~~~~~~~~vV~p 80 (264)
T 1z56_C 2 ISNIFAGLLFYVLSDYVTEDTGIRITRAELEKTIVEHGGKLIYNVILKRHSIGDVRLISCK-TTTECKALIDRGYDILHP 80 (264)
T ss_dssp -CCCCCTTCCCCSEEEECCCCCSSSSCCCTHHHHHHHHTTSCCCSSCCCCCSSCCEEEECS-CCGGGGGGTTTTCCCBCS
T ss_pred ccccCCCcEEEEEcCCCCccccccCCHHHHHHHHHHcCCEEeecCCCCccCccceEEEecC-CcHHHHHHHhCCCCEEec
Confidence 357999999976 775421 112356789999999999987644433 36777754 688988888888999999
Q ss_pred hhHHHHHHhcCCCCCCCCCCCC
Q 041302 448 RWIETANFLWQRQPEENFPVQQ 469 (484)
Q Consensus 448 ~WL~~c~~~w~r~dE~~Y~l~~ 469 (484)
+||.+|+..++.+|.++|.+-.
T Consensus 81 ~Wv~dci~~~~llp~~~y~~~~ 102 (264)
T 1z56_C 81 NWVLDCIAYKRLILIEPNYCFN 102 (264)
T ss_dssp STTHHHHSSCSCCCCCSCBSCC
T ss_pred hHHHHHhhcCCCCCCChHHhhc
Confidence 9999999999999999987643
No 38
>2coe_A Deoxynucleotidyltransferase, terminal variant; BRCT domain, DNA polymerase, teminal deoxynucleotidyltransferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.86 E-value=7.1e-09 Score=90.69 Aligned_cols=91 Identities=15% Similarity=0.094 Sum_probs=68.3
Q ss_pred cccccceeeeeeeccCCCCCc-chHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHh-------cCCeeeChh
Q 041302 377 GEVLKGCKLVFSHVFPTKFPA-DTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAK-------EAKFLVDPR 448 (484)
Q Consensus 377 ~~vL~G~~IvfSG~~p~~~~~-~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~-------~gi~IV~~~ 448 (484)
...|+||+|+|- |..... ...-+.+++..+||++.+.+++.|||||+.+...+.+..-++ .+.+||+..
T Consensus 18 ~~~F~g~~iy~v---~~~~g~~R~~~l~~l~r~~G~~V~~~ls~~VTHVVve~~~~~e~~~~l~~~~l~~~~~~~lv~i~ 94 (120)
T 2coe_A 18 DIKFQDLVVFIL---EKKMGTTRRALLMELARRKGFRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVS 94 (120)
T ss_dssp CCSCTTCEEEEE---CTTTCHHHHHHHHHHHHHHTCEECSSCCTTCCEEEESSCCHHHHHHHHHHCCCCCSSCCEEEEHH
T ss_pred ccccCCeEEEEe---ecccchHHHHHHHHHHHHcCCEEeeccCCCcCEEEecCCCHHHHHHHHhccccccccccEEeecH
Confidence 367999999993 333332 345557899999999999999999999997554333332222 257999999
Q ss_pred hHHHHHHhcCCCCCCCCCC-CCC
Q 041302 449 WIETANFLWQRQPEENFPV-QQT 470 (484)
Q Consensus 449 WL~~c~~~w~r~dE~~Y~l-~~~ 470 (484)
||++|+...+.+||+.|.. ..+
T Consensus 95 Wl~esmk~g~lv~ee~~~~l~~~ 117 (120)
T 2coe_A 95 WLIECIGAGKPVEMTGKHQLSGP 117 (120)
T ss_dssp HHHHHHHTTSCCCCSSSSBCCCS
T ss_pred HHHHHHHcCCccCcccceEeccC
Confidence 9999999999999966654 443
No 39
>3pc7_A DNA ligase 3; DNA repair, BRCT domain, protein:protein interactions, XRCC1 domain, DNA binding protein; HET: DNA MSE; 1.65A {Homo sapiens} SCOP: c.15.1.2 PDB: 3pc8_C* 1imo_A* 1in1_A* 3qvg_A*
Probab=98.78 E-value=4.5e-09 Score=87.04 Aligned_cols=75 Identities=21% Similarity=0.256 Sum_probs=61.8
Q ss_pred hhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecC-CCccEEEEcCCCChHHHHHHhcCCeeeChhhHHHH
Q 041302 375 VRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELD-PSVTHVVSTDARTEKSRWAAKEAKFLVDPRWIETA 453 (484)
Q Consensus 375 lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~-~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~WL~~c 453 (484)
.-..+|.||++++.+-+|. ...+.+.+.++||.+..+.+ .++||+|+.+. ...+.++|+|+||++|
T Consensus 12 ~LpdiFsg~~~~l~~~v~~-----~~~l~RyiiAfgG~v~~~~~~~~vTHvI~~~~--------~~~~~~~V~p~WI~dc 78 (88)
T 3pc7_A 12 VLLDIFTGVRLYLPPSTPD-----FSRLRRYFVAFDGDLVQEFDMTSATHVLGSRD--------KNPAAQQVSPEWIWAC 78 (88)
T ss_dssp CCCCCSTTCEECCCTTSTT-----HHHHHHHHHHTTCEECCGGGGGGCSEEESCCT--------TCTTSEEECHHHHHHH
T ss_pred cCChhhcCeEEEccCCcCc-----hhhheeeeeecCCEEecccCCCcCeEEecCCC--------cCCCCcEEchHHHHHH
Confidence 3467899999999775542 35888999999999988777 49999998763 2468899999999999
Q ss_pred HHhcCCCCC
Q 041302 454 NFLWQRQPE 462 (484)
Q Consensus 454 ~~~w~r~dE 462 (484)
+.+.+.+++
T Consensus 79 I~k~~Ll~~ 87 (88)
T 3pc7_A 79 IRKRRLVAP 87 (88)
T ss_dssp HHHTSCCSC
T ss_pred HhCCcccCC
Confidence 999999875
No 40
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=98.71 E-value=1.4e-08 Score=97.15 Aligned_cols=93 Identities=15% Similarity=0.167 Sum_probs=63.6
Q ss_pred hcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCC-----CccEEEEcCCC----ChHHHH-HHhcCCeee
Q 041302 376 RGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDP-----SVTHVVSTDAR----TEKSRW-AAKEAKFLV 445 (484)
Q Consensus 376 r~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~-----~vTHlVa~~~~----T~K~~~-A~~~gi~IV 445 (484)
+..+|.|+.|+|.|.+. .+.+..+..+++..||++...... .+||+|+.... ..+++. |.+.|++||
T Consensus 114 ~~~lF~g~~~~~~~~~~---~~~~~~l~~li~~~GG~v~~~~~~~~~~~~~~~~vvv~~~~~~~~~~~~~l~~~~~i~iV 190 (229)
T 1l0b_A 114 QEKLFEGLQIYCCEPFT---NMPKDELERMLQLCGASVVKELPLLTRDTGAHPIVLVQPSAWTEDNDCPDIGQLCKGRLV 190 (229)
T ss_dssp C--CCTTCEEEECSCCS---SSCHHHHHHHHHHTTCEEECSSSCGGGCCSSCCEEEEC-------------------CEE
T ss_pred hhhhhcCceEEEEecCC---CCCHHHHHHHHHHCCCEEeCCcccccccCCCceEEEEcCCccchhhhHHHHHHHcCCeEe
Confidence 46899999999987543 245789999999999999988865 36886665432 345543 345789999
Q ss_pred ChhhHHHHHHhcCCCCCCCCCCCCCC
Q 041302 446 DPRWIETANFLWQRQPEENFPVQQTK 471 (484)
Q Consensus 446 ~~~WL~~c~~~w~r~dE~~Y~l~~~~ 471 (484)
+++||.+|+..++.+++++|.+...+
T Consensus 191 s~~WlldsI~~~~~~~~~~Y~l~~~~ 216 (229)
T 1l0b_A 191 MWDWVLDSISVYRCRDLDAYLVQNIT 216 (229)
T ss_dssp ETHHHHHHHHTTSCCCGGGGBCC---
T ss_pred ehhHHHHHHhcCCcCCccceEccccc
Confidence 99999999999999999999987554
No 41
>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A
Probab=98.67 E-value=1.6e-08 Score=95.41 Aligned_cols=92 Identities=18% Similarity=0.220 Sum_probs=71.1
Q ss_pred hhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCC----ccE-EEEcCCCC----hHHH-HHHhcCCee
Q 041302 375 VRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPS----VTH-VVSTDART----EKSR-WAAKEAKFL 444 (484)
Q Consensus 375 lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~----vTH-lVa~~~~T----~K~~-~A~~~gi~I 444 (484)
.+.++|+|+.|+|+|-+. .+.+..+..+++.+||++..++... .+| +|+..+.. .|++ .|.+.|++|
T Consensus 111 ~~~~lF~g~~~~~~~~~~---~~~~~~l~~li~~~GG~v~~~~~~~~~~~~~~~ivi~~~~~~~~~~~~~~~a~~~~~~i 187 (214)
T 1t15_A 111 QDRKIFRGLEICCYGPFT---NMPTDQLEWMVQLCGASVVKELSSFTLGTGVHPIVVVQPDAWTEDNGFHAIGQMCEAPV 187 (214)
T ss_dssp TTSCTTTTCEEEECSCCS---SSCHHHHHHHHHHTTCEECCSGGGCCCSTTCCEEEEECGGGCSSCGGGGSSTTTCSSCE
T ss_pred CCCcccCCCEEEEEecCC---CCCHHHHHHHHHHCCCEEecCccccccCCCCccEEEECCCcccchhhHHHHHHhcCCcE
Confidence 356899999999988553 2457899999999999999887642 234 55554321 2443 355679999
Q ss_pred eChhhHHHHHHhcCCCCCCCCCCCC
Q 041302 445 VDPRWIETANFLWQRQPEENFPVQQ 469 (484)
Q Consensus 445 V~~~WL~~c~~~w~r~dE~~Y~l~~ 469 (484)
|+++||.+|+.+++.+|+++|.+..
T Consensus 188 V~~~Wi~dsi~~~~~l~~~~Y~l~~ 212 (214)
T 1t15_A 188 VTREWVLDSVALYQCQELDTYLIPQ 212 (214)
T ss_dssp EEHHHHHHHHHHTSCCCSGGGBCCC
T ss_pred EeccHHHHhHhhcCcCCCcceeecc
Confidence 9999999999999999999998864
No 42
>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*
Probab=98.49 E-value=8.1e-08 Score=90.83 Aligned_cols=83 Identities=13% Similarity=0.158 Sum_probs=65.7
Q ss_pred hhcccccceee-eeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhhHHHH
Q 041302 375 VRGEVLKGCKL-VFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRWIETA 453 (484)
Q Consensus 375 lr~~vL~G~~I-vfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~WL~~c 453 (484)
.+.++|+|+.+ ++++. ..|.+..+..+++..||+|..++. .++++|+.... +...++++|+|+||.||
T Consensus 115 ~~~~LF~g~~~~~v~~~----~~~~~~~L~~lI~~~GG~v~~~~~-~~~iiI~~~~~------~~~~~~~~V~p~Wi~Ds 183 (199)
T 3u3z_A 115 YRGTLFADQPVMFVSPA----SSPPVAKLCELVHLCGGRVSQVPR-QASIVIGPYSG------KKKATVKYLSEKWVLDS 183 (199)
T ss_dssp CCCCTTTTSCCEEECTT----CSSCHHHHHHHHHHTTCCBCSSGG-GCSEEESCCCS------CCCTTCEEECHHHHHHH
T ss_pred ccchhhCCCeEEEECCC----CCCCHHHHHHHHHHcCCEEeccCC-CCEEEEeCCch------hccCCCcEEChhHHHHH
Confidence 36799999964 44543 244578999999999999999885 56666654322 24578999999999999
Q ss_pred HHhcCCCCCCCCCCC
Q 041302 454 NFLWQRQPEENFPVQ 468 (484)
Q Consensus 454 ~~~w~r~dE~~Y~l~ 468 (484)
+.+.+.+|.++|.+.
T Consensus 184 I~~~~llp~~~Y~~~ 198 (199)
T 3u3z_A 184 ITQHKVCAPENYLLS 198 (199)
T ss_dssp HHHTSCCCGGGGBCC
T ss_pred HHcCCcCChHhccCC
Confidence 999999999999875
No 43
>2dun_A POL MU, DNA polymerase MU; layers A/B/A, parallel beta-sheet of 4 strands, non- homologous END jonting, somatic hypermutation, V(D)J recombination; HET: DNA; NMR {Homo sapiens} PDB: 2htf_A*
Probab=98.45 E-value=2.6e-07 Score=81.67 Aligned_cols=87 Identities=20% Similarity=0.247 Sum_probs=66.0
Q ss_pred ccccceeeeeeeccCCCC-CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHH-HH------H---hcCCeeeC
Q 041302 378 EVLKGCKLVFSHVFPTKF-PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSR-WA------A---KEAKFLVD 446 (484)
Q Consensus 378 ~vL~G~~IvfSG~~p~~~-~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~-~A------~---~~gi~IV~ 446 (484)
..|.|++|++=. ... ...+.-|.++|.+.|+++.+.+++.|||+|+.+...+-+. |- + ..+.++|+
T Consensus 9 ~~F~~v~iyive---~kmG~sRr~fL~~la~~kGf~v~~~~S~~VTHVV~E~~s~~~~~~~L~~~~~~l~~~~~~~~lLd 85 (133)
T 2dun_A 9 TRFPGVAIYLVE---PRMGRSRRAFLTGLARSKGFRVLDACSSEATHVVMEETSAEEAVSWQERRMAAAPPGCTPPALLD 85 (133)
T ss_dssp CSEEEEEEEECH---HHHCSHHHHHHHHHHHHHTEEECSSCCTTCCEEEESSCCHHHHHHHHHHHHHHSCTTCCCCEEEE
T ss_pred cccCccEEEEec---CCcCHHHHHHHHHHHHhcCCEeccccCCCceEEEecCCCHHHHHHHHHHhhcccCcCCCCcEEec
Confidence 458999998854 233 2345677899999999999999999999999654433222 11 1 14679999
Q ss_pred hhhHHHHHHhcCCCCCCCCCC
Q 041302 447 PRWIETANFLWQRQPEENFPV 467 (484)
Q Consensus 447 ~~WL~~c~~~w~r~dE~~Y~l 467 (484)
..||.+|+...+.+|++.|.+
T Consensus 86 isWltecm~~g~pV~~e~~~~ 106 (133)
T 2dun_A 86 ISWLTESLGAGQPVPVECRHR 106 (133)
T ss_dssp HHHHHHHHHHTSCCCCCTTTS
T ss_pred cHHHHHHHhcCCcCCcccceE
Confidence 999999999999999965543
No 44
>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A
Probab=98.35 E-value=8.6e-07 Score=84.11 Aligned_cols=92 Identities=15% Similarity=0.136 Sum_probs=72.5
Q ss_pred hcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCC--ccEEEEcC-CCChHHHHHHhcCCeeeChhhHHH
Q 041302 376 RGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPS--VTHVVSTD-ARTEKSRWAAKEAKFLVDPRWIET 452 (484)
Q Consensus 376 r~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~--vTHlVa~~-~~T~K~~~A~~~gi~IV~~~WL~~ 452 (484)
+.++|+|+.|++++.. .+....+..+++..||++.....+. .+|+|... ....+++.+.+.|++||+++||.+
T Consensus 112 ~~~lF~g~~~~~~~~~----~~~~~~l~~li~~~GG~v~~~~~~~~~~~~ivI~~~~d~~~~~~~~~~~i~vvs~eWi~~ 187 (209)
T 2etx_A 112 ERRLLEGYEIYVTPGV----QPPPPQMGEIISCCGGTYLPSMPRSYKPQRVVITCPQDFPHCSIPLRVGLPLLSPEFLLT 187 (209)
T ss_dssp HSCTTTTCEEEECTTC----SSCHHHHHHHHHHTTCEECSSCCCSCCTTEEEECCGGGGGGCHHHHHHTCCEECTHHHHH
T ss_pred hCCCcCCcEEEEeCCC----CCCHHHHHHHHHHCCCEEECCCCCCCCCceEEEECcccHHHHHHHHHCCCeEEcHHHHHH
Confidence 3589999999998753 3456789999999999999877653 26777753 334566778888999999999999
Q ss_pred HHHhcCCCCCCCCCCCCCCC
Q 041302 453 ANFLWQRQPEENFPVQQTKP 472 (484)
Q Consensus 453 c~~~w~r~dE~~Y~l~~~~~ 472 (484)
|+.+ ..++++.|.+..+.+
T Consensus 188 sI~~-q~ld~e~y~l~~~~~ 206 (209)
T 2etx_A 188 GVLK-QEAKPEAFVLSPLEM 206 (209)
T ss_dssp HHHH-TCCCGGGGBCCTTC-
T ss_pred HHHh-cccChHHheecCCCc
Confidence 9998 457999999876554
No 45
>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B
Probab=98.29 E-value=1.2e-06 Score=86.07 Aligned_cols=88 Identities=16% Similarity=0.121 Sum_probs=67.5
Q ss_pred hcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecC---------CCccEEEEcCCC--ChHHHHHHhcCCee
Q 041302 376 RGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELD---------PSVTHVVSTDAR--TEKSRWAAKEAKFL 444 (484)
Q Consensus 376 r~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~---------~~vTHlVa~~~~--T~K~~~A~~~gi~I 444 (484)
+.++|+|+.|++++....+ ....+..+++.+||++..... ...+|+|..+.. ..+.+.|.++|++|
T Consensus 152 ~~~LF~G~~I~i~~~~~~~---~~~~~~~Il~~~Ga~vv~~~~s~~~~~d~~~~~~~viv~d~~~~~~~~~~a~~~~i~i 228 (259)
T 1kzy_C 152 RENPFQNLKVLLVSDQQQN---FLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCPASVLKCAEALQLPV 228 (259)
T ss_dssp CCCTTTTCEEEEEESCTTT---THHHHHHHHHHTTCSEEEEEESSSSCCCSCGGGCSEEEECTTCCHHHHHHHHHHTCCE
T ss_pred cCCCCCCeEEEEecCCCCC---HHHHHHHHHHhcCCEEEeccccchhhhhccCCCCeEEEECCCChHHHHHHHHhcCCCE
Confidence 5789999999998864222 234455689999999887663 246777776432 35666788899999
Q ss_pred eChhhHHHHHHhcCCCCCCCCC
Q 041302 445 VDPRWIETANFLWQRQPEENFP 466 (484)
Q Consensus 445 V~~~WL~~c~~~w~r~dE~~Y~ 466 (484)
|+.+||.+|+...+.+|+..++
T Consensus 229 Vs~EWv~~sI~~~~ll~~~~hp 250 (259)
T 1kzy_C 229 VSQEWVIQCLIVGERIGFKQHP 250 (259)
T ss_dssp ECHHHHHHHHHHTSCCCTTSSG
T ss_pred ecHHHHHHHHHhCCcCCCCcCc
Confidence 9999999999999999988764
No 46
>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A
Probab=98.20 E-value=7.7e-07 Score=84.15 Aligned_cols=86 Identities=10% Similarity=0.157 Sum_probs=65.3
Q ss_pred hhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeec-----------------------CCCccEEEEcCCCC
Q 041302 375 VRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIEL-----------------------DPSVTHVVSTDART 431 (484)
Q Consensus 375 lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i-----------------------~~~vTHlVa~~~~T 431 (484)
.+.++|.|+.|+|+|-+. .+.+..+..+++..||++.... ++.+||+|..+++.
T Consensus 100 ~~~~lF~g~~~~l~~~~~---~~~~~~l~~lI~~~GG~v~~~~p~~~~~~~~~~~~v~~~~~~~~~~~~~t~~iv~~~~~ 176 (210)
T 2nte_A 100 LLPKLFDGCYFYLWGTFK---HHPKDNLIKLVTAGGGQILSRKPKPDSDVTQTINTVAYHARPDSDQRFCTQYIIYEDLC 176 (210)
T ss_dssp TCCCTTTTCEEEECSCCS---SSCHHHHHHHHHHTTCEEESSCCCGGGCGGGSSCCCCTTSCTTCGGGTCCEEEEECSCS
T ss_pred ccccccCceEEEEeccCC---CCCHHHHHHHHHHCCCEEEecCCCCccccccccceeeeccCCCcccccceEEEEecccc
Confidence 357899999999998542 3467899999999999998521 14569999987642
Q ss_pred hH-HHHHHhcCCeeeChhhHHHHHHhcCCCCCC
Q 041302 432 EK-SRWAAKEAKFLVDPRWIETANFLWQRQPEE 463 (484)
Q Consensus 432 ~K-~~~A~~~gi~IV~~~WL~~c~~~w~r~dE~ 463 (484)
.. ...|...++++|+++||++|+..++.+|.+
T Consensus 177 ~~~~~~~~~~~v~~V~~~Wl~dcI~~~~llp~~ 209 (210)
T 2nte_A 177 NYHPERVRQGKVWKAPSSWFIDCVMSFELLPLD 209 (210)
T ss_dssp SCCCSCSEETTEEEEEHHHHHHHHHHTSCCCSC
T ss_pred ccCHHHHhccCcccccHHHHHHHHHhCeeccCC
Confidence 11 122344678999999999999999998864
No 47
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=97.86 E-value=2.1e-05 Score=71.88 Aligned_cols=140 Identities=19% Similarity=0.169 Sum_probs=78.4
Q ss_pred CCcccCHHHHHHHHhhhhhhhhhcCccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEe
Q 041302 138 KGLRLGNDEIDRLRNTDMKHLLRHRKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKL 217 (484)
Q Consensus 138 ~~l~vs~~ea~~~~~~~~~~ll~~rKL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vkl 217 (484)
.|+..+...+.. + ........+++|||+||+.........+. ..... ....+ ....-.+.+
T Consensus 9 ~~~~~~~~~~~~---~----~m~~~~k~vifDlDGTL~~~~~~~~~~~~---------~~~~~-~~~~~--~~~~~~~~~ 69 (187)
T 2wm8_A 9 SGVDLGTENLYF---Q----SMARLPKLAVFDLDYTLWPFWVDTHVDPP---------FHKSS-DGTVR--DRRGQDVRL 69 (187)
T ss_dssp -----CHHHHHH---H----HHHTSCSEEEECSBTTTBSSCTTTSSCSC---------CEECT-TSCEE--CTTCCEECC
T ss_pred ccccCCCchhHH---H----HHHhccCEEEEcCCCCcchHHHhhccCcc---------hhhhc-ccchh--hccCcccCc
Confidence 466666654432 1 12234568999999999744321111100 00000 00000 011224678
Q ss_pred cccHHHHHHHhhhC-CeEEEecCCc-HhHHHHHHhhhCCCCcccceeEEeecCCCCCccccccccCCCCCcEEEEcCChh
Q 041302 218 RPFVHTFLKEASEM-FEMYIYTMGD-RPYALEMAKLLDPSREYFNARVISRDDGTQRHQKGLDVVLGQESAVLILDDTEN 295 (484)
Q Consensus 218 RPgl~eFL~~ls~~-yEl~IyT~g~-r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~~~KdL~~l~~~~~~vVIIDD~~~ 295 (484)
.||+.++|+.+.+. +.++|.|++. +.++..+++.++-.. +|..-++........+.+-++.+..+.+.+++|+|++.
T Consensus 70 ~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~ 148 (187)
T 2wm8_A 70 YPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFR-YFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDERR 148 (187)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTT-TEEEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCHH
T ss_pred chhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHh-hcceeEEEeCchHHHHHHHHHHcCCChHHEEEEeCCcc
Confidence 99999999999765 9999999999 799999999987765 67542221111011122334444456778999999865
Q ss_pred hh
Q 041302 296 AW 297 (484)
Q Consensus 296 vw 297 (484)
-.
T Consensus 149 Di 150 (187)
T 2wm8_A 149 NI 150 (187)
T ss_dssp HH
T ss_pred Ch
Confidence 43
No 48
>2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli}
Probab=97.86 E-value=2e-06 Score=94.68 Aligned_cols=74 Identities=14% Similarity=0.058 Sum_probs=0.0
Q ss_pred ccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhhHHHHH
Q 041302 378 EVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRWIETAN 454 (484)
Q Consensus 378 ~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~WL~~c~ 454 (484)
..|.|.+|||||.++.. .+..+..+++.+||+++.+++++|++||++...+.|..+|.+.||+|++.+|+.+.+
T Consensus 596 ~~l~G~~~v~TG~l~~~---~R~e~~~~i~~~Ggkv~~sVSkkTd~lV~G~~~gsKl~KA~~lgI~Ii~E~~f~~~l 669 (671)
T 2owo_A 596 SPFAGKTVVLTGSLSQM---SRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 (671)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred CcccCcEEEEcCCCCCC---CHHHHHHHHHHcCCEEeCcccCceeEEEECCCCChHHHHHHHCCCcEEcHHHHHHHh
Confidence 46999999999998643 467889999999999999999999999999887899999999999999999998875
No 49
>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*
Probab=97.85 E-value=2.1e-06 Score=94.51 Aligned_cols=75 Identities=12% Similarity=0.054 Sum_probs=0.0
Q ss_pred ccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhhHHHHHHh
Q 041302 378 EVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRWIETANFL 456 (484)
Q Consensus 378 ~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~WL~~c~~~ 456 (484)
..|.|.+|||||.++. .+..+..+++.+||+++.+++++|++||++...+.|..+|.+.||+|++.+|+.+.+..
T Consensus 586 ~~l~G~~~v~TG~l~~----~R~e~~~~i~~~Ggkv~~sVSkkTd~lV~G~~~gsKl~KA~~lgI~Ii~E~~f~~~l~~ 660 (667)
T 1dgs_A 586 DLLSGLTFVLTGELSR----PREEVKALLGRLGAKVTDSVSRKTSYLVVGENPGSKLEKARALGVAVLTEEEFWRFLKE 660 (667)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred cccCCCEEEEeCCCCC----CHHHHHHHHHHcCCEEcCcccCCeeEEEECCCCChHHHHHHHCCCeEEeHHHHHHHHhc
Confidence 4699999999999865 36788999999999999999999999999988779999999999999999999998764
No 50
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=97.78 E-value=5.6e-05 Score=68.93 Aligned_cols=109 Identities=15% Similarity=0.160 Sum_probs=69.4
Q ss_pred hhcCccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhhC-CeEEEe
Q 041302 159 LRHRKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASEM-FEMYIY 237 (484)
Q Consensus 159 l~~rKL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~~-yEl~Iy 237 (484)
..+...++++|+|+||+..... .... . ..-.+++.||+.++|+.|.+. |.+.|.
T Consensus 10 ~~~~~k~~~~D~Dgtl~~~~~~-~~~~-------------~-----------~~~~~~~~pg~~e~L~~L~~~G~~l~i~ 64 (176)
T 2fpr_A 10 HGSSQKYLFIDRDGTLISEPPS-DFQV-------------D-----------RFDKLAFEPGVIPQLLKLQKAGYKLVMI 64 (176)
T ss_dssp ---CCEEEEECSBTTTBCCC---CCCC-------------C-----------SGGGCCBCTTHHHHHHHHHHTTEEEEEE
T ss_pred cCCcCcEEEEeCCCCeEcCCCC-CcCc-------------C-----------CHHHCcCCccHHHHHHHHHHCCCEEEEE
Confidence 4567889999999999977420 0000 0 001256889999999999875 999999
Q ss_pred cCC---------------cHhHHHHHHhhhCCCCcccceeEEe----ecCCCC--C----ccccccccCCCCCcEEEEcC
Q 041302 238 TMG---------------DRPYALEMAKLLDPSREYFNARVIS----RDDGTQ--R----HQKGLDVVLGQESAVLILDD 292 (484)
Q Consensus 238 T~g---------------~r~YA~~I~~~LDP~~~~F~~RI~s----Rd~c~~--~----~~KdL~~l~~~~~~vVIIDD 292 (484)
|++ .+.++..+++.+.-. |..-++| .+++.. + +.+-++.+.-+.+.+|+|+|
T Consensus 65 Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD 141 (176)
T 2fpr_A 65 TNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGD 141 (176)
T ss_dssp EECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGCCSSSTTSCGGGGGGC----CCGGGCEEEES
T ss_pred ECCccccccccchHhhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCcccccccCCCHHHHHHHHHHcCCCHHHEEEEcC
Confidence 999 678888888887654 6443345 244321 1 23334444446678999999
Q ss_pred Chh
Q 041302 293 TEN 295 (484)
Q Consensus 293 ~~~ 295 (484)
++.
T Consensus 142 ~~~ 144 (176)
T 2fpr_A 142 RAT 144 (176)
T ss_dssp SHH
T ss_pred CHH
Confidence 874
No 51
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=97.69 E-value=0.0001 Score=70.53 Aligned_cols=87 Identities=10% Similarity=0.028 Sum_probs=68.8
Q ss_pred hcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecCC-------------CccEEEEcCCCChHHHHHHhcCC
Q 041302 376 RGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELDP-------------SVTHVVSTDARTEKSRWAAKEAK 442 (484)
Q Consensus 376 r~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~~-------------~vTHlVa~~~~T~K~~~A~~~gi 442 (484)
+.++|+|+.|++++-+ .|....+..+++..||++...+.. ..+.||+.......++.+.+.|+
T Consensus 119 ~~~LF~G~~f~it~~~----~~~~~~l~~lI~~~GG~v~~~~p~~~~~~~~~~~~~~~~~ivis~~~d~~~~~~~~~~~~ 194 (219)
T 3sqd_A 119 VSPLFKAKYFYITPGI----CPSLSTMKAIVECAGGKVLSKQPSFRKLMEHKQNSSLSEIILISCENDLHLCREYFARGI 194 (219)
T ss_dssp HSCTTTTEEEEECTTC----SSCHHHHHHHHHHTTCEEESSCCCHHHHHHHHHCTTSCEEEEEECGGGGGGGHHHHHTTC
T ss_pred cccccCCcEEEEeCCC----CCCHHHHHHHHHHCCCEEECCCCchHHhhhhhcccCCCCEEEEecccHHHHHHHHHHCCC
Confidence 6789999999999854 344679999999999999987642 22455656566777888888999
Q ss_pred eeeChhhHHHHHHhcCCCCCCCCCC
Q 041302 443 FLVDPRWIETANFLWQRQPEENFPV 467 (484)
Q Consensus 443 ~IV~~~WL~~c~~~w~r~dE~~Y~l 467 (484)
.|++++||..|+.+ ++++-+.|.+
T Consensus 195 ~v~s~E~il~~Il~-q~ld~~~~~~ 218 (219)
T 3sqd_A 195 DVHNAEFVLTGVLT-QTLDYESYKF 218 (219)
T ss_dssp CCEETHHHHHHHHH-TCCCTTTSBC
T ss_pred cEEeHHHHHHHHHh-eeecchhccc
Confidence 99999999999995 4557677765
No 52
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=97.61 E-value=6.7e-05 Score=68.73 Aligned_cols=82 Identities=11% Similarity=0.171 Sum_probs=61.1
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcH---hHHHHHHhhhCCCCcccceeEEeecCC------CCC----cccccccc
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDR---PYALEMAKLLDPSREYFNARVISRDDG------TQR----HQKGLDVV 280 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r---~YA~~I~~~LDP~~~~F~~RI~sRd~c------~~~----~~KdL~~l 280 (484)
+.+.||+.++|+.|.+. |.+.|.|++.. .++..+++.+.-.. +|. .+++.++. .++ +.+-++++
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~-~fd-~i~~~~~~~~~~~~~KP~p~~~~~~~~~~ 110 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIID-YFD-FIYASNSELQPGKMEKPDKTIFDFTLNAL 110 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGG-GEE-EEEECCTTSSTTCCCTTSHHHHHHHHHHH
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchh-heE-EEEEccccccccCCCCcCHHHHHHHHHHc
Confidence 66899999999999876 99999999987 88999998887765 785 57766653 121 22334445
Q ss_pred CCCCCcEEEEcCC--hhhhh
Q 041302 281 LGQESAVLILDDT--ENAWT 298 (484)
Q Consensus 281 ~~~~~~vVIIDD~--~~vw~ 298 (484)
..+.+.+|+|+|+ .++-.
T Consensus 111 ~~~~~~~l~VGD~~~~Di~~ 130 (189)
T 3ib6_A 111 QIDKTEAVMVGNTFESDIIG 130 (189)
T ss_dssp TCCGGGEEEEESBTTTTHHH
T ss_pred CCCcccEEEECCCcHHHHHH
Confidence 5577889999999 34443
No 53
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=97.60 E-value=1.8e-05 Score=67.31 Aligned_cols=79 Identities=11% Similarity=0.053 Sum_probs=56.6
Q ss_pred ecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCC--CC----ccccccccCCCCCcEEE
Q 041302 217 LRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGT--QR----HQKGLDVVLGQESAVLI 289 (484)
Q Consensus 217 lRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~--~~----~~KdL~~l~~~~~~vVI 289 (484)
+.||+.++|+.+.+. +.++|.|++...++..+++.+.-.. +|. .+++.+++. ++ +.+-++.+..+.+.+++
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~-~f~-~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 96 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNG-VVD-KVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVL 96 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTT-SSS-EEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHh-hcc-EEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 468999999999875 9999999999999999998876544 674 466554432 11 22223344446678999
Q ss_pred EcCChhhh
Q 041302 290 LDDTENAW 297 (484)
Q Consensus 290 IDD~~~vw 297 (484)
|+|++.-.
T Consensus 97 vgD~~~di 104 (137)
T 2pr7_A 97 VDDSILNV 104 (137)
T ss_dssp EESCHHHH
T ss_pred EcCCHHHH
Confidence 99987644
No 54
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=97.57 E-value=5e-05 Score=69.33 Aligned_cols=84 Identities=17% Similarity=0.153 Sum_probs=61.6
Q ss_pred EEEEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccc-eeEEeecCCCC-C----ccccccccCCCCC
Q 041302 213 MMTKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFN-ARVISRDDGTQ-R----HQKGLDVVLGQES 285 (484)
Q Consensus 213 ~~vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~-~RI~sRd~c~~-~----~~KdL~~l~~~~~ 285 (484)
..+.+.||+.++|+.+.+. |.++|+|++.+.++..+++.+.-.. +|. ..+++.+.... + +.+-++.+.-+.+
T Consensus 67 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~ 145 (205)
T 3m9l_A 67 QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLAD-CFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPS 145 (205)
T ss_dssp EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGG
T ss_pred hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchh-hcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHH
Confidence 4578999999999999876 9999999999999999999887654 673 35776655211 1 1222333444678
Q ss_pred cEEEEcCChhhh
Q 041302 286 AVLILDDTENAW 297 (484)
Q Consensus 286 ~vVIIDD~~~vw 297 (484)
.++.|+|+..-.
T Consensus 146 ~~i~iGD~~~Di 157 (205)
T 3m9l_A 146 RMVMVGDYRFDL 157 (205)
T ss_dssp GEEEEESSHHHH
T ss_pred HEEEECCCHHHH
Confidence 899999987533
No 55
>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*
Probab=97.55 E-value=8.6e-05 Score=72.07 Aligned_cols=83 Identities=18% Similarity=0.079 Sum_probs=60.6
Q ss_pred hhcccccceeeeeeeccCC-C--------CCcchHHHHHHHHHhCCeE--eeecCCCccEEEEcCCCChHHHHHHhcCCe
Q 041302 375 VRGEVLKGCKLVFSHVFPT-K--------FPADTHYLWKMAEQLGATC--SIELDPSVTHVVSTDARTEKSRWAAKEAKF 443 (484)
Q Consensus 375 lr~~vL~G~~IvfSG~~p~-~--------~~~~~~~l~~la~~lGA~v--~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~ 443 (484)
-|.++|.|++|+|.+-... . ..+....+..+++.+||.+ .++++...+|+|....+. .|.+.+++
T Consensus 147 ~~~~Lf~g~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~Ga~~~~v~~~~~~~~d~v~~~~~~----~~~~~~~~ 222 (241)
T 2vxb_A 147 ARKGPLFGKKILFIIPEAKSWQKKIENTEQGQKALAHVYHALALGADVEIRPNVAHLECDLILTMDGN----IVDETNCP 222 (241)
T ss_dssp HCCCTTTTCEEEECCCC------------CHHHHHHHHHHHHHTTCEEECCSCCSSCCCSEEECSSSC----CCSSCSSC
T ss_pred hcCcCCCCcEEEEEeCCCcccccccccccccchHHHHHHHHHHcCCceecccccccCCccEEEECCcc----ccccCCCC
Confidence 4788999999988632100 0 0001245677899999999 556666788999986543 25668999
Q ss_pred eeChhhHHHHHHhcCCCC
Q 041302 444 LVDPRWIETANFLWQRQP 461 (484)
Q Consensus 444 IV~~~WL~~c~~~w~r~d 461 (484)
||+++||.+|+...++++
T Consensus 223 iV~~eWv~~~i~~g~~l~ 240 (241)
T 2vxb_A 223 VVDPEWIVECLISQSDIS 240 (241)
T ss_dssp EECHHHHHHHHHHTSCTT
T ss_pred EecHHHHHHHHHhceecC
Confidence 999999999999999886
No 56
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=97.54 E-value=0.00019 Score=64.52 Aligned_cols=102 Identities=10% Similarity=-0.034 Sum_probs=66.9
Q ss_pred cEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhhC-CeEEEecCCcH
Q 041302 164 LYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASEM-FEMYIYTMGDR 242 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~~-yEl~IyT~g~r 242 (484)
..+++|+|+||+.... .... . .-.+++.||+.++|+.|.+. |.+.|.|++.+
T Consensus 2 k~v~~D~DGtL~~~~~--~~~~-------------~------------~~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 2 KLIILDRDGVVNQDSD--AFVK-------------S------------PDEWIALPGSLQAIARLTQADWTVVLATNQSG 54 (179)
T ss_dssp CEEEECSBTTTBCCCT--TCCC-------------S------------GGGCCBCTTHHHHHHHHHHTTCEEEEEEECTT
T ss_pred CEEEEcCCCccccCCC--ccCC-------------C------------HHHceECcCHHHHHHHHHHCCCEEEEEECCCc
Confidence 4689999999997642 0000 0 01156789999999999776 99999999997
Q ss_pred ---------------hHHHHHHhhhCCCCcccceeEEe----ecCCCC--C----ccccccccCCCCCcEEEEcCChh
Q 041302 243 ---------------PYALEMAKLLDPSREYFNARVIS----RDDGTQ--R----HQKGLDVVLGQESAVLILDDTEN 295 (484)
Q Consensus 243 ---------------~YA~~I~~~LDP~~~~F~~RI~s----Rd~c~~--~----~~KdL~~l~~~~~~vVIIDD~~~ 295 (484)
.++..+++.+. .+|...+++ .+++.. + +.+-++++.-+.+.+++|+|+..
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~l~~~g---~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~ 129 (179)
T 3l8h_A 55 LARGLFDTATLNAIHDKMHRALAQMG---GVVDAIFMCPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLR 129 (179)
T ss_dssp TTTTSSCHHHHHHHHHHHHHHHHHTT---CCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHH
T ss_pred cccCcCCHHHHHHHHHHHHHHHHhCC---CceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 66677777665 345432221 233321 1 22334445557788999999874
No 57
>3t7k_A RTT107, regulator of TY1 transposition protein 107; BRCT, DNA repair, phospho-peptide, protein binding; HET: SEP; 2.03A {Saccharomyces cerevisiae} PDB: 3t7j_A* 3t7i_A
Probab=97.43 E-value=0.00041 Score=67.45 Aligned_cols=105 Identities=13% Similarity=0.084 Sum_probs=77.3
Q ss_pred chhHHHHhhhhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecC--CCccEEEEcC-CCChHHHHHHhcCC
Q 041302 366 RDVRQVLKMVRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELD--PSVTHVVSTD-ARTEKSRWAAKEAK 442 (484)
Q Consensus 366 ~DVr~IL~~lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~--~~vTHlVa~~-~~T~K~~~A~~~gi 442 (484)
.+++.||..+-...--..+.++||.-.. ..+..+ .+....+|-.|..+++ .+++|++|.+ .+|+|+..|+..|-
T Consensus 6 ~~a~~il~~~~~~~~~~i~ai~TGc~~~--~~~~~D-~~~Lr~LGI~Iv~d~~~~~~~n~LiAPkilRT~KFL~sLa~~P 82 (256)
T 3t7k_A 6 TKAEKILARFNELPNYDLKAVCTGCFHD--GFNEVD-IEILNQLGIKIFDNIKETDKLNCIFAPKILRTEKFLKSLSFEP 82 (256)
T ss_dssp -CHHHHHHTCSCCCCCCEEEEESSSCSS--CCCHHH-HHHHHHTTEEECSSCCGGGCCCEEECSSCCCBHHHHHHTTSTT
T ss_pred HHHHHHHHhcccCCCeeEEEEecCCccc--ccCHHH-HHHHHHcCeEEEecCcccCCCCEEEcCchhhHHHHHHHhccCc
Confidence 3566676654333334667788886412 234445 4567889999999996 3799999997 49999999999863
Q ss_pred --eeeChhhHHHHHHh---cC------CCCCCCCCCCCCCCc
Q 041302 443 --FLVDPRWIETANFL---WQ------RQPEENFPVQQTKPE 473 (484)
Q Consensus 443 --~IV~~~WL~~c~~~---w~------r~dE~~Y~l~~~~~~ 473 (484)
+||+|+||.+|+.. .+ .++.++|.+.+...+
T Consensus 83 ~~~il~p~FI~~~Lk~ih~~~~~~~~~~l~~~dY~L~d~~~E 124 (256)
T 3t7k_A 83 LKFALKPEFIIDLLKQIHSKKDKLSQININLFDYEINGINES 124 (256)
T ss_dssp CCEEECTHHHHHHHHHHC-------CCCCCSSTTBCTTCCHH
T ss_pred cceEeCHHHHHHHHHHhhcCCcccccccCChhhccCCCcchh
Confidence 69999999999998 66 788999998877654
No 58
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=97.42 E-value=0.00019 Score=66.97 Aligned_cols=105 Identities=11% Similarity=-0.016 Sum_probs=68.1
Q ss_pred hcCccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhh-CCeEEEec
Q 041302 160 RHRKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASE-MFEMYIYT 238 (484)
Q Consensus 160 ~~rKL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~-~yEl~IyT 238 (484)
..+...+++|+|+||+...... . . .-.+.+.||+.++|+.|.+ -|.++|.|
T Consensus 22 ~~~~k~v~~D~DGTL~~~~~~~--~--------------~------------~~~~~~~pg~~e~L~~L~~~G~~~~ivT 73 (211)
T 2gmw_A 22 AKSVPAIFLDRDGTINVDHGYV--H--------------E------------IDNFEFIDGVIDAMRELKKMGFALVVVT 73 (211)
T ss_dssp --CBCEEEECSBTTTBCCCSSC--C--------------S------------GGGCCBCTTHHHHHHHHHHTTCEEEEEE
T ss_pred hhcCCEEEEcCCCCeECCCCcc--c--------------C------------cccCcCCcCHHHHHHHHHHCCCeEEEEE
Confidence 3345689999999999754210 0 0 0114567999999999976 49999999
Q ss_pred CCc---------------HhHHHHHHhhhCCCCcccceeEEeec-----------CCC--CC----ccccccccCCCCCc
Q 041302 239 MGD---------------RPYALEMAKLLDPSREYFNARVISRD-----------DGT--QR----HQKGLDVVLGQESA 286 (484)
Q Consensus 239 ~g~---------------r~YA~~I~~~LDP~~~~F~~RI~sRd-----------~c~--~~----~~KdL~~l~~~~~~ 286 (484)
++. ..++..+++.+.-. |..-+++.+ ++. ++ +.+-++++.-+.+.
T Consensus 74 n~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~lgi~~~~ 150 (211)
T 2gmw_A 74 NQSGIARGKFTEAQFETLTEWMDWSLADRDVD---LDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAA 150 (211)
T ss_dssp ECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGG
T ss_pred CcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc---eEEEEECCcCCCCcccccCccCcCCCCCHHHHHHHHHHcCCCHHH
Confidence 999 58888888877654 543333322 221 11 12223344446778
Q ss_pred EEEEcCChh
Q 041302 287 VLILDDTEN 295 (484)
Q Consensus 287 vVIIDD~~~ 295 (484)
+++|+|+..
T Consensus 151 ~~~VGD~~~ 159 (211)
T 2gmw_A 151 SYMVGDKLE 159 (211)
T ss_dssp CEEEESSHH
T ss_pred EEEEcCCHH
Confidence 999999874
No 59
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=97.37 E-value=0.00031 Score=64.86 Aligned_cols=80 Identities=16% Similarity=0.119 Sum_probs=60.2
Q ss_pred EEEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCC------ccccccccCCCCC-
Q 041302 214 MTKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQR------HQKGLDVVLGQES- 285 (484)
Q Consensus 214 ~vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~------~~KdL~~l~~~~~- 285 (484)
.+.+.||+.++|+.+.+. +.++|+|++.+.++..+++.+.-.. +|. .+++.++.... +.+-++++.-+.+
T Consensus 101 ~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~-~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~ 178 (231)
T 3kzx_A 101 NFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTH-YFD-SIIGSGDTGTIKPSPEPVLAALTNINIEPSK 178 (231)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG-GCS-EEEEETSSSCCTTSSHHHHHHHHHHTCCCST
T ss_pred cceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchh-hee-eEEcccccCCCCCChHHHHHHHHHcCCCccc
Confidence 467899999999999876 9999999999999999999887654 674 46666665421 1222344444566
Q ss_pred cEEEEcCChh
Q 041302 286 AVLILDDTEN 295 (484)
Q Consensus 286 ~vVIIDD~~~ 295 (484)
.++.|+|++.
T Consensus 179 ~~v~vGD~~~ 188 (231)
T 3kzx_A 179 EVFFIGDSIS 188 (231)
T ss_dssp TEEEEESSHH
T ss_pred CEEEEcCCHH
Confidence 8999999875
No 60
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=97.32 E-value=0.00028 Score=62.48 Aligned_cols=102 Identities=14% Similarity=0.091 Sum_probs=68.4
Q ss_pred ccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhhC-CeEEEecCCc
Q 041302 163 KLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASEM-FEMYIYTMGD 241 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~~-yEl~IyT~g~ 241 (484)
...+++|+|+||+++... +.. .....-.+.|+..++|+.+.+. +.++|.|++.
T Consensus 9 ~k~v~~DlDGTL~~~~~~--~~~------------------------~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~ 62 (162)
T 2p9j_A 9 LKLLIMDIDGVLTDGKLY--YTE------------------------HGETIKVFNVLDGIGIKLLQKMGITLAVISGRD 62 (162)
T ss_dssp CCEEEECCTTTTSCSEEE--EET------------------------TEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCC
T ss_pred eeEEEEecCcceECCcee--ecC------------------------CCceeeeecccHHHHHHHHHHCCCEEEEEeCCC
Confidence 457899999999976531 000 0123455679999999999765 9999999999
Q ss_pred HhHHHHHHhhhCCCCcccceeEEeecCCCC--CccccccccCCCCCcEEEEcCChhhh
Q 041302 242 RPYALEMAKLLDPSREYFNARVISRDDGTQ--RHQKGLDVVLGQESAVLILDDTENAW 297 (484)
Q Consensus 242 r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~~~KdL~~l~~~~~~vVIIDD~~~vw 297 (484)
+.++..+++.+.-.. +|.. ..+. .+.+-++.+.-+.+.+++|+|+..-.
T Consensus 63 ~~~~~~~l~~~gl~~-~~~~------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di 113 (162)
T 2p9j_A 63 SAPLITRLKELGVEE-IYTG------SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDI 113 (162)
T ss_dssp CHHHHHHHHHTTCCE-EEEC------C--CHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred cHHHHHHHHHcCCHh-hccC------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 999999999887653 5532 1111 11222333334667899999986433
No 61
>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*
Probab=97.30 E-value=0.00019 Score=69.46 Aligned_cols=88 Identities=14% Similarity=0.109 Sum_probs=68.3
Q ss_pred cccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeeecC----CCccEEEEcCCC------ChHHHHHHhcCCeeeC
Q 041302 377 GEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIELD----PSVTHVVSTDAR------TEKSRWAAKEAKFLVD 446 (484)
Q Consensus 377 ~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~i~----~~vTHlVa~~~~------T~K~~~A~~~gi~IV~ 446 (484)
.++|+|+.++|.+- .+....+.++++.-||+|..... ...||.++.-.+ ..+++.+.+.|++||+
T Consensus 133 ~~lF~g~~v~l~~~-----~~~~~~l~~ii~agGg~vl~~~~~~~~~~~t~~~vd~~~~~~~~~~~~~~~~~~~~i~~v~ 207 (235)
T 3al2_A 133 EGAFSGWKVILHVD-----QSREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSDLNKLKPDDSGVNIAEAAAQNVYCLR 207 (235)
T ss_dssp SSTTTTCEEEEECC-----HHHHHHHHHHHHHTTCEECSSCCGGGGGGCSEEEECC--------CCCHHHHHHTTCEEEE
T ss_pred CCCCCCcEEEEecC-----CCcHHHHHHHHHcCCcEEecCCCCCccccCceEEEecccCCccchhHHHHHHHHcCCcEEc
Confidence 58999999988763 23456789999999999986543 246898775221 1356777889999999
Q ss_pred hhhHHHHHHhcCCCCCCCCCCCC
Q 041302 447 PRWIETANFLWQRQPEENFPVQQ 469 (484)
Q Consensus 447 ~~WL~~c~~~w~r~dE~~Y~l~~ 469 (484)
++||.+|+.+.+..+.+.|.+..
T Consensus 208 ~ewlld~i~~~~~~~~~~y~l~~ 230 (235)
T 3al2_A 208 TEYIADYLMQESPPHVENYCLPE 230 (235)
T ss_dssp THHHHHHHHCSSCCCHHHHBCGG
T ss_pred HHHHHHHHhcCCCCChhheEccc
Confidence 99999999999888888888754
No 62
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=97.25 E-value=0.00023 Score=64.90 Aligned_cols=81 Identities=11% Similarity=0.048 Sum_probs=58.5
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecC-----------CCC-C----ccccc
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDD-----------GTQ-R----HQKGL 277 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~-----------c~~-~----~~KdL 277 (484)
+.++||+.++|+.+.+. |.++|.|++.+.++..+++.+.-.. +|...+ +.++ +.. + +.+-+
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~~~-~~~~~~~~~~~~~~~~~~k~k~~~~~~~~ 151 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDA-AFSNTL-IVENDALNGLVTGHMMFSHSKGEMLLVLQ 151 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSE-EEEEEE-EEETTEEEEEEEESCCSTTHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcch-hcccee-EEeCCEEEeeeccCCCCCCChHHHHHHHH
Confidence 66999999999999877 9999999999999999999987654 676533 3332 111 0 12223
Q ss_pred cccCCCCCcEEEEcCChhhh
Q 041302 278 DVVLGQESAVLILDDTENAW 297 (484)
Q Consensus 278 ~~l~~~~~~vVIIDD~~~vw 297 (484)
+++..+.+.++.|+|++.-.
T Consensus 152 ~~~g~~~~~~i~vGDs~~Di 171 (217)
T 3m1y_A 152 RLLNISKTNTLVVGDGANDL 171 (217)
T ss_dssp HHHTCCSTTEEEEECSGGGH
T ss_pred HHcCCCHhHEEEEeCCHHHH
Confidence 33444678899999986533
No 63
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=97.17 E-value=0.00033 Score=72.94 Aligned_cols=106 Identities=14% Similarity=0.112 Sum_probs=71.2
Q ss_pred cCccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhhC-CeEEEecC
Q 041302 161 HRKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASEM-FEMYIYTM 239 (484)
Q Consensus 161 ~rKL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~~-yEl~IyT~ 239 (484)
.+...+++|+|+||+.+....... .. ..-+..+-||+.++|+.|.+. |.|.|.|+
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~~~~-------------~~-----------~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN 111 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGKVFP-------------TS-----------PSDWRILYPEIPKKLQELAAEGYKLVIFTN 111 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCSSSC-------------SS-----------TTCCEESCTTHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCeEEEEeCCCCccccCCCccCC-------------CC-----------HHHhhhhcccHHHHHHHHHHCCCeEEEEeC
Confidence 356789999999999765311000 00 111344789999999999765 99999999
Q ss_pred Cc------------HhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccC----CCCCcEEEEcCCh
Q 041302 240 GD------------RPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVL----GQESAVLILDDTE 294 (484)
Q Consensus 240 g~------------r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~----~~~~~vVIIDD~~ 294 (484)
.. +.++..+++.+.- .| +.+++.+++.. + +.+-+..+. -+.+.+++|.|+.
T Consensus 112 ~~gi~~g~~~~~~~~~~~~~~l~~lgl---~f-d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~ 184 (416)
T 3zvl_A 112 QMGIGRGKLPAEVFKGKVEAVLEKLGV---PF-QVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAA 184 (416)
T ss_dssp CHHHHTTSSCHHHHHHHHHHHHHHHTS---CC-EEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCS
T ss_pred CccccCCCCCHHHHHHHHHHHHHHcCC---CE-EEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCC
Confidence 76 3347777777754 36 45777777642 1 233344444 3678899999985
No 64
>4gns_A Chitin biosynthesis protein CHS5; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.94 E-value=0.0016 Score=59.84 Aligned_cols=102 Identities=16% Similarity=0.215 Sum_probs=77.8
Q ss_pred HHHHhhhhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEe-eecCCCccEEEEcCC----CChHHHHHHhcCCe
Q 041302 369 RQVLKMVRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCS-IELDPSVTHVVSTDA----RTEKSRWAAKEAKF 443 (484)
Q Consensus 369 r~IL~~lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~-~~i~~~vTHlVa~~~----~T~K~~~A~~~gi~ 443 (484)
+.|+..-+-.-++|.++|+--+-|.. ....-.+.+.....||.-. ..+.-.+||+||.+. ..+..-.|+-++|+
T Consensus 151 kvilrthkmtdmsgitvclgpldplk-eisdlqisqclshigarplqrhvaidtthfvcndldneesneelirakhnnip 229 (290)
T 4gns_A 151 KVILRTHKMTDMSGITVCLGPLDPLK-EISDLQISQCLSHIGARPLQRHVAIDTTHFVCNDLDNEESNEELIRAKHNNIP 229 (290)
T ss_dssp EEEEECCCTTCCTTCCEEECCCCGGG-TCCHHHHHHHHHHTTCCCCBSSCCTTCCEEECSCCTTCTTCHHHHHHHHTTCC
T ss_pred heeeeecccccccCceEEecCCChhh-hhhhccHHHHHHHhCCchhhheeeeecceeeecCCCcccchHHHHhhhccCCC
Confidence 34566666677899999996555554 2344566777888899865 455568999999865 34566678889999
Q ss_pred eeChhhHHHHHHhcCCCCCCCCCCCCCC
Q 041302 444 LVDPRWIETANFLWQRQPEENFPVQQTK 471 (484)
Q Consensus 444 IV~~~WL~~c~~~w~r~dE~~Y~l~~~~ 471 (484)
||.|+|+.+|-...+-+.-..|.+....
T Consensus 230 ivrpewvracevekrivgvrgfyldadq 257 (290)
T 4gns_A 230 IVRPEWVRACEVEKRIVGVRGFYLDADQ 257 (290)
T ss_dssp EECTHHHHHHHHTTSCCCSGGGBTTSCG
T ss_pred ccCHHHHHHHhhhheeeeeeeEEEcccH
Confidence 9999999999999999999999886543
No 65
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=96.82 E-value=0.00083 Score=69.62 Aligned_cols=132 Identities=14% Similarity=0.029 Sum_probs=81.4
Q ss_pred HHHHHHHHhhhhhhhhhcCccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHH
Q 041302 144 NDEIDRLRNTDMKHLLRHRKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHT 223 (484)
Q Consensus 144 ~~ea~~~~~~~~~~ll~~rKL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~e 223 (484)
+..|..+. .....|..++...||+|||+||..-.... .++. ...+.|- .. .-..-||+.+
T Consensus 204 ~~~a~~~~-~~~~~l~~~~iK~lv~DvDnTL~~G~l~~---dG~~-----~~~~~dg----------~g-~g~~ypgv~e 263 (387)
T 3nvb_A 204 PIISSRTI-DIIAAIQGKFKKCLILDLDNTIWGGVVGD---DGWE-----NIQVGHG----------LG-IGKAFTEFQE 263 (387)
T ss_dssp HHHHHHHH-HHHHHHTTCCCCEEEECCBTTTBBSCHHH---HCGG-----GSBCSSS----------SS-THHHHHHHHH
T ss_pred HHHHHHHH-HHHHHHHhCCCcEEEEcCCCCCCCCeecC---CCce-----eEEeccC----------cc-ccccCHHHHH
Confidence 44454444 45567788889999999999998765410 0000 0001110 00 0234589999
Q ss_pred HHHHhhhC-CeEEEecCCcHhHHHHHHhh-----hCCCCcccceeEEeecCCCCCccccccccCCCCCcEEEEcCChhhh
Q 041302 224 FLKEASEM-FEMYIYTMGDRPYALEMAKL-----LDPSREYFNARVISRDDGTQRHQKGLDVVLGQESAVLILDDTENAW 297 (484)
Q Consensus 224 FL~~ls~~-yEl~IyT~g~r~YA~~I~~~-----LDP~~~~F~~RI~sRd~c~~~~~KdL~~l~~~~~~vVIIDD~~~vw 297 (484)
+|+.|.+. +.+.|.|+..+.++..+++. +...+ +|. -+.....-+..+.+-++.+.-..+.+++|+|+..-.
T Consensus 264 ~L~~Lk~~Gi~laI~Snn~~~~v~~~l~~~~~~~l~l~~-~~~-v~~~~KPKp~~l~~al~~Lgl~pee~v~VGDs~~Di 341 (387)
T 3nvb_A 264 WVKKLKNRGIIIAVCSKNNEGKAKEPFERNPEMVLKLDD-IAV-FVANWENKADNIRTIQRTLNIGFDSMVFLDDNPFER 341 (387)
T ss_dssp HHHHHHHTTCEEEEEEESCHHHHHHHHHHCTTCSSCGGG-CSE-EEEESSCHHHHHHHHHHHHTCCGGGEEEECSCHHHH
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHhhccccccCccC-ccE-EEeCCCCcHHHHHHHHHHhCcCcccEEEECCCHHHH
Confidence 99999876 99999999999999999986 44444 442 121111111122333444555778899999987544
No 66
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=96.81 E-value=0.0012 Score=66.25 Aligned_cols=56 Identities=13% Similarity=0.115 Sum_probs=47.9
Q ss_pred hHHHHHHHHHhCCeEeeec-CCCccEEEEcCCCCh----HHHHHHhcCCeeeChhhHHHHHH
Q 041302 399 THYLWKMAEQLGATCSIEL-DPSVTHVVSTDARTE----KSRWAAKEAKFLVDPRWIETANF 455 (484)
Q Consensus 399 ~~~l~~la~~lGA~v~~~i-~~~vTHlVa~~~~T~----K~~~A~~~gi~IV~~~WL~~c~~ 455 (484)
+..+...++++|+.+. +. ...|||||..+..|. |..+|+-+|++||+++||.+...
T Consensus 126 ~~~L~~~L~~LGik~v-~~~~detTHlVm~krnT~KvTvK~L~ALI~gkPIV~~~Fl~al~~ 186 (325)
T 3huf_A 126 LSQWASNLNLLGIPTG-LRDSDATTHFVMNRQAGSSITVGTMYAFLKKTVIIDDSYLQYLST 186 (325)
T ss_dssp HHHHHHHHHTTTCCEE-SSCCTTCCEEECCCCCSSCCCHHHHHHHHTTCEEECHHHHHHHTT
T ss_pred HHHHHHHHHHcCCEEE-EccCCCEEEEEEeccccccchHHHHHHHHCCCcEecHHHHHHHHH
Confidence 4568899999999999 77 677999999865554 59999999999999999999743
No 67
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=96.74 E-value=0.00096 Score=61.93 Aligned_cols=74 Identities=11% Similarity=0.022 Sum_probs=51.2
Q ss_pred EEecccHHHHHHHhhh-CCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCC-CCc
Q 041302 215 TKLRPFVHTFLKEASE-MFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQ-ESA 286 (484)
Q Consensus 215 vklRPgl~eFL~~ls~-~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~-~~~ 286 (484)
+++.||+.++|+.|.+ .|.+.|-|+..+..+..++. .+|. .+++.++... + +.+-+.++... .+.
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~------~~~d-~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~ 107 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA------PVND-WMIAAPRPTAGWPQPDACWMALMALNVSQLEG 107 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT------TTTT-TCEECCCCSSCTTSTHHHHHHHHHTTCSCSTT
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC------ccCC-EEEECCcCCCCCCChHHHHHHHHHcCCCCCcc
Confidence 4577999999999965 59999999999988855443 2553 4666766532 1 23334444433 467
Q ss_pred EEEEcCChh
Q 041302 287 VLILDDTEN 295 (484)
Q Consensus 287 vVIIDD~~~ 295 (484)
+|+|.|+..
T Consensus 108 ~v~VGDs~~ 116 (196)
T 2oda_A 108 CVLISGDPR 116 (196)
T ss_dssp CEEEESCHH
T ss_pred EEEEeCCHH
Confidence 999999864
No 68
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=96.66 E-value=0.002 Score=59.98 Aligned_cols=103 Identities=17% Similarity=0.062 Sum_probs=66.0
Q ss_pred CccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhh-CCeEEEecCC
Q 041302 162 RKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASE-MFEMYIYTMG 240 (484)
Q Consensus 162 rKL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~-~yEl~IyT~g 240 (484)
....+++|+|+||+....... . .....+.||+.++|+.|.+ -|.++|.|++
T Consensus 30 ~~k~i~~D~DGtl~~~~~y~~----------------~------------~~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~ 81 (218)
T 2o2x_A 30 HLPALFLDRDGTINVDTDYPS----------------D------------PAEIVLRPQMLPAIATANRAGIPVVVVTNQ 81 (218)
T ss_dssp SCCCEEECSBTTTBCCCSCTT----------------C------------GGGCCBCGGGHHHHHHHHHHTCCEEEEEEC
T ss_pred cCCEEEEeCCCCcCCCCcccC----------------C------------cccCeECcCHHHHHHHHHHCCCEEEEEcCc
Confidence 356789999999987632110 0 0114568999999999975 5999999999
Q ss_pred cH---------------hHHHHHHhhhCCCCcccceeEEee-----------cCCC--CC----ccccccccCCCCCcEE
Q 041302 241 DR---------------PYALEMAKLLDPSREYFNARVISR-----------DDGT--QR----HQKGLDVVLGQESAVL 288 (484)
Q Consensus 241 ~r---------------~YA~~I~~~LDP~~~~F~~RI~sR-----------d~c~--~~----~~KdL~~l~~~~~~vV 288 (484)
.+ .++..+++.+.-. |..-+++. +++. ++ +.+-++++.-+.+.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---~~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~ 158 (218)
T 2o2x_A 82 SGIARGYFGWSAFAAVNGRVLELLREEGVF---VDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSL 158 (218)
T ss_dssp HHHHTTSCCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCE
T ss_pred CCCCcccccHHHHHHHHHHHHHHHHHcCCc---eeeEEEeecCCCCceeecccCCccCCCCHHHHHHHHHHcCCCHHHEE
Confidence 98 6888888776432 43222232 2222 11 1222333444678899
Q ss_pred EEcCChh
Q 041302 289 ILDDTEN 295 (484)
Q Consensus 289 IIDD~~~ 295 (484)
+|+|+..
T Consensus 159 ~VGD~~~ 165 (218)
T 2o2x_A 159 IVGDKLA 165 (218)
T ss_dssp EEESSHH
T ss_pred EEeCCHH
Confidence 9999863
No 69
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=96.66 E-value=0.0014 Score=65.67 Aligned_cols=80 Identities=16% Similarity=0.079 Sum_probs=57.0
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecC-------CCCC--------cccccc
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDD-------GTQR--------HQKGLD 278 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~-------c~~~--------~~KdL~ 278 (484)
+.++||+.++|+.+.+. |.++|.|++.+.++..+++.+.-.. +|.+.+...+. +... +.+-++
T Consensus 178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~-~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~ 256 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDY-AFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAA 256 (317)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCe-EEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHH
Confidence 56999999999999775 9999999999999999999987754 77654432221 1000 111223
Q ss_pred ccCCCCCcEEEEcCChh
Q 041302 279 VVLGQESAVLILDDTEN 295 (484)
Q Consensus 279 ~l~~~~~~vVIIDD~~~ 295 (484)
++.-+.+.++.|+|+..
T Consensus 257 ~lgv~~~~~i~VGDs~~ 273 (317)
T 4eze_A 257 RLNIATENIIACGDGAN 273 (317)
T ss_dssp HHTCCGGGEEEEECSGG
T ss_pred HcCCCcceEEEEeCCHH
Confidence 33346678999999864
No 70
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=96.41 E-value=0.00022 Score=64.53 Aligned_cols=82 Identities=13% Similarity=0.094 Sum_probs=55.7
Q ss_pred EEEecccHHHHHHHhh-hCCeEEEecCCcHhHHHHHHhh-hCCCCcccceeEEeecCCC--CC----ccccccccCCCCC
Q 041302 214 MTKLRPFVHTFLKEAS-EMFEMYIYTMGDRPYALEMAKL-LDPSREYFNARVISRDDGT--QR----HQKGLDVVLGQES 285 (484)
Q Consensus 214 ~vklRPgl~eFL~~ls-~~yEl~IyT~g~r~YA~~I~~~-LDP~~~~F~~RI~sRd~c~--~~----~~KdL~~l~~~~~ 285 (484)
++.+.||+.++|+.+. ..+.++|.|++.+.++..++.. +.-. .+|. .+++.++.. ++ +.+-++.+.-+.+
T Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~-~~f~-~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 166 (206)
T 2b0c_A 89 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR-DAAD-HIYLSQDLGMRKPEARIYQHVLQAEGFSPS 166 (206)
T ss_dssp EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH-HHCS-EEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred hcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChh-hhee-eEEEecccCCCCCCHHHHHHHHHHcCCCHH
Confidence 5789999999999998 5699999999999887766554 3222 2563 466555432 11 2223344445678
Q ss_pred cEEEEcCChhhh
Q 041302 286 AVLILDDTENAW 297 (484)
Q Consensus 286 ~vVIIDD~~~vw 297 (484)
.+++|+|++.-.
T Consensus 167 ~~~~vgD~~~Di 178 (206)
T 2b0c_A 167 DTVFFDDNADNI 178 (206)
T ss_dssp GEEEEESCHHHH
T ss_pred HeEEeCCCHHHH
Confidence 899999987543
No 71
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=96.27 E-value=0.0045 Score=56.06 Aligned_cols=101 Identities=11% Similarity=0.030 Sum_probs=66.7
Q ss_pred ccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhh-CCeEEEecCCc
Q 041302 163 KLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASE-MFEMYIYTMGD 241 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~-~yEl~IyT~g~ 241 (484)
-..+++|||+||+++... +.. .....-.+.|...++|+.+.+ -+.++|.|+..
T Consensus 8 ik~i~~DlDGTL~~~~~~--~~~------------------------~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~ 61 (180)
T 1k1e_A 8 IKFVITDVDGVLTDGQLH--YDA------------------------NGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRD 61 (180)
T ss_dssp CCEEEEECTTTTSCSEEE--EET------------------------TEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CeEEEEeCCCCcCCCCee--ecc------------------------CcceeeeeccchHHHHHHHHHCCCeEEEEeCCC
Confidence 357899999999976531 000 012334567888899999965 59999999999
Q ss_pred HhHHHHHHhhhCCCCcccceeEEeecCCCC-Ccccc-ccccCCCCCcEEEEcCChhh
Q 041302 242 RPYALEMAKLLDPSREYFNARVISRDDGTQ-RHQKG-LDVVLGQESAVLILDDTENA 296 (484)
Q Consensus 242 r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~-~~~Kd-L~~l~~~~~~vVIIDD~~~v 296 (484)
..++..+++.+.-.. +|.. ..++ ..++. ++.+.-+.+.++.|+|+..=
T Consensus 62 ~~~~~~~~~~lgl~~-~~~~------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~D 111 (180)
T 1k1e_A 62 SPILRRRIADLGIKL-FFLG------KLEKETACFDLMKQAGVTAEQTAYIGDDSVD 111 (180)
T ss_dssp CHHHHHHHHHHTCCE-EEES------CSCHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred cHHHHHHHHHcCCce-eecC------CCCcHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 999999999887654 4422 1111 11111 22333356789999998643
No 72
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=96.13 E-value=0.00095 Score=59.12 Aligned_cols=115 Identities=12% Similarity=-0.037 Sum_probs=68.2
Q ss_pred ccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhhC-CeEEEecCCc
Q 041302 163 KLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASEM-FEMYIYTMGD 241 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~~-yEl~IyT~g~ 241 (484)
-..+++|+|+||+.+...- ... .. ...-+..++++ .|+.+.+. +.+.|.|++.
T Consensus 4 ik~vifD~DGTL~~~~~~~--~~~----------------~~------~~~~~~~~~~~--~l~~l~~~g~~~~i~T~~~ 57 (164)
T 3e8m_A 4 IKLILTDIDGVWTDGGMFY--DQT----------------GN------EWKKFNTSDSA--GIFWAHNKGIPVGILTGEK 57 (164)
T ss_dssp CCEEEECSTTTTSSSEEEE--CSS----------------SC------EEEEEEGGGHH--HHHHHHHTTCCEEEECSSC
T ss_pred ceEEEEcCCCceEcCcEEE--cCC----------------Cc------EEEEecCChHH--HHHHHHHCCCEEEEEeCCC
Confidence 3579999999999865310 000 00 00112344443 78888654 9999999999
Q ss_pred HhHHHHHHhhhCCCCcccceeEEeecCCCCCccccccccCCCCCcEEEEcCChhhhhcCCCCeEEec
Q 041302 242 RPYALEMAKLLDPSREYFNARVISRDDGTQRHQKGLDVVLGQESAVLILDDTENAWTKHRDNLILME 308 (484)
Q Consensus 242 r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~~~KdL~~l~~~~~~vVIIDD~~~vw~~~~~NlI~I~ 308 (484)
+.++..+++.+.-.. +|... ......+.+-++.+.-+.+.+++|+|+..=...-...++.+.
T Consensus 58 ~~~~~~~~~~~gl~~-~~~~~----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~ 119 (164)
T 3e8m_A 58 TEIVRRRAEKLKVDY-LFQGV----VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGV 119 (164)
T ss_dssp CHHHHHHHHHTTCSE-EECSC----SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEEC
T ss_pred hHHHHHHHHHcCCCE-eeccc----CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence 999999999887653 44321 000001222233444467889999998754433234455443
No 73
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=96.00 E-value=0.0079 Score=58.58 Aligned_cols=121 Identities=14% Similarity=0.141 Sum_probs=63.4
Q ss_pred hcCccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhhC-CeEEEec
Q 041302 160 RHRKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASEM-FEMYIYT 238 (484)
Q Consensus 160 ~~rKL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~~-yEl~IyT 238 (484)
..++..+|+||||||+.+...- ... . .....+.+.. ..+. ...-..+.||+.++|+.|.+. +.|.|.|
T Consensus 56 ~~~~kavifDlDGTLld~~~~~----~~~-~-~~~~~~~~~~--~~~~---~~~~~~~~pg~~e~L~~L~~~Gi~i~iaT 124 (258)
T 2i33_A 56 TEKKPAIVLDLDETVLDNSPHQ----AMS-V-KTGKGYPYKW--DDWI---NKAEAEALPGSIDFLKYTESKGVDIYYIS 124 (258)
T ss_dssp CSSEEEEEECSBTTTEECHHHH----HHH-H-HHSCCTTTTH--HHHH---HHCCCEECTTHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCcccCcCCHHHH----HHH-H-hcccchHHHH--HHHH---HcCCCCcCccHHHHHHHHHHCCCEEEEEc
Confidence 5567899999999999875210 000 0 0000000000 0000 001145779999999999765 9999999
Q ss_pred CCc---HhHHHHHHhhhCCCC-cccceeEEeecCCCCCccccccccC--CCCCcEEEEcCChh
Q 041302 239 MGD---RPYALEMAKLLDPSR-EYFNARVISRDDGTQRHQKGLDVVL--GQESAVLILDDTEN 295 (484)
Q Consensus 239 ~g~---r~YA~~I~~~LDP~~-~~F~~RI~sRd~c~~~~~KdL~~l~--~~~~~vVIIDD~~~ 295 (484)
+.. +..+...++.+.-.. .+| .-+++.++ . +.+...... .+...+++|.|+..
T Consensus 125 nr~~~~~~~~~~~L~~~Gl~~v~~~-~vi~~~~~-~--~K~~~~~~~~~~~~~~~l~VGDs~~ 183 (258)
T 2i33_A 125 NRKTNQLDATIKNLERVGAPQATKE-HILLQDPK-E--KGKEKRRELVSQTHDIVLFFGDNLS 183 (258)
T ss_dssp EEEGGGHHHHHHHHHHHTCSSCSTT-TEEEECTT-C--CSSHHHHHHHHHHEEEEEEEESSGG
T ss_pred CCchhHHHHHHHHHHHcCCCcCCCc-eEEECCCC-C--CCcHHHHHHHHhCCCceEEeCCCHH
Confidence 998 444555555554431 234 33443332 1 112221111 12344788999754
No 74
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=95.96 E-value=0.0036 Score=64.49 Aligned_cols=80 Identities=14% Similarity=0.010 Sum_probs=55.8
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeec---------CCCC------Ccccccc
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRD---------DGTQ------RHQKGLD 278 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd---------~c~~------~~~KdL~ 278 (484)
+.++||+.++|+.+.+. |.++|.|++.+.++..+++.+.-.. +|.+.+-..+ +... .+.+-++
T Consensus 255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~-~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~ 333 (415)
T 3p96_A 255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDY-VAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQ 333 (415)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSE-EEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccc-eeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHH
Confidence 57999999999999876 9999999999999999999987753 6654331111 1000 0111123
Q ss_pred ccCCCCCcEEEEcCChh
Q 041302 279 VVLGQESAVLILDDTEN 295 (484)
Q Consensus 279 ~l~~~~~~vVIIDD~~~ 295 (484)
++.-+.+.++.|+|+..
T Consensus 334 ~~gi~~~~~i~vGD~~~ 350 (415)
T 3p96_A 334 RAGVPMAQTVAVGDGAN 350 (415)
T ss_dssp HHTCCGGGEEEEECSGG
T ss_pred HcCcChhhEEEEECCHH
Confidence 33346678999999874
No 75
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=95.82 E-value=0.0033 Score=57.29 Aligned_cols=40 Identities=13% Similarity=0.066 Sum_probs=35.3
Q ss_pred EEecccHHHHHHHhhhC--CeEEEecCCcHhHHHHHHhhhCC
Q 041302 215 TKLRPFVHTFLKEASEM--FEMYIYTMGDRPYALEMAKLLDP 254 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~--yEl~IyT~g~r~YA~~I~~~LDP 254 (484)
+.+.||+.++|+.+.+. |.+.|.|++.+.++..+++.++-
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 57899999999999874 99999999999999988887644
No 76
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=95.78 E-value=0.0092 Score=54.39 Aligned_cols=82 Identities=20% Similarity=0.202 Sum_probs=63.9
Q ss_pred EEEecccHHHHHHHhh-hCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC------CccccccccCCCCCc
Q 041302 214 MTKLRPFVHTFLKEAS-EMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ------RHQKGLDVVLGQESA 286 (484)
Q Consensus 214 ~vklRPgl~eFL~~ls-~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~------~~~KdL~~l~~~~~~ 286 (484)
.++..||+.++|+.+. ..|.+.|.|++.+.++..+++.++-.. +|. .+++.++... .+.+-++++....+.
T Consensus 82 ~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~-~fd-~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e 159 (216)
T 3kbb_A 82 LLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK-YFD-VMVFGDQVKNGKPDPEIYLLVLERLNVVPEK 159 (216)
T ss_dssp HCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCS-EEECGGGSSSCTTSTHHHHHHHHHHTCCGGG
T ss_pred hcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc-ccc-ccccccccCCCcccHHHHHHHHHhhCCCccc
Confidence 3678999999999995 569999999999999999999988765 885 4665665432 134556666667889
Q ss_pred EEEEcCChhhh
Q 041302 287 VLILDDTENAW 297 (484)
Q Consensus 287 vVIIDD~~~vw 297 (484)
+|+|+|++.-.
T Consensus 160 ~l~VgDs~~Di 170 (216)
T 3kbb_A 160 VVVFEDSKSGV 170 (216)
T ss_dssp EEEEECSHHHH
T ss_pred eEEEecCHHHH
Confidence 99999987533
No 77
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=95.68 E-value=0.015 Score=55.02 Aligned_cols=72 Identities=18% Similarity=0.258 Sum_probs=50.3
Q ss_pred EecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCCccccccccCCCCCcEEEEcCCh
Q 041302 216 KLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQRHQKGLDVVLGQESAVLILDDTE 294 (484)
Q Consensus 216 klRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~~~KdL~~l~~~~~~vVIIDD~~ 294 (484)
.++||+.++|+.+.+. +.+.|.|++.+.++..+++.+.-.. +|.. +++.+.. ...|.+... -.+++|.|+.
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~f~~-~~~~~k~--~~~k~~~~~----~~~~~vGD~~ 215 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD-YFAE-VLPHEKA--EKVKEVQQK----YVTAMVGDGV 215 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-EECS-CCGGGHH--HHHHHHHTT----SCEEEEECTT
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh-HhHh-cCHHHHH--HHHHHHHhc----CCEEEEeCCc
Confidence 7999999999999774 9999999999999999999987654 5632 3322211 122322211 1568888865
Q ss_pred h
Q 041302 295 N 295 (484)
Q Consensus 295 ~ 295 (484)
.
T Consensus 216 n 216 (280)
T 3skx_A 216 N 216 (280)
T ss_dssp T
T ss_pred h
Confidence 3
No 78
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=95.47 E-value=0.01 Score=53.70 Aligned_cols=69 Identities=12% Similarity=0.028 Sum_probs=46.1
Q ss_pred ecccHHHHHHHhhh-CCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--CccccccccCCCCCcEEEEcCC
Q 041302 217 LRPFVHTFLKEASE-MFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--RHQKGLDVVLGQESAVLILDDT 293 (484)
Q Consensus 217 lRPgl~eFL~~ls~-~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~~~KdL~~l~~~~~~vVIIDD~ 293 (484)
+++++ +|+.+.+ .+.+.|.|++.+.++..+++.+.-. +|... .++ ...+-++.+.-+.+.++.|.|+
T Consensus 42 ~~~~~--~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~--~~~~~------~~k~~~l~~~~~~~~~~~~~~~~vGD~ 111 (176)
T 3mmz_A 42 RGDGL--GIAALRKSGLTMLILSTEQNPVVAARARKLKIP--VLHGI------DRKDLALKQWCEEQGIAPERVLYVGND 111 (176)
T ss_dssp HHHHH--HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC--EEESC------SCHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred cccHH--HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe--eEeCC------CChHHHHHHHHHHcCCCHHHEEEEcCC
Confidence 34444 8888865 5999999999999999999998765 45321 111 1112223333466788999997
Q ss_pred hh
Q 041302 294 EN 295 (484)
Q Consensus 294 ~~ 295 (484)
..
T Consensus 112 ~n 113 (176)
T 3mmz_A 112 VN 113 (176)
T ss_dssp GG
T ss_pred HH
Confidence 54
No 79
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=95.45 E-value=0.02 Score=52.16 Aligned_cols=78 Identities=12% Similarity=0.067 Sum_probs=48.7
Q ss_pred HHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--CccccccccCCCCCcEEEEcCChhhhhc
Q 041302 223 TFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--RHQKGLDVVLGQESAVLILDDTENAWTK 299 (484)
Q Consensus 223 eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~~~KdL~~l~~~~~~vVIIDD~~~vw~~ 299 (484)
.+|+.+.+. +.++|.|++++.++..+++.+.-.. +|.. . .++ .+.+=++.+..+.+.+++|+|+..=...
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~-~~~~-----~-kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~ 132 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH-LYQG-----Q-SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPV 132 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE-EECS-----C-SCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce-eecC-----C-CCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHH
Confidence 388888765 9999999999999999999886543 4422 0 111 0111123333456789999998643332
Q ss_pred CCCCeEEe
Q 041302 300 HRDNLILM 307 (484)
Q Consensus 300 ~~~NlI~I 307 (484)
-...++.+
T Consensus 133 a~~ag~~~ 140 (188)
T 2r8e_A 133 MEKVGLSV 140 (188)
T ss_dssp HTTSSEEE
T ss_pred HHHCCCEE
Confidence 23345554
No 80
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=95.36 E-value=0.016 Score=53.01 Aligned_cols=100 Identities=17% Similarity=0.024 Sum_probs=63.1
Q ss_pred ccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhh-CCeEEEecCCc
Q 041302 163 KLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASE-MFEMYIYTMGD 241 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~-~yEl~IyT~g~ 241 (484)
-..+++|+||||+.+...- ... .. .-..+.+++++ +|+.+.+ .+.+.|.|++.
T Consensus 19 ik~vifD~DGTL~d~~~~~--~~~----------------~~------~~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~ 72 (189)
T 3mn1_A 19 IKLAVFDVDGVLTDGRLYF--MED----------------GS------EIKTFNTLDGQ--GIKMLIASGVTTAIISGRK 72 (189)
T ss_dssp CCEEEECSTTTTSCSEEEE--ETT----------------SC------EEEEEEHHHHH--HHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEcCCCCcCCccEee--ccC----------------Cc------EeeeeccccHH--HHHHHHHCCCEEEEEECcC
Confidence 4589999999999875310 000 00 01123345554 8888876 49999999999
Q ss_pred HhHHHHHHhhhCCCCcccceeEEeecCCCC-C-ccccccccCCCCCcEEEEcCChh
Q 041302 242 RPYALEMAKLLDPSREYFNARVISRDDGTQ-R-HQKGLDVVLGQESAVLILDDTEN 295 (484)
Q Consensus 242 r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~-~-~~KdL~~l~~~~~~vVIIDD~~~ 295 (484)
+.++..+++.+.-.. +|.. + ..+ . ..+-++.+.-+.+.++.|.|+..
T Consensus 73 ~~~~~~~~~~lgl~~-~f~~-~-----~~K~~~~~~~~~~~g~~~~~~~~vGD~~n 121 (189)
T 3mn1_A 73 TAIVERRAKSLGIEH-LFQG-R-----EDKLVVLDKLLAELQLGYEQVAYLGDDLP 121 (189)
T ss_dssp CHHHHHHHHHHTCSE-EECS-C-----SCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred hHHHHHHHHHcCCHH-HhcC-c-----CChHHHHHHHHHHcCCChhHEEEECCCHH
Confidence 999999999987654 5543 1 111 1 11122233346778999999865
No 81
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=95.36 E-value=0.0034 Score=58.47 Aligned_cols=76 Identities=12% Similarity=0.048 Sum_probs=46.3
Q ss_pred HHHhhh-CCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC-Ccccc-ccccCCCCCcEEEEcCChhhhhcCC
Q 041302 225 LKEASE-MFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ-RHQKG-LDVVLGQESAVLILDDTENAWTKHR 301 (484)
Q Consensus 225 L~~ls~-~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~-~~~Kd-L~~l~~~~~~vVIIDD~~~vw~~~~ 301 (484)
|+.|.+ -|.+.|.|++.+..+..+++.+.-.. +|... .++ ..++. ++.+.-+.+.++.|.|+..=...-.
T Consensus 61 l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~-~~~~~------k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~ 133 (195)
T 3n07_A 61 VKALMNAGIEIAIITGRRSQIVENRMKALGISL-IYQGQ------DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVME 133 (195)
T ss_dssp HHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE-EECSC------SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHT
T ss_pred HHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE-EeeCC------CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHH
Confidence 777755 49999999999999999999887653 44321 010 01111 2233346678899999765433222
Q ss_pred CCeEEe
Q 041302 302 DNLILM 307 (484)
Q Consensus 302 ~NlI~I 307 (484)
..++.+
T Consensus 134 ~ag~~v 139 (195)
T 3n07_A 134 KVALRV 139 (195)
T ss_dssp TSSEEE
T ss_pred HCCCEE
Confidence 334444
No 82
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=95.34 E-value=0.0044 Score=57.05 Aligned_cols=66 Identities=12% Similarity=0.045 Sum_probs=43.8
Q ss_pred HHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--CccccccccCCCCCcEEEEcCChhh
Q 041302 224 FLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--RHQKGLDVVLGQESAVLILDDTENA 296 (484)
Q Consensus 224 FL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~~~KdL~~l~~~~~~vVIIDD~~~v 296 (484)
-|+.|.+. +.+.|.|++++..+..+++.+.-.. +|... .+. .+.+-++.+.-+.+.+++|.|+..=
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~-~~~~~------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~D 122 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH-YYKGQ------VDKRSAYQHLKKTLGLNDDEFAYIGDDLPD 122 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-EECSC------SSCHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-ceeCC------CChHHHHHHHHHHhCCCHHHEEEECCCHHH
Confidence 47777654 9999999999999999999886543 44321 111 1122233344466789999998643
No 83
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=95.33 E-value=0.017 Score=51.55 Aligned_cols=79 Identities=20% Similarity=0.210 Sum_probs=60.4
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCcE
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESAV 287 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~v 287 (484)
+.+.|++.++|+.+.+. +.++|+|++.+.++..+++.+.-.. +|. .+++.++... + +.+-++.+.-+.+.+
T Consensus 83 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~-~f~-~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 160 (216)
T 2pib_A 83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK-YFD-VMVFGDQVKNGKPDPEIYLLVLERLNVVPEKV 160 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCS-EEECGGGSSSCTTSTHHHHHHHHHHTCCGGGE
T ss_pred CCcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHH-hcC-EEeecccCCCCCcCcHHHHHHHHHcCCCCceE
Confidence 67899999999999876 9999999999999999999887654 674 4666665432 1 122334444567889
Q ss_pred EEEcCChh
Q 041302 288 LILDDTEN 295 (484)
Q Consensus 288 VIIDD~~~ 295 (484)
+.|+|++.
T Consensus 161 i~iGD~~~ 168 (216)
T 2pib_A 161 VVFEDSKS 168 (216)
T ss_dssp EEEECSHH
T ss_pred EEEeCcHH
Confidence 99999874
No 84
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=95.33 E-value=0.013 Score=53.10 Aligned_cols=81 Identities=14% Similarity=0.089 Sum_probs=59.4
Q ss_pred EEEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCC-------CC--ccccccccCCCC
Q 041302 214 MTKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGT-------QR--HQKGLDVVLGQE 284 (484)
Q Consensus 214 ~vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~-------~~--~~KdL~~l~~~~ 284 (484)
.+.++||+.++|+.+.+.|.++|.|++.+.++..+++.++-.. +|.+.+.+.++.. .+ +.+-++.+....
T Consensus 67 ~~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~ 145 (206)
T 1rku_A 67 TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY 145 (206)
T ss_dssp TCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCC-EEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTT
T ss_pred hcCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcc-eecceeEEcCCceEEeeecCCCchHHHHHHHHHhcC
Confidence 3568999999999998779999999999999999999987665 7855566544431 11 122234443355
Q ss_pred CcEEEEcCChh
Q 041302 285 SAVLILDDTEN 295 (484)
Q Consensus 285 ~~vVIIDD~~~ 295 (484)
..+++|+|+..
T Consensus 146 ~~~~~iGD~~~ 156 (206)
T 1rku_A 146 YRVIAAGDSYN 156 (206)
T ss_dssp CEEEEEECSST
T ss_pred CEEEEEeCChh
Confidence 68999999864
No 85
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=95.28 E-value=0.0032 Score=59.06 Aligned_cols=38 Identities=8% Similarity=0.016 Sum_probs=31.4
Q ss_pred EecccHHHHHHHhhh-CCeEEEecCCcHhHHHHHHhhhC
Q 041302 216 KLRPFVHTFLKEASE-MFEMYIYTMGDRPYALEMAKLLD 253 (484)
Q Consensus 216 klRPgl~eFL~~ls~-~yEl~IyT~g~r~YA~~I~~~LD 253 (484)
...||+.++|+.|.+ -+.+.|.|++.+.++..+++.|.
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~ 126 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLA 126 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHH
Confidence 457899999999965 59999999999887777776643
No 86
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=95.16 E-value=0.026 Score=50.99 Aligned_cols=80 Identities=16% Similarity=0.115 Sum_probs=59.4
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCC--CC----ccccccccCCCCCcEE
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGT--QR----HQKGLDVVLGQESAVL 288 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~--~~----~~KdL~~l~~~~~~vV 288 (484)
+.+.||+.++|+.+.+.|.+.|.|++.+.++..+++.+.... +|. .+++.+++. ++ +.+-++.+.-+.+.++
T Consensus 82 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~~-~f~-~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i 159 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMM-RMA-VTISADDTPKRKPDPLPLLTALEKVNVAPQNAL 159 (209)
T ss_dssp CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGG-GEE-EEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEE
T ss_pred CCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChHh-hcc-EEEecCcCCCCCCCcHHHHHHHHHcCCCcccEE
Confidence 678999999999997669999999999999999999876543 674 566666543 11 1222344444678899
Q ss_pred EEcCChhh
Q 041302 289 ILDDTENA 296 (484)
Q Consensus 289 IIDD~~~v 296 (484)
.|+|+..-
T Consensus 160 ~vGD~~~D 167 (209)
T 2hdo_A 160 FIGDSVSD 167 (209)
T ss_dssp EEESSHHH
T ss_pred EECCChhh
Confidence 99998653
No 87
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=95.14 E-value=0.029 Score=49.88 Aligned_cols=80 Identities=19% Similarity=0.208 Sum_probs=60.7
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCC------ccccccccCCCCCcE
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQR------HQKGLDVVLGQESAV 287 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~------~~KdL~~l~~~~~~v 287 (484)
+.++|++.++|+.+.+. +.++|+|++.+.++..+++.+.-.. +|. .+++.++.... +.+-++++.-+.+.+
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~-~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 165 (214)
T 3e58_A 88 ELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQG-FFD-IVLSGEEFKESKPNPEIYLTALKQLNVQASRA 165 (214)
T ss_dssp HHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCS-EEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred CCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHh-hee-eEeecccccCCCCChHHHHHHHHHcCCChHHe
Confidence 46899999999999876 9999999999999999999887654 675 46667664321 122334444567889
Q ss_pred EEEcCChhh
Q 041302 288 LILDDTENA 296 (484)
Q Consensus 288 VIIDD~~~v 296 (484)
+.|+|++.-
T Consensus 166 ~~iGD~~~D 174 (214)
T 3e58_A 166 LIIEDSEKG 174 (214)
T ss_dssp EEEECSHHH
T ss_pred EEEeccHhh
Confidence 999998653
No 88
>2l42_A DNA-binding protein RAP1; BRCT domain, protein binding; NMR {Saccharomyces cerevisiae}
Probab=95.10 E-value=0.03 Score=46.81 Aligned_cols=88 Identities=14% Similarity=0.055 Sum_probs=65.9
Q ss_pred cccccceeeeeeeccCCC-CCcchHHHHHHHHHhCCeEeeecCCCc--cEEEEcCCCChHHHHHHhcCCeeeChhhHHHH
Q 041302 377 GEVLKGCKLVFSHVFPTK-FPADTHYLWKMAEQLGATCSIELDPSV--THVVSTDARTEKSRWAAKEAKFLVDPRWIETA 453 (484)
Q Consensus 377 ~~vL~G~~IvfSG~~p~~-~~~~~~~l~~la~~lGA~v~~~i~~~v--THlVa~~~~T~K~~~A~~~gi~IV~~~WL~~c 453 (484)
..+|+|..+++..--... .-..-..|.+++...||+|...+.++. -+.|++..++. +++.|+|.+|.+|
T Consensus 9 ~~vF~g~~Fyin~d~~a~ds~~d~d~L~~lI~~nGG~Vl~~lP~~s~~~~yVVSpyN~t--------~LpTVtpTYI~aC 80 (106)
T 2l42_A 9 GPPLSNMKFYLNRDADAHDSLNDIDQLARLIRANGGEVLDSKPRESKENVFIVSPYNHT--------NLPTVTPTYIKAC 80 (106)
T ss_dssp SCSSCCCCBEECCSSSCSSCSSTHHHHHHHHHTTTSCCCEECCCCCSSCCCCBCTTCCC--------SSSBCCTTHHHHH
T ss_pred CccccCcEEEEcCCCccchhhhHHHHHHHHHHhcCcEEhhhCcccccCCeEEEeCCCCC--------CCccccHHHHHHH
Confidence 456999999987532221 123447899999999999999887544 35555544443 6799999999999
Q ss_pred HHhcCCCCCCCCCCCCCCC
Q 041302 454 NFLWQRQPEENFPVQQTKP 472 (484)
Q Consensus 454 ~~~w~r~dE~~Y~l~~~~~ 472 (484)
+.....++-.+|+++....
T Consensus 81 ~~~nTLLnv~~YLvp~d~~ 99 (106)
T 2l42_A 81 CQSNSLLNMENYLVPYDNL 99 (106)
T ss_dssp HHSTTSCGGGGCCBCSCC-
T ss_pred HhcCceecccccccCchhh
Confidence 9999999999999865443
No 89
>3qbz_A DDK kinase regulatory subunit DBF4; FHA domain,RAD53, replication checkpoint, cell cycle; 2.69A {Saccharomyces cerevisiae}
Probab=95.10 E-value=0.032 Score=50.43 Aligned_cols=72 Identities=17% Similarity=0.141 Sum_probs=50.3
Q ss_pred ccccc-ceeeeeeeccCCCCC-cch-------HHHHHHHHHhCCeEeeecCCCccEEEEcCCCC--------hHHHHHHh
Q 041302 377 GEVLK-GCKLVFSHVFPTKFP-ADT-------HYLWKMAEQLGATCSIELDPSVTHVVSTDART--------EKSRWAAK 439 (484)
Q Consensus 377 ~~vL~-G~~IvfSG~~p~~~~-~~~-------~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T--------~K~~~A~~ 439 (484)
+++|. +++|+|-+.-+.... ..+ ..+.+-+..+||.+.+-++.+|||||+.++-. .-+..|.+
T Consensus 56 Rkifk~~~vfYFDt~~~~~~~~~~k~kl~K~~~llkr~f~~LGA~I~~FFd~~VTiVIT~R~i~~~~~~~~~Dil~~A~~ 135 (160)
T 3qbz_A 56 KKIMKRDSRIYFDITDDVEMNTYNKSKMDKRRDLLKRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRAKK 135 (160)
T ss_dssp HHHHHHHCEEEECCCCSSCCCHHHHHHHHHHHHHHHHHHHTTTCEEESSCCTTCCEEEESSCSSCGGGSCTTSHHHHHHH
T ss_pred HHhCccCcEEEecCCChhhhhHHHHHHHHHHHHHHHHHHHHcCCEeeeeccCCeEEEEecCcCcccccCCchhHHHHHHH
Confidence 56787 899999876433211 011 12335667999999999999999999998633 23677888
Q ss_pred cCCeeeChh
Q 041302 440 EAKFLVDPR 448 (484)
Q Consensus 440 ~gi~IV~~~ 448 (484)
.+++|=+.+
T Consensus 136 ~~mKVW~ye 144 (160)
T 3qbz_A 136 NYMKVWSYE 144 (160)
T ss_dssp TTCEEEEHH
T ss_pred cCceecchH
Confidence 888885544
No 90
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=95.10 E-value=0.018 Score=55.06 Aligned_cols=82 Identities=18% Similarity=0.218 Sum_probs=61.9
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCcEE
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESAVL 288 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~vV 288 (484)
+.+.||+.++|+.+.+.|.+.|.|++.+.++..+++.++-.. +|. .+++.++... + +.+-++++.-+.+.+|
T Consensus 120 ~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~f~-~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~ 197 (260)
T 2gfh_A 120 MILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQS-YFD-AIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV 197 (260)
T ss_dssp CCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGG-GCS-EEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHh-hhh-eEEecCCCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence 467899999999998889999999999999999999887754 785 4666665432 1 2333445555678899
Q ss_pred EEcCC--hhhhh
Q 041302 289 ILDDT--ENAWT 298 (484)
Q Consensus 289 IIDD~--~~vw~ 298 (484)
+|+|+ .++-.
T Consensus 198 ~vGDs~~~Di~~ 209 (260)
T 2gfh_A 198 MVGDTLETDIQG 209 (260)
T ss_dssp EEESCTTTHHHH
T ss_pred EECCCchhhHHH
Confidence 99994 45543
No 91
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=95.08 E-value=0.028 Score=51.78 Aligned_cols=80 Identities=20% Similarity=0.291 Sum_probs=59.7
Q ss_pred EEEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCC------ccccccccCCCCCc
Q 041302 214 MTKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQR------HQKGLDVVLGQESA 286 (484)
Q Consensus 214 ~vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~------~~KdL~~l~~~~~~ 286 (484)
.+.+.||+.++|+.+.+. |.+.|.|++.+.++..+++.+.-.. +|. .+++.++.... +.+-++++..+.+.
T Consensus 81 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~-~f~-~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 158 (222)
T 2nyv_A 81 YTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSG-YFD-LIVGGDTFGEKKPSPTPVLKTLEILGEEPEK 158 (222)
T ss_dssp SCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCS-EEECTTSSCTTCCTTHHHHHHHHHHTCCGGG
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHH-Hhe-EEEecCcCCCCCCChHHHHHHHHHhCCCchh
Confidence 467899999999999775 9999999999999999999887543 674 46766654321 12223344446778
Q ss_pred EEEEcCChh
Q 041302 287 VLILDDTEN 295 (484)
Q Consensus 287 vVIIDD~~~ 295 (484)
+++|+|+..
T Consensus 159 ~~~vGD~~~ 167 (222)
T 2nyv_A 159 ALIVGDTDA 167 (222)
T ss_dssp EEEEESSHH
T ss_pred EEEECCCHH
Confidence 999999864
No 92
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=95.05 E-value=0.034 Score=50.72 Aligned_cols=79 Identities=16% Similarity=0.089 Sum_probs=60.6
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCcE
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESAV 287 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~v 287 (484)
+.+.||+.++|+.+.+. |.++|+|++.+.++..+++.+.-.. +|. .+++.++... + +.+-++++.-+.+.+
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~-~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSG-LFD-HVLSVDAVRLYKTAPAAYALAPRAFGVPAAQI 175 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTT-TCS-EEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGE
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHh-hcC-EEEEecccCCCCcCHHHHHHHHHHhCCCcccE
Confidence 67889999999999876 9999999999999999999887654 674 5776766542 1 223334444567889
Q ss_pred EEEcCChh
Q 041302 288 LILDDTEN 295 (484)
Q Consensus 288 VIIDD~~~ 295 (484)
++|+|+..
T Consensus 176 ~~vGD~~~ 183 (233)
T 3umb_A 176 LFVSSNGW 183 (233)
T ss_dssp EEEESCHH
T ss_pred EEEeCCHH
Confidence 99999864
No 93
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=94.96 E-value=0.026 Score=52.13 Aligned_cols=80 Identities=18% Similarity=0.215 Sum_probs=61.5
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCC------ccccccccCCC-CCc
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQR------HQKGLDVVLGQ-ESA 286 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~------~~KdL~~l~~~-~~~ 286 (484)
+.++||+.++|+.+.+. +.++|+|++.+.++..+++.++-.. +|. .+++.+++... +.+-++.+..+ .+.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~-~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 186 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDR-YFK-YIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDK 186 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG-GCS-EEEEECTTSCCCCHHHHHHHHHHHHTCCCGGG
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHh-hEE-EEEeccccCCCCCCHHHHHHHHHHcCCCCCCc
Confidence 67999999999999876 9999999999999999999887654 775 46667765431 12223444456 889
Q ss_pred EEEEcCChhh
Q 041302 287 VLILDDTENA 296 (484)
Q Consensus 287 vVIIDD~~~v 296 (484)
++.|+|++.-
T Consensus 187 ~i~vGD~~~D 196 (240)
T 3sd7_A 187 VIMVGDRKYD 196 (240)
T ss_dssp EEEEESSHHH
T ss_pred EEEECCCHHH
Confidence 9999998753
No 94
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=94.76 E-value=0.057 Score=50.54 Aligned_cols=79 Identities=11% Similarity=0.105 Sum_probs=59.1
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCcE
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESAV 287 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~v 287 (484)
+.++||+.++|+.+.+. |.+.|.|++.+.++..+++.+.-.. +|. .+++.+++.. + +.+-++.+.-+.+.+
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~-~f~-~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 190 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDH-LFS-EMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQI 190 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCS-EEECTTTSSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchh-eEE-EEEecccCCCCCcCHHHHHHHHHHhCcChhhE
Confidence 57889999999999765 9999999999999999999886543 674 5776665532 1 111233444467789
Q ss_pred EEEcCChh
Q 041302 288 LILDDTEN 295 (484)
Q Consensus 288 VIIDD~~~ 295 (484)
++|+|+..
T Consensus 191 ~~vGD~~~ 198 (243)
T 2hsz_A 191 LFVGDSQN 198 (243)
T ss_dssp EEEESSHH
T ss_pred EEEcCCHH
Confidence 99999864
No 95
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=94.69 E-value=0.036 Score=50.44 Aligned_cols=78 Identities=19% Similarity=0.296 Sum_probs=60.3
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCC------ccccccccCCCCCcEE
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQR------HQKGLDVVLGQESAVL 288 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~------~~KdL~~l~~~~~~vV 288 (484)
+.+.|++.++|+.+.+.|.+.|.|++.+.++..+++.+.-.. +|. .+++.++.... +.+-++.+.-+.+.+|
T Consensus 106 ~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~-~f~-~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~ 183 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDR-YFK-KIILSEDLGVLKPRPEIFHFALSATQSELRESL 183 (240)
T ss_dssp CCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGG-GCS-EEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred CCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHh-hce-eEEEeccCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 678999999999999889999999999999999999886554 674 56666665421 1223444555788999
Q ss_pred EEcCCh
Q 041302 289 ILDDTE 294 (484)
Q Consensus 289 IIDD~~ 294 (484)
.|+|++
T Consensus 184 ~iGD~~ 189 (240)
T 3qnm_A 184 MIGDSW 189 (240)
T ss_dssp EEESCT
T ss_pred EECCCc
Confidence 999995
No 96
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=94.68 E-value=0.042 Score=50.16 Aligned_cols=80 Identities=24% Similarity=0.338 Sum_probs=60.7
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC----CccccccccCCCCCcEEEE
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ----RHQKGLDVVLGQESAVLIL 290 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~----~~~KdL~~l~~~~~~vVII 290 (484)
+.+.||+.++|+.+.+.|.+.|.|++.+.++..+++.++-.. +|. .+++.+...+ .+.+-++++.-+.+.+|+|
T Consensus 83 ~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~-~f~-~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~v 160 (210)
T 2ah5_A 83 AQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHH-FFD-GIYGSSPEAPHKADVIHQALQTHQLAPEQAIII 160 (210)
T ss_dssp CEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGG-GCS-EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchh-hee-eeecCCCCCCCChHHHHHHHHHcCCCcccEEEE
Confidence 578899999999998789999999999999999999887654 785 4666651111 1334455555577889999
Q ss_pred cCChhh
Q 041302 291 DDTENA 296 (484)
Q Consensus 291 DD~~~v 296 (484)
+|++.=
T Consensus 161 gDs~~D 166 (210)
T 2ah5_A 161 GDTKFD 166 (210)
T ss_dssp ESSHHH
T ss_pred CCCHHH
Confidence 998643
No 97
>3oq0_A DBF4, protein DNA52; DDK, BRCT, RAD53, replication checkpoint, FHA domain, regula subunit of DDK, CDC7, phosphorylation, nuclear; 2.70A {Saccharomyces cerevisiae}
Probab=94.66 E-value=0.022 Score=51.06 Aligned_cols=80 Identities=16% Similarity=0.074 Sum_probs=55.9
Q ss_pred cccc-cceeeeeeeccCCCCC-cc-------hHHHHHHHHHhCCeEeeecCCCccEEEEcCCC--------ChHHHHHHh
Q 041302 377 GEVL-KGCKLVFSHVFPTKFP-AD-------THYLWKMAEQLGATCSIELDPSVTHVVSTDAR--------TEKSRWAAK 439 (484)
Q Consensus 377 ~~vL-~G~~IvfSG~~p~~~~-~~-------~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~--------T~K~~~A~~ 439 (484)
++|+ ++.+|+|-..-..... .. +..+.+-...+||+|.+-++.+|||+|+.++. +.=...|.+
T Consensus 18 rkIM~r~s~iYFdt~~~~~~~~~~~~~l~k~~~llkk~f~~LGa~I~~FFd~~VTiIITrR~~~~~~~yp~~DIL~rAr~ 97 (151)
T 3oq0_A 18 GSHMKRDSRIYFDITDDVEMNTYNKSKMDKRRDLLKRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRAKK 97 (151)
T ss_dssp ---CCCCCEEEECCCCSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEESSCCTTCCEEEESSCGGGGGGSCTTSHHHHHHH
T ss_pred HHHhccCCEEEEeCCCcchhhHHHHHHHHHHHHHHHHHHHHcCCEEeeecCCceEEEEeCCcCcccccCCcchHHHHHHH
Confidence 5677 7899999854322211 11 13344666899999999999999999998753 334578889
Q ss_pred cCCeeeChhhHHHHHHh
Q 041302 440 EAKFLVDPRWIETANFL 456 (484)
Q Consensus 440 ~gi~IV~~~WL~~c~~~ 456 (484)
.|++|=+.+=|..=+..
T Consensus 98 ~~mKIWs~EKl~RfL~~ 114 (151)
T 3oq0_A 98 NYMKVWSYEKAARFLKN 114 (151)
T ss_dssp TTCEEEEHHHHHHHHHT
T ss_pred cCCeeecHHHHHHHHHh
Confidence 99999888888766554
No 98
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=94.59 E-value=0.1 Score=46.47 Aligned_cols=97 Identities=14% Similarity=0.193 Sum_probs=58.8
Q ss_pred ccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhh-CCeEEEecCCc
Q 041302 163 KLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASE-MFEMYIYTMGD 241 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~-~yEl~IyT~g~ 241 (484)
...+++||||||+..... .+ ...-|++.+.|+.+.+ -+.++|+|.-+
T Consensus 3 ~k~i~~DlDGTL~~~~~~-~i-------------------------------~~~~~~~~~al~~l~~~G~~iii~TgR~ 50 (142)
T 2obb_A 3 AMTIAVDFDGTIVEHRYP-RI-------------------------------GEEIPFAVETLKLLQQEKHRLILWSVRE 50 (142)
T ss_dssp CCEEEECCBTTTBCSCTT-SC-------------------------------CCBCTTHHHHHHHHHHTTCEEEECCSCC
T ss_pred CeEEEEECcCCCCCCCCc-cc-------------------------------cccCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 357899999999984320 00 0134789999999965 59999999988
Q ss_pred HhHHHHHHhhhCCCCcccceeEEeecCCCCCccccccccCCCCCcEEEEcCChh
Q 041302 242 RPYALEMAKLLDPSREYFNARVISRDDGTQRHQKGLDVVLGQESAVLILDDTEN 295 (484)
Q Consensus 242 r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~~~KdL~~l~~~~~~vVIIDD~~~ 295 (484)
......+...++..|.-+ . +++-+. + ...|-.....+.....++||||..
T Consensus 51 ~~~~~~~~~~l~~~gi~~-~-~I~~n~-P-~~~~~~~~~~rK~~~~~fIDDR~~ 100 (142)
T 2obb_A 51 GELLDEAIEWCRARGLEF-Y-AANKDY-P-EEERDHQGFSRKLKADLFIDDRNV 100 (142)
T ss_dssp HHHHHHHHHHHHTTTCCC-S-EESSSS-T-TC---CCSCCSSCCCSEEECTTST
T ss_pred cccHHHHHHHHHHcCCCe-E-EEEcCC-c-hhhhcchhhcCCcCCCEEeecccc
Confidence 666777788787766322 2 221111 1 011100012223456677999863
No 99
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=94.55 E-value=0.044 Score=49.74 Aligned_cols=81 Identities=16% Similarity=0.060 Sum_probs=60.6
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCC------ccccccccCCCCCcE
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQR------HQKGLDVVLGQESAV 287 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~------~~KdL~~l~~~~~~v 287 (484)
+.+.|++.++|+.+.+. +.++|+|++.+.++..+++.+.-.. +|. .+++.++.... +.+-++.+.-+.+.+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~-~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~ 167 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDI-NKI-NIVTRDDVSYGKPDPDLFLAAAKKIGAPIDEC 167 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCT-TSS-CEECGGGSSCCTTSTHHHHHHHHHTTCCGGGE
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhh-hhh-eeeccccCCCCCCChHHHHHHHHHhCCCHHHE
Confidence 67899999999999876 9999999999999999999876654 674 46666554321 122334444567889
Q ss_pred EEEcCChhhh
Q 041302 288 LILDDTENAW 297 (484)
Q Consensus 288 VIIDD~~~vw 297 (484)
+.|+|+..-.
T Consensus 168 i~iGD~~~Di 177 (233)
T 3s6j_A 168 LVIGDAIWDM 177 (233)
T ss_dssp EEEESSHHHH
T ss_pred EEEeCCHHhH
Confidence 9999987544
No 100
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=94.53 E-value=0.1 Score=51.13 Aligned_cols=113 Identities=16% Similarity=0.169 Sum_probs=65.0
Q ss_pred cCccEEEEcCCCceeeeccC--------CCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhh-C
Q 041302 161 HRKLYLILDLDHTLLNSTLL--------LHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASE-M 231 (484)
Q Consensus 161 ~rKL~LVLDLDeTLIhs~~~--------~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~-~ 231 (484)
.+|..+|||+|+||+..... ...++..|. .+. ..-...+-||+.+||+.|.+ -
T Consensus 56 g~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~---------------~wv---~~g~~~~~pg~~ell~~L~~~G 117 (260)
T 3pct_A 56 GKKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWT---------------KWV---DARQSAAIPGAVEFSNYVNANG 117 (260)
T ss_dssp --CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHH---------------HHH---HTTCCEECTTHHHHHHHHHHTT
T ss_pred CCCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHH---------------HHH---HcCCCCCCccHHHHHHHHHHCC
Confidence 34569999999999977631 011110000 000 01136788999999999965 5
Q ss_pred CeEEEecCCcHh----HHHHHHhhhCCCCcccceeEEeecCCCCCcccc--ccccCC-CCCcEEEEcCChh
Q 041302 232 FEMYIYTMGDRP----YALEMAKLLDPSREYFNARVISRDDGTQRHQKG--LDVVLG-QESAVLILDDTEN 295 (484)
Q Consensus 232 yEl~IyT~g~r~----YA~~I~~~LDP~~~~F~~RI~sRd~c~~~~~Kd--L~~l~~-~~~~vVIIDD~~~ 295 (484)
+.|+|.|+-... -+..-++.+.-.. ++...++-|..... |. +..|.. +.+.++.|.|...
T Consensus 118 ~~i~ivTgR~~~~~r~~T~~~L~~lGi~~-~~~~~Lilr~~~~~---K~~~r~~L~~~gy~iv~~iGD~~~ 184 (260)
T 3pct_A 118 GTMFFVSNRRDDVEKAGTVDDMKRLGFTG-VNDKTLLLKKDKSN---KSVRFKQVEDMGYDIVLFVGDNLN 184 (260)
T ss_dssp CEEEEEEEEETTTSHHHHHHHHHHHTCCC-CSTTTEEEESSCSS---SHHHHHHHHTTTCEEEEEEESSGG
T ss_pred CeEEEEeCCCccccHHHHHHHHHHcCcCc-cccceeEecCCCCC---hHHHHHHHHhcCCCEEEEECCChH
Confidence 999999988654 5555555554432 23224555654322 22 111222 4566888988744
No 101
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=94.50 E-value=0.044 Score=49.94 Aligned_cols=82 Identities=13% Similarity=0.161 Sum_probs=61.7
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCC------ccccccccC-CCCCcE
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQR------HQKGLDVVL-GQESAV 287 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~------~~KdL~~l~-~~~~~v 287 (484)
+.+.||+.++|+.+.+.|.+.|.|++.+.++..+++.+.-.. +|. .+++.++.... +.+-++++. -+.+.+
T Consensus 102 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~-~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~ 179 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFP-FFK-DIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHT 179 (238)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCGG-GCS-EEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGE
T ss_pred CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChHh-hhh-eEEEecccCCCCCChHHHHHHHHHcCCCChhHe
Confidence 578999999999998779999999999999999999886544 674 46666655321 222344555 577899
Q ss_pred EEEcCCh--hhhh
Q 041302 288 LILDDTE--NAWT 298 (484)
Q Consensus 288 VIIDD~~--~vw~ 298 (484)
++|+|+. ++-.
T Consensus 180 i~vGD~~~~Di~~ 192 (238)
T 3ed5_A 180 LIIGDSLTADIKG 192 (238)
T ss_dssp EEEESCTTTTHHH
T ss_pred EEECCCcHHHHHH
Confidence 9999986 4543
No 102
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=94.48 E-value=0.042 Score=49.88 Aligned_cols=79 Identities=16% Similarity=0.111 Sum_probs=59.6
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCcE
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESAV 287 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~v 287 (484)
+...|++.++|+.+.+. |.++|+|++.+.++..+++.+.-.. +|. .+++.++... + +.+-++.+.-+.+.+
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~-~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 172 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTN-SFD-HLISVDEVRLFKPHQKVYELAMDTLHLGESEI 172 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGG-GCS-EEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChh-hcc-eeEehhhcccCCCChHHHHHHHHHhCCCcccE
Confidence 56789999999999876 9999999999999999999876544 674 5676666542 1 122234444467889
Q ss_pred EEEcCChh
Q 041302 288 LILDDTEN 295 (484)
Q Consensus 288 VIIDD~~~ 295 (484)
++|+|+..
T Consensus 173 ~~iGD~~~ 180 (230)
T 3um9_A 173 LFVSCNSW 180 (230)
T ss_dssp EEEESCHH
T ss_pred EEEeCCHH
Confidence 99999874
No 103
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=94.46 E-value=0.032 Score=51.74 Aligned_cols=82 Identities=21% Similarity=0.233 Sum_probs=60.5
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCcE
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESAV 287 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~v 287 (484)
+.+.||+.++|+.+.+. |.++|.|++.+.++..+++.+.-.. +|. .+++.++... + +.+-++++.-+.+.+
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~-~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~ 170 (241)
T 2hoq_A 93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDD-FFE-HVIISDFEGVKKPHPKIFKKALKAFNVKPEEA 170 (241)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGG-GCS-EEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHh-hcc-EEEEeCCCCCCCCCHHHHHHHHHHcCCCcccE
Confidence 56789999999999875 9999999999999999999887554 774 4666665432 1 122234444467889
Q ss_pred EEEcCCh--hhhh
Q 041302 288 LILDDTE--NAWT 298 (484)
Q Consensus 288 VIIDD~~--~vw~ 298 (484)
+.|+|+. ++-.
T Consensus 171 i~iGD~~~~Di~~ 183 (241)
T 2hoq_A 171 LMVGDRLYSDIYG 183 (241)
T ss_dssp EEEESCTTTTHHH
T ss_pred EEECCCchHhHHH
Confidence 9999986 4543
No 104
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=94.44 E-value=0.045 Score=50.96 Aligned_cols=79 Identities=13% Similarity=0.145 Sum_probs=60.3
Q ss_pred EEEecccHHHHHHHhhh-CCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCc
Q 041302 214 MTKLRPFVHTFLKEASE-MFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESA 286 (484)
Q Consensus 214 ~vklRPgl~eFL~~ls~-~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~ 286 (484)
.+.+.||+.++|+.+.+ .|.+.|.|++.+.++..+++.+... +|. .+++.++... + +.+-++++.-+.+.
T Consensus 108 ~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~--~f~-~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~ 184 (240)
T 2hi0_A 108 KTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG--SFD-FALGEKSGIRRKPAPDMTSECVKVLGVPRDK 184 (240)
T ss_dssp SCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT--TCS-EEEEECTTSCCTTSSHHHHHHHHHHTCCGGG
T ss_pred cCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc--cee-EEEecCCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence 35788999999999975 4999999999999999999988764 674 5777766432 1 23334455557788
Q ss_pred EEEEcCChh
Q 041302 287 VLILDDTEN 295 (484)
Q Consensus 287 vVIIDD~~~ 295 (484)
+|+|+|++.
T Consensus 185 ~~~vGDs~~ 193 (240)
T 2hi0_A 185 CVYIGDSEI 193 (240)
T ss_dssp EEEEESSHH
T ss_pred eEEEcCCHH
Confidence 999999864
No 105
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=94.40 E-value=0.047 Score=49.97 Aligned_cols=79 Identities=14% Similarity=0.045 Sum_probs=58.7
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCcE
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESAV 287 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~v 287 (484)
+.+.||+.++|+.+.+. |.++|.|++.+.++..+++.++-.. +|. .+++.++... + +.+-++.+.-+.+.+
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~-~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 171 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD-GFD-HLLSVDPVQVYKPDNRVYELAEQALGLDRSAI 171 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCS-EEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHh-hhh-eEEEecccCCCCCCHHHHHHHHHHcCCCcccE
Confidence 57889999999999765 9999999999999999999877644 674 4666665432 1 122234444467789
Q ss_pred EEEcCChh
Q 041302 288 LILDDTEN 295 (484)
Q Consensus 288 VIIDD~~~ 295 (484)
++|+|+..
T Consensus 172 ~~iGD~~~ 179 (232)
T 1zrn_A 172 LFVASNAW 179 (232)
T ss_dssp EEEESCHH
T ss_pred EEEeCCHH
Confidence 99999873
No 106
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=94.22 E-value=0.036 Score=50.34 Aligned_cols=81 Identities=10% Similarity=0.206 Sum_probs=60.7
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCC------ccccccccCCCCCcE
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQR------HQKGLDVVLGQESAV 287 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~------~~KdL~~l~~~~~~v 287 (484)
+.+.||+.++|+.+.+. |.+.|+|++.+.++..+++.+.-.. +|. .+++.++.... +.+-++++.-+.+.+
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~-~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 162 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAF-YFD-AIVGSSLDGKLSTKEDVIRYAMESLNIKSDDA 162 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGG-GCS-EEEEECTTSSSCSHHHHHHHHHHHHTCCGGGE
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHh-hee-eeeccCCCCCCCCCHHHHHHHHHHhCcCcccE
Confidence 57899999999999876 9999999999999999999877654 675 46667665421 122234444466799
Q ss_pred EEEcCChhhh
Q 041302 288 LILDDTENAW 297 (484)
Q Consensus 288 VIIDD~~~vw 297 (484)
+.|+|+..-.
T Consensus 163 i~iGD~~~Di 172 (226)
T 3mc1_A 163 IMIGDREYDV 172 (226)
T ss_dssp EEEESSHHHH
T ss_pred EEECCCHHHH
Confidence 9999987533
No 107
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=94.13 E-value=0.052 Score=49.70 Aligned_cols=79 Identities=15% Similarity=0.035 Sum_probs=59.8
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCC------ccccccccCCCCCcE
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQR------HQKGLDVVLGQESAV 287 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~------~~KdL~~l~~~~~~v 287 (484)
+.+.||+.++|+.+.+. +.++|.|++.+.++..+++.+.-.. +|. .+++.++.... +.+-++++.-+.+.+
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~-~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~ 180 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDT-RLT-VIAGDDSVERGKPHPDMALHVARGLGIPPERC 180 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGG-TCS-EEECTTTSSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchh-hee-eEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 45899999999999876 9999999999999999999887544 674 46666664321 122344444577889
Q ss_pred EEEcCChh
Q 041302 288 LILDDTEN 295 (484)
Q Consensus 288 VIIDD~~~ 295 (484)
+.|+|+..
T Consensus 181 i~vGD~~~ 188 (237)
T 4ex6_A 181 VVIGDGVP 188 (237)
T ss_dssp EEEESSHH
T ss_pred EEEcCCHH
Confidence 99999874
No 108
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=94.13 E-value=0.054 Score=50.02 Aligned_cols=79 Identities=15% Similarity=0.080 Sum_probs=58.8
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCcE
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESAV 287 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~v 287 (484)
+.+.||+.++|+.+.+. |.+.|.|++.+.++..+++.++-.. +|. .+++.++... + +.+-++++.-+.+.+
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~-~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 181 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDR-VLD-SCLSADDLKIYKPDPRIYQFACDRLGVNPNEV 181 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCS-EEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHH-HcC-EEEEccccCCCCCCHHHHHHHHHHcCCCcccE
Confidence 46789999999999765 9999999999999999999876654 674 4666665432 1 122234444567789
Q ss_pred EEEcCChh
Q 041302 288 LILDDTEN 295 (484)
Q Consensus 288 VIIDD~~~ 295 (484)
+.|+|+..
T Consensus 182 ~~iGD~~~ 189 (240)
T 2no4_A 182 CFVSSNAW 189 (240)
T ss_dssp EEEESCHH
T ss_pred EEEeCCHH
Confidence 99999864
No 109
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=94.08 E-value=0.053 Score=50.93 Aligned_cols=113 Identities=13% Similarity=0.098 Sum_probs=67.8
Q ss_pred ccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhh-CCeEEEecCCc
Q 041302 163 KLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASE-MFEMYIYTMGD 241 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~-~yEl~IyT~g~ 241 (484)
-..+++||||||+.+... +.. . .. ......+++++ +|+.|.+ .+.+.|.|+..
T Consensus 49 ik~viFDlDGTL~Ds~~~--~~~-------------~---~~------~~~~~~~~d~~--~L~~L~~~G~~l~I~T~~~ 102 (211)
T 3ij5_A 49 IRLLICDVDGVMSDGLIY--MGN-------------Q---GE------ELKAFNVRDGY--GIRCLITSDIDVAIITGRR 102 (211)
T ss_dssp CSEEEECCTTTTSSSEEE--EET-------------T---SC------EEEEEEHHHHH--HHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEeCCCCEECCHHH--Hhh-------------h---hH------HHHHhccchHH--HHHHHHHCCCEEEEEeCCC
Confidence 358999999999987531 000 0 00 00123344555 8888865 59999999999
Q ss_pred HhHHHHHHhhhCCCCcccceeEEeecCCCC--CccccccccCCCCCcEEEEcCChhhhhcCCCCeEEec
Q 041302 242 RPYALEMAKLLDPSREYFNARVISRDDGTQ--RHQKGLDVVLGQESAVLILDDTENAWTKHRDNLILME 308 (484)
Q Consensus 242 r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~~~KdL~~l~~~~~~vVIIDD~~~vw~~~~~NlI~I~ 308 (484)
+..|..+++.+.-.. +|... ..+ ...+-++.+.-+.+.++.|.|+..=...-....+.+.
T Consensus 103 ~~~~~~~l~~lgi~~-~f~~~------k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a 164 (211)
T 3ij5_A 103 AKLLEDRANTLGITH-LYQGQ------SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVA 164 (211)
T ss_dssp CHHHHHHHHHHTCCE-EECSC------SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEE
T ss_pred HHHHHHHHHHcCCch-hhccc------CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEE
Confidence 999999999987654 55321 111 1111223333467789999997653332223445443
No 110
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=94.03 E-value=0.043 Score=53.82 Aligned_cols=116 Identities=13% Similarity=0.109 Sum_probs=66.7
Q ss_pred hcCccEEEEcCCCceeeeccC--------CCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhh-
Q 041302 160 RHRKLYLILDLDHTLLNSTLL--------LHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASE- 230 (484)
Q Consensus 160 ~~rKL~LVLDLDeTLIhs~~~--------~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~- 230 (484)
..+|..+|||+|+||+..... .......+. .|. ..-....-||+.+||+.|.+
T Consensus 55 ~~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~---------------~wv---~~~~~~~~pG~~ell~~L~~~ 116 (262)
T 3ocu_A 55 KGKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWT---------------RWV---DARQSRAVPGAVEFNNYVNSH 116 (262)
T ss_dssp TTCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHH---------------HHH---HHTCCEECTTHHHHHHHHHHT
T ss_pred CCCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHH---------------HHH---HcCCCCCCccHHHHHHHHHHC
Confidence 356789999999999977631 001110000 000 01236788999999999965
Q ss_pred CCeEEEecCCcHh----HHHHHHhhhCCCCcccceeEEeecCCCCCccccc--cccC-CCCCcEEEEcCChhhh
Q 041302 231 MFEMYIYTMGDRP----YALEMAKLLDPSREYFNARVISRDDGTQRHQKGL--DVVL-GQESAVLILDDTENAW 297 (484)
Q Consensus 231 ~yEl~IyT~g~r~----YA~~I~~~LDP~~~~F~~RI~sRd~c~~~~~KdL--~~l~-~~~~~vVIIDD~~~vw 297 (484)
-+.|+|-|+.+.. .+..-++.+.-.. ++...|+-|..... |.- ..|. .+.+.|+.|.|...=+
T Consensus 117 G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~-~~~~~Lilr~~~~~---K~~~r~~l~~~Gy~iv~~vGD~~~Dl 186 (262)
T 3ocu_A 117 NGKVFYVTNRKDSTEKSGTIDDMKRLGFNG-VEESAFYLKKDKSA---KAARFAEIEKQGYEIVLYVGDNLDDF 186 (262)
T ss_dssp TEEEEEEEEEETTTTHHHHHHHHHHHTCSC-CSGGGEEEESSCSC---CHHHHHHHHHTTEEEEEEEESSGGGG
T ss_pred CCeEEEEeCCCccchHHHHHHHHHHcCcCc-ccccceeccCCCCC---hHHHHHHHHhcCCCEEEEECCChHHh
Confidence 5999999987654 5555555554322 23225666765432 221 1121 1245688888875433
No 111
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=93.87 E-value=0.038 Score=49.76 Aligned_cols=82 Identities=6% Similarity=0.065 Sum_probs=59.1
Q ss_pred EEEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhh------hCCCCcccceeEEeecCCC--CC----ccccccccC
Q 041302 214 MTKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKL------LDPSREYFNARVISRDDGT--QR----HQKGLDVVL 281 (484)
Q Consensus 214 ~vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~------LDP~~~~F~~RI~sRd~c~--~~----~~KdL~~l~ 281 (484)
++.+.||+.++|+.+.+.|.++|.|++.+.++..+++. +.-. .+|. .+++.+++. ++ +.+-++++.
T Consensus 87 ~~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~-~~f~-~~~~~~~~~~~Kp~~~~~~~~~~~~~ 164 (211)
T 2i6x_A 87 LEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLD-SFFD-KVYASCQMGKYKPNEDIFLEMIADSG 164 (211)
T ss_dssp EEEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGG-GGSS-EEEEHHHHTCCTTSHHHHHHHHHHHC
T ss_pred hcccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHH-HHcC-eEEeecccCCCCCCHHHHHHHHHHhC
Confidence 56889999999999988899999999999999988876 3433 3674 466555432 11 122234444
Q ss_pred CCCCcEEEEcCChhhh
Q 041302 282 GQESAVLILDDTENAW 297 (484)
Q Consensus 282 ~~~~~vVIIDD~~~vw 297 (484)
-+.+.+++|+|++.-.
T Consensus 165 ~~~~~~~~igD~~~Di 180 (211)
T 2i6x_A 165 MKPEETLFIDDGPANV 180 (211)
T ss_dssp CCGGGEEEECSCHHHH
T ss_pred CChHHeEEeCCCHHHH
Confidence 4678899999987644
No 112
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=93.72 E-value=0.089 Score=47.80 Aligned_cols=82 Identities=21% Similarity=0.137 Sum_probs=59.2
Q ss_pred EEEecccHHHHHHHhhhC--CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCCc-------cccccccC--C
Q 041302 214 MTKLRPFVHTFLKEASEM--FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQRH-------QKGLDVVL--G 282 (484)
Q Consensus 214 ~vklRPgl~eFL~~ls~~--yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~~-------~KdL~~l~--~ 282 (484)
.+.+.||+.++|+.+.+. +.+.|+|++.+.++..+++.+.... +|.. +++.++..... .+-++++. -
T Consensus 91 ~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~~~k~~~~~~~~~~~~lg~~~ 168 (234)
T 2hcf_A 91 DITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH-YFPF-GAFADDALDRNELPHIALERARRMTGANY 168 (234)
T ss_dssp GEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST-TCSC-EECTTTCSSGGGHHHHHHHHHHHHHCCCC
T ss_pred CCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchh-hcCc-ceecCCCcCccchHHHHHHHHHHHhCCCC
Confidence 367899999999999886 9999999999999999999887655 6754 44444432110 11123344 3
Q ss_pred CCCcEEEEcCChhhh
Q 041302 283 QESAVLILDDTENAW 297 (484)
Q Consensus 283 ~~~~vVIIDD~~~vw 297 (484)
+.+.+++|+|++.=.
T Consensus 169 ~~~~~i~iGD~~~Di 183 (234)
T 2hcf_A 169 SPSQIVIIGDTEHDI 183 (234)
T ss_dssp CGGGEEEEESSHHHH
T ss_pred CcccEEEECCCHHHH
Confidence 677899999987533
No 113
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=93.71 E-value=0.045 Score=51.16 Aligned_cols=83 Identities=5% Similarity=-0.115 Sum_probs=61.6
Q ss_pred EEEecccHHHHHHHhhh-CCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCC-CC------ccccccccCCCCC
Q 041302 214 MTKLRPFVHTFLKEASE-MFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGT-QR------HQKGLDVVLGQES 285 (484)
Q Consensus 214 ~vklRPgl~eFL~~ls~-~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~-~~------~~KdL~~l~~~~~ 285 (484)
.+.+.||+.++|+.+.+ .|.++|+|++.+.++..+++.+.-.. +|...+++.++.. .. +.+-++++.-+.+
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~ 186 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTE-LAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPE 186 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHH-HHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGG
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHh-hccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHH
Confidence 36789999999999976 59999999999999999999886543 6765466666543 21 1222344444678
Q ss_pred cEEEEcCChhhh
Q 041302 286 AVLILDDTENAW 297 (484)
Q Consensus 286 ~vVIIDD~~~vw 297 (484)
.++.|+|+..-.
T Consensus 187 ~~i~iGD~~~Di 198 (259)
T 4eek_A 187 RCVVIEDSVTGG 198 (259)
T ss_dssp GEEEEESSHHHH
T ss_pred HEEEEcCCHHHH
Confidence 899999987533
No 114
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=93.60 E-value=0.045 Score=50.39 Aligned_cols=79 Identities=11% Similarity=0.127 Sum_probs=58.1
Q ss_pred EecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhh---CCCC--cccceeEEeecCCCC--C----ccccccccCCCC
Q 041302 216 KLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLL---DPSR--EYFNARVISRDDGTQ--R----HQKGLDVVLGQE 284 (484)
Q Consensus 216 klRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~L---DP~~--~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~ 284 (484)
.+.||+.++|+.+.+.|.+.|.|++.+.++..+++.| ...+ .+|. .+++.+++.. + +.+-++++.-+.
T Consensus 112 ~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd-~i~~~~~~~~~KP~~~~~~~~~~~~g~~~ 190 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFE-KTYLSYEMKMAKPEPEIFKAVTEDAGIDP 190 (229)
T ss_dssp CCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCS-EEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred hccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhCC-EEEeecccCCCCCCHHHHHHHHHHcCCCH
Confidence 4679999999999888999999999999999888766 4433 2564 4666655432 1 233344555577
Q ss_pred CcEEEEcCChh
Q 041302 285 SAVLILDDTEN 295 (484)
Q Consensus 285 ~~vVIIDD~~~ 295 (484)
+.+|+|+|++.
T Consensus 191 ~~~~~vGD~~~ 201 (229)
T 4dcc_A 191 KETFFIDDSEI 201 (229)
T ss_dssp GGEEEECSCHH
T ss_pred HHeEEECCCHH
Confidence 88999999874
No 115
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=93.53 E-value=0.078 Score=50.82 Aligned_cols=79 Identities=15% Similarity=0.100 Sum_probs=58.1
Q ss_pred EEecccHHHHHHHhhh-CCeEEEecCCcHhHHHHHHhhhCC--CCcccceeEEeecCCCC-C----ccccccccCCCCCc
Q 041302 215 TKLRPFVHTFLKEASE-MFEMYIYTMGDRPYALEMAKLLDP--SREYFNARVISRDDGTQ-R----HQKGLDVVLGQESA 286 (484)
Q Consensus 215 vklRPgl~eFL~~ls~-~yEl~IyT~g~r~YA~~I~~~LDP--~~~~F~~RI~sRd~c~~-~----~~KdL~~l~~~~~~ 286 (484)
+.+.||+.++|+.|.+ .|.+.|.|++.+.++..+++.++- =..+|. .+++. +... + +.+-++++....+.
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd-~i~~~-~~~~KP~p~~~~~~~~~lg~~p~~ 206 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVD-GHFDT-KIGHKVESESYRKIADSIGCSTNN 206 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCS-EEECG-GGCCTTCHHHHHHHHHHHTSCGGG
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhcc-EEEec-CCCCCCCHHHHHHHHHHhCcCccc
Confidence 6789999999999964 699999999999999999886541 234785 46665 4321 1 23344555556788
Q ss_pred EEEEcCChh
Q 041302 287 VLILDDTEN 295 (484)
Q Consensus 287 vVIIDD~~~ 295 (484)
+|+|+|+..
T Consensus 207 ~l~VgDs~~ 215 (261)
T 1yns_A 207 ILFLTDVTR 215 (261)
T ss_dssp EEEEESCHH
T ss_pred EEEEcCCHH
Confidence 999999854
No 116
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=93.51 E-value=0.081 Score=49.29 Aligned_cols=89 Identities=9% Similarity=0.133 Sum_probs=58.6
Q ss_pred EEecccHHHHHHHhhh-CCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCC----------CCC--c--c-----
Q 041302 215 TKLRPFVHTFLKEASE-MFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDG----------TQR--H--Q----- 274 (484)
Q Consensus 215 vklRPgl~eFL~~ls~-~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c----------~~~--~--~----- 274 (484)
+.++||+.++|+.+.+ .|.++|.|++.+.++..+++-|.+ | +.|++.+.. ..+ . .
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~~l~~----~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~ 150 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVE----K-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGC 150 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSC----G-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSS
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHhcCCC----C-CeEEeeeeEEcCCceEEecCCCCccccccccCC
Confidence 6789999999999975 599999999999999999984432 2 335544321 111 1 1
Q ss_pred ---ccccccCCCCCcEEEEcCChhhhhcCCCCeEEec
Q 041302 275 ---KGLDVVLGQESAVLILDDTENAWTKHRDNLILME 308 (484)
Q Consensus 275 ---KdL~~l~~~~~~vVIIDD~~~vw~~~~~NlI~I~ 308 (484)
+-++++..+.+.+++|+|+..-...-...++.+.
T Consensus 151 ~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~ 187 (236)
T 2fea_A 151 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 187 (236)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred cHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeee
Confidence 3445555567889999998643322223344443
No 117
>3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A*
Probab=93.49 E-value=0.075 Score=50.64 Aligned_cols=89 Identities=10% Similarity=0.174 Sum_probs=57.6
Q ss_pred hhcccccceeeeeeeccCCCCCcchHHHHHHHHHhCCeEeee--cC--------CCccEEEEcCCCC---hHHHHHHh--
Q 041302 375 VRGEVLKGCKLVFSHVFPTKFPADTHYLWKMAEQLGATCSIE--LD--------PSVTHVVSTDART---EKSRWAAK-- 439 (484)
Q Consensus 375 lr~~vL~G~~IvfSG~~p~~~~~~~~~l~~la~~lGA~v~~~--i~--------~~vTHlVa~~~~T---~K~~~A~~-- 439 (484)
-+.++|+|+.|++++-+-. .|....+..+++..||+|... +. +.-.+||+..... .+++....
T Consensus 109 ~~~~LF~G~~f~it~~~~~--~p~~~~l~~iI~~~GG~v~~~p~~~~~~~~~~~~~~~~vis~~~d~~~~~~f~~~~~~~ 186 (220)
T 3l41_A 109 QGPSLLEDYVVYLTSKTVA--PENVPAVISIVKSNGGVCSTLNVYNKRLARHLEDGNVVLITCNEDSHIWTNFLDNASQN 186 (220)
T ss_dssp HCSCTTTTSEEEEETTSSC--GGGHHHHHHHHHHTTCEEEEECSCCHHHHHHHHHCCEEEEECGGGHHHHTTTHHHHTTC
T ss_pred cCchhhhheeEEEeccccC--CCCCceEEEEEecCCcEechhhHHHHHHHHhcccCCEEEEEeCCcchHHHHhhcccccc
Confidence 3579999999999875410 245678999999999999871 10 1124666662211 12222222
Q ss_pred cCCeeeChhhHHHHHHhcCCCCCCCC
Q 041302 440 EAKFLVDPRWIETANFLWQRQPEENF 465 (484)
Q Consensus 440 ~gi~IV~~~WL~~c~~~w~r~dE~~Y 465 (484)
.+++||+++||..++.+.+---+..+
T Consensus 187 ~~~~i~~~e~ll~~il~q~l~~~~~~ 212 (220)
T 3l41_A 187 KTIFLQNYDWLIKTVLRQEIDVNDRI 212 (220)
T ss_dssp TTEEEEEHHHHHHHHHHTCCCTTCCB
T ss_pred ceEEEechhHHHHHHHHHHcCcchHH
Confidence 35679999999999987665444443
No 118
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=93.37 E-value=0.051 Score=48.82 Aligned_cols=77 Identities=19% Similarity=0.172 Sum_probs=56.5
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCcEE
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESAVL 288 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~vV 288 (484)
+.+.||+.+ |+.+.+.|.+.|.|++.+.++..+++.+.-.. +|. .+++.+++.. + +.+-++.+. .+.++
T Consensus 73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~-~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~ 147 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLR-YFK-GIFSAESVKEYKPSPKVYKYFLDSIG--AKEAF 147 (201)
T ss_dssp CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGG-GCS-EEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCE
T ss_pred cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHH-hCc-EEEehhhcCCCCCCHHHHHHHHHhcC--CCcEE
Confidence 578899999 99996559999999999999999999887654 674 4776665432 1 122233333 67889
Q ss_pred EEcCChhh
Q 041302 289 ILDDTENA 296 (484)
Q Consensus 289 IIDD~~~v 296 (484)
+|+|++.-
T Consensus 148 ~vGD~~~D 155 (201)
T 2w43_A 148 LVSSNAFD 155 (201)
T ss_dssp EEESCHHH
T ss_pred EEeCCHHH
Confidence 99998753
No 119
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=93.36 E-value=0.21 Score=48.35 Aligned_cols=73 Identities=14% Similarity=0.180 Sum_probs=54.6
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCCccccccccCCCCCcEEEEcCC
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQRHQKGLDVVLGQESAVLILDDT 293 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~~~KdL~~l~~~~~~vVIIDD~ 293 (484)
..++||+.++|+.|.+. +.+.|.|++.+.++..+++.+.-.. +|.. ++ +....+-++.+... +.+++|.|+
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~-i~-----~~~K~~~~~~l~~~-~~~~~vGDs 233 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-VIAE-VL-----PHQKSEEVKKLQAK-EVVAFVGDG 233 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-EECS-CC-----TTCHHHHHHHHTTT-CCEEEEECT
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce-eeee-cC-----hHHHHHHHHHHhcC-CeEEEEECC
Confidence 56899999999999765 9999999999999999999886543 5542 32 11223344555556 889999997
Q ss_pred hh
Q 041302 294 EN 295 (484)
Q Consensus 294 ~~ 295 (484)
..
T Consensus 234 ~~ 235 (287)
T 3a1c_A 234 IN 235 (287)
T ss_dssp TT
T ss_pred HH
Confidence 63
No 120
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=93.36 E-value=0.049 Score=49.55 Aligned_cols=82 Identities=15% Similarity=0.166 Sum_probs=60.8
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCcEE
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESAVL 288 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~vV 288 (484)
+.+.|++.++|+.+.+.|.+.|+|++.+.++..+++.+.-.. +|. .+++.+++.. + +.+-++.+.-+.+.++
T Consensus 99 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~-~f~-~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 176 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKD-LFD-SITTSEEAGFFKPHPRIFELALKKAGVKGEEAV 176 (234)
T ss_dssp CCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGG-GCS-EEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred CCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHH-Hcc-eeEeccccCCCCcCHHHHHHHHHHcCCCchhEE
Confidence 568899999999998779999999999999999999876644 675 4666654331 1 2223344445778899
Q ss_pred EEcCCh--hhhh
Q 041302 289 ILDDTE--NAWT 298 (484)
Q Consensus 289 IIDD~~--~vw~ 298 (484)
.|+|+. |+-.
T Consensus 177 ~vGD~~~~Di~~ 188 (234)
T 3u26_A 177 YVGDNPVKDCGG 188 (234)
T ss_dssp EEESCTTTTHHH
T ss_pred EEcCCcHHHHHH
Confidence 999996 4544
No 121
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=93.32 E-value=0.08 Score=49.53 Aligned_cols=78 Identities=17% Similarity=0.069 Sum_probs=58.9
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCcEE
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESAVL 288 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~vV 288 (484)
+.+.||+.++|+.+. .|.+.|.|++.+.++..+++.++-.. +|. .+++.++... + +.+-++++..+.+.++
T Consensus 92 ~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~~gl~~-~f~-~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 168 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVANAGLTD-SFD-AVISVDAKRVFKPHPDSYALVEEVLGVTPAEVL 168 (253)
T ss_dssp CCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHHTTCGG-GCS-EEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEE
T ss_pred CCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHHCCchh-hcc-EEEEccccCCCCCCHHHHHHHHHHcCCCHHHEE
Confidence 568899999999999 99999999999999999999876543 675 4666665432 1 2223344445677899
Q ss_pred EEcCChh
Q 041302 289 ILDDTEN 295 (484)
Q Consensus 289 IIDD~~~ 295 (484)
+|+|+..
T Consensus 169 ~vGD~~~ 175 (253)
T 1qq5_A 169 FVSSNGF 175 (253)
T ss_dssp EEESCHH
T ss_pred EEeCChh
Confidence 9999864
No 122
>3oq4_A DBF4, protein DNA52; DDK, BRCT, RAD53, replication checkpoint, FHA domain, regula subunit of DDK, CDC7, phosphorylation, nuclear; 2.40A {Saccharomyces cerevisiae}
Probab=93.30 E-value=0.13 Score=45.35 Aligned_cols=75 Identities=16% Similarity=0.030 Sum_probs=54.2
Q ss_pred ceeeeeeeccCCCCC--------cchHHHHHHHHHhCCeEeeecCCCccEEEEcCCC--------ChHHHHHHhcCCeee
Q 041302 382 GCKLVFSHVFPTKFP--------ADTHYLWKMAEQLGATCSIELDPSVTHVVSTDAR--------TEKSRWAAKEAKFLV 445 (484)
Q Consensus 382 G~~IvfSG~~p~~~~--------~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~--------T~K~~~A~~~gi~IV 445 (484)
..+|+|-+.-+.... -....+.+-...+||+|..-++.+|||+|+.++. +.=...|.+.|++|=
T Consensus 7 ~s~iyfd~~~~~~~~~~~~~k~~k~~~llk~~f~~LGa~I~~FFd~~VTiiITrR~~~~~~~~p~~DIL~rAr~~~mKIW 86 (134)
T 3oq4_A 7 DSRIYFDITDDVEMNTYNKSKMDKRRDLLKRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRAKKNYMKVW 86 (134)
T ss_dssp TCEEEECCCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCEEESSCCTTCCEEEESSCGGGGGGSCTTSHHHHHHHTTCEEE
T ss_pred cceEEecCCchHHHHHHHHHhhHHHHHHHHHHHHHcCCEEeeecCCceEEEEeCCcCcccccCCcchHHHHHHHcCCeee
Confidence 467888765433221 0124456667899999999999999999999763 333678899999998
Q ss_pred ChhhHHHHHHh
Q 041302 446 DPRWIETANFL 456 (484)
Q Consensus 446 ~~~WL~~c~~~ 456 (484)
+.+=+..=+..
T Consensus 87 s~EKl~RfL~~ 97 (134)
T 3oq4_A 87 SYEKAARFLKN 97 (134)
T ss_dssp EHHHHHHHHHH
T ss_pred eHHHHHHHHHh
Confidence 88877765554
No 123
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.20 E-value=0.062 Score=48.42 Aligned_cols=79 Identities=22% Similarity=0.211 Sum_probs=58.0
Q ss_pred EEEecccHHHHHHHhhh--CCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC-CccccccccCCCCCcEEEE
Q 041302 214 MTKLRPFVHTFLKEASE--MFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ-RHQKGLDVVLGQESAVLIL 290 (484)
Q Consensus 214 ~vklRPgl~eFL~~ls~--~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~-~~~KdL~~l~~~~~~vVII 290 (484)
.+.+.||+.++|+.+.+ .|.+.|.|++.+.++..+++.+.-.. +|.. +++...-.. .+.+-++++.-+.+.++.|
T Consensus 103 ~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~-~f~~-~~~~~kpk~~~~~~~~~~lgi~~~~~i~i 180 (234)
T 3ddh_A 103 PIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSP-YFDH-IEVMSDKTEKEYLRLLSILQIAPSELLMV 180 (234)
T ss_dssp CCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGG-GCSE-EEEESCCSHHHHHHHHHHHTCCGGGEEEE
T ss_pred cCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHh-hhhe-eeecCCCCHHHHHHHHHHhCCCcceEEEE
Confidence 35789999999999987 69999999999999999999877654 6754 554432111 1223344455577889999
Q ss_pred cCCh
Q 041302 291 DDTE 294 (484)
Q Consensus 291 DD~~ 294 (484)
+|+.
T Consensus 181 GD~~ 184 (234)
T 3ddh_A 181 GNSF 184 (234)
T ss_dssp ESCC
T ss_pred CCCc
Confidence 9995
No 124
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=92.98 E-value=0.06 Score=55.53 Aligned_cols=53 Identities=19% Similarity=0.133 Sum_probs=44.5
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccc-eeEEeecC
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFN-ARVISRDD 268 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~-~RI~sRd~ 268 (484)
+.+.||+.++|+.|.+. |.+.|.|++.+.++..+++.++-.. +|. +.|++.++
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~-~Fd~~~Ivs~dd 268 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP-YFEADFIATASD 268 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG-GSCGGGEECHHH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH-hcCCCEEEeccc
Confidence 57899999999999876 9999999999999999999886543 785 26777654
No 125
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=92.85 E-value=0.095 Score=48.01 Aligned_cols=76 Identities=12% Similarity=0.076 Sum_probs=50.2
Q ss_pred EEEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCc
Q 041302 214 MTKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESA 286 (484)
Q Consensus 214 ~vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~ 286 (484)
.+.+.||+.++|+.+.+. |.+.|.|++.+ ++..+++.++-.. +|. .+++.++... + +.+-++++..+.
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~-~f~-~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~-- 167 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKK-YFD-ALALSYEIKAVKPNPKIFGFALAKVGYPA-- 167 (220)
T ss_dssp EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGG-GCS-EEC-----------CCHHHHHHHHHCSSE--
T ss_pred CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHh-Hee-EEEeccccCCCCCCHHHHHHHHHHcCCCe--
Confidence 578999999999999875 99999999977 6888888876554 774 4666665431 1 222233333233
Q ss_pred EEEEcCChh
Q 041302 287 VLILDDTEN 295 (484)
Q Consensus 287 vVIIDD~~~ 295 (484)
++|+|++.
T Consensus 168 -~~vgD~~~ 175 (220)
T 2zg6_A 168 -VHVGDIYE 175 (220)
T ss_dssp -EEEESSCC
T ss_pred -EEEcCCch
Confidence 99999875
No 126
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=92.42 E-value=0.083 Score=47.18 Aligned_cols=81 Identities=12% Similarity=0.188 Sum_probs=58.2
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCC--CC----ccccccccCCCCCcEE
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGT--QR----HQKGLDVVLGQESAVL 288 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~--~~----~~KdL~~l~~~~~~vV 288 (484)
..+.||+.++|+.+.+...++|.|++.+.++..+++.++-.. +|. .+++.++.. ++ +.+-++.+..+.+.++
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~-~f~-~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 162 (200)
T 3cnh_A 85 SQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGE-FLL-AFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAV 162 (200)
T ss_dssp CCBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGG-TCS-CEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred CccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHH-hcc-eEEeecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 348899999999997766999999999999999999876543 674 455554432 11 2223344445678899
Q ss_pred EEcCChhhh
Q 041302 289 ILDDTENAW 297 (484)
Q Consensus 289 IIDD~~~vw 297 (484)
+|+|++.-.
T Consensus 163 ~vgD~~~Di 171 (200)
T 3cnh_A 163 MVDDRLQNV 171 (200)
T ss_dssp EEESCHHHH
T ss_pred EeCCCHHHH
Confidence 999987544
No 127
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=92.38 E-value=0.082 Score=49.20 Aligned_cols=78 Identities=12% Similarity=0.060 Sum_probs=56.9
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCC-CCCccccccccCCCCCcEEEEcCC
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDG-TQRHQKGLDVVLGQESAVLILDDT 293 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c-~~~~~KdL~~l~~~~~~vVIIDD~ 293 (484)
+.+.||+.++|+.+...|.+.|+|++.+.++..+++.+.-.. +|. .+++...- +..+.+-++.+.-+.+.++.|+|+
T Consensus 111 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~-~i~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~ 188 (251)
T 2pke_A 111 VEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSD-LFP-RIEVVSEKDPQTYARVLSEFDLPAERFVMIGNS 188 (251)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGG-TCC-CEEEESCCSHHHHHHHHHHHTCCGGGEEEEESC
T ss_pred CCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHH-hCc-eeeeeCCCCHHHHHHHHHHhCcCchhEEEECCC
Confidence 567899999999998779999999999999999998876643 674 45543211 111223334444567889999998
Q ss_pred h
Q 041302 294 E 294 (484)
Q Consensus 294 ~ 294 (484)
+
T Consensus 189 ~ 189 (251)
T 2pke_A 189 L 189 (251)
T ss_dssp C
T ss_pred c
Confidence 7
No 128
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=92.22 E-value=0.12 Score=48.20 Aligned_cols=80 Identities=11% Similarity=-0.104 Sum_probs=59.6
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCC------ccccccccCCCC-Cc
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQR------HQKGLDVVLGQE-SA 286 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~------~~KdL~~l~~~~-~~ 286 (484)
+.+.||+.++|+.+.+. |.+.|+|++.+.++..+++.+.-.+.+| +.+++.++.... +.+-++++.-+. +.
T Consensus 110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 188 (277)
T 3iru_A 110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP-ASTVFATDVVRGRPFPDMALKVALELEVGHVNG 188 (277)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC-SEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGG
T ss_pred CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC-ceEecHHhcCCCCCCHHHHHHHHHHcCCCCCcc
Confidence 57899999999999876 9999999999999999998876554225 457766665421 122234444566 88
Q ss_pred EEEEcCChh
Q 041302 287 VLILDDTEN 295 (484)
Q Consensus 287 vVIIDD~~~ 295 (484)
+++|+|+..
T Consensus 189 ~i~vGD~~~ 197 (277)
T 3iru_A 189 CIKVDDTLP 197 (277)
T ss_dssp EEEEESSHH
T ss_pred EEEEcCCHH
Confidence 999999874
No 129
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=92.07 E-value=0.15 Score=46.50 Aligned_cols=49 Identities=18% Similarity=0.318 Sum_probs=41.6
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCC-cccceeE
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSR-EYFNARV 263 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~-~~F~~RI 263 (484)
+.++||+.++|+.+.+. +.++|.|++.+.++..+++.+.-.. .+|...+
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~ 135 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRL 135 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECE
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeE
Confidence 67899999999999765 9999999999999999999887653 4776543
No 130
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=91.98 E-value=0.14 Score=46.26 Aligned_cols=80 Identities=14% Similarity=0.025 Sum_probs=59.2
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----cccc---ccccCCCCC
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKG---LDVVLGQES 285 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~Kd---L~~l~~~~~ 285 (484)
+.+.|++.++|+.+.+.|.+.|.|++.+.++..+++.|. .+|. .+++.++... + +.+- ++++.-+.+
T Consensus 98 ~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~l~---~~fd-~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~ 173 (240)
T 3smv_A 98 WPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAKLG---VEFD-HIITAQDVGSYKPNPNNFTYMIDALAKAGIEKK 173 (240)
T ss_dssp CCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTTTC---SCCS-EEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGG
T ss_pred CCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHhcC---CccC-EEEEccccCCCCCCHHHHHHHHHHHHhcCCCch
Confidence 468899999999998889999999999999999988765 3674 4666655432 1 1122 455555788
Q ss_pred cEEEEcCCh--hhhh
Q 041302 286 AVLILDDTE--NAWT 298 (484)
Q Consensus 286 ~vVIIDD~~--~vw~ 298 (484)
.+|.|+|+. ++-.
T Consensus 174 ~~~~vGD~~~~Di~~ 188 (240)
T 3smv_A 174 DILHTAESLYHDHIP 188 (240)
T ss_dssp GEEEEESCTTTTHHH
T ss_pred hEEEECCCchhhhHH
Confidence 899999984 5543
No 131
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=91.84 E-value=0.11 Score=47.72 Aligned_cols=79 Identities=10% Similarity=0.023 Sum_probs=55.2
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccc-eeEEeecCCCC--C----ccccccccCCCCCc
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFN-ARVISRDDGTQ--R----HQKGLDVVLGQESA 286 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~-~RI~sRd~c~~--~----~~KdL~~l~~~~~~ 286 (484)
..+.||+.++|+.+.+. +.+.|.|++.+.++..+++. .-. .+|. +.+++.++... + +.+-++++.-+.+.
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~-~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~ 184 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFP-GIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNE 184 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HST-TTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHH-HhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhh
Confidence 57889999999999876 99999999999999998887 443 3673 34666665432 1 22234444457788
Q ss_pred EEEEcCChh
Q 041302 287 VLILDDTEN 295 (484)
Q Consensus 287 vVIIDD~~~ 295 (484)
+|.|+|+..
T Consensus 185 ~i~vGD~~~ 193 (247)
T 3dv9_A 185 ALVIENAPL 193 (247)
T ss_dssp EEEEECSHH
T ss_pred eEEEeCCHH
Confidence 999999874
No 132
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=91.82 E-value=0.23 Score=47.09 Aligned_cols=79 Identities=14% Similarity=0.167 Sum_probs=58.6
Q ss_pred EEecccHHHHHHHhhh-CC--eEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC------C----ccccccccC
Q 041302 215 TKLRPFVHTFLKEASE-MF--EMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ------R----HQKGLDVVL 281 (484)
Q Consensus 215 vklRPgl~eFL~~ls~-~y--El~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~------~----~~KdL~~l~ 281 (484)
+.+.||+.++|+.+.+ .| .+.|.|++.+.++..+++.+.-.. +|.. +++.+.... + +.+-++++.
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~fd~-v~~~~~~~~~~~~~Kp~~~~~~~~~~~lg 218 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIAD-LFDG-LTYCDYSRTDTLVCKPHVKAFEKAMKESG 218 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTT-SCSE-EECCCCSSCSSCCCTTSHHHHHHHHHHHT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccc-ccce-EEEeccCCCcccCCCcCHHHHHHHHHHcC
Confidence 6789999999999976 58 999999999999999999887765 7754 555544321 1 122234444
Q ss_pred CCC-CcEEEEcCChh
Q 041302 282 GQE-SAVLILDDTEN 295 (484)
Q Consensus 282 ~~~-~~vVIIDD~~~ 295 (484)
-+. +.+|+|+|+..
T Consensus 219 i~~~~~~i~vGD~~~ 233 (282)
T 3nuq_A 219 LARYENAYFIDDSGK 233 (282)
T ss_dssp CCCGGGEEEEESCHH
T ss_pred CCCcccEEEEcCCHH
Confidence 466 89999999874
No 133
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=91.78 E-value=0.11 Score=47.98 Aligned_cols=79 Identities=10% Similarity=0.040 Sum_probs=57.8
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccc-eeEEeecCCCCC------ccccccccCCCCCc
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFN-ARVISRDDGTQR------HQKGLDVVLGQESA 286 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~-~RI~sRd~c~~~------~~KdL~~l~~~~~~ 286 (484)
+.+.||+.++|+.+.+. +.+.|+|++.+.++..+++. .-. .+|. +.+++.++.... +.+-++++.-+.+.
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~-~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~ 185 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFP-GMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADE 185 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HST-TTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGG
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHH-HhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHH
Confidence 57889999999999876 99999999999999888876 443 3672 346666654321 22234444457788
Q ss_pred EEEEcCChh
Q 041302 287 VLILDDTEN 295 (484)
Q Consensus 287 vVIIDD~~~ 295 (484)
+|+|+|++.
T Consensus 186 ~i~vGD~~~ 194 (243)
T 3qxg_A 186 AVVIENAPL 194 (243)
T ss_dssp EEEEECSHH
T ss_pred eEEEeCCHH
Confidence 999999874
No 134
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=91.67 E-value=0.12 Score=48.83 Aligned_cols=81 Identities=12% Similarity=0.049 Sum_probs=58.6
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCcE
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESAV 287 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~v 287 (484)
+.+.||+.++|+.+.+. |.+.|.|++.+. +..+++.+.-.. +|. .+++.+++.. + +.+-++++.-+.+.+
T Consensus 105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~-~f~-~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~ 181 (263)
T 3k1z_A 105 WQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLRE-HFD-FVLTSEAAGWPKPDPRIFQEALRLAHMEPVVA 181 (263)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGG-GCS-CEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGE
T ss_pred ceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHH-hhh-EEEeecccCCCCCCHHHHHHHHHHcCCCHHHE
Confidence 57899999999999876 999999998874 678888776544 674 4666655431 1 233344555577889
Q ss_pred EEEcCCh--hhhh
Q 041302 288 LILDDTE--NAWT 298 (484)
Q Consensus 288 VIIDD~~--~vw~ 298 (484)
|+|+|++ ++-.
T Consensus 182 ~~vGD~~~~Di~~ 194 (263)
T 3k1z_A 182 AHVGDNYLCDYQG 194 (263)
T ss_dssp EEEESCHHHHTHH
T ss_pred EEECCCcHHHHHH
Confidence 9999996 4544
No 135
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=91.62 E-value=0.32 Score=42.60 Aligned_cols=80 Identities=20% Similarity=0.194 Sum_probs=56.6
Q ss_pred EEEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--Cc----cccccccCCCCCc
Q 041302 214 MTKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--RH----QKGLDVVLGQESA 286 (484)
Q Consensus 214 ~vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~~----~KdL~~l~~~~~~ 286 (484)
.+..+|++.++|+.+.+. +.+.|+|++.+.++. +++.+.-.. +|. .+++.++... +. .+=++.+.-+.+.
T Consensus 83 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~-~f~-~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~ 159 (207)
T 2go7_A 83 QVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVES-YFT-EILTSQSGFVRKPSPEAATYLLDKYQLNSDN 159 (207)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGG-GEE-EEECGGGCCCCTTSSHHHHHHHHHHTCCGGG
T ss_pred cceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchh-hee-eEEecCcCCCCCCCcHHHHHHHHHhCCCccc
Confidence 356899999999999875 999999999999999 888876543 674 4555544321 11 1112333446778
Q ss_pred EEEEcCChhh
Q 041302 287 VLILDDTENA 296 (484)
Q Consensus 287 vVIIDD~~~v 296 (484)
++.|+|+..-
T Consensus 160 ~~~iGD~~nD 169 (207)
T 2go7_A 160 TYYIGDRTLD 169 (207)
T ss_dssp EEEEESSHHH
T ss_pred EEEECCCHHH
Confidence 9999998653
No 136
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=91.54 E-value=0.12 Score=47.65 Aligned_cols=77 Identities=8% Similarity=0.035 Sum_probs=57.5
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCcEE
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESAVL 288 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~vV 288 (484)
+.+.|++.++|+.+.+.+.+.|.|++.+.++..+++.+.-. |. .+++.+.... + +.+-++++.-+.+.++
T Consensus 119 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~---f~-~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~ 194 (254)
T 3umc_A 119 LRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP---WD-MLLCADLFGHYKPDPQVYLGACRLLDLPPQEVM 194 (254)
T ss_dssp CEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC---CS-EECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC---cc-eEEeecccccCCCCHHHHHHHHHHcCCChHHEE
Confidence 56789999999999888999999999999999999988653 63 4655554322 1 2223444545778899
Q ss_pred EEcCChh
Q 041302 289 ILDDTEN 295 (484)
Q Consensus 289 IIDD~~~ 295 (484)
.|+|+..
T Consensus 195 ~iGD~~~ 201 (254)
T 3umc_A 195 LCAAHNY 201 (254)
T ss_dssp EEESCHH
T ss_pred EEcCchH
Confidence 9999864
No 137
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=91.33 E-value=0.17 Score=46.01 Aligned_cols=75 Identities=11% Similarity=0.110 Sum_probs=52.4
Q ss_pred ecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC------CccccccccCCCCCcEEE
Q 041302 217 LRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ------RHQKGLDVVLGQESAVLI 289 (484)
Q Consensus 217 lRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~------~~~KdL~~l~~~~~~vVI 289 (484)
+.||+.++|+.+.+. |.+.|+|++.+ +..+++.+.-.+ +|. .+++.++... .+.+-++.+.-+.+.+|+
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~-~f~-~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~ 168 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIID-DFH-AIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAA 168 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTT-TCS-EECCC---------CCHHHHHHHHHTSCGGGEEE
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHh-hcC-EEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEE
Confidence 689999999999876 99999999965 778888776554 674 4665555432 122334445557788999
Q ss_pred EcCChh
Q 041302 290 LDDTEN 295 (484)
Q Consensus 290 IDD~~~ 295 (484)
|+|++.
T Consensus 169 vGDs~~ 174 (233)
T 3nas_A 169 IEDAEA 174 (233)
T ss_dssp EECSHH
T ss_pred EeCCHH
Confidence 999864
No 138
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=91.08 E-value=0.49 Score=42.20 Aligned_cols=80 Identities=15% Similarity=0.099 Sum_probs=57.6
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--Cc----cccccccCCCCCcE
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--RH----QKGLDVVLGQESAV 287 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~~----~KdL~~l~~~~~~v 287 (484)
+.+.|++.++|+.+.+. +.++|+|++.+.++..+++.++-.. +|.. +++.++... +. .+=++.+.-+.+.+
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~~~-~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~ 170 (226)
T 1te2_A 93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRD-SFDA-LASAEKLPYSKPHPQVYLDCAAKLGVDPLTC 170 (226)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSE-EEECTTSSCCTTSTHHHHHHHHHHTSCGGGE
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHh-hCcE-EEeccccCCCCCChHHHHHHHHHcCCCHHHe
Confidence 56789999999999775 9999999999999999999876543 6754 555555432 11 11223334467789
Q ss_pred EEEcCChhh
Q 041302 288 LILDDTENA 296 (484)
Q Consensus 288 VIIDD~~~v 296 (484)
+.|+|+..-
T Consensus 171 i~iGD~~nD 179 (226)
T 1te2_A 171 VALEDSVNG 179 (226)
T ss_dssp EEEESSHHH
T ss_pred EEEeCCHHH
Confidence 999998753
No 139
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=90.79 E-value=0.43 Score=43.54 Aligned_cols=48 Identities=6% Similarity=-0.088 Sum_probs=40.7
Q ss_pred EecccHHHHHHHhhh-CCeEEEecCCcHhHHHHHHhhhCCCCcccceeEE
Q 041302 216 KLRPFVHTFLKEASE-MFEMYIYTMGDRPYALEMAKLLDPSREYFNARVI 264 (484)
Q Consensus 216 klRPgl~eFL~~ls~-~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~ 264 (484)
.++||+.++|+.+.+ .+.++|.|++.+.++..+++.+.-.. +|+..+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~-~~~~~~~ 140 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH-LIATDPE 140 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE-EEECEEE
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-EEEcceE
Confidence 469999999999976 59999999999999999999987653 6665554
No 140
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=90.62 E-value=0.41 Score=42.47 Aligned_cols=80 Identities=18% Similarity=0.302 Sum_probs=55.8
Q ss_pred EecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCC-CcccceeEEeecC-C------CC----CccccccccCC
Q 041302 216 KLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPS-REYFNARVISRDD-G------TQ----RHQKGLDVVLG 282 (484)
Q Consensus 216 klRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~-~~~F~~RI~sRd~-c------~~----~~~KdL~~l~~ 282 (484)
.++||+.++|+.+.+. +.++|.|++.+.++..+++.+.-. ..+|...+....+ . .. ...+-|...++
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKG 161 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGG
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhC
Confidence 3789999999999765 999999999999999999987653 2355444432222 1 11 12333444433
Q ss_pred -CCCcEEEEcCChh
Q 041302 283 -QESAVLILDDTEN 295 (484)
Q Consensus 283 -~~~~vVIIDD~~~ 295 (484)
+.+.++.|.|+..
T Consensus 162 ~~~~~~~~vGD~~~ 175 (219)
T 3kd3_A 162 LIDGEVIAIGDGYT 175 (219)
T ss_dssp GCCSEEEEEESSHH
T ss_pred CCCCCEEEEECCHh
Confidence 6778999999865
No 141
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=90.57 E-value=0.22 Score=44.90 Aligned_cols=76 Identities=12% Similarity=0.055 Sum_probs=55.8
Q ss_pred ecccHHHHHHHhhhC-CeEEEecCCc---HhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCc
Q 041302 217 LRPFVHTFLKEASEM-FEMYIYTMGD---RPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESA 286 (484)
Q Consensus 217 lRPgl~eFL~~ls~~-yEl~IyT~g~---r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~ 286 (484)
..|++.++|+.+.+. +.+.|+|++. +.++..+++.++-.. +|. .+++.++... + +.+-++++.-+.+.
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~-~f~-~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 177 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLME-FID-KTFFADEVLSYKPRKEMFEKVLNSFEVKPEE 177 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGG-GCS-EEEEHHHHTCCTTCHHHHHHHHHHTTCCGGG
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHH-Hhh-hheeccccCCCCCCHHHHHHHHHHcCCCccc
Confidence 589999999999876 9999999999 999999998886554 675 4555544321 1 12223444456788
Q ss_pred EEEEcCCh
Q 041302 287 VLILDDTE 294 (484)
Q Consensus 287 vVIIDD~~ 294 (484)
++.|+|++
T Consensus 178 ~~~iGD~~ 185 (235)
T 2om6_A 178 SLHIGDTY 185 (235)
T ss_dssp EEEEESCT
T ss_pred eEEECCCh
Confidence 99999987
No 142
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=90.36 E-value=0.17 Score=46.75 Aligned_cols=78 Identities=12% Similarity=0.002 Sum_probs=54.2
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCCccccccccCCCCCcEEEEcCCh
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQRHQKGLDVVLGQESAVLILDDTE 294 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~~~KdL~~l~~~~~~vVIIDD~~ 294 (484)
+.+.||+.++|+.+.+...+.|.|++.+.++..+++.++-.. +|...+... .....+.+.+.. .-+.+.+++|+|++
T Consensus 95 ~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~-~f~~~~~~~-~~K~~~~~~~~~-~~~~~~~~~vgDs~ 171 (231)
T 2p11_A 95 SRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWD-EVEGRVLIY-IHKELMLDQVME-CYPARHYVMVDDKL 171 (231)
T ss_dssp GGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHH-HTTTCEEEE-SSGGGCHHHHHH-HSCCSEEEEECSCH
T ss_pred CCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHH-hcCeeEEec-CChHHHHHHHHh-cCCCceEEEEcCcc
Confidence 568999999999998777899999999999999999876543 665433211 100112222222 23567899999998
Q ss_pred h
Q 041302 295 N 295 (484)
Q Consensus 295 ~ 295 (484)
.
T Consensus 172 ~ 172 (231)
T 2p11_A 172 R 172 (231)
T ss_dssp H
T ss_pred c
Confidence 5
No 143
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=90.09 E-value=0.12 Score=47.35 Aligned_cols=77 Identities=14% Similarity=0.102 Sum_probs=56.1
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCcEE
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESAVL 288 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~vV 288 (484)
+...|++.++|+.+.+.|.+.|.|++.+.++..+++.+.-. |. .+++.+.... + +.+-++++.-+.+.++
T Consensus 115 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~---f~-~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~ 190 (254)
T 3umg_A 115 LTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP---WD-VIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVM 190 (254)
T ss_dssp CCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC---CS-CCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred CcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC---ee-EEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 56789999999999877999999999999999999987553 53 3554444321 1 1222334444778899
Q ss_pred EEcCChh
Q 041302 289 ILDDTEN 295 (484)
Q Consensus 289 IIDD~~~ 295 (484)
.|+|+..
T Consensus 191 ~iGD~~~ 197 (254)
T 3umg_A 191 LAAAHNG 197 (254)
T ss_dssp EEESCHH
T ss_pred EEeCChH
Confidence 9999864
No 144
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=89.73 E-value=0.43 Score=42.53 Aligned_cols=79 Identities=20% Similarity=0.182 Sum_probs=56.6
Q ss_pred EEecccHHHHHHHhhh-CCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCcE
Q 041302 215 TKLRPFVHTFLKEASE-MFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESAV 287 (484)
Q Consensus 215 vklRPgl~eFL~~ls~-~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~v 287 (484)
+.+.|++.++|+.+.+ .+.+.|.|++.+.++..+++.++-.. +|. .+++.++... + +.+-++.+.-+.+.+
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 165 (225)
T 3d6j_A 88 TILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDD-WFD-IIIGGEDVTHHKPDPEGLLLAIDRLKACPEEV 165 (225)
T ss_dssp CEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTT-CCS-EEECGGGCSSCTTSTHHHHHHHHHTTCCGGGE
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchh-hee-eeeehhhcCCCCCChHHHHHHHHHhCCChHHe
Confidence 5678999999999975 59999999999999999998876543 564 4555554321 1 111223334467889
Q ss_pred EEEcCChh
Q 041302 288 LILDDTEN 295 (484)
Q Consensus 288 VIIDD~~~ 295 (484)
+.|+|++.
T Consensus 166 i~iGD~~n 173 (225)
T 3d6j_A 166 LYIGDSTV 173 (225)
T ss_dssp EEEESSHH
T ss_pred EEEcCCHH
Confidence 99999875
No 145
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=89.24 E-value=0.084 Score=51.28 Aligned_cols=111 Identities=14% Similarity=0.067 Sum_probs=66.8
Q ss_pred ccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhh-CCeEEEecCCc
Q 041302 163 KLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASE-MFEMYIYTMGD 241 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~-~yEl~IyT~g~ 241 (484)
...+++|+|+||...... .+ ..|. ......+.||+.++|+.|.+ -+.|.|-|+..
T Consensus 159 ~~~i~iD~dgtl~~~~~~--~~-~~~~---------------------~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~ 214 (301)
T 1ltq_A 159 PKAVIFDVDGTLAKMNGR--GP-YDLE---------------------KCDTDVINPMVVELSKMYALMGYQIVVVSGRE 214 (301)
T ss_dssp CEEEEEETBTTTBCCSSC--CT-TCGG---------------------GGGGCCBCHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred cceEEEeCCCCcccccCC--Cc-hhhh---------------------hccccCCChHHHHHHHHHHHCCCeEEEEeCCC
Confidence 357889999998765431 11 1110 01125678999999999976 49999999999
Q ss_pred HhHHHHHHhhhCC--------CCcccceeEEeecCCCCC-----ccccccccCCCC-CcEEEEcCChhhhh
Q 041302 242 RPYALEMAKLLDP--------SREYFNARVISRDDGTQR-----HQKGLDVVLGQE-SAVLILDDTENAWT 298 (484)
Q Consensus 242 r~YA~~I~~~LDP--------~~~~F~~RI~sRd~c~~~-----~~KdL~~l~~~~-~~vVIIDD~~~vw~ 298 (484)
+.++..+.+.|.- .|..|. -++++++...+ +.+-+..+.... ..+++|+|+..-..
T Consensus 215 ~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~ 284 (301)
T 1ltq_A 215 SGTKEDPTKYYRMTRKWVEDIAGVPLV-MQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVE 284 (301)
T ss_dssp CCCSSSTTHHHHHHHHHHHHTTCCCCS-EEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHH
T ss_pred cccchhHHHHHHhcccccccccCCCch-heeeccCCCCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHH
Confidence 8887544333333 343464 46666654221 111223333332 34688999976543
No 146
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=88.62 E-value=0.68 Score=40.49 Aligned_cols=76 Identities=16% Similarity=0.158 Sum_probs=52.1
Q ss_pred ecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--Cc----cccccccCCCCCcEEE
Q 041302 217 LRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--RH----QKGLDVVLGQESAVLI 289 (484)
Q Consensus 217 lRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~~----~KdL~~l~~~~~~vVI 289 (484)
..|++.++|+.+.+. +.++|+|++. .++..+++.+.-.. +|. .+++.+++.. +. .+-++.+.-+ .++.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~-~f~-~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~ 157 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAA-YFT-EVVTSSSGFKRKPNPESMLYLREKYQIS--SGLV 157 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGG-GEE-EEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEE
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHh-hee-eeeeccccCCCCCCHHHHHHHHHHcCCC--eEEE
Confidence 889999999999875 9999999886 57888888776543 674 4666655432 11 1112222223 8999
Q ss_pred EcCChhhh
Q 041302 290 LDDTENAW 297 (484)
Q Consensus 290 IDD~~~vw 297 (484)
|+|++.-.
T Consensus 158 iGD~~~Di 165 (190)
T 2fi1_A 158 IGDRPIDI 165 (190)
T ss_dssp EESSHHHH
T ss_pred EcCCHHHH
Confidence 99987533
No 147
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=88.34 E-value=0.55 Score=44.61 Aligned_cols=80 Identities=18% Similarity=0.115 Sum_probs=58.6
Q ss_pred EEecccHHHHHHHhhhC--CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCC------ccccccccCC----
Q 041302 215 TKLRPFVHTFLKEASEM--FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQR------HQKGLDVVLG---- 282 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~--yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~------~~KdL~~l~~---- 282 (484)
+.+.||+.++|+.+.+. +.+.|.|++.+.++..+++.++-. .|. .+++.++.... +.+-++++.-
T Consensus 113 ~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~--~f~-~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 189 (275)
T 2qlt_A 113 SIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK--RPE-YFITANDVKQGKPHPEPYLKGRNGLGFPINE 189 (275)
T ss_dssp CEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC--CCS-SEECGGGCSSCTTSSHHHHHHHHHTTCCCCS
T ss_pred CCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC--ccC-EEEEcccCCCCCCChHHHHHHHHHcCCCccc
Confidence 56889999999999875 899999999999999999987654 353 46666654321 1222344444
Q ss_pred ---CCCcEEEEcCChhhh
Q 041302 283 ---QESAVLILDDTENAW 297 (484)
Q Consensus 283 ---~~~~vVIIDD~~~vw 297 (484)
+.+.++.|+|++.=.
T Consensus 190 ~~~~~~~~i~~GDs~nDi 207 (275)
T 2qlt_A 190 QDPSKSKVVVFEDAPAGI 207 (275)
T ss_dssp SCGGGSCEEEEESSHHHH
T ss_pred cCCCcceEEEEeCCHHHH
Confidence 678899999987533
No 148
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=88.07 E-value=0.24 Score=45.83 Aligned_cols=81 Identities=10% Similarity=0.056 Sum_probs=54.3
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhh-hCCCCcccceeEEeec--CCCC--C----ccccccccCCCC
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKL-LDPSREYFNARVISRD--DGTQ--R----HQKGLDVVLGQE 284 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~-LDP~~~~F~~RI~sRd--~c~~--~----~~KdL~~l~~~~ 284 (484)
+.+.||+.++|+.+.+. +.+.|+|++.+.++...+.. +.-. .+|. .+++.+ +... + +.+-++++.-+.
T Consensus 111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~-~~f~-~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~ 188 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFF-SLFS-HIVLGDDPEVQHGKPDPDIFLACAKRFSPPP 188 (250)
T ss_dssp CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHH-TTSS-CEECTTCTTCCSCTTSTHHHHHHHHTSSSCC
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHH-hhee-eEEecchhhccCCCCChHHHHHHHHHcCCCC
Confidence 56899999999999876 99999999998887766532 2222 2564 466555 3321 1 122334444344
Q ss_pred --CcEEEEcCChhhh
Q 041302 285 --SAVLILDDTENAW 297 (484)
Q Consensus 285 --~~vVIIDD~~~vw 297 (484)
+.+|+|+|+..-.
T Consensus 189 ~~~~~i~iGD~~~Di 203 (250)
T 3l5k_A 189 AMEKCLVFEDAPNGV 203 (250)
T ss_dssp CGGGEEEEESSHHHH
T ss_pred CcceEEEEeCCHHHH
Confidence 8899999987533
No 149
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=87.94 E-value=0.96 Score=40.03 Aligned_cols=79 Identities=15% Similarity=0.226 Sum_probs=49.3
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCc---HhHH--HHHHhh-hCCCCcccceeEEeecCCCCCccccccccCCCCCcEE
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGD---RPYA--LEMAKL-LDPSREYFNARVISRDDGTQRHQKGLDVVLGQESAVL 288 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~---r~YA--~~I~~~-LDP~~~~F~~RI~sRd~c~~~~~KdL~~l~~~~~~vV 288 (484)
+.+.||+.++|+.|.+.|.+.|-|+++ +... ...+.. ++. -.+| +.|++.++. ++ ..+|
T Consensus 68 ~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~-~~~~-~~i~~~~~~---------~l----~~~l 132 (180)
T 3bwv_A 68 LDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPF-LDPQ-HFVFCGRKN---------II----LADY 132 (180)
T ss_dssp CCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTT-SCGG-GEEECSCGG---------GB----CCSE
T ss_pred CCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCC-CCcc-cEEEeCCcC---------ee----cccE
Confidence 678899999999998889999999983 2222 222332 322 1234 467765441 12 5579
Q ss_pred EEcCChhhhhcCCCCeEEec
Q 041302 289 ILDDTENAWTKHRDNLILME 308 (484)
Q Consensus 289 IIDD~~~vw~~~~~NlI~I~ 308 (484)
+|||++.--......+|.+.
T Consensus 133 ~ieDs~~~i~~aaG~~i~~~ 152 (180)
T 3bwv_A 133 LIDDNPKQLEIFEGKSIMFT 152 (180)
T ss_dssp EEESCHHHHHHCSSEEEEEC
T ss_pred EecCCcchHHHhCCCeEEeC
Confidence 99999875543333445443
No 150
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=87.94 E-value=0.3 Score=43.99 Aligned_cols=80 Identities=15% Similarity=0.096 Sum_probs=57.0
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCC--------ccccccccCCCCCc
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQR--------HQKGLDVVLGQESA 286 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~--------~~KdL~~l~~~~~~ 286 (484)
+.+.|++.++|+.+.. .++|.|++.+.++..+++.+.-.. +|.+.+++.++.... +.+=++.+.-+.+.
T Consensus 86 ~~~~~~~~~~l~~l~~--~~~i~s~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~ 162 (229)
T 2fdr_A 86 VKIIDGVKFALSRLTT--PRCICSNSSSHRLDMMLTKVGLKP-YFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDR 162 (229)
T ss_dssp CCBCTTHHHHHHHCCS--CEEEEESSCHHHHHHHHHHTTCGG-GTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGG
T ss_pred CccCcCHHHHHHHhCC--CEEEEECCChhHHHHHHHhCChHH-hccceEEeccccccCCCCcCHHHHHHHHHHcCCChhH
Confidence 5678999999999876 899999999999999999886543 673446665543211 11223334446788
Q ss_pred EEEEcCChhhh
Q 041302 287 VLILDDTENAW 297 (484)
Q Consensus 287 vVIIDD~~~vw 297 (484)
++.|+|+..-.
T Consensus 163 ~i~iGD~~~Di 173 (229)
T 2fdr_A 163 VVVVEDSVHGI 173 (229)
T ss_dssp EEEEESSHHHH
T ss_pred eEEEcCCHHHH
Confidence 99999987533
No 151
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=87.18 E-value=0.51 Score=44.12 Aligned_cols=78 Identities=9% Similarity=0.082 Sum_probs=57.5
Q ss_pred EecccHHHHHHHhh-hCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC------CccccccccCCCCCcEE
Q 041302 216 KLRPFVHTFLKEAS-EMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ------RHQKGLDVVLGQESAVL 288 (484)
Q Consensus 216 klRPgl~eFL~~ls-~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~------~~~KdL~~l~~~~~~vV 288 (484)
.+.||+.++|+.+. ..+-+.|.|++. .+..+++.+.-.. +|. .|++.++... .+.+-++++.-..+.+|
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~-~fd-~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l 170 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELRE-FFT-FCADASQLKNSKPDPEIFLAACAGLGVPPQACI 170 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGG-GCS-EECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred cccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhcc-ccc-cccccccccCCCCcHHHHHHHHHHcCCChHHEE
Confidence 47899999999995 468888888765 4677888887654 774 5776666532 24566677777888999
Q ss_pred EEcCChhhh
Q 041302 289 ILDDTENAW 297 (484)
Q Consensus 289 IIDD~~~vw 297 (484)
+|+|++.-.
T Consensus 171 ~VgDs~~di 179 (243)
T 4g9b_A 171 GIEDAQAGI 179 (243)
T ss_dssp EEESSHHHH
T ss_pred EEcCCHHHH
Confidence 999986533
No 152
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=87.07 E-value=0.51 Score=40.25 Aligned_cols=62 Identities=27% Similarity=0.198 Sum_probs=41.1
Q ss_pred EEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhh-hCCeEEEecCCcHh
Q 041302 165 YLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEAS-EMFEMYIYTMGDRP 243 (484)
Q Consensus 165 ~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls-~~yEl~IyT~g~r~ 243 (484)
.+++||||||++..... . .+ +.+.|+..+.|+.+. +-+.+.|.|.....
T Consensus 3 ~i~~DlDGTL~~~~~~~-~--------------~~---------------~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 3 KLIVDLDGTLTQANTSD-Y--------------RN---------------VLPRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp EEEECSTTTTBCCCCSC-G--------------GG---------------CCBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred EEEEecCCCCCCCCCCc-c--------------cc---------------CCCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 68899999999864310 0 00 234578888998885 45889999866543
Q ss_pred H------------HHHHHhhhCCCC
Q 041302 244 Y------------ALEMAKLLDPSR 256 (484)
Q Consensus 244 Y------------A~~I~~~LDP~~ 256 (484)
. +..|++.+...+
T Consensus 53 ~~nG~~~~~~~~~~~~i~~~~~~~~ 77 (126)
T 1xpj_A 53 TYEGNVGKINIHTLPIITEWLDKHQ 77 (126)
T ss_dssp TTTTCHHHHHHHTHHHHHHHHHHTT
T ss_pred hccccccccCHHHHHHHHHHHHHcC
Confidence 2 456666665554
No 153
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=87.01 E-value=0.38 Score=49.07 Aligned_cols=77 Identities=19% Similarity=0.087 Sum_probs=55.1
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCC------cHhHHHHHHhhhCCCCcccceeEEeecCCCC------CccccccccC
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMG------DRPYALEMAKLLDPSREYFNARVISRDDGTQ------RHQKGLDVVL 281 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g------~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~------~~~KdL~~l~ 281 (484)
+.+.||+.++|+.|.+. |.+.|.|++ .+......+.-|+. +|. .|++.++... .+.+-++++.
T Consensus 99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~---~fd-~i~~~~~~~~~KP~p~~~~~~~~~lg 174 (555)
T 3i28_A 99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKM---HFD-FLIESCQVGMVKPEPQIYKFLLDTLK 174 (555)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHT---TSS-EEEEHHHHTCCTTCHHHHHHHHHHHT
T ss_pred cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhh---hee-EEEeccccCCCCCCHHHHHHHHHHcC
Confidence 57889999999999876 999999999 55555555444443 675 4666655432 2445566666
Q ss_pred CCCCcEEEEcCChh
Q 041302 282 GQESAVLILDDTEN 295 (484)
Q Consensus 282 ~~~~~vVIIDD~~~ 295 (484)
-+.+.+++|+|+..
T Consensus 175 ~~p~~~~~v~D~~~ 188 (555)
T 3i28_A 175 ASPSEVVFLDDIGA 188 (555)
T ss_dssp CCGGGEEEEESCHH
T ss_pred CChhHEEEECCcHH
Confidence 67788999999865
No 154
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=86.53 E-value=0.65 Score=43.44 Aligned_cols=57 Identities=11% Similarity=0.104 Sum_probs=44.4
Q ss_pred cEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhh-CCeEEEecCCcH
Q 041302 164 LYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASE-MFEMYIYTMGDR 242 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~-~yEl~IyT~g~r 242 (484)
..+++|||+||++... .+.|...+.|+++.+ .+.++|-|.-+.
T Consensus 6 kli~~DlDGTLl~~~~------------------------------------~i~~~~~~~l~~l~~~g~~~~i~TGr~~ 49 (227)
T 1l6r_A 6 RLAAIDVDGNLTDRDR------------------------------------LISTKAIESIRSAEKKGLTVSLLSGNVI 49 (227)
T ss_dssp CEEEEEHHHHSBCTTS------------------------------------CBCHHHHHHHHHHHHTTCEEEEECSSCH
T ss_pred EEEEEECCCCCcCCCC------------------------------------cCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 4789999999997532 134667788988865 588999999988
Q ss_pred hHHHHHHhhhCCCC
Q 041302 243 PYALEMAKLLDPSR 256 (484)
Q Consensus 243 ~YA~~I~~~LDP~~ 256 (484)
..+..+++.+...+
T Consensus 50 ~~~~~~~~~l~~~~ 63 (227)
T 1l6r_A 50 PVVYALKIFLGING 63 (227)
T ss_dssp HHHHHHHHHHTCCS
T ss_pred HHHHHHHHHhCCCC
Confidence 88888888776554
No 155
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=86.38 E-value=0.45 Score=44.32 Aligned_cols=80 Identities=15% Similarity=-0.027 Sum_probs=55.7
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCC-Cc
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQE-SA 286 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~-~~ 286 (484)
....||+.++|+.+.+. +.+.|.|++.+.++..+++.+...+ +|.+.+++.+++.. + +.+-++.+.-+. +.
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 180 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQG-YKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNH 180 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTT-CCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGG
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcc-cChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcC
Confidence 46789999999999765 9999999999999999998875444 43234555554432 1 111233344455 78
Q ss_pred EEEEcCChh
Q 041302 287 VLILDDTEN 295 (484)
Q Consensus 287 vVIIDD~~~ 295 (484)
++.|.|+..
T Consensus 181 ~i~iGD~~n 189 (267)
T 1swv_A 181 MIKVGDTVS 189 (267)
T ss_dssp EEEEESSHH
T ss_pred EEEEeCCHH
Confidence 999999864
No 156
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=86.14 E-value=1.1 Score=45.29 Aligned_cols=55 Identities=20% Similarity=0.202 Sum_probs=43.3
Q ss_pred CccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhh-CCeEEEecCC
Q 041302 162 RKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASE-MFEMYIYTMG 240 (484)
Q Consensus 162 rKL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~-~yEl~IyT~g 240 (484)
++..+++||||||++... .=||+.++|+.|.+ -+.+.+.||+
T Consensus 12 ~~~~~l~D~DGvl~~g~~-------------------------------------~~p~a~~~l~~l~~~g~~~~~vTNn 54 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFRGKK-------------------------------------PIAGASDALKLLNRNKIPYILLTNG 54 (352)
T ss_dssp CCEEEEECCBTTTEETTE-------------------------------------ECTTHHHHHHHHHHTTCCEEEECSC
T ss_pred cCCEEEEECCCeeEcCCe-------------------------------------eCcCHHHHHHHHHHCCCEEEEEeCC
Confidence 678899999999987532 11889999999965 5889999998
Q ss_pred c----HhHHHHHHhhhC
Q 041302 241 D----RPYALEMAKLLD 253 (484)
Q Consensus 241 ~----r~YA~~I~~~LD 253 (484)
+ +.||..+.+.+.
T Consensus 55 ~~~~~~~~~~~l~~~lg 71 (352)
T 3kc2_A 55 GGFSERARTEFISSKLD 71 (352)
T ss_dssp CSSCHHHHHHHHHHHHT
T ss_pred CCCCchHHHHHHHHhcC
Confidence 6 788888875443
No 157
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=85.82 E-value=0.47 Score=44.46 Aligned_cols=79 Identities=9% Similarity=0.096 Sum_probs=55.6
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC------CccccccccCCCCCcE
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ------RHQKGLDVVLGQESAV 287 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~------~~~KdL~~l~~~~~~v 287 (484)
..+.||+.++|+.+.+. +-+.+ ++.+..+..+++.+.-.. +|. .|++.++... .+.+-++++.-..+.+
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i--~~~~~~~~~~L~~~gl~~-~Fd-~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~ 190 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGL--SSASKNAINVLNHLGISD-KFD-FIADAGKCKNNKPHPEIFLMSAKGLNVNPQNC 190 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEE--CCSCTTHHHHHHHHTCGG-GCS-EECCGGGCCSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred cccchhHHHHHHHHHhccccccc--ccccchhhhHhhhccccc-ccc-eeecccccCCCCCcHHHHHHHHHHhCCChHHe
Confidence 34689999999999755 45555 444456788888887654 785 5777776542 2445566666678899
Q ss_pred EEEcCChhhh
Q 041302 288 LILDDTENAW 297 (484)
Q Consensus 288 VIIDD~~~vw 297 (484)
|+|+|++.-.
T Consensus 191 l~VGDs~~Di 200 (250)
T 4gib_A 191 IGIEDASAGI 200 (250)
T ss_dssp EEEESSHHHH
T ss_pred EEECCCHHHH
Confidence 9999987543
No 158
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=85.81 E-value=0.22 Score=47.85 Aligned_cols=79 Identities=16% Similarity=0.205 Sum_probs=54.6
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCC----------CCcccceeEEeecC-CCC----Cccccccc
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDP----------SREYFNARVISRDD-GTQ----RHQKGLDV 279 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP----------~~~~F~~RI~sRd~-c~~----~~~KdL~~ 279 (484)
+.+.||+.++|+. .|.+.|.|++.+..+..+++.+.. -..+|. .+|+..- ..+ .+.+-+++
T Consensus 124 ~~~~pgv~e~L~~---g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~-~~f~~~~~g~KP~p~~~~~a~~~ 199 (253)
T 2g80_A 124 APVYADAIDFIKR---KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYID-GYFDINTSGKKTETQSYANILRD 199 (253)
T ss_dssp BCCCHHHHHHHHH---CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCC-EEECHHHHCCTTCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHc---CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcc-eEEeeeccCCCCCHHHHHHHHHH
Confidence 5778999999999 799999999999999999886521 112353 2332211 112 24455566
Q ss_pred cCCCCCcEEEEcCChhhh
Q 041302 280 VLGQESAVLILDDTENAW 297 (484)
Q Consensus 280 l~~~~~~vVIIDD~~~vw 297 (484)
+.-..+.+|+|+|++.-.
T Consensus 200 lg~~p~~~l~vgDs~~di 217 (253)
T 2g80_A 200 IGAKASEVLFLSDNPLEL 217 (253)
T ss_dssp HTCCGGGEEEEESCHHHH
T ss_pred cCCCcccEEEEcCCHHHH
Confidence 666778899999987543
No 159
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=84.95 E-value=0.19 Score=48.34 Aligned_cols=75 Identities=16% Similarity=0.287 Sum_probs=55.4
Q ss_pred EEEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCCCccccccccCCCCCcEEEEcC
Q 041302 214 MTKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQRHQKGLDVVLGQESAVLILDD 292 (484)
Q Consensus 214 ~vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~~~~KdL~~l~~~~~~vVIIDD 292 (484)
...+|||+.++|+.|.+. +.++|.|++.+..+..+++.+.-.. +|.. ++ +....+-++.+......+++|.|
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~f~~-~~-----p~~k~~~~~~l~~~~~~~~~VGD 206 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-YYSN-LS-----PEDKVRIIEKLKQNGNKVLMIGD 206 (263)
Confidence 457999999999999865 9999999999999999999887654 6643 43 11223334444445568999999
Q ss_pred Chh
Q 041302 293 TEN 295 (484)
Q Consensus 293 ~~~ 295 (484)
...
T Consensus 207 ~~~ 209 (263)
T 2yj3_A 207 GVN 209 (263)
Confidence 753
No 160
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=84.47 E-value=0.35 Score=43.69 Aligned_cols=77 Identities=18% Similarity=0.215 Sum_probs=52.8
Q ss_pred EEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCcEE
Q 041302 215 TKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESAVL 288 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~vV 288 (484)
+.+.||+.++|+.+.+.|.+.|.|++... ++.+.-. .+|. .+++.+++.. + +.+-++++.-+.+.++
T Consensus 104 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~-~~f~-~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 176 (230)
T 3vay_A 104 VQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLA-DYFA-FALCAEDLGIGKPDPAPFLEALRRAKVDASAAV 176 (230)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTG-GGCS-EEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred CccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcH-HHee-eeEEccccCCCCcCHHHHHHHHHHhCCCchheE
Confidence 56899999999999888999999999876 3333332 3674 4666654432 1 2233444555778899
Q ss_pred EEcCCh--hhhh
Q 041302 289 ILDDTE--NAWT 298 (484)
Q Consensus 289 IIDD~~--~vw~ 298 (484)
+|+|+. ++-.
T Consensus 177 ~vGD~~~~Di~~ 188 (230)
T 3vay_A 177 HVGDHPSDDIAG 188 (230)
T ss_dssp EEESCTTTTHHH
T ss_pred EEeCChHHHHHH
Confidence 999985 5543
No 161
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=84.39 E-value=1.6 Score=40.45 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=40.9
Q ss_pred cEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhh-hCCeEEEecCCcH
Q 041302 164 LYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEAS-EMFEMYIYTMGDR 242 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls-~~yEl~IyT~g~r 242 (484)
..+++||||||+++.. . +.|...+.|+++. +-..++|.|.-+.
T Consensus 4 kli~~DlDGTLl~~~~--~----------------------------------i~~~~~~al~~l~~~G~~v~i~TGR~~ 47 (231)
T 1wr8_A 4 KAISIDIDGTITYPNR--M----------------------------------IHEKALEAIRRAESLGIPIMLVTGNTV 47 (231)
T ss_dssp CEEEEESTTTTBCTTS--C----------------------------------BCHHHHHHHHHHHHTTCCEEEECSSCH
T ss_pred eEEEEECCCCCCCCCC--c----------------------------------CCHHHHHHHHHHHHCCCEEEEEcCCCh
Confidence 4689999999998642 1 2344567777774 4577888888888
Q ss_pred hHHHHHHhhhCCCC
Q 041302 243 PYALEMAKLLDPSR 256 (484)
Q Consensus 243 ~YA~~I~~~LDP~~ 256 (484)
..+..+++.+....
T Consensus 48 ~~~~~~~~~l~~~~ 61 (231)
T 1wr8_A 48 QFAEAASILIGTSG 61 (231)
T ss_dssp HHHHHHHHHHTCCS
T ss_pred hHHHHHHHHcCCCC
Confidence 88888888776543
No 162
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=83.53 E-value=1.1 Score=39.89 Aligned_cols=77 Identities=12% Similarity=0.161 Sum_probs=53.1
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCCCC--C----ccccccccCCCCCcE
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDGTQ--R----HQKGLDVVLGQESAV 287 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c~~--~----~~KdL~~l~~~~~~v 287 (484)
+.+.|++.++|+.+.+. +.+.|+|++ ..+..+++.++-.. +|. .+++.++... + +.+-++++.-+.+.+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~-~f~-~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 165 (221)
T 2wf7_A 90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTG-YFD-AIADPAEVAASKPAPDIFIAAAHAVGVAPSES 165 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGG-GCS-EECCTTTSSSCTTSSHHHHHHHHHTTCCGGGE
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHH-Hcc-eEeccccCCCCCCChHHHHHHHHHcCCChhHe
Confidence 45789999999999765 999999998 56777887776543 674 4555554431 1 112233444467889
Q ss_pred EEEcCChh
Q 041302 288 LILDDTEN 295 (484)
Q Consensus 288 VIIDD~~~ 295 (484)
+.|+|++.
T Consensus 166 i~iGD~~n 173 (221)
T 2wf7_A 166 IGLEDSQA 173 (221)
T ss_dssp EEEESSHH
T ss_pred EEEeCCHH
Confidence 99999875
No 163
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=82.37 E-value=0.11 Score=47.27 Aligned_cols=45 Identities=16% Similarity=0.102 Sum_probs=36.3
Q ss_pred EEecccHHHHHHHhhh--CCeEEEecCCcHhHHHHHHhhhCCCCccc
Q 041302 215 TKLRPFVHTFLKEASE--MFEMYIYTMGDRPYALEMAKLLDPSREYF 259 (484)
Q Consensus 215 vklRPgl~eFL~~ls~--~yEl~IyT~g~r~YA~~I~~~LDP~~~~F 259 (484)
+.+.||+.++|+.|.+ .|.+.|.|++.+.++..+++.+.-...+|
T Consensus 74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f 120 (197)
T 1q92_A 74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYF 120 (197)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhc
Confidence 5788999999999987 59999999999998888777654332345
No 164
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=81.02 E-value=2.2 Score=40.80 Aligned_cols=57 Identities=23% Similarity=0.181 Sum_probs=39.1
Q ss_pred ccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhh-CCeEEEecCCc
Q 041302 163 KLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASE-MFEMYIYTMGD 241 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~-~yEl~IyT~g~ 241 (484)
...+++||||||++... .+ -|...+.|+++.+ -..++|-|.-+
T Consensus 9 ~~li~~DlDGTLl~~~~--~~----------------------------------~~~~~~~l~~l~~~G~~~~iaTGR~ 52 (275)
T 1xvi_A 9 PLLVFSDLDGTLLDSHS--YD----------------------------------WQPAAPWLTRLREANVPVILCSSKT 52 (275)
T ss_dssp CEEEEEECTTTTSCSSC--CS----------------------------------CCTTHHHHHHHHHTTCCEEEECSSC
T ss_pred ceEEEEeCCCCCCCCCC--cC----------------------------------CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 46899999999997532 11 1233577777754 47788888777
Q ss_pred HhHHHHHHhhhCCC
Q 041302 242 RPYALEMAKLLDPS 255 (484)
Q Consensus 242 r~YA~~I~~~LDP~ 255 (484)
...+..+++.|...
T Consensus 53 ~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 53 SAEMLYLQKTLGLQ 66 (275)
T ss_dssp HHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHcCCC
Confidence 77777777766544
No 165
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=80.99 E-value=0.69 Score=40.55 Aligned_cols=76 Identities=14% Similarity=0.135 Sum_probs=53.0
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEeecCC-------CCCccccccccCCCCCc
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISRDDG-------TQRHQKGLDVVLGQESA 286 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sRd~c-------~~~~~KdL~~l~~~~~~ 286 (484)
+.++||+.++|+.+.+. +.++|.|++.+.++..+ +.+.-.. +| +.+.+.+.. ......-+..+ +.+.
T Consensus 78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~ 152 (201)
T 4ap9_A 78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEF-MA-NRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGF 152 (201)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEE-EE-EEEEEETTEEEEEECCSSCHHHHHGGG--TTSC
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchh-he-eeEEeeCCceECCcCCccCHHHHHHhc--CcCc
Confidence 47899999999999876 99999999999999988 8776544 33 334333321 01112234444 6677
Q ss_pred EEEEcCChh
Q 041302 287 VLILDDTEN 295 (484)
Q Consensus 287 vVIIDD~~~ 295 (484)
++.|+|+..
T Consensus 153 ~i~iGD~~~ 161 (201)
T 4ap9_A 153 ILAMGDGYA 161 (201)
T ss_dssp EEEEECTTC
T ss_pred EEEEeCCHH
Confidence 899999764
No 166
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=80.78 E-value=1.7 Score=40.86 Aligned_cols=47 Identities=9% Similarity=-0.144 Sum_probs=28.2
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCC-ChHHHHHHhcCCeeeChhhH
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDAR-TEKSRWAAKEAKFLVDPRWI 450 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~-T~K~~~A~~~gi~IV~~~WL 450 (484)
.|....+..+++.+|.. +.- +++...+ ..-+..|...|++.|...|-
T Consensus 182 Kp~~~~~~~~~~~~~~~------~~~--~~~vGD~~~~Di~~a~~aG~~~~~v~~g 229 (264)
T 3epr_A 182 KPNAIIMNKALEILNIP------RNQ--AVMVGDNYLTDIMAGINNDIDTLLVTTG 229 (264)
T ss_dssp TTSHHHHHHHHHHHTSC------GGG--EEEEESCTTTHHHHHHHHTCEEEEETTS
T ss_pred CCCHHHHHHHHHHhCcC------ccc--EEEECCCcHHHHHHHHHCCCeEEEECCC
Confidence 56667788888998842 222 2333223 34456667778877766653
No 167
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=80.24 E-value=2.2 Score=40.74 Aligned_cols=20 Identities=30% Similarity=0.242 Sum_probs=14.4
Q ss_pred hcCccEEEEcCCCceeeecc
Q 041302 160 RHRKLYLILDLDHTLLNSTL 179 (484)
Q Consensus 160 ~~rKL~LVLDLDeTLIhs~~ 179 (484)
..+...+++||||||+.+..
T Consensus 18 ~~~~kli~~DlDGTLl~~~~ 37 (285)
T 3pgv_A 18 QGMYQVVASDLDGTLLSPDH 37 (285)
T ss_dssp ---CCEEEEECCCCCSCTTS
T ss_pred cCcceEEEEeCcCCCCCCCC
Confidence 34567899999999998653
No 168
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=80.13 E-value=2.5 Score=39.80 Aligned_cols=57 Identities=18% Similarity=0.127 Sum_probs=29.6
Q ss_pred ccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhh-hCCeEEEecCCc
Q 041302 163 KLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEAS-EMFEMYIYTMGD 241 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls-~~yEl~IyT~g~ 241 (484)
...+++||||||+.+.. .+ -|...+.|+++. +-..+.|.|.-.
T Consensus 5 ~kli~~DlDGTLl~~~~--~i----------------------------------~~~~~~al~~l~~~G~~~~iaTGR~ 48 (279)
T 3mpo_A 5 IKLIAIDIDGTLLNEKN--EL----------------------------------AQATIDAVQAAKAQGIKVVLCTGRP 48 (279)
T ss_dssp CCEEEECC-----------------------------------------------CHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEEEcCcCCCCCCCC--cC----------------------------------CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 35789999999998754 11 233445666653 346777777766
Q ss_pred HhHHHHHHhhhCCC
Q 041302 242 RPYALEMAKLLDPS 255 (484)
Q Consensus 242 r~YA~~I~~~LDP~ 255 (484)
..-+..+++.++..
T Consensus 49 ~~~~~~~~~~l~~~ 62 (279)
T 3mpo_A 49 LTGVQPYLDAMDID 62 (279)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCC
Confidence 66677777766543
No 169
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=79.90 E-value=1.9 Score=40.32 Aligned_cols=46 Identities=9% Similarity=-0.072 Sum_probs=26.3
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCC-ChHHHHHHhcCCeeeChhh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDAR-TEKSRWAAKEAKFLVDPRW 449 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~-T~K~~~A~~~gi~IV~~~W 449 (484)
.|....+..+++.+|.. ...+++...+ ..-+..|...|++.|...|
T Consensus 187 kp~~~~~~~~~~~~~~~--------~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~ 233 (268)
T 3qgm_A 187 KPSEVIMREALDILGLD--------AKDVAVVGDQIDVDVAAGKAIGAETVLVLT 233 (268)
T ss_dssp TTSHHHHHHHHHHHTCC--------GGGEEEEESCTTTHHHHHHHHTCEEEEESS
T ss_pred CCCHHHHHHHHHHhCCC--------chhEEEECCCchHHHHHHHHCCCcEEEECC
Confidence 56667888888888853 2223333333 2445556667766554444
No 170
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=79.40 E-value=2.9 Score=39.39 Aligned_cols=56 Identities=20% Similarity=0.136 Sum_probs=37.2
Q ss_pred ccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhh-hCCeEEEecCCc
Q 041302 163 KLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEAS-EMFEMYIYTMGD 241 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls-~~yEl~IyT~g~ 241 (484)
...+++||||||+.+.. .++ |...+.|+++. +-..+.|.|.-.
T Consensus 5 ~kli~fDlDGTLl~~~~--~i~----------------------------------~~~~~al~~l~~~G~~~~iaTGR~ 48 (279)
T 4dw8_A 5 YKLIVLDLDGTLTNSKK--EIS----------------------------------SRNRETLIRIQEQGIRLVLASGRP 48 (279)
T ss_dssp CCEEEECCCCCCSCTTS--CCC----------------------------------HHHHHHHHHHHHTTCEEEEECSSC
T ss_pred ceEEEEeCCCCCCCCCC--ccC----------------------------------HHHHHHHHHHHHCCCEEEEEcCCC
Confidence 45799999999997653 121 33456666664 346777777766
Q ss_pred HhHHHHHHhhhCC
Q 041302 242 RPYALEMAKLLDP 254 (484)
Q Consensus 242 r~YA~~I~~~LDP 254 (484)
..-+..+++.+..
T Consensus 49 ~~~~~~~~~~l~~ 61 (279)
T 4dw8_A 49 TYGIVPLANELRM 61 (279)
T ss_dssp HHHHHHHHHHTTG
T ss_pred hHHHHHHHHHhCC
Confidence 6666777766653
No 171
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=79.28 E-value=3 Score=39.87 Aligned_cols=56 Identities=23% Similarity=0.193 Sum_probs=36.4
Q ss_pred cEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhh-CCeEEEecCCcH
Q 041302 164 LYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASE-MFEMYIYTMGDR 242 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~-~yEl~IyT~g~r 242 (484)
..+++||||||+.+.. .+ .|...+.|+++.+ -..+.+.|.-+.
T Consensus 5 kli~~DlDGTLl~~~~--~i----------------------------------~~~~~~al~~l~~~G~~~~iaTGR~~ 48 (288)
T 1nrw_A 5 KLIAIDLDGTLLNSKH--QV----------------------------------SLENENALRQAQRDGIEVVVSTGRAH 48 (288)
T ss_dssp CEEEEECCCCCSCTTS--CC----------------------------------CHHHHHHHHHHHHTTCEEEEECSSCH
T ss_pred EEEEEeCCCCCCCCCC--cc----------------------------------CHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence 4689999999998643 11 2334456666543 466777777777
Q ss_pred hHHHHHHhhhCCC
Q 041302 243 PYALEMAKLLDPS 255 (484)
Q Consensus 243 ~YA~~I~~~LDP~ 255 (484)
..+..+++.+...
T Consensus 49 ~~~~~~~~~l~~~ 61 (288)
T 1nrw_A 49 FDVMSIFEPLGIK 61 (288)
T ss_dssp HHHHHHHGGGTCC
T ss_pred HHHHHHHHHcCCC
Confidence 7777777666443
No 172
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=79.15 E-value=2.9 Score=39.62 Aligned_cols=57 Identities=21% Similarity=0.157 Sum_probs=36.1
Q ss_pred ccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhh-hCCeEEEecCCc
Q 041302 163 KLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEAS-EMFEMYIYTMGD 241 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls-~~yEl~IyT~g~ 241 (484)
...+++||||||+++.. .++ |...+-|+++. +-..++|.|.-.
T Consensus 6 ~kli~fDlDGTLl~~~~--~i~----------------------------------~~~~~al~~l~~~G~~~~iaTGR~ 49 (290)
T 3dnp_A 6 KQLLALNIDGALLRSNG--KIH----------------------------------QATKDAIEYVKKKGIYVTLVTNRH 49 (290)
T ss_dssp CCEEEECCCCCCSCTTS--CCC----------------------------------HHHHHHHHHHHHTTCEEEEBCSSC
T ss_pred ceEEEEcCCCCCCCCCC--ccC----------------------------------HHHHHHHHHHHHCCCEEEEECCCC
Confidence 45799999999998754 222 22345555553 346666766666
Q ss_pred HhHHHHHHhhhCCC
Q 041302 242 RPYALEMAKLLDPS 255 (484)
Q Consensus 242 r~YA~~I~~~LDP~ 255 (484)
..-+..+++.+.+.
T Consensus 50 ~~~~~~~~~~~~~~ 63 (290)
T 3dnp_A 50 FRSAQKIAKSLKLD 63 (290)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHcCCC
Confidence 66666666666654
No 173
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=78.92 E-value=1.6 Score=43.03 Aligned_cols=80 Identities=9% Similarity=-0.022 Sum_probs=55.8
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeEEee---------cCCCCC------cccccc
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARVISR---------DDGTQR------HQKGLD 278 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI~sR---------d~c~~~------~~KdL~ 278 (484)
+.++||+.++|+.+.+. |.+.|.|++...++..+++.+.-.. +|.+.+-.. ++.... +.+=++
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~-~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~ 255 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDY-AQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQ 255 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCe-EEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHH
Confidence 56899999999999875 9999999999999999999988754 665543211 111110 111123
Q ss_pred ccCCCCCcEEEEcCChh
Q 041302 279 VVLGQESAVLILDDTEN 295 (484)
Q Consensus 279 ~l~~~~~~vVIIDD~~~ 295 (484)
.+.-+...++.|+|+..
T Consensus 256 ~lgi~~~~~v~vGDs~n 272 (335)
T 3n28_A 256 QYDVEIHNTVAVGDGAN 272 (335)
T ss_dssp HHTCCGGGEEEEECSGG
T ss_pred HcCCChhhEEEEeCCHH
Confidence 33346678999999864
No 174
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=78.70 E-value=2.6 Score=39.34 Aligned_cols=16 Identities=31% Similarity=0.492 Sum_probs=13.4
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+++..
T Consensus 4 kli~~DlDGTLl~~~~ 19 (258)
T 2pq0_A 4 KIVFFDIDGTLLDEQK 19 (258)
T ss_dssp CEEEECTBTTTBCTTS
T ss_pred eEEEEeCCCCCcCCCC
Confidence 4689999999998753
No 175
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=78.63 E-value=3.2 Score=39.25 Aligned_cols=57 Identities=19% Similarity=0.132 Sum_probs=35.3
Q ss_pred cEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhhCCeEEEecCCcHh
Q 041302 164 LYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASEMFEMYIYTMGDRP 243 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~~yEl~IyT~g~r~ 243 (484)
..+++||||||+++.. .++ |...+.|++..+-..++|.|.-+..
T Consensus 3 kli~~DlDGTLl~~~~--~i~----------------------------------~~~~~al~~~~~Gi~v~iaTGR~~~ 46 (268)
T 1nf2_A 3 RVFVFDLDGTLLNDNL--EIS----------------------------------EKDRRNIEKLSRKCYVVFASGRMLV 46 (268)
T ss_dssp CEEEEECCCCCSCTTS--CCC----------------------------------HHHHHHHHHHTTTSEEEEECSSCHH
T ss_pred cEEEEeCCCcCCCCCC--ccC----------------------------------HHHHHHHHHHhCCCEEEEECCCChH
Confidence 4689999999998643 222 2234555552334667777766666
Q ss_pred HHHHHHhhhCCCC
Q 041302 244 YALEMAKLLDPSR 256 (484)
Q Consensus 244 YA~~I~~~LDP~~ 256 (484)
-+..+++.|...+
T Consensus 47 ~~~~~~~~l~~~~ 59 (268)
T 1nf2_A 47 STLNVEKKYFKRT 59 (268)
T ss_dssp HHHHHHHHHSSSC
T ss_pred HHHHHHHHhCCCC
Confidence 6666666665543
No 176
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=77.64 E-value=1.3 Score=39.84 Aligned_cols=99 Identities=10% Similarity=0.015 Sum_probs=56.1
Q ss_pred CccEEEEcCCCceeeeccCCCCChhhhhhhccccccccccccceeeeeceeEEEEecccHHHHHHHhhh-CCeEEEecCC
Q 041302 162 RKLYLILDLDHTLLNSTLLLHLTPEEDYLKSQADSLQDVSKGSLFMLAFMNMMTKLRPFVHTFLKEASE-MFEMYIYTMG 240 (484)
Q Consensus 162 rKL~LVLDLDeTLIhs~~~~~~~~~e~~~~~~~~~~~d~~~~~~f~l~~~~~~vklRPgl~eFL~~ls~-~yEl~IyT~g 240 (484)
+-..||+|+|+||...... +++. .. ..-.+.+|.+. .|+.|.+ -+.+.|-|+.
T Consensus 8 ~ikliv~D~DGtL~d~~~~--~~~~----------------g~------~~~~f~~~D~~--~L~~Lk~~Gi~~~I~Tg~ 61 (168)
T 3ewi_A 8 EIKLLVCNIDGCLTNGHIY--VSGD----------------QK------EIISYDVKDAI--GISLLKKSGIEVRLISER 61 (168)
T ss_dssp CCCEEEEECCCCCSCSCCB--CCSS----------------CC------CEEEEEHHHHH--HHHHHHHTTCEEEEECSS
T ss_pred cCcEEEEeCccceECCcEE--EcCC----------------CC------EEEEEecCcHH--HHHHHHHCCCEEEEEeCc
Confidence 3458999999999976541 1110 00 01123444443 5777754 5999999988
Q ss_pred cHhHHHHHHh--hhCCCCcccceeEEeecCCCCCccccc-cccCCCCCcEEEEcCChh
Q 041302 241 DRPYALEMAK--LLDPSREYFNARVISRDDGTQRHQKGL-DVVLGQESAVLILDDTEN 295 (484)
Q Consensus 241 ~r~YA~~I~~--~LDP~~~~F~~RI~sRd~c~~~~~KdL-~~l~~~~~~vVIIDD~~~ 295 (484)
..+..+++ .|+-. +|.. ..+ ....++.+ +.+.-+...++.|.|...
T Consensus 62 --~~~~~~l~~l~lgi~--~~~g----~~~-K~~~l~~~~~~~gi~~~~~~~vGD~~n 110 (168)
T 3ewi_A 62 --ACSKQTLSALKLDCK--TEVS----VSD-KLATVDEWRKEMGLCWKEVAYLGNEVS 110 (168)
T ss_dssp --CCCHHHHHTTCCCCC--EECS----CSC-HHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred --HHHHHHHHHhCCCcE--EEEC----CCC-hHHHHHHHHHHcCcChHHEEEEeCCHh
Confidence 78889998 45433 3321 110 00112222 223335678999999764
No 177
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=77.27 E-value=3 Score=39.84 Aligned_cols=15 Identities=33% Similarity=0.476 Sum_probs=12.9
Q ss_pred cEEEEcCCCceeeec
Q 041302 164 LYLILDLDHTLLNST 178 (484)
Q Consensus 164 L~LVLDLDeTLIhs~ 178 (484)
..+++||||||+.+.
T Consensus 6 kli~~DlDGTLl~~~ 20 (282)
T 1rkq_A 6 KLIAIDMDGTLLLPD 20 (282)
T ss_dssp CEEEECCCCCCSCTT
T ss_pred eEEEEeCCCCCCCCC
Confidence 479999999999864
No 178
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=77.00 E-value=2.8 Score=39.13 Aligned_cols=46 Identities=7% Similarity=0.027 Sum_probs=27.5
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCC-ChHHHHHHhcCCeeeChhh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDAR-TEKSRWAAKEAKFLVDPRW 449 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~-T~K~~~A~~~gi~IV~~~W 449 (484)
.|....+..+++.+|.. -..+|+...+ ..=+..|...|+.+|...|
T Consensus 195 kpk~~~~~~~~~~lgi~--------~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~ 241 (271)
T 1vjr_A 195 KPNPLVVDVISEKFGVP--------KERMAMVGDRLYTDVKLGKNAGIVSILVLT 241 (271)
T ss_dssp TTSTHHHHHHHHHHTCC--------GGGEEEEESCHHHHHHHHHHHTCEEEEESS
T ss_pred CCCHHHHHHHHHHhCCC--------CceEEEECCCcHHHHHHHHHcCCeEEEECC
Confidence 45667888888888843 1223444333 2445566667877766555
No 179
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=76.47 E-value=2.9 Score=39.34 Aligned_cols=14 Identities=29% Similarity=0.570 Sum_probs=11.8
Q ss_pred cEEEEcCCCceeee
Q 041302 164 LYLILDLDHTLLNS 177 (484)
Q Consensus 164 L~LVLDLDeTLIhs 177 (484)
..+++|||+||++.
T Consensus 2 k~i~~D~DGtL~~~ 15 (263)
T 1zjj_A 2 VAIIFDMDGVLYRG 15 (263)
T ss_dssp EEEEEECBTTTEET
T ss_pred eEEEEeCcCceEeC
Confidence 36899999999974
No 180
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=76.12 E-value=3.1 Score=39.36 Aligned_cols=17 Identities=24% Similarity=0.456 Sum_probs=13.7
Q ss_pred CccEEEEcCCCceeeec
Q 041302 162 RKLYLILDLDHTLLNST 178 (484)
Q Consensus 162 rKL~LVLDLDeTLIhs~ 178 (484)
+...+++||||||++..
T Consensus 12 ~~kli~~DlDGTLl~~~ 28 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPAR 28 (262)
T ss_dssp -CEEEEEESBTTTBSTT
T ss_pred CeEEEEEeCccCCCCCC
Confidence 45679999999999864
No 181
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=75.82 E-value=3.3 Score=39.42 Aligned_cols=20 Identities=20% Similarity=0.203 Sum_probs=15.3
Q ss_pred hcCccEEEEcCCCceeeecc
Q 041302 160 RHRKLYLILDLDHTLLNSTL 179 (484)
Q Consensus 160 ~~rKL~LVLDLDeTLIhs~~ 179 (484)
..+...+++||||||+.+..
T Consensus 18 ~~~~kli~~DlDGTLl~~~~ 37 (283)
T 3dao_A 18 QGMIKLIATDIDGTLVKDGS 37 (283)
T ss_dssp -CCCCEEEECCBTTTBSTTC
T ss_pred ccCceEEEEeCcCCCCCCCC
Confidence 44567899999999997653
No 182
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=74.76 E-value=3.7 Score=39.57 Aligned_cols=47 Identities=11% Similarity=0.023 Sum_probs=26.6
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRW 449 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~W 449 (484)
.|....+..+++.+|.. +.-+ ++..+....-+..|...|+..|...|
T Consensus 215 KP~~~~~~~~~~~lgi~------~~e~-l~vGD~~~~Di~~a~~aG~~~i~v~~ 261 (306)
T 2oyc_A 215 KPSPYMFECITENFSID------PART-LMVGDRLETDILFGHRCGMTTVLTLT 261 (306)
T ss_dssp TTSTHHHHHHHHHSCCC------GGGE-EEEESCTTTHHHHHHHHTCEEEEESS
T ss_pred CCCHHHHHHHHHHcCCC------hHHE-EEECCCchHHHHHHHHCCCeEEEECC
Confidence 46667788888888742 2212 33333322455566777877665444
No 183
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=74.18 E-value=3.8 Score=38.83 Aligned_cols=51 Identities=10% Similarity=-0.064 Sum_probs=27.4
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRW 449 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~W 449 (484)
+|....+...++.++.. ..+++. .-++..+.-..-+..|.+.|++.|...|
T Consensus 204 KP~p~~~~~a~~~l~~~--~~~~~~-~~~~VGD~~~~Di~~A~~aG~~~i~v~~ 254 (284)
T 2hx1_A 204 KPDSQMFMFAYDMLRQK--MEISKR-EILMVGDTLHTDILGGNKFGLDTALVLT 254 (284)
T ss_dssp TTSSHHHHHHHHHHHTT--SCCCGG-GEEEEESCTTTHHHHHHHHTCEEEEESS
T ss_pred CCCHHHHHHHHHHHhhc--cCCCcc-eEEEECCCcHHHHHHHHHcCCeEEEECC
Confidence 56666777777887210 012222 2233333323456677778887765554
No 184
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=73.51 E-value=1.9 Score=40.33 Aligned_cols=50 Identities=6% Similarity=-0.085 Sum_probs=29.6
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCC-ChHHHHHHhcCCeeeChhhHHHH
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDAR-TEKSRWAAKEAKFLVDPRWIETA 453 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~-T~K~~~A~~~gi~IV~~~WL~~c 453 (484)
.|....+..+++.+|.. + ..+|+...+ ..-+..|...|+..|...|=...
T Consensus 183 kp~~~~~~~~~~~lgi~------~--~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~ 233 (266)
T 3pdw_A 183 KPESIIMEQAMRVLGTD------V--SETLMVGDNYATDIMAGINAGMDTLLVHTGVTK 233 (266)
T ss_dssp TTSSHHHHHHHHHHTCC------G--GGEEEEESCTTTHHHHHHHHTCEEEEECCC---
T ss_pred CCCHHHHHHHHHHcCCC------h--hhEEEECCCcHHHHHHHHHCCCeEEEECCCCCC
Confidence 45667888899999843 2 223443333 34455667788888777774433
No 185
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=73.33 E-value=4 Score=37.52 Aligned_cols=47 Identities=9% Similarity=0.082 Sum_probs=27.3
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRW 449 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~W 449 (484)
.|....+..+++.+|.. +.-+ ++..+....=+..|...|++.|...|
T Consensus 179 Kp~~~~~~~~~~~lgi~------~~~~-~~iGD~~~~Di~~a~~aG~~~i~v~~ 225 (259)
T 2ho4_A 179 KPEKTFFLEALRDADCA------PEEA-VMIGDDCRDDVDGAQNIGMLGILVKT 225 (259)
T ss_dssp TTSHHHHHHHGGGGTCC------GGGE-EEEESCTTTTHHHHHHTTCEEEEESS
T ss_pred CCCHHHHHHHHHHcCCC------hHHE-EEECCCcHHHHHHHHHCCCcEEEECC
Confidence 46667777778888732 2211 23333322455667778888776655
No 186
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=73.14 E-value=2.5 Score=39.59 Aligned_cols=15 Identities=47% Similarity=0.645 Sum_probs=12.7
Q ss_pred cEEEEcCCCceeeec
Q 041302 164 LYLILDLDHTLLNST 178 (484)
Q Consensus 164 L~LVLDLDeTLIhs~ 178 (484)
..+++||||||++..
T Consensus 4 ~li~~DlDGTLl~~~ 18 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQ 18 (244)
T ss_dssp EEEEECTBTTTBSCH
T ss_pred eEEEEeCCCCCcCCH
Confidence 479999999999854
No 187
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=73.14 E-value=4.3 Score=35.55 Aligned_cols=48 Identities=13% Similarity=0.054 Sum_probs=38.7
Q ss_pred EEecccHHHHHHHhhhC-CeEEEecCCcHhHHHHHHhhhCCCCcccceeE
Q 041302 215 TKLRPFVHTFLKEASEM-FEMYIYTMGDRPYALEMAKLLDPSREYFNARV 263 (484)
Q Consensus 215 vklRPgl~eFL~~ls~~-yEl~IyT~g~r~YA~~I~~~LDP~~~~F~~RI 263 (484)
..+.|++.++|+.+.+. +.+.|+|++...++..+++.+.... +|.+.+
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~-~~~~~~ 123 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY-AFANRL 123 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSE-EEEEEE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCe-EEEeee
Confidence 45789999999999765 8999999999999999888876643 554433
No 188
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=72.78 E-value=1.3 Score=39.05 Aligned_cols=17 Identities=35% Similarity=0.696 Sum_probs=14.1
Q ss_pred CccEEEEcCCCceeeec
Q 041302 162 RKLYLILDLDHTLLNST 178 (484)
Q Consensus 162 rKL~LVLDLDeTLIhs~ 178 (484)
+...+++||||||+++.
T Consensus 4 ~~k~i~fDlDGTL~d~~ 20 (211)
T 1l7m_A 4 KKKLILFDFDSTLVNNE 20 (211)
T ss_dssp CCEEEEEECCCCCBSSC
T ss_pred CCcEEEEeCCCCCCCcc
Confidence 34578999999999984
No 189
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=71.77 E-value=5.5 Score=37.01 Aligned_cols=17 Identities=24% Similarity=0.303 Sum_probs=14.3
Q ss_pred CccEEEEcCCCceeeec
Q 041302 162 RKLYLILDLDHTLLNST 178 (484)
Q Consensus 162 rKL~LVLDLDeTLIhs~ 178 (484)
++..+++||||||+...
T Consensus 5 ~~kli~~DlDGTLl~~~ 21 (246)
T 2amy_A 5 GPALCLFDVDGTLTAPR 21 (246)
T ss_dssp CSEEEEEESBTTTBCTT
T ss_pred CceEEEEECCCCcCCCC
Confidence 46789999999999764
No 190
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=69.57 E-value=1.5 Score=38.24 Aligned_cols=16 Identities=25% Similarity=0.376 Sum_probs=13.1
Q ss_pred ccEEEEcCCCceeeec
Q 041302 163 KLYLILDLDHTLLNST 178 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~ 178 (484)
|+.+++||||||+++.
T Consensus 9 k~ivifDlDGTL~d~~ 24 (201)
T 4ap9_A 9 KKVAVIDIEGTLTDFE 24 (201)
T ss_dssp SCEEEEECBTTTBCCC
T ss_pred ceeEEecccCCCcchH
Confidence 5666699999999765
No 191
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=68.73 E-value=6.2 Score=36.13 Aligned_cols=15 Identities=27% Similarity=0.363 Sum_probs=13.2
Q ss_pred cEEEEcCCCceeeec
Q 041302 164 LYLILDLDHTLLNST 178 (484)
Q Consensus 164 L~LVLDLDeTLIhs~ 178 (484)
..+++||||||+++.
T Consensus 13 k~i~fDlDGTLl~s~ 27 (271)
T 2x4d_A 13 RGVLLDISGVLYDSG 27 (271)
T ss_dssp CEEEECCBTTTEECC
T ss_pred CEEEEeCCCeEEecC
Confidence 478999999999974
No 192
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=68.63 E-value=6.1 Score=38.31 Aligned_cols=15 Identities=33% Similarity=0.494 Sum_probs=13.0
Q ss_pred ccEEEEcCCCceeee
Q 041302 163 KLYLILDLDHTLLNS 177 (484)
Q Consensus 163 KL~LVLDLDeTLIhs 177 (484)
...+++||||||+..
T Consensus 27 ikli~~DlDGTLl~~ 41 (301)
T 2b30_A 27 IKLLLIDFDGTLFVD 41 (301)
T ss_dssp CCEEEEETBTTTBCC
T ss_pred ccEEEEECCCCCcCC
Confidence 357899999999987
No 193
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=67.57 E-value=5.2 Score=37.20 Aligned_cols=47 Identities=6% Similarity=-0.041 Sum_probs=28.7
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRW 449 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~W 449 (484)
+|....+...++.+|.. +.- -++..+.-..-+..|.+.|+..|...|
T Consensus 183 KP~p~~~~~~~~~~~~~------~~~-~~~vGD~~~~Di~~a~~aG~~~i~v~~ 229 (264)
T 1yv9_A 183 KPKAIIMERAIAHLGVE------KEQ-VIMVGDNYETDIQSGIQNGIDSLLVTS 229 (264)
T ss_dssp TTSHHHHHHHHHHHCSC------GGG-EEEEESCTTTHHHHHHHHTCEEEEETT
T ss_pred CCCHHHHHHHHHHcCCC------HHH-EEEECCCcHHHHHHHHHcCCcEEEECC
Confidence 56777888888888742 222 233333323456677778988766555
No 194
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=67.39 E-value=1.7 Score=39.06 Aligned_cols=18 Identities=28% Similarity=0.397 Sum_probs=15.3
Q ss_pred CccEEEEcCCCceeeecc
Q 041302 162 RKLYLILDLDHTLLNSTL 179 (484)
Q Consensus 162 rKL~LVLDLDeTLIhs~~ 179 (484)
++..+++||||||+.+..
T Consensus 3 ~~k~viFDlDGTL~Ds~~ 20 (197)
T 1q92_A 3 RALRVLVDMDGVLADFEG 20 (197)
T ss_dssp CCEEEEECSBTTTBCHHH
T ss_pred CceEEEEeCCCCCccCcH
Confidence 456899999999999864
No 195
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=67.30 E-value=5.2 Score=37.43 Aligned_cols=35 Identities=17% Similarity=0.146 Sum_probs=24.6
Q ss_pred HHHHHHHhh-hCCeEEEecCCcHhHHHHHHhhhCCC
Q 041302 221 VHTFLKEAS-EMFEMYIYTMGDRPYALEMAKLLDPS 255 (484)
Q Consensus 221 l~eFL~~ls-~~yEl~IyT~g~r~YA~~I~~~LDP~ 255 (484)
..+.|+++. +-..++|.|.-....+..+++.+...
T Consensus 22 ~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 22 AKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp GHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 346677764 45778888877777777888777654
No 196
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=67.14 E-value=1.6 Score=41.07 Aligned_cols=16 Identities=31% Similarity=0.387 Sum_probs=13.4
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+++..
T Consensus 3 kli~~DlDGTLl~~~~ 18 (261)
T 2rbk_A 3 KALFFDIDGTLVSFET 18 (261)
T ss_dssp CEEEECSBTTTBCTTT
T ss_pred cEEEEeCCCCCcCCCC
Confidence 4689999999998754
No 197
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=65.71 E-value=8.2 Score=36.37 Aligned_cols=17 Identities=35% Similarity=0.620 Sum_probs=14.1
Q ss_pred ccEEEEcCCCceeeecc
Q 041302 163 KLYLILDLDHTLLNSTL 179 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~ 179 (484)
...+++||||||+++..
T Consensus 4 ~kli~~DlDGTLl~~~~ 20 (246)
T 3f9r_A 4 RVLLLFDVDGTLTPPRL 20 (246)
T ss_dssp SEEEEECSBTTTBSTTS
T ss_pred ceEEEEeCcCCcCCCCC
Confidence 46789999999998653
No 198
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=63.98 E-value=4.9 Score=37.99 Aligned_cols=16 Identities=31% Similarity=0.490 Sum_probs=13.3
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+++..
T Consensus 4 kli~~DlDGTLl~~~~ 19 (271)
T 1rlm_A 4 KVIVTDMDGTFLNDAK 19 (271)
T ss_dssp CEEEECCCCCCSCTTS
T ss_pred cEEEEeCCCCCCCCCC
Confidence 4789999999998643
No 199
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=62.53 E-value=2.9 Score=36.93 Aligned_cols=17 Identities=29% Similarity=0.364 Sum_probs=14.1
Q ss_pred ccEEEEcCCCceeeecc
Q 041302 163 KLYLILDLDHTLLNSTL 179 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~ 179 (484)
...+++||||||+++..
T Consensus 6 ~k~v~fDlDGTL~d~~~ 22 (225)
T 3d6j_A 6 YTVYLFDFDYTLADSSR 22 (225)
T ss_dssp CSEEEECCBTTTEECHH
T ss_pred CCEEEEeCCCCCCCCHH
Confidence 35789999999998753
No 200
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=62.42 E-value=2.3 Score=37.46 Aligned_cols=17 Identities=18% Similarity=0.344 Sum_probs=14.5
Q ss_pred ccEEEEcCCCceeeecc
Q 041302 163 KLYLILDLDHTLLNSTL 179 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~ 179 (484)
+..+++||||||+.+..
T Consensus 4 ~~~viFD~DGtL~Ds~~ 20 (180)
T 3bwv_A 4 RQRIAIDMDEVLADTLG 20 (180)
T ss_dssp CCEEEEETBTTTBCHHH
T ss_pred ccEEEEeCCCcccccHH
Confidence 35799999999999874
No 201
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=60.84 E-value=6.5 Score=40.17 Aligned_cols=51 Identities=8% Similarity=0.046 Sum_probs=41.4
Q ss_pred EEEecccHHHHHHHhh-hCCeEEEecCCcHhHHHHHHhhhCC-----CCcccceeEE
Q 041302 214 MTKLRPFVHTFLKEAS-EMFEMYIYTMGDRPYALEMAKLLDP-----SREYFNARVI 264 (484)
Q Consensus 214 ~vklRPgl~eFL~~ls-~~yEl~IyT~g~r~YA~~I~~~LDP-----~~~~F~~RI~ 264 (484)
.++++|+..++++.|. .-+.++|.|.|....+..|++.|.. ...++++++.
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~ 275 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLM 275 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEE
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEE
Confidence 4789999999999995 5699999999999999999997642 2235666654
No 202
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=59.79 E-value=2.9 Score=36.26 Aligned_cols=48 Identities=6% Similarity=-0.121 Sum_probs=31.2
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhhHHHH
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRWIETA 453 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~WL~~c 453 (484)
.|....+..+++.+|.. .+++...+..-+..|...|+.+|...|-...
T Consensus 137 kp~~~~~~~~~~~~~~~----------~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~ 184 (190)
T 2fi1_A 137 KPNPESMLYLREKYQIS----------SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNL 184 (190)
T ss_dssp TTSCHHHHHHHHHTTCS----------SEEEEESSHHHHHHHHHTTCEEEECSCHHHH
T ss_pred CCCHHHHHHHHHHcCCC----------eEEEEcCCHHHHHHHHHcCCeEEEECCCCCh
Confidence 45667888888888854 2344333345556667789888877775543
No 203
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=59.72 E-value=3.1 Score=39.57 Aligned_cols=17 Identities=24% Similarity=0.372 Sum_probs=14.5
Q ss_pred CccEEEEcCCCceeeec
Q 041302 162 RKLYLILDLDHTLLNST 178 (484)
Q Consensus 162 rKL~LVLDLDeTLIhs~ 178 (484)
....+++||||||+.+.
T Consensus 21 ~~kliifDlDGTLlds~ 37 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPHT 37 (289)
T ss_dssp CSEEEEEETBTTTBCSS
T ss_pred CCeEEEEECCCCCcCCC
Confidence 35689999999999975
No 204
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=59.72 E-value=6 Score=36.88 Aligned_cols=35 Identities=17% Similarity=0.155 Sum_probs=20.1
Q ss_pred cccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhh
Q 041302 218 RPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLL 252 (484)
Q Consensus 218 RPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~L 252 (484)
-|...+.|+++.+.-.++|-|.-+...+..+++.+
T Consensus 25 ~~~~~~al~~l~~~g~v~iaTGR~~~~~~~~~~~l 59 (239)
T 1u02_A 25 DAGLLSLISDLKERFDTYIVTGRSPEEISRFLPLD 59 (239)
T ss_dssp CHHHHHHHHHHHHHSEEEEECSSCHHHHHHHSCSS
T ss_pred CHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHhccc
Confidence 35566777777543366666655555555555443
No 205
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=59.58 E-value=3.4 Score=36.97 Aligned_cols=17 Identities=29% Similarity=0.528 Sum_probs=14.2
Q ss_pred ccEEEEcCCCceeeecc
Q 041302 163 KLYLILDLDHTLLNSTL 179 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~ 179 (484)
...+++||||||+++..
T Consensus 4 ~k~iifDlDGTL~d~~~ 20 (234)
T 2hcf_A 4 RTLVLFDIDGTLLKVES 20 (234)
T ss_dssp CEEEEECCBTTTEEECT
T ss_pred ceEEEEcCCCCcccCcc
Confidence 35789999999999864
No 206
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=59.41 E-value=3.3 Score=35.83 Aligned_cols=16 Identities=50% Similarity=0.501 Sum_probs=13.6
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+.+..
T Consensus 5 k~i~fDlDGTL~~~~~ 20 (207)
T 2go7_A 5 TAFIWDLDGTLLDSYE 20 (207)
T ss_dssp CEEEECTBTTTEECHH
T ss_pred cEEEEeCCCcccccHH
Confidence 4789999999998754
No 207
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=58.82 E-value=3.7 Score=36.88 Aligned_cols=47 Identities=9% Similarity=0.077 Sum_probs=29.6
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhhH
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRWI 450 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~WL 450 (484)
.|....+...++.+|.. +. .+|+......-+..|.+.|++.|...|-
T Consensus 137 Kp~p~~~~~~~~~lg~~------p~--~~~~vgDs~~Di~~a~~aG~~~i~v~~~ 183 (210)
T 2ah5_A 137 PHKADVIHQALQTHQLA------PE--QAIIIGDTKFDMLGARETGIQKLAITWG 183 (210)
T ss_dssp CSHHHHHHHHHHHTTCC------GG--GEEEEESSHHHHHHHHHHTCEEEEESSS
T ss_pred CCChHHHHHHHHHcCCC------cc--cEEEECCCHHHHHHHHHCCCcEEEEcCC
Confidence 67777888888888843 22 2233323345566777789887766663
No 208
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=58.04 E-value=3.2 Score=38.92 Aligned_cols=15 Identities=40% Similarity=0.629 Sum_probs=12.9
Q ss_pred cEEEEcCCCceeeec
Q 041302 164 LYLILDLDHTLLNST 178 (484)
Q Consensus 164 L~LVLDLDeTLIhs~ 178 (484)
+.+++||||||+.+.
T Consensus 1 ~li~~DlDGTLl~~~ 15 (259)
T 3zx4_A 1 MIVFTDLDGTLLDER 15 (259)
T ss_dssp CEEEECCCCCCSCSS
T ss_pred CEEEEeCCCCCcCCC
Confidence 468999999999775
No 209
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=57.98 E-value=3.6 Score=36.44 Aligned_cols=47 Identities=11% Similarity=0.017 Sum_probs=27.8
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhhH
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRWI 450 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~WL 450 (484)
+|....+..+++.+|... ..+|+...+..-+..|...|+.++...|-
T Consensus 138 KP~~~~~~~~~~~~~~~~--------~~~i~vGD~~~Di~~a~~aG~~~~~~~~~ 184 (209)
T 2hdo_A 138 KPDPLPLLTALEKVNVAP--------QNALFIGDSVSDEQTAQAANVDFGLAVWG 184 (209)
T ss_dssp TTSSHHHHHHHHHTTCCG--------GGEEEEESSHHHHHHHHHHTCEEEEEGGG
T ss_pred CCCcHHHHHHHHHcCCCc--------ccEEEECCChhhHHHHHHcCCeEEEEcCC
Confidence 566677788888887421 22333333344455666678887766553
No 210
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=57.82 E-value=3.3 Score=38.57 Aligned_cols=17 Identities=41% Similarity=0.497 Sum_probs=14.4
Q ss_pred ccEEEEcCCCceeeecc
Q 041302 163 KLYLILDLDHTLLNSTL 179 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~ 179 (484)
...+++||||||+.+..
T Consensus 5 ~kli~fDlDGTLl~~~~ 21 (274)
T 3fzq_A 5 YKLLILDIDGTLRDEVY 21 (274)
T ss_dssp CCEEEECSBTTTBBTTT
T ss_pred ceEEEEECCCCCCCCCC
Confidence 35789999999998865
No 211
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=57.70 E-value=3.4 Score=37.77 Aligned_cols=17 Identities=29% Similarity=0.585 Sum_probs=14.4
Q ss_pred ccEEEEcCCCceeeecc
Q 041302 163 KLYLILDLDHTLLNSTL 179 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~ 179 (484)
...+++||||||+.+..
T Consensus 11 ~k~viFDlDGTL~ds~~ 27 (231)
T 2p11_A 11 DIVFLFDCDNTLLDNDH 27 (231)
T ss_dssp SEEEEECCBTTTBCHHH
T ss_pred CeEEEEcCCCCCEecHH
Confidence 45899999999998764
No 212
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=57.32 E-value=3.8 Score=36.21 Aligned_cols=15 Identities=27% Similarity=0.408 Sum_probs=13.1
Q ss_pred EEEEcCCCceeeecc
Q 041302 165 YLILDLDHTLLNSTL 179 (484)
Q Consensus 165 ~LVLDLDeTLIhs~~ 179 (484)
.+++||||||+.+..
T Consensus 3 ~iiFDlDGTL~d~~~ 17 (201)
T 2w43_A 3 ILAFDIFGTVLDTST 17 (201)
T ss_dssp EEEECCBTTTEEGGG
T ss_pred EEEEeCCCceecchh
Confidence 689999999999764
No 213
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=57.17 E-value=3.9 Score=36.18 Aligned_cols=16 Identities=19% Similarity=0.333 Sum_probs=13.9
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+.+..
T Consensus 6 k~iiFDlDGTL~d~~~ 21 (211)
T 2i6x_A 6 RNIVFDLGGVLIHLNR 21 (211)
T ss_dssp SEEEECSBTTTEEECH
T ss_pred eEEEEeCCCeeEecch
Confidence 5799999999998864
No 214
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=56.98 E-value=3.5 Score=35.97 Aligned_cols=45 Identities=7% Similarity=0.010 Sum_probs=25.5
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPR 448 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~ 448 (484)
.|....+..+++.+|.. + ..+++...+..-+..|...|+++|...
T Consensus 145 kp~~~~~~~~~~~~~~~------~--~~~~~iGD~~~Di~~a~~aG~~~~~~~ 189 (214)
T 3e58_A 145 KPNPEIYLTALKQLNVQ------A--SRALIIEDSEKGIAAGVAADVEVWAIR 189 (214)
T ss_dssp TTSSHHHHHHHHHHTCC------G--GGEEEEECSHHHHHHHHHTTCEEEEEC
T ss_pred CCChHHHHHHHHHcCCC------h--HHeEEEeccHhhHHHHHHCCCEEEEEC
Confidence 45566777777777742 1 223333333445566677787766544
No 215
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=56.47 E-value=3.9 Score=36.43 Aligned_cols=16 Identities=31% Similarity=0.505 Sum_probs=13.7
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+++..
T Consensus 5 k~i~fDlDGTL~d~~~ 20 (229)
T 2fdr_A 5 DLIIFDCDGVLVDSEI 20 (229)
T ss_dssp SEEEECSBTTTBCCHH
T ss_pred cEEEEcCCCCcCccHH
Confidence 5789999999998764
No 216
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=56.11 E-value=3.7 Score=36.27 Aligned_cols=17 Identities=35% Similarity=0.448 Sum_probs=14.0
Q ss_pred ccEEEEcCCCceeeecc
Q 041302 163 KLYLILDLDHTLLNSTL 179 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~ 179 (484)
...+++|||+||+.+..
T Consensus 9 ~k~i~fDlDGTL~~~~~ 25 (226)
T 1te2_A 9 ILAAIFDMDGLLIDSEP 25 (226)
T ss_dssp CCEEEECCBTTTBCCHH
T ss_pred CCEEEECCCCCcCcCHH
Confidence 35789999999997753
No 217
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=56.02 E-value=3.8 Score=36.81 Aligned_cols=46 Identities=4% Similarity=-0.115 Sum_probs=27.6
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCC-ChHHHHHHhcCCeeeChhh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDAR-TEKSRWAAKEAKFLVDPRW 449 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~-T~K~~~A~~~gi~IV~~~W 449 (484)
.|....+..+++.+|.. + ..+++-..+ ..=+..|...|+.++...|
T Consensus 176 kpk~~~~~~~~~~lgi~------~--~~~i~iGD~~~nDi~~~~~aG~~~~~v~~ 222 (250)
T 2c4n_A 176 KPSPWIIRAALNKMQAH------S--EETVIVGDNLRTDILAGFQAGLETILVLS 222 (250)
T ss_dssp TTSTHHHHHHHHHHTCC------G--GGEEEEESCTTTHHHHHHHTTCEEEEESS
T ss_pred CCCHHHHHHHHHHcCCC------c--ceEEEECCCchhHHHHHHHcCCeEEEECC
Confidence 45567888888888842 1 233444334 3455666777877665555
No 218
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=55.77 E-value=4.5 Score=36.08 Aligned_cols=17 Identities=41% Similarity=0.548 Sum_probs=14.2
Q ss_pred ccEEEEcCCCceeeecc
Q 041302 163 KLYLILDLDHTLLNSTL 179 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~ 179 (484)
...+++||||||+.+..
T Consensus 6 ~k~i~fDlDGTL~~~~~ 22 (233)
T 3s6j_A 6 QTSFIFDLDGTLTDSVY 22 (233)
T ss_dssp CCEEEECCBTTTEECHH
T ss_pred CcEEEEcCCCccccChH
Confidence 46899999999998753
No 219
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=55.63 E-value=3.2 Score=36.68 Aligned_cols=16 Identities=19% Similarity=0.362 Sum_probs=13.3
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+.+..
T Consensus 3 k~i~fDlDGTL~d~~~ 18 (221)
T 2wf7_A 3 KAVLFDLDGVITDTAE 18 (221)
T ss_dssp CEEEECCBTTTBTHHH
T ss_pred cEEEECCCCcccCChH
Confidence 4689999999998753
No 220
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=55.40 E-value=4.2 Score=35.72 Aligned_cols=49 Identities=12% Similarity=-0.036 Sum_probs=27.3
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhhHHH
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRWIET 452 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~WL~~ 452 (484)
.|....+..+++.+|.. +.- +|+...+..-+..|...|+.+|...|-..
T Consensus 141 Kp~~~~~~~~~~~~~~~------~~~--~~~vgD~~~Di~~a~~aG~~~~~~~~~~~ 189 (200)
T 3cnh_A 141 KPNPAMYRLGLTLAQVR------PEE--AVMVDDRLQNVQAARAVGMHAVQCVDAAQ 189 (200)
T ss_dssp TTCHHHHHHHHHHHTCC------GGG--EEEEESCHHHHHHHHHTTCEEEECSCHHH
T ss_pred CCCHHHHHHHHHHcCCC------HHH--eEEeCCCHHHHHHHHHCCCEEEEECCchh
Confidence 45556667777777743 221 22222223346667777887776666544
No 221
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=55.24 E-value=3.9 Score=36.46 Aligned_cols=17 Identities=41% Similarity=0.563 Sum_probs=13.9
Q ss_pred ccEEEEcCCCceeeecc
Q 041302 163 KLYLILDLDHTLLNSTL 179 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~ 179 (484)
...+++||||||+.+..
T Consensus 4 ~k~i~fDlDGTL~d~~~ 20 (226)
T 3mc1_A 4 YNYVLFDLDGTLTDSAE 20 (226)
T ss_dssp CCEEEECSBTTTBCCHH
T ss_pred CCEEEEeCCCccccCHH
Confidence 35789999999998753
No 222
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=55.12 E-value=3.9 Score=37.57 Aligned_cols=16 Identities=31% Similarity=0.165 Sum_probs=13.8
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+++..
T Consensus 14 k~iifDlDGTL~d~~~ 29 (251)
T 2pke_A 14 QLVGFDGDDTLWKSED 29 (251)
T ss_dssp CEEEECCBTTTBCCHH
T ss_pred eEEEEeCCCCCccCcH
Confidence 5799999999998754
No 223
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=54.97 E-value=4.2 Score=35.66 Aligned_cols=16 Identities=31% Similarity=0.526 Sum_probs=13.1
Q ss_pred ccEEEEcCCCceeeec
Q 041302 163 KLYLILDLDHTLLNST 178 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~ 178 (484)
...+++||||||+.+.
T Consensus 4 ik~i~fDlDGTL~d~~ 19 (219)
T 3kd3_A 4 MKNIIFDFDSTLIKKE 19 (219)
T ss_dssp CEEEEECCCCCCBSSC
T ss_pred ceEEEEeCCCCCcCcc
Confidence 3578899999999754
No 224
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=54.78 E-value=4.4 Score=36.47 Aligned_cols=19 Identities=37% Similarity=0.398 Sum_probs=15.2
Q ss_pred cCccEEEEcCCCceeeecc
Q 041302 161 HRKLYLILDLDHTLLNSTL 179 (484)
Q Consensus 161 ~rKL~LVLDLDeTLIhs~~ 179 (484)
.+-..+++||||||+.+..
T Consensus 17 ~~ik~i~fDlDGTL~d~~~ 35 (237)
T 4ex6_A 17 AADRGVILDLDGTLADTPA 35 (237)
T ss_dssp CCCEEEEECSBTTTBCCHH
T ss_pred ccCCEEEEcCCCCCcCCHH
Confidence 3456899999999998753
No 225
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=54.41 E-value=4.3 Score=36.53 Aligned_cols=16 Identities=25% Similarity=0.204 Sum_probs=13.5
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+.+..
T Consensus 5 k~viFDlDGTL~d~~~ 20 (232)
T 1zrn_A 5 KGIAFDLYGTLFDVHS 20 (232)
T ss_dssp CEEEECSBTTTEETHH
T ss_pred eEEEEecCCcccCchh
Confidence 4789999999998653
No 226
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=54.34 E-value=4.5 Score=35.80 Aligned_cols=16 Identities=25% Similarity=0.306 Sum_probs=13.8
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+++..
T Consensus 9 k~i~fDlDGTL~~~~~ 24 (234)
T 3ddh_A 9 KVIAFDADDTLWSNEP 24 (234)
T ss_dssp CEEEECCBTTTBCCHH
T ss_pred cEEEEeCCCCCccCcc
Confidence 5789999999998764
No 227
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=54.33 E-value=4.8 Score=37.05 Aligned_cols=16 Identities=44% Similarity=0.436 Sum_probs=13.6
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+.+..
T Consensus 24 k~iiFDlDGTL~d~~~ 39 (243)
T 2hsz_A 24 KLIGFDLDGTLVNSLP 39 (243)
T ss_dssp SEEEECSBTTTEECHH
T ss_pred CEEEEcCCCcCCCCHH
Confidence 4789999999998753
No 228
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=54.00 E-value=4.5 Score=37.03 Aligned_cols=46 Identities=13% Similarity=0.084 Sum_probs=26.6
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRW 449 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~W 449 (484)
.|....+...++.+|.. +.- -++..+. ..=+..|...|+..|...|
T Consensus 165 Kp~p~~~~~~~~~l~~~------~~~-~~~vGDs-~~Di~~a~~aG~~~v~v~~ 210 (240)
T 2hi0_A 165 KPAPDMTSECVKVLGVP------RDK-CVYIGDS-EIDIQTARNSEMDEIAVNW 210 (240)
T ss_dssp TTSSHHHHHHHHHHTCC------GGG-EEEEESS-HHHHHHHHHTTCEEEEESS
T ss_pred CCCHHHHHHHHHHcCCC------HHH-eEEEcCC-HHHHHHHHHCCCeEEEECC
Confidence 56667788888888743 111 2233333 3455667777887654444
No 229
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=53.82 E-value=4.3 Score=36.64 Aligned_cols=17 Identities=41% Similarity=0.567 Sum_probs=14.0
Q ss_pred ccEEEEcCCCceeeecc
Q 041302 163 KLYLILDLDHTLLNSTL 179 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~ 179 (484)
...+++|||+||+.+..
T Consensus 4 ~k~viFDlDGTL~d~~~ 20 (232)
T 3fvv_A 4 RRLALFDLDHTLLPLDS 20 (232)
T ss_dssp CEEEEECCBTTTBSSCH
T ss_pred CcEEEEeCCCCCcCCch
Confidence 35789999999998753
No 230
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=53.75 E-value=4.2 Score=36.38 Aligned_cols=46 Identities=7% Similarity=-0.041 Sum_probs=25.9
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCC-hHHHHHHhcCCeeeChh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDART-EKSRWAAKEAKFLVDPR 448 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T-~K~~~A~~~gi~IV~~~ 448 (484)
.|....+..+++.+|. +++ ..+|+...+. .-+..|...|+..|...
T Consensus 158 kp~~~~~~~~~~~~g~-----~~~--~~~i~vGD~~~~Di~~a~~aG~~~i~~~ 204 (238)
T 3ed5_A 158 KPMKEYFNYVFERIPQ-----FSA--EHTLIIGDSLTADIKGGQLAGLDTCWMN 204 (238)
T ss_dssp TTCHHHHHHHHHTSTT-----CCG--GGEEEEESCTTTTHHHHHHTTCEEEEEC
T ss_pred CCChHHHHHHHHHcCC-----CCh--hHeEEECCCcHHHHHHHHHCCCEEEEEC
Confidence 5666777788888872 111 1233332332 45666777787766443
No 231
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=53.72 E-value=4.4 Score=35.38 Aligned_cols=16 Identities=25% Similarity=0.453 Sum_probs=13.2
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+.+..
T Consensus 2 k~i~fDlDGTL~~~~~ 17 (216)
T 2pib_A 2 EAVIFDMDGVLMDTEP 17 (216)
T ss_dssp CEEEEESBTTTBCCGG
T ss_pred cEEEECCCCCCCCchH
Confidence 3689999999998754
No 232
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=53.63 E-value=4.6 Score=35.97 Aligned_cols=46 Identities=7% Similarity=-0.198 Sum_probs=25.7
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRW 449 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~W 449 (484)
.|....+..+++.+|.. +.-+ |+...+..-+..|...|+.+|...|
T Consensus 152 kp~~~~~~~~~~~~~~~------~~~~--~~iGD~~~Di~~a~~aG~~~~~~~~ 197 (230)
T 3um9_A 152 KPHQKVYELAMDTLHLG------ESEI--LFVSCNSWDATGAKYFGYPVCWINR 197 (230)
T ss_dssp TTCHHHHHHHHHHHTCC------GGGE--EEEESCHHHHHHHHHHTCCEEEECT
T ss_pred CCChHHHHHHHHHhCCC------cccE--EEEeCCHHHHHHHHHCCCEEEEEeC
Confidence 56667777888888742 2222 2222233445556667777665444
No 233
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=53.47 E-value=4.7 Score=36.40 Aligned_cols=18 Identities=22% Similarity=0.338 Sum_probs=14.8
Q ss_pred CccEEEEcCCCceeeecc
Q 041302 162 RKLYLILDLDHTLLNSTL 179 (484)
Q Consensus 162 rKL~LVLDLDeTLIhs~~ 179 (484)
+...+++||||||+++..
T Consensus 22 ~~k~i~fDlDGTL~d~~~ 39 (247)
T 3dv9_A 22 DLKAVLFDMDGVLFDSMP 39 (247)
T ss_dssp CCCEEEEESBTTTBCCHH
T ss_pred CCCEEEECCCCccCcCHH
Confidence 346899999999998754
No 234
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=53.45 E-value=3.9 Score=36.41 Aligned_cols=16 Identities=25% Similarity=0.366 Sum_probs=13.4
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+.+..
T Consensus 5 k~i~fDlDGTL~d~~~ 20 (235)
T 2om6_A 5 KLVTFDVWNTLLDLNI 20 (235)
T ss_dssp CEEEECCBTTTBCHHH
T ss_pred eEEEEeCCCCCCCcch
Confidence 4789999999998653
No 235
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=53.12 E-value=4.2 Score=36.53 Aligned_cols=47 Identities=13% Similarity=0.098 Sum_probs=23.9
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhhH
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRWI 450 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~WL 450 (484)
.|....+..+++.+|.. + ..+|+...+..=+..|...|+.+|...|-
T Consensus 146 Kp~~~~~~~~~~~lgi~------~--~~~i~vGDs~~Di~~a~~aG~~~~~~~~~ 192 (233)
T 3nas_A 146 KPDPDIFLTAAAMLDVS------P--ADCAAIEDAEAGISAIKSAGMFAVGVGQG 192 (233)
T ss_dssp ---CCHHHHHHHHHTSC------G--GGEEEEECSHHHHHHHHHTTCEEEECC--
T ss_pred CCChHHHHHHHHHcCCC------H--HHEEEEeCCHHHHHHHHHcCCEEEEECCc
Confidence 34455677777777743 1 12233323334556667778877766553
No 236
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=53.12 E-value=5.4 Score=35.96 Aligned_cols=16 Identities=19% Similarity=0.289 Sum_probs=13.9
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++|||+||+.+..
T Consensus 4 k~viFDlDGTL~d~~~ 19 (220)
T 2zg6_A 4 KAVLVDFGNTLVGFKP 19 (220)
T ss_dssp CEEEECSBTTTEEEEE
T ss_pred eEEEEcCCCceecccc
Confidence 4799999999998864
No 237
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=52.54 E-value=4.5 Score=36.06 Aligned_cols=15 Identities=27% Similarity=0.545 Sum_probs=12.6
Q ss_pred EEEEcCCCceeeecc
Q 041302 165 YLILDLDHTLLNSTL 179 (484)
Q Consensus 165 ~LVLDLDeTLIhs~~ 179 (484)
.+++||||||+.+..
T Consensus 3 AViFD~DGTL~ds~~ 17 (216)
T 3kbb_A 3 AVIFDMDGVLMDTEP 17 (216)
T ss_dssp EEEEESBTTTBCCGG
T ss_pred EEEECCCCcccCCHH
Confidence 588999999998653
No 238
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=51.98 E-value=4.6 Score=37.50 Aligned_cols=43 Identities=16% Similarity=0.130 Sum_probs=26.9
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeC
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVD 446 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~ 446 (484)
+|....+...++.+|.. +.-+ |+..+. ..-+..|++.|++.|.
T Consensus 170 KP~p~~~~~a~~~lg~~------p~e~-l~VGDs-~~Di~aA~~aG~~~i~ 212 (250)
T 4gib_A 170 KPHPEIFLMSAKGLNVN------PQNC-IGIEDA-SAGIDAINSANMFSVG 212 (250)
T ss_dssp TTSSHHHHHHHHHHTCC------GGGE-EEEESS-HHHHHHHHHTTCEEEE
T ss_pred CCcHHHHHHHHHHhCCC------hHHe-EEECCC-HHHHHHHHHcCCEEEE
Confidence 67777888888888743 2222 233333 3456677888988773
No 239
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=51.34 E-value=4.8 Score=35.96 Aligned_cols=16 Identities=31% Similarity=0.474 Sum_probs=13.6
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+++..
T Consensus 3 k~i~fDlDGTL~~~~~ 18 (230)
T 3vay_A 3 KLVTFDLDDTLWDTAP 18 (230)
T ss_dssp CEEEECCBTTTBCSHH
T ss_pred eEEEecCcccCcCCch
Confidence 4789999999998763
No 240
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=51.26 E-value=5.2 Score=36.33 Aligned_cols=45 Identities=11% Similarity=-0.094 Sum_probs=26.3
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPR 448 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~ 448 (484)
.|....+..+++.+|... ..+|+...+..-+..|...|+.+|...
T Consensus 173 kp~~~~~~~~~~~lgi~~--------~~~~~iGD~~~Di~~a~~aG~~~~~~~ 217 (254)
T 3umc_A 173 KPDPQVYLGACRLLDLPP--------QEVMLCAAHNYDLKAARALGLKTAFIA 217 (254)
T ss_dssp TTSHHHHHHHHHHHTCCG--------GGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred CCCHHHHHHHHHHcCCCh--------HHEEEEcCchHhHHHHHHCCCeEEEEe
Confidence 566677888888887431 122333333445556666787766544
No 241
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=51.05 E-value=4.5 Score=36.82 Aligned_cols=16 Identities=31% Similarity=0.580 Sum_probs=13.6
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+.+..
T Consensus 3 k~iiFDlDGTL~d~~~ 18 (241)
T 2hoq_A 3 KVIFFDLDDTLVDTSK 18 (241)
T ss_dssp CEEEECSBTTTBCHHH
T ss_pred cEEEEcCCCCCCCChh
Confidence 3789999999998764
No 242
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=50.87 E-value=5.9 Score=35.44 Aligned_cols=16 Identities=19% Similarity=0.158 Sum_probs=13.5
Q ss_pred ccEEEEcCCCceeeec
Q 041302 163 KLYLILDLDHTLLNST 178 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~ 178 (484)
...+++|+||||+.+.
T Consensus 4 ~k~i~FDlDGTL~d~~ 19 (233)
T 3umb_A 4 IRAVVFDAYGTLFDVY 19 (233)
T ss_dssp CCEEEECSBTTTEETH
T ss_pred ceEEEEeCCCcccccH
Confidence 4579999999999864
No 243
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=50.78 E-value=4.6 Score=36.00 Aligned_cols=17 Identities=24% Similarity=0.073 Sum_probs=14.0
Q ss_pred ccEEEEcCCCceeeecc
Q 041302 163 KLYLILDLDHTLLNSTL 179 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~ 179 (484)
...+++|||+||+++..
T Consensus 6 ~k~i~fD~DGTL~d~~~ 22 (240)
T 3smv_A 6 FKALTFDCYGTLIDWET 22 (240)
T ss_dssp CSEEEECCBTTTBCHHH
T ss_pred ceEEEEeCCCcCcCCch
Confidence 35789999999998753
No 244
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=50.58 E-value=5.3 Score=36.27 Aligned_cols=16 Identities=25% Similarity=0.164 Sum_probs=13.5
Q ss_pred ccEEEEcCCCceeeec
Q 041302 163 KLYLILDLDHTLLNST 178 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~ 178 (484)
...+++||||||+.+.
T Consensus 14 ~k~viFDlDGTL~d~~ 29 (240)
T 2no4_A 14 LRACVFDAYGTLLDVH 29 (240)
T ss_dssp CCEEEECCBTTTBCTT
T ss_pred ccEEEEeCCCcccccH
Confidence 4589999999999765
No 245
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=50.51 E-value=5.1 Score=36.92 Aligned_cols=16 Identities=13% Similarity=0.019 Sum_probs=13.5
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+++..
T Consensus 7 k~i~fDlDGTLld~~~ 22 (267)
T 1swv_A 7 EAVIFAWAGTTVDYGC 22 (267)
T ss_dssp CEEEECSBTTTBSTTC
T ss_pred eEEEEecCCCEEeCCC
Confidence 5789999999998653
No 246
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=50.45 E-value=6.1 Score=35.75 Aligned_cols=17 Identities=29% Similarity=0.356 Sum_probs=14.2
Q ss_pred ccEEEEcCCCceeeecc
Q 041302 163 KLYLILDLDHTLLNSTL 179 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~ 179 (484)
...+++||||||+.+..
T Consensus 29 ik~iifDlDGTL~d~~~ 45 (240)
T 3sd7_A 29 YEIVLFDLDGTLTDPKE 45 (240)
T ss_dssp CSEEEECSBTTTEECHH
T ss_pred ccEEEEecCCcCccCHH
Confidence 36899999999998753
No 247
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=50.40 E-value=5.1 Score=36.59 Aligned_cols=48 Identities=8% Similarity=0.002 Sum_probs=27.1
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRW 449 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~W 449 (484)
.|....+..+++.+|... ....+|+...+..-+..|...|+.+|...|
T Consensus 171 Kp~~~~~~~~~~~lgi~~------~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~ 218 (250)
T 3l5k_A 171 KPDPDIFLACAKRFSPPP------AMEKCLVFEDAPNGVEAALAAGMQVVMVPD 218 (250)
T ss_dssp TTSTHHHHHHHHTSSSCC------CGGGEEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred CCChHHHHHHHHHcCCCC------CcceEEEEeCCHHHHHHHHHcCCEEEEEcC
Confidence 556667778888887532 112233333333555666777876665444
No 248
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=50.25 E-value=5.5 Score=37.47 Aligned_cols=16 Identities=25% Similarity=0.281 Sum_probs=13.8
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+++..
T Consensus 36 k~iifDlDGTLlds~~ 51 (275)
T 2qlt_A 36 NAALFDVDGTIIISQP 51 (275)
T ss_dssp SEEEECCBTTTEECHH
T ss_pred CEEEECCCCCCCCCHH
Confidence 5789999999998864
No 249
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=50.11 E-value=4.9 Score=36.15 Aligned_cols=16 Identities=19% Similarity=0.223 Sum_probs=13.4
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++||||||+.+..
T Consensus 15 k~viFD~DGTLvd~~~ 30 (225)
T 1nnl_A 15 DAVCFDVDSTVIREEG 30 (225)
T ss_dssp SEEEEETBTTTBSSCH
T ss_pred CEEEEeCccccccccc
Confidence 4789999999998753
No 250
>3t7k_A RTT107, regulator of TY1 transposition protein 107; BRCT, DNA repair, phospho-peptide, protein binding; HET: SEP; 2.03A {Saccharomyces cerevisiae} PDB: 3t7j_A* 3t7i_A
Probab=50.07 E-value=34 Score=33.08 Aligned_cols=82 Identities=11% Similarity=0.089 Sum_probs=52.6
Q ss_pred hhhhcccccceeee---eeeccCCCCCcchHHHHHHHHHhCCeEeee-----cCC---------------CccEEEEcCC
Q 041302 373 KMVRGEVLKGCKLV---FSHVFPTKFPADTHYLWKMAEQLGATCSIE-----LDP---------------SVTHVVSTDA 429 (484)
Q Consensus 373 ~~lr~~vL~G~~Iv---fSG~~p~~~~~~~~~l~~la~~lGA~v~~~-----i~~---------------~vTHlVa~~~ 429 (484)
...+.++|.|..|+ ++--+|.|. ..+..+++.+||.=... ++. ...+++.+..
T Consensus 129 ~~~~gkLf~~~~I~ciNls~dI~GG~----e~issIleahG~~~~~~l~~~~~~~~dl~~n~~~~~~~~~~~~~ILia~K 204 (256)
T 3t7k_A 129 TKLPTKVFERANIRCINLVNDIPGGV----DTIGSVLKAHGIEKINVLRSKKCTFEDIIPNDVSKQENGGIFKYVLIVTK 204 (256)
T ss_dssp TTSSSCHHHHTTCCEEEEETTCTTCH----HHHHHHHHHTTCCEEEEECTTTCCGGGCCCCC--------CCSEEEECSC
T ss_pred hccccccccCCcceeeeeccCCCCCH----HHHHHHHHHcCCceeeecccccccHHHhhhccccccccCCCCCEEEEEcc
Confidence 45678999999554 477777763 57899999999963322 221 2335555543
Q ss_pred CCh--HHHHHHh-----cCCeeeChhhHHHHHHhcC
Q 041302 430 RTE--KSRWAAK-----EAKFLVDPRWIETANFLWQ 458 (484)
Q Consensus 430 ~T~--K~~~A~~-----~gi~IV~~~WL~~c~~~w~ 458 (484)
.++ ++....+ ..+-+|..+|...|+..-+
T Consensus 205 ~~q~k~Fkk~~~~~~~n~~~lvveWdWCVksIF~le 240 (256)
T 3t7k_A 205 ASQVKKFTKLINDRDKNETILIVEWNWCVESIFHLN 240 (256)
T ss_dssp HHHHHHHHHHHHHHSTTSCEEEECHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhhcccccceEEEEEcHHHHHHHhhee
Confidence 221 3333332 2468999999999998544
No 251
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=49.89 E-value=9.6 Score=36.58 Aligned_cols=41 Identities=12% Similarity=0.152 Sum_probs=36.7
Q ss_pred EEEecccHHHHHHHhhh-CCeEEEecCCcHhHHHHHHhhhCC
Q 041302 214 MTKLRPFVHTFLKEASE-MFEMYIYTMGDRPYALEMAKLLDP 254 (484)
Q Consensus 214 ~vklRPgl~eFL~~ls~-~yEl~IyT~g~r~YA~~I~~~LDP 254 (484)
-+.+|||+.+|++.+.+ .+.++|.|.|...+|.+|++.+..
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~ 180 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGV 180 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTC
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCC
Confidence 47899999999999976 589999999999999999997753
No 252
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=49.81 E-value=5.4 Score=36.65 Aligned_cols=16 Identities=31% Similarity=0.208 Sum_probs=13.6
Q ss_pred ccEEEEcCCCceeeec
Q 041302 163 KLYLILDLDHTLLNST 178 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~ 178 (484)
...+++||||||+++.
T Consensus 14 ~k~i~fDlDGTL~d~~ 29 (277)
T 3iru_A 14 VEALILDWAGTTIDFG 29 (277)
T ss_dssp CCEEEEESBTTTBSTT
T ss_pred CcEEEEcCCCCcccCC
Confidence 4589999999999864
No 253
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=49.59 E-value=4.9 Score=36.24 Aligned_cols=45 Identities=16% Similarity=0.007 Sum_probs=26.4
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPR 448 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~ 448 (484)
.|....+..+++.+|..- ..+|+...+..-+..|...|+.++...
T Consensus 169 kp~~~~~~~~~~~lgi~~--------~~~~~iGD~~~Di~~a~~aG~~~~~~~ 213 (254)
T 3umg_A 169 KPDPQAYLRTAQVLGLHP--------GEVMLAAAHNGDLEAAHATGLATAFIL 213 (254)
T ss_dssp TTSHHHHHHHHHHTTCCG--------GGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred CCCHHHHHHHHHHcCCCh--------HHEEEEeCChHhHHHHHHCCCEEEEEe
Confidence 566677888888887531 223333233345556667787766544
No 254
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=49.52 E-value=6.3 Score=36.18 Aligned_cols=18 Identities=28% Similarity=0.235 Sum_probs=14.8
Q ss_pred CccEEEEcCCCceeeecc
Q 041302 162 RKLYLILDLDHTLLNSTL 179 (484)
Q Consensus 162 rKL~LVLDLDeTLIhs~~ 179 (484)
....+++||||||+.+..
T Consensus 27 ~ik~i~fDlDGTL~d~~~ 44 (259)
T 4eek_A 27 PFDAVLFDLDGVLVESEG 44 (259)
T ss_dssp CCSEEEEESBTTTEECHH
T ss_pred CCCEEEECCCCCcccCHH
Confidence 456899999999998753
No 255
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=49.45 E-value=5.1 Score=35.81 Aligned_cols=15 Identities=20% Similarity=0.022 Sum_probs=13.1
Q ss_pred cEEEEcCCCceeeec
Q 041302 164 LYLILDLDHTLLNST 178 (484)
Q Consensus 164 L~LVLDLDeTLIhs~ 178 (484)
..+++||||||+.+.
T Consensus 3 k~i~fDlDGTL~d~~ 17 (234)
T 3u26_A 3 RAVFFDSLGTLNSVE 17 (234)
T ss_dssp CEEEECSTTTTBCHH
T ss_pred cEEEEcCCCcccccc
Confidence 478999999999876
No 256
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=49.15 E-value=6.2 Score=35.88 Aligned_cols=17 Identities=29% Similarity=0.395 Sum_probs=14.1
Q ss_pred ccEEEEcCCCceeeecc
Q 041302 163 KLYLILDLDHTLLNSTL 179 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~ 179 (484)
...+++|||+||+.+..
T Consensus 24 ~k~i~fDlDGTL~d~~~ 40 (243)
T 3qxg_A 24 LKAVLFDMDGVLFNSMP 40 (243)
T ss_dssp CCEEEECSBTTTBCCHH
T ss_pred CCEEEEcCCCCCCCCHH
Confidence 45899999999998753
No 257
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=49.06 E-value=5.2 Score=38.45 Aligned_cols=17 Identities=35% Similarity=0.331 Sum_probs=14.4
Q ss_pred ccEEEEcCCCceeeecc
Q 041302 163 KLYLILDLDHTLLNSTL 179 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~ 179 (484)
...+++||||||+.+..
T Consensus 37 iKli~fDlDGTLld~~~ 53 (304)
T 3l7y_A 37 VKVIATDMDGTFLNSKG 53 (304)
T ss_dssp CSEEEECCCCCCSCTTS
T ss_pred eEEEEEeCCCCCCCCCC
Confidence 46799999999998764
No 258
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=48.96 E-value=5.6 Score=35.53 Aligned_cols=17 Identities=29% Similarity=0.315 Sum_probs=14.1
Q ss_pred ccEEEEcCCCceeeecc
Q 041302 163 KLYLILDLDHTLLNSTL 179 (484)
Q Consensus 163 KL~LVLDLDeTLIhs~~ 179 (484)
...+++|||+||+.+..
T Consensus 5 ~k~i~fDlDGTL~d~~~ 21 (240)
T 3qnm_A 5 YKNLFFDLDDTIWAFSR 21 (240)
T ss_dssp CSEEEECCBTTTBCHHH
T ss_pred ceEEEEcCCCCCcCchh
Confidence 45799999999997753
No 259
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=48.86 E-value=5.6 Score=37.34 Aligned_cols=47 Identities=13% Similarity=0.092 Sum_probs=27.5
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCC-eeeChhh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAK-FLVDPRW 449 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi-~IV~~~W 449 (484)
+|....+...++.+|.. +. .-++..+....-+..|.+.|+ ..|...|
T Consensus 176 KP~p~~~~~~~~~~~~~------~~-~~~~vGDs~~~Di~~A~~aG~~~~i~v~~ 223 (260)
T 2gfh_A 176 KPAPSIFYHCCDLLGVQ------PG-DCVMVGDTLETDIQGGLNAGLKATVWINK 223 (260)
T ss_dssp TTCHHHHHHHHHHHTCC------GG-GEEEEESCTTTHHHHHHHTTCSEEEEECT
T ss_pred CCCHHHHHHHHHHcCCC------hh-hEEEECCCchhhHHHHHHCCCceEEEEcC
Confidence 56667777888888743 11 123334423455667778888 5554433
No 260
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=48.34 E-value=6.3 Score=35.63 Aligned_cols=16 Identities=38% Similarity=0.594 Sum_probs=13.5
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++|||+||+.+..
T Consensus 4 k~viFDlDGTL~d~~~ 19 (222)
T 2nyv_A 4 RVILFDLDGTLIDSAK 19 (222)
T ss_dssp CEEEECTBTTTEECHH
T ss_pred CEEEECCCCcCCCCHH
Confidence 3789999999998764
No 261
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=48.12 E-value=6 Score=37.07 Aligned_cols=17 Identities=24% Similarity=0.421 Sum_probs=14.4
Q ss_pred CccEEEEcCCCceeeec
Q 041302 162 RKLYLILDLDHTLLNST 178 (484)
Q Consensus 162 rKL~LVLDLDeTLIhs~ 178 (484)
....+++|||+||+.+.
T Consensus 56 ~~k~i~FDlDGTL~d~~ 72 (282)
T 3nuq_A 56 NLKVFFFDIDNCLYKSS 72 (282)
T ss_dssp CCCEEEECCTTTTSCCC
T ss_pred CCCEEEEecCCCcccCC
Confidence 45789999999999875
No 262
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=47.22 E-value=6.1 Score=36.82 Aligned_cols=15 Identities=47% Similarity=0.532 Sum_probs=12.9
Q ss_pred ccEEEEcCCCceeee
Q 041302 163 KLYLILDLDHTLLNS 177 (484)
Q Consensus 163 KL~LVLDLDeTLIhs 177 (484)
...+++||||||++.
T Consensus 12 iKli~~DlDGTLl~~ 26 (268)
T 3r4c_A 12 IKVLLLDVDGTLLSF 26 (268)
T ss_dssp CCEEEECSBTTTBCT
T ss_pred eEEEEEeCCCCCcCC
Confidence 467999999999984
No 263
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=46.20 E-value=7.5 Score=35.10 Aligned_cols=46 Identities=13% Similarity=0.125 Sum_probs=28.5
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRW 449 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~W 449 (484)
+|....+..+++.+|.. +.- +|+...+..-+..|.+.|+.+|...|
T Consensus 173 KP~~~~~~~~~~~~g~~------~~~--~~~vGD~~~Di~~a~~aG~~~i~v~~ 218 (229)
T 4dcc_A 173 KPEPEIFKAVTEDAGID------PKE--TFFIDDSEINCKVAQELGISTYTPKA 218 (229)
T ss_dssp TTCHHHHHHHHHHHTCC------GGG--EEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred CCCHHHHHHHHHHcCCC------HHH--eEEECCCHHHHHHHHHcCCEEEEECC
Confidence 56677888888888743 111 22323333556777788988776554
No 264
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=45.06 E-value=6.6 Score=36.13 Aligned_cols=46 Identities=15% Similarity=0.014 Sum_probs=25.4
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRW 449 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~W 449 (484)
.|....+..+++.+|.. +.-+-+| . .+..-+..|...|+.+|...|
T Consensus 147 Kp~~~~~~~~~~~~~~~------~~~~~~v-G-D~~~Di~~a~~aG~~~~~~~~ 192 (253)
T 1qq5_A 147 KPHPDSYALVEEVLGVT------PAEVLFV-S-SNGFDVGGAKNFGFSVARVAR 192 (253)
T ss_dssp TTSHHHHHHHHHHHCCC------GGGEEEE-E-SCHHHHHHHHHHTCEEEEECC
T ss_pred CCCHHHHHHHHHHcCCC------HHHEEEE-e-CChhhHHHHHHCCCEEEEECC
Confidence 45666777777777732 2222222 2 223345566667877766665
No 265
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=44.70 E-value=7.1 Score=36.09 Aligned_cols=46 Identities=13% Similarity=0.047 Sum_probs=27.1
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRW 449 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~W 449 (484)
+|....+...++.+|.. +.-+ |+..+ ...-++.|++.|++.|...|
T Consensus 149 KP~p~~~~~a~~~lg~~------p~e~-l~VgD-s~~di~aA~~aG~~~I~V~~ 194 (243)
T 4g9b_A 149 KPDPEIFLAACAGLGVP------PQAC-IGIED-AQAGIDAINASGMRSVGIGA 194 (243)
T ss_dssp TTSTHHHHHHHHHHTSC------GGGE-EEEES-SHHHHHHHHHHTCEEEEEST
T ss_pred CCcHHHHHHHHHHcCCC------hHHE-EEEcC-CHHHHHHHHHcCCEEEEECC
Confidence 66777778888888753 2212 22233 23456677777877665444
No 266
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=44.36 E-value=7.7 Score=38.00 Aligned_cols=22 Identities=9% Similarity=0.126 Sum_probs=0.0
Q ss_pred hhhhhcCccEEEEcCCCceeee
Q 041302 156 KHLLRHRKLYLILDLDHTLLNS 177 (484)
Q Consensus 156 ~~ll~~rKL~LVLDLDeTLIhs 177 (484)
+.........+++|||+||+.+
T Consensus 14 ~~~~~~~~kli~fDlDGTLld~ 35 (332)
T 1y8a_A 14 RENLYFQGHMFFTDWEGPWILT 35 (332)
T ss_dssp ------CCCEEEECSBTTTBCC
T ss_pred hhhhCCCceEEEEECcCCCcCc
No 267
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=42.93 E-value=8.9 Score=35.68 Aligned_cols=16 Identities=31% Similarity=0.304 Sum_probs=13.6
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
..+++|||+||+++..
T Consensus 2 k~iiFDlDGTL~d~~~ 17 (263)
T 3k1z_A 2 RLLTWDVKDTLLRLRH 17 (263)
T ss_dssp CEEEECCBTTTEEESS
T ss_pred cEEEEcCCCceeCCCC
Confidence 3689999999999764
No 268
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=41.85 E-value=8.9 Score=35.10 Aligned_cols=15 Identities=33% Similarity=0.534 Sum_probs=12.9
Q ss_pred ccEEEEcCCCceeee
Q 041302 163 KLYLILDLDHTLLNS 177 (484)
Q Consensus 163 KL~LVLDLDeTLIhs 177 (484)
+..+++|+|+||+.+
T Consensus 6 ~k~viFD~DGTL~d~ 20 (236)
T 2fea_A 6 KPFIICDFDGTITMN 20 (236)
T ss_dssp CEEEEECCTTTTBSS
T ss_pred CcEEEEeCCCCCCcc
Confidence 458999999999966
No 269
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=38.02 E-value=10 Score=33.43 Aligned_cols=13 Identities=31% Similarity=0.337 Sum_probs=11.7
Q ss_pred cEEEEcCCCceee
Q 041302 164 LYLILDLDHTLLN 176 (484)
Q Consensus 164 L~LVLDLDeTLIh 176 (484)
..+++||||||+.
T Consensus 3 k~viFD~DGTL~d 15 (206)
T 1rku_A 3 EIACLDLEGVLVP 15 (206)
T ss_dssp EEEEEESBTTTBC
T ss_pred cEEEEccCCcchh
Confidence 3689999999998
No 270
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=36.00 E-value=11 Score=35.66 Aligned_cols=47 Identities=15% Similarity=0.185 Sum_probs=29.6
Q ss_pred CCcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhh
Q 041302 395 FPADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRW 449 (484)
Q Consensus 395 ~~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~W 449 (484)
.+|....+...++.+|.. +. .-|+..+. ..-+..|.+.|++.|...|
T Consensus 186 ~KP~p~~~~~~~~~lg~~------p~-~~l~VgDs-~~di~aA~~aG~~~i~v~~ 232 (261)
T 1yns_A 186 HKVESESYRKIADSIGCS------TN-NILFLTDV-TREASAAEEADVHVAVVVR 232 (261)
T ss_dssp CTTCHHHHHHHHHHHTSC------GG-GEEEEESC-HHHHHHHHHTTCEEEEECC
T ss_pred CCCCHHHHHHHHHHhCcC------cc-cEEEEcCC-HHHHHHHHHCCCEEEEEeC
Confidence 467777888888888753 11 12333343 5566778888987665444
No 271
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=35.86 E-value=11 Score=35.74 Aligned_cols=46 Identities=15% Similarity=0.010 Sum_probs=30.0
Q ss_pred CcchHHHHHHHHHhCCeEeeecCCCccEEEEcCCCChHHHHHHhcCCeeeChhh
Q 041302 396 PADTHYLWKMAEQLGATCSIELDPSVTHVVSTDARTEKSRWAAKEAKFLVDPRW 449 (484)
Q Consensus 396 ~~~~~~l~~la~~lGA~v~~~i~~~vTHlVa~~~~T~K~~~A~~~gi~IV~~~W 449 (484)
+|....+...++.+|..- .- -|+..+. ..-+..|++.|++.|...|
T Consensus 187 KP~p~~~~~a~~~lg~~p------~~-~l~vgDs-~~di~aA~~aG~~~i~v~~ 232 (253)
T 2g80_A 187 KTETQSYANILRDIGAKA------SE-VLFLSDN-PLELDAAAGVGIATGLASR 232 (253)
T ss_dssp TTCHHHHHHHHHHHTCCG------GG-EEEEESC-HHHHHHHHTTTCEEEEECC
T ss_pred CCCHHHHHHHHHHcCCCc------cc-EEEEcCC-HHHHHHHHHcCCEEEEEcC
Confidence 677777788888888642 21 2333333 3457778888998777655
No 272
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=32.05 E-value=39 Score=36.29 Aligned_cols=43 Identities=16% Similarity=0.204 Sum_probs=37.9
Q ss_pred eeEEEEecccHHHHHHHhhhCCeEEEecCCcHhHHHHHHhhh-C
Q 041302 211 MNMMTKLRPFVHTFLKEASEMFEMYIYTMGDRPYALEMAKLL-D 253 (484)
Q Consensus 211 ~~~~vklRPgl~eFL~~ls~~yEl~IyT~g~r~YA~~I~~~L-D 253 (484)
...||..-|.+..+|++|.+.=.+.|-||+...|++.+++.| +
T Consensus 241 pekYv~kdp~l~~~L~~Lr~~GKlfLiTNS~~~yv~~~m~yllg 284 (555)
T 2jc9_A 241 LEKYVVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFD 284 (555)
T ss_dssp HHHHBCCCTHHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHTC
T ss_pred HHHhcCCChHHHHHHHHHHHcCCEEEEeCCChHHHHHHHHHhcC
Confidence 457888999999999999644389999999999999999987 5
No 273
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=29.30 E-value=43 Score=33.25 Aligned_cols=51 Identities=8% Similarity=0.139 Sum_probs=42.3
Q ss_pred EecccHHHHHHHhh-hCCeEEEecCCcHhHHHHHHhh------hCCCCcccceeEEeec
Q 041302 216 KLRPFVHTFLKEAS-EMFEMYIYTMGDRPYALEMAKL------LDPSREYFNARVISRD 267 (484)
Q Consensus 216 klRPgl~eFL~~ls-~~yEl~IyT~g~r~YA~~I~~~------LDP~~~~F~~RI~sRd 267 (484)
++.|+..+.++.+. .-|+++|.|++.+.++..++.. |.|++ .++.|+..+.
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~-ViG~~~~~~~ 200 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPEN-VIGVTTLLKN 200 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGG-EEEECEEEEC
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHH-eEeeeeeeec
Confidence 68999999999996 5699999999999999999975 45665 6777766443
No 274
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=28.88 E-value=43 Score=27.23 Aligned_cols=42 Identities=12% Similarity=0.201 Sum_probs=35.9
Q ss_pred cccHHHHHHHhhhCCeEEEecCC-----cHhHHHHHHhhhCCCCccc
Q 041302 218 RPFVHTFLKEASEMFEMYIYTMG-----DRPYALEMAKLLDPSREYF 259 (484)
Q Consensus 218 RPgl~eFL~~ls~~yEl~IyT~g-----~r~YA~~I~~~LDP~~~~F 259 (484)
=|-+.++++.+-+...|+|||.+ .=.|...+.++|+-.|.-|
T Consensus 4 s~~~~~~v~~~i~~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~ 50 (109)
T 3ipz_A 4 TPQLKDTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPF 50 (109)
T ss_dssp CHHHHHHHHHHHTSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHccCCEEEEEecCCCCCCChhHHHHHHHHHHcCCCc
Confidence 36788999999999999999998 5788999999998877544
No 275
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=28.72 E-value=19 Score=34.22 Aligned_cols=16 Identities=25% Similarity=0.204 Sum_probs=13.9
Q ss_pred cEEEEcCCCceeeecc
Q 041302 164 LYLILDLDHTLLNSTL 179 (484)
Q Consensus 164 L~LVLDLDeTLIhs~~ 179 (484)
.++++|+||||+.+..
T Consensus 33 ~~viFD~dGTL~ds~~ 48 (287)
T 3a1c_A 33 TAVIFDKTGTLTKGKP 48 (287)
T ss_dssp CEEEEECCCCCBCSCC
T ss_pred CEEEEeCCCCCcCCCE
Confidence 4799999999999864
Done!