BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041306
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54967|BIOB_ARATH Biotin synthase OS=Arabidopsis thaliana GN=BIO2 PE=2 SV=1
Length = 378
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/147 (63%), Positives = 105/147 (71%), Gaps = 33/147 (22%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GIIGLGEAEEDR+GLLHTLATLP+HPESVPINALLAVKGTPL+DQKPVEIWEMIRMI TA
Sbjct: 234 GIIGLGEAEEDRIGLLHTLATLPSHPESVPINALLAVKGTPLEDQKPVEIWEMIRMIGTA 293
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RIVMPKAM KLLTTPNN+F ADQLMFK LGL
Sbjct: 294 RIVMPKAMVRLSAGRVRFSMSEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKTLGL 353
Query: 91 TPKAPSFHEDEANVSKAESYQEAISSS 117
PK PSF ED+ S++E+ ++ S+S
Sbjct: 354 IPKPPSFSEDD---SESENCEKVASAS 377
>sp|Q11S94|BIOB_CYTH3 Biotin synthase OS=Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469) GN=bioB PE=3 SV=1
Length = 337
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 81/132 (61%), Gaps = 31/132 (23%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GIIG+GE+ DRVG+LHTLA + HPESVP+NAL+ V+GTPL+DQ V +WEM+RMIATA
Sbjct: 193 GIIGMGESHGDRVGMLHTLANMVEHPESVPVNALVPVEGTPLEDQPRVSVWEMVRMIATA 252
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MPKAM KLLTTPN AD+ MF+VL L
Sbjct: 253 RIIMPKAMVRLSAGRVRMNTEEQALCFLAGANSIFAGDKLLTTPNPEVNADKEMFQVLNL 312
Query: 91 TPKAPSFHEDEA 102
P+ SF +A
Sbjct: 313 KPRQ-SFKNGDA 323
>sp|A6GW77|BIOB_FLAPJ Biotin synthase OS=Flavobacterium psychrophilum (strain JIP02/86 /
ATCC 49511) GN=bioB PE=3 SV=1
Length = 362
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 78/125 (62%), Gaps = 30/125 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GIIG+GE+ DR G+L L+TL PESVPINAL+AV+GTP++++KPVEIWEMIRM+AT
Sbjct: 193 GIIGMGESIGDRAGMLVALSTLSPQPESVPINALVAVEGTPMEEEKPVEIWEMIRMVATT 252
Query: 61 RIVMP-----------------KAM-------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MP +AM KLLTTPN + D MF++LGL
Sbjct: 253 RIIMPETQVRLSAGRMNMTREGQAMCFFAGANSIFAGDKLLTTPNPDVNEDMKMFEMLGL 312
Query: 91 TPKAP 95
P+ P
Sbjct: 313 NPQKP 317
>sp|A5FLT1|BIOB_FLAJ1 Biotin synthase OS=Flavobacterium johnsoniae (strain ATCC 17061 /
DSM 2064 / UW101) GN=bioB PE=3 SV=1
Length = 363
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 77/125 (61%), Gaps = 30/125 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GIIG+GE+ EDR G+L L+TL PESVPINAL+AV+GTP++++KPVEIWEMIRM+AT
Sbjct: 194 GIIGMGESIEDRAGMLVALSTLNPQPESVPINALVAVEGTPMEEEKPVEIWEMIRMVATT 253
Query: 61 RIVMP-----------------KAM-------------KLLTTPNNNFVADQLMFKVLGL 90
RIVMP +AM KLLTTPN + D MF+ LG+
Sbjct: 254 RIVMPETQVRLSAGRTNMSREGQAMCFFAGANSIFAGDKLLTTPNPDVNEDMKMFETLGM 313
Query: 91 TPKAP 95
+ P
Sbjct: 314 VAQKP 318
>sp|A0M7A9|BIOB_GRAFK Biotin synthase OS=Gramella forsetii (strain KT0803) GN=bioB PE=3
SV=1
Length = 363
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 74/123 (60%), Gaps = 30/123 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GIIG+GE+E DR G+L L+TL PESVPINAL+ V+GTP+++Q+PV IWEMIRM+AT
Sbjct: 192 GIIGMGESEADRAGMLVALSTLNPQPESVPINALVPVEGTPMEEQEPVPIWEMIRMVATT 251
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RIVMP+ KLLTTPN + D MFK+LGL
Sbjct: 252 RIVMPETQVRLSAGRTQMSREGQAMCFFAGANSIFAGDKLLTTPNPDVSEDMEMFKMLGL 311
Query: 91 TPK 93
P+
Sbjct: 312 NPQ 314
>sp|Q9Z6L5|BIOB_CHLPN Biotin synthase OS=Chlamydia pneumoniae GN=bioB PE=3 SV=1
Length = 331
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 74/133 (55%), Gaps = 31/133 (23%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE+EEDR+ LLH LAT PESVP+N L + GTPLQDQ P+ WE++R IATA
Sbjct: 193 GIVGMGESEEDRIKLLHVLATRDHIPESVPVNLLWPIDGTPLQDQPPISFWEVLRTIATA 252
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
R+V P++M KLLT NN+ D M K+LGL
Sbjct: 253 RVVFPRSMVRLAAGRAFLTVEQQTLCFLAGANSIFYGDKLLTVENNDIDEDAEMIKLLGL 312
Query: 91 TPKAPSFHEDEAN 103
P+ PSF + N
Sbjct: 313 IPR-PSFGIERGN 324
>sp|B0VCA8|BIOB_ACIBY Biotin synthase OS=Acinetobacter baumannii (strain AYE) GN=bioB
PE=3 SV=2
Length = 329
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 71/125 (56%), Gaps = 30/125 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+GLGE+ EDR+GLLH LATLP HPESVPIN L+ ++GTPL D + +++ E IR IA A
Sbjct: 191 GIVGLGESREDRIGLLHELATLPIHPESVPINMLVPIEGTPLADVEKLDVIEWIRTIAVA 250
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MP + KLLTTPN DQ +F LGL
Sbjct: 251 RIIMPHSYIRLSAGRESLSDSDQALAFMAGANSLFSGDKLLTTPNAGEGKDQALFNKLGL 310
Query: 91 TPKAP 95
T + P
Sbjct: 311 TAEKP 315
>sp|A3M4U4|BIOB_ACIBT Biotin synthase OS=Acinetobacter baumannii (strain ATCC 17978 /
NCDC KC 755) GN=bioB PE=3 SV=2
Length = 329
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 71/125 (56%), Gaps = 30/125 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+GLGE+ EDR+GLLH LATLP HPESVPIN L+ ++GTPL D + +++ E IR IA A
Sbjct: 191 GIVGLGESREDRIGLLHELATLPIHPESVPINMLVPIEGTPLADVEKLDVIEWIRTIAVA 250
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MP + KLLTTPN DQ +F LGL
Sbjct: 251 RIIMPHSYIRLSAGRESLSDSDQALAFMAGANSLFSGDKLLTTPNAGEGKDQALFNKLGL 310
Query: 91 TPKAP 95
T + P
Sbjct: 311 TAEKP 315
>sp|B0VR41|BIOB_ACIBS Biotin synthase OS=Acinetobacter baumannii (strain SDF) GN=bioB
PE=3 SV=2
Length = 329
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 71/125 (56%), Gaps = 30/125 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+GLGE+ EDR+GLLH LATLP HPESVPIN L+ ++GTPL D + +++ E IR IA A
Sbjct: 191 GIVGLGESREDRIGLLHELATLPIHPESVPINMLVPIEGTPLADVEKLDVIEWIRTIAVA 250
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MP + KLLTTPN DQ +F LGL
Sbjct: 251 RIIMPHSYIRLSAGRESLSDSDQALAFMAGANSLFSGDKLLTTPNAGEGKDQALFNKLGL 310
Query: 91 TPKAP 95
T + P
Sbjct: 311 TAEKP 315
>sp|B2HYX9|BIOB_ACIBC Biotin synthase OS=Acinetobacter baumannii (strain ACICU) GN=bioB
PE=3 SV=1
Length = 329
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 71/125 (56%), Gaps = 30/125 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+GLGE+ EDR+GLLH LATLP HPESVPIN L+ ++GTPL D + +++ E IR IA A
Sbjct: 191 GIVGLGESREDRIGLLHELATLPIHPESVPINMLVPIEGTPLADVEKLDVIEWIRTIAVA 250
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MP + KLLTTPN DQ +F LGL
Sbjct: 251 RIIMPHSYIRLSAGRESLSDSDQALAFMAGANSLFSGDKLLTTPNAGEGKDQALFNKLGL 310
Query: 91 TPKAP 95
T + P
Sbjct: 311 TAEKP 315
>sp|B7I4I4|BIOB_ACIB5 Biotin synthase OS=Acinetobacter baumannii (strain AB0057) GN=bioB
PE=3 SV=1
Length = 329
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 71/125 (56%), Gaps = 30/125 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+GLGE+ EDR+GLLH LATLP HPESVPIN L+ ++GTPL D + +++ E IR IA A
Sbjct: 191 GIVGLGESREDRIGLLHELATLPIHPESVPINMLVPIEGTPLADVEKLDVIEWIRTIAVA 250
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MP + KLLTTPN DQ +F LGL
Sbjct: 251 RIIMPHSYIRLSAGRESLSDSDQALAFMAGANSLFSGDKLLTTPNAGEGKDQALFNKLGL 310
Query: 91 TPKAP 95
T + P
Sbjct: 311 TAEKP 315
>sp|B7H3S4|BIOB_ACIB3 Biotin synthase OS=Acinetobacter baumannii (strain AB307-0294)
GN=bioB PE=3 SV=1
Length = 329
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 71/125 (56%), Gaps = 30/125 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+GLGE+ EDR+GLLH LATLP HPESVPIN L+ ++GTPL D + +++ E IR IA A
Sbjct: 191 GIVGLGESREDRIGLLHELATLPIHPESVPINMLVPIEGTPLADVEKLDVIEWIRTIAVA 250
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MP + KLLTTPN DQ +F LGL
Sbjct: 251 RIIMPHSYIRLSAGRESLSDSDQALAFMAGANSLFSGDKLLTTPNAGEGKDQALFNKLGL 310
Query: 91 TPKAP 95
T + P
Sbjct: 311 TAEKP 315
>sp|Q8PDF0|BIOB_XANCP Biotin synthase OS=Xanthomonas campestris pv. campestris (strain
ATCC 33913 / NCPPB 528 / LMG 568) GN=bioB PE=3 SV=1
Length = 344
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 69/122 (56%), Gaps = 30/122 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE E RVGLLH LATLP HP+SVPIN L+ V GTPL +P++ +E +RMIA A
Sbjct: 193 GIVGMGETREHRVGLLHALATLPAHPDSVPINQLVQVPGTPLHGTEPLDAFEFVRMIAVA 252
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI MPK+M KLLTT N + DQ +F+ LGL
Sbjct: 253 RIAMPKSMVRLSAGREAMSDELQALCFLAGANSIFYGEKLLTTGNPDTERDQGLFQRLGL 312
Query: 91 TP 92
P
Sbjct: 313 RP 314
>sp|B0RMR2|BIOB_XANCB Biotin synthase OS=Xanthomonas campestris pv. campestris (strain
B100) GN=bioB PE=3 SV=1
Length = 344
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 69/122 (56%), Gaps = 30/122 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE E RVGLLH LATLP HP+SVPIN L+ V GTPL +P++ +E +RMIA A
Sbjct: 193 GIVGMGETREHRVGLLHALATLPAHPDSVPINQLVQVPGTPLHGTEPLDAFEFVRMIAVA 252
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI MPK+M KLLTT N + DQ +F+ LGL
Sbjct: 253 RIAMPKSMVRLSAGREAMSDELQALCFLAGANSIFYGEKLLTTGNPDTERDQGLFQRLGL 312
Query: 91 TP 92
P
Sbjct: 313 RP 314
>sp|Q4UZN8|BIOB_XANC8 Biotin synthase OS=Xanthomonas campestris pv. campestris (strain
8004) GN=bioB PE=3 SV=1
Length = 344
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 69/122 (56%), Gaps = 30/122 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE E RVGLLH LATLP HP+SVPIN L+ V GTPL +P++ +E +RMIA A
Sbjct: 193 GIVGMGETREHRVGLLHALATLPAHPDSVPINQLVQVPGTPLHGTEPLDAFEFVRMIAVA 252
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI MPK+M KLLTT N + DQ +F+ LGL
Sbjct: 253 RIAMPKSMVRLSAGREAMSDELQALCFLAGANSIFYGEKLLTTGNPDTERDQGLFQRLGL 312
Query: 91 TP 92
P
Sbjct: 313 RP 314
>sp|Q6FAP9|BIOB_ACIAD Biotin synthase OS=Acinetobacter sp. (strain ADP1) GN=bioB PE=3
SV=2
Length = 329
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 71/125 (56%), Gaps = 30/125 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+GLGE ++DR+GLLH LATLP HPESVPIN L+ ++GTPL D + +++ E IR IA A
Sbjct: 191 GIVGLGEQKQDRIGLLHELATLPIHPESVPINMLVPIEGTPLADVEKLDVTEWIRTIAVA 250
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MP + KLLTTPN DQ++F LGL
Sbjct: 251 RIIMPYSYIRLSAGRESLSDSDQALAFMAGANSLFSGDKLLTTPNAGEGKDQVLFAKLGL 310
Query: 91 TPKAP 95
+ P
Sbjct: 311 VAEKP 315
>sp|Q3M4U9|BIOB_ANAVT Biotin synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC
7937) GN=bioB PE=3 SV=1
Length = 335
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 73/130 (56%), Gaps = 34/130 (26%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+GLGE+ +DRV +L TLATL HPESVPIN L V+GTPL+DQ V +W+++RMIATA
Sbjct: 195 GILGLGESIDDRVAMLQTLATLNPHPESVPINILSQVEGTPLEDQPDVPVWDVVRMIATA 254
Query: 61 RIVMPKA----------------------------------MKLLTTPNNNFVADQLMFK 86
RIVMP + M +TTP ++ ADQ M
Sbjct: 255 RIVMPTSDVRLSAGRARLSQVEQAFCFMAGANSIFSSDDNKMLTVTTPCPDYDADQEMLN 314
Query: 87 VLGLTPKAPS 96
+LGL + PS
Sbjct: 315 LLGLEMRPPS 324
>sp|Q8YVQ3|BIOB_NOSS1 Biotin synthase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=bioB
PE=3 SV=1
Length = 335
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 73/130 (56%), Gaps = 34/130 (26%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+GLGE+ +DRV +L TLATL HPESVPIN L V+GTPL+DQ V +W+++RMIATA
Sbjct: 195 GILGLGESIDDRVAMLQTLATLNPHPESVPINILSQVEGTPLEDQPDVPVWDVVRMIATA 254
Query: 61 RIVMPKA----------------------------------MKLLTTPNNNFVADQLMFK 86
RIVMP + M +TTP ++ ADQ M
Sbjct: 255 RIVMPTSDVRLSAGRARLSQVEQAFCFMAGANSIFSSDDNKMLTVTTPCPDYDADQEMLN 314
Query: 87 VLGLTPKAPS 96
+LGL + PS
Sbjct: 315 LLGLEMRPPS 324
>sp|Q5L5F9|BIOB_CHLAB Biotin synthase OS=Chlamydophila abortus (strain S26/3) GN=bioB
PE=3 SV=1
Length = 331
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 67/127 (52%), Gaps = 31/127 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GIIG+GE EDRV LLH LA PESVP+N L +KGTPL DQ + WE++R IATA
Sbjct: 193 GIIGMGETVEDRVELLHNLARRERMPESVPVNVLWPIKGTPLYDQASISFWEILRTIATA 252
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RIV P++M KLLT NN+ AD M +LG+
Sbjct: 253 RIVFPQSMVRLAAGRAFLSVEQQTLCFIAGANSIFYGEKLLTVDNNDMDADTAMLNLLGM 312
Query: 91 TPKAPSF 97
+ PSF
Sbjct: 313 RHR-PSF 318
>sp|Q255G8|BIOB_CHLFF Biotin synthase OS=Chlamydophila felis (strain Fe/C-56) GN=bioB
PE=3 SV=1
Length = 331
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 68/127 (53%), Gaps = 31/127 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GIIG+GE EDR+GLLHTLA PESVP+N L ++GTPLQDQ+ WE++R IATA
Sbjct: 193 GIIGMGETTEDRIGLLHTLACRERAPESVPVNVLWPIEGTPLQDQQTPSFWEILRTIATA 252
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RIV P +M KLLT NN+ D M +LG+
Sbjct: 253 RIVFPLSMVRLAAGRAFLSVEQQTLCFIAGANSIFYGEKLLTVDNNDMDEDTAMLNLLGM 312
Query: 91 TPKAPSF 97
+ P+F
Sbjct: 313 RHR-PAF 318
>sp|Q1DCV9|BIOB_MYXXD Biotin synthase OS=Myxococcus xanthus (strain DK 1622) GN=bioB PE=3
SV=1
Length = 346
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 72/118 (61%), Gaps = 11/118 (9%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GIIG+GE+ +DR LL TLA HPESVPINAL+AV+GTPLQ+Q+ VE +M+R IATA
Sbjct: 218 GIIGMGESVDDRCNLLRTLANQEHHPESVPINALVAVEGTPLQEQQRVETVDMVRTIATA 277
Query: 61 RIVMPKAMKLLTTPNNNFV-----------ADQLMFKVLGLTPKAPSFHEDEANVSKA 107
RI+MP++M L+ A+ L F LT P + +D A + KA
Sbjct: 278 RILMPQSMVRLSAGRQQMNEEAQLLCMMAGANSLFFGEKLLTTGNPEYTQDMALLEKA 335
>sp|Q4ZMA8|BIOB_PSEU2 Biotin synthase OS=Pseudomonas syringae pv. syringae (strain B728a)
GN=bioB PE=3 SV=1
Length = 352
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 75/138 (54%), Gaps = 30/138 (21%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE+ +DR GLL LA LP HPESVPIN L+ V GTPL++ + V+ ++ IRM+A A
Sbjct: 197 GILGMGESLDDRAGLLIQLANLPEHPESVPINMLVKVAGTPLENAEDVDPFDFIRMLAVA 256
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MPK+ KLLTT N D L+F LG+
Sbjct: 257 RILMPKSHVRLSAGREAMNEQMQALAFFAGANSIFYGDKLLTTANPQADKDMLLFSRLGI 316
Query: 91 TPKAPSFHEDEANVSKAE 108
P+A H DE + + E
Sbjct: 317 KPEAGEGHADEVHQAAIE 334
>sp|Q93GG2|BIOB_ACICA Biotin synthase OS=Acinetobacter calcoaceticus GN=bioB PE=3 SV=1
Length = 329
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 69/123 (56%), Gaps = 30/123 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+GLGE+ DR+GLL LAT+P HPESVPIN L+ ++GTPL + + +++ E IR IA A
Sbjct: 191 GIVGLGESRNDRIGLLQELATMPVHPESVPINMLVPIEGTPLAEVEKLDVTEWIRTIAVA 250
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MP + KLLTTPN DQ++F LGL
Sbjct: 251 RIIMPHSYIRLSAGRESLSDSDQALAFMAGANSLFSGEKLLTTPNAGEGKDQILFAKLGL 310
Query: 91 TPK 93
T +
Sbjct: 311 TAE 313
>sp|Q9KSZ4|BIOB_VIBCH Biotin synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 /
El Tor Inaba N16961) GN=bioB PE=3 SV=1
Length = 350
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 72/131 (54%), Gaps = 30/131 (22%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GIIG+GE+ DR GLL LA LPTHPESVPIN L+ VKGTPL+ VE ++ +R+IA A
Sbjct: 191 GIIGMGESTNDRAGLLVELANLPTHPESVPINMLVKVKGTPLEQVDDVEPFDFVRLIAVA 250
Query: 61 RIVMPKA------------------------------MKLLTTPNNNFVADQLMFKVLGL 90
RI+MPK+ KLLTTPN +D L+FK LG+
Sbjct: 251 RIMMPKSAVRLSAGREKMNEQMQALCFMAGANSIFYGCKLLTTPNPAEDSDMLLFKKLGI 310
Query: 91 TPKAPSFHEDE 101
+ + DE
Sbjct: 311 NREQVAQKPDE 321
>sp|A5F2H3|BIOB_VIBC3 Biotin synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 /
Ogawa 395 / O395) GN=bioB PE=3 SV=1
Length = 350
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 72/131 (54%), Gaps = 30/131 (22%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GIIG+GE+ DR GLL LA LPTHPESVPIN L+ VKGTPL+ VE ++ +R+IA A
Sbjct: 191 GIIGMGESTNDRAGLLVELANLPTHPESVPINMLVKVKGTPLEQVDDVEPFDFVRLIAVA 250
Query: 61 RIVMPKA------------------------------MKLLTTPNNNFVADQLMFKVLGL 90
RI+MPK+ KLLTTPN +D L+FK LG+
Sbjct: 251 RIMMPKSAVRLSAGREKMNEQMQALCFMAGANSIFYGCKLLTTPNPAEDSDMLLFKKLGI 310
Query: 91 TPKAPSFHEDE 101
+ + DE
Sbjct: 311 NREQVAQKPDE 321
>sp|A4XZR9|BIOB_PSEMY Biotin synthase OS=Pseudomonas mendocina (strain ymp) GN=bioB PE=3
SV=1
Length = 352
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 74/138 (53%), Gaps = 30/138 (21%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE+ +DR GLL LA LP HPESVPIN L+ VKGTPL ++K V+ ++ IR +A A
Sbjct: 197 GILGMGESVDDRAGLLIQLANLPEHPESVPINMLVKVKGTPLAEEKDVDPFDFIRTLAVA 256
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MPK+ KLLTT N D +FK LG+
Sbjct: 257 RIMMPKSHVRLSAGREQMNEQMQALAFMAGANSIFYGEKLLTTANPQADKDMALFKRLGI 316
Query: 91 TPKAPSFHEDEANVSKAE 108
P+ H DE + + E
Sbjct: 317 KPEEREEHADEVHQAAIE 334
>sp|A0KIC6|BIOB_AERHH Biotin synthase OS=Aeromonas hydrophila subsp. hydrophila (strain
ATCC 7966 / NCIB 9240) GN=bioB PE=3 SV=1
Length = 362
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 30/122 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE +DR GLL LA LP HPESVPIN L+ VKGTPL++Q+ ++ +E IR IA A
Sbjct: 199 GIVGMGEQAKDRAGLLMALANLPRHPESVPINMLVKVKGTPLENQENLDPFEFIRTIAVA 258
Query: 61 RIVMP-----------------KAM-------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MP +AM KLLTTPN + +D +FK LG+
Sbjct: 259 RIMMPASHVRLSAGREKMNEQMQAMCFMAGANSIFYGCKLLTTPNPDENSDMQLFKRLGI 318
Query: 91 TP 92
P
Sbjct: 319 RP 320
>sp|Q88A98|BIOB_PSESM Biotin synthase OS=Pseudomonas syringae pv. tomato (strain DC3000)
GN=bioB PE=3 SV=1
Length = 352
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 30/138 (21%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE+ +DR GLL LA LP HPESVPIN L+ V GTPL++ + V+ ++ IRM+A A
Sbjct: 197 GILGMGESLDDRAGLLIQLANLPEHPESVPINMLVKVAGTPLENAEDVDPFDFIRMLAVA 256
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MP++ KLLTT N D L+F LG+
Sbjct: 257 RILMPQSHVRLSAGREAMNEQMQALAFFAGANSIFYGDKLLTTANPQADKDMLLFSRLGI 316
Query: 91 TPKAPSFHEDEANVSKAE 108
P+A H DE + + E
Sbjct: 317 KPEAGEGHADEVHQAAIE 334
>sp|Q48CS1|BIOB_PSE14 Biotin synthase OS=Pseudomonas syringae pv. phaseolicola (strain
1448A / Race 6) GN=bioB PE=3 SV=1
Length = 352
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 30/138 (21%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE+ +DR GLL LA LP HPESVPIN L+ V GTPL++ + V+ ++ IRM+A A
Sbjct: 197 GILGMGESLDDRAGLLIQLANLPEHPESVPINMLVKVAGTPLENAEDVDPFDFIRMLAVA 256
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MP++ KLLTT N D L+F LG+
Sbjct: 257 RILMPQSHVRLSAGREAMNEQMQALAFFAGANSIFYGDKLLTTANPQADKDMLLFSRLGI 316
Query: 91 TPKAPSFHEDEANVSKAE 108
P+A H DE + + E
Sbjct: 317 KPEAGEGHADEVHQAAIE 334
>sp|Q87QN6|BIOB_VIBPA Biotin synthase OS=Vibrio parahaemolyticus serotype O3:K6 (strain
RIMD 2210633) GN=bioB PE=3 SV=1
Length = 350
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 72/131 (54%), Gaps = 30/131 (22%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GIIG+GE+ DR GLL LA LPTHPESVPIN L+ VKGTPL+ V+ ++ IR+IA A
Sbjct: 191 GIIGMGESANDRAGLLVELANLPTHPESVPINMLVKVKGTPLETVDDVDPFDFIRLIAIA 250
Query: 61 RIVMPKA------------------------------MKLLTTPNNNFVADQLMFKVLGL 90
RI+MP++ KLLTTPN + D ++FK LG+
Sbjct: 251 RIMMPQSAVRLSAGRENMNEQMQALCFMAGANSVFYGCKLLTTPNPSEDKDMMLFKKLGI 310
Query: 91 TPKAPSFHEDE 101
+ S DE
Sbjct: 311 NSQEVSQKPDE 321
>sp|Q21FY3|BIOB_SACD2 Biotin synthase OS=Saccharophagus degradans (strain 2-40 / ATCC
43961 / DSM 17024) GN=bioB PE=3 SV=1
Length = 350
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 72/131 (54%), Gaps = 30/131 (22%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE E DRVGLL LA +P HPESVPIN L+AV+GTPL+ Q+ ++ ++ IR IA A
Sbjct: 195 GIMGMGEDESDRVGLLLQLANMPQHPESVPINMLVAVEGTPLEQQEALDPFDFIRTIAVA 254
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MP++ KLLTT N D +FK LG+
Sbjct: 255 RILMPQSHVRLSAGREDMNDQTQALAFHAGANSIFYGEKLLTTANPESNKDMQLFKRLGI 314
Query: 91 TPKAPSFHEDE 101
P+ H+ E
Sbjct: 315 NPEKREEHKTE 325
>sp|A4VR88|BIOB_PSEU5 Biotin synthase OS=Pseudomonas stutzeri (strain A1501) GN=bioB PE=3
SV=1
Length = 351
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 74/138 (53%), Gaps = 30/138 (21%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE+ +DR GLL LA LP HPESVPIN L+ VKGTPL +++ V+ ++ IRM+A A
Sbjct: 197 GILGMGESLDDRAGLLIQLANLPEHPESVPINMLVKVKGTPLAEEQDVDPFDFIRMLAVA 256
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MPK+ KLLTT N D +F LG+
Sbjct: 257 RIMMPKSHVRLSAGREQMNEQMQALAFFAGANSIFYGEKLLTTANPQADKDMQLFARLGI 316
Query: 91 TPKAPSFHEDEANVSKAE 108
P+ H DE + + E
Sbjct: 317 KPEERQEHADEVHQAAIE 334
>sp|B2J914|BIOB_NOSP7 Biotin synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=bioB PE=3 SV=1
Length = 335
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 73/135 (54%), Gaps = 34/135 (25%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+GLGE +DRVG+L TLA L HPESVPIN L V GTPL++Q V IW+++RMIATA
Sbjct: 193 GILGLGETVDDRVGMLQTLANLHPHPESVPINILSQVPGTPLENQPDVPIWDIVRMIATA 252
Query: 61 RIVMPKA----------------------------------MKLLTTPNNNFVADQLMFK 86
RI+MP + M +TTP ++ D+ M
Sbjct: 253 RILMPASDVRLSAGRARLSQVEQAFCFMAGANSIFSSDDNKMLTVTTPCPDYDTDREMLN 312
Query: 87 VLGLTPKAPSFHEDE 101
+LGL + PS +++
Sbjct: 313 LLGLGMRPPSQRQEK 327
>sp|Q1I3N6|BIOB_PSEE4 Biotin synthase OS=Pseudomonas entomophila (strain L48) GN=bioB
PE=3 SV=1
Length = 352
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 74/138 (53%), Gaps = 30/138 (21%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE+ +DR GLL LA LP HPESVPIN L+ V GTPL +++ V+ ++ IRM+A A
Sbjct: 197 GILGMGESLDDRAGLLIQLANLPEHPESVPINMLVKVAGTPLAEEEDVDPFDFIRMLAVA 256
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MPK+ KLLTT N D +F LG+
Sbjct: 257 RILMPKSHVRLSAGREQMNEQMQALAFMAGANSIFYGEKLLTTANPQADKDMQLFARLGI 316
Query: 91 TPKAPSFHEDEANVSKAE 108
P+A H DE + + E
Sbjct: 317 KPEAREEHADEVHQAAIE 334
>sp|A5VXF1|BIOB_PSEP1 Biotin synthase OS=Pseudomonas putida (strain F1 / ATCC 700007)
GN=bioB PE=3 SV=1
Length = 352
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 74/138 (53%), Gaps = 30/138 (21%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE+ +DR GLL LA LP HPESVPIN L+ V GTPL +++ V+ ++ IRM+A A
Sbjct: 197 GILGMGESLDDRAGLLIQLANLPEHPESVPINMLVKVAGTPLAEEEDVDPFDFIRMLAVA 256
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MPK+ KLLTT N D +F LG+
Sbjct: 257 RILMPKSHVRLSAGREQMNEQMQALAFMAGANSIFYGEKLLTTANPQADKDMQLFARLGI 316
Query: 91 TPKAPSFHEDEANVSKAE 108
P+A H DE + + E
Sbjct: 317 KPEAREEHADEVHQAAIE 334
>sp|B0KJ53|BIOB_PSEPG Biotin synthase OS=Pseudomonas putida (strain GB-1) GN=bioB PE=3
SV=1
Length = 352
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 74/138 (53%), Gaps = 30/138 (21%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE+ +DR GLL LA LP HPESVPIN L+ V GTPL +++ V+ ++ IRM+A A
Sbjct: 197 GILGMGESLDDRAGLLIQLANLPEHPESVPINMLVKVAGTPLAEEEDVDPFDFIRMLAVA 256
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MPK+ KLLTT N D +F LG+
Sbjct: 257 RILMPKSHVRLSAGREQMNEQMQALAFMAGANSIFYGEKLLTTANPQADKDMQLFARLGI 316
Query: 91 TPKAPSFHEDEANVSKAE 108
P+A H DE + + E
Sbjct: 317 KPEAREEHADEVHQAAIE 334
>sp|Q88QX2|BIOB_PSEPK Biotin synthase OS=Pseudomonas putida (strain KT2440) GN=bioB PE=3
SV=1
Length = 352
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 74/138 (53%), Gaps = 30/138 (21%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE+ +DR GLL LA LP HPESVPIN L+ V GTPL +++ V+ ++ IRM+A A
Sbjct: 197 GILGMGESLDDRAGLLIQLANLPEHPESVPINMLVKVAGTPLAEEEDVDPFDFIRMLAVA 256
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MPK+ KLLTT N D +F LG+
Sbjct: 257 RILMPKSHVRLSAGREQMNEQMQALAFMAGANSIFYGEKLLTTANPQADKDMQLFARLGI 316
Query: 91 TPKAPSFHEDEANVSKAE 108
P+A H DE + + E
Sbjct: 317 KPEAREEHADEVHQAAIE 334
>sp|A4SPR7|BIOB_AERS4 Biotin synthase OS=Aeromonas salmonicida (strain A449) GN=bioB PE=3
SV=1
Length = 362
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 70/122 (57%), Gaps = 30/122 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE +DR GLL LA LP HPESVPIN L+ VKGTPL+++ ++ +E IR IA A
Sbjct: 199 GIVGMGEQAKDRAGLLMALANLPRHPESVPINMLVKVKGTPLENEANLDSFEFIRTIAVA 258
Query: 61 RIVMP-----------------KAM-------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MP +AM KLLTTPN + +D +FK LG+
Sbjct: 259 RIMMPASHVRLSAGREKMNEQMQAMCFMAGANSIFYGCKLLTTPNPDENSDMQLFKRLGI 318
Query: 91 TP 92
P
Sbjct: 319 RP 320
>sp|Q9I618|BIOB_PSEAE Biotin synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1
/ 1C / PRS 101 / LMG 12228) GN=bioB PE=3 SV=1
Length = 352
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 73/138 (52%), Gaps = 30/138 (21%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE+ +DR GLL LA LP HPESVPIN L+ VKGTPL ++K V+ ++ IR +A A
Sbjct: 197 GILGMGESVDDRAGLLIQLANLPEHPESVPINMLVKVKGTPLAEEKDVDPFDFIRTLAVA 256
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MPK+ KLLTT N D +F LG+
Sbjct: 257 RIMMPKSHVRLSAGREQMNEQMQALAFMAGANSIFYGEKLLTTKNPQAEKDMQLFARLGI 316
Query: 91 TPKAPSFHEDEANVSKAE 108
P+ H DE + + E
Sbjct: 317 KPEEREEHADEVHQAAIE 334
>sp|B7V485|BIOB_PSEA8 Biotin synthase OS=Pseudomonas aeruginosa (strain LESB58) GN=bioB
PE=3 SV=1
Length = 352
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 73/138 (52%), Gaps = 30/138 (21%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE+ +DR GLL LA LP HPESVPIN L+ VKGTPL ++K V+ ++ IR +A A
Sbjct: 197 GILGMGESVDDRAGLLIQLANLPEHPESVPINMLVKVKGTPLAEEKDVDPFDFIRTLAVA 256
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MPK+ KLLTT N D +F LG+
Sbjct: 257 RIMMPKSHVRLSAGREQMNEQMQALAFMAGANSIFYGEKLLTTKNPQAEKDMQLFARLGI 316
Query: 91 TPKAPSFHEDEANVSKAE 108
P+ H DE + + E
Sbjct: 317 KPEEREEHADEVHQAAIE 334
>sp|A6UYW0|BIOB_PSEA7 Biotin synthase OS=Pseudomonas aeruginosa (strain PA7) GN=bioB PE=3
SV=1
Length = 352
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 73/138 (52%), Gaps = 30/138 (21%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE+ +DR GLL LA LP HPESVPIN L+ VKGTPL ++K V+ ++ IR +A A
Sbjct: 197 GILGMGESVDDRAGLLIQLANLPEHPESVPINMLVKVKGTPLAEEKDVDPFDFIRTLAVA 256
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MPK+ KLLTT N D +F LG+
Sbjct: 257 RIMMPKSHVRLSAGREQMNEQMQALAFMAGANSIFYGEKLLTTKNPQAEKDMQLFARLGI 316
Query: 91 TPKAPSFHEDEANVSKAE 108
P+ H DE + + E
Sbjct: 317 KPEEREEHADEVHQAAIE 334
>sp|Q02TR6|BIOB_PSEAB Biotin synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14)
GN=bioB PE=3 SV=1
Length = 352
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 73/138 (52%), Gaps = 30/138 (21%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE+ +DR GLL LA LP HPESVPIN L+ VKGTPL ++K V+ ++ IR +A A
Sbjct: 197 GILGMGESVDDRAGLLIQLANLPEHPESVPINMLVKVKGTPLAEEKDVDPFDFIRTLAVA 256
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MPK+ KLLTT N D +F LG+
Sbjct: 257 RIMMPKSHVRLSAGREQMNEQMQALAFMAGANSIFYGEKLLTTKNPQAEKDMQLFARLGI 316
Query: 91 TPKAPSFHEDEANVSKAE 108
P+ H DE + + E
Sbjct: 317 KPEEREEHADEVHQAAIE 334
>sp|A7MX36|BIOB_VIBHB Biotin synthase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120)
GN=bioB PE=3 SV=2
Length = 350
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 71/131 (54%), Gaps = 30/131 (22%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GIIG+GE+ DR GLL LA LP HPESVPIN L+ VKGTPL++ VE ++ IR+IA A
Sbjct: 191 GIIGMGESANDRAGLLVELANLPVHPESVPINMLVKVKGTPLEEVDDVEPFDFIRLIAIA 250
Query: 61 RIVMPKA------------------------------MKLLTTPNNNFVADQLMFKVLGL 90
RI+MP++ KLLTTPN + D ++F LG+
Sbjct: 251 RIMMPQSAVRLSAGRENMNEQMQALCFMAGANSVFYGCKLLTTPNPSEDKDMMLFNKLGI 310
Query: 91 TPKAPSFHEDE 101
+ S DE
Sbjct: 311 NSQEVSQKPDE 321
>sp|A1U4B2|BIOB_MARAV Biotin synthase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM
11845 / VT8) GN=bioB PE=3 SV=1
Length = 352
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 70/123 (56%), Gaps = 30/123 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE E+DRVGLL LA LP HPESVP+N L+ VKGTPL+D + ++ ++ IR+IA A
Sbjct: 194 GIMGMGEDEDDRVGLLVQLANLPQHPESVPVNMLVKVKGTPLEDVEDLDPFDFIRIIAVA 253
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MP + KLLTT N AD +F+ LG+
Sbjct: 254 RIMMPASHVRLSAGREQMNEQMQALCFMAGANSIFYGEKLLTTSNPEADADMQLFRKLGI 313
Query: 91 TPK 93
P+
Sbjct: 314 RPE 316
>sp|B4RBP5|BIOB_PHEZH Biotin synthase OS=Phenylobacterium zucineum (strain HLK1) GN=bioB
PE=3 SV=1
Length = 331
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 51/68 (75%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE DR GLLH LATLP HP+S+PIN L+ + GTPL D K V+ E +RMIA A
Sbjct: 206 GIVGMGETRRDRAGLLHQLATLPAHPDSLPINDLMPIPGTPLGDSKAVDPLEFVRMIAVA 265
Query: 61 RIVMPKAM 68
RIV PK+M
Sbjct: 266 RIVCPKSM 273
>sp|B1JE55|BIOB_PSEPW Biotin synthase OS=Pseudomonas putida (strain W619) GN=bioB PE=3
SV=1
Length = 352
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 74/138 (53%), Gaps = 30/138 (21%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE+ +DR GLL LA LP HPESVPIN L+ V GTPL +++ V+ ++ IRM+A A
Sbjct: 197 GILGMGESLDDRAGLLIQLANLPEHPESVPINMLVKVAGTPLAEEEDVDPFDFIRMLAVA 256
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
R++MPK+ KLLTT N D +F LG+
Sbjct: 257 RLLMPKSHVRLSAGREQMNEQMQALAFMAGANSIFYGEKLLTTANPQADKDMQLFARLGI 316
Query: 91 TPKAPSFHEDEANVSKAE 108
P+A H DE + + E
Sbjct: 317 KPEAREEHADEVHQAAIE 334
>sp|Q4K4T2|BIOB_PSEF5 Biotin synthase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477) GN=bioB PE=3 SV=2
Length = 351
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 74/138 (53%), Gaps = 30/138 (21%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GI+G+GE+ +DR GLL LA LP HPESVPIN L+ V GTPL++ + V+ ++ IRM+A A
Sbjct: 197 GILGMGESLDDRAGLLIQLANLPEHPESVPINMLVKVAGTPLENAEEVDPFDFIRMLAVA 256
Query: 61 RIVMPKAM------------------------------KLLTTPNNNFVADQLMFKVLGL 90
RI+MP++ KLLTT N D +F LG+
Sbjct: 257 RILMPQSHVRLSAGREAMNEQMQALAFFAGANSIFYGDKLLTTANPQADKDMQLFARLGI 316
Query: 91 TPKAPSFHEDEANVSKAE 108
P+A H DE + + E
Sbjct: 317 QPEAREEHADEVHQAAIE 334
>sp|B6ESC7|BIOB_ALISL Biotin synthase OS=Aliivibrio salmonicida (strain LFI1238) GN=bioB
PE=3 SV=1
Length = 350
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 68/121 (56%), Gaps = 30/121 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GIIG+GE+ DR GL LA LP HPESVP+N L+ VKGTPL+D + V+ ++ IR+IA A
Sbjct: 191 GIIGMGESVNDRAGLFVELANLPQHPESVPVNMLVKVKGTPLEDAEDVDPFDFIRLIAVA 250
Query: 61 RIVMPKA------------------------------MKLLTTPNNNFVADQLMFKVLGL 90
RI+MP++ KLLTTPN + +D +FK LG+
Sbjct: 251 RIMMPESAVRLSAGRESMNEQMQALCFMAGTNSVFYGCKLLTTPNPDEDSDMQLFKKLGV 310
Query: 91 T 91
Sbjct: 311 N 311
>sp|B1WN69|BIOB_VIBF1 Biotin synthase OS=Vibrio fischeri (strain ATCC 700601 / ES114)
GN=bioB PE=3 SV=1
Length = 350
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 67/121 (55%), Gaps = 30/121 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GIIG+GE+ DR GL LA LP HPESVP+N L+ VKGTPL+D + V+ ++ IR+IA A
Sbjct: 191 GIIGMGESASDRAGLFVELANLPQHPESVPVNMLVKVKGTPLEDAEDVDPFDFIRLIAVA 250
Query: 61 RIVMPKA------------------------------MKLLTTPNNNFVADQLMFKVLGL 90
RI+MP++ KLLTTPN + D +FK LG+
Sbjct: 251 RIMMPESAVRLSAGRESMNEQMQALCFMAGANSVFYGCKLLTTPNPDEDTDMQLFKKLGV 310
Query: 91 T 91
Sbjct: 311 N 311
>sp|B5EUQ0|BIOB_VIBFM Biotin synthase OS=Vibrio fischeri (strain MJ11) GN=bioB PE=3 SV=1
Length = 350
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 67/121 (55%), Gaps = 30/121 (24%)
Query: 1 GIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 60
GIIG+GE+ DR GL LA LP HPESVP+N L+ VKGTPL+D + V+ ++ IR+IA A
Sbjct: 191 GIIGMGESASDRAGLFVELANLPQHPESVPVNMLVKVKGTPLEDAEDVDPFDFIRLIAVA 250
Query: 61 RIVMPKA------------------------------MKLLTTPNNNFVADQLMFKVLGL 90
RI+MP++ KLLTTPN + D +FK LG+
Sbjct: 251 RIMMPESAVRLSAGRESMNEQMQALCFMAGANSVFYGCKLLTTPNPDEDTDMQLFKKLGV 310
Query: 91 T 91
Sbjct: 311 N 311
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,993,984
Number of Sequences: 539616
Number of extensions: 1532782
Number of successful extensions: 3246
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 2319
Number of HSP's gapped (non-prelim): 803
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)