BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041312
(743 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/316 (38%), Positives = 173/316 (54%), Gaps = 7/316 (2%)
Query: 388 QDLYVRVDAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQNGK 447
QD + V A E D + L F L + A+++FS+ N LG GGFG VYKG L +G
Sbjct: 6 QDHFFDVPAEE--DPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGT 63
Query: 448 EIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLD 506
+AVKRL QG E +F+TE+ +I+ HRNL+ + G C+ E++L+Y Y+ N S+
Sbjct: 64 LVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 123
Query: 507 VYIFDEAK-RSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKI 565
+ + + + LDW KR I G ARG+ YLH +IIHRD+KA+N+LLD +
Sbjct: 124 SCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 183
Query: 566 SDFGMARIFGGDQIEENTNRVV-GTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRR 624
DFG+A++ D + + V GT G++APEY G S K+DV+ +GV+LLE+I G+R
Sbjct: 184 GDFGLAKLM--DYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 241
Query: 625 NNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQA 684
L+ V L KE VD L + E+ + I + LLC Q
Sbjct: 242 AFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSP 301
Query: 685 TDRPNMSAVVSMLGSD 700
+RP MS VV ML D
Sbjct: 302 MERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 163/295 (55%), Gaps = 5/295 (1%)
Query: 409 LPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIE-EFKT 467
L F L + A+++F + N LG GGFG VYKG L +G +AVKRL QG E +F+T
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 468 EIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAK-RSLLDWSKRFEI 526
E+ +I+ HRNL+ + G C+ E++L+Y Y+ N S+ + + + + LDW KR I
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRV 586
G ARG+ YLH +IIHRD+KA+N+LLD + DFG+A++ D + +
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDXHVXXA 194
Query: 587 V-GTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWD 645
V G G++APEY G S K+DV+ +GV+LLE+I G+R L+ V
Sbjct: 195 VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 646 LWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLGSD 700
L KE VD L + E+ + I + LLC Q +RP MS VV ML D
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 173/302 (57%), Gaps = 23/302 (7%)
Query: 405 NSEYLPVFD-----LSNIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSG 459
+S YL F+ L ++ ATN+F +G G FG VYKGVL++G ++A+KR + S
Sbjct: 17 SSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS 76
Query: 460 QGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSL-L 518
QGIEEF+TEI ++ +H +LVS++G C E E +LIY+Y+ N +L +++ ++ +
Sbjct: 77 QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSM 136
Query: 519 DWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQ 578
W +R EI G ARG+ YLH + IIHRD+K+ N+LLD PKI+DFG+++ G +
Sbjct: 137 SWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTE 191
Query: 579 IEEN--TNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQ---G 633
+++ V GT GY+ PEY ++G + KSDVYSFGV+L E++ R L +
Sbjct: 192 LDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN 251
Query: 634 SGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCI-HLGLLCVQEQATDRPNMSA 692
W + H G + VD +L + PE LR + C+ + DRP+M
Sbjct: 252 LAEWAVESH-----NNGQLEQIVDPNLADK-IRPESLRKFGDTAVKCLALSSEDRPSMGD 305
Query: 693 VV 694
V+
Sbjct: 306 VL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 173/301 (57%), Gaps = 21/301 (6%)
Query: 405 NSEYLPVFD-----LSNIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSG 459
+S YL F+ L ++ ATN+F +G G FG VYKGVL++G ++A+KR + S
Sbjct: 17 SSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS 76
Query: 460 QGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSL-L 518
QGIEEF+TEI ++ +H +LVS++G C E E +LIY+Y+ N +L +++ ++ +
Sbjct: 77 QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSM 136
Query: 519 DWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQ 578
W +R EI G ARG+ YLH + IIHRD+K+ N+LLD PKI+DFG+++ G +
Sbjct: 137 SWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKK-GTEL 192
Query: 579 IEENTNRVV-GTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQ---GS 634
+ + VV GT GY+ PEY ++G + KSDVYSFGV+L E++ R L +
Sbjct: 193 GQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNL 252
Query: 635 GSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCI-HLGLLCVQEQATDRPNMSAV 693
W + H G + VD +L + PE LR + C+ + DRP+M V
Sbjct: 253 AEWAVESH-----NNGQLEQIVDPNLADK-IRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
Query: 694 V 694
+
Sbjct: 307 L 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 162/310 (52%), Gaps = 24/310 (7%)
Query: 398 ELDDSRRNSEYLPVFDLSNIAAATNDFSS------DNKLGEGGFGSVYKGVLQNGKEIAV 451
E+ D+R +S ++L N+ TN+F NK+GEGGFG VYKG + N +AV
Sbjct: 6 EVSDTRFHS--FSFYELKNV---TNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAV 59
Query: 452 KRLSRSSGQGIEE----FKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDV 507
K+L+ EE F EI ++A+ QH NLV +LG + + L+Y Y+PN SL
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 508 YIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISD 567
+ L W R +I G A GI +LH++ IHRD+K++N+LLD A KISD
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 176
Query: 568 FGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNT 627
FG+AR +R+VGT YMAPE A+ G + KSD+YSFGV+LLEII G
Sbjct: 177 FGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 628 FHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQATDR 687
H E L +E T + +DK + ++ + + + C+ E+ R
Sbjct: 236 EHREP---QLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKR 291
Query: 688 PNMSAVVSML 697
P++ V +L
Sbjct: 292 PDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 161/310 (51%), Gaps = 24/310 (7%)
Query: 398 ELDDSRRNSEYLPVFDLSNIAAATNDFSS------DNKLGEGGFGSVYKGVLQNGKEIAV 451
E+ D+R +S ++L N+ TN+F NK+GEGGFG VYKG + N +AV
Sbjct: 6 EVSDTRFHS--FSFYELKNV---TNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAV 59
Query: 452 KRLSRSSGQGIEE----FKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDV 507
K+L+ EE F EI ++A+ QH NLV +LG + + L+Y Y+PN SL
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 508 YIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISD 567
+ L W R +I G A GI +LH++ IHRD+K++N+LLD A KISD
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISD 176
Query: 568 FGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNT 627
FG+AR R+VGT YMAPE A+ G + KSD+YSFGV+LLEII G
Sbjct: 177 FGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 628 FHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQATDR 687
H E L +E T + +DK + ++ + + + C+ E+ R
Sbjct: 236 EHREP---QLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKR 291
Query: 688 PNMSAVVSML 697
P++ V +L
Sbjct: 292 PDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 160/309 (51%), Gaps = 24/309 (7%)
Query: 399 LDDSRRNSEYLPVFDLSNIAAATNDFSS------DNKLGEGGFGSVYKGVLQNGKEIAVK 452
+ D+R +S ++L N+ TN+F NK+GEGGFG VYKG + N +AVK
Sbjct: 1 VSDTRFHS--FSFYELKNV---TNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVK 54
Query: 453 RLSRSSGQGIEE----FKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVY 508
+L+ EE F EI ++A+ QH NLV +LG + + L+Y Y+PN SL
Sbjct: 55 KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR 114
Query: 509 IFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDF 568
+ L W R +I G A GI +LH++ IHRD+K++N+LLD A KISDF
Sbjct: 115 LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDF 171
Query: 569 GMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTF 628
G+AR R+VGT YMAPE A+ G + KSD+YSFGV+LLEII G
Sbjct: 172 GLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 230
Query: 629 HLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRP 688
H E L +E T + +DK + ++ + + + C+ E+ RP
Sbjct: 231 HREP---QLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRP 286
Query: 689 NMSAVVSML 697
++ V +L
Sbjct: 287 DIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 124/221 (56%), Gaps = 18/221 (8%)
Query: 412 FDLSNIAAATNDFSS------DNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEE- 464
++L N+ TN+F NK GEGGFG VYKG + N +AVK+L+ EE
Sbjct: 9 YELKNV---TNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 465 ---FKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWS 521
F EI + A+ QH NLV +LG + + L+Y Y PN SL + L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 522 KRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEE 581
R +I G A GI +LH++ IHRD+K++N+LLD A KISDFG+AR
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 582 NTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+R+VGT Y APE A+ G + KSD+YSFGV+LLEII G
Sbjct: 182 XXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 6/199 (3%)
Query: 423 DFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSS--GQGIEEFKTEIALIAQLQHRNL 480
D + K+G G FG+V++ +G ++AVK L + + EF E+A++ +L+H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +G + ++ EYL SL + R LD +R + +A+G+ YLH +
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-N 155
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
I+HRDLK+ N+L+D K+ DFG++R+ + + GT +MAPE +
Sbjct: 156 RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLX--SKXAAGTPEWMAPEVLRD 213
Query: 601 GLFSTKSDVYSFGVLLLEI 619
+ KSDVYSFGV+L E+
Sbjct: 214 EPSNEKSDVYSFGVILWEL 232
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 108/199 (54%), Gaps = 6/199 (3%)
Query: 423 DFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSS--GQGIEEFKTEIALIAQLQHRNL 480
D + K+G G FG+V++ +G ++AVK L + + EF E+A++ +L+H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +G + ++ EYL SL + R LD +R + +A+G+ YLH +
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-N 155
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
I+HR+LK+ N+L+D K+ DFG++R+ + + GT +MAPE +
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS--AAGTPEWMAPEVLRD 213
Query: 601 GLFSTKSDVYSFGVLLLEI 619
+ KSDVYSFGV+L E+
Sbjct: 214 EPSNEKSDVYSFGVILWEL 232
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 112/216 (51%), Gaps = 29/216 (13%)
Query: 423 DFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSS----GQGIEEFKTEIALIAQLQHR 478
+ + + +G GGFG VY+ G E+AVK Q IE + E L A L+H
Sbjct: 8 ELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRS----LLDWSKRFEIICGIARGI 534
N++++ G C++E L+ E+ L+ + KR L++W+ + IARG+
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVL--SGKRIPPDILVNWAVQ------IARGM 118
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNP--------KISDFGMARIFGGDQIEENTNRV 586
YLH ++ + IIHRDLK+SN+L+ + KI+DFG+AR +
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSA 174
Query: 587 VGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
G Y +MAPE +FS SDV+S+GVLL E++ G
Sbjct: 175 AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 130/273 (47%), Gaps = 29/273 (10%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G FG V+ G N ++AVK L + ++ F E L+ LQH LV +
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 488 IEEQEKMLIYEYLPNKSL-DVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRII 546
E+ +I EY+ SL D DE + LL K + IA G+ Y+ R I
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIE---RKNYI 132
Query: 547 HRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFS 604
HRDL+A+NVL+ ++ KI+DFG+AR+ + E T R + + APE G F+
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDN---EYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 605 TKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESC 664
KSDV+SFG+LL EI+ T+ G N V +G M V+
Sbjct: 190 IKSDVWSFGILLYEIV------TYGKIPYPGRTN--ADVMTALSQGYRMPRVEN------ 235
Query: 665 CAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
C E+ + +C +E+A +RP + S+L
Sbjct: 236 CPDELYDIMK---MCWKEKAEERPTFDYLQSVL 265
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 90
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E ++ EY+P +L Y+ E R + + I+ + YL +
Sbjct: 91 VQLLGVCTLEPPFYIVTEYMPYGNLLDYL-RECNREEVTAVVLLYMATQISSAMEYLEKK 149
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 150 N---FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 205
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V+DL ++G ME +
Sbjct: 206 NTFSIKSDVWAFGVLLWEI------ATYGMSPYPGI--DLSQVYDLLEKGYRMEQPEG-- 255
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMS 691
C P++ + C + DRP+ +
Sbjct: 256 ----CPPKVYELMR---ACWKWSPADRPSFA 279
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 133/275 (48%), Gaps = 33/275 (12%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
KLG G FG V+ G N ++AVK L + ++ F E L+ LQH LV +
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 488 IEEQEKMLIYEYLPNKSL-DVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRII 546
+E+ +I E++ SL D DE + LL K + IA G+ Y+ R I
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIE---RKNYI 131
Query: 547 HRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN--TNRVVGTY--GYMAPEYAMEGL 602
HRDL+A+NVL+ ++ KI+DFG+AR+ IE+N T R + + APE G
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARV-----IEDNEYTAREGAKFPIKWTAPEAINFGC 186
Query: 603 FSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGE 662
F+ KS+V+SFG+LL EI+ T+ G N V +G M ++
Sbjct: 187 FTIKSNVWSFGILLYEIV------TYGKIPYPGRTN--ADVMSALSQGYRMPRMEN---- 234
Query: 663 SCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
C E+ + +C +E+A +RP + S+L
Sbjct: 235 --CPDELYDIMK---MCWKEKAEERPTFDYLQSVL 264
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 107/204 (52%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LG+G FGSV Y + N G+ +AVK+L S+ + + +F+ EI ++ LQH N+V
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 483 ILGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G C + LI EYLP SL Y+ A+R +D K + I +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER--IDHIKLLQYTSQICKGMEYL--- 133
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGD----QIEENTNRVVGTYGYMAPE 596
R IHRDL N+L++ KI DFG+ ++ D +++E + Y APE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY---APE 190
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
E FS SDV+SFGV+L E+
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELF 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LG+G FGSV Y + N G+ +AVK+L S+ + + +F+ EI ++ LQH N+V
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 483 ILGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G C + LI EYLP SL Y+ +R +D K + I +G+ YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 161
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGD----QIEENTNRVVGTYGYMAPE 596
R IHRDL N+L++ KI DFG+ ++ D +++E + Y APE
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY---APE 218
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
E FS SDV+SFGV+L E+
Sbjct: 219 SLTESKFSVASDVWSFGVVLYELF 242
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 112/201 (55%), Gaps = 20/201 (9%)
Query: 430 LGEGGFGSVYKGVLQNGKE-----IAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVSI 483
LG G FG+VYKG+ E +A+K L+ ++G EF E ++A + H +LV +
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 484 LGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIARGILYLHQ 539
LG C+ + L+ + +P+ L Y+ + + LL+W + IA+G++YL +
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE 158
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM 599
R++HRDL A NVL+ + + KI+DFG+AR+ GD+ E N + +MA E
Sbjct: 159 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 600 EGLFSTKSDVYSFGVLLLEII 620
F+ +SDV+S+GV + E++
Sbjct: 216 YRKFTHQSDVWSYGVTIWELM 236
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LG+G FGSV Y + N G+ +AVK+L S+ + + +F+ EI ++ LQH N+V
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 483 ILGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G C + LI EYLP SL Y+ +R +D K + I +G+ YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 136
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGD----QIEENTNRVVGTYGYMAPE 596
R IHRDL N+L++ KI DFG+ ++ D +++E + Y APE
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY---APE 193
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
E FS SDV+SFGV+L E+
Sbjct: 194 SLTESKFSVASDVWSFGVVLYELF 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LG+G FGSV Y + N G+ +AVK+L S+ + + +F+ EI ++ LQH N+V
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 483 ILGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G C + LI EYLP SL Y+ +R +D K + I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 130
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGD----QIEENTNRVVGTYGYMAPE 596
R IHRDL N+L++ KI DFG+ ++ D +++E + Y APE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY---APE 187
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
E FS SDV+SFGV+L E+
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELF 211
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LG+G FGSV Y + N G+ +AVK+L S+ + + +F+ EI ++ LQH N+V
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 483 ILGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G C + LI EYLP SL Y+ +R +D K + I +G+ YL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 129
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGD----QIEENTNRVVGTYGYMAPE 596
R IHRDL N+L++ KI DFG+ ++ D +++E + Y APE
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY---APE 186
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
E FS SDV+SFGV+L E+
Sbjct: 187 SLTESKFSVASDVWSFGVVLYELF 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LG+G FGSV Y + N G+ +AVK+L S+ + + +F+ EI ++ LQH N+V
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 483 ILGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G C + LI EYLP SL Y+ +R +D K + I +G+ YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 134
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGD----QIEENTNRVVGTYGYMAPE 596
R IHRDL N+L++ KI DFG+ ++ D +++E + Y APE
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY---APE 191
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
E FS SDV+SFGV+L E+
Sbjct: 192 SLTESKFSVASDVWSFGVVLYELF 215
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 113/201 (56%), Gaps = 20/201 (9%)
Query: 430 LGEGGFGSVYKGVLQNGKE-----IAVKRLSRSSG-QGIEEFKTEIALIAQLQHRNLVSI 483
LG G FG+VYKG+ E +A+K L+ ++G + EF E ++A + H +LV +
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 484 LGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIARGILYLHQ 539
LG C+ + L+ + +P+ L Y+ + + LL+W + IA+G++YL +
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE 135
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM 599
R++HRDL A NVL+ + + KI+DFG+AR+ GD+ E N + +MA E
Sbjct: 136 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 600 EGLFSTKSDVYSFGVLLLEII 620
F+ +SDV+S+GV + E++
Sbjct: 193 YRKFTHQSDVWSYGVTIWELM 213
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LG+G FGSV Y + N G+ +AVK+L S+ + + +F+ EI ++ LQH N+V
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 483 ILGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G C + LI EYLP SL Y+ +R +D K + I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 130
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGD----QIEENTNRVVGTYGYMAPE 596
R IHRDL N+L++ KI DFG+ ++ D +++E + Y APE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY---APE 187
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
E FS SDV+SFGV+L E+
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELF 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LG+G FGSV Y + N G+ +AVK+L S+ + + +F+ EI ++ LQH N+V
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 483 ILGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G C + LI EYLP SL Y+ +R +D K + I +G+ YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 128
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGD----QIEENTNRVVGTYGYMAPE 596
R IHRDL N+L++ KI DFG+ ++ D +++E + Y APE
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY---APE 185
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
E FS SDV+SFGV+L E+
Sbjct: 186 SLTESKFSVASDVWSFGVVLYELF 209
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LG+G FGSV Y + N G+ +AVK+L S+ + + +F+ EI ++ LQH N+V
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 483 ILGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G C + LI EYLP SL Y+ +R +D K + I +G+ YL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 135
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGD----QIEENTNRVVGTYGYMAPE 596
R IHRDL N+L++ KI DFG+ ++ D +++E + Y APE
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY---APE 192
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
E FS SDV+SFGV+L E+
Sbjct: 193 SLTESKFSVASDVWSFGVVLYELF 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LG+G FGSV Y + N G+ +AVK+L S+ + + +F+ EI ++ LQH N+V
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 483 ILGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G C + LI EYLP SL Y+ +R +D K + I +G+ YL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 137
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGD----QIEENTNRVVGTYGYMAPE 596
R IHRDL N+L++ KI DFG+ ++ D +++E + Y APE
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY---APE 194
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
E FS SDV+SFGV+L E+
Sbjct: 195 SLTESKFSVASDVWSFGVVLYELF 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LG+G FGSV Y + N G+ +AVK+L S+ + + +F+ EI ++ LQH N+V
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 483 ILGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G C + LI EYLP SL Y+ +R +D K + I +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 133
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGD----QIEENTNRVVGTYGYMAPE 596
R IHRDL N+L++ KI DFG+ ++ D +++E + Y APE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY---APE 190
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
E FS SDV+SFGV+L E+
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELF 214
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LG+G FGSV Y + N G+ +AVK+L S+ + + +F+ EI ++ LQH N+V
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 483 ILGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G C + LI EYLP SL Y+ +R +D K + I +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 148
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGD----QIEENTNRVVGTYGYMAPE 596
R IHRDL N+L++ KI DFG+ ++ D +++E + Y APE
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY---APE 205
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
E FS SDV+SFGV+L E+
Sbjct: 206 SLTESKFSVASDVWSFGVVLYELF 229
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LG+G FGSV Y + N G+ +AVK+L S+ + + +F+ EI ++ LQH N+V
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 483 ILGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G C + LI EYLP SL Y+ +R +D K + I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 130
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGD----QIEENTNRVVGTYGYMAPE 596
R IHRDL N+L++ KI DFG+ ++ D +++E + Y APE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY---APE 187
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
E FS SDV+SFGV+L E+
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELF 211
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LG+G FGSV Y + N G+ +AVK+L S+ + + +F+ EI ++ LQH N+V
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 483 ILGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G C + LI EYLP SL Y+ +R +D K + I +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 148
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGD----QIEENTNRVVGTYGYMAPE 596
R IHRDL N+L++ KI DFG+ ++ D +++E + Y APE
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY---APE 205
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
E FS SDV+SFGV+L E+
Sbjct: 206 SLTESKFSVASDVWSFGVVLYELF 229
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 110/214 (51%), Gaps = 25/214 (11%)
Query: 428 NKLGEGGFGSVYKGVL------QNGKEIAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNL 480
+LGE FG VYKG L + + +A+K L ++ G EEF+ E L A+LQH N+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIF-------------DEAKRSLLDWSKRFEII 527
V +LG ++Q +I+ Y + L ++ D +S L+ ++
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 528 CGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNRV 586
IA G+ YL S ++H+DL NVL+ +N KISD G+ R ++ D + N +
Sbjct: 152 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 587 VGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+ +MAPE M G FS SD++S+GV+L E+
Sbjct: 209 LPI-RWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 241
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 110/214 (51%), Gaps = 25/214 (11%)
Query: 428 NKLGEGGFGSVYKGVL------QNGKEIAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNL 480
+LGE FG VYKG L + + +A+K L ++ G EEF+ E L A+LQH N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIF-------------DEAKRSLLDWSKRFEII 527
V +LG ++Q +I+ Y + L ++ D +S L+ ++
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 528 CGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNRV 586
IA G+ YL S ++H+DL NVL+ +N KISD G+ R ++ D + N +
Sbjct: 135 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 587 VGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+ +MAPE M G FS SD++S+GV+L E+
Sbjct: 192 LPI-RWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G FG V+ G ++AVK L + S + F E L+ QLQH+ LV +
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E +I EY+ N SL V L +K ++ IA G+ ++ + + IH
Sbjct: 86 TQE-PIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 140
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFST 605
RDL+A+N+L+ ++ KI+DFG+AR+ + E T R + + APE G F+
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDN---EXTAREGAKFPIKWTAPEAINYGTFTI 197
Query: 606 KSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCC 665
KSDV+SFG+LL EI+ R + NL + G M D C
Sbjct: 198 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYRMVRPDN------C 243
Query: 666 APEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
E+ + + LC +E+ DRP + S+L
Sbjct: 244 PEELYQLMR---LCWKERPEDRPTFDYLRSVL 272
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G FG V+ G ++AVK L + S + F E L+ QLQH+ LV +
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E +I EY+ N SL V L +K ++ IA G+ ++ + + IH
Sbjct: 84 TQE-PIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 138
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFST 605
RDL+A+N+L+ ++ KI+DFG+AR+ + E T R + + APE G F+
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDN---EXTAREGAKFPIKWTAPEAINYGTFTI 195
Query: 606 KSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCC 665
KSDV+SFG+LL EI+ R + NL + G M D C
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYRMVRPDN------C 241
Query: 666 APEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
E+ + + LC +E+ DRP + S+L
Sbjct: 242 PEELYQLMR---LCWKERPEDRPTFDYLRSVL 270
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 106/203 (52%), Gaps = 19/203 (9%)
Query: 429 KLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSI 483
+LG+G FGSV Y + N G+ +AVK+L S+ + + +F+ EI ++ LQH N+V
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 484 LGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
G C + LI E+LP SL Y+ +R +D K + I +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER--IDHIKLLQYTSQICKGMEYL---G 134
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGD----QIEENTNRVVGTYGYMAPEY 597
R IHRDL N+L++ KI DFG+ ++ D +++E + Y APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY---APES 191
Query: 598 AMEGLFSTKSDVYSFGVLLLEII 620
E FS SDV+SFGV+L E+
Sbjct: 192 LTESKFSVASDVWSFGVVLYELF 214
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G FG V+ G ++AVK L + S + F E L+ QLQH+ LV +
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E +I EY+ N SL V L +K ++ IA G+ ++ + + IH
Sbjct: 87 TQE-PIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 141
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFST 605
RDL+A+N+L+ ++ KI+DFG+AR+ + E T R + + APE G F+
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDN---EXTAREGAKFPIKWTAPEAINYGTFTI 198
Query: 606 KSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCC 665
KSDV+SFG+LL EI+ R + NL + G M D C
Sbjct: 199 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYRMVRPDN------C 244
Query: 666 APEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
E+ + + LC +E+ DRP + S+L
Sbjct: 245 PEELYQLMR---LCWKERPEDRPTFDYLRSVL 273
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G FG V+ G ++AVK L + S + F E L+ QLQH+ LV +
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E +I EY+ N SL V L +K ++ IA G+ ++ + + IH
Sbjct: 78 TQEP-IYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFST 605
RDL+A+N+L+ ++ KI+DFG+AR+ + E T R + + APE G F+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDN---EXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 606 KSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCC 665
KSDV+SFG+LL EI+ R + NL + G M D C
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYRMVRPDN------C 235
Query: 666 APEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
E+ + + LC +E+ DRP + S+L
Sbjct: 236 PEELYQLMR---LCWKERPEDRPTFDYLRSVL 264
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G FG V+ G ++AVK L + S + F E L+ QLQH+ LV +
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E +I EY+ N SL V L +K ++ IA G+ ++ + + IH
Sbjct: 80 TQEP-IYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 134
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFST 605
RDL+A+N+L+ ++ KI+DFG+AR+ + E T R + + APE G F+
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDN---EXTAREGAKFPIKWTAPEAINYGTFTI 191
Query: 606 KSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCC 665
KSDV+SFG+LL EI+ R + NL + G M D C
Sbjct: 192 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYRMVRPDN------C 237
Query: 666 APEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
E+ + + LC +E+ DRP + S+L
Sbjct: 238 PEELYQLMR---LCWKERPEDRPTFDYLRSVL 266
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G FG V+ G ++AVK L + S + F E L+ QLQH+ LV +
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E +I EY+ N SL V L +K ++ IA G+ ++ + + IH
Sbjct: 88 TQE-PIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 142
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFST 605
RDL+A+N+L+ ++ KI+DFG+AR+ + E T R + + APE G F+
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDN---EYTAREGAKFPIKWTAPEAINYGTFTI 199
Query: 606 KSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCC 665
KSDV+SFG+LL EI+ R + NL + G M D C
Sbjct: 200 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYRMVRPDN------C 245
Query: 666 APEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
E+ + + LC +E+ DRP + S+L
Sbjct: 246 PEELYQLMR---LCWKERPEDRPTFDYLRSVL 274
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G FG V+ G ++AVK L + S + F E L+ QLQH+ LV +
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E +I EY+ N SL V L +K ++ IA G+ ++ + + IH
Sbjct: 78 TQEP-IYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFST 605
RDL+A+N+L+ ++ KI+DFG+AR+ + E T R + + APE G F+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDN---EXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 606 KSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCC 665
KSDV+SFG+LL EI+ R + NL + G M D C
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYRMVRPDN------C 235
Query: 666 APEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
E+ + + LC +E+ DRP + S+L
Sbjct: 236 PEELYQLMR---LCWKERPEDRPTFDYLRSVL 264
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R ++ + I+ + YL +
Sbjct: 77 VQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 191
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 192 NKFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER----- 238
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 239 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 267
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G FG V+ G ++AVK L + S + F E L+ QLQH+ LV +
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E +I EY+ N SL V L +K ++ IA G+ ++ + + IH
Sbjct: 84 TQEP-IYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 138
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFST 605
RDL+A+N+L+ ++ KI+DFG+AR+ + E T R + + APE G F+
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDN---EYTAREGAKFPIKWTAPEAINYGTFTI 195
Query: 606 KSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCC 665
KSDV+SFG+LL EI+ R + NL + G M D C
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYRMVRPDN------C 241
Query: 666 APEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
E+ + + LC +E+ DRP + S+L
Sbjct: 242 PEELYQLMR---LCWKERPEDRPTFDYLRSVL 270
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G FG V+ G ++AVK L + S + F E L+ QLQH+ LV +
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E +I EY+ N SL V L +K ++ IA G+ ++ + + IH
Sbjct: 79 TQEP-IYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 133
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFST 605
RDL+A+N+L+ ++ KI+DFG+AR+ + E T R + + APE G F+
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDN---EXTAREGAKFPIKWTAPEAINYGTFTI 190
Query: 606 KSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCC 665
KSDV+SFG+LL EI+ R + NL + G M D C
Sbjct: 191 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYRMVRPDN------C 236
Query: 666 APEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
E+ + + LC +E+ DRP + S+L
Sbjct: 237 PEELYQLMR---LCWKERPEDRPTFDYLRSVL 265
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R ++ + I+ + YL +
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 191
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 192 NKFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER----- 238
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 239 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 267
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G FG V+ G ++AVK L + S + F E L+ QLQH+ LV +
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E +I EY+ N SL V L +K ++ IA G+ ++ + + IH
Sbjct: 83 TQEP-IYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 137
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFST 605
RDL+A+N+L+ ++ KI+DFG+AR+ + E T R + + APE G F+
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDN---EYTAREGAKFPIKWTAPEAINYGTFTI 194
Query: 606 KSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCC 665
KSDV+SFG+LL EI+ R + NL + G M D C
Sbjct: 195 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYRMVRPDN------C 240
Query: 666 APEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
E+ + + LC +E+ DRP + S+L
Sbjct: 241 PEELYQLMR---LCWKERPEDRPTFDYLRSVL 269
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G FG V+ G ++AVK L + S + F E L+ QLQH+ LV +
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E +I EY+ N SL V L +K ++ IA G+ ++ + + IH
Sbjct: 78 TQEP-IYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFST 605
RDL+A+N+L+ ++ KI+DFG+AR+ + E T R + + APE G F+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDN---EYTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 606 KSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCC 665
KSDV+SFG+LL EI+ R + NL + G M D C
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYRMVRPDN------C 235
Query: 666 APEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
E+ + + LC +E+ DRP + S+L
Sbjct: 236 PEELYQLMR---LCWKERPEDRPTFDYLRSVL 264
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R ++ + I+ + YL +
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAY 191
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 192 NKFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER----- 238
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 239 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R ++ + I+ + YL +
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 187 NKFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER----- 233
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 234 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 75
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R ++ + I+ + YL +
Sbjct: 76 VQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKK 134
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 135 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 190
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 191 NKFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER----- 237
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 238 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 266
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R ++ + I+ + YL +
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 187 NKFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER----- 233
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 234 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 262
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LG+G FGSV Y + N G+ +AVK+L S+ + + +F+ EI ++ LQH N+V
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 483 ILGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G C + LI EYLP SL Y+ +R +D K + I +G+ YL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 131
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGD----QIEENTNRVVGTYGYMAPE 596
R IHR+L N+L++ KI DFG+ ++ D +++E + Y APE
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY---APE 188
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
E FS SDV+SFGV+L E+
Sbjct: 189 SLTESKFSVASDVWSFGVVLYELF 212
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 72
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R ++ + I+ + YL +
Sbjct: 73 VQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 132 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAY 187
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 188 NKFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER----- 234
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 235 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 263
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R ++ + I+ + YL +
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 191
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 192 NKFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER----- 238
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 239 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 267
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 128/253 (50%), Gaps = 15/253 (5%)
Query: 378 MDTRTYINAG-QDLYVR-VDAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGF 435
+ T Y AG ++LY + + +D S N E + I ++ + +G G F
Sbjct: 43 LSTSLYKKAGSENLYFQGANTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHF 102
Query: 436 GSVYKGVL--QNGKEI--AVKRLSRSSGQG-IEEFKTEIALIAQLQHRNLVSILGCCIE- 489
G VY G L +GK+I AVK L+R + G + +F TE ++ H N++S+LG C+
Sbjct: 103 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 162
Query: 490 EQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRD 549
E +++ Y+ + L +I +E + F + +A+G+ +L + + +HRD
Sbjct: 163 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL---ASKKFVHRD 217
Query: 550 LKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTKS 607
L A N +LD K++DFG+AR + + N+ +MA E F+TKS
Sbjct: 218 LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS 277
Query: 608 DVYSFGVLLLEII 620
DV+SFGVLL E++
Sbjct: 278 DVWSFGVLLWELM 290
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 73
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R ++ + I+ + YL +
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 133 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 188
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 189 NKFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER----- 235
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 236 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 73
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R ++ + I+ + YL +
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 133 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 188
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 189 NKFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER----- 235
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 236 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 26 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 84
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R ++ + I+ + YL +
Sbjct: 85 VQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKK 143
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 144 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 199
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 200 NKFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER----- 246
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 247 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 275
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 129/271 (47%), Gaps = 28/271 (10%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
+LG G FG V+ G ++AVK L + S + F E L+ QLQH+ LV +
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
+E +I EY+ N SL V L +K ++ IA G+ ++ + + IHR
Sbjct: 74 QEP-IYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 128
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTK 606
DL+A+N+L+ ++ KI+DFG+AR+ + E T R + + APE G F+ K
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDN---EYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 607 SDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCA 666
SDV+SFG+LL EI+ R + NL + G M D C
Sbjct: 186 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYRMVRPDN------CP 231
Query: 667 PEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
E+ + + LC +E+ DRP + S+L
Sbjct: 232 EELYQLMR---LCWKERPEDRPTFDYLRSVL 259
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 7/199 (3%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G FG VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R + + I+ + YL +
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 129 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAY 184
Query: 601 GLFSTKSDVYSFGVLLLEI 619
FS KSDV++FGVLL EI
Sbjct: 185 NKFSIKSDVWAFGVLLWEI 203
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 76
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R + + I+ + YL +
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKK 135
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 191
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 192 NKFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER----- 238
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 239 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 267
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R + + I+ + YL +
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 187 NKFSIKSDVWAFGVLLWEI------ATYGMSPYPGI--DLSQVYELLEKDYRMER----- 233
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 234 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R + + I+ + YL +
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 187 NKFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER----- 233
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 234 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R + + I+ + YL +
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 187 NKFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER----- 233
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 234 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R + + I+ + YL +
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 187 NKFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER----- 233
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 234 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 262
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 40/293 (13%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLSRSSGQG-------IEEFKTEIAL 471
A N+ + ++G+GGFG V+KG L K +A+K L +G +EF+ E+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 472 IAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIA 531
++ L H N+V + G ++ E++P L + D+A + WS + ++ IA
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIA 132
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLL-----DAAMNPKISDFGMARIFGGDQIEENTNRV 586
GI Y+ Q+ I+HRDL++ N+ L +A + K++DFG+++ Q + + +
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGL 186
Query: 587 VGTYGYMAPEY--AMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVW 644
+G + +MAPE A E ++ K+D YSF ++L I+ G F E G + +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE--GPFD-EYSYGKIKFINMIR 243
Query: 645 DLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
+ E + ++ E C P + I LC RP+ S +V L
Sbjct: 244 E--------EGLRPTIPED-CPPRLRNVIE---LCWSGDPKKRPHFSYIVKEL 284
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 7/199 (3%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R + + I+ + YL +
Sbjct: 70 VQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 129 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAY 184
Query: 601 GLFSTKSDVYSFGVLLLEI 619
FS KSDV++FGVLL EI
Sbjct: 185 NKFSIKSDVWAFGVLLWEI 203
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 72
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R ++ + I+ + YL +
Sbjct: 73 VQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + APE
Sbjct: 132 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAY 187
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 188 NKFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER----- 234
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 235 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 24/273 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 73
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R ++ + I+ + YL +
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + APE
Sbjct: 133 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAY 188
Query: 601 GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 189 NKFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER----- 235
Query: 661 GESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 236 PEGC--PE--KVYELMRACWQWNPSDRPSFAEI 264
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 132/272 (48%), Gaps = 24/272 (8%)
Query: 423 DFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NLV
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 318
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+LG C E +I E++ +L Y+ E R ++ + I+ + YL + +
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKN 377
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IHR+L A N L+ K++DFG++R+ GD + + APE
Sbjct: 378 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 433
Query: 602 LFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLG 661
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 434 KFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER-----P 480
Query: 662 ESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 481 EGC--PE--KVYELMRACWQWNPSDRPSFAEI 508
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 7/199 (3%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 69
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V +LG C E +I E++ +L Y+ E R + + I+ + YL +
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ IHRDL A N L+ K++DFG++R+ GD + + APE
Sbjct: 129 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI-KWTAPESLAY 184
Query: 601 GLFSTKSDVYSFGVLLLEI 619
FS KSDV++FGVLL EI
Sbjct: 185 NKFSIKSDVWAFGVLLWEI 203
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 132/272 (48%), Gaps = 24/272 (8%)
Query: 423 DFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NLV
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 276
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+LG C E +I E++ +L Y+ E R ++ + I+ + YL + +
Sbjct: 277 QLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKN 335
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IHR+L A N L+ K++DFG++R+ GD + + APE
Sbjct: 336 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 391
Query: 602 LFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLG 661
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 392 KFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER-----P 438
Query: 662 ESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 439 EGC--PE--KVYELMRACWQWNPSDRPSFAEI 466
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 131/272 (48%), Gaps = 24/272 (8%)
Query: 423 DFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
D + +KLG G +G VY+GV + +AVK L + + +EEF E A++ +++H NLV
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 279
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+LG C E +I E++ +L Y+ E R + + I+ + YL + +
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKN 338
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IHR+L A N L+ K++DFG++R+ GD + + APE
Sbjct: 339 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 394
Query: 602 LFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLG 661
FS KSDV++FGVLL EI T+ + G + V++L ++ ME
Sbjct: 395 KFSIKSDVWAFGVLLWEIA------TYGMSPYPGI--DLSQVYELLEKDYRMER-----P 441
Query: 662 ESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
E C PE + L C Q +DRP+ + +
Sbjct: 442 EGC--PE--KVYELMRACWQWNPSDRPSFAEI 469
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 105/197 (53%), Gaps = 13/197 (6%)
Query: 427 DNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGC 486
+ KLG G FG V+ ++AVK + S +E F E ++ LQH LV L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVK-LHA 77
Query: 487 CIEEQEKMLIYEYLPNKSL-DVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
+ ++ +I E++ SL D DE + L K + IA G+ ++ Q +
Sbjct: 78 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRN---Y 132
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLF 603
IHRDL+A+N+L+ A++ KI+DFG+AR+ + E T R + + APE G F
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDN---EYTAREGAKFPIKWTAPEAINFGSF 189
Query: 604 STKSDVYSFGVLLLEII 620
+ KSDV+SFG+LL+EI+
Sbjct: 190 TIKSDVWSFGILLMEIV 206
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 107/199 (53%), Gaps = 17/199 (8%)
Query: 427 DNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGC 486
+ KLG G FG V+ ++AVK + S +E F E ++ LQH LV L
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVK-LHA 250
Query: 487 CIEEQEKMLIYEYLPNKSL-DVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
+ ++ +I E++ SL D DE + L K + IA G+ ++ Q +
Sbjct: 251 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRN---Y 305
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN--TNRVVGTY--GYMAPEYAMEG 601
IHRDL+A+N+L+ A++ KI+DFG+AR+ IE+N T R + + APE G
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARV-----IEDNEYTAREGAKFPIKWTAPEAINFG 360
Query: 602 LFSTKSDVYSFGVLLLEII 620
F+ KSDV+SFG+LL+EI+
Sbjct: 361 SFTIKSDVWSFGILLMEIV 379
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 40/293 (13%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLSRSSGQG-------IEEFKTEIAL 471
A N+ + ++G+GGFG V+KG L K +A+K L +G +EF+ E+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 472 IAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIA 531
++ L H N+V + G ++ E++P L + D+A + WS + ++ IA
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIA 132
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLL-----DAAMNPKISDFGMARIFGGDQIEENTNRV 586
GI Y+ Q+ I+HRDL++ N+ L +A + K++DFG ++ Q + + +
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGL 186
Query: 587 VGTYGYMAPEY--AMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVW 644
+G + +MAPE A E ++ K+D YSF ++L I+ G F E G + +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE--GPFD-EYSYGKIKFINMIR 243
Query: 645 DLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
+ E + ++ E C P + I LC RP+ S +V L
Sbjct: 244 E--------EGLRPTIPED-CPPRLRNVIE---LCWSGDPKKRPHFSYIVKEL 284
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 129/271 (47%), Gaps = 28/271 (10%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
+LG G FG V+ G ++AVK L + S + F E L+ QLQH+ LV +
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
+E +I EY+ N SL V L +K ++ IA G+ ++ + + IHR
Sbjct: 75 QEP-IYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 129
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTK 606
+L+A+N+L+ ++ KI+DFG+AR+ + E T R + + APE G F+ K
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDN---EYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 607 SDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCA 666
SDV+SFG+LL EI+ R + NL + G M D C
Sbjct: 187 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYRMVRPDN------CP 232
Query: 667 PEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
E+ + + LC +E+ DRP + S+L
Sbjct: 233 EELYQLMR---LCWKERPEDRPTFDYLRSVL 260
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 111/199 (55%), Gaps = 11/199 (5%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLS-RSSGQGIEEFKT-EIALIAQLQHRNLVSILG 485
K+GEG +G VYK G+ +A+KR+ + +GI EI+L+ +L H N+VS++
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
E+ L++E++ K L + DE K L D + + + RG+ + HQ RI
Sbjct: 87 VIHSERCLTLVFEFM-EKDLK-KVLDENKTGLQDSQIKI-YLYQLLRGVAHCHQH---RI 140
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM-EGLFS 604
+HRDLK N+L+++ K++DFG+AR F G + T+ VV T Y AP+ M +S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 605 TKSDVYSFGVLLLEIILGR 623
T D++S G + E+I G+
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV + +
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVV 331
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ SL ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 387
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN--TNRVVGTY--GYMAPEYAMEGLFS 604
DL+A+N+L+ + K++DFG+AR+ IE+N T R + + APE A+ G F+
Sbjct: 388 DLRAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRFT 442
Query: 605 TKSDVYSFGVLLLEIILGRR 624
KSDV+SFG+LL E+ R
Sbjct: 443 IKSDVWSFGILLTELTTKGR 462
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 111/199 (55%), Gaps = 11/199 (5%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLS-RSSGQGIEEFKT-EIALIAQLQHRNLVSILG 485
K+GEG +G VYK G+ +A+KR+ + +GI EI+L+ +L H N+VS++
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
E+ L++E++ K L + DE K L D + + + RG+ + HQ RI
Sbjct: 87 VIHSERCLTLVFEFM-EKDLK-KVLDENKTGLQDSQIKI-YLYQLLRGVAHCHQH---RI 140
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM-EGLFS 604
+HRDLK N+L+++ K++DFG+AR F G + T+ VV T Y AP+ M +S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 605 TKSDVYSFGVLLLEIILGR 623
T D++S G + E+I G+
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 7/193 (3%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG V+ G N ++A+K + R E+F E ++ +L H LV + G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E+ L++E++ + L Y+ +R L + + G+ YL + S +IH
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VIH 126
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKS 607
RDL A N L+ K+SDFGM R DQ +T + +PE +S+KS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKS 185
Query: 608 DVYSFGVLLLEII 620
DV+SFGVL+ E+
Sbjct: 186 DVWSFGVLMWEVF 198
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 128/272 (47%), Gaps = 28/272 (10%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G G V+ G ++AVK L + S + F E L+ QLQH+ LV +
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E +I EY+ N SL V L +K ++ IA G+ ++ + + IH
Sbjct: 78 TQEP-IYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFST 605
RDL+A+N+L+ ++ KI+DFG+AR+ + E T R + + APE G F+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLI---EDAEXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 606 KSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCC 665
KSDV+SFG+LL EI+ R + NL + G M D C
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--------ERGYRMVRPDN------C 235
Query: 666 APEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
E+ + + LC +E+ DRP + S+L
Sbjct: 236 PEELYQLMR---LCWKERPEDRPTFDYLRSVL 264
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 34/285 (11%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV + +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 248
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ SL ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN--TNRVVGTY--GYMAPEYAMEGLFS 604
DL+A+N+L+ + K++DFG+AR+ IE+N T R + + APE A+ G F+
Sbjct: 305 DLRAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 605 TKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESC 664
KSDV+SFG+LL E+ R G N V D + G M
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPY------PGMVN--REVLDQVERGYRMP---------- 401
Query: 665 CAPEILRCIH-LGLLCVQEQATDRPNMSAVVSMLGSDNAPSSPKH 708
C PE +H L C +++ +RP + + L + P++
Sbjct: 402 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQY 446
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)
Query: 390 LYVRVDAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVL--QNGK 447
L++ + +D S N E + I ++ + +G G FG VY G L +GK
Sbjct: 3 LHMGSNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK 62
Query: 448 EI--AVKRLSRSSGQG-IEEFKTEIALIAQLQHRNLVSILGCCIE-EQEKMLIYEYLPNK 503
+I AVK L+R + G + +F TE ++ H N++S+LG C+ E +++ Y+ +
Sbjct: 63 KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG 122
Query: 504 SLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNP 563
L +I +E + F + +A+G+ +L + + +HRDL A N +LD
Sbjct: 123 DLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 177
Query: 564 KISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
K++DFG+AR + + N+ +MA E F+TKSDV+SFGVLL E++
Sbjct: 178 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 236
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 111/213 (52%), Gaps = 17/213 (7%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G FG V+ G ++A+K L + E F E ++ +L+H LV L
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQ-LYAV 72
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ E+ ++ EY+ SL ++ D R+L ++ +A G+ Y+ R+ IH
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFLKDGEGRAL-KLPNLVDMAAQVAAGMAYIE---RMNYIH 128
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFST 605
RDL+++N+L+ + KI+DFG+AR+ + E T R + + APE A+ G F+
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDN---EXTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 606 KSDVYSFGVLLLEIILGRR------NNTFHLEQ 632
KSDV+SFG+LL E++ R NN LEQ
Sbjct: 186 KSDVWSFGILLTELVTKGRVPYPGMNNREVLEQ 218
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 140/293 (47%), Gaps = 40/293 (13%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLSRSSGQG-------IEEFKTEIAL 471
A N+ + ++G+GGFG V+KG L K +A+K L +G +EF+ E+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 472 IAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIA 531
++ L H N+V + G ++ E++P L + D+A + WS + ++ IA
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIA 132
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLL-----DAAMNPKISDFGMARIFGGDQIEENTNRV 586
GI Y+ Q+ I+HRDL++ N+ L +A + K++DF +++ Q + + +
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGL 186
Query: 587 VGTYGYMAPEY--AMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVW 644
+G + +MAPE A E ++ K+D YSF ++L I+ G F E G + +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE--GPFD-EYSYGKIKFINMIR 243
Query: 645 DLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
+ E + ++ E C P + I LC RP+ S +V L
Sbjct: 244 E--------EGLRPTIPED-CPPRLRNVIE---LCWSGDPKKRPHFSYIVKEL 284
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 142/294 (48%), Gaps = 46/294 (15%)
Query: 430 LGEGGFGSVYKGVLQNG---KEIAVKRLSRSSGQGIEE---FKTEIALIAQLQHRNLVSI 483
+G G FG VYKG+L+ KE+ V + +G ++ F E ++ Q H N++ +
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 484 LGCCIEEQEKMLIYEYLPNKSLDVYIFD-EAKRSLLDWSKRFEIICGIARGILYLHQDSR 542
G + + M+I EY+ N +LD ++ + + + S+L + ++ GIA G+ YL +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL---QLVGMLRGIAAGMKYL---AN 165
Query: 543 LRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG---TYGYMAPEYAM 599
+ +HRDL A N+L+++ + K+SDFG++R+ D E T G + APE
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD--PEATYTTSGGKIPIRWTAPEAIS 223
Query: 600 EGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDK 658
F++ SDV+SFG+++ E++ G R W L H V K
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMTYGERP----------YWELSNH------------EVMK 261
Query: 659 SLGESCCAPEILRC----IHLGLLCVQEQATDRPNMSAVVSMLGS-DNAPSSPK 707
++ + P + C L + C Q++ RP + +VS+L AP S K
Sbjct: 262 AINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLK 315
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 123/239 (51%), Gaps = 21/239 (8%)
Query: 394 VDAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVL--QNGKEI-- 449
++ +D S N E + I ++ + +G G FG VY G L +GK+I
Sbjct: 3 LNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHC 62
Query: 450 AVKRLSRSSGQG-IEEFKTEIALIAQLQHRNLVSILGCCIE-EQEKMLIYEYLPNKSLDV 507
AVK L+R + G + +F TE ++ H N++S+LG C+ E +++ Y+ + L
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 508 YIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISD 567
+I +E + F + +A+G+ +L + + +HRDL A N +LD K++D
Sbjct: 123 FIRNETHNPTVKDLIGFGL--QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 568 FGMARIFGGDQIEENTNRVVGTYGYMAPE--YAMEGL----FSTKSDVYSFGVLLLEII 620
FG+AR D +++ + V G P A+E L F+TKSDV+SFGVLL E++
Sbjct: 178 FGLAR----DMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 19/195 (9%)
Query: 427 DNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGC 486
+ KLG G FG V+ ++AVK + S +E F E ++ LQH LV L
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVK-LHA 244
Query: 487 CIEEQEKMLIYEYLPNKSL-DVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
+ ++ +I E++ SL D DE + L K + IA G+ ++ Q +
Sbjct: 245 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRN---Y 299
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFST 605
IHRDL+A+N+L+ A++ KI+DFG+AR+ I+ + APE G F+
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGAKFPIK-----------WTAPEAINFGSFTI 348
Query: 606 KSDVYSFGVLLLEII 620
KSDV+SFG+LL+EI+
Sbjct: 349 KSDVWSFGILLMEIV 363
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 132/283 (46%), Gaps = 30/283 (10%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV + +
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 72
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ SL ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 128
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTK 606
DL+A+N+L+ + K++DFG+AR+ + E T R + + APE A+ G F+ K
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDN---EXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 607 SDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCA 666
SDV+SFG+LL E+ R G N V D + G M C
Sbjct: 186 SDVWSFGILLTELTTKGRVPY------PGMVN--REVLDQVERGYRMP----------CP 227
Query: 667 PEILRCIH-LGLLCVQEQATDRPNMSAVVSMLGSDNAPSSPKH 708
PE +H L C +++ +RP + + L + P++
Sbjct: 228 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQY 270
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 106/195 (54%), Gaps = 15/195 (7%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV + +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 248
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ SL ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN--TNRVVGTY--GYMAPEYAMEGLFS 604
DL+A+N+L+ + K++DFG+AR+ IE+N T R + + APE A+ G F+
Sbjct: 305 DLRAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 605 TKSDVYSFGVLLLEI 619
KSDV+SFG+LL E+
Sbjct: 360 IKSDVWSFGILLTEL 374
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 119/235 (50%), Gaps = 13/235 (5%)
Query: 394 VDAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVL--QNGKEI-- 449
++ +D S N E + I ++ + +G G FG VY G L +GK+I
Sbjct: 3 LNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHC 62
Query: 450 AVKRLSRSSGQG-IEEFKTEIALIAQLQHRNLVSILGCCIE-EQEKMLIYEYLPNKSLDV 507
AVK L+R + G + +F TE ++ H N++S+LG C+ E +++ Y+ + L
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 508 YIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISD 567
+I +E + F + +A+G+ +L + + +HRDL A N +LD K++D
Sbjct: 123 FIRNETHNPTVKDLIGFGL--QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 568 FGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
FG+AR + + N+ +MA E F+TKSDV+SFGVLL E++
Sbjct: 178 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 118/234 (50%), Gaps = 13/234 (5%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVL--QNGKEI--A 450
+ +D S N E + I ++ + +G G FG VY G L +GK+I A
Sbjct: 3 NTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA 62
Query: 451 VKRLSRSSGQG-IEEFKTEIALIAQLQHRNLVSILGCCIE-EQEKMLIYEYLPNKSLDVY 508
VK L+R + G + +F TE ++ H N++S+LG C+ E +++ Y+ + L +
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 122
Query: 509 IFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDF 568
I +E + F + +A+G+ +L + + +HRDL A N +LD K++DF
Sbjct: 123 IRNETHNPTVKDLIGFGL--QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADF 177
Query: 569 GMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
G+AR + + N+ +MA E F+TKSDV+SFGVLL E++
Sbjct: 178 GLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 118/234 (50%), Gaps = 13/234 (5%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVL--QNGKEI--A 450
+ +D S N E + I ++ + +G G FG VY G L +GK+I A
Sbjct: 1 NTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA 60
Query: 451 VKRLSRSSGQG-IEEFKTEIALIAQLQHRNLVSILGCCIE-EQEKMLIYEYLPNKSLDVY 508
VK L+R + G + +F TE ++ H N++S+LG C+ E +++ Y+ + L +
Sbjct: 61 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 120
Query: 509 IFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDF 568
I +E + F + +A+G+ +L + + +HRDL A N +LD K++DF
Sbjct: 121 IRNETHNPTVKDLIGFGL--QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADF 175
Query: 569 GMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
G+AR + + N+ +MA E F+TKSDV+SFGVLL E++
Sbjct: 176 GLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 13/234 (5%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVL--QNGKEI--A 450
+ +D S N E + I ++ + +G G FG VY G L +GK+I A
Sbjct: 2 NTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA 61
Query: 451 VKRLSRSSGQG-IEEFKTEIALIAQLQHRNLVSILGCCIE-EQEKMLIYEYLPNKSLDVY 508
VK L+R + G + +F TE ++ H N++S+LG C+ E +++ Y+ + L +
Sbjct: 62 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 121
Query: 509 IFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDF 568
I +E + F + +A+G+ YL + + +HRDL A N +LD K++DF
Sbjct: 122 IRNETHNPTVKDLIGFGL--QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADF 176
Query: 569 GMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
G+AR + N+ +MA E F+TKSDV+SFGVLL E++
Sbjct: 177 GLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 429 KLGEGGFGSVYKGVL------QNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LGEG FG V+ Q+ +AVK L +S ++F+ E L+ LQH+++V
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIF------------DEAKRSLLDWSKRFEIICGI 530
G C E + ++++EY+ + L+ ++ ++ L + + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
A G++YL + L +HRDL N L+ + KI DFGM+R R +
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+M PE + F+T+SDV+SFGV+L EI
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIF 225
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 429 KLGEGGFGSVYKGVL------QNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LGEG FG V+ Q+ +AVK L +S ++F+ E L+ LQH+++V
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIF------------DEAKRSLLDWSKRFEIICGI 530
G C E + ++++EY+ + L+ ++ ++ L + + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
A G++YL + L +HRDL N L+ + KI DFGM+R R +
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+M PE + F+T+SDV+SFGV+L EI
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIF 231
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 132/283 (46%), Gaps = 30/283 (10%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV + +
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 75
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ SL ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 131
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTK 606
DL+A+N+L+ + K++DFG+AR+ + E T R + + APE A+ G F+ K
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 607 SDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCA 666
SDV+SFG+LL E+ R G N V D + G M C
Sbjct: 189 SDVWSFGILLTELTTKGRVPY------PGMVN--REVLDQVERGYRMP----------CP 230
Query: 667 PEILRCIH-LGLLCVQEQATDRPNMSAVVSMLGSDNAPSSPKH 708
PE +H L C +++ +RP + + L + P++
Sbjct: 231 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQY 273
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 429 KLGEGGFGSVYKGVL------QNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LGEG FG V+ Q+ +AVK L +S ++F+ E L+ LQH+++V
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIF------------DEAKRSLLDWSKRFEIICGI 530
G C E + ++++EY+ + L+ ++ ++ L + + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
A G++YL + L +HRDL N L+ + KI DFGM+R R +
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+M PE + F+T+SDV+SFGV+L EI
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIF 254
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 7/193 (3%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG V+ G N ++A+K + R E+F E ++ +L H LV + G C
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E+ L++E++ + L Y+ +R L + + G+ YL + +IH
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKS 607
RDL A N L+ K+SDFGM R DQ +T + +PE +S+KS
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKS 188
Query: 608 DVYSFGVLLLEII 620
DV+SFGVL+ E+
Sbjct: 189 DVWSFGVLMWEVF 201
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 13/233 (5%)
Query: 396 AAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVL--QNGKEI--AV 451
+D S N E + I ++ + +G G FG VY G L +GK+I AV
Sbjct: 4 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 63
Query: 452 KRLSRSSGQG-IEEFKTEIALIAQLQHRNLVSILGCCIE-EQEKMLIYEYLPNKSLDVYI 509
K L+R + G + +F TE ++ H N++S+LG C+ E +++ Y+ + L +I
Sbjct: 64 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 123
Query: 510 FDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFG 569
+E + F + +A+G+ +L + + +HRDL A N +LD K++DFG
Sbjct: 124 RNETHNPTVKDLIGFGL--QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 178
Query: 570 MARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+AR + + N+ +MA E F+TKSDV+SFGVLL E++
Sbjct: 179 LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 106/195 (54%), Gaps = 15/195 (7%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV + +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 248
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ SL ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN--TNRVVGTY--GYMAPEYAMEGLFS 604
DL+A+N+L+ + K++DFG+AR+ IE+N T R + + APE A+ G F+
Sbjct: 305 DLRAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 605 TKSDVYSFGVLLLEI 619
KSDV+SFG+LL E+
Sbjct: 360 IKSDVWSFGILLTEL 374
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 7/193 (3%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG V+ G N ++A+K + R E+F E ++ +L H LV + G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E+ L++E++ + L Y+ +R L + + G+ YL + +IH
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKS 607
RDL A N L+ K+SDFGM R DQ +T + +PE +S+KS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKS 185
Query: 608 DVYSFGVLLLEII 620
DV+SFGVL+ E+
Sbjct: 186 DVWSFGVLMWEVF 198
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 7/193 (3%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG V+ G N ++A+K + R E+F E ++ +L H LV + G C
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E+ L++E++ + L Y+ +R L + + G+ YL + +IH
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKS 607
RDL A N L+ K+SDFGM R DQ +T + +PE +S+KS
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKS 183
Query: 608 DVYSFGVLLLEII 620
DV+SFGVL+ E+
Sbjct: 184 DVWSFGVLMWEVF 196
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 104/193 (53%), Gaps = 11/193 (5%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 82
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ SL ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTK 606
DL+A+N+L+ + K++DFG+AR+ + E T R + + APE A+ G F+ K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDN---EXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 607 SDVYSFGVLLLEI 619
SDV+SFG+LL E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 13/234 (5%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVL--QNGKEI--A 450
+ +D S N E + I ++ + +G G FG VY G L +GK+I A
Sbjct: 3 NTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA 62
Query: 451 VKRLSRSSGQG-IEEFKTEIALIAQLQHRNLVSILGCCIE-EQEKMLIYEYLPNKSLDVY 508
VK L+R + G + +F TE ++ H N++S+LG C+ E +++ Y+ + L +
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 122
Query: 509 IFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDF 568
I +E + F + +A+G+ YL + + +HRDL A N +LD K++DF
Sbjct: 123 IRNETHNPTVKDLIGFGL--QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADF 177
Query: 569 GMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
G+AR + N+ +MA E F+TKSDV+SFGVLL E++
Sbjct: 178 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 13/234 (5%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVL--QNGKEI--A 450
+ +D S N E + I ++ + +G G FG VY G L +GK+I A
Sbjct: 22 NTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA 81
Query: 451 VKRLSRSSGQG-IEEFKTEIALIAQLQHRNLVSILGCCIE-EQEKMLIYEYLPNKSLDVY 508
VK L+R + G + +F TE ++ H N++S+LG C+ E +++ Y+ + L +
Sbjct: 82 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 141
Query: 509 IFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDF 568
I +E + F + +A+G+ YL + + +HRDL A N +LD K++DF
Sbjct: 142 IRNETHNPTVKDLIGFGL--QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADF 196
Query: 569 GMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
G+AR + N+ +MA E F+TKSDV+SFGVLL E++
Sbjct: 197 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 250
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 13/234 (5%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVL--QNGKEI--A 450
+ +D S N E + I ++ + +G G FG VY G L +GK+I A
Sbjct: 3 NTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA 62
Query: 451 VKRLSRSSGQG-IEEFKTEIALIAQLQHRNLVSILGCCIE-EQEKMLIYEYLPNKSLDVY 508
VK L+R + G + +F TE ++ H N++S+LG C+ E +++ Y+ + L +
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 122
Query: 509 IFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDF 568
I +E + F + +A+G+ YL + + +HRDL A N +LD K++DF
Sbjct: 123 IRNETHNPTVKDLIGFGL--QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADF 177
Query: 569 GMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
G+AR + N+ +MA E F+TKSDV+SFGVLL E++
Sbjct: 178 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 13/234 (5%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVL--QNGKEI--A 450
+ +D S N E + I ++ + +G G FG VY G L +GK+I A
Sbjct: 2 NTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA 61
Query: 451 VKRLSRSSGQG-IEEFKTEIALIAQLQHRNLVSILGCCIE-EQEKMLIYEYLPNKSLDVY 508
VK L+R + G + +F TE ++ H N++S+LG C+ E +++ Y+ + L +
Sbjct: 62 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 121
Query: 509 IFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDF 568
I +E + F + +A+G+ YL + + +HRDL A N +LD K++DF
Sbjct: 122 IRNETHNPTVKDLIGFGL--QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADF 176
Query: 569 GMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
G+AR + N+ +MA E F+TKSDV+SFGVLL E++
Sbjct: 177 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 13/234 (5%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVL--QNGKEI--A 450
+ +D S N E + I ++ + +G G FG VY G L +GK+I A
Sbjct: 21 NTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCA 80
Query: 451 VKRLSRSSGQG-IEEFKTEIALIAQLQHRNLVSILGCCIE-EQEKMLIYEYLPNKSLDVY 508
VK L+R + G + +F TE ++ H N++S+LG C+ E +++ Y+ + L +
Sbjct: 81 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 140
Query: 509 IFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDF 568
I +E + F + +A+G+ YL + + +HRDL A N +LD K++DF
Sbjct: 141 IRNETHNPTVKDLIGFGL--QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADF 195
Query: 569 GMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
G+AR + N+ +MA E F+TKSDV+SFGVLL E++
Sbjct: 196 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 249
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 117/233 (50%), Gaps = 13/233 (5%)
Query: 396 AAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVL--QNGKEI--AV 451
+ +D S N E + I ++ + +G G FG VY G L +GK+I AV
Sbjct: 2 SVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 61
Query: 452 KRLSRSSGQG-IEEFKTEIALIAQLQHRNLVSILGCCIE-EQEKMLIYEYLPNKSLDVYI 509
K L+R + G + +F TE ++ H N++S+LG C+ E +++ Y+ + L +I
Sbjct: 62 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 121
Query: 510 FDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFG 569
+E + F + +A+G+ YL + + +HRDL A N +LD K++DFG
Sbjct: 122 RNETHNPTVKDLIGFGL--QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 176
Query: 570 MARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+AR + N+ +MA E F+TKSDV+SFGVLL E++
Sbjct: 177 LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 104/193 (53%), Gaps = 11/193 (5%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ SL ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTK 606
DL+A+N+L+ + K++DFG+AR+ + E T R + + APE A+ G F+ K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 607 SDVYSFGVLLLEI 619
SDV+SFG+LL E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 104/193 (53%), Gaps = 11/193 (5%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV + +
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 71
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ SL ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 127
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTK 606
DL+A+N+L+ + K++DFG+AR+ + E T R + + APE A+ G F+ K
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 607 SDVYSFGVLLLEI 619
SDV+SFG+LL E+
Sbjct: 185 SDVWSFGILLTEL 197
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 34/285 (11%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV + +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 79
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ SL ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGK-YLRLPQLVDMSAQIASGMAYVE---RMNYVHR 135
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN--TNRVVGTY--GYMAPEYAMEGLFS 604
DL+A+N+L+ + K++DFG+AR+ IE+N T R + + APE A+ G F+
Sbjct: 136 DLRAANILVGENLVCKVADFGLARL-----IEDNEWTARQGAKFPIKWTAPEAALYGRFT 190
Query: 605 TKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESC 664
KSDV+SFG+LL E+ R G N V D + G M
Sbjct: 191 IKSDVWSFGILLTELTTKGRVPY------PGMVN--REVLDQVERGYRMP---------- 232
Query: 665 CAPEILRCIH-LGLLCVQEQATDRPNMSAVVSMLGSDNAPSSPKH 708
C PE +H L C +++ +RP + + L + P++
Sbjct: 233 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQY 277
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 104/193 (53%), Gaps = 11/193 (5%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ SL ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTK 606
DL+A+N+L+ + K++DFG+AR+ + E T R + + APE A+ G F+ K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 607 SDVYSFGVLLLEI 619
SDV+SFG+LL E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 104/193 (53%), Gaps = 11/193 (5%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV + +
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 73
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ SL ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 129
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTK 606
DL+A+N+L+ + K++DFG+AR+ + E T R + + APE A+ G F+ K
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 607 SDVYSFGVLLLEI 619
SDV+SFG+LL E+
Sbjct: 187 SDVWSFGILLTEL 199
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 132/283 (46%), Gaps = 30/283 (10%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV + +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 79
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ SL ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGK-YLRLPQLVDMSAQIASGMAYVE---RMNYVHR 135
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTK 606
DL+A+N+L+ + K++DFG+AR+ + E T R + + APE A+ G F+ K
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 607 SDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCA 666
SDV+SFG+LL E+ R G N V D + G M C
Sbjct: 193 SDVWSFGILLTELTTKGRVPY------PGMVN--REVLDQVERGYRMP----------CP 234
Query: 667 PEILRCIH-LGLLCVQEQATDRPNMSAVVSMLGSDNAPSSPKH 708
PE +H L C +++ +RP + + L + P++
Sbjct: 235 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQY 277
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 105/195 (53%), Gaps = 15/195 (7%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV + +
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 249
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ SL ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 305
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN--TNRVVGTY--GYMAPEYAMEGLFS 604
DL+A+N+L+ + K++DFG+ R+ IE+N T R + + APE A+ G F+
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRL-----IEDNEYTARQGAKFPIKWTAPEAALYGRFT 360
Query: 605 TKSDVYSFGVLLLEI 619
KSDV+SFG+LL E+
Sbjct: 361 IKSDVWSFGILLTEL 375
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 104/193 (53%), Gaps = 11/193 (5%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ SL ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTK 606
DL+A+N+L+ + K++DFG+AR+ + E T R + + APE A+ G F+ K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 607 SDVYSFGVLLLEI 619
SDV+SFG+LL E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 13/232 (5%)
Query: 397 AELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVL--QNGKEI--AVK 452
+D S N E + I ++ + +G G FG VY G L +GK+I AVK
Sbjct: 2 VHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVK 61
Query: 453 RLSRSSGQG-IEEFKTEIALIAQLQHRNLVSILGCCIE-EQEKMLIYEYLPNKSLDVYIF 510
L+R + G + +F TE ++ H N++S+LG C+ E +++ Y+ + L +I
Sbjct: 62 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR 121
Query: 511 DEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGM 570
+E + F + +A+G+ YL + + +HRDL A N +LD K++DFG+
Sbjct: 122 NETHNPTVKDLIGFGL--QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 176
Query: 571 ARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
AR + N+ +MA E F+TKSDV+SFGVLL E++
Sbjct: 177 ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 228
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 108/201 (53%), Gaps = 13/201 (6%)
Query: 428 NKLGEGGFGSVY--KGVLQNGKEIAVKRL---SRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+KLG GG +VY + + N K +A+K + R + ++ F+ E+ +QL H+N+VS
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSR 542
++ E+ L+ EY+ +L YI S+ D + F I GI + H
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSV-DTAINF--TNQILDGIKHAHD--- 129
Query: 543 LRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGL 602
+RI+HRD+K N+L+D+ KI DFG+A+ + + TN V+GT Y +PE A
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQAKGEA 188
Query: 603 FSTKSDVYSFGVLLLEIILGR 623
+D+YS G++L E+++G
Sbjct: 189 TDECTDIYSIGIVLYEMLVGE 209
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 13/231 (5%)
Query: 398 ELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVL--QNGKEI--AVKR 453
+D S N E + I ++ + +G G FG VY G L +GK+I AVK
Sbjct: 1 HIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS 60
Query: 454 LSRSSGQG-IEEFKTEIALIAQLQHRNLVSILGCCIE-EQEKMLIYEYLPNKSLDVYIFD 511
L+R + G + +F TE ++ H N++S+LG C+ E +++ Y+ + L +I +
Sbjct: 61 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN 120
Query: 512 EAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMA 571
E + F + +A+G+ YL + + +HRDL A N +LD K++DFG+A
Sbjct: 121 ETHNPTVKDLIGFGL--QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA 175
Query: 572 RIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
R + N+ +MA E F+TKSDV+SFGVLL E++
Sbjct: 176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 226
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 148/310 (47%), Gaps = 47/310 (15%)
Query: 400 DDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQ--NGKEIAVKRLSRS 457
D ++ E+ D +NI S D +G G FG V G L+ + KEI+V +
Sbjct: 30 DPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 458 SG---QGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFD-EA 513
G + +F E +++ Q H N++ + G + + M++ EY+ N SLD ++ +A
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
Query: 514 KRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARI 573
+ +++ + ++ GIA G+ YL S + +HRDL A N+L+++ + K+SDFG+AR+
Sbjct: 143 QFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARV 196
Query: 574 FGGDQIEENTNRVVGT-YGYMAPEYAMEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLE 631
D T R + +PE F++ SDV+S+G++L E++ G R
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP------ 250
Query: 632 QGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRC----IHLGLLCVQEQATDR 687
W++ + + V K++ E P + C L L C Q+ +R
Sbjct: 251 -----------YWEM-----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNR 294
Query: 688 PNMSAVVSML 697
P +VS+L
Sbjct: 295 PKFEQIVSIL 304
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 17/203 (8%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG+VYKG + + ++ + Q ++ FK E+ ++ + +H N++ +G
Sbjct: 18 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ Q ++ ++ SL Y A + + K +I ARG+ YLH S IIH
Sbjct: 78 TKPQ-LAIVTQWCEGSSL--YHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIH 131
Query: 548 RDLKASNVLLDAAMNPKISDFGMA----RIFGGDQIEENTNRVVGTYGYMAPEYAM---E 600
RDLK++N+ L KI DFG+A R G Q E+ + G+ +MAPE
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDS 187
Query: 601 GLFSTKSDVYSFGVLLLEIILGR 623
+S +SDVY+FG++L E++ G+
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG V+ G N ++A+K + R E+F E ++ +L H LV + G C
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E+ L+ E++ + L Y+ +R L + + G+ YL + +IH
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKS 607
RDL A N L+ K+SDFGM R DQ +T + +PE +S+KS
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKS 186
Query: 608 DVYSFGVLLLEII 620
DV+SFGVL+ E+
Sbjct: 187 DVWSFGVLMWEVF 199
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 104/193 (53%), Gaps = 11/193 (5%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +++H LV + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAV-V 82
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ SL ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTK 606
DL+A+N+L+ + K++DFG+AR+ + E T R + + APE A+ G F+ K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 607 SDVYSFGVLLLEI 619
SDV+SFG+LL E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 17/203 (8%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG+VYKG + + ++ + Q ++ FK E+ ++ + +H N++ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ Q ++ ++ SL Y A + + K +I ARG+ YLH S IIH
Sbjct: 90 TKPQ-LAIVTQWCEGSSL--YHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIH 143
Query: 548 RDLKASNVLLDAAMNPKISDFGMA----RIFGGDQIEENTNRVVGTYGYMAPEYAM---E 600
RDLK++N+ L KI DFG+A R G Q E+ + G+ +MAPE
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDS 199
Query: 601 GLFSTKSDVYSFGVLLLEIILGR 623
+S +SDVY+FG++L E++ G+
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 11/193 (5%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ SL ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTK 606
DL A+N+L+ + K++DFG+AR+ + E T R + + APE A+ G F+ K
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 607 SDVYSFGVLLLEI 619
SDV+SFG+LL E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 136/279 (48%), Gaps = 38/279 (13%)
Query: 430 LGEGGFGSVYKGVLQ--NGKEIAVKRLSRSSG---QGIEEFKTEIALIAQLQHRNLVSIL 484
+G G FG V G L+ +EI V + +G + +F +E +++ Q H N++ +
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
G + + M+I EY+ N SLD ++ R + + ++ GI G+ YL S +
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYL---SDMS 151
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGT-YGYMAPEYAMEGLF 603
+HRDL A N+L+++ + K+SDFGM+R+ D T R + APE F
Sbjct: 152 AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
Query: 604 STKSDVYSFGVLLLEII-LGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGE 662
++ SDV+S+G+++ E++ G R WD+ + + V K++ E
Sbjct: 212 TSASDVWSYGIVMWEVMSYGER-----------------PYWDM-----SNQDVIKAIEE 249
Query: 663 SCCAPEILRC---IH-LGLLCVQEQATDRPNMSAVVSML 697
P + C +H L L C Q++ +DRP +V+ML
Sbjct: 250 GYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 288
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 13/199 (6%)
Query: 430 LGEGGFGSVYKGVL--QNGKEI--AVKRLSRSSGQG-IEEFKTEIALIAQLQHRNLVSIL 484
+G G FG VY G L +GK+I AVK L+R + G + +F TE ++ H N++S+L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 485 GCCIE-EQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRL 543
G C+ E +++ Y+ + L +I +E + F + +A+G+ YL +
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 144
Query: 544 RIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEG 601
+ +HRDL A N +LD K++DFG+AR + N+ +MA E
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 204
Query: 602 LFSTKSDVYSFGVLLLEII 620
F+TKSDV+SFGVLL E++
Sbjct: 205 KFTTKSDVWSFGVLLWELM 223
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 148/310 (47%), Gaps = 47/310 (15%)
Query: 400 DDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQ--NGKEIAVKRLSRS 457
D ++ E+ D +NI S D +G G FG V G L+ + KEI+V +
Sbjct: 30 DPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 458 SG---QGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFD-EA 513
G + +F E +++ Q H N++ + G + + M++ EY+ N SLD ++ +A
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
Query: 514 KRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARI 573
+ +++ + ++ GIA G+ YL S + +HRDL A N+L+++ + K+SDFG++R+
Sbjct: 143 QFTVI---QLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 574 FGGDQIEENTNRVVGT-YGYMAPEYAMEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLE 631
D T R + +PE F++ SDV+S+G++L E++ G R
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP------ 250
Query: 632 QGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRC----IHLGLLCVQEQATDR 687
W++ + + V K++ E P + C L L C Q+ +R
Sbjct: 251 -----------YWEM-----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNR 294
Query: 688 PNMSAVVSML 697
P +VS+L
Sbjct: 295 PKFEQIVSIL 304
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 20/223 (8%)
Query: 424 FSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFK---TEIALIAQLQHRN 479
FS ++G G FG+VY ++N + +A+K++S S Q E+++ E+ + +L+H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQ 539
+ GC + E L+ EY + D+ E + L + + G +G+ YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHS 172
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM 599
+ +IHRD+KA N+LL K+ DFG A I N VGT +MAPE +
Sbjct: 173 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA------PANXFVGTPYWMAPEVIL 223
Query: 600 ---EGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNL 639
EG + K DV+S G+ +E+ R+ F++ S +++
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELA-ERKPPLFNMNAMSALYHI 265
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 11/193 (5%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ L ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTK 606
DL+A+N+L+ + K++DFG+AR+ + E T R + + APE A+ G F+ K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 607 SDVYSFGVLLLEI 619
SDV+SFG+LL E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 136/279 (48%), Gaps = 38/279 (13%)
Query: 430 LGEGGFGSVYKGVLQ--NGKEIAVKRLSRSSG---QGIEEFKTEIALIAQLQHRNLVSIL 484
+G G FG V G L+ +EI V + +G + +F +E +++ Q H N++ +
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
G + + M+I EY+ N SLD ++ R + + ++ GI G+ YL S +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYL---SDMS 130
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGT-YGYMAPEYAMEGLF 603
+HRDL A N+L+++ + K+SDFGM+R+ D T R + APE F
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 190
Query: 604 STKSDVYSFGVLLLEII-LGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGE 662
++ SDV+S+G+++ E++ G R WD+ + + V K++ E
Sbjct: 191 TSASDVWSYGIVMWEVMSYGER-----------------PYWDM-----SNQDVIKAIEE 228
Query: 663 SCCAPEILRC---IH-LGLLCVQEQATDRPNMSAVVSML 697
P + C +H L L C Q++ +DRP +V+ML
Sbjct: 229 GYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 267
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 20/223 (8%)
Query: 424 FSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFK---TEIALIAQLQHRN 479
FS ++G G FG+VY ++N + +A+K++S S Q E+++ E+ + +L+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQ 539
+ GC + E L+ EY + D+ E + L + + G +G+ YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHS 133
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM 599
+ +IHRD+KA N+LL K+ DFG A I N VGT +MAPE +
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------ANXFVGTPYWMAPEVIL 184
Query: 600 ---EGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNL 639
EG + K DV+S G+ +E+ R+ F++ S +++
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELA-ERKPPLFNMNAMSALYHI 226
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 11/193 (5%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
KLG+G FG V+ G +A+K L + E F E ++ +L+H LV + +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ ++ EY+ L ++ E + L + ++ IA G+ Y+ R+ +HR
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTK 606
DL+A+N+L+ + K++DFG+AR+ + E T R + + APE A+ G F+ K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 607 SDVYSFGVLLLEI 619
SDV+SFG+LL E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 17/203 (8%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG+VYKG + + ++ + Q ++ FK E+ ++ + +H N++ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
Q ++ ++ SL Y A + + K +I ARG+ YLH S IIH
Sbjct: 90 TAPQ-LAIVTQWCEGSSL--YHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIH 143
Query: 548 RDLKASNVLLDAAMNPKISDFGMA----RIFGGDQIEENTNRVVGTYGYMAPEYAM---E 600
RDLK++N+ L KI DFG+A R G Q E+ + G+ +MAPE
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDS 199
Query: 601 GLFSTKSDVYSFGVLLLEIILGR 623
+S +SDVY+FG++L E++ G+
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 148/310 (47%), Gaps = 47/310 (15%)
Query: 400 DDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQ--NGKEIAVKRLSRS 457
D ++ E+ D +NI S D +G G FG V G L+ + KEI+V +
Sbjct: 28 DPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 80
Query: 458 SG---QGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFD-EA 513
G + +F E +++ Q H N++ + G + + M++ EY+ N SLD ++ +A
Sbjct: 81 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 140
Query: 514 KRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARI 573
+ +++ + ++ GIA G+ YL S + +HRDL A N+L+++ + K+SDFG++R+
Sbjct: 141 QFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 194
Query: 574 FGGDQIEENTNRVVGT-YGYMAPEYAMEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLE 631
D T R + +PE F++ SDV+S+G++L E++ G R
Sbjct: 195 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP------ 248
Query: 632 QGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRC----IHLGLLCVQEQATDR 687
W++ + + V K++ E P + C L L C Q+ +R
Sbjct: 249 -----------YWEM-----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNR 292
Query: 688 PNMSAVVSML 697
P +VS+L
Sbjct: 293 PKFEQIVSIL 302
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 136/279 (48%), Gaps = 38/279 (13%)
Query: 430 LGEGGFGSVYKGVLQ--NGKEIAVKRLSRSSG---QGIEEFKTEIALIAQLQHRNLVSIL 484
+G G FG V G L+ +EI V + +G + +F +E +++ Q H N++ +
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
G + + M+I EY+ N SLD ++ R + + ++ GI G+ YL S +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYL---SDMS 136
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGT-YGYMAPEYAMEGLF 603
+HRDL A N+L+++ + K+SDFGM+R+ D T R + APE F
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 196
Query: 604 STKSDVYSFGVLLLEII-LGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGE 662
++ SDV+S+G+++ E++ G R WD+ + + V K++ E
Sbjct: 197 TSASDVWSYGIVMWEVMSYGER-----------------PYWDM-----SNQDVIKAIEE 234
Query: 663 SCCAPEILRC---IH-LGLLCVQEQATDRPNMSAVVSML 697
P + C +H L L C Q++ +DRP +V+ML
Sbjct: 235 GYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 273
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 7/193 (3%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG V+ G N ++A+K + S ++F E ++ +L H LV + G C
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E+ L++E++ + L Y+ +R L + + G+ YL + +IH
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKS 607
RDL A N L+ K+SDFGM R DQ +T + +PE +S+KS
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSSKS 205
Query: 608 DVYSFGVLLLEII 620
DV+SFGVL+ E+
Sbjct: 206 DVWSFGVLMWEVF 218
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 151/321 (47%), Gaps = 48/321 (14%)
Query: 390 LYVRVDAAELDDSRRN-SEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQ--NG 446
L VD +D + E+ D +NI S D +G G FG V G L+ +
Sbjct: 19 LRTYVDPHTFEDPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 447 KEIAVKRLSRSSG---QGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNK 503
KEI+V + G + +F E +++ Q H N++ + G + + M++ EY+ N
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 504 SLDVYIFD-EAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMN 562
SLD ++ +A+ +++ + ++ GIA G+ YL S + +HRDL A N+L+++ +
Sbjct: 132 SLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLV 185
Query: 563 PKISDFGMARIFGGDQIEENTNRVVGT-YGYMAPEYAMEGLFSTKSDVYSFGVLLLEII- 620
K+SDFG++R+ D T R + +PE F++ SDV+S+G++L E++
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 621 LGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRC----IHLG 676
G R W++ + + V K++ E P + C L
Sbjct: 246 YGERP-----------------YWEM-----SNQDVIKAVDEGYRLPPPMDCPAALYQLM 283
Query: 677 LLCVQEQATDRPNMSAVVSML 697
L C Q+ +RP +VS+L
Sbjct: 284 LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 148/310 (47%), Gaps = 47/310 (15%)
Query: 400 DDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQ--NGKEIAVKRLSRS 457
D ++ E+ D +NI S D +G G FG V G L+ + KEI+V +
Sbjct: 30 DPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 458 SG---QGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFD-EA 513
G + +F E +++ Q H N++ + G + + M++ EY+ N SLD ++ +A
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
Query: 514 KRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARI 573
+ +++ + ++ GIA G+ YL S + +HRDL A N+L+++ + K+SDFG++R+
Sbjct: 143 QFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 574 FGGDQIEENTNRVVGT-YGYMAPEYAMEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLE 631
D T R + +PE F++ SDV+S+G++L E++ G R
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP------ 250
Query: 632 QGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRC----IHLGLLCVQEQATDR 687
W++ + + V K++ E P + C L L C Q+ +R
Sbjct: 251 -----------YWEM-----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNR 294
Query: 688 PNMSAVVSML 697
P +VS+L
Sbjct: 295 PKFEQIVSIL 304
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 148/310 (47%), Gaps = 47/310 (15%)
Query: 400 DDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQ--NGKEIAVKRLSRS 457
D ++ E+ D +NI S D +G G FG V G L+ + KEI+V +
Sbjct: 30 DPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 458 SG---QGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFD-EA 513
G + +F E +++ Q H N++ + G + + M++ EY+ N SLD ++ +A
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
Query: 514 KRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARI 573
+ +++ + ++ GIA G+ YL S + +HRDL A N+L+++ + K+SDFG++R+
Sbjct: 143 QFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 574 FGGDQIEENTNRVVGT-YGYMAPEYAMEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLE 631
D T R + +PE F++ SDV+S+G++L E++ G R
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP------ 250
Query: 632 QGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRC----IHLGLLCVQEQATDR 687
W++ + + V K++ E P + C L L C Q+ +R
Sbjct: 251 -----------YWEM-----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNR 294
Query: 688 PNMSAVVSML 697
P +VS+L
Sbjct: 295 PKFEQIVSIL 304
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 148/310 (47%), Gaps = 47/310 (15%)
Query: 400 DDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQ--NGKEIAVKRLSRS 457
D ++ E+ D +NI S D +G G FG V G L+ + KEI+V +
Sbjct: 30 DPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 458 SG---QGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFD-EA 513
G + +F E +++ Q H N++ + G + + M++ EY+ N SLD ++ +A
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
Query: 514 KRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARI 573
+ +++ + ++ GIA G+ YL S + +HRDL A N+L+++ + K+SDFG++R+
Sbjct: 143 QFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 574 FGGDQIEENTNRVVGT-YGYMAPEYAMEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLE 631
D T R + +PE F++ SDV+S+G++L E++ G R
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP------ 250
Query: 632 QGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRC----IHLGLLCVQEQATDR 687
W++ + + V K++ E P + C L L C Q+ +R
Sbjct: 251 -----------YWEM-----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNR 294
Query: 688 PNMSAVVSML 697
P +VS+L
Sbjct: 295 PKFEQIVSIL 304
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 147/310 (47%), Gaps = 47/310 (15%)
Query: 400 DDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQ--NGKEIAVKRLSRS 457
D ++ E+ D +NI S D +G G FG V G L+ + KEI+V +
Sbjct: 30 DPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 458 SG---QGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFD-EA 513
G + +F E +++ Q H N++ + G + + M++ EY+ N SLD ++ +A
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
Query: 514 KRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARI 573
+ +++ + ++ GIA G+ YL S + +HRDL A N+L+++ + K+SDFG+ R+
Sbjct: 143 QFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRV 196
Query: 574 FGGDQIEENTNRVVGT-YGYMAPEYAMEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLE 631
D T R + +PE F++ SDV+S+G++L E++ G R
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP------ 250
Query: 632 QGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRC----IHLGLLCVQEQATDR 687
W++ + + V K++ E P + C L L C Q+ +R
Sbjct: 251 -----------YWEM-----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNR 294
Query: 688 PNMSAVVSML 697
P +VS+L
Sbjct: 295 PKFEQIVSIL 304
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 20/203 (9%)
Query: 430 LGEGGFGSV----YKGVLQN-GKEIAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNLVSI 483
LGEG FG V Y N G+++AVK L S G I + K EI ++ L H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 484 LGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
G C E+ LI E+LP+ SL Y+ ++ ++ ++ + I +G+ YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL--GS 144
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQ----IEENTNRVVGTYGYMAPEY 597
R + +HRDL A NVL+++ KI DFG+ + D+ ++++ + V Y APE
Sbjct: 145 R-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY---APEC 200
Query: 598 AMEGLFSTKSDVYSFGVLLLEII 620
M+ F SDV+SFGV L E++
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELL 223
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 11/211 (5%)
Query: 417 IAAATNDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSS---GQGIEEFKTEIALI 472
I DF N LG+G F VY+ + G E+A+K + + + ++ + E+ +
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 473 AQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIAR 532
QL+H +++ + + L+ E N ++ Y+ + K + ++ F + I
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHF--MHQIIT 123
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
G+LYLH I+HRDL SN+LL MN KI+DFG+A E + GT Y
Sbjct: 124 GMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQL--KMPHEKHYTLCGTPNY 178
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
++PE A +SDV+S G + +++GR
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 20/203 (9%)
Query: 430 LGEGGFGSV----YKGVLQN-GKEIAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNLVSI 483
LGEG FG V Y N G+++AVK L S G I + K EI ++ L H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 484 LGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
G C E+ LI E+LP+ SL Y+ ++ ++ ++ + I +G+ YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL--GS 132
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQ----IEENTNRVVGTYGYMAPEY 597
R + +HRDL A NVL+++ KI DFG+ + D+ ++++ + V Y APE
Sbjct: 133 R-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY---APEC 188
Query: 598 AMEGLFSTKSDVYSFGVLLLEII 620
M+ F SDV+SFGV L E++
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELL 211
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 145/299 (48%), Gaps = 41/299 (13%)
Query: 411 VFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQ--NGKEIAVKRLSRSSG---QGIEEF 465
V + + ATN S D +G G FG V G L+ + KEI+V + G + +F
Sbjct: 6 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 466 KTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFD-EAKRSLLDWSKRF 524
E +++ Q H N++ + G + + M++ EY+ N SLD ++ +A+ +++ +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLV 121
Query: 525 EIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTN 584
++ GIA G+ YL S + +HRDL A N+L+++ + K+SDFG++R+ D T
Sbjct: 122 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 585 RVVGT-YGYMAPEYAMEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLEQGSGSWNLVGH 642
R + +PE F++ SDV+S+G++L E++ G R
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER-----------------P 221
Query: 643 VWDLWKEGTAMEAVDKSLGESCCAPEILRC----IHLGLLCVQEQATDRPNMSAVVSML 697
W++ + + V K++ E P + C L L C Q+ +RP +VS+L
Sbjct: 222 YWEM-----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 115/213 (53%), Gaps = 16/213 (7%)
Query: 419 AATNDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQ 476
++++ F KLG G + +VYKG+ + G +A+K + S +G EI+L+ +L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSL-LDWSKRFEIICGIAR 532
H N+V + E + L++E++ N K +D R L L+ K F+ + +
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQ--WQLLQ 119
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENT-NRVVGTYG 591
G+ + H++ +I+HRDLK N+L++ K+ DFG+AR FG I NT + V T
Sbjct: 120 GLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG---IPVNTFSSEVVTLW 173
Query: 592 YMAPEYAM-EGLFSTKSDVYSFGVLLLEIILGR 623
Y AP+ M +ST D++S G +L E+I G+
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 145/299 (48%), Gaps = 41/299 (13%)
Query: 411 VFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQ--NGKEIAVKRLSRSSG---QGIEEF 465
V + + ATN S D +G G FG V G L+ + KEI+V + G + +F
Sbjct: 23 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 81
Query: 466 KTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFD-EAKRSLLDWSKRF 524
E +++ Q H N++ + G + + M++ EY+ N SLD ++ +A+ +++ +
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLV 138
Query: 525 EIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTN 584
++ GIA G+ YL S + +HRDL A N+L+++ + K+SDFG++R+ D T
Sbjct: 139 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 195
Query: 585 RVVGT-YGYMAPEYAMEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLEQGSGSWNLVGH 642
R + +PE F++ SDV+S+G++L E++ G R
Sbjct: 196 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER-----------------P 238
Query: 643 VWDLWKEGTAMEAVDKSLGESCCAPEILRC----IHLGLLCVQEQATDRPNMSAVVSML 697
W++ + + V K++ E P + C L L C Q+ +RP +VS+L
Sbjct: 239 YWEM-----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 429 KLGEGGFGSVYKGVL------QNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
+LGEG FG V+ Q+ +AVK L +S ++F E L+ LQH ++V
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSL----------LDWSKRFEIICGIAR 532
G C+E ++++EY+ + L+ ++ ++ L S+ I IA
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG---- 588
G++YL + +HRDL N L+ + KI DFGM+R D + RV G
Sbjct: 140 GMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR----DVYSTDYYRVGGHTML 192
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+M PE M F+T+SDV+S GV+L EI
Sbjct: 193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIF 224
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 19/217 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEIAV-KRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
+D LG+G FG K + E+ V K L R + F E+ ++ L+H N+
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV 69
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
+ +G +++ I EY+ +L I ++ S WS+R IA G+ YLH
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRGII--KSMDSQYPWSQRVSFAKDIASGMAYLHS- 126
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR------------VVG 588
+ IIHRDL + N L+ N ++DFG+AR+ ++ + R VVG
Sbjct: 127 --MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRN 625
+MAPE + K DV+SFG++L EII GR N
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVN 220
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKE------IAVKRLSRSSGQGIEEFKTEIALIAQL 475
D +LGEG FG V+ N +AVK L + ++F+ E L+ L
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 74
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSL-------------LDWSK 522
QH ++V G C + ++++EY+ + L+ ++ ++ L S+
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 523 RFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN 582
I IA G++YL + +HRDL N L+ A + KI DFGM+R D +
Sbjct: 135 MLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR----DVYSTD 187
Query: 583 TNRVVG----TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHL 630
RV G +M PE M F+T+SDV+SFGV+L EI + F L
Sbjct: 188 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQL 239
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 137/291 (47%), Gaps = 35/291 (12%)
Query: 403 RRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGI 462
+R+S Y + S + +T ++G G FG+VYKG + + ++ + +
Sbjct: 24 QRDSSYYWEIEASEVMLST-------RIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQF 76
Query: 463 EEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSK 522
+ F+ E+A++ + +H N++ +G ++ ++ ++ SL Y + + +
Sbjct: 77 QAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSL--YKHLHVQETKFQMFQ 133
Query: 523 RFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMA----RIFGGDQ 578
+I A+G+ YLH + IIHRD+K++N+ L + KI DFG+A R G Q
Sbjct: 134 LIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190
Query: 579 IEENTNRVVGTYGYMAPEYAM---EGLFSTKSDVYSFGVLLLEIILG---------RRNN 626
+E+ T V+ +MAPE FS +SDVYS+G++L E++ G R
Sbjct: 191 VEQPTGSVL----WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI 246
Query: 627 TFHLEQGSGSWNLVGHVWDLWKEGTAMEA--VDKSLGESCCAPEILRCIHL 675
F + +G S +L + K + A V K E P+IL I L
Sbjct: 247 IFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG+VYKG + + ++ + Q ++ FK E+ ++ + +H N++ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ Q ++ ++ SL Y + + K +I A+G+ YLH S IIH
Sbjct: 79 TKPQLA-IVTQWCEGSSL--YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 132
Query: 548 RDLKASNVLLDAAMNPKISDFGMA----RIFGGDQIEENTNRVVGTYGYMAPEYAM---E 600
RDLK++N+ L + KI DFG+A R G Q E+ + G+ +MAPE +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDK 188
Query: 601 GLFSTKSDVYSFGVLLLEIILGR 623
+S +SDVY+FG++L E++ G+
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG+VYKG + + ++ + Q ++ FK E+ ++ + +H N++ +G
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ Q ++ ++ SL Y + + K +I A+G+ YLH S IIH
Sbjct: 101 TKPQLA-IVTQWCEGSSL--YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 154
Query: 548 RDLKASNVLLDAAMNPKISDFGMA----RIFGGDQIEENTNRVVGTYGYMAPEYAM---E 600
RDLK++N+ L + KI DFG+A R G Q E+ + G+ +MAPE +
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDK 210
Query: 601 GLFSTKSDVYSFGVLLLEIILGR 623
+S +SDVY+FG++L E++ G+
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG+VYKG + + ++ + Q ++ FK E+ ++ + +H N++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ Q ++ ++ SL Y + + K +I A+G+ YLH S IIH
Sbjct: 74 TKPQLA-IVTQWCEGSSL--YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 548 RDLKASNVLLDAAMNPKISDFGMA----RIFGGDQIEENTNRVVGTYGYMAPEYAM---E 600
RDLK++N+ L + KI DFG+A R G Q E+ + G+ +MAPE +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDK 183
Query: 601 GLFSTKSDVYSFGVLLLEIILGR 623
+S +SDVY+FG++L E++ G+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG+VYKG + + ++ + Q ++ FK E+ ++ + +H N++ +G
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ Q ++ ++ SL Y + + K +I A+G+ YLH S IIH
Sbjct: 94 TKPQLA-IVTQWCEGSSL--YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 147
Query: 548 RDLKASNVLLDAAMNPKISDFGMA----RIFGGDQIEENTNRVVGTYGYMAPEYAM---E 600
RDLK++N+ L + KI DFG+A R G Q E+ + G+ +MAPE +
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDK 203
Query: 601 GLFSTKSDVYSFGVLLLEIILGR 623
+S +SDVY+FG++L E++ G+
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG+VYKG + + ++ + Q ++ FK E+ ++ + +H N++ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ Q ++ ++ SL Y + + K +I A+G+ YLH S IIH
Sbjct: 79 TKPQLA-IVTQWCEGSSL--YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 132
Query: 548 RDLKASNVLLDAAMNPKISDFGMA----RIFGGDQIEENTNRVVGTYGYMAPEYAM---E 600
RDLK++N+ L + KI DFG+A R G Q E+ + G+ +MAPE +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDK 188
Query: 601 GLFSTKSDVYSFGVLLLEIILGR 623
+S +SDVY+FG++L E++ G+
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG+VYKG + + ++ + Q ++ FK E+ ++ + +H N++ +G
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ Q ++ ++ SL Y + + K +I A+G+ YLH S IIH
Sbjct: 76 TKPQLA-IVTQWCEGSSL--YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 129
Query: 548 RDLKASNVLLDAAMNPKISDFGMA----RIFGGDQIEENTNRVVGTYGYMAPEYAM---E 600
RDLK++N+ L + KI DFG+A R G Q E+ + G+ +MAPE +
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDK 185
Query: 601 GLFSTKSDVYSFGVLLLEIILGR 623
+S +SDVY+FG++L E++ G+
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
++LG+G FGSV Y + N G +AVK+L S +F+ EI ++ L +V
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 483 ILGCCIE--EQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G Q L+ EYLP+ L ++ + R+ LD S+ I +G+ YL
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--G 132
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQ----IEENTNRVVGTYGYMAPE 596
SR R +HRDL A N+L+++ + KI+DFG+A++ D+ + E + Y APE
Sbjct: 133 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY---APE 188
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
+ +FS +SDV+SFGV+L E+
Sbjct: 189 SLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG+VYKG + + ++ + Q ++ FK E+ ++ + +H N++ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ Q ++ ++ SL Y + + K +I A+G+ YLH S IIH
Sbjct: 102 TKPQLA-IVTQWCEGSSL--YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 155
Query: 548 RDLKASNVLLDAAMNPKISDFGMA----RIFGGDQIEENTNRVVGTYGYMAPEYAM---E 600
RDLK++N+ L + KI DFG+A R G Q E+ + G+ +MAPE +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDK 211
Query: 601 GLFSTKSDVYSFGVLLLEIILGR 623
+S +SDVY+FG++L E++ G+
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG+VYKG + + ++ + Q ++ FK E+ ++ + +H N++ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ Q ++ ++ SL Y + + K +I A+G+ YLH S IIH
Sbjct: 102 TKPQLA-IVTQWCEGSSL--YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 155
Query: 548 RDLKASNVLLDAAMNPKISDFGMA----RIFGGDQIEENTNRVVGTYGYMAPEYAM---E 600
RDLK++N+ L + KI DFG+A R G Q E+ + G+ +MAPE +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDK 211
Query: 601 GLFSTKSDVYSFGVLLLEIILGR 623
+S +SDVY+FG++L E++ G+
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
++LG+G FGSV Y + N G +AVK+L S +F+ EI ++ L +V
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 483 ILGCCIE--EQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G Q L+ EYLP+ L ++ + R+ LD S+ I +G+ YL
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--G 131
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQ----IEENTNRVVGTYGYMAPE 596
SR R +HRDL A N+L+++ + KI+DFG+A++ D+ + E + Y APE
Sbjct: 132 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY---APE 187
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
+ +FS +SDV+SFGV+L E+
Sbjct: 188 SLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG+VYKG + + ++ + Q ++ FK E+ ++ + +H N++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ Q ++ ++ SL Y + + K +I A+G+ YLH S IIH
Sbjct: 74 TKPQLA-IVTQWCEGSSL--YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 548 RDLKASNVLLDAAMNPKISDFGMA----RIFGGDQIEENTNRVVGTYGYMAPEYAM---E 600
RDLK++N+ L + KI DFG+A R G Q E+ + G+ +MAPE +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDK 183
Query: 601 GLFSTKSDVYSFGVLLLEIILGR 623
+S +SDVY+FG++L E++ G+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
++LG+G FGSV Y + N G +AVK+L S +F+ EI ++ L +V
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 483 ILGCCIE--EQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G Q L+ EYLP+ L ++ + R+ LD S+ I +G+ YL
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--G 144
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQ----IEENTNRVVGTYGYMAPE 596
SR R +HRDL A N+L+++ + KI+DFG+A++ D+ + E + Y APE
Sbjct: 145 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY---APE 200
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
+ +FS +SDV+SFGV+L E+
Sbjct: 201 SLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 11/206 (5%)
Query: 424 FSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLS-RSSGQGIEEFKTEIALIAQLQHRNLV 481
F+ +++G+G FG VYKG+ + KE+ A+K + + IE+ + EI +++Q +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
G ++ + +I EYL S D K L+ + I+ I +G+ YLH +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGS----ALDLLKPGPLEETYIATILREILKGLDYLHSE- 135
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
R IHRD+KA+NVLL + K++DFG+A QI+ N VGT +MAPE +
Sbjct: 136 --RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQS 191
Query: 602 LFSTKSDVYSFGVLLLEIILGRRNNT 627
+ K+D++S G+ +E+ G N+
Sbjct: 192 AYDFKADIWSLGITAIELAKGEPPNS 217
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 147/310 (47%), Gaps = 47/310 (15%)
Query: 400 DDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQ--NGKEIAVKRLSRS 457
D ++ E+ D +NI S D +G G FG V G L+ + KEI+V +
Sbjct: 30 DPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 458 SG---QGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFD-EA 513
G + +F E +++ Q H N++ + G + + M++ E + N SLD ++ +A
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA 142
Query: 514 KRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARI 573
+ +++ + ++ GIA G+ YL S + +HRDL A N+L+++ + K+SDFG++R+
Sbjct: 143 QFTVI---QLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 574 FGGDQIEENTNRVVGT-YGYMAPEYAMEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLE 631
D T R + +PE F++ SDV+S+G++L E++ G R
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP------ 250
Query: 632 QGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRC----IHLGLLCVQEQATDR 687
W++ + + V K++ E P + C L L C Q+ +R
Sbjct: 251 -----------YWEM-----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNR 294
Query: 688 PNMSAVVSML 697
P +VS+L
Sbjct: 295 PKFEQIVSIL 304
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 147/310 (47%), Gaps = 47/310 (15%)
Query: 400 DDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQ--NGKEIAVKRLSRS 457
D ++ E+ D +NI S D +G G FG V G L+ + KEI+V +
Sbjct: 30 DPTQTVHEFAKELDATNI-------SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 458 SG---QGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFD-EA 513
G + +F E +++ Q H N++ + G + + M++ E + N SLD ++ +A
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA 142
Query: 514 KRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARI 573
+ +++ + ++ GIA G+ YL S + +HRDL A N+L+++ + K+SDFG++R+
Sbjct: 143 QFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 574 FGGDQIEENTNRVVGT-YGYMAPEYAMEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLE 631
D T R + +PE F++ SDV+S+G++L E++ G R
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP------ 250
Query: 632 QGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRC----IHLGLLCVQEQATDR 687
W++ + + V K++ E P + C L L C Q+ +R
Sbjct: 251 -----------YWEM-----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNR 294
Query: 688 PNMSAVVSML 697
P +VS+L
Sbjct: 295 PKFEQIVSIL 304
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 106/203 (52%), Gaps = 17/203 (8%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
++G G FG+VYKG + + ++ + Q ++ FK E+ ++ + +H N++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
Q ++ ++ SL Y + + K +I A+G+ YLH S IIH
Sbjct: 74 TAPQLA-IVTQWCEGSSL--YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 548 RDLKASNVLLDAAMNPKISDFGMA----RIFGGDQIEENTNRVVGTYGYMAPEYAM---E 600
RDLK++N+ L + KI DFG+A R G Q E+ + G+ +MAPE +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDK 183
Query: 601 GLFSTKSDVYSFGVLLLEIILGR 623
+S +SDVY+FG++L E++ G+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 19/204 (9%)
Query: 428 NKLGEGGFGSV----YKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
++LG+G FGSV Y + N G +AVK+L S +F+ EI ++ L +V
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 483 ILGCCIE--EQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
G E L+ EYLP+ L ++ + R+ LD S+ I +G+ YL
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--G 128
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQ----IEENTNRVVGTYGYMAPE 596
SR R +HRDL A N+L+++ + KI+DFG+A++ D+ + E + Y APE
Sbjct: 129 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY---APE 184
Query: 597 YAMEGLFSTKSDVYSFGVLLLEII 620
+ +FS +SDV+SFGV+L E+
Sbjct: 185 SLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 125/242 (51%), Gaps = 25/242 (10%)
Query: 417 IAAATNDFSSDNKLGEGGFGSVYKGV-LQNG-KEIAVKRLSRSSGQGIEEFKT--EIALI 472
+ A + ++GEG +G V+K L+NG + +A+KR+ +G+ T E+A++
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 473 AQLQ---HRNLVSILGCCI-----EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF 524
L+ H N+V + C E + L++E++ ++ L Y+ D+ +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIK 123
Query: 525 EIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTN 584
+++ + RG+ +LH R++HRDLK N+L+ ++ K++DFG+ARI+ +
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALT 177
Query: 585 RVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVW 644
VV T Y APE ++ ++T D++S G + E+ RR F +GS + +G +
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLF---RGSSDVDQLGKIL 232
Query: 645 DL 646
D+
Sbjct: 233 DV 234
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 41/299 (13%)
Query: 411 VFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQ--NGKEIAVKRLSRSSG---QGIEEF 465
V + + ATN S D +G G FG V G L+ + KEI+V + G + +F
Sbjct: 6 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 466 KTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFD-EAKRSLLDWSKRF 524
E +++ Q H N++ + G + + M++ E + N SLD ++ +A+ +++ +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---QLV 121
Query: 525 EIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTN 584
++ GIA G+ YL S + +HRDL A N+L+++ + K+SDFG++R+ D T
Sbjct: 122 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 585 RVVGT-YGYMAPEYAMEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLEQGSGSWNLVGH 642
R + +PE F++ SDV+S+G++L E++ G R
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER-----------------P 221
Query: 643 VWDLWKEGTAMEAVDKSLGESCCAPEILRC----IHLGLLCVQEQATDRPNMSAVVSML 697
W++ + + V K++ E P + C L L C Q+ +RP +VS+L
Sbjct: 222 YWEM-----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 113/215 (52%), Gaps = 11/215 (5%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLS-RSSGQGIEEFKTEIALI 472
+NIA F+ ++G+G FG V+KG+ +++ A+K + + IE+ + EI ++
Sbjct: 16 NNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVL 75
Query: 473 AQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIAR 532
+Q + G ++ + +I EYL S D + D + ++ I +
Sbjct: 76 SQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGS----ALDLLRAGPFDEFQIATMLKEILK 131
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
G+ YLH + + IHRD+KA+NVLL + K++DFG+A QI+ NT VGT +
Sbjct: 132 GLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFW 186
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNT 627
MAPE + + +K+D++S G+ +E+ G N+
Sbjct: 187 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNS 221
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 13/191 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCIE 489
+G+G FG V G + G ++AVK + + + F E +++ QL+H NLV +LG +E
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 490 EQEKM-LIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ + ++ EY+ SL Y+ RS+L + + + YL ++ +HR
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 132
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSD 608
DL A NVL+ K+SDFG+ + Q +T ++ + APE E FSTKSD
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKL--PVKWTAPEALREAAFSTKSD 187
Query: 609 VYSFGVLLLEI 619
V+SFG+LL EI
Sbjct: 188 VWSFGILLWEI 198
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 125/242 (51%), Gaps = 25/242 (10%)
Query: 417 IAAATNDFSSDNKLGEGGFGSVYKGV-LQNG-KEIAVKRLSRSSGQGIEEFKT--EIALI 472
+ A + ++GEG +G V+K L+NG + +A+KR+ +G+ T E+A++
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 473 AQLQ---HRNLVSILGCCI-----EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF 524
L+ H N+V + C E + L++E++ ++ L Y+ D+ +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIK 123
Query: 525 EIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTN 584
+++ + RG+ +LH R++HRDLK N+L+ ++ K++DFG+ARI+ +
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALT 177
Query: 585 RVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVW 644
VV T Y APE ++ ++T D++S G + E+ RR F +GS + +G +
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLF---RGSSDVDQLGKIL 232
Query: 645 DL 646
D+
Sbjct: 233 DV 234
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 124/239 (51%), Gaps = 25/239 (10%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGV-LQNG-KEIAVKRLSRSSGQGIEEFKT--EIALIAQL 475
A + ++GEG +G V+K L+NG + +A+KR+ +G+ T E+A++ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 476 Q---HRNLVSILGCCI-----EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEII 527
+ H N+V + C E + L++E++ ++ L Y+ D+ + +++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 528 CGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVV 587
+ RG+ +LH R++HRDLK N+L+ ++ K++DFG+ARI+ + VV
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVV 180
Query: 588 GTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDL 646
T Y APE ++ ++T D++S G + E+ RR F +GS + +G + D+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLF---RGSSDVDQLGKILDV 234
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 14/200 (7%)
Query: 428 NKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G FG V G + ++AVK + S +EF E + +L H LV G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+E ++ EY+ N L Y+ K L+ S+ E+ + G+ +L + IH
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLESH---QFIH 127
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGT---YGYMAPEYAMEGLFS 604
RDL A N L+D + K+SDFGM R DQ + VGT + APE +S
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS----VGTKFPVKWSAPEVFHYFKYS 183
Query: 605 TKSDVYSFGVLLLEII-LGR 623
+KSDV++FG+L+ E+ LG+
Sbjct: 184 SKSDVWAFGILMWEVFSLGK 203
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 120/282 (42%), Gaps = 34/282 (12%)
Query: 430 LGEGGFGSVYKGVLQ------NGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVS 482
LG G FG VY+G + + ++AVK L + E +F E +I++L H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR----SLLDWSKRFEIICGIARGILYLH 538
+G ++ + ++ E + L ++ + R S L + IA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 539 QDSRLRIIHRDLKASNVLLD---AAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
++ IHRD+ A N LL KI DFGMAR + +M P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEA 655
E MEG+F++K+D +SFGVLL EI F L V + G M+
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDP 267
Query: 656 VDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
++C P + C Q Q DRPN + ++ +
Sbjct: 268 -----PKNCPGP----VYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 128/284 (45%), Gaps = 48/284 (16%)
Query: 430 LGEGGFGSVYKGVL----QNGKEIAVKRLSRS-SGQGIEEFKTEIALIAQLQHRNLVSIL 484
+G G G V G L Q +A+K L + + +F +E +++ Q H N++ +
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
G + M++ EY+ N SLD ++ + ++ G+ G+ YL S L
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYL---SDLG 171
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG------YMAPEYA 598
+HRDL A NVL+D+ + K+SDFG++R+ +E++ + T G + APE
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRV-----LEDDPDAAXTTTGGKIPIRWTAPEAI 226
Query: 599 MEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVD 657
FS+ SDV+SFGV++ E++ G R WN+ V
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLAYGERPY----------WNMTN------------RDVI 264
Query: 658 KSLGESCCAPEILRCIH----LGLLCVQEQATDRPNMSAVVSML 697
S+ E P + C H L L C + RP S +VS+L
Sbjct: 265 SSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 11/201 (5%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNLV 481
F+ K+G+G FG V+KG+ + K +A+K + + IE+ + EI +++Q +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
G +++ + +I EYL S D + LD ++ I+ I +G+ YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
+ IHRD+KA+NVLL K++DFG+A QI+ NT VGT +MAPE +
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQS 179
Query: 602 LFSTKSDVYSFGVLLLEIILG 622
+ +K+D++S G+ +E+ G
Sbjct: 180 AYDSKADIWSLGITAIELARG 200
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 128/284 (45%), Gaps = 48/284 (16%)
Query: 430 LGEGGFGSVYKGVL----QNGKEIAVKRLSRS-SGQGIEEFKTEIALIAQLQHRNLVSIL 484
+G G G V G L Q +A+K L + + +F +E +++ Q H N++ +
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
G + M++ EY+ N SLD ++ + ++ G+ G+ YL S L
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYL---SDLG 171
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG------YMAPEYA 598
+HRDL A NVL+D+ + K+SDFG++R+ +E++ + T G + APE
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRV-----LEDDPDAAYTTTGGKIPIRWTAPEAI 226
Query: 599 MEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVD 657
FS+ SDV+SFGV++ E++ G R WN+ V
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLAYGERPY----------WNMTN------------RDVI 264
Query: 658 KSLGESCCAPEILRCIH----LGLLCVQEQATDRPNMSAVVSML 697
S+ E P + C H L L C + RP S +VS+L
Sbjct: 265 SSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 120/282 (42%), Gaps = 34/282 (12%)
Query: 430 LGEGGFGSVYKGVLQ------NGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVS 482
LG G FG VY+G + + ++AVK L + E +F E +I++L H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR----SLLDWSKRFEIICGIARGILYLH 538
+G ++ + ++ E + L ++ + R S L + IA G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 539 QDSRLRIIHRDLKASNVLLD---AAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
++ IHRD+ A N LL KI DFGMAR + +M P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEA 655
E MEG+F++K+D +SFGVLL EI F L V + G M+
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDP 281
Query: 656 VDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
++C P + C Q Q DRPN + ++ +
Sbjct: 282 -----PKNCPGP----VYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 109/202 (53%), Gaps = 11/202 (5%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNLV 481
F+ K+G+G FG V+KG+ + K +A+K + + IE+ + EI +++Q +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
G +++ + +I EYL S D + LD ++ I+ I +G+ YLH +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHSEK 144
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
+ IHRD+KA+NVLL K++DFG+A QI+ NT VGT +MAPE +
Sbjct: 145 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQS 199
Query: 602 LFSTKSDVYSFGVLLLEIILGR 623
+ +K+D++S G+ +E+ G
Sbjct: 200 AYDSKADIWSLGITAIELARGE 221
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W IA
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWC------VQIA 128
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 129 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELM 214
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 13/191 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCIE 489
+G+G FG V G + G ++AVK + + + F E +++ QL+H NLV +LG +E
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 490 EQEKM-LIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ + ++ EY+ SL Y+ RS+L + + + YL ++ +HR
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 313
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSD 608
DL A NVL+ K+SDFG+ + Q +T ++ + APE E FSTKSD
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKL--PVKWTAPEALREKKFSTKSD 368
Query: 609 VYSFGVLLLEI 619
V+SFG+LL EI
Sbjct: 369 VWSFGILLWEI 379
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 131
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 132 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 188
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELM 217
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 131 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 128
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 129 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELM 214
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 128/284 (45%), Gaps = 29/284 (10%)
Query: 430 LGEGGFGSVYKGVLQ-----NGKEIAVKRLSRSSGQGIEE-FKTEIALIAQLQHRNLVSI 483
LGEG FG V G+ +AVK L G + ++ EI ++ L H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 484 LGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
GCC ++ EK L+ EY+P SL Y+ R + ++ I G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHAQ- 131
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGD--QIEENTNRVVGTYGYMAPEY 597
IHR L A NVLLD KI DFG+A+ G + ++ E+ + V Y APE
Sbjct: 132 --HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY---APEC 186
Query: 598 AMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVD 657
E F SDV+SFGV L E++ +N + L+GH E ++
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLTYCDSNQ---SPHTKFTELIGHTQGQMTVLRLTELLE 243
Query: 658 KSLGESCCAPEILRC--IHLGLLCVQEQATDRPNMSAVVSMLGS 699
+ GE P+ C HL C + +A+ RP +V +L +
Sbjct: 244 R--GERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 285
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 128/284 (45%), Gaps = 29/284 (10%)
Query: 430 LGEGGFGSVYKGVLQ-----NGKEIAVKRLSRSSGQGIEE-FKTEIALIAQLQHRNLVSI 483
LGEG FG V G+ +AVK L G + ++ EI ++ L H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 484 LGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
GCC ++ EK L+ EY+P SL Y+ R + ++ I G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHAQ- 130
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGD--QIEENTNRVVGTYGYMAPEY 597
IHR L A NVLLD KI DFG+A+ G + ++ E+ + V Y APE
Sbjct: 131 --HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY---APEC 185
Query: 598 AMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVD 657
E F SDV+SFGV L E++ +N + L+GH E ++
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLTYCDSNQ---SPHTKFTELIGHTQGQMTVLRLTELLE 242
Query: 658 KSLGESCCAPEILRC--IHLGLLCVQEQATDRPNMSAVVSMLGS 699
+ GE P+ C HL C + +A+ RP +V +L +
Sbjct: 243 R--GERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 284
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 131 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 81 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 133
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 134 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 190
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELM 219
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 13/191 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCIE 489
+G+G FG V G + G ++AVK + + + F E +++ QL+H NLV +LG +E
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 490 EQEKM-LIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ + ++ EY+ SL Y+ RS+L + + + YL ++ +HR
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 141
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSD 608
DL A NVL+ K+SDFG+ + Q +T ++ + APE E FSTKSD
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKL--PVKWTAPEALREKKFSTKSD 196
Query: 609 VYSFGVLLLEI 619
V+SFG+LL EI
Sbjct: 197 VWSFGILLWEI 207
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 131 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 135 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 13/191 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCIE 489
+G+G FG V G + G ++AVK + + + F E +++ QL+H NLV +LG +E
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 490 EQEKM-LIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E+ + ++ EY+ SL Y+ RS+L + + + YL ++ +HR
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 126
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSD 608
DL A NVL+ K+SDFG+ + Q +T ++ + APE E FSTKSD
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKL--PVKWTAPEALREKKFSTKSD 181
Query: 609 VYSFGVLLLEI 619
V+SFG+LL EI
Sbjct: 182 VWSFGILLWEI 192
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 119/282 (42%), Gaps = 34/282 (12%)
Query: 430 LGEGGFGSVYKGVLQ------NGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVS 482
LG G FG VY+G + + ++AVK L + E +F E +I++ H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR----SLLDWSKRFEIICGIARGILYLH 538
+G ++ + ++ E + L ++ + R S L + IA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 539 QDSRLRIIHRDLKASNVLLD---AAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
++ IHRD+ A N LL KI DFGMAR + +M P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEA 655
E MEG+F++K+D +SFGVLL EI F L V + G M+
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDP 267
Query: 656 VDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
++C P + C Q Q DRPN + ++ +
Sbjct: 268 -----PKNCPGP----VYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 134/323 (41%), Gaps = 42/323 (13%)
Query: 397 AELDDSRRNSEYLPVFDLSNIAAATNDFSSDNK--------LGEGGFGSVYKGVLQ---- 444
++L S ++Y P + + ++ +D + LG G FG VY+G +
Sbjct: 4 SKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPN 63
Query: 445 --NGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLP 501
+ ++AVK L + E +F E +I++ H+N+V +G ++ + ++ E +
Sbjct: 64 DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 123
Query: 502 NKSLDVYIFDEAKR----SLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLL 557
L ++ + R S L + IA G YL ++ IHRD+ A N LL
Sbjct: 124 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 180
Query: 558 D---AAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGV 614
KI DFGMAR + +M PE MEG+F++K+D +SFGV
Sbjct: 181 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 240
Query: 615 LLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCIH 674
LL EI F L V + G M+ ++C P
Sbjct: 241 LLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDP-----PKNCPGP----VYR 283
Query: 675 LGLLCVQEQATDRPNMSAVVSML 697
+ C Q Q DRPN + ++ +
Sbjct: 284 IMTQCWQHQPEDRPNFAIILERI 306
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 69 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 121
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 122 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELM 207
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 130
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 131 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W IA
Sbjct: 85 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 137
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 138 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELM 223
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 100 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 152
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 153 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 209
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 210 WMALESILHRIYTHQSDVWSYGVTVWELM 238
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 414 LSNIAAATND-FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLS-RSSGQGIEEFKTEIA 470
+ N+ A + F+ K+G+G FG V+KG+ + K +A+K + + IE+ + EI
Sbjct: 13 MQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT 72
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGI 530
+++Q + G +++ + +I EYL S D + LD ++ I+ I
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREI 128
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+G+ YLH + + IHRD+KA+NVLL K++DFG+A QI+ N VGT
Sbjct: 129 LKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTP 183
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+MAPE + + +K+D++S G+ +E+ G
Sbjct: 184 FWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 119/282 (42%), Gaps = 34/282 (12%)
Query: 430 LGEGGFGSVYKGVLQ------NGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVS 482
LG G FG VY+G + + ++AVK L + E +F E +I++ H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR----SLLDWSKRFEIICGIARGILYLH 538
+G ++ + ++ E + L ++ + R S L + IA G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 539 QDSRLRIIHRDLKASNVLLD---AAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
++ IHRD+ A N LL KI DFGMAR + +M P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEA 655
E MEG+F++K+D +SFGVLL EI F L V + G M+
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDP 281
Query: 656 VDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
++C P + C Q Q DRPN + ++ +
Sbjct: 282 -----PKNCPGP----VYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 124/238 (52%), Gaps = 24/238 (10%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQ 476
AT+ + ++G G +G+VYK +G +A+K + +G+ T E+AL+ +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 477 ---HRNLVSILGCCI-----EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIIC 528
H N+V ++ C E + L++E++ ++ L Y+ D+A L +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
RG+ +LH + I+HRDLK N+L+ + K++DFG+ARI+ + + VV
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALDPVVV 173
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDL 646
T Y APE ++ ++T D++S G + E+ RR F G+ + +G ++DL
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLF---CGNSEADQLGKIFDL 226
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 119/282 (42%), Gaps = 34/282 (12%)
Query: 430 LGEGGFGSVYKGVLQ------NGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVS 482
LG G FG VY+G + + ++AVK L + E +F E +I++ H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR----SLLDWSKRFEIICGIARGILYLH 538
+G ++ + ++ E + L ++ + R S L + IA G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 539 QDSRLRIIHRDLKASNVLLD---AAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
++ IHRD+ A N LL KI DFGMAR + +M P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEA 655
E MEG+F++K+D +SFGVLL EI F L V + G M+
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDP 281
Query: 656 VDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
++C P + C Q Q DRPN + ++ +
Sbjct: 282 -----PKNCPGP----VYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 119/282 (42%), Gaps = 34/282 (12%)
Query: 430 LGEGGFGSVYKGVLQ------NGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVS 482
LG G FG VY+G + + ++AVK L + E +F E +I++ H+N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR----SLLDWSKRFEIICGIARGILYLH 538
+G ++ + ++ E + L ++ + R S L + IA G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 539 QDSRLRIIHRDLKASNVLLDA---AMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
++ IHRD+ A N LL KI DFGMAR + +M P
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEA 655
E MEG+F++K+D +SFGVLL EI F L V + G M+
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDP 258
Query: 656 VDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
++C P + C Q Q DRPN + ++ +
Sbjct: 259 -----PKNCPGP----VYRIMTQCWQHQPEDRPNFAIILERI 291
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 118/279 (42%), Gaps = 34/279 (12%)
Query: 430 LGEGGFGSVYKGVLQ------NGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVS 482
LG G FG VY+G + + ++AVK L + E +F E +I++ H+N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR----SLLDWSKRFEIICGIARGILYLH 538
+G ++ + ++ E + L ++ + R S L + IA G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 539 QDSRLRIIHRDLKASNVLLD---AAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
++ IHRD+ A N LL KI DFGMAR + +M P
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEA 655
E MEG+F++K+D +SFGVLL EI F L V + G M+
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDP 283
Query: 656 VDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVV 694
++C P + C Q Q DRPN + ++
Sbjct: 284 -----PKNCPGP----VYRIMTQCWQHQPEDRPNFAIIL 313
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 119/282 (42%), Gaps = 34/282 (12%)
Query: 430 LGEGGFGSVYKGVLQ------NGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVS 482
LG G FG VY+G + + ++AVK L + E +F E +I++ H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR----SLLDWSKRFEIICGIARGILYLH 538
+G ++ + ++ E + L ++ + R S L + IA G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 539 QDSRLRIIHRDLKASNVLLDA---AMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
++ IHRD+ A N LL KI DFGMAR + +M P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEA 655
E MEG+F++K+D +SFGVLL EI F L V + G M+
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDP 266
Query: 656 VDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
++C P + C Q Q DRPN + ++ +
Sbjct: 267 -----PKNCPGP----VYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 119/282 (42%), Gaps = 34/282 (12%)
Query: 430 LGEGGFGSVYKGVLQ------NGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVS 482
LG G FG VY+G + + ++AVK L + E +F E +I++ H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR----SLLDWSKRFEIICGIARGILYLH 538
+G ++ + ++ E + L ++ + R S L + IA G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 539 QDSRLRIIHRDLKASNVLLDA---AMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
++ IHRD+ A N LL KI DFGMAR + +M P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEA 655
E MEG+F++K+D +SFGVLL EI F L V + G M+
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDP 266
Query: 656 VDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
++C P + C Q Q DRPN + ++ +
Sbjct: 267 -----PKNCPGP----VYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
D + +LG G FG V G + ++A+K + S +EF E ++ L H LV
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 82
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+ G C +++ +I EY+ N L Y+ + R + E+ + + YL
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK- 139
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG--YMAPEYAM 599
+ +HRDL A N L++ K+SDFG++R D E T+ V + + PE M
Sbjct: 140 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---EETSSVGSKFPVRWSPPEVLM 194
Query: 600 EGLFSTKSDVYSFGVLLLEI 619
FS+KSD+++FGVL+ EI
Sbjct: 195 YSKFSSKSDIWAFGVLMWEI 214
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 134/323 (41%), Gaps = 42/323 (13%)
Query: 397 AELDDSRRNSEYLPVFDLSNIAAATNDFSSDNK--------LGEGGFGSVYKGVLQ---- 444
++L S ++Y P + + ++ +D + LG G FG VY+G +
Sbjct: 24 SKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPN 83
Query: 445 --NGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLP 501
+ ++AVK L + E +F E +I++ H+N+V +G ++ + ++ E +
Sbjct: 84 DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 143
Query: 502 NKSLDVYIFDEAKR----SLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLL 557
L ++ + R S L + IA G YL ++ IHRD+ A N LL
Sbjct: 144 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 200
Query: 558 D---AAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGV 614
KI DFGMAR + +M PE MEG+F++K+D +SFGV
Sbjct: 201 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 260
Query: 615 LLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCIH 674
LL EI F L V + G M+ ++C P
Sbjct: 261 LLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDP-----PKNCPGP----VYR 303
Query: 675 LGLLCVQEQATDRPNMSAVVSML 697
+ C Q Q DRPN + ++ +
Sbjct: 304 IMTQCWQHQPEDRPNFAIILERI 326
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W IA
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 131
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG A++ G ++ E +
Sbjct: 132 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 188
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELM 217
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 129
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG A++ G ++ E +
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W IA
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 129
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG A++ G ++ E +
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 11/201 (5%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNLV 481
F+ K+G+G FG V+KG+ + K +A+K + + IE+ + EI +++Q +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
G +++ + +I EYL S D + LD ++ I+ I +G+ YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
+ IHRD+KA+NVLL K++DFG+A QI+ N VGT +MAPE +
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQS 179
Query: 602 LFSTKSDVYSFGVLLLEIILG 622
+ +K+D++S G+ +E+ G
Sbjct: 180 AYDSKADIWSLGITAIELARG 200
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 72 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 124
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 125 EGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELM 210
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 119/282 (42%), Gaps = 34/282 (12%)
Query: 430 LGEGGFGSVYKGVLQ------NGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVS 482
LG G FG VY+G + + ++AVK L + E +F E +I++ H+N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR----SLLDWSKRFEIICGIARGILYLH 538
+G ++ + ++ E + L ++ + R S L + IA G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 539 QDSRLRIIHRDLKASNVLLD---AAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
++ IHRD+ A N LL KI DFGMAR + +M P
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEA 655
E MEG+F++K+D +SFGVLL EI F L V + G M+
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDP 307
Query: 656 VDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
++C P + C Q Q DRPN + ++ +
Sbjct: 308 -----PKNCPGP----VYRIMTQCWQHQPEDRPNFAIILERI 340
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 119/282 (42%), Gaps = 34/282 (12%)
Query: 430 LGEGGFGSVYKGVLQ------NGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVS 482
LG G FG VY+G + + ++AVK L + E +F E +I++ H+N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR----SLLDWSKRFEIICGIARGILYLH 538
+G ++ + ++ E + L ++ + R S L + IA G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 539 QDSRLRIIHRDLKASNVLLD---AAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
++ IHRD+ A N LL KI DFGMAR + +M P
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEA 655
E MEG+F++K+D +SFGVLL EI F L V + G M+
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDP 284
Query: 656 VDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
++C P + C Q Q DRPN + ++ +
Sbjct: 285 -----PKNCPGP----VYRIMTQCWQHQPEDRPNFAIILERI 317
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG A++ G ++ E +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 184
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W IA
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 129
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG A++ G ++ E +
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG A++ G ++ E +
Sbjct: 135 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 191
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
D + +LG G FG V G + ++A+K + S +EF E ++ L H LV
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 82
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+ G C +++ +I EY+ N L Y+ + R + E+ + + YL
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK- 139
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG--YMAPEYAM 599
+ +HRDL A N L++ K+SDFG++R D E T+ V + + PE M
Sbjct: 140 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---EYTSSVGSKFPVRWSPPEVLM 194
Query: 600 EGLFSTKSDVYSFGVLLLEI 619
FS+KSD+++FGVL+ EI
Sbjct: 195 YSKFSSKSDIWAFGVLMWEI 214
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
D + +LG G FG V G + ++A+K + S +EF E ++ L H LV
Sbjct: 8 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 66
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+ G C +++ +I EY+ N L Y+ R + E+ + + YL
Sbjct: 67 QLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK- 123
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAM 599
+ +HRDL A N L++ K+SDFG++R D E T+ V + + PE M
Sbjct: 124 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---EYTSSVGSKFPVRWSPPEVLM 178
Query: 600 EGLFSTKSDVYSFGVLLLEI 619
FS+KSD+++FGVL+ EI
Sbjct: 179 YSKFSSKSDIWAFGVLMWEI 198
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 123/238 (51%), Gaps = 24/238 (10%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQ 476
AT+ + ++G G +G+VYK +G +A+K + +G+ T E+AL+ +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 477 ---HRNLVSILGCCI-----EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIIC 528
H N+V ++ C E + L++E++ ++ L Y+ D+A L +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
RG+ +LH + I+HRDLK N+L+ + K++DFG+ARI+ + VV
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALAPVVV 173
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDL 646
T Y APE ++ ++T D++S G + E+ RR F G+ + +G ++DL
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLF---CGNSEADQLGKIFDL 226
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 105/198 (53%), Gaps = 15/198 (7%)
Query: 429 KLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG+G FG VYK + G A K + S + +E++ EI ++A H +V +LG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIIC-GIARGILYLHQDSRLRII 546
+ + ++ E+ P ++D + E R L + + +++C + + +LH RII
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIML-ELDRGLTE--PQIQVVCRQMLEALNFLHSK---RII 131
Query: 547 HRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM-----EG 601
HRDLKA NVL+ + +++DFG++ + + + +GT +MAPE M +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 602 LFSTKSDVYSFGVLLLEI 619
+ K+D++S G+ L+E+
Sbjct: 190 PYDYKADIWSLGITLIEM 207
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
D + +LG G FG V G + ++A+K + S +EF E ++ L H LV
Sbjct: 15 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 73
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+ G C +++ +I EY+ N L Y+ R + E+ + + YL
Sbjct: 74 QLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK- 130
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAM 599
+ +HRDL A N L++ K+SDFG++R D E T+ V + + PE M
Sbjct: 131 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---EYTSSVGSKFPVRWSPPEVLM 185
Query: 600 EGLFSTKSDVYSFGVLLLEI 619
FS+KSD+++FGVL+ EI
Sbjct: 186 YSKFSSKSDIWAFGVLMWEI 205
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
D + +LG G FG V G + ++A+K + S +EF E ++ L H LV
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 67
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+ G C +++ +I EY+ N L Y+ R + E+ + + YL
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK- 124
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAM 599
+ +HRDL A N L++ K+SDFG++R D E T+ V + + PE M
Sbjct: 125 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---EYTSSVGSKFPVRWSPPEVLM 179
Query: 600 EGLFSTKSDVYSFGVLLLEI 619
FS+KSD+++FGVL+ EI
Sbjct: 180 YSKFSSKSDIWAFGVLMWEI 199
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 156/343 (45%), Gaps = 64/343 (18%)
Query: 371 LTYHGDMMDTRTYINAGQDLYVRVDAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKL 430
L +H T+TYI+ D +R ++ D S I + +
Sbjct: 8 LYFHFKFPGTKTYIDP---------ETYEDPNRAVHQFAKELDASCIKI-------ERVI 51
Query: 431 GEGGFGSVYKGVLQ-NGKE---IAVKRLSRS-SGQGIEEFKTEIALIAQLQHRNLVSILG 485
G G FG V G L+ GK +A+K L + + +F E +++ Q H N+V + G
Sbjct: 52 GAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEG 111
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
+ M++ E++ N +LD ++ + + + ++ GIA G+ YL + +
Sbjct: 112 VVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV--IQLVGMLRGIAAGMRYL---ADMGY 166
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG------YMAPEYAM 599
+HRDL A N+L+++ + K+SDFG++R+ IE++ V T G + APE
Sbjct: 167 VHRDLAARNILVNSNLVCKVSDFGLSRV-----IEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
Query: 600 EGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDK 658
F++ SDV+S+G+++ E++ G R WD+ + + V K
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMSYGERP-----------------YWDM-----SNQDVIK 259
Query: 659 SLGESCCAPEILRC---IH-LGLLCVQEQATDRPNMSAVVSML 697
++ E P + C +H L L C Q++ +RP +V +L
Sbjct: 260 AIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGIL 302
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 119/282 (42%), Gaps = 34/282 (12%)
Query: 430 LGEGGFGSVYKGVLQ------NGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVS 482
LG G FG VY+G + + ++AVK L + E +F E +I++ H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR----SLLDWSKRFEIICGIARGILYLH 538
+G ++ + ++ E + L ++ + R S L + IA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 539 QDSRLRIIHRDLKASNVLLD---AAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
++ IHRD+ A N LL KI DFGMA+ + +M P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEA 655
E MEG+F++K+D +SFGVLL EI F L V + G M+
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEI--------FSLGYMPYPSKSNQEVLEFVTSGGRMDP 267
Query: 656 VDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
++C P + C Q Q DRPN + ++ +
Sbjct: 268 -----PKNCPGP----VYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 105/198 (53%), Gaps = 15/198 (7%)
Query: 429 KLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG+G FG VYK + G A K + S + +E++ EI ++A H +V +LG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIIC-GIARGILYLHQDSRLRII 546
+ + ++ E+ P ++D + E R L + + +++C + + +LH RII
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIML-ELDRGLTE--PQIQVVCRQMLEALNFLHSK---RII 139
Query: 547 HRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM-----EG 601
HRDLKA NVL+ + +++DFG++ + + + +GT +MAPE M +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 602 LFSTKSDVYSFGVLLLEI 619
+ K+D++S G+ L+E+
Sbjct: 198 PYDYKADIWSLGITLIEM 215
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 105/201 (52%), Gaps = 10/201 (4%)
Query: 424 FSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
F KLGEG +GSVYK + + G+ +A+K++ S ++E EI+++ Q ++V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVK 88
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSR 542
G + + ++ EY S+ I + L + I+ +G+ YLH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLH---F 143
Query: 543 LRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGL 602
+R IHRD+KA N+LL+ + K++DFG+A + N V+GT +MAPE E
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX--VIGTPFWMAPEVIQEIG 201
Query: 603 FSTKSDVYSFGVLLLEIILGR 623
++ +D++S G+ +E+ G+
Sbjct: 202 YNCVADIWSLGITAIEMAEGK 222
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 123/238 (51%), Gaps = 24/238 (10%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQ 476
AT+ + ++G G +G+VYK +G +A+K + +G+ T E+AL+ +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 477 ---HRNLVSILGCCI-----EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIIC 528
H N+V ++ C E + L++E++ ++ L Y+ D+A L +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
RG+ +LH + I+HRDLK N+L+ + K++DFG+ARI+ + VV
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALFPVVV 173
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDL 646
T Y APE ++ ++T D++S G + E+ RR F G+ + +G ++DL
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLF---CGNSEADQLGKIFDL 226
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 136/293 (46%), Gaps = 34/293 (11%)
Query: 429 KLGEGGFGSVYKG----VLQNGKE--IAVKRLSRSSG-QGIEEFKTEIALIAQLQHRNLV 481
+LG+G FG VY+G +++ E +AVK ++ S+ + EF E +++ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFD---EAK----RSLLDWSKRFEIICGIARGI 534
+LG + Q +++ E + + L Y+ EA+ R + ++ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMA 594
YL+ + +HRDL A N ++ KI DFGM R + + +MA
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 595 PEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAME 654
PE +G+F+T SD++SFGV+L EI + QG + ++ V D G ++
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEIT----SLAEQPYQGLSNEQVLKFVMD----GGYLD 252
Query: 655 AVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLGSDNAPSSPK 707
D +C PE R L +C Q RP +V++L D PS P+
Sbjct: 253 QPD-----NC--PE--RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPE 296
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 38/279 (13%)
Query: 430 LGEGGFGSVYKGVLQ-NGKE---IAVKRLSRS-SGQGIEEFKTEIALIAQLQHRNLVSIL 484
+G G FG V G L+ GK +A+K L + + +F E +++ Q H N++ +
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
G + + M++ EY+ N SLD ++ + + ++ GI+ G+ YL S +
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFL--KKNDGQFTVIQLVGMLRGISAGMKYL---SDMG 144
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGT-YGYMAPEYAMEGLF 603
+HRDL A N+L+++ + K+SDFG++R+ D T R + APE F
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
Query: 604 STKSDVYSFGVLLLEII-LGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGE 662
++ SDV+S+G+++ E++ G R W++ + V K++ E
Sbjct: 205 TSASDVWSYGIVMWEVVSYGERP-----------------YWEMTNQD-----VIKAVEE 242
Query: 663 SCCAPEILRC----IHLGLLCVQEQATDRPNMSAVVSML 697
P + C L L C Q++ RP +V+ML
Sbjct: 243 GYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
D + +LG G FG V G + ++A+K + S +EF E ++ L H LV
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+ G C +++ +I EY+ N L Y+ R + E+ + + YL
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK- 119
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAM 599
+ +HRDL A N L++ K+SDFG++R D E T+ V + + PE M
Sbjct: 120 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---EYTSSVGSKFPVRWSPPEVLM 174
Query: 600 EGLFSTKSDVYSFGVLLLEI 619
FS+KSD+++FGVL+ EI
Sbjct: 175 YSKFSSKSDIWAFGVLMWEI 194
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 113/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F L G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 135 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 21/222 (9%)
Query: 414 LSNIAAATNDFSSDNKLGEGGFGSVYKGVLQN----GKEIAVK--RLSRSSGQGIEEFKT 467
L ++ N LGEG FGSV +G L+ ++AVK +L SS + IEEF +
Sbjct: 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLS 85
Query: 468 EIALIAQLQHRNLVSILGCCIEEQEK-----MLIYEYLPNKSLDVYIFD---EAKRSLLD 519
E A + H N++ +LG CIE + M+I ++ L Y+ E +
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP 145
Query: 520 WSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMA-RIFGGDQ 578
+ + IA G+ YL S +HRDL A N +L M ++DFG++ +I+ GD
Sbjct: 146 LQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY 202
Query: 579 IEENTNRVVGT-YGYMAPEYAMEGLFSTKSDVYSFGVLLLEI 619
+ R+ ++A E + ++++KSDV++FGV + EI
Sbjct: 203 YRQ--GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 113/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F L G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 127
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 113/209 (54%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F L G FG+VYKG+ + G+++ A+K L +S + +E E ++A +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W + IA
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IA 134
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 135 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 136/293 (46%), Gaps = 34/293 (11%)
Query: 429 KLGEGGFGSVYKG----VLQNGKE--IAVKRLSRSSG-QGIEEFKTEIALIAQLQHRNLV 481
+LG+G FG VY+G +++ E +AVK ++ S+ + EF E +++ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFD---EAK----RSLLDWSKRFEIICGIARGI 534
+LG + Q +++ E + + L Y+ EA+ R + ++ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMA 594
YL+ + +HRDL A N ++ KI DFGM R + + +MA
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 595 PEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAME 654
PE +G+F+T SD++SFGV+L EI + QG + ++ V D G ++
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEIT----SLAEQPYQGLSNEQVLKFVMD----GGYLD 252
Query: 655 AVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLGSDNAPSSPK 707
D +C PE R L +C Q RP +V++L D PS P+
Sbjct: 253 QPD-----NC--PE--RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE 296
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 20/209 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQL 475
+F LG G FG+VYKG+ + G+++ A+ L +S + +E E ++A +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIA 531
+ ++ +LG C+ + LI + +P L Y+ + + LL+W IA
Sbjct: 109 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 161
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+G+ YL +D RL +HRDL A NVL+ + KI+DFG+A++ G ++ E +
Sbjct: 162 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 218
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E + +++ +SDV+S+GV + E++
Sbjct: 219 WMALESILHRIYTHQSDVWSYGVTVWELM 247
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 136/293 (46%), Gaps = 34/293 (11%)
Query: 429 KLGEGGFGSVYKG----VLQNGKE--IAVKRLSRSSG-QGIEEFKTEIALIAQLQHRNLV 481
+LG+G FG VY+G +++ E +AVK ++ S+ + EF E +++ ++V
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFD---EAK----RSLLDWSKRFEIICGIARGI 534
+LG + Q +++ E + + L Y+ EA+ R + ++ IA G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMA 594
YL+ + +HRDL A N ++ KI DFGM R + + +MA
Sbjct: 141 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 595 PEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAME 654
PE +G+F+T SD++SFGV+L EI + QG + ++ V D G ++
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEIT----SLAEQPYQGLSNEQVLKFVMD----GGYLD 249
Query: 655 AVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLGSDNAPSSPK 707
D +C PE R L +C Q RP +V++L D PS P+
Sbjct: 250 QPD-----NC--PE--RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE 293
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 19/200 (9%)
Query: 429 KLGEGGFGSVYKGVLQNGKE---IAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILG 485
+LG+G FG VYK QN + A K + S + +E++ EI ++A H N+V +L
Sbjct: 44 ELGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL-YLHQDSRLR 544
E ++ E+ ++D + E +R L + + +++C L YLH + +
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVML-ELERPLTE--SQIQVVCKQTLDALNYLHDN---K 155
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM----- 599
IIHRDLKA N+L + K++DFG++ + + + +GT +MAPE M
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 600 EGLFSTKSDVYSFGVLLLEI 619
+ + K+DV+S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 122/249 (48%), Gaps = 36/249 (14%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRL-SRSSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K ++AVK L S ++ + + + +E+ ++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----------FDEAKRSLLDWSKRFEIIC 528
++++LG C ++ +I EY +L Y+ F+ + S + + C
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 529 G--IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWD 645
+ +MAPE + +++ +SDV+SFGVLL EI F L V ++
Sbjct: 213 RLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEI--------FTLGGSPYPGVPVEELFK 263
Query: 646 LWKEGTAME 654
L KEG M+
Sbjct: 264 LLKEGHRMD 272
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 19/200 (9%)
Query: 429 KLGEGGFGSVYKGVLQNGKE---IAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILG 485
+LG+G FG VYK QN + A K + S + +E++ EI ++A H N+V +L
Sbjct: 44 ELGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL-YLHQDSRLR 544
E ++ E+ ++D + E +R L + + +++C L YLH + +
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVML-ELERPLTE--SQIQVVCKQTLDALNYLHDN---K 155
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM----- 599
IIHRDLKA N+L + K++DFG++ + + + +GT +MAPE M
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 600 EGLFSTKSDVYSFGVLLLEI 619
+ + K+DV+S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 7/198 (3%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
D + +LG G FG V G + ++A+K + S +EF E ++ L H LV
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 67
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+ G C +++ +I EY+ N L Y+ R + E+ + + YL
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK- 124
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
+ +HRDL A N L++ K+SDFG++R D+ + + PE M
Sbjct: 125 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV-RWSPPEVLMYS 181
Query: 602 LFSTKSDVYSFGVLLLEI 619
FS+KSD+++FGVL+ EI
Sbjct: 182 KFSSKSDIWAFGVLMWEI 199
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 19/200 (9%)
Query: 429 KLGEGGFGSVYKGVLQNGKE---IAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILG 485
+LG+G FG VYK QN + A K + S + +E++ EI ++A H N+V +L
Sbjct: 44 ELGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL-YLHQDSRLR 544
E ++ E+ ++D + E +R L + + +++C L YLH + +
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVML-ELERPLTE--SQIQVVCKQTLDALNYLHDN---K 155
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM----- 599
IIHRDLKA N+L + K++DFG++ + + + +GT +MAPE M
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXFIGTPYWMAPEVVMCETSK 213
Query: 600 EGLFSTKSDVYSFGVLLLEI 619
+ + K+DV+S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 13/205 (6%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGK---EIAVKRLSRSSGQG-IEEFKTEIALIAQLQH 477
N +D +LG G FGSV +GV + K ++A+K L + + + EE E ++ QL +
Sbjct: 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 69
Query: 478 RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYL 537
+V ++G C + + ML+ E L ++ KR + S E++ ++ G+ YL
Sbjct: 70 PYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYL 126
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAP 595
+ + +HRDL A NVLL KISDFG+++ G D T R G + + AP
Sbjct: 127 EEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARSAGKWPLKWYAP 182
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEII 620
E FS++SDV+S+GV + E +
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEAL 207
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 24/221 (10%)
Query: 410 PVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT 467
P+ D+ N F K+GEG +G VYK + G+ +A+K++ + +G+
Sbjct: 2 PLVDMEN-------FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI 54
Query: 468 -EIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKR 523
EI+L+ +L H N+V +L E + L++E+L K +D L+ S
Sbjct: 55 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYL 113
Query: 524 FEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENT 583
F+++ G+A + H R++HRDLK N+L++ K++DFG+AR FG + T
Sbjct: 114 FQLLQGLA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYT 165
Query: 584 NRVVGTYGYMAPEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
+ VV T Y APE + +ST D++S G + E++ R
Sbjct: 166 HEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 113/228 (49%), Gaps = 33/228 (14%)
Query: 422 NDFSSDNKLGEGGFGSVYK----GVL--QNGKEIAVKRLSRSSGQGIE-EFKTEIALIAQ 474
N+ +GEG FG V++ G+L + +AVK L + ++ +F+ E AL+A+
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLL-----DWSKRFEI--- 526
+ N+V +LG C + L++EY+ L+ ++ + ++ D S R +
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 527 ----------IC---GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR- 572
+C +A G+ YL S + +HRDL N L+ M KI+DFG++R
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 573 IFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
I+ D + + N + +M PE ++T+SDV+++GV+L EI
Sbjct: 224 IYSADYYKADGNDAIPI-RWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 136/304 (44%), Gaps = 44/304 (14%)
Query: 419 AATNDFSSDNKLGEGGFGSVY----KGVLQNGKE--IAVKRLSRSSGQGIE-EFKTEIAL 471
A + +LG+G FG VY KGV+++ E +A+K ++ ++ EF E ++
Sbjct: 7 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 66
Query: 472 IAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLL------------D 519
+ + ++V +LG + Q ++I E + L Y+ RSL
Sbjct: 67 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMENNPVLAPPS 121
Query: 520 WSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQI 579
SK ++ IA G+ YL+ + + +HRDL A N ++ KI DFGM R
Sbjct: 122 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX 178
Query: 580 EENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNL 639
+ + +M+PE +G+F+T SDV+SFGV+L EI T + G N
Sbjct: 179 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA------TLAEQPYQGLSN- 231
Query: 640 VGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLGS 699
V EG ++ D +C P++L + L +C Q RP+ ++S +
Sbjct: 232 -EQVLRFVMEGGLLDKPD-----NC--PDML--LELMRMCWQYNPKMRPSFLEIISSIKE 281
Query: 700 DNAP 703
+ P
Sbjct: 282 EMEP 285
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 423 DFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLS---RSSGQGIEEFKTEIALIAQLQHR 478
+F + K+G G F VY+ L +G +A+K++ + + EI L+ QL H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYI--FDEAKRSLLDWS--KRFEIICGIARGI 534
N++ IE+ E ++ E L I F + KR + + + K F +C
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE-- 150
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMA 594
H SR R++HRD+K +NV + A K+ D G+ R F ++ +VGT YM+
Sbjct: 151 ---HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMS 204
Query: 595 PEYAMEGLFSTKSDVYSFGVLLLEI 619
PE E ++ KSD++S G LL E+
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQHR 478
+F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 479 NLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA---- 124
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
+ H R++HRDLK N+L++ K++DFG+AR FG + T+ VV T Y AP
Sbjct: 125 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 179
Query: 596 EYAM-EGLFSTKSDVYSFGVLLLEIILGR 623
E + +ST D++S G + E++ R
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 27/220 (12%)
Query: 419 AATNDFSSDNKLGEGGFGSVY----KGVLQNGKE--IAVKRLSRSSGQGIE-EFKTEIAL 471
A + +LG+G FG VY KGV+++ E +A+K ++ ++ EF E ++
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 472 IAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLL------------D 519
+ + ++V +LG + Q ++I E + L Y+ RSL
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMENNPVLAPPS 130
Query: 520 WSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQI 579
SK ++ IA G+ YL+ + + +HRDL A N ++ KI DFGM R
Sbjct: 131 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX 187
Query: 580 EENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEI 619
+ + +M+PE +G+F+T SDV+SFGV+L EI
Sbjct: 188 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 140/294 (47%), Gaps = 36/294 (12%)
Query: 429 KLGEGGFGSVYKG----VLQNGKE--IAVKRLSRSSG-QGIEEFKTEIALIAQLQHRNLV 481
+LG+G FG VY+G +++ E +AVK ++ S+ + EF E +++ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFD---EAK----RSLLDWSKRFEIICGIARGI 534
+LG + Q +++ E + + L Y+ EA+ R + ++ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNRVVGTYGYM 593
YL+ + +HRDL A N ++ KI DFGM R I+ D + ++ +M
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WM 199
Query: 594 APEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAM 653
APE +G+F+T SD++SFGV+L EI + QG + ++ V D G +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEIT----SLAEQPYQGLSNEQVLKFVMD----GGYL 251
Query: 654 EAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLGSDNAPSSPK 707
+ D +C PE R L +C Q RP +V++L D PS P+
Sbjct: 252 DQPD-----NC--PE--RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE 296
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 98/205 (47%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG +G V V + +E +AVK + + + E K EI + A L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 132/291 (45%), Gaps = 43/291 (14%)
Query: 430 LGEGGFGSVYKGVLQ-----NGKEIAVKRLSRSSG-QGIEEFKTEIALIAQLQHRNLVSI 483
LGEG FG V G+ +AVK L G Q +K EI ++ L H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 484 LGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
GCC ++ EK L+ EY+P SL Y+ R + ++ I G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHSQ- 136
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGD--QIEENTNRVVGTYGYMAPEY 597
IHR+L A NVLLD KI DFG+A+ G + ++ E+ + V Y APE
Sbjct: 137 --HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY---APEC 191
Query: 598 AMEGLFSTKSDVYSFGVLLLEIIL----GRRNNTFHLE-----QGSGSWNLVGHVWDLWK 648
E F SDV+SFGV L E++ + T LE QG + V + +L +
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMT---VLRLTELLE 248
Query: 649 EGTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLGS 699
G + DK C E+ HL C + +A+ RP ++ +L +
Sbjct: 249 RGERLPRPDK------CPCEV---YHLMKNCWETEASFRPTFENLIPILKT 290
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 132/291 (45%), Gaps = 43/291 (14%)
Query: 430 LGEGGFGSVYKGVLQ-----NGKEIAVKRLSRSSG-QGIEEFKTEIALIAQLQHRNLVSI 483
LGEG FG V G+ +AVK L G Q +K EI ++ L H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 484 LGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
GCC ++ EK L+ EY+P SL Y+ R + ++ I G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHAQ- 136
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGD--QIEENTNRVVGTYGYMAPEY 597
IHR+L A NVLLD KI DFG+A+ G + ++ E+ + V Y APE
Sbjct: 137 --HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY---APEC 191
Query: 598 AMEGLFSTKSDVYSFGVLLLEIIL----GRRNNTFHLE-----QGSGSWNLVGHVWDLWK 648
E F SDV+SFGV L E++ + T LE QG + V + +L +
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMT---VLRLTELLE 248
Query: 649 EGTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLGS 699
G + DK C E+ HL C + +A+ RP ++ +L +
Sbjct: 249 RGERLPRPDK------CPCEV---YHLMKNCWETEASFRPTFENLIPILKT 290
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQHR 478
+F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 479 NLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA---- 117
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
+ H R++HRDLK N+L++ K++DFG+AR FG + T+ VV T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 172
Query: 596 EYAM-EGLFSTKSDVYSFGVLLLEIILGR 623
E + +ST D++S G + E++ R
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 115/238 (48%), Gaps = 32/238 (13%)
Query: 405 NSEYLPVFDL---SNIAAATNDFSSDNKLGEGGFGSVY----KGVLQNGKE--IAVKRLS 455
N EY D+ A + +LG+G FG VY KGV+++ E +A+K ++
Sbjct: 5 NPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN 64
Query: 456 RSSGQGIE-EFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAK 514
++ EF E +++ + ++V +LG + Q ++I E + L Y+
Sbjct: 65 EAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----- 119
Query: 515 RSLL------------DWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMN 562
RSL SK ++ IA G+ YL+ + + +HRDL A N ++
Sbjct: 120 RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFT 176
Query: 563 PKISDFGMAR-IFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEI 619
KI DFGM R I+ D + ++ +M+PE +G+F+T SDV+SFGV+L EI
Sbjct: 177 VKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 21/204 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
LG+G +G VY G L N IA+K + + + EIAL L+H+N+V LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 489 EEQEKMLIYEYLPNKSLDVYI------FDEAKRSLLDWSKRFEIICGIARGILYLHQDSR 542
E + E +P SL + + ++++ ++K+ I G+ YLH +
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ------ILEGLKYLHDN-- 141
Query: 543 LRIIHRDLKASNVLLDAAMNP-KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
+I+HRD+K NVL++ KISDFG ++ G I T GT YMAPE +G
Sbjct: 142 -QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKG 198
Query: 602 L--FSTKSDVYSFGVLLLEIILGR 623
+ +D++S G ++E+ G+
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGK 222
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 38/280 (13%)
Query: 430 LGEGGFGSVYKGVLQ--NGKEIAVKRLSRSSG---QGIEEFKTEIALIAQLQHRNLVSIL 484
+G G FG V G L+ +EI V + SG + +F +E +++ Q H N++ +
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIF-DEAKRSLLDWSKRFEIICGIARGILYLHQDSRL 543
G + M+I E++ N SLD ++ ++ + +++ + ++ GIA G+ YL + +
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL---ADM 154
Query: 544 RIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG---TYGYMAPEYAME 600
+HRDL A N+L+++ + K+SDFG++R D + +G + APE
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 214
Query: 601 GLFSTKSDVYSFGVLLLEII-LGRRNNTFHLEQGSGSWNLVGHVWDLWKEGT--AMEAVD 657
F++ SDV+S+G+++ E++ G R WD+ + A+E D
Sbjct: 215 RKFTSASDVWSYGIVMWEVMSYGERP-----------------YWDMTNQDVINAIEQ-D 256
Query: 658 KSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
L P L L L C Q+ RP +V+ L
Sbjct: 257 YRLPPPMDCPSALH--QLMLDCWQKDRNHRPKFGQIVNTL 294
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 115/238 (48%), Gaps = 32/238 (13%)
Query: 405 NSEYLPVFDL---SNIAAATNDFSSDNKLGEGGFGSVY----KGVLQNGKE--IAVKRLS 455
N EY D+ A + +LG+G FG VY KGV+++ E +A+K ++
Sbjct: 5 NPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN 64
Query: 456 RSSGQGIE-EFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAK 514
++ EF E +++ + ++V +LG + Q ++I E + L Y+
Sbjct: 65 EAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----- 119
Query: 515 RSLL------------DWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMN 562
RSL SK ++ IA G+ YL+ + + +HRDL A N ++
Sbjct: 120 RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFT 176
Query: 563 PKISDFGMAR-IFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEI 619
KI DFGM R I+ D + ++ +M+PE +G+F+T SDV+SFGV+L EI
Sbjct: 177 VKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 136/293 (46%), Gaps = 34/293 (11%)
Query: 429 KLGEGGFGSVYKG----VLQNGKE--IAVKRLSRSSG-QGIEEFKTEIALIAQLQHRNLV 481
+LG+G FG VY+G +++ E +AVK ++ S+ + EF E +++ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFD---EAK----RSLLDWSKRFEIICGIARGI 534
+LG + Q +++ E + + L Y+ EA+ R + ++ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMA 594
YL+ + +HRDL A N ++ KI DFGM R + + +MA
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 595 PEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAME 654
PE +G+F+T SD++SFGV+L EI + QG + ++ V D G ++
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEIT----SLAEQPYQGLSNEQVLKFVMD----GGYLD 252
Query: 655 AVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLGSDNAPSSPK 707
D +C PE R L +C Q RP +V++L D PS P+
Sbjct: 253 QPD-----NC--PE--RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE 296
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 110/211 (52%), Gaps = 17/211 (8%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARG 533
H N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 118
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYM 593
+ H R++HRDLK N+L++ K++DFG+AR FG + T+ VV T Y
Sbjct: 119 --FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYR 171
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
APE + +ST D++S G + E++ R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQHR 478
+F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 479 NLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA---- 124
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
+ H R++HRDLK N+L++ K++DFG+AR FG + T+ VV T Y AP
Sbjct: 125 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 179
Query: 596 EYAME-GLFSTKSDVYSFGVLLLEIILGR 623
E + +ST D++S G + E++ R
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQHR 478
+F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 479 NLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA---- 117
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
+ H R++HRDLK N+L++ K++DFG+AR FG + T+ VV T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 172
Query: 596 EYAME-GLFSTKSDVYSFGVLLLEIILGR 623
E + +ST D++S G + E++ R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNG---KEIAVKRLSR-SSGQGIEEFKTEIALIAQL-Q 476
ND + +GEG FG V K ++ + A+KR+ +S +F E+ ++ +L
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSL-------------DVYIFDEAKRSLLDWSKR 523
H N++++LG C L EY P+ +L + + S L +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 524 FEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENT 583
+ARG+ YL Q + IHRDL A N+L+ KI+DFG++R G ++
Sbjct: 135 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK 188
Query: 584 NRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E +++T SDV+S+GVLL EI+
Sbjct: 189 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 225
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQHR 478
+F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 479 NLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA---- 117
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
+ H R++HRDLK N+L++ K++DFG+AR FG + T+ VV T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 172
Query: 596 EYAME-GLFSTKSDVYSFGVLLLEIILGR 623
E + +ST D++S G + E++ R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQHR 478
+F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 479 NLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA---- 116
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
+ H R++HRDLK N+L++ K++DFG+AR FG + T+ VV T Y AP
Sbjct: 117 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 171
Query: 596 EYAME-GLFSTKSDVYSFGVLLLEIILGR 623
E + +ST D++S G + E++ R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 29/229 (12%)
Query: 411 VFDLSNIAAATNDFSSDNKLGEGGFGSVY----KGVLQNGKE--IAVKRLSRSSGQGIE- 463
VF A + +LG+G FG VY KGV+++ E +A+K ++ ++
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 464 EFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLL----- 518
EF E +++ + ++V +LG + Q ++I E + L Y+ RSL
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMEN 119
Query: 519 -------DWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMA 571
SK ++ IA G+ YL+ + + +HRDL A N ++ KI DFGM
Sbjct: 120 NPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 176
Query: 572 R-IFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEI 619
R I+ D + ++ +M+PE +G+F+T SDV+SFGV+L EI
Sbjct: 177 RDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQHR 478
+F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 479 NLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA---- 116
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
+ H R++HRDLK N+L++ K++DFG+AR FG + T+ VV T Y AP
Sbjct: 117 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 171
Query: 596 EYAME-GLFSTKSDVYSFGVLLLEIILGR 623
E + +ST D++S G + E++ R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 29/221 (13%)
Query: 419 AATNDFSSDNKLGEGGFGSVY----KGVLQNGKE--IAVKRLSRSSGQGIE-EFKTEIAL 471
A + +LG+G FG VY KGV+++ E +A+K ++ ++ EF E ++
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 472 IAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLL------------D 519
+ + ++V +LG + Q ++I E + L Y+ RSL
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMENNPVLAPPS 123
Query: 520 WSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQ 578
SK ++ IA G+ YL+ + + +HRDL A N ++ KI DFGM R I+ D
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 180
Query: 579 IEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEI 619
+ ++ +M+PE +G+F+T SDV+SFGV+L EI
Sbjct: 181 YRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 21/204 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
LG+G +G VY G L N IA+K + + + EIAL L+H+N+V LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 489 EEQEKMLIYEYLPNKSLDVYI------FDEAKRSLLDWSKRFEIICGIARGILYLHQDSR 542
E + E +P SL + + ++++ ++K+ I G+ YLH +
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ------ILEGLKYLHDN-- 127
Query: 543 LRIIHRDLKASNVLLDAAMNP-KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
+I+HRD+K NVL++ KISDFG ++ G I T GT YMAPE +G
Sbjct: 128 -QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKG 184
Query: 602 L--FSTKSDVYSFGVLLLEIILGR 623
+ +D++S G ++E+ G+
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGK 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 98/208 (47%), Gaps = 9/208 (4%)
Query: 418 AAATNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQL 475
A D+ LGEG +G V V + +E +AVK + + + E K EI + L
Sbjct: 1 APFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 60
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
H N+V G E + L EY L I + D + F + G++
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 117
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
YLH + I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+AP
Sbjct: 118 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 596 EYAMEGLFSTKS-DVYSFGVLLLEIILG 622
E F + DV+S G++L ++ G
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 140/294 (47%), Gaps = 36/294 (12%)
Query: 429 KLGEGGFGSVYKG----VLQNGKE--IAVKRLSRSSG-QGIEEFKTEIALIAQLQHRNLV 481
+LG+G FG VY+G +++ E +AVK ++ S+ + EF E +++ ++V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFD---EAK----RSLLDWSKRFEIICGIARGI 534
+LG + Q +++ E + + L Y+ EA+ R + ++ IA G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNRVVGTYGYM 593
YL+ + +HRDL A N ++ KI DFGM R I+ D + ++ +M
Sbjct: 143 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WM 198
Query: 594 APEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAM 653
APE +G+F+T SD++SFGV+L EI + QG + ++ V D G +
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEIT----SLAEQPYQGLSNEQVLKFVMD----GGYL 250
Query: 654 EAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLGSDNAPSSPK 707
+ D +C PE R L +C Q RP +V++L D PS P+
Sbjct: 251 DQPD-----NC--PE--RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE 295
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 115/238 (48%), Gaps = 32/238 (13%)
Query: 405 NSEYLPVFDL---SNIAAATNDFSSDNKLGEGGFGSVY----KGVLQNGKE--IAVKRLS 455
N EY D+ A + +LG+G FG VY KGV+++ E +A+K ++
Sbjct: 27 NPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN 86
Query: 456 RSSGQGIE-EFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAK 514
++ EF E +++ + ++V +LG + Q ++I E + L Y+
Sbjct: 87 EAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----- 141
Query: 515 RSLL------------DWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMN 562
RSL SK ++ IA G+ YL+ + + +HRDL A N ++
Sbjct: 142 RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFT 198
Query: 563 PKISDFGMAR-IFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEI 619
KI DFGM R I+ D + ++ +M+PE +G+F+T SDV+SFGV+L EI
Sbjct: 199 VKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 430 LGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
LGEG +G V V + +E +AVK + + + E K EI + L H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
E + L EY L I + D + F + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IGITH 127
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKS 607
RD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 608 -DVYSFGVLLLEIILG 622
DV+S G++L ++ G
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 29/221 (13%)
Query: 419 AATNDFSSDNKLGEGGFGSVY----KGVLQNGKE--IAVKRLSRSSGQGIE-EFKTEIAL 471
A + +LG+G FG VY KGV+++ E +A+K ++ ++ EF E ++
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 472 IAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLL------------D 519
+ + ++V +LG + Q ++I E + L Y+ RSL
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMENNPVLAPPS 129
Query: 520 WSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQ 578
SK ++ IA G+ YL+ + + +HRDL A N ++ KI DFGM R I+ D
Sbjct: 130 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 579 IEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEI 619
+ ++ +M+PE +G+F+T SDV+SFGV+L EI
Sbjct: 187 YRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 29/221 (13%)
Query: 419 AATNDFSSDNKLGEGGFGSVY----KGVLQNGKE--IAVKRLSRSSGQGIE-EFKTEIAL 471
A + +LG+G FG VY KGV+++ E +A+K ++ ++ EF E ++
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 472 IAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLL------------D 519
+ + ++V +LG + Q ++I E + L Y+ RSL
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMENNPVLAPPS 129
Query: 520 WSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQ 578
SK ++ IA G+ YL+ + + +HRDL A N ++ KI DFGM R I+ D
Sbjct: 130 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 579 IEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEI 619
+ ++ +M+PE +G+F+T SDV+SFGV+L EI
Sbjct: 187 YRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 112/213 (52%), Gaps = 21/213 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSL-----LDWSKRFEIICGIA 531
H N+V +L E + L++E+L S+D+ F +A L S F+++ G+A
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T
Sbjct: 121 ----FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLW 171
Query: 592 YMAPEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
Y APE + +ST D++S G + E++ R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 29/221 (13%)
Query: 419 AATNDFSSDNKLGEGGFGSVY----KGVLQNGKE--IAVKRLSRSSGQGIE-EFKTEIAL 471
A + +LG+G FG VY KGV+++ E +A+K ++ ++ EF E ++
Sbjct: 12 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 71
Query: 472 IAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLL------------D 519
+ + ++V +LG + Q ++I E + L Y+ RSL
Sbjct: 72 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPAMANNPVLAPPS 126
Query: 520 WSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQ 578
SK ++ IA G+ YL+ + + +HRDL A N ++ KI DFGM R I+ D
Sbjct: 127 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 183
Query: 579 IEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEI 619
+ ++ +M+PE +G+F+T SDV+SFGV+L EI
Sbjct: 184 YRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 13/205 (6%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGK---EIAVKRLSRSSGQG-IEEFKTEIALIAQLQH 477
N +D +LG G FGSV +GV + K ++A+K L + + + EE E ++ QL +
Sbjct: 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 395
Query: 478 RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYL 537
+V ++G C + + ML+ E L ++ KR + S E++ ++ G+ YL
Sbjct: 396 PYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYL 452
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY--GYMAP 595
+ + +HR+L A NVLL KISDFG+++ G D T R G + + AP
Sbjct: 453 EEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARSAGKWPLKWYAP 508
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEII 620
E FS++SDV+S+GV + E +
Sbjct: 509 ECINFRKFSSRSDVWSYGVTMWEAL 533
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 430 LGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
LGEG +G V V + +E +AVK + + + E K EI + L H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
E + L EY L I + D + F + G++YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IGITH 128
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKS 607
RD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE F +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 608 -DVYSFGVLLLEIILG 622
DV+S G++L ++ G
Sbjct: 189 VDVWSCGIVLTAMLAG 204
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNG---KEIAVKRLSR-SSGQGIEEFKTEIALIAQL-Q 476
ND + +GEG FG V K ++ + A+KR+ +S +F E+ ++ +L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSL-------------DVYIFDEAKRSLLDWSKR 523
H N++++LG C L EY P+ +L + + S L +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 524 FEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENT 583
+ARG+ YL Q + IHRDL A N+L+ KI+DFG++R G ++
Sbjct: 145 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK 198
Query: 584 NRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E +++T SDV+S+GVLL EI+
Sbjct: 199 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 36/249 (14%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRL-SRSSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K ++AVK L S ++ + + + +E+ ++ + +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----------FDEAKRSLLDWSKRFEIIC 528
++++LG C ++ +I EY +L Y+ ++ + S + + C
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 529 G--IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWD 645
+ +MAPE + +++ +SDV+SFGVLL EI F L V ++
Sbjct: 198 RLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEI--------FTLGGSPYPGVPVEELFK 248
Query: 646 LWKEGTAME 654
L KEG M+
Sbjct: 249 LLKEGHRMD 257
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 29/221 (13%)
Query: 419 AATNDFSSDNKLGEGGFGSVY----KGVLQNGKE--IAVKRLSRSSGQGIE-EFKTEIAL 471
A + +LG+G FG VY KGV+++ E +A+K ++ ++ EF E ++
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 472 IAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLL------------D 519
+ + ++V +LG + Q ++I E + L Y+ RSL
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMENNPVLAPPS 130
Query: 520 WSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQ 578
SK ++ IA G+ YL+ + + +HRDL A N ++ KI DFGM R I+ D
Sbjct: 131 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 187
Query: 579 IEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEI 619
+ ++ +M+PE +G+F+T SDV+SFGV+L EI
Sbjct: 188 YRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 112/213 (52%), Gaps = 21/213 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSL-----LDWSKRFEIICGIA 531
H N+V +L E + L++E+L S+D+ F +A L S F+++ G+A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T
Sbjct: 119 ----FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLW 169
Query: 592 YMAPEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
Y APE + +ST D++S G + E++ R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
Y H R+IHRD+K N+LL +A KI+DFG + + E + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTE----LCGTLDYLPP 175
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGR 623
E + K D++S GVL E ++G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY +N K I A+K L ++ + G+E + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H ++IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLDY 172
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 111/215 (51%), Gaps = 28/215 (13%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRL-SRSSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K ++AVK L S ++ + + + +E+ ++ + +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----------FDEAKRSLLDWSKRFEIIC 528
++++LG C ++ +I EY +L Y+ ++ + S + + C
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 529 G--IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+ +MAPE + +++ +SDV+SFGVLL EI
Sbjct: 202 RLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIF 235
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 36/249 (14%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRL-SRSSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K ++AVK L S ++ + + + +E+ ++ + +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----------FDEAKRSLLDWSKRFEIIC 528
++++LG C ++ +I EY +L Y+ ++ + S + + C
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 529 G--IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWD 645
+ +MAPE + +++ +SDV+SFGVLL EI F L V ++
Sbjct: 254 RLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEI--------FTLGGSPYPGVPVEELFK 304
Query: 646 LWKEGTAME 654
L KEG M+
Sbjct: 305 LLKEGHRMD 313
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 111/215 (51%), Gaps = 28/215 (13%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRL-SRSSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K ++AVK L S ++ + + + +E+ ++ + +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----------FDEAKRSLLDWSKRFEIIC 528
++++LG C ++ +I EY +L Y+ ++ + S + + C
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 529 G--IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+ +MAPE + +++ +SDV+SFGVLL EI
Sbjct: 205 RLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIF 238
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 54/295 (18%)
Query: 430 LGEGGFGSVYKGVLQNGK------EIAVKRLSR-SSGQGIEEFKTEIALIAQLQHRNLVS 482
LGEG FG V K + K +AVK L +S + + +E ++ Q+ H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAK-------------RSLLDWSKRFEIICG 529
+ G C ++ +LI EY SL ++ + K S LD + G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 530 --------IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQ-I 579
I++G+ YL + ++++HRDL A N+L+ KISDFG++R ++ D +
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 580 EENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLEQGSGSWN 638
+ + R+ +MA E + +++T+SDV+SFGVLL EI+ LG N + +N
Sbjct: 208 KRSQGRI--PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG--GNPYPGIPPERLFN 263
Query: 639 LVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
L+ K G ME D C+ E+ R L L C +++ RP + +
Sbjct: 264 LL-------KTGHRMERPDN------CSEEMYR---LMLQCWKQEPDKRPVFADI 302
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 54/295 (18%)
Query: 430 LGEGGFGSVYKGVLQNGK------EIAVKRLSR-SSGQGIEEFKTEIALIAQLQHRNLVS 482
LGEG FG V K + K +AVK L +S + + +E ++ Q+ H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAK-------------RSLLDWSKRFEIICG 529
+ G C ++ +LI EY SL ++ + K S LD + G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 530 --------IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQ-I 579
I++G+ YL + ++++HRDL A N+L+ KISDFG++R ++ D +
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 580 EENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLEQGSGSWN 638
+ + R+ +MA E + +++T+SDV+SFGVLL EI+ LG N + +N
Sbjct: 208 KRSQGRI--PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG--GNPYPGIPPERLFN 263
Query: 639 LVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
L+ K G ME D C+ E+ R L L C +++ RP + +
Sbjct: 264 LL-------KTGHRMERPDN------CSEEMYR---LMLQCWKQEPDKRPVFADI 302
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 29/206 (14%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLS-RSSGQGIEEFKT-EIALIAQLQHRNLVSILGC 486
K+GEG +G VYK G+ A+K++ +GI EI+++ +L+H N+V +
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 487 CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLD---------WSKRFEIICGIARGILYL 537
++ +L++E+L D+ + LLD +K F + + GI Y
Sbjct: 69 IHTKKRLVLVFEHL----------DQDLKKLLDVCEGGLESVTAKSF--LLQLLNGIAYC 116
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEY 597
H R++HRDLK N+L++ KI+DFG+AR F G + + T+ VV T Y AP+
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAPDV 171
Query: 598 AM-EGLFSTKSDVYSFGVLLLEIILG 622
M +ST D++S G + E++ G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 36/249 (14%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRL-SRSSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K ++AVK L S ++ + + + +E+ ++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----------FDEAKRSLLDWSKRFEIIC 528
++++LG C ++ +I EY +L Y+ ++ + S + + C
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 529 G--IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWD 645
+ +MAPE + +++ +SDV+SFGVLL EI F L V ++
Sbjct: 213 RLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEI--------FTLGGSPYPGVPVEELFK 263
Query: 646 LWKEGTAME 654
L KEG M+
Sbjct: 264 LLKEGHRMD 272
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 198
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 29/206 (14%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLS-RSSGQGIEEFKT-EIALIAQLQHRNLVSILGC 486
K+GEG +G VYK G+ A+K++ +GI EI+++ +L+H N+V +
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 487 CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLD---------WSKRFEIICGIARGILYL 537
++ +L++E+L D+ + LLD +K F + + GI Y
Sbjct: 69 IHTKKRLVLVFEHL----------DQDLKKLLDVCEGGLESVTAKSF--LLQLLNGIAYC 116
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEY 597
H R++HRDLK N+L++ KI+DFG+AR F G + + T+ VV T Y AP+
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAPDV 171
Query: 598 AM-EGLFSTKSDVYSFGVLLLEIILG 622
M +ST D++S G + E++ G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
Y H R+IHRD+K N+LL +A KI+DFG + + + GT Y+ P
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPP 201
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGR 623
E + K D++S GVL E ++G+
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 112/213 (52%), Gaps = 21/213 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSL-----LDWSKRFEIICGIA 531
H N+V +L E + L++E+L S+D+ F +A L S F+++ G+A
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T
Sbjct: 120 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLW 170
Query: 592 YMAPEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
Y APE + +ST D++S G + E++ R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 112/213 (52%), Gaps = 21/213 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSL-----LDWSKRFEIICGIA 531
H N+V +L E + L++E+L S+D+ F +A L S F+++ G+A
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T
Sbjct: 121 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLW 171
Query: 592 YMAPEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
Y APE + +ST D++S G + E++ R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 17/209 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQHR 478
+F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSL---LDWSKRFEIICGIARGIL 535
N+V +L E + L++E++ ++ L ++ A + L S F+++ G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA---- 116
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
+ H R++HRDLK N+L++ K++DFG+AR FG + T+ VV T Y AP
Sbjct: 117 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 171
Query: 596 EYAME-GLFSTKSDVYSFGVLLLEIILGR 623
E + +ST D++S G + E++ R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 111/215 (51%), Gaps = 28/215 (13%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRL-SRSSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K ++AVK L S ++ + + + +E+ ++ + +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----------FDEAKRSLLDWSKRFEIIC 528
++++LG C ++ +I EY +L Y+ ++ + S + + C
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 529 G--IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+ +MAPE + +++ +SDV+SFGVLL EI
Sbjct: 206 RLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIF 239
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 111/215 (51%), Gaps = 28/215 (13%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRL-SRSSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K ++AVK L S ++ + + + +E+ ++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----------FDEAKRSLLDWSKRFEIIC 528
++++LG C ++ +I EY +L Y+ ++ + S + + C
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 529 G--IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+ +MAPE + +++ +SDV+SFGVLL EI
Sbjct: 213 RLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
Y H R+IHRD+K N+LL +A KI+DFG + + + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLPP 176
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGR 623
E + K D++S GVL E ++G+
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 111/215 (51%), Gaps = 28/215 (13%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRL-SRSSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K ++AVK L S ++ + + + +E+ ++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----------FDEAKRSLLDWSKRFEIIC 528
++++LG C ++ +I EY +L Y+ ++ + S + + C
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 529 G--IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+ +MAPE + +++ +SDV+SFGVLL EI
Sbjct: 213 RLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 172
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 141/320 (44%), Gaps = 48/320 (15%)
Query: 405 NSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYK----GVLQNG--KEIAVKRLSRSS 458
++E LP +D S + LG G FG V + G+ + + +AVK L +
Sbjct: 2 HAERLP-YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 60
Query: 459 GQGIEE-FKTEIALIAQL-QHRNLVSILGCCIEEQ-EKMLIYEYLPNKSLDVYI------ 509
+E+ ++ + H N+V++LG C + M+I E+ +L Y+
Sbjct: 61 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 120
Query: 510 FDEAKRSLLDWSKRF----EIIC---GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMN 562
F K + D K F +IC +A+G+ +L + + IHRDL A N+LL
Sbjct: 121 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV 177
Query: 563 PKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
KI DFG+AR D +MAPE + +++ +SDV+SFGVLL EI
Sbjct: 178 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI--- 234
Query: 623 RRNNTFHLEQGSGSWNLVG---HVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLC 679
F L G+ + V KEGT M A D + PE+ + + L C
Sbjct: 235 -----FSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYT------TPEMYQTM---LDC 278
Query: 680 VQEQATDRPNMSAVVSMLGS 699
+ + RP S +V LG+
Sbjct: 279 WHGEPSQRPTFSELVEHLGN 298
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 141/320 (44%), Gaps = 48/320 (15%)
Query: 405 NSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYK----GVLQNG--KEIAVKRLSRSS 458
++E LP +D S + LG G FG V + G+ + + +AVK L +
Sbjct: 2 HAERLP-YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 60
Query: 459 GQGIEE-FKTEIALIAQL-QHRNLVSILGCCIEEQ-EKMLIYEYLPNKSLDVYI------ 509
+E+ ++ + H N+V++LG C + M+I E+ +L Y+
Sbjct: 61 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNE 120
Query: 510 FDEAKRSLLDWSKRF----EIIC---GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMN 562
F K + D K F +IC +A+G+ +L + + IHRDL A N+LL
Sbjct: 121 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV 177
Query: 563 PKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
KI DFG+AR D +MAPE + +++ +SDV+SFGVLL EI
Sbjct: 178 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI--- 234
Query: 623 RRNNTFHLEQGSGSWNLVG---HVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLC 679
F L G+ + V KEGT M A D + PE+ + + L C
Sbjct: 235 -----FSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYT------TPEMYQTM---LDC 278
Query: 680 VQEQATDRPNMSAVVSMLGS 699
+ + RP S +V LG+
Sbjct: 279 WHGEPSQRPTFSELVEHLGN 298
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 112/211 (53%), Gaps = 17/211 (8%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSL---LDWSKRFEIICGIARG 533
H N+V +L E + L++E+L ++ L ++ A + L S F+++ G+A
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA-- 120
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYM 593
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y
Sbjct: 121 --FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYR 173
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
APE + +ST D++S G + E++ R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG +G V V + +E +AVK + + + E K EI + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 140/294 (47%), Gaps = 36/294 (12%)
Query: 429 KLGEGGFGSVYKG----VLQNGKE--IAVKRLSRSSG-QGIEEFKTEIALIAQLQHRNLV 481
+LG+G FG VY+G +++ E +AVK ++ S+ + EF E +++ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFD---EAK----RSLLDWSKRFEIICGIARGI 534
+LG + Q +++ E + + L Y+ EA+ R + ++ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNRVVGTYGYM 593
YL+ + +HR+L A N ++ KI DFGM R I+ D + ++ +M
Sbjct: 144 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WM 199
Query: 594 APEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAM 653
APE +G+F+T SD++SFGV+L EI + QG + ++ V D G +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEIT----SLAEQPYQGLSNEQVLKFVMD----GGYL 251
Query: 654 EAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLGSDNAPSSPK 707
+ D +C PE R L +C Q RP +V++L D PS P+
Sbjct: 252 DQPD-----NC--PE--RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPE 296
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG +G V V + +E +AVK + + + E K EI + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG +G V V + +E +AVK + + + E K EI + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG +G V V + +E +AVK + + + E K EI + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG +G V V + +E +AVK + + + E K EI + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG +G V V + +E +AVK + + + E K EI + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG +G V V + +E +AVK + + + E K EI + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 29/206 (14%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLS-RSSGQGIEEFKT-EIALIAQLQHRNLVSILGC 486
K+GEG +G VYK G+ A+K++ +GI EI+++ +L+H N+V +
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 487 CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLD---------WSKRFEIICGIARGILYL 537
++ +L++E+L D+ + LLD +K F + + GI Y
Sbjct: 69 IHTKKRLVLVFEHL----------DQDLKKLLDVCEGGLESVTAKSF--LLQLLNGIAYC 116
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEY 597
H R++HRDLK N+L++ KI+DFG+AR F G + + T+ +V T Y AP+
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIV-TLWYRAPDV 171
Query: 598 AM-EGLFSTKSDVYSFGVLLLEIILG 622
M +ST D++S G + E++ G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 426 SDNKLGEGGFGSVYKGVL----QNGKEIAVKRLSR-SSGQGIEEFKTEIALIAQLQHRNL 480
SD +G+G FG VY G QN + A+K LSR + Q +E F E L+ L H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 481 VSILGCCIE-EQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQ 539
++++G + E ++ Y+ + L +I + + F + +ARG+ YL +
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL--QVARGMEYLAE 142
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNRVVG-TYGYMAPEY 597
+ +HRDL A N +LD + K++DFG+AR I + +R + A E
Sbjct: 143 Q---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES 199
Query: 598 AMEGLFSTKSDVYSFGVLLLEII 620
F+TKSDV+SFGVLL E++
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELL 222
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDY 177
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQHR 478
+F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 479 NLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
N+V +L E + L++E+L K +D L+ S F+++ G++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLS---- 117
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
+ H R++HRDLK N+L++ K++DFG+AR FG + T+ VV T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 172
Query: 596 EYAME-GLFSTKSDVYSFGVLLLEIILGR 623
E + +ST D++S G + E++ R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDY 173
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 140/294 (47%), Gaps = 36/294 (12%)
Query: 429 KLGEGGFGSVYKG----VLQNGKE--IAVKRLSRSSG-QGIEEFKTEIALIAQLQHRNLV 481
+LG+G FG VY+G +++ E +AVK ++ S+ + EF E +++ ++V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFD---EAK----RSLLDWSKRFEIICGIARGI 534
+LG + Q +++ E + + L Y+ EA+ R + ++ IA G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNRVVGTYGYM 593
YL+ + +HR+L A N ++ KI DFGM R I+ D + ++ +M
Sbjct: 145 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WM 200
Query: 594 APEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAM 653
APE +G+F+T SD++SFGV+L EI + QG + ++ V D G +
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEIT----SLAEQPYQGLSNEQVLKFVMD----GGYL 252
Query: 654 EAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLGSDNAPSSPK 707
+ D +C PE R L +C Q RP +V++L D PS P+
Sbjct: 253 DQPD-----NC--PE--RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPE 297
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 177
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 144/330 (43%), Gaps = 51/330 (15%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYK----GVLQNG--KE 448
D LD+ + E LP +D S + LG G FG V + G+ + +
Sbjct: 4 DELPLDE---HCERLP-YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRT 59
Query: 449 IAVKRLSRSSGQGIEE-FKTEIALIAQL-QHRNLVSILGCCIEEQ-EKMLIYEYLPNKSL 505
+AVK L + +E+ ++ + H N+V++LG C + M+I E+ +L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 506 DVYI------FDEAKRSLLDWSKRF----EIIC---GIARGILYLHQDSRLRIIHRDLKA 552
Y+ F K + D K F +IC +A+G+ +L + + IHRDL A
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 553 SNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSF 612
N+LL KI DFG+AR D +MAPE + +++ +SDV+SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 613 GVLLLEIILGRRNNTFHLEQGSGSWNLVG---HVWDLWKEGTAMEAVDKSLGESCCAPEI 669
GVLL EI F L G+ + V KEGT M A D + PE+
Sbjct: 237 GVLLWEI--------FSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYT------TPEM 280
Query: 670 LRCIHLGLLCVQEQATDRPNMSAVVSMLGS 699
+ + L C + + RP S +V LG+
Sbjct: 281 YQTM---LDCWHGEPSQRPTFSELVEHLGN 307
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 175
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLDY 175
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG +G V V + +E +AVK + + + E K EI + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG +G V V + +E +AVK + + + E K EI + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 140 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 189
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 139/305 (45%), Gaps = 46/305 (15%)
Query: 419 AATNDFSSDNKLGEGGFGSVY----KGVLQNGKE--IAVKRLSRSSGQGIE-EFKTEIAL 471
A + +LG+G FG VY KGV+++ E +A+K ++ ++ EF E ++
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 472 IAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLL------------D 519
+ + ++V +LG + Q ++I E + L Y+ RSL
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-----RSLRPEMENNPVLAPPS 123
Query: 520 WSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQ 578
SK ++ IA G+ YL+ + + +HRDL A N + KI DFGM R I+ D
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDY 180
Query: 579 IEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWN 638
+ ++ +M+PE +G+F+T SDV+SFGV+L EI T + G N
Sbjct: 181 YRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIA------TLAEQPYQGLSN 233
Query: 639 LVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLG 698
V EG ++ D +C P++L + L +C Q RP+ ++S +
Sbjct: 234 --EQVLRFVMEGGLLDKPD-----NC--PDML--LELMRMCWQYNPKMRPSFLEIISSIK 282
Query: 699 SDNAP 703
+ P
Sbjct: 283 EEMEP 287
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG +G V V + +E +AVK + + + E K EI + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDY 172
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG +G V V + +E +AVK + + + E K EI + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDY 172
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
Y H R+IHRD+K N+LL +A KI+DFG + + + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPP 178
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGR 623
E + K D++S GVL E ++G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG +G V V + +E +AVK + + + E K EI + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG +G V V + +E +AVK + + + E K EI + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDY 174
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG +G V V + +E +AVK + + + E K EI + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P +VY + K S D + I +A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRG--EVYK-ELQKLSKFDEQRTATYITELANALS 127
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 177
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 126
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 176
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG +G V V + +E +AVK + + + E K EI + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 109/201 (54%), Gaps = 20/201 (9%)
Query: 430 LGEGGFGSVYKGV-LQNGKEI----AVKRLSR-SSGQGIEEFKTEIALIAQLQHRNLVSI 483
LG G FG+VYKG+ + +G+ + A+K L +S + +E E ++A + + +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 484 LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR----SLLDWSKRFEIICGIARGILYLHQ 539
LG C+ + L+ + +P L ++ + R LL+W + IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMSYLED 137
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM 599
+R++HRDL A NVL+ + + KI+DFG+AR+ D+ E + + +MA E +
Sbjct: 138 ---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 194
Query: 600 EGLFSTKSDVYSFGVLLLEII 620
F+ +SDV+S+GV + E++
Sbjct: 195 RRRFTHQSDVWSYGVTVWELM 215
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG +G V V + +E +AVK + + + E K EI + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
Y H R+IHRD+K N+LL +A KI+DFG + + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPP 175
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGR 623
E + K D++S GVL E ++G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
Y H R+IHRD+K N+LL +A KI+DFG + + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLPP 176
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGR 623
E + K D++S GVL E ++G+
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 144/330 (43%), Gaps = 51/330 (15%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYK----GVLQNG--KE 448
D LD+ + E LP +D S + LG G FG V + G+ + +
Sbjct: 6 DELPLDE---HCERLP-YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRT 61
Query: 449 IAVKRLSRSSGQGIEE-FKTEIALIAQL-QHRNLVSILGCCIEEQ-EKMLIYEYLPNKSL 505
+AVK L + +E+ ++ + H N+V++LG C + M+I E+ +L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 506 DVYI------FDEAKRSLLDWSKRF----EIIC---GIARGILYLHQDSRLRIIHRDLKA 552
Y+ F K + D K F +IC +A+G+ +L + + IHRDL A
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 178
Query: 553 SNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSF 612
N+LL KI DFG+AR D +MAPE + +++ +SDV+SF
Sbjct: 179 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 238
Query: 613 GVLLLEIILGRRNNTFHLEQGSGSWNLVG---HVWDLWKEGTAMEAVDKSLGESCCAPEI 669
GVLL EI F L G+ + V KEGT M A D + PE+
Sbjct: 239 GVLLWEI--------FSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYT------TPEM 282
Query: 670 LRCIHLGLLCVQEQATDRPNMSAVVSMLGS 699
+ + L C + + RP S +V LG+
Sbjct: 283 YQTM---LDCWHGEPSQRPTFSELVEHLGN 309
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 122 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 171
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P +VY + K S D + I +A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRG--EVYK-ELQKLSKFDEQRTATYITELANALS 127
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLXGTLDY 177
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 17/211 (8%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARG 533
H N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 119
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYM 593
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y
Sbjct: 120 --FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYR 172
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
APE + +ST D++S G + E++ R
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 144/330 (43%), Gaps = 51/330 (15%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYK----GVLQNG--KE 448
D LD+ + E LP +D S + LG G FG V + G+ + +
Sbjct: 4 DELPLDE---HCERLP-YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRT 59
Query: 449 IAVKRLSRSSGQGIEE-FKTEIALIAQL-QHRNLVSILGCCIEEQ-EKMLIYEYLPNKSL 505
+AVK L + +E+ ++ + H N+V++LG C + M+I E+ +L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 506 DVYI------FDEAKRSLLDWSKRF----EIIC---GIARGILYLHQDSRLRIIHRDLKA 552
Y+ F K + D K F +IC +A+G+ +L + + IHRDL A
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 553 SNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSF 612
N+LL KI DFG+AR D +MAPE + +++ +SDV+SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 613 GVLLLEIILGRRNNTFHLEQGSGSWNLVG---HVWDLWKEGTAMEAVDKSLGESCCAPEI 669
GVLL EI F L G+ + V KEGT M A D + PE+
Sbjct: 237 GVLLWEI--------FSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYT------TPEM 280
Query: 670 LRCIHLGLLCVQEQATDRPNMSAVVSMLGS 699
+ + L C + + RP S +V LG+
Sbjct: 281 YQTM---LDCWHGEPSQRPTFSELVEHLGN 307
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDY 172
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLDY 172
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 31/287 (10%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKE-----IAVKRL-SRSSGQGIEEFKTEIALIAQ 474
N+ LG G FG V + GKE +AVK L S + E +E+ +++
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 475 L-QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSL-------LDWSKRFEI 526
L QH N+V++LG C ++I EY L ++ +A+ L L+
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRV 586
+A+G+ +L + IHRD+ A NVLL KI DFG+AR I ++N +
Sbjct: 158 SSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIMNDSNYI 209
Query: 587 VG-----TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVG 641
V +MAPE + +++ +SDV+S+G+LL EI N + S + LV
Sbjct: 210 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 269
Query: 642 HVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLC--VQEQATD 686
+ + + A + + S+ ++C A E +C +QEQA +
Sbjct: 270 DGYQMAQPAFAPKNI-YSIMQACWALEPTHRPTFQQICSFLQEQAQE 315
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 17/211 (8%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARG 533
H N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 120
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYM 593
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y
Sbjct: 121 --FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYR 173
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
APE + +ST D++S G + E++ R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 175
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 17/211 (8%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARG 533
H N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 119
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYM 593
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y
Sbjct: 120 --FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYR 172
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
APE + +ST D++S G + E++ R
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 17/211 (8%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARG 533
H N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 117
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYM 593
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y
Sbjct: 118 --FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYR 170
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
APE + +ST D++S G + E++ R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 17/211 (8%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARG 533
H N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 121
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYM 593
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y
Sbjct: 122 --FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYR 174
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
APE + +ST D++S G + E++ R
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 17/211 (8%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARG 533
H N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 120
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYM 593
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y
Sbjct: 121 --FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYR 173
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
APE + +ST D++S G + E++ R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 17/211 (8%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARG 533
H N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 119
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYM 593
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y
Sbjct: 120 --FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYR 172
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
APE + +ST D++S G + E++ R
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 17/211 (8%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARG 533
H N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 117
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYM 593
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y
Sbjct: 118 --FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYR 170
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
APE + +ST D++S G + E++ R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 17/211 (8%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARG 533
H N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 118
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYM 593
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y
Sbjct: 119 --FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYR 171
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
APE + +ST D++S G + E++ R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 138/295 (46%), Gaps = 54/295 (18%)
Query: 430 LGEGGFGSVYKGVLQNGK------EIAVKRLSR-SSGQGIEEFKTEIALIAQLQHRNLVS 482
LGEG FG V K + K +AVK L +S + + +E ++ Q+ H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAK-------------RSLLDWSKRFEIICG 529
+ G C ++ +LI EY SL ++ + K S LD + G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 530 --------IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQ-I 579
I++G+ YL + + ++HRDL A N+L+ KISDFG++R ++ D +
Sbjct: 151 DLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 580 EENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLEQGSGSWN 638
+ + R+ +MA E + +++T+SDV+SFGVLL EI+ LG N + +N
Sbjct: 208 KRSQGRI--PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG--GNPYPGIPPERLFN 263
Query: 639 LVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAV 693
L+ K G ME D C+ E+ R L L C +++ RP + +
Sbjct: 264 LL-------KTGHRMERPDN------CSEEMYR---LMLQCWKQEPDKRPVFADI 302
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 17/211 (8%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARG 533
H N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 117
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYM 593
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y
Sbjct: 118 --FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYR 170
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
APE + +ST D++S G + E++ R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNG---KEIAVKRLSR-SSGQGIEEFKTEIALIAQL-Q 476
ND + +GEG FG V K ++ + A+KR+ +S +F E+ ++ +L
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSL-------------DVYIFDEAKRSLLDWSKR 523
H N++++LG C L EY P+ +L + + S L +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 524 FEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENT 583
+ARG+ YL Q + IHR+L A N+L+ KI+DFG++R G ++
Sbjct: 142 LHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKK 195
Query: 584 NRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+MA E +++T SDV+S+GVLL EI+
Sbjct: 196 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 232
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 113/248 (45%), Gaps = 34/248 (13%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRLSR-SSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K + +AVK L ++ + + + +E+ ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-------------FDEAKRSLLDWSKRFEI 526
++++LG C ++ +I EY +L Y+ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRV 586
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR +NT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 587 VGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDL 646
+MAPE + +++ +SDV+SFGVL+ EI F L V ++ L
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPYPGIPVEELFKL 271
Query: 647 WKEGTAME 654
KEG M+
Sbjct: 272 LKEGHRMD 279
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 17/211 (8%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARG 533
H N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 118
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYM 593
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y
Sbjct: 119 --FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYR 171
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
APE + +ST D++S G + E++ R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 139/284 (48%), Gaps = 46/284 (16%)
Query: 430 LGEGGFGSVYKGVLQN-GKE---IAVKRLSRS-SGQGIEEFKTEIALIAQLQHRNLVSIL 484
+G G FG V +G L+ GK+ +A+K L + + EF +E +++ Q +H N++ +
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYI-FDEAKRSLLDWSKRFEIICGIARGILYLHQDSRL 543
G M++ E++ N +LD ++ ++ + +++ + ++ GIA G+ YL + +
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYLAE---M 137
Query: 544 RIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG--------YMAP 595
+HRDL A N+L+++ + K+SDFG++R +EEN++ T + AP
Sbjct: 138 SYVHRDLAARNILVNSNLVCKVSDFGLSRF-----LEENSSDPTETSSLGGKIPIRWTAP 192
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAME 654
E F++ SD +S+G+++ E++ G R WD+ + +
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMSFGER-----------------PYWDMSNQDV-IN 234
Query: 655 AVDKSLGESCCAPEILRCIH-LGLLCVQEQATDRPNMSAVVSML 697
A+++ P+ +H L L C Q+ RP VVS L
Sbjct: 235 AIEQDY-RLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 277
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 17/211 (8%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARG 533
H N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 117
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYM 593
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y
Sbjct: 118 --FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYR 170
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
APE + +ST D++S G + E++ R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 141/320 (44%), Gaps = 48/320 (15%)
Query: 405 NSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYK----GVLQNG--KEIAVKRLSRSS 458
++E LP +D S + LG G FG V + G+ + + +AVK L +
Sbjct: 2 HAERLP-YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 60
Query: 459 GQGIEE-FKTEIALIAQL-QHRNLVSILGCCIEEQ-EKMLIYEYLPNKSLDVYI------ 509
+E+ ++ + H N+V++LG C + M+I E+ +L Y+
Sbjct: 61 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNE 120
Query: 510 FDEAKRSLLDWSKRF----EIIC---GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMN 562
F K + D K F +IC +A+G+ +L + + IHRDL A N+LL
Sbjct: 121 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV 177
Query: 563 PKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
KI DFG+AR D +MAPE + +++ +SDV+SFGVLL EI
Sbjct: 178 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI--- 234
Query: 623 RRNNTFHLEQGSGSWNLVG---HVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLC 679
F L G+ + V KEGT M A D + PE+ + + L C
Sbjct: 235 -----FSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYT------TPEMYQTM---LDC 278
Query: 680 VQEQATDRPNMSAVVSMLGS 699
+ + RP S +V LG+
Sbjct: 279 WHGEPSQRPTFSELVEHLGN 298
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 17/209 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQHR 478
+F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 479 NLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA---- 118
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y AP
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 173
Query: 596 EYAME-GLFSTKSDVYSFGVLLLEIILGR 623
E + +ST D++S G + E++ R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 31/287 (10%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKE-----IAVKRL-SRSSGQGIEEFKTEIALIAQ 474
N+ LG G FG V + GKE +AVK L S + E +E+ +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 475 L-QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSL-------LDWSKRFEI 526
L QH N+V++LG C ++I EY L ++ +A+ L L+
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRV 586
+A+G+ +L + IHRD+ A NVLL KI DFG+AR I ++N +
Sbjct: 166 SSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIMNDSNYI 217
Query: 587 VG-----TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVG 641
V +MAPE + +++ +SDV+S+G+LL EI N + S + LV
Sbjct: 218 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 277
Query: 642 HVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLC--VQEQATD 686
+ + + A + + S+ ++C A E +C +QEQA +
Sbjct: 278 DGYQMAQPAFAPKNI-YSIMQACWALEPTHRPTFQQICSFLQEQAQE 323
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 145/301 (48%), Gaps = 48/301 (15%)
Query: 430 LGEGGFGSVYKGVLQN-GKE---IAVKRLSRS-SGQGIEEFKTEIALIAQLQHRNLVSIL 484
+G G FG V +G L+ GK+ +A+K L + + EF +E +++ Q +H N++ +
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYI-FDEAKRSLLDWSKRFEIICGIARGILYLHQDSRL 543
G M++ E++ N +LD ++ ++ + +++ + ++ GIA G+ YL + +
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYLAE---M 135
Query: 544 RIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG--------YMAP 595
+HRDL A N+L+++ + K+SDFG++R +EEN++ T + AP
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRF-----LEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEII-LGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAME 654
E F++ SD +S+G+++ E++ G R WD+ + +
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMSFGER-----------------PYWDMSNQDV-IN 232
Query: 655 AVDKSLGESCCAPEILRCIH-LGLLCVQEQATDRPNMSAVVSMLGSDNAPSSPKHPAFIA 713
A+++ P+ +H L L C Q+ RP VVS L D +P +A
Sbjct: 233 AIEQDY-RLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL--DKMIRNPASLKIVA 289
Query: 714 K 714
+
Sbjct: 290 R 290
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 17/209 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQHR 478
+F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 479 NLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA---- 116
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y AP
Sbjct: 117 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 171
Query: 596 EYAME-GLFSTKSDVYSFGVLLLEIILGR 623
E + +ST D++S G + E++ R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDY 175
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 130/290 (44%), Gaps = 33/290 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKE-----IAVKRL-SRSSGQGIEEFKTEIALIAQ 474
N+ LG G FG V + GKE +AVK L S + E +E+ +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 475 L-QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARG 533
L QH N+V++LG C ++I EY D+ F K +L+ F I A
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYG--DLLNFLRRKSRVLETDPAFAIANSTAST 163
Query: 534 ILYLHQDSRL----------RIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENT 583
LH S++ IHRD+ A NVLL KI DFG+AR I ++
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIMNDS 218
Query: 584 NRVVG-----TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWN 638
N +V +MAPE + +++ +SDV+S+G+LL EI N + S +
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 278
Query: 639 LVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLC--VQEQATD 686
LV + + + A + + S+ ++C A E +C +QEQA +
Sbjct: 279 LVKDGYQMAQPAFAPKNI-YSIMQACWALEPTHRPTFQQICSFLQEQAQE 327
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 146/331 (44%), Gaps = 54/331 (16%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYK----GVLQNG--KE 448
D LD+ + E LP +D S + + LG G FG V + G+ + +
Sbjct: 5 DELPLDE---HCERLP-YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRT 60
Query: 449 IAVKRLSRSSGQGIEE-FKTEIALIAQL-QHRNLVSILGCCIEEQ-EKMLIYEYLPNKSL 505
+AVK L + +E+ ++ + H N+V++LG C + M+I E+ +L
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 506 DVYIFDEAKRSLL-------DWSKRF----EIIC---GIARGILYLHQDSRLRIIHRDLK 551
Y+ +KR+ D K F +IC +A+G+ +L + + IHRDL
Sbjct: 121 STYL--RSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 175
Query: 552 ASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYS 611
A N+LL KI DFG+AR D +MAPE + +++ +SDV+S
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 612 FGVLLLEIILGRRNNTFHLEQGSGSWNLVG---HVWDLWKEGTAMEAVDKSLGESCCAPE 668
FGVLL EI F L G+ + V KEGT M A D + PE
Sbjct: 236 FGVLLWEI--------FSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYT------TPE 279
Query: 669 ILRCIHLGLLCVQEQATDRPNMSAVVSMLGS 699
+ + + L C + + RP S +V LG+
Sbjct: 280 MYQTM---LDCWHGEPSQRPTFSELVEHLGN 307
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 144/330 (43%), Gaps = 51/330 (15%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYK----GVLQNG--KE 448
D LD+ + E LP +D S + LG G FG V + G+ + +
Sbjct: 4 DELPLDE---HCERLP-YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRT 59
Query: 449 IAVKRLSRSSGQGIEE-FKTEIALIAQL-QHRNLVSILGCCIEEQ-EKMLIYEYLPNKSL 505
+AVK L + +E+ ++ + H N+V++LG C + M+I E+ +L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 506 DVYI------FDEAKRSLLDWSKRF----EIIC---GIARGILYLHQDSRLRIIHRDLKA 552
Y+ F K + D K F +IC +A+G+ +L + + IHRDL A
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 553 SNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSF 612
N+LL KI DFG+AR D +MAPE + +++ +SDV+SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 613 GVLLLEIILGRRNNTFHLEQGSGSWNLVG---HVWDLWKEGTAMEAVDKSLGESCCAPEI 669
GVLL EI F L G+ + V KEGT M A D + PE+
Sbjct: 237 GVLLWEI--------FSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYT------TPEM 280
Query: 670 LRCIHLGLLCVQEQATDRPNMSAVVSMLGS 699
+ + L C + + RP S +V LG+
Sbjct: 281 YQTM---LDCWHGEPSQRPTFSELVEHLGN 307
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 141/326 (43%), Gaps = 47/326 (14%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYK----GVLQNG--KE 448
D LD+ + E LP +D S + + LG G FG V + G+ + +
Sbjct: 4 DELPLDE---HCERLP-YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRT 59
Query: 449 IAVKRLSRSSGQGIEE-FKTEIALIAQL-QHRNLVSILGCCIEEQ-EKMLIYEYLPNKSL 505
+AVK L + +E+ ++ + H N+V++LG C + M+I E+ +L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 506 DVYI------FDEAKRSLLDWSKRFEIIC---GIARGILYLHQDSRLRIIHRDLKASNVL 556
Y+ F K D+ +IC +A+G+ +L + + IHRDL A N+L
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 557 LDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLL 616
L KI DFG+AR D +MAPE + +++ +SDV+SFGVLL
Sbjct: 177 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 617 LEIILGRRNNTFHLEQGSGSWNLVG---HVWDLWKEGTAMEAVDKSLGESCCAPEILRCI 673
EI G+ + V KEGT M A D + PE+ + +
Sbjct: 237 WEI----------FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT------TPEMYQTM 280
Query: 674 HLGLLCVQEQATDRPNMSAVVSMLGS 699
L C + + RP S +V LG+
Sbjct: 281 ---LDCWHGEPSQRPTFSELVEHLGN 303
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 17/209 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQHR 478
+F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 479 NLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA---- 116
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y AP
Sbjct: 117 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 171
Query: 596 EYAME-GLFSTKSDVYSFGVLLLEIILGR 623
E + +ST D++S G + E++ R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 17/209 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQHR 478
+F K+GEG +G VYK + G+ +A+ ++ + +G+ EI+L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 479 NLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA---- 117
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
+ H R++HRDLK N+L++ K++DFG+AR FG + T+ VV T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 172
Query: 596 EYAME-GLFSTKSDVYSFGVLLLEIILGR 623
E + +ST D++S G + E++ R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 17/209 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQHR 478
+F K+GEG +G VYK + G+ +A+ ++ + +G+ EI+L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 479 NLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
N+V +L E + L++E+L K +D L+ S F+++ G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA---- 116
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
+ H R++HRDLK N+L++ K++DFG+AR FG + T+ VV T Y AP
Sbjct: 117 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 171
Query: 596 EYAME-GLFSTKSDVYSFGVLLLEIILGR 623
E + +ST D++S G + E++ R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 119
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 169
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 130/291 (44%), Gaps = 43/291 (14%)
Query: 430 LGEGGFGSVYKGVLQ-----NGKEIAVKRLSRSSG-QGIEEFKTEIALIAQLQHRNLVSI 483
LGEG FG V G+ +AVK L +G Q +K EI ++ L H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 484 LGCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
GCC + L+ EY+P SL Y+ R + ++ I G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHAQ- 153
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGD--QIEENTNRVVGTYGYMAPEY 597
IHRDL A NVLLD KI DFG+A+ G + ++ E+ + V Y APE
Sbjct: 154 --HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY---APEC 208
Query: 598 AMEGLFSTKSDVYSFGVLLLEIIL----GRRNNTFHLE-----QGSGSWNLVGHVWDLWK 648
E F SDV+SFGV L E++ + T LE QG + V + +L +
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMT---VLRLTELLE 265
Query: 649 EGTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLGS 699
G + DK C E+ HL C + +A+ RP ++ +L +
Sbjct: 266 RGERLPRPDK------CPAEV---YHLMKNCWETEASFRPTFENLIPILKT 307
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI+DFG + + ++R + GT Y
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 177
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE K D++S GVL E ++G+
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 112/211 (53%), Gaps = 17/211 (8%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSL---LDWSKRFEIICGIARG 533
H N+V +L E + L++E+L ++ L ++ A + L S F+++ G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLA-- 117
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYM 593
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y
Sbjct: 118 --FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYR 170
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
APE + +ST D++S G + E++ R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 140/320 (43%), Gaps = 48/320 (15%)
Query: 405 NSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYK----GVLQNG--KEIAVKRLSRSS 458
+ E LP +D S + LG G FG V + G+ + + +AVK L +
Sbjct: 2 HCERLP-YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 60
Query: 459 GQGIEE-FKTEIALIAQL-QHRNLVSILGCCIEEQ-EKMLIYEYLPNKSLDVYI------ 509
+E+ ++ + H N+V++LG C + M+I E+ +L Y+
Sbjct: 61 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNE 120
Query: 510 FDEAKRSLLDWSKRF----EIIC---GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMN 562
F K + D K F +IC +A+G+ +L + + IHRDL A N+LL
Sbjct: 121 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV 177
Query: 563 PKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
KI DFG+AR D +MAPE + +++ +SDV+SFGVLL EI
Sbjct: 178 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI--- 234
Query: 623 RRNNTFHLEQGSGSWNLVG---HVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLC 679
F L G+ + V KEGT M A D + PE+ + + L C
Sbjct: 235 -----FSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYT------TPEMYQTM---LDC 278
Query: 680 VQEQATDRPNMSAVVSMLGS 699
+ + RP S +V LG+
Sbjct: 279 WHGEPSQRPTFSELVEHLGN 298
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 19/200 (9%)
Query: 430 LGE-GGFGSVYKGVLQNGKE---IAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILG 485
+GE G FG VYK QN + A K + S + +E++ EI ++A H N+V +L
Sbjct: 17 IGELGDFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL-YLHQDSRLR 544
E ++ E+ ++D + E +R L + + +++C L YLH + +
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVML-ELERPLTE--SQIQVVCKQTLDALNYLHDN---K 128
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM----- 599
IIHRDLKA N+L + K++DFG++ I+ + +GT +MAPE M
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRR-DSFIGTPYWMAPEVVMCETSK 187
Query: 600 EGLFSTKSDVYSFGVLLLEI 619
+ + K+DV+S G+ L+E+
Sbjct: 188 DRPYDYKADVWSLGITLIEM 207
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 144/330 (43%), Gaps = 51/330 (15%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYK----GVLQNG--KE 448
D LD+ + E LP +D S + LG G FG V + G+ + +
Sbjct: 41 DELPLDE---HCERLP-YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRT 96
Query: 449 IAVKRLSRSSGQGIEE-FKTEIALIAQL-QHRNLVSILGCCIEEQ-EKMLIYEYLPNKSL 505
+AVK L + +E+ ++ + H N+V++LG C + M+I E+ +L
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 506 DVYI------FDEAKRSLLDWSKRF----EIIC---GIARGILYLHQDSRLRIIHRDLKA 552
Y+ F K + D K F +IC +A+G+ +L + + IHRDL A
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 213
Query: 553 SNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSF 612
N+LL KI DFG+AR D +MAPE + +++ +SDV+SF
Sbjct: 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 273
Query: 613 GVLLLEIILGRRNNTFHLEQGSGSWNLVG---HVWDLWKEGTAMEAVDKSLGESCCAPEI 669
GVLL EI F L G+ + V KEGT M A D + PE+
Sbjct: 274 GVLLWEI--------FSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYT------TPEM 317
Query: 670 LRCIHLGLLCVQEQATDRPNMSAVVSMLGS 699
+ + L C + + RP S +V LG+
Sbjct: 318 YQTM---LDCWHGEPSQRPTFSELVEHLGN 344
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 96/205 (46%), Gaps = 9/205 (4%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLS-RSSGQGIEEFKTEIALIAQLQHR 478
D+ LGEG G V V + +E +AVK + + + E K EI + L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N+V G E + L EY L I + D + F + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD+K N+LLD N KISDFG+A +F + E N++ GT Y+APE
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILG 622
F + DV+S G++L ++ G
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 122/241 (50%), Gaps = 27/241 (11%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIA 473
AT+ + ++G G +G+VYK +G +A+K + +G G E+AL+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 474 QLQ---HRNLVSILGCCI-----EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFE 525
+L+ H N+V ++ C E + L++E++ ++ L Y+ D+A L +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKD 124
Query: 526 IICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR 585
++ RG+ +LH + I+HRDLK N+L+ + K++DFG+ARI+ +
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALTP 178
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWD 645
VV T Y APE ++ ++T D++S G + E+ RR F G+ + +G ++D
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLF---CGNSEADQLGKIFD 233
Query: 646 L 646
L
Sbjct: 234 L 234
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 430 LGEGGFGSVYKGVLQ--NGKEIAVKRLSRSSG---QGIEEFKTEIALIAQLQHRNLVSIL 484
+G G FG V G L+ +EI V + SG + +F +E +++ Q H N++ +
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIF-DEAKRSLLDWSKRFEIICGIARGILYLHQDSRL 543
G + M+I E++ N SLD ++ ++ + +++ + ++ GIA G+ YL + +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL---ADM 128
Query: 544 RIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG---TYGYMAPEYAME 600
+HR L A N+L+++ + K+SDFG++R D + +G + APE
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 601 GLFSTKSDVYSFGVLLLEII 620
F++ SDV+S+G+++ E++
Sbjct: 189 RKFTSASDVWSYGIVMWEVM 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
Y H R+IHRD+K N+LL +A KI++FG + + GT Y+ P
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPP 177
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGR 623
E + K D++S GVL E ++G+
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 41/224 (18%)
Query: 430 LGEGGFGSVYK----GVLQNGK--EIAVKRLS-RSSGQGIEEFKTEIALIAQL-QHRNLV 481
LG G FG V G+ + G ++AVK L ++ E +E+ ++ QL H N+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDW-----SKRFE----------- 525
++LG C LI+EY L Y+ + ++ D KR E
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 526 -IIC---GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEE 581
++C +A+G+ +L S +HRDL A NVL+ KI DFG+AR I
Sbjct: 173 DLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLAR-----DIMS 224
Query: 582 NTNRVVG-----TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
++N VV +MAPE EG+++ KSDV+S+G+LL EI
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQL 475
A DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+H N++ + G + LI EY P L + K S D + I +A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGY 592
Y H R+IHRD+K N+LL +A KI++FG + + ++R + GT Y
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS-------VHAPSSRRTTLCGTLDY 175
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ PE + K D++S GVL E ++G+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 18/214 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLSRSSGQ-GIEEFKTEIALIAQLQHRN 479
+D+ +G G V KE +A+KR++ Q ++E EI ++Q H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSL-----DVYIFDEAKRSLLDWSKRFEIICGIARGI 534
+VS + + E L+ + L S+ + E K +LD S I+ + G+
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGDQIEENTNR--VVGTY 590
YLH++ + IHRD+KA N+LL + +I+DFG++ GGD I N R VGT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD-ITRNKVRKTFVGTP 185
Query: 591 GYMAPEYAMEGL--FSTKSDVYSFGVLLLEIILG 622
+MAPE ME + + K+D++SFG+ +E+ G
Sbjct: 186 CWMAPE-VMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 125/285 (43%), Gaps = 31/285 (10%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGK----EIAVKRLSRS-SGQGIEEFKTEIALIAQ 474
A D + LGEG FG VY+GV N K +AVK + + E+F +E ++
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
L H ++V ++G IEE+ +I E P L Y+ E ++ L I + +
Sbjct: 66 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAM 122
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNRVVGTYGYM 593
YL + +HRD+ N+L+ + K+ DFG++R I D + + R+ +M
Sbjct: 123 AYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWM 177
Query: 594 APEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAM 653
+PE F+T SDV+ F V + EI+ + F LE +++G +
Sbjct: 178 SPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK----DVIG----------VL 223
Query: 654 EAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLG 698
E D+ C P + L C +DRP + +V L
Sbjct: 224 EKGDRLPKPDLCPPVLYT---LMTRCWDYDPSDRPRFTELVCSLS 265
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 125/284 (44%), Gaps = 31/284 (10%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGK----EIAVKRLSRS-SGQGIEEFKTEIALIAQ 474
A D + LGEG FG VY+GV N K +AVK + + E+F +E ++
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
L H ++V ++G IEE+ +I E P L Y+ E ++ L I + +
Sbjct: 70 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAM 126
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNRVVGTYGYM 593
YL + +HRD+ N+L+ + K+ DFG++R I D + + R+ +M
Sbjct: 127 AYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWM 181
Query: 594 APEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAM 653
+PE F+T SDV+ F V + EI+ + F LE +++G +
Sbjct: 182 SPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK----DVIG----------VL 227
Query: 654 EAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
E D+ C P + L C +DRP + +V L
Sbjct: 228 EKGDRLPKPDLCPPVLYT---LMTRCWDYDPSDRPRFTELVCSL 268
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 109/211 (51%), Gaps = 17/211 (8%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSR-SSGQGIEEFKT-EIALIAQLQ 476
+ +F K+GEG +G VYK + G+ +A+K++ + +G+ EI+L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPN---KSLDVYIFDEAKRSLLDWSKRFEIICGIARG 533
H N+V +L E + L++E++ K +D L+ S F+++ G+A
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIK-SYLFQLLQGLA-- 120
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYM 593
+ H R++HRDLK N+L++ K++DFG+AR FG + + VV T Y
Sbjct: 121 --FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYR 173
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGR 623
APE + +ST D++S G + E++ R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 125/285 (43%), Gaps = 31/285 (10%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQNGK----EIAVKRLSRS-SGQGIEEFKTEIALIAQ 474
A D + LGEG FG VY+GV N K +AVK + + E+F +E ++
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
L H ++V ++G IEE+ +I E P L Y+ E ++ L I + +
Sbjct: 82 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAM 138
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNRVVGTYGYM 593
YL + +HRD+ N+L+ + K+ DFG++R I D + + R+ +M
Sbjct: 139 AYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWM 193
Query: 594 APEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAM 653
+PE F+T SDV+ F V + EI+ + F LE +++G +
Sbjct: 194 SPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK----DVIG----------VL 239
Query: 654 EAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLG 698
E D+ C P + L C +DRP + +V L
Sbjct: 240 EKGDRLPKPDLCPPVLYT---LMTRCWDYDPSDRPRFTELVCSLS 281
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 18/214 (8%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLSRSSGQ-GIEEFKTEIALIAQLQHRN 479
+D+ +G G V KE +A+KR++ Q ++E EI ++Q H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSL-----DVYIFDEAKRSLLDWSKRFEIICGIARGI 534
+VS + + E L+ + L S+ + E K +LD S I+ + G+
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGDQIEENTNR--VVGTY 590
YLH++ + IHRD+KA N+LL + +I+DFG++ GGD I N R VGT
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD-ITRNKVRKTFVGTP 190
Query: 591 GYMAPEYAMEGL--FSTKSDVYSFGVLLLEIILG 622
+MAPE ME + + K+D++SFG+ +E+ G
Sbjct: 191 CWMAPE-VMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 112/248 (45%), Gaps = 34/248 (13%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRLSR-SSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K + +AVK L ++ + + + +E+ ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-------------FDEAKRSLLDWSKRFEI 526
++++LG C ++ +I EY +L Y+ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRV 586
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 587 VGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDL 646
+MAPE + +++ +SDV+SFGVL+ EI F L V ++ L
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPYPGIPVEELFKL 271
Query: 647 WKEGTAME 654
KEG M+
Sbjct: 272 LKEGHRMD 279
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 112/248 (45%), Gaps = 34/248 (13%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRLSR-SSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K + +AVK L ++ + + + +E+ ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-------------FDEAKRSLLDWSKRFEI 526
++++LG C ++ +I EY +L Y+ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRV 586
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 587 VGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDL 646
+MAPE + +++ +SDV+SFGVL+ EI F L V ++ L
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPYPGIPVEELFKL 271
Query: 647 WKEGTAME 654
KEG M+
Sbjct: 272 LKEGHRMD 279
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 105/200 (52%), Gaps = 10/200 (5%)
Query: 424 FSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
++ K+G+G G+VY + + G+E+A+++++ E EI ++ + ++ N+V+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSR 542
L + E ++ EYL SL D + +D + + + + +LH +
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN-- 135
Query: 543 LRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGL 602
++IHRD+K+ N+LL + K++DFG +Q + +T +VGT +MAPE
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKA 192
Query: 603 FSTKSDVYSFGVLLLEIILG 622
+ K D++S G++ +E+I G
Sbjct: 193 YGPKVDIWSLGIMAIEMIEG 212
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 36/249 (14%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRLSR-SSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K + +AVK L ++ + + + +E+ ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-------------FDEAKRSLLDWSKRFEI 526
++++LG C ++ +I EY +L Y+ + + +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWD 645
+ +MAPE + +++ +SDV+SFGVL+ EI F L V ++
Sbjct: 220 RLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPYPGIPVEELFK 270
Query: 646 LWKEGTAME 654
L KEG M+
Sbjct: 271 LLKEGHRMD 279
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 11/204 (5%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
+ + +G G FG V K + K++A+K++ S + + F E+ ++++ H N+V
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIV 65
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+ G C+ L+ EY SL + + ++G+ YLH
Sbjct: 66 KLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 123
Query: 542 RLRIIHRDLKASNVLLDAAMNP-KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+IHRDLK N+LL A KI DFG A I+ + G+ +MAPE
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEG 178
Query: 601 GLFSTKSDVYSFGVLLLEIILGRR 624
+S K DV+S+G++L E+I R+
Sbjct: 179 SNYSEKCDVFSWGIILWEVITRRK 202
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 11/204 (5%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
+ + +G G FG V K + K++A+K++ S + + F E+ ++++ H N+V
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIV 64
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+ G C+ L+ EY SL + + ++G+ YLH
Sbjct: 65 KLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 542 RLRIIHRDLKASNVLLDAAMNP-KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+IHRDLK N+LL A KI DFG A I+ + G+ +MAPE
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEG 177
Query: 601 GLFSTKSDVYSFGVLLLEIILGRR 624
+S K DV+S+G++L E+I R+
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRK 201
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 19/201 (9%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIE---EFKTEIALIAQLQHRNLVSILG 485
LGEG FG V + +++A+K +SR + + + EI+ + L+H +++ +
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF--EIICGIARGILYLHQDSRL 543
+ +++ EY + D + E KR D +RF +IIC I Y H R
Sbjct: 77 VITTPTDIVMVIEYAGGELFDYIV--EKKRMTEDEGRRFFQQIICAIE----YCH---RH 127
Query: 544 RIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLF 603
+I+HRDLK N+LLD +N KI+DFG++ I + + G+ Y APE L+
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEVINGKLY 184
Query: 604 S-TKSDVYSFGVLLLEIILGR 623
+ + DV+S G++L +++GR
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGR 205
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 132/293 (45%), Gaps = 39/293 (13%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKE-----IAVKRL-SRSSGQGIEEFKTEIALIAQ 474
N+ LG G FG V + GKE +AVK L S + E +E+ +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 475 L-QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEII------ 527
L QH N+V++LG C ++I EY D+ F K +L+ F I
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYG--DLLNFLRRKSRVLETDPAFAIANSTLST 163
Query: 528 -------CGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIE 580
+A+G+ +L + IHRD+ A NVLL KI DFG+AR I
Sbjct: 164 RDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIM 215
Query: 581 ENTNRVVG-----TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSG 635
++N +V +MAPE + +++ +SDV+S+G+LL EI N + S
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK 275
Query: 636 SWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLC--VQEQATD 686
+ LV + + + A + + S+ ++C A E +C +QEQA +
Sbjct: 276 FYKLVKDGYQMAQPAFAPKNI-YSIMQACWALEPTHRPTFQQICSFLQEQAQE 327
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 28/215 (13%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRLSR-SSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K + +AVK L ++ + + + +E+ ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-------------FDEAKRSLLDWSKRFEI 526
++++LG C ++ +I EY +L Y+ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+ +MAPE + +++ +SDV+SFGVL+ EI
Sbjct: 220 RLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 139/334 (41%), Gaps = 61/334 (18%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYK----GVLQNG--KE 448
D LD+ + E LP +D S + LG G FG V + G+ + +
Sbjct: 6 DELPLDE---HCERLP-YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRT 61
Query: 449 IAVKRLSRSSGQGIEE-FKTEIALIAQL-QHRNLVSILGCCIEEQEKMLIY--------- 497
+AVK L + +E+ ++ + H N+V++LG C + +++
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 498 ---------EYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHR 548
E++P K D+Y + L +A+G+ +L + + IHR
Sbjct: 122 STYLRSKRNEFVPYKPEDLY------KDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHR 172
Query: 549 DLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSD 608
DL A N+LL KI DFG+AR D +MAPE + +++ +SD
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSD 232
Query: 609 VYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVG---HVWDLWKEGTAMEAVDKSLGESCC 665
V+SFGVLL EI F L G+ + V KEGT M A D +
Sbjct: 233 VWSFGVLLWEI--------FSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYT------ 276
Query: 666 APEILRCIHLGLLCVQEQATDRPNMSAVVSMLGS 699
PE+ + + L C + + RP S +V LG+
Sbjct: 277 TPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 307
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 36/249 (14%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRLSR-SSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K + +AVK L ++ + + + +E+ ++ + +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-------------FDEAKRSLLDWSKRFEI 526
++++LG C ++ +I EY +L Y+ + + +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWD 645
+ +MAPE + +++ +SDV+SFGVL+ EI F L V ++
Sbjct: 266 RLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPYPGIPVEELFK 316
Query: 646 LWKEGTAME 654
L KEG M+
Sbjct: 317 LLKEGHRMD 325
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRN 479
D ++G G FG V+ G L+ + +AVK + ++ +F E ++ Q H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQ 539
+V ++G C ++Q ++ E + ++ E R L +++ A G+ YL
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR--LRVKTLLQMVGDAAAGMEYLES 231
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG-------- 591
IHRDL A N L+ KISDFGM+R E + V G
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR--------EEADGVXAASGGLRQVPVK 280
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLE 618
+ APE G +S++SDV+SFG+LL E
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 14/200 (7%)
Query: 428 NKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIE---EFKTEIALIAQLQHRNLVSI 483
+ LG G FG V G + G ++AVK L+R + ++ + + EI + +H +++ +
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 484 LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRL 543
+ ++ EY+ L YI K LD + + I G+ Y H R
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI---CKNGRLDEKESRRLFQQILSGVDYCH---RH 135
Query: 544 RIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLF 603
++HRDLK NVLLDA MN KI+DFG++ + + + G+ Y APE L+
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS---CGSPNYAAPEVISGRLY 192
Query: 604 S-TKSDVYSFGVLLLEIILG 622
+ + D++S GV+L ++ G
Sbjct: 193 AGPEVDIWSSGVILYALLCG 212
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRN 479
D ++G G FG V+ G L+ + +AVK + ++ +F E ++ Q H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQ 539
+V ++G C ++Q ++ E + ++ E R L +++ A G+ YL
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR--LRVKTLLQMVGDAAAGMEYLES 231
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG-------- 591
IHRDL A N L+ KISDFGM+R E + V G
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR--------EEADGVYAASGGLRQVPVK 280
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLE 618
+ APE G +S++SDV+SFG+LL E
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 28/215 (13%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRLSR-SSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K + +AVK L ++ + + + +E+ ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-------------FDEAKRSLLDWSKRFEI 526
++ +LG C ++ +I EY +L Y+ + + +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
+ +MAPE + +++ +SDV+SFGVL+ EI
Sbjct: 220 RLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 138/326 (42%), Gaps = 47/326 (14%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYK----GVLQNG--KE 448
D LD+ + E LP +D S + + LG G FG V + G+ + +
Sbjct: 4 DELPLDE---HCERLP-YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRT 59
Query: 449 IAVKRLSRSSGQGIEE-FKTEIALIAQL-QHRNLVSILGCCIEEQ-EKMLIYEYLPNKSL 505
+AVK L + +E+ ++ + H N+V++LG C + M+I E+ +L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 506 DVYI---------FDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVL 556
Y+ + + + L +A+G+ +L + + IHRDL A N+L
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 557 LDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLL 616
L KI DFG+AR D +MAPE + +++ +SDV+SFGVLL
Sbjct: 177 LSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 617 LEIILGRRNNTFHLEQGSGSWNLVG---HVWDLWKEGTAMEAVDKSLGESCCAPEILRCI 673
EI G+ + V KEGT M A D + PE+ + +
Sbjct: 237 WEI----------FSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYT------TPEMYQTM 280
Query: 674 HLGLLCVQEQATDRPNMSAVVSMLGS 699
L C + + RP S +V LG+
Sbjct: 281 ---LDCWHGEPSQRPTFSELVEHLGN 303
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 109/213 (51%), Gaps = 18/213 (8%)
Query: 418 AAATNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLS-RSSGQGIEEFKT-EIALIAQ 474
A + + + KLGEG +G VYK + + +A+KR+ +G+ E++L+ +
Sbjct: 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKE 89
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
LQHRN++ + LI+EY N L Y+ D+ + K F + + G+
Sbjct: 90 LQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYM-DKNPDVSMRVIKSF--LYQLINGV 145
Query: 535 LYLHQDSRLRIIHRDLKASNVLL---DAAMNP--KISDFGMARIFGGDQIEENTNRVVGT 589
+ H SR R +HRDLK N+LL DA+ P KI DFG+AR F G I + T+ ++ T
Sbjct: 146 NFCH--SR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIPIRQFTHEII-T 200
Query: 590 YGYMAPEYAM-EGLFSTKSDVYSFGVLLLEIIL 621
Y PE + +ST D++S + E+++
Sbjct: 201 LWYRPPEILLGSRHYSTSVDIWSIACIWAEMLM 233
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 36/249 (14%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRLSR-SSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K + +AVK L ++ + + + +E+ ++ + +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-------------FDEAKRSLLDWSKRFEI 526
++++LG C ++ +I EY +L Y+ + + +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWD 645
+ +MAPE + +++ +SDV+SFGVL+ EI F L V ++
Sbjct: 207 RLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPYPGIPVEELFK 257
Query: 646 LWKEGTAME 654
L KEG M+
Sbjct: 258 LLKEGHRMD 266
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 117/249 (46%), Gaps = 36/249 (14%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRLSR-SSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K + +AVK L ++ + + + +E+ ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-------------FDEAKRSLLDWSKRFEI 526
++++LG C ++ +I EY +L Y+ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ +I+DFG+AR I D ++ TN
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWD 645
+ +MAPE + +++ +SDV+SFGVL+ EI F L V ++
Sbjct: 220 RLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPYPGIPVEELFK 270
Query: 646 LWKEGTAME 654
L KEG M+
Sbjct: 271 LLKEGHRMD 279
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 36/249 (14%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRLSR-SSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K + +AVK L ++ + + + +E+ ++ + +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-------------FDEAKRSLLDWSKRFEI 526
++++LG C ++ +I EY +L Y+ + + +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWD 645
+ +MAPE + +++ +SDV+SFGVL+ EI F L V ++
Sbjct: 212 RLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPYPGIPVEELFK 262
Query: 646 LWKEGTAME 654
L KEG M+
Sbjct: 263 LLKEGHRMD 271
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KXQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 36/249 (14%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRLSR-SSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K + +AVK L ++ + + + +E+ ++ + +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-------------FDEAKRSLLDWSKRFEI 526
++++LG C ++ +I EY +L Y+ + + +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWD 645
+ +MAPE + +++ +SDV+SFGVL+ EI F L V ++
Sbjct: 209 RLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPYPGIPVEELFK 259
Query: 646 LWKEGTAME 654
L KEG M+
Sbjct: 260 LLKEGHRMD 268
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 35/280 (12%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCIE 489
+G+G FG VY G I + + R + ++ FK E+ Q +H N+V +G C+
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 490 EQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRD 549
+I ++L + D + +LD +K +I I +G+ YLH I+H+D
Sbjct: 101 PPHLAIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKD 155
Query: 550 LKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVV---GTYGYMAPEYAME------ 600
LK+ NV D I+DFG+ I G Q +++ G ++APE +
Sbjct: 156 LKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTE 214
Query: 601 ---GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVD 657
FS SDV++ G + E L R F + +W+ GT M+
Sbjct: 215 EDKLPFSKHSDVFALGTIWYE--LHAREWPFKTQPAEAI---------IWQMGTGMKPNL 263
Query: 658 KSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSML 697
+G +IL L C + +RP + ++ ML
Sbjct: 264 SQIGMGKEISDIL------LFCWAFEQEERPTFTKLMDML 297
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 103/200 (51%), Gaps = 10/200 (5%)
Query: 424 FSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
++ K+G+G G+VY + + G+E+A+++++ E EI ++ + ++ N+V+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSR 542
L + E ++ EYL SL D + +D + + + + +LH +
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN-- 135
Query: 543 LRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGL 602
++IHRD+K+ N+LL + K++DFG +Q + +VGT +MAPE
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSEMVGTPYWMAPEVVTRKA 192
Query: 603 FSTKSDVYSFGVLLLEIILG 622
+ K D++S G++ +E+I G
Sbjct: 193 YGPKVDIWSLGIMAIEMIEG 212
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNA 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 20/213 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVK-----RLSRSSGQGIEEFKTEIALI 472
A ++ LGEG FG V G+++A+K L++S QG + EI+ +
Sbjct: 10 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 67
Query: 473 AQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIAR 532
L+H +++ + + E +++ EY N+ D YI K S + + F+ I
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQ---QIIS 123
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
+ Y H R +I+HRDLK N+LLD +N KI+DFG++ I + + G+ Y
Sbjct: 124 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNY 177
Query: 593 MAPEYAMEGLFS-TKSDVYSFGVLLLEIILGRR 624
APE L++ + DV+S GV+L ++L RR
Sbjct: 178 AAPEVISGKLYAGPEVDVWSCGVILY-VMLCRR 209
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 20/213 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVK-----RLSRSSGQGIEEFKTEIALI 472
A ++ LGEG FG V G+++A+K L++S QG + EI+ +
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 58
Query: 473 AQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIAR 532
L+H +++ + + E +++ EY N+ D YI K S + + F+ I
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQ---QIIS 114
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
+ Y H R +I+HRDLK N+LLD +N KI+DFG++ I + + G+ Y
Sbjct: 115 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNY 168
Query: 593 MAPEYAMEGLFS-TKSDVYSFGVLLLEIILGRR 624
APE L++ + DV+S GV+L ++L RR
Sbjct: 169 AAPEVISGKLYAGPEVDVWSCGVILY-VMLCRR 200
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 20/213 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVK-----RLSRSSGQGIEEFKTEIALI 472
A ++ LGEG FG V G+++A+K L++S QG + EI+ +
Sbjct: 11 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 68
Query: 473 AQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIAR 532
L+H +++ + + E +++ EY N+ D YI K S + + F+ I
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQ---QIIS 124
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
+ Y H R +I+HRDLK N+LLD +N KI+DFG++ I + + G+ Y
Sbjct: 125 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNY 178
Query: 593 MAPEYAMEGLFS-TKSDVYSFGVLLLEIILGRR 624
APE L++ + DV+S GV+L ++L RR
Sbjct: 179 AAPEVISGKLYAGPEVDVWSCGVILY-VMLCRR 210
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KXQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 20/213 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVK-----RLSRSSGQGIEEFKTEIALI 472
A ++ LGEG FG V G+++A+K L++S QG + EI+ +
Sbjct: 5 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 62
Query: 473 AQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIAR 532
L+H +++ + + E +++ EY N+ D YI K S + + F+ I
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQ---QIIS 118
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
+ Y H R +I+HRDLK N+LLD +N KI+DFG++ I + + G+ Y
Sbjct: 119 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNY 172
Query: 593 MAPEYAMEGLFS-TKSDVYSFGVLLLEIILGRR 624
APE L++ + DV+S GV+L ++L RR
Sbjct: 173 AAPEVISGKLYAGPEVDVWSCGVILY-VMLCRR 204
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 23/229 (10%)
Query: 424 FSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNL 480
+ + + +G G +GSV +++G +IAVK+LSR I +T E+ L+ ++H N+
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 112
Query: 481 VSIL-----GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+ +L +EE + + +L L+ + + L D +F +I I RG+
Sbjct: 113 IGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLK 168
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
Y+H IIHRDLK SN+ ++ KI DFG+AR ++ V T Y AP
Sbjct: 169 YIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 220
Query: 596 EYAMEGL-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
E + + ++ D++S G ++ E++ GR T H+ Q L G
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTG 269
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 103/200 (51%), Gaps = 10/200 (5%)
Query: 424 FSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
++ K+G+G G+VY + + G+E+A+++++ E EI ++ + ++ N+V+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSR 542
L + E ++ EYL SL D + +D + + + + +LH +
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN-- 135
Query: 543 LRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGL 602
++IHRD+K+ N+LL + K++DFG +Q + +VGT +MAPE
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSXMVGTPYWMAPEVVTRKA 192
Query: 603 FSTKSDVYSFGVLLLEIILG 622
+ K D++S G++ +E+I G
Sbjct: 193 YGPKVDIWSLGIMAIEMIEG 212
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 141
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 142 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 193
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYK------GVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQL 475
+DF ++LG G G V K G++ K I ++ Q I E + ++ +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQ----VLHEC 71
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+V G + E + E++ SLD + EAKR + + I + RG+
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKEAKRIPEEILGKVSI--AVLRGLA 128
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
YL + + +I+HRD+K SN+L+++ K+ DFG++ G I+ N VGT YMAP
Sbjct: 129 YLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMAP 182
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGR 623
E +S +SD++S G+ L+E+ +GR
Sbjct: 183 ERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQLQH 477
DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 478 RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYL 537
N++ + G + LI EY P L + K S D + I +A + Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEY 597
H R+IHRD+K N+LL + KI+DFG + + + GT Y+ PE
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEM 181
Query: 598 AMEGLFSTKSDVYSFGVLLLEIILG 622
+ K D++S GVL E ++G
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 103/200 (51%), Gaps = 10/200 (5%)
Query: 424 FSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
++ K+G+G G+VY + + G+E+A+++++ E EI ++ + ++ N+V+
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSR 542
L + E ++ EYL SL D + +D + + + + +LH +
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN-- 136
Query: 543 LRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGL 602
++IHRD+K+ N+LL + K++DFG +Q + +VGT +MAPE
Sbjct: 137 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSXMVGTPYWMAPEVVTRKA 193
Query: 603 FSTKSDVYSFGVLLLEIILG 622
+ K D++S G++ +E+I G
Sbjct: 194 YGPKVDIWSLGIMAIEMIEG 213
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 105/200 (52%), Gaps = 10/200 (5%)
Query: 424 FSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
++ K+G+G G+VY + + G+E+A+++++ E EI ++ + ++ N+V+
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 483 ILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSR 542
L + E ++ EYL SL D + +D + + + + +LH +
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN-- 136
Query: 543 LRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGL 602
++IHR++K+ N+LL + K++DFG +Q + +T +VGT +MAPE
Sbjct: 137 -QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKA 193
Query: 603 FSTKSDVYSFGVLLLEIILG 622
+ K D++S G++ +E+I G
Sbjct: 194 YGPKVDIWSLGIMAIEMIEG 213
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 101/219 (46%), Gaps = 41/219 (18%)
Query: 429 KLGEGGFGSVYKGVLQN-GKEIAVKRLSRS-SGQGIEEFKTEIALIAQLQHRNLVSI--- 483
+LG GGFG V + + Q+ G+++A+K+ + S + E + EI ++ +L H N+VS
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 484 ---LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARG------- 533
L +L EY L Y+ +FE CG+ G
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYL------------NQFENCCGLKEGPIRTLLS 128
Query: 534 -----ILYLHQDSRLRIIHRDLKASNVLLDAA---MNPKISDFGMARIFGGDQIEENTNR 585
+ YLH++ RIIHRDLK N++L + KI D G A+ DQ E T
Sbjct: 129 DISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTE- 182
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRR 624
VGT Y+APE + ++ D +SFG L E I G R
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 150
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 151 ---IIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 202
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 101/219 (46%), Gaps = 41/219 (18%)
Query: 429 KLGEGGFGSVYKGVLQN-GKEIAVKRLSRS-SGQGIEEFKTEIALIAQLQHRNLVSI--- 483
+LG GGFG V + + Q+ G+++A+K+ + S + E + EI ++ +L H N+VS
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 484 ---LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARG------- 533
L +L EY L Y+ +FE CG+ G
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYL------------NQFENCCGLKEGPIRTLLS 129
Query: 534 -----ILYLHQDSRLRIIHRDLKASNVLLDAA---MNPKISDFGMARIFGGDQIEENTNR 585
+ YLH++ RIIHRDLK N++L + KI D G A+ DQ E T
Sbjct: 130 DISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTE- 183
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRR 624
VGT Y+APE + ++ D +SFG L E I G R
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 151
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 152 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 203
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 109/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ I AK L D +F +I I RG+ Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLN-NIVKCAK--LTDDHVQF-LIYQILRGLKYIHSAD 141
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 142 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 193
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 22/228 (9%)
Query: 409 LPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTE 468
L DLS + F +G G +G VYKG ++A ++ +G EE K E
Sbjct: 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQE 70
Query: 469 IALIAQL-QHRNLVSILGCCIE------EQEKMLIYEYLPNKSLDVYIFDEAKRSLL-DW 520
I ++ + HRN+ + G I+ + + L+ E+ S+ I + +L +W
Sbjct: 71 INMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW 130
Query: 521 SKRFEIIC-GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQI 579
IC I RG+ +LHQ ++IHRD+K NVLL K+ DFG++ D+
Sbjct: 131 ---IAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRT 182
Query: 580 EENTNRVVGTYGYMAPEYAM-----EGLFSTKSDVYSFGVLLLEIILG 622
N +GT +MAPE + + KSD++S G+ +E+ G
Sbjct: 183 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 164
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 165 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 216
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 259
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 155
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 156 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 207
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 208 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 250
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 20/201 (9%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAV----KRLSRSSG-QGIEEFKTEIALIAQLQHRNLVSI 483
LG G FG+V+KGV + G+ I + K + SG Q + + I L H ++V +
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 484 LGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIARGILYLHQ 539
LG C L+ +YLP SL ++ + LL+W + IA+G+ YL +
Sbjct: 99 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYLEE 151
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM 599
++HR+L A NVLL + +++DFG+A + D + + +MA E
Sbjct: 152 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 208
Query: 600 EGLFSTKSDVYSFGVLLLEII 620
G ++ +SDV+S+GV + E++
Sbjct: 209 FGKYTHQSDVWSYGVTVWELM 229
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 141
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 142 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLNW 193
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 94
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + C ++++ Y N L YI FDE RF I
Sbjct: 95 DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 146
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 147 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 203
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 204 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 20/208 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQ--GIE-EFKTEIALIAQLQH 477
DF LG+G FG+VY + K I A+K L ++ + G+E + + E+ + + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 478 RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYL 537
N++ + G + LI EY P L + K S D + I +A + Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGYMA 594
H R+IHRD+K N+LL + KI+DFG + + ++R + GT Y+
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRTTLCGTLDYLP 178
Query: 595 PEYAMEGLFSTKSDVYSFGVLLLEIILG 622
PE + K D++S GVL E ++G
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 165
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 166 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 217
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 260
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 20/201 (9%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAV----KRLSRSSG-QGIEEFKTEIALIAQLQHRNLVSI 483
LG G FG+V+KGV + G+ I + K + SG Q + + I L H ++V +
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 484 LGCCIEEQEKMLIYEYLPNKSLDVYIFDE----AKRSLLDWSKRFEIICGIARGILYLHQ 539
LG C L+ +YLP SL ++ + LL+W + IA+G+ YL +
Sbjct: 81 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYLEE 133
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM 599
++HR+L A NVLL + +++DFG+A + D + + +MA E
Sbjct: 134 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190
Query: 600 EGLFSTKSDVYSFGVLLLEII 620
G ++ +SDV+S+GV + E++
Sbjct: 191 FGKYTHQSDVWSYGVTVWELM 211
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGXVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 165
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 166 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGXVATRWYRAPEIMLNW 217
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 260
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 150
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 151 ---IIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 202
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIE---EFKTEIALIAQLQHRNLVSILG 485
LG GG V+ L++ +++AVK L + F+ E A L H +V++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 486 CCIEEQE----KMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
E ++ EY+ +L + E + + E+I + + + HQ+
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 136
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFG--GDQIEENTNRVVGTYGYMAPEYAM 599
IIHRD+K +N+L+ A K+ DFG+AR G+ + + T V+GT Y++PE A
Sbjct: 137 ---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ-TAAVIGTAQYLSPEQAR 192
Query: 600 EGLFSTKSDVYSFGVLLLEIILG 622
+SDVYS G +L E++ G
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 116/249 (46%), Gaps = 36/249 (14%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRLSR-SSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K + +AVK L ++ + + + +E+ ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-------------FDEAKRSLLDWSKRFEI 526
++++LG C ++ +I Y +L Y+ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWD 645
+ +MAPE + +++ +SDV+SFGVL+ EI F L V ++
Sbjct: 220 RLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPYPGIPVEELFK 270
Query: 646 LWKEGTAME 654
L KEG M+
Sbjct: 271 LLKEGHRMD 279
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 156
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 157 ---IIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 208
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 251
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 49/299 (16%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKE-----IAVKRL-SRSSGQGIEEFKTEIALIAQ 474
N+ LG G FG V + GKE +AVK L S + E +E+ +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 475 L-QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDE-------------------AK 514
L QH N+V++LG C ++I EY L ++ + +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 515 RSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF 574
R LL +S + +A+G+ +L + IHRD+ A NVLL KI DFG+AR
Sbjct: 166 RDLLHFSSQ------VAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR-- 214
Query: 575 GGDQIEENTNRVVG-----TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFH 629
I ++N +V +MAPE + +++ +SDV+S+G+LL EI N
Sbjct: 215 ---DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 271
Query: 630 LEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLC--VQEQATD 686
+ S + LV + + + A + + S+ ++C A E +C +QEQA +
Sbjct: 272 ILVNSKFYKLVKDGYQMAQPAFAPKNI-YSIMQACWALEPTHRPTFQQICSFLQEQAQE 329
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 27/204 (13%)
Query: 430 LGEGGFGSVY--KGVLQNGKEIAVKRLSRS--SGQGIEEFKTEIALIAQLQHRNLVSILG 485
+G+G F V + +L GKE+AV+ + ++ + +++ E+ ++ L H N+V +
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
E+ L+ EY + Y+ + + +F I + Y HQ I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQKF---I 134
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFG-GDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
+HRDLKA N+LLDA MN KI+DFG + F G++++E G+ Y APE LF
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDE----FCGSPPYAAPE-----LFQ 185
Query: 605 TKS------DVYSFGVLLLEIILG 622
K DV+S GV+L ++ G
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 141
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 142 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 193
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 14/200 (7%)
Query: 428 NKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIE---EFKTEIALIAQLQHRNLVSI 483
+ LG G FG V G Q G ++AVK L+R + ++ + K EI + +H +++ +
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 484 LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRL 543
+ ++ EY+ L YI + ++ + F+ I + Y H R
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ---QILSAVDYCH---RH 130
Query: 544 RIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLF 603
++HRDLK NVLLDA MN KI+DFG++ + + ++ G+ Y APE L+
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAAPEVISGRLY 187
Query: 604 S-TKSDVYSFGVLLLEIILG 622
+ + D++S GV+L ++ G
Sbjct: 188 AGPEVDIWSCGVILYALLCG 207
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 142
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 143 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 194
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 237
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 147
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 148 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 199
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 150
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 151 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 202
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 10/211 (4%)
Query: 417 IAAATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEE--FKTEIALIA 473
+ + D+ +G G +G K + +GK + K L S E+ +E+ L+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 474 QLQHRNLVSILGCCIEEQEKML--IYEYLPNKSLDVYIFDEAK-RSLLDWSKRFEIICGI 530
+L+H N+V I+ L + EY L I K R LD ++ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 531 ARGILYLHQ--DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
+ H+ D ++HRDLK +NV LD N K+ DFG+ARI D E+ VG
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--EDFAKEFVG 178
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEI 619
T YM+PE ++ KSD++S G LL E+
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 142
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 143 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 194
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 237
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 143
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 144 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 195
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 196 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 238
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 147
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 148 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 199
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 147
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 148 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 199
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 164
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 165 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 216
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 259
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 157
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 158 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 209
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 252
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 157
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 158 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 209
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 252
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 165
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 166 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 217
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 260
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 147
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 148 ---IIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 199
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV--LQNGK--EIAVKRLSR---SSGQGIEEFKTEIALIAQ 474
D KLG+G FG V +G +GK +AVK L S + +++F E+ +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
L HRNL+ + G + KM + E P SL + LL R+ + +A G+
Sbjct: 72 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 128
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGDQIEENTNRVVGTYGY 592
YL R IHRDL A N+LL KI DFG+ R D +R V + +
Sbjct: 129 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAW 184
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEII 620
APE FS SD + FGV L E+
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMF 212
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 150
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 151 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 202
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 132/300 (44%), Gaps = 44/300 (14%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKE-----IAVKRL-SRSSGQGIEEFKTEIALIAQ 474
N+ LG G FG V + GKE +AVK L S + E +E+ +++
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 475 L-QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSL---------------- 517
L QH N+V++LG C ++I EY L ++ +A+ L
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 518 ----LDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARI 573
L+ +A+G+ +L + IHRD+ A NVLL KI DFG+AR
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR- 206
Query: 574 FGGDQIEENTNRVVG-----TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTF 628
I ++N +V +MAPE + +++ +SDV+S+G+LL EI N
Sbjct: 207 ----DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP 262
Query: 629 HLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLLC--VQEQATD 686
+ S + LV + + + A + + S+ ++C A E +C +QEQA +
Sbjct: 263 GILVNSKFYKLVKDGYQMAQPAFAPKNI-YSIMQACWALEPTHRPTFQQICSFLQEQAQE 321
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 144
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 145 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 196
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 197 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 239
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 152
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 153 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 204
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 151
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 152 ---IIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 203
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 151
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 152 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 203
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIE---EFKTEIALIAQLQHRNLVSILG 485
LG GG V+ L++ +++AVK L + F+ E A L H +V++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 486 CCIEEQE----KMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
E ++ EY+ +L + E + + E+I + + + HQ+
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 136
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFG--GDQIEENTNRVVGTYGYMAPEYAM 599
IIHRD+K +N+++ A K+ DFG+AR G+ + + T V+GT Y++PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ-TAAVIGTAQYLSPEQAR 192
Query: 600 EGLFSTKSDVYSFGVLLLEIILG 622
+SDVYS G +L E++ G
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 151
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 152 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 203
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 156
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 157 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 208
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 251
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 168
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 169 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 220
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 263
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV--LQNGK--EIAVKRLSR---SSGQGIEEFKTEIALIAQ 474
D KLG+G FG V +G +GK +AVK L S + +++F E+ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
L HRNL+ + G + KM + E P SL + LL R+ + +A G+
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 124
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGDQIEENTNRVVGTYGY 592
YL R IHRDL A N+LL KI DFG+ R D +R V + +
Sbjct: 125 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAW 180
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEII 620
APE FS SD + FGV L E+
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMF 208
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 428 NKLGEGGFGSVYKG---VLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSIL 484
+KLGEG + +VYKG + N + RL G + E++L+ L+H N+V++
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTLH 66
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
E+ L++EYL +K L Y+ D + K F + + RG+ Y H R +
Sbjct: 67 DIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLF--LFQLLRGLAYCH---RQK 120
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENT--NRVVGTYGYMAPEYAMEGL 602
++HRDLK N+L++ K++DFG+AR I T N VV T Y P+ +
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLAR---AKSIPTKTYDNEVV-TLWYRPPDILLGST 176
Query: 603 -FSTKSDVYSFGVLLLEIILGR 623
+ST+ D++ G + E+ GR
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGR 198
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV--LQNGK--EIAVKRLSR---SSGQGIEEFKTEIALIAQ 474
D KLG+G FG V +G +GK +AVK L S + +++F E+ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
L HRNL+ + G + KM + E P SL + LL R+ + +A G+
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 124
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGDQIEENTNRVVGTYGY 592
YL R IHRDL A N+LL KI DFG+ R D +R V + +
Sbjct: 125 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAW 180
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEII 620
APE FS SD + FGV L E+
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMF 208
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 168
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 169 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGYVATRWYRAPEIMLNW 220
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 263
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 14/200 (7%)
Query: 428 NKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIE---EFKTEIALIAQLQHRNLVSI 483
+ LG G FG V G Q G ++AVK L+R + ++ + K EI + +H +++ +
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 484 LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRL 543
+ ++ EY+ L YI + ++ + F+ I + Y H R
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ---QILSAVDYCH---RH 130
Query: 544 RIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLF 603
++HRDLK NVLLDA MN KI+DFG++ + + + G+ Y APE L+
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS---CGSPNYAAPEVISGRLY 187
Query: 604 S-TKSDVYSFGVLLLEIILG 622
+ + D++S GV+L ++ G
Sbjct: 188 AGPEVDIWSCGVILYALLCG 207
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 116/249 (46%), Gaps = 36/249 (14%)
Query: 430 LGEGGFGSVY--------KGVLQNGKEIAVKRLSR-SSGQGIEEFKTEIALIAQL-QHRN 479
LGEG FG V K + +AVK L ++ + + + +E+ ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYI-------------FDEAKRSLLDWSKRFEI 526
++++LG C ++ +I Y +L Y+ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGGDQIEENTNR 585
+ARG+ YL + + IHRDL A NVL+ KI+DFG+AR I D ++ TN
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWD 645
+ +MAPE + +++ +SDV+SFGVL+ EI F L V ++
Sbjct: 220 RLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEI--------FTLGGSPYPGIPVEELFK 270
Query: 646 LWKEGTAME 654
L KEG M+
Sbjct: 271 LLKEGHRMD 279
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIE---EFKTEIALIAQLQHRNLVSILG 485
LG GG V+ L++ +++AVK L + F+ E A L H +V++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 486 CCIEEQE----KMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
E ++ EY+ +L + E + + E+I + + + HQ+
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 136
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFG--GDQIEENTNRVVGTYGYMAPEYAM 599
IIHRD+K +N+++ A K+ DFG+AR G+ + + T V+GT Y++PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ-TAAVIGTAQYLSPEQAR 192
Query: 600 EGLFSTKSDVYSFGVLLLEIILG 622
+SDVYS G +L E++ G
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV--LQNGK--EIAVKRLSR---SSGQGIEEFKTEIALIAQ 474
D KLG+G FG V +G +GK +AVK L S + +++F E+ +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
L HRNL+ + G + KM + E P SL + LL R+ + +A G+
Sbjct: 78 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 134
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGDQIEENTNRVVGTYGY 592
YL R IHRDL A N+LL KI DFG+ R D +R V + +
Sbjct: 135 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAW 190
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEII 620
APE FS SD + FGV L E+
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMF 218
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV--LQNGK--EIAVKRLSR---SSGQGIEEFKTEIALIAQ 474
D KLG+G FG V +G +GK +AVK L S + +++F E+ +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
L HRNL+ + G + KM + E P SL + LL R+ + +A G+
Sbjct: 72 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 128
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGDQIEENTNRVVGTYGY 592
YL R IHRDL A N+LL KI DFG+ R D +R V + +
Sbjct: 129 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAW 184
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEII 620
APE FS SD + FGV L E+
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMF 212
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 430 LGEGGFGSVY--KGVLQNGKEIAVKRLSRS--SGQGIEEFKTEIALIAQLQHRNLVSILG 485
+G+G F V + +L GKE+AVK + ++ + +++ E+ ++ L H N+V +
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
E+ L+ EY + Y+ + + +F I + Y HQ I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQKF---I 134
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFG-GDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
+HRDLKA N+LLDA MN KI+DFG + F G++++ AP YA LF
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCG---------APPYAAPELFQ 185
Query: 605 TKS------DVYSFGVLLLEIILG 622
K DV+S GV+L ++ G
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 29/205 (14%)
Query: 430 LGEGGFGSVY--KGVLQNGKEIAVKRLSRS--SGQGIEEFKTEIALIAQLQHRNLVSILG 485
+G+G F V + +L G+E+A+K + ++ + +++ E+ ++ L H N+V +
Sbjct: 20 IGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 78
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
E+ LI EY + Y+ + + +F I + Y HQ RI
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCHQK---RI 132
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIF--GGDQIEENTNRVVGTYGYMAPEYAMEGLF 603
+HRDLKA N+LLDA MN KI+DFG + F GG + G+ Y APE LF
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-----KLDTFCGSPPYAAPE-----LF 182
Query: 604 STKS------DVYSFGVLLLEIILG 622
K DV+S GV+L ++ G
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV--LQNGK--EIAVKRLSR---SSGQGIEEFKTEIALIAQ 474
D KLG+G FG V +G +GK +AVK L S + +++F E+ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
L HRNL+ + G + KM + E P SL + LL R+ + +A G+
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 124
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGDQIEENTNRVVGTYGY 592
YL R IHRDL A N+LL KI DFG+ R D +R V + +
Sbjct: 125 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAW 180
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEII 620
APE FS SD + FGV L E+
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMF 208
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV--LQNGK--EIAVKRLSR---SSGQGIEEFKTEIALIAQ 474
D KLG+G FG V +G +GK +AVK L S + +++F E+ +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
L HRNL+ + G + KM + E P SL + LL R+ + +A G+
Sbjct: 78 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 134
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGDQIEENTNRVVGTYGY 592
YL R IHRDL A N+LL KI DFG+ R D +R V + +
Sbjct: 135 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAW 190
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEII 620
APE FS SD + FGV L E+
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMF 218
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KSQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+ R ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDSELKILDFGLCR-----HTDDEMTGYVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 25/203 (12%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRS--SGQGIEEFKTEIALIAQLQHRNLVSILGC 486
+G+G F V + GKE+AVK + ++ + +++ E+ ++ L H N+V +
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 487 CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRII 546
E+ L+ EY + Y+ + + +F I + Y HQ I+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQKF---IV 135
Query: 547 HRDLKASNVLLDAAMNPKISDFGMARIFG-GDQIEENTNRVVGTYGYMAPEYAMEGLFST 605
HRDLKA N+LLDA MN KI+DFG + F G++++ G+ Y APE LF
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT----FCGSPPYAAPE-----LFQG 186
Query: 606 KS------DVYSFGVLLLEIILG 622
K DV+S GV+L ++ G
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 152
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR + V T Y APE +
Sbjct: 153 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLNW 204
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 29/205 (14%)
Query: 430 LGEGGFGSVY--KGVLQNGKEIAVKRLSRS--SGQGIEEFKTEIALIAQLQHRNLVSILG 485
+G+G F V + +L G+E+A+K + ++ + +++ E+ ++ L H N+V +
Sbjct: 23 IGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
E+ LI EY + Y+ + + +F I + Y HQ RI
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCHQK---RI 135
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIF--GGDQIEENTNRVVGTYGYMAPEYAMEGLF 603
+HRDLKA N+LLDA MN KI+DFG + F GG + G Y APE LF
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-----KLDAFCGAPPYAAPE-----LF 185
Query: 604 STKS------DVYSFGVLLLEIILG 622
K DV+S GV+L ++ G
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 16/210 (7%)
Query: 420 ATNDFSSDNK---LGEGGFGSVYK-GVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQL 475
A N F + +K LG G FG V+K G ++A K + + EE K EI+++ QL
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEA-KRSLLDWSKRFEIICGIARGI 534
H NL+ + + + +L+ EY+ L I DE+ + LD + IC GI
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQIC---EGI 200
Query: 535 LYLHQDSRLRIIHRDLKASNVLL--DAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
++HQ + I+H DLK N+L A KI DFG+AR + + E GT +
Sbjct: 201 RHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRY---KPREKLKVNFGTPEF 254
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE S +D++S GV+ ++ G
Sbjct: 255 LAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 152
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR + V T Y APE +
Sbjct: 153 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLNW 204
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 430 LGEGGFGSVY--KGVLQNGKEIAVKRLSRS--SGQGIEEFKTEIALIAQLQHRNLVSILG 485
+G+G F V + +L GKE+AVK + ++ + +++ E+ ++ L H N+V +
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
E+ L+ EY + Y+ + + +F I + Y HQ I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQKF---I 134
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFG-GDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
+HRDLKA N+LLDA MN KI+DFG + F G+++ + G+ Y APE LF
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL----DTFCGSPPYAAPE-----LFQ 185
Query: 605 TKS------DVYSFGVLLLEIILG 622
K DV+S GV+L ++ G
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 152
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR + V T Y APE +
Sbjct: 153 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLNW 204
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 10/195 (5%)
Query: 429 KLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
K+GEG G V +G+++AVK + Q E E+ ++ QH N+V +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ +E ++ E+L +L D + L+ + + + + + YLH +IH
Sbjct: 112 LVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIH 164
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKS 607
RD+K+ ++LL K+SDFG D +VGT +MAPE L++T+
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 608 DVYSFGVLLLEIILG 622
D++S G++++E++ G
Sbjct: 223 DIWSLGIMVIEMVDG 237
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 39/237 (16%)
Query: 410 PVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEI 469
P DL N+ +G G +G+VYKG L + + +AVK S ++ Q K I
Sbjct: 8 PSLDLDNLKLL-------ELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKN-I 58
Query: 470 ALIAQLQHRNLVS-ILG----CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF 524
+ ++H N+ I+G E +L+ EY PN SL Y+ DW
Sbjct: 59 YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSC 114
Query: 525 EIICGIARGILYLHQD------SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQ 578
+ + RG+ YLH + + I HRDL + NVL+ ISDFG++ G++
Sbjct: 115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174
Query: 579 I----EENTNRV--VGTYGYMAPEYAMEGLFSTKS--------DVYSFGVLLLEIIL 621
+ EE+ + VGT YMAPE +EG + + D+Y+ G++ EI +
Sbjct: 175 LVRPGEEDNAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIFM 230
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 28/215 (13%)
Query: 423 DFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
DF +G GGFG V+K + +GK +KR+ ++ E+ + E+ +A+L H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIV 67
Query: 482 SILGC--------------CIEEQEKMLI--YEYLPNKSLDVYIFDEAKRSLLDWSKRFE 525
GC + K L E+ +L+ +I ++ + LD E
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALE 126
Query: 526 IICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR 585
+ I +G+ Y+H ++I+RDLK SN+ L KI DFG+ D R
Sbjct: 127 LFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG---KRXR 180
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
GT YM+PE + + D+Y+ G++L E++
Sbjct: 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LS+ I +T E+ L+ ++H N++ +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 157
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DFG+AR ++ V T Y APE +
Sbjct: 158 ---IIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 209
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 252
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI D+G+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDYGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 14/197 (7%)
Query: 429 KLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
K+GEG G V ++ GK++AVK++ Q E E+ ++ H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ E ++ E+L +L D + ++ + + + R + YLH +IH
Sbjct: 112 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIH 164
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR--VVGTYGYMAPEYAMEGLFST 605
RD+K+ ++LL + K+SDFG F +E R +VGT +MAPE + T
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFG----FCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGT 220
Query: 606 KSDVYSFGVLLLEIILG 622
+ D++S G++++E+I G
Sbjct: 221 EVDIWSLGIMVIEMIDG 237
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 27/211 (12%)
Query: 429 KLGEGGFGSVYKGVLQNGK-EIAVKRLSRSS---------GQGIEEFK----TEIALIAQ 474
KLG G +G V +NG E A+K + +S + IE+F EI+L+
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
L H N++ + +++ L+ E+ L I + R D I+ I GI
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGI 159
Query: 535 LYLHQDSRLRIIHRDLKASNVLLD---AAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
YLH+ + I+HRD+K N+LL+ + +N KI DFG++ F D +GT
Sbjct: 160 CYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY---KLRDRLGTAY 213
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y+APE ++ ++ K DV+S GV++ ++ G
Sbjct: 214 YIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 89
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDET-------CTRF-YTAEI 141
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 198
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E S SD+++ G ++ +++ G
Sbjct: 199 QYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 426 SDNKLGEGGFGSVYKGVLQ-----NGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D +LG G FG+V KG Q + + + + +E E ++ QL + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V ++G C E + ML+ E L+ Y+ + R + D E++ ++ G+ YL +
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEES 130
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG-----YMAP 595
+ +HRDL A NVLL KISDFG+++ D EN + T+G + AP
Sbjct: 131 N---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD---ENXYK-AQTHGKWPVKWYAP 183
Query: 596 EYAMEGLFSTKSDVYSFGVLLLE 618
E FS+KSDV+SFGVL+ E
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWE 206
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIE---EFKTEIALIAQLQHRNLVSILG 485
LG GG V+ L+ +++AVK L + F+ E A L H +V++
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 486 CCIEEQE----KMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
E ++ EY+ +L + E + + E+I + + + HQ+
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 136
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFG--GDQIEENTNRVVGTYGYMAPEYAM 599
IIHRD+K +N+++ A K+ DFG+AR G+ + + T V+GT Y++PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ-TAAVIGTAQYLSPEQAR 192
Query: 600 EGLFSTKSDVYSFGVLLLEIILG 622
+SDVYS G +L E++ G
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 426 SDNKLGEGGFGSVYKGVLQ-----NGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D +LG G FG+V KG Q + + + + +E E ++ QL + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V ++G C E + ML+ E L+ Y+ + R + D E++ ++ G+ YL +
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEES 146
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG-----YMAP 595
+ +HRDL A NVLL KISDFG+++ D EN + T+G + AP
Sbjct: 147 N---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD---ENYYK-AQTHGKWPVKWYAP 199
Query: 596 EYAMEGLFSTKSDVYSFGVLLLE 618
E FS+KSDV+SFGVL+ E
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 426 SDNKLGEGGFGSVYKGVLQ-----NGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D +LG G FG+V KG Q + + + + +E E ++ QL + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V ++G C E + ML+ E L+ Y+ + R + D E++ ++ G+ YL +
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEES 146
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG-----YMAP 595
+ +HRDL A NVLL KISDFG+++ D EN + T+G + AP
Sbjct: 147 N---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD---ENYYK-AQTHGKWPVKWYAP 199
Query: 596 EYAMEGLFSTKSDVYSFGVLLLE 618
E FS+KSDV+SFGVL+ E
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 426 SDNKLGEGGFGSVYKGVLQ-----NGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D +LG G FG+V KG Q + + + + +E E ++ QL + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V ++G C E + ML+ E L+ Y+ + R + D E++ ++ G+ YL +
Sbjct: 89 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEES 144
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG-----YMAP 595
+ +HRDL A NVLL KISDFG+++ D EN + T+G + AP
Sbjct: 145 N---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD---ENYYK-AQTHGKWPVKWYAP 197
Query: 596 EYAMEGLFSTKSDVYSFGVLLLE 618
E FS+KSDV+SFGVL+ E
Sbjct: 198 ECINYYKFSSKSDVWSFGVLMWE 220
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 426 SDNKLGEGGFGSVYKGVLQ-----NGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D +LG G FG+V KG Q + + + + +E E ++ QL + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V ++G C E + ML+ E L+ Y+ + R + D E++ ++ G+ YL +
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEES 130
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG-----YMAP 595
+ +HRDL A NVLL KISDFG+++ D EN + T+G + AP
Sbjct: 131 N---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD---ENYYK-AQTHGKWPVKWYAP 183
Query: 596 EYAMEGLFSTKSDVYSFGVLLLE 618
E FS+KSDV+SFGVL+ E
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWE 206
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 426 SDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQG-----IEEFKTEIALIAQLQHRNL 480
D +LG G FG+V KG Q K + + + +E E ++ QL + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V ++G C E + ML+ E L+ Y+ + R + D E++ ++ G+ YL +
Sbjct: 71 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEES 126
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG-----YMAP 595
+ +HRDL A NVLL KISDFG+++ D EN + T+G + AP
Sbjct: 127 N---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD---ENYYK-AQTHGKWPVKWYAP 179
Query: 596 EYAMEGLFSTKSDVYSFGVLLLE 618
E FS+KSDV+SFGVL+ E
Sbjct: 180 ECINYYKFSSKSDVWSFGVLMWE 202
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 21/202 (10%)
Query: 427 DNKLGEGGFGSVYKGVLQ-----NGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
D +LG G FG+V KG Q + + + + +E E ++ QL + +V
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
++G C E + ML+ E L+ Y+ + R + D E++ ++ G+ YL + +
Sbjct: 435 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEESN 490
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG-----YMAPE 596
+HRDL A NVLL KISDFG+++ D EN + T+G + APE
Sbjct: 491 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD---ENYYKAQ-THGKWPVKWYAPE 543
Query: 597 YAMEGLFSTKSDVYSFGVLLLE 618
FS+KSDV+SFGVL+ E
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWE 565
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 430 LGEGGFGSVY--KGVLQNGKEIAVKRLSRS--SGQGIEEFKTEIALIAQLQHRNLVSILG 485
+G+G F V + +L GKE+AV+ + ++ + +++ E+ ++ L H N+V +
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
E+ L+ EY + Y+ + + +F I + Y HQ I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQKF---I 134
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFG-GDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
+HRDLKA N+LLDA MN KI+DFG + F G++++ G+ Y APE LF
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT----FCGSPPYAAPE-----LFQ 185
Query: 605 TKS------DVYSFGVLLLEIILG 622
K DV+S GV+L ++ G
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 426 SDNKLGEGGFGSVYKGVLQ-----NGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D +LG G FG+V KG Q + + + + +E E ++ QL + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V ++G C E + ML+ E L+ Y+ + R + D E++ ++ G+ YL +
Sbjct: 69 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEES 124
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG-----YMAP 595
+ +HRDL A NVLL KISDFG+++ D EN + T+G + AP
Sbjct: 125 N---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD---ENYYK-AQTHGKWPVKWYAP 177
Query: 596 EYAMEGLFSTKSDVYSFGVLLLE 618
E FS+KSDV+SFGVL+ E
Sbjct: 178 ECINYYKFSSKSDVWSFGVLMWE 200
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 21/202 (10%)
Query: 427 DNKLGEGGFGSVYKGVLQ-----NGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
D +LG G FG+V KG Q + + + + +E E ++ QL + +V
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
++G C E + ML+ E L+ Y+ + R + D E++ ++ G+ YL + +
Sbjct: 434 RMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEESN 489
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG-----YMAPE 596
+HRDL A NVLL KISDFG+++ D EN + T+G + APE
Sbjct: 490 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD---ENYYK-AQTHGKWPVKWYAPE 542
Query: 597 YAMEGLFSTKSDVYSFGVLLLE 618
FS+KSDV+SFGVL+ E
Sbjct: 543 CINYYKFSSKSDVWSFGVLMWE 564
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYK------GVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQL 475
+DF ++LG G G V+K G++ K I ++ Q I E + ++ +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 64
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+V G + E + E++ SLD + +A R + I + +G+
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSI--AVIKGLT 121
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
YL + + +I+HRD+K SN+L+++ K+ DFG++ G I+E N VGT YM+P
Sbjct: 122 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDEMANEFVGTRSYMSP 175
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGR 623
E +S +SD++S G+ L+E+ +GR
Sbjct: 176 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 10/211 (4%)
Query: 417 IAAATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEE--FKTEIALIA 473
+ + D+ +G G +G K + +GK + K L S E+ +E+ L+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 474 QLQHRNLVSILGCCIEEQEKML--IYEYLPNKSLDVYIFDEAK-RSLLDWSKRFEIICGI 530
+L+H N+V I+ L + EY L I K R LD ++ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 531 ARGILYLHQ--DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
+ H+ D ++HRDLK +NV LD N K+ DFG+ARI D T VG
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVG 178
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEI 619
T YM+PE ++ KSD++S G LL E+
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 14/198 (7%)
Query: 430 LGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEE--FKTEIALIAQLQHRNLVSILGC 486
+GEG +G V K ++ G+ +A+K+ S + + EI L+ QL+H NLV++L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 487 CIEEQEKMLIYEYLPNKSL-DVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
C +++ L++E++ + L D+ +F LD+ + + I GI + H + I
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNG----LDYQVVQKYLFQIINGIGFCHSHN---I 145
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGL-FS 604
IHRD+K N+L+ + K+ DFG AR E + V T Y APE + + +
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--EVYDDEVATRWYRAPELLVGDVKYG 203
Query: 605 TKSDVYSFGVLLLEIILG 622
DV++ G L+ E+ +G
Sbjct: 204 KAVDVWAIGCLVTEMFMG 221
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 416 NIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRS---SGQGIEEFKTEIAL 471
I DF LG+G FG V+ + + A+K L + +E E +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 472 IAQLQHRNLVSILGCCIEEQEKML-IYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGI 530
++ ++ + C + +E + + EYL L +I K D S+ I
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEI 128
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR--IFGGDQIEENTNRVVG 588
G+ +LH I++RDLK N+LLD + KI+DFGM + + G + TN G
Sbjct: 129 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG----DAKTNEFCG 181
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFH 629
T Y+APE + ++ D +SFGVLL E+++G+ + FH
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFH 220
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 23/202 (11%)
Query: 428 NKLGEGGFG-SVYKGVLQNGKEIAVKRL--SRSSGQGIEEFKTEIALIAQLQHRNLVSIL 484
K+GEG FG ++ ++G++ +K + SR S + EE + E+A++A ++H N+V
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYI-------FDEAKRSLLDWSKRFEIICGIARGILYL 537
E ++ +Y L I F E + +LDW F IC L L
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQ--ILDW---FVQIC------LAL 138
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEY 597
+I+HRD+K+ N+ L ++ DFG+AR+ + E +GT Y++PE
Sbjct: 139 KHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYLSPEI 196
Query: 598 AMEGLFSTKSDVYSFGVLLLEI 619
++ KSD+++ G +L E+
Sbjct: 197 CENKPYNNKSDIWALGCVLYEL 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIE---EFKTEIALIAQLQHRNLVSILG 485
LG GG V+ L+ +++AVK L + F+ E A L H +V++
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 486 CCIEEQE----KMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
E ++ EY+ +L + E + + E+I + + + HQ+
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 136
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFG--GDQIEENTNRVVGTYGYMAPEYAM 599
IIHRD+K +N+++ A K+ DFG+AR G+ + + T V+GT Y++PE A
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ-TAAVIGTAQYLSPEQAR 192
Query: 600 EGLFSTKSDVYSFGVLLLEIILG 622
+SDVYS G +L E++ G
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 426 SDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQG-----IEEFKTEIALIAQLQHRNL 480
D +LG G FG+V KG Q K + + + +E E ++ QL + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V ++G C E + ML+ E L+ Y+ + R + D E++ ++ G+ YL +
Sbjct: 81 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEES 136
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG-----YMAP 595
+ +HRDL A NVLL KISDFG+++ D EN + T+G + AP
Sbjct: 137 N---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD---ENYYK-AQTHGKWPVKWYAP 189
Query: 596 EYAMEGLFSTKSDVYSFGVLLLE 618
E FS+KSDV+SFGVL+ E
Sbjct: 190 ECINYYKFSSKSDVWSFGVLMWE 212
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 110/213 (51%), Gaps = 15/213 (7%)
Query: 416 NIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLS---RSSGQ-GIEEFKT-EI 469
++ + + + LGEG F +VYK +N +I A+K++ RS + GI EI
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICG 529
L+ +L H N++ +L + L+++++ L+V I D + K + ++
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMT- 121
Query: 530 IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGT 589
+G+ YLHQ I+HRDLK +N+LLD K++DFG+A+ FG ++VV T
Sbjct: 122 -LQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN-RAYXHQVV-T 175
Query: 590 YGYMAPEYAMEG-LFSTKSDVYSFGVLLLEIIL 621
Y APE ++ D+++ G +L E++L
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELLL 208
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI DF +AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFYLAR-----HTDDEMTGYVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 25/205 (12%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G +GSV Y L+ +++AVK+LSR I +T E+ L+ L+H N++ +L
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 485 -----GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQ 539
IE+ ++ + L L+ + +A L D +F ++ + RG+ Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQA---LSDEHVQF-LVYQLLRGLKYIHS 149
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM 599
IIHRDLK SNV ++ +I DFG+AR Q +E V T Y APE +
Sbjct: 150 AG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIML 201
Query: 600 EGL-FSTKSDVYSFGVLLLEIILGR 623
+ ++ D++S G ++ E++ G+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 31/224 (13%)
Query: 415 SNIAAATND------FSSDNKLGEGGFGSVY--KGVLQNGKEIAVKRLSRS--SGQGIEE 464
++I +AT++ + +G+G F V + VL G+E+AVK + ++ + +++
Sbjct: 2 NSITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVL-TGREVAVKIIDKTQLNPTSLQK 60
Query: 465 FKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF 524
E+ ++ L H N+V + E+ L+ EY + Y+ + + +F
Sbjct: 61 LFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 120
Query: 525 EIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTN 584
I + Y HQ I+HRDLKA N+LLD MN KI+DFG + F + +
Sbjct: 121 RQIVS---AVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEF---TVGNKLD 171
Query: 585 RVVGTYGYMAPEYAMEGLFSTKS------DVYSFGVLLLEIILG 622
G+ Y APE LF K DV+S GV+L ++ G
Sbjct: 172 TFCGSPPYAAPE-----LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 39/230 (16%)
Query: 411 VFDLSNIAAATNDFSSDNKLGEGGFGSVY--KGVLQNGKEIAVKRLSR---SSGQGIEEF 465
+F + A ++ + LG+G FG V K + G+E AVK +S+ E
Sbjct: 38 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESL 96
Query: 466 KTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSL-----DVY----IFDEA-KR 515
E+ L+ QL H N+ M +YE+ +K +VY +FDE R
Sbjct: 97 LREVQLLKQLDHPNI-------------MKLYEFFEDKGYFYLVGEVYTGGELFDEIISR 143
Query: 516 SLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAA---MNPKISDFGMAR 572
II + GI Y+H++ +I+HRDLK N+LL++ N +I DFG++
Sbjct: 144 KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 200
Query: 573 IFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
F + + +GT Y+APE + G + K DV+S GV+L ++ G
Sbjct: 201 HF---EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 39/230 (16%)
Query: 411 VFDLSNIAAATNDFSSDNKLGEGGFGSVY--KGVLQNGKEIAVKRLSR---SSGQGIEEF 465
+F + A ++ + LG+G FG V K + G+E AVK +S+ E
Sbjct: 21 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESL 79
Query: 466 KTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSL-----DVY----IFDEA-KR 515
E+ L+ QL H N+ M +YE+ +K +VY +FDE R
Sbjct: 80 LREVQLLKQLDHPNI-------------MKLYEFFEDKGYFYLVGEVYTGGELFDEIISR 126
Query: 516 SLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAA---MNPKISDFGMAR 572
II + GI Y+H++ +I+HRDLK N+LL++ N +I DFG++
Sbjct: 127 KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 183
Query: 573 IFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
F + + +GT Y+APE + G + K DV+S GV+L ++ G
Sbjct: 184 HF---EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 39/230 (16%)
Query: 411 VFDLSNIAAATNDFSSDNKLGEGGFGSVY--KGVLQNGKEIAVKRLSR---SSGQGIEEF 465
+F + A ++ + LG+G FG V K + G+E AVK +S+ E
Sbjct: 15 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESL 73
Query: 466 KTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSL-----DVY----IFDEA-KR 515
E+ L+ QL H N+ M +YE+ +K +VY +FDE R
Sbjct: 74 LREVQLLKQLDHPNI-------------MKLYEFFEDKGYFYLVGEVYTGGELFDEIISR 120
Query: 516 SLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAA---MNPKISDFGMAR 572
II + GI Y+H++ +I+HRDLK N+LL++ N +I DFG++
Sbjct: 121 KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177
Query: 573 IFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
F + + +GT Y+APE + G + K DV+S GV+L ++ G
Sbjct: 178 HF---EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 39/230 (16%)
Query: 411 VFDLSNIAAATNDFSSDNKLGEGGFGSVY--KGVLQNGKEIAVKRLSR---SSGQGIEEF 465
+F + A ++ + LG+G FG V K + G+E AVK +S+ E
Sbjct: 39 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESL 97
Query: 466 KTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSL-----DVY----IFDEA-KR 515
E+ L+ QL H N+ M +YE+ +K +VY +FDE R
Sbjct: 98 LREVQLLKQLDHPNI-------------MKLYEFFEDKGYFYLVGEVYTGGELFDEIISR 144
Query: 516 SLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAA---MNPKISDFGMAR 572
II + GI Y+H++ +I+HRDLK N+LL++ N +I DFG++
Sbjct: 145 KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 201
Query: 573 IFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
F + + +GT Y+APE + G + K DV+S GV+L ++ G
Sbjct: 202 HF---EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 416 NIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRS---SGQGIEEFKTEIAL 471
I DF LG+G FG V+ + + A+K L + +E E +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 472 IAQLQHRNLVSILGCCIEEQEKML-IYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGI 530
++ ++ + C + +E + + EYL L +I K D S+ I
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEI 127
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR--IFGGDQIEENTNRVVG 588
G+ +LH I++RDLK N+LLD + KI+DFGM + + G + TN G
Sbjct: 128 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG----DAKTNXFCG 180
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFH 629
T Y+APE + ++ D +SFGVLL E+++G+ + FH
Sbjct: 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFH 219
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 89
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 141
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 199 QYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 89
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 141
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 67
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 68 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 119
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 120 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 176
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 177 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 90
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 142
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 143 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 199
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 87
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 139
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 87
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 139
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIE---EFKTEIALIAQLQHRNLVSILG 485
LG GG V+ L+ +++AVK L + F+ E A L H +V++
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 96
Query: 486 CCIEEQEK----MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
E ++ EY+ +L + E + + E+I + + + HQ+
Sbjct: 97 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG 153
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFG--GDQIEENTNRVVGTYGYMAPEYAM 599
IIHRD+K +N+++ A K+ DFG+AR G+ + + T V+GT Y++PE A
Sbjct: 154 ---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ-TAAVIGTAQYLSPEQAR 209
Query: 600 EGLFSTKSDVYSFGVLLLEIILG 622
+SDVYS G +L E++ G
Sbjct: 210 GDSVDARSDVYSLGCVLYEVLTG 232
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 92
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 93 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 144
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 145 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 201
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 202 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI FG+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILGFGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 89
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 141
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 433 GGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCIE--- 489
G FG V+K L N +AVK Q + + EI ++H NL+ +
Sbjct: 26 GRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRGSN 83
Query: 490 -EQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD-------- 540
E E LI + SL Y+ K +++ W++ + ++RG+ YLH+D
Sbjct: 84 LEVELWLITAFHDKGSLTDYL----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME 600
+ I HRD K+ NVLL + + ++DFG+A F + +T+ VGT YMAPE +E
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-VLE 198
Query: 601 GLFS------TKSDVYSFGVLLLEII 620
G + + D+Y+ G++L E++
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 90
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 142
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 143 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 199
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 64
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 65 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 116
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 117 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 173
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 174 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGS-VYKGVLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F + V L +E A+K L + I+E K E ++++L
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 87
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 139
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 66
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 67 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 118
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 119 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 175
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 176 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 12/198 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSS----GQGIEEFKTEIALIAQLQHRNLVSILG 485
LG+GGF Y+ + KE+ ++ S E+ TEIA+ L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
++ ++ E +SL + ++++ + R+ + I +G+ YLH + R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 163
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFST 605
IHRDLK N+ L+ M+ KI DFG+A D E + GT Y+APE + S
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKXLCGTPNYIAPEVLCKKGHSF 221
Query: 606 KSDVYSFGVLLLEIILGR 623
+ D++S G +L +++G+
Sbjct: 222 EVDIWSLGCILYTLLVGK 239
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSS--GQGIE-EFKTEIALIAQLQH 477
+DF LG+G FG+VY + I A+K L +S +G+E + + EI + A L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 478 RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRS-LLDWSKRFEIICGIARGILY 536
N++ + + + LI EY P L + E ++S D + I+ +A ++Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGEL----YKELQKSCTFDEQRTATIMEELADALMY 138
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPE 596
H ++IHRD+K N+LL KI+DFG + + T + GT Y+ PE
Sbjct: 139 CHGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKT--MCGTLDYLPPE 191
Query: 597 YAMEGLFSTKSDVYSFGVLLLEIILG 622
+ + K D++ GVL E+++G
Sbjct: 192 MIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 10/211 (4%)
Query: 417 IAAATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEE--FKTEIALIA 473
+ + D+ +G G +G K + +GK + K L S E+ +E+ L+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 474 QLQHRNLVSILGCCIEEQEKML--IYEYLPNKSLDVYIFDEAK-RSLLDWSKRFEIICGI 530
+L+H N+V I+ L + EY L I K R LD ++ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 531 ARGILYLHQ--DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
+ H+ D ++HRDLK +NV LD N K+ DFG+ARI D VG
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT--SFAKAFVG 178
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEI 619
T YM+PE ++ KSD++S G LL E+
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 89
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 141
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 12/198 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSS----GQGIEEFKTEIALIAQLQHRNLVSILG 485
LG+GGF Y+ + KE+ ++ S E+ TEIA+ L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
++ ++ E +SL + ++++ + R+ + I +G+ YLH + R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 163
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFST 605
IHRDLK N+ L+ M+ KI DFG+A D E + GT Y+APE + S
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKTLCGTPNYIAPEVLCKKGHSF 221
Query: 606 KSDVYSFGVLLLEIILGR 623
+ D++S G +L +++G+
Sbjct: 222 EVDIWSLGCILYTLLVGK 239
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 87
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 139
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTA 196
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI D G+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDAGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 89
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 141
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 65
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 66 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 117
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 118 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 174
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 12/198 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSS----GQGIEEFKTEIALIAQLQHRNLVSILG 485
LG+GGF Y+ + KE+ ++ S E+ TEIA+ L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
++ ++ E +SL + ++++ + R+ + I +G+ YLH + R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 163
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFST 605
IHRDLK N+ L+ M+ KI DFG+A D E + GT Y+APE + S
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKDLCGTPNYIAPEVLCKKGHSF 221
Query: 606 KSDVYSFGVLLLEIILGR 623
+ D++S G +L +++G+
Sbjct: 222 EVDIWSLGCILYTLLVGK 239
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 43/229 (18%)
Query: 423 DFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
DF +G GGFG V+K + +GK ++R+ ++ E+ + E+ +A+L H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIV 68
Query: 482 SILGC-------------CIE------EQEK----------MLIYEYLPNKSLDVYIFDE 512
GC +E E K + E+ +L+ +I E
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI--E 126
Query: 513 AKR-SLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMA 571
+R LD E+ I +G+ Y+H ++IHRDLK SN+ L KI DFG+
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
Query: 572 RIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
D R GT YM+PE + + D+Y+ G++L E++
Sbjct: 184 TSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 71
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 72 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 123
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 124 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 180
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 181 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 114/221 (51%), Gaps = 34/221 (15%)
Query: 429 KLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQ-HRNLVSIL 484
KLG+G +G V+K + + G+ +AVK++ + + +T EI ++ +L H N+V++L
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 485 GCCIEEQEK--MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSR 542
+ ++ L+++Y+ D++ A ++L+ + ++ + + I YLH
Sbjct: 76 NVLRADNDRDVYLVFDYM---ETDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLHSGG- 129
Query: 543 LRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQ---------IEENTNRV------- 586
++HRD+K SN+LL+A + K++DFG++R F + I ENT
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 587 ---VGTYGYMAPEYAMEGLFSTKS-DVYSFGVLLLEIILGR 623
V T Y APE + TK D++S G +L EI+ G+
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI D G+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDRGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 86
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 138
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 139 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 195
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 12/198 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSS----GQGIEEFKTEIALIAQLQHRNLVSILG 485
LG+GGF Y+ + KE+ ++ S E+ TEIA+ L + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
++ ++ E +SL + ++++ + R+ + I +G+ YLH + R+
Sbjct: 94 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 147
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFST 605
IHRDLK N+ L+ M+ KI DFG+A D E + GT Y+APE + S
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKDLCGTPNYIAPEVLCKKGHSF 205
Query: 606 KSDVYSFGVLLLEIILGR 623
+ D++S G +L +++G+
Sbjct: 206 EVDIWSLGCILYTLLVGK 223
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEFKT-----EIALIAQL 475
DF LGEG F +V L +E A+K L + I+E K E ++++L
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 86
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGI 530
H V + ++++ Y N L YI FDE RF I
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRF-YTAEI 138
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTY 590
+ YLH IIHRDLK N+LL+ M+ +I+DFG A++ + + N VGT
Sbjct: 139 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 195
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y++PE E SD+++ G ++ +++ G
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 25/205 (12%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G +GSV Y L+ +++AVK+LSR I +T E+ L+ L+H N++ +L
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 485 -----GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQ 539
IE+ ++ + L L+ + +A L D +F ++ + RG+ Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA---LSDEHVQF-LVYQLLRGLKYIHS 141
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM 599
IIHRDLK SNV ++ +I DFG+AR Q +E V T Y APE +
Sbjct: 142 AG---IIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTGYVATRWYRAPEIML 193
Query: 600 EGL-FSTKSDVYSFGVLLLEIILGR 623
+ ++ D++S G ++ E++ G+
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 31/206 (15%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRS--SGQGIEEFKTEIALIAQLQHRNLVSILGC 486
+G+G F V + GKE+AVK + ++ + +++ E+ ++ L H N+V +
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 487 CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICG---IARGILYLHQDSRL 543
E+ L+ EY + Y+ W K E I + Y HQ
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHG------WMKEKEARAKFRQIVSAVQYCHQKF-- 126
Query: 544 RIIHRDLKASNVLLDAAMNPKISDFGMARIFG-GDQIEENTNRVVGTYGYMAPEYAMEGL 602
I+HRDLKA N+LLDA MN KI+DFG + F G+++ + G+ Y APE L
Sbjct: 127 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL----DTFCGSPPYAAPE-----L 176
Query: 603 FSTKS------DVYSFGVLLLEIILG 622
F K DV+S GV+L ++ G
Sbjct: 177 FQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 420 ATNDFSSDNKLGEGGFGSVYK-GVLQNGKEIAVKRLSRS---SGQGIEEFKTEIALIAQL 475
+ DF LG G FG V+ NG+ A+K L + + +E E +++ +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFE------IICG 529
H ++ + G + Q+ +I +Y+ L SLL S+RF
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGEL---------FSLLRKSQRFPNPVAKFYAAE 114
Query: 530 IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGT 589
+ + YLH II+RDLK N+LLD + KI+DFG A+ + + T + GT
Sbjct: 115 VCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVTYXLCGT 166
Query: 590 YGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y+APE ++ D +SFG+L+ E++ G
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 27/204 (13%)
Query: 430 LGEGGFGSVY--KGVLQNGKEIAVKRLSRS--SGQGIEEFKTEIALIAQLQHRNLVSILG 485
+G+G F V + +L GKE+AVK + ++ + +++ E+ + L H N+V +
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFE 80
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
E+ L+ EY + Y+ + + +F I + Y HQ I
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS---AVQYCHQKF---I 134
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFG-GDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
+HRDLKA N+LLDA N KI+DFG + F G++++ AP YA LF
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCG---------APPYAAPELFQ 185
Query: 605 TKS------DVYSFGVLLLEIILG 622
K DV+S GV+L ++ G
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 19/208 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYK------GVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQL 475
+DF ++LG G G V+K G++ K I ++ Q I E + ++ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+V G + E + E++ SLD + +A R + I + +G+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSI--AVIKGLT 118
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
YL + + +I+HRD+K SN+L+++ K+ DFG++ G I+ N VGT YM+P
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 172
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGR 623
E +S +SD++S G+ L+E+ +GR
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 19/208 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYK------GVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQL 475
+DF ++LG G G V+K G++ K I ++ Q I E + ++ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+V G + E + E++ SLD + +A R + I + +G+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSI--AVIKGLT 118
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
YL + + +I+HRD+K SN+L+++ K+ DFG++ G I+ N VGT YM+P
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 172
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGR 623
E +S +SD++S G+ L+E+ +GR
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSILGC 486
+G G +GSV + G +AVK+LSR I +T E+ L+ ++H N++ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 487 -----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+EE + + +L L+ + + L D +F +I I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-LIYQILRGLKYIHSAD 145
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
IIHRDLK SN+ ++ KI D G+AR ++ V T Y APE +
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDGGLAR-----HTDDEMTGYVATRWYRAPEIMLNW 197
Query: 602 L-FSTKSDVYSFGVLLLEIILGRR--NNTFHLEQGSGSWNLVG 641
+ ++ D++S G ++ E++ GR T H++Q LVG
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 24/204 (11%)
Query: 433 GGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGC----CI 488
G FG V+K L N + +AVK Q + + E+ + ++H N++ +G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRGTS 92
Query: 489 EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD-------S 541
+ + LI + SL ++ K +++ W++ I +ARG+ YLH+D
Sbjct: 93 VDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
+ I HRD+K+ NVLL + I+DFG+A F + +T+ VGT YMAPE +EG
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLEG 207
Query: 602 LFS------TKSDVYSFGVLLLEI 619
+ + D+Y+ G++L E+
Sbjct: 208 AINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 110/224 (49%), Gaps = 23/224 (10%)
Query: 422 NDFSSDNKLGEGGFGSVYK------GVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQL 475
+DF ++LG G G V+K G++ K I ++ Q I E + ++ +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 80
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+V G + E + E++ SLD + +A R + I + +G+
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSI--AVIKGLT 137
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
YL + + +I+HRD+K SN+L+++ K+ DFG++ G I+ N VGT YM+P
Sbjct: 138 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 191
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNL 639
E +S +SD++S G+ L+E+ +GR + + GSGS +
Sbjct: 192 ERLQGTHYSVQSDIWSMGLSLVEMAVGR----YPIGSGSGSMAI 231
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 19/208 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYK------GVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQL 475
+DF ++LG G G V+K G++ K I ++ Q I E + ++ +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 123
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+V G + E + E++ SLD + +A R + I + +G+
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSI--AVIKGLT 180
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
YL + + +I+HRD+K SN+L+++ K+ DFG++ G I+ N VGT YM+P
Sbjct: 181 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 234
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGR 623
E +S +SD++S G+ L+E+ +GR
Sbjct: 235 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 422 NDFSSDNKLGEGGFGSVYKG-VLQNGKEIAVKRLSRS---SGQGIEEFKTEIALIAQLQH 477
++F LG+G FG V V + G AVK L + +E TE +++ ++
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 478 RNLVSILGCCIEEQEKML-IYEYLPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGIA 531
++ L CC + +++ + E++ L +I FDEA+ RF I
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEAR-------ARF-YAAEII 134
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR--IFGGDQIEENTNRVVGT 589
+++LH II+RDLK NVLLD + K++DFGM + I G T GT
Sbjct: 135 SALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG----VTTATFCGT 187
Query: 590 YGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
Y+APE E L+ D ++ GVLL E++ G
Sbjct: 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH 221
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 25/205 (12%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G +GSV Y L+ +++AVK+LSR I +T E+ L+ L+H N++ +L
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 485 -----GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQ 539
IE+ ++ + L L+ + +A L D +F ++ + RG+ Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA---LSDEHVQF-LVYQLLRGLKYIHS 149
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM 599
IIHRDLK SNV ++ +I DFG+AR Q +E V T Y APE +
Sbjct: 150 AG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIML 201
Query: 600 EGL-FSTKSDVYSFGVLLLEIILGR 623
+ ++ D++S G ++ E++ G+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 19/208 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYK------GVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQL 475
+DF ++LG G G V+K G++ K I ++ Q I E + ++ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+V G + E + E++ SLD + +A R + I + +G+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSI--AVIKGLT 118
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
YL + + +I+HRD+K SN+L+++ K+ DFG++ G I+ N VGT YM+P
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 172
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGR 623
E +S +SD++S G+ L+E+ +GR
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 22/202 (10%)
Query: 430 LGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEE--FKTEIALIAQLQHRNLVSILGC 486
LG+G FG V K + +E AVK ++++S + + E+ L+ +L H N++ +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 487 CIEEQEKMLIYEYLPNKSLDVYIFDEA-KRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
+ ++ E L FDE KR II + GI Y+H+ + I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 546 IHRDLKASNVLLDAA---MNPKISDFGMARIFGGDQIEENTNRV--VGTYGYMAPEYAME 600
+HRDLK N+LL++ + KI DFG++ F ++NT +GT Y+APE +
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNTKMKDRIGTAYYIAPE-VLR 196
Query: 601 GLFSTKSDVYSFGVLLLEIILG 622
G + K DV+S GV+L ++ G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 22/202 (10%)
Query: 430 LGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEE--FKTEIALIAQLQHRNLVSILGC 486
LG+G FG V K + +E AVK ++++S + + E+ L+ +L H N++ +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 487 CIEEQEKMLIYEYLPNKSLDVYIFDEA-KRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
+ ++ E L FDE KR II + GI Y+H+ + I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 546 IHRDLKASNVLLDAA---MNPKISDFGMARIFGGDQIEENTNRV--VGTYGYMAPEYAME 600
+HRDLK N+LL++ + KI DFG++ F ++NT +GT Y+APE +
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNTKMKDRIGTAYYIAPE-VLR 196
Query: 601 GLFSTKSDVYSFGVLLLEIILG 622
G + K DV+S GV+L ++ G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 19/208 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYK------GVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQL 475
+DF ++LG G G V+K G++ K I ++ Q I E + ++ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+V G + E + E++ SLD + +A R + I + +G+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSI--AVIKGLT 118
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
YL + + +I+HRD+K SN+L+++ K+ DFG++ G I+ N VGT YM+P
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 172
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGR 623
E +S +SD++S G+ L+E+ +GR
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 19/208 (9%)
Query: 422 NDFSSDNKLGEGGFGSVYK------GVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQL 475
+DF ++LG G G V+K G++ K I ++ Q I E + ++ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+V G + E + E++ SLD + +A R + I + +G+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSI--AVIKGLT 118
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
YL + + +I+HRD+K SN+L+++ K+ DFG++ G I+ N VGT YM+P
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 172
Query: 596 EYAMEGLFSTKSDVYSFGVLLLEIILGR 623
E +S +SD++S G+ L+E+ +GR
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 105/225 (46%), Gaps = 24/225 (10%)
Query: 414 LSNIAAATNDFSSDNKLGEGGFGSVYKGVLQNGK----EIAVKRLSRS--SGQGIEEFKT 467
L ++ F+ LG+G FGSV + L+ ++AVK L + IEEF
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 468 EIALIAQLQHRNLVSILGCCIEEQEK------MLIYEYLPNKSLDVYIFDEAKRS----- 516
E A + + H ++ ++G + + K M+I ++ K D++ F A R
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFM--KHGDLHAFLLASRIGENPF 132
Query: 517 LLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFG 575
L + IA G+ YL S IHRDL A N +L M ++DFG++R I+
Sbjct: 133 NLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYS 189
Query: 576 GDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
GD + + ++A E + L++ SDV++FGV + EI+
Sbjct: 190 GDYYRQGCASKLPV-KWLALESLADNLYTVHSDVWAFGVTMWEIM 233
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 114/238 (47%), Gaps = 20/238 (8%)
Query: 393 RVDAAELDDSRRNSEYLPVFDLSNIAAATND-FSSDNKLGEGGFGSVYK------GVLQN 445
+++ ELD+ +R + + +D F ++LG G G V+K G++
Sbjct: 3 KLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA 62
Query: 446 GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSL 505
K I ++ Q I E + ++ + +V G + E + E++ SL
Sbjct: 63 RKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL 118
Query: 506 DVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKI 565
D + +A R + I + +G+ YL + + +I+HRD+K SN+L+++ K+
Sbjct: 119 D-QVLKKAGRIPEQILGKVSI--AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKL 173
Query: 566 SDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
DFG++ G I+ N VGT YM+PE +S +SD++S G+ L+E+ +GR
Sbjct: 174 CDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 35/227 (15%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQ-GIEEFKTEIALIAQLQHRN 479
DF LG GGFG V++ + + A+KR+ + + E+ E+ +A+L+H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEA----KRSLLDW------------SKR 523
+V +E+ E L S VY++ + K +L DW S
Sbjct: 65 IVRYFNAWLEKNTT----EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 524 FEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENT 583
I IA + +LH ++HRDLK SN+ K+ DFG+ D+ E+
Sbjct: 121 LHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 584 ----------NRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
VGT YM+PE +S K D++S G++L E++
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y V N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 89 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 145 ---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y V N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 89 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 145 ---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 22/202 (10%)
Query: 430 LGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEE--FKTEIALIAQLQHRNLVSILGC 486
LG+G FG V K + +E AVK ++++S + + E+ L+ +L H N++ +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 487 CIEEQEKMLIYEYLPNKSLDVYIFDEA-KRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
+ ++ E L FDE KR II + GI Y+H+ + I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 546 IHRDLKASNVLLDAAM---NPKISDFGMARIFGGDQIEENTNRV--VGTYGYMAPEYAME 600
+HRDLK N+LL++ + KI DFG++ F ++NT +GT Y+APE +
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNTKMKDRIGTAYYIAPE-VLR 196
Query: 601 GLFSTKSDVYSFGVLLLEIILG 622
G + K DV+S GV+L ++ G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y V N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 89 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 145 ---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y V N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 91 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 146
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 147 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y V N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 89 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 145 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y V N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 109 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 164
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 165 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 119/255 (46%), Gaps = 29/255 (11%)
Query: 382 TYINAGQDLYVRVDAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYKG 441
TYI G+ L D E S + LP+ IA ++G+G +G V+ G
Sbjct: 3 TYIPPGESLR---DLIEQSQSSGSGSGLPLLVQRTIA---KQIQMVKQIGKGRYGEVWMG 56
Query: 442 VLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCIEEQ----EKMLIY 497
+ G+++AVK + ++ + +TEI ++H N++ + I+ + LI
Sbjct: 57 KWR-GEKVAVK-VFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLIT 114
Query: 498 EYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD-----SRLRIIHRDLKA 552
+Y N SL +D K + LD ++ G+ +LH + + I HRDLK+
Sbjct: 115 DYHENGSL----YDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKS 170
Query: 553 SNVLLDAAMNPKISDFGMARIFGGD--QIEENTNRVVGTYGYMAPEYAMEGL----FST- 605
N+L+ I+D G+A F D +++ N VGT YM PE E L F +
Sbjct: 171 KNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSY 230
Query: 606 -KSDVYSFGVLLLEI 619
+D+YSFG++L E+
Sbjct: 231 IMADMYSFGLILWEV 245
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 418 AAATNDFSSDNKLGEGGFGSVY--KGVLQNGKEIAVKRLSR---SSGQGIEEFKTEIALI 472
A ++ + LG+G FG V K + G+E AVK +S+ E E+ L+
Sbjct: 22 AIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLL 80
Query: 473 AQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIAR 532
QL H N+ + ++ L+ E L I + S +D ++ II +
Sbjct: 81 KQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLS 137
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAA---MNPKISDFGMARIFGGDQIEENTNRVVGT 589
GI Y H++ +I+HRDLK N+LL++ N +I DFG++ F + ++ +GT
Sbjct: 138 GITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK---IGT 191
Query: 590 YGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y+APE + G + K DV+S GV+L ++ G
Sbjct: 192 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y V N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 39 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 97 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 152
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 153 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 209
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 210 SKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y V N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 89 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 145 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Query: 424 FSSDNKLGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRN 479
+++ + +GEG +G S Y V N +A+K++S Q + EI ++ + +H N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQ 539
++ I + + YL + ++ K L + I RG+ Y+H
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 162
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYA 598
+ ++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE
Sbjct: 163 AN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 599 MEGLFSTKS-DVYSFGVLLLEIILGR 623
+ TKS D++S G +L E++ R
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCIE 489
+G+G +G V++G L +G+ +AVK S Q +TEI L+H N++ + +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNILGFIASDMT 73
Query: 490 EQ----EKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD----- 540
+ + LI Y + SL +D +R L+ + A G+ +LH +
Sbjct: 74 SRNSSTQLWLITHYHEHGSL----YDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGDQIEENTNRVVGTYGYMAPEYA 598
+ I HRD K+ NVL+ + + I+D G+A + G D ++ N VGT YMAPE
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 599 MEGLFS------TKSDVYSFGVLLLEI 619
E + + +D+++FG++L EI
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y V N +A+K++S Q + EI ++ +H N++ I
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 91 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 146
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 147 ---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y V N +A+K++S Q + EI ++ +H N++ I
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 91 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 146
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 147 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQH-- 477
+DF LG+G FG V K + + A+K++ R + + + +E+ L+A L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQY 63
Query: 478 -----------RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEI 526
RN V + ++ + EY N++L I E D + + +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRD--EYWRL 121
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-------IFGGDQ- 578
I + Y+H IIHRDLK N+ +D + N KI DFG+A+ I D
Sbjct: 122 FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 579 ----IEENTNRVVGTYGYMAPEYAM-EGLFSTKSDVYSFGVLLLEII 620
+N +GT Y+A E G ++ K D+YS G++ E+I
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLVSI-- 483
+GEG +G S Y + N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIND 92
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 93 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 149 ---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y + N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 93 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 149 ---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y + N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 29 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 87 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 142
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 143 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 430 LGEGGFGSVYKGVLQN----GKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSIL 484
+GEG FG V++G+ + +A+K + + E+F E + Q H ++V ++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
G I E +I E L ++ + ++ LD + ++ + YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
+HRD+ A NVL+ A K+ DFG++R + D ++ +MAPE F+
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 605 TKSDVYSFGVLLLEIIL 621
+ SDV+ FGV + EI++
Sbjct: 191 SASDVWMFGVCMWEILM 207
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y + N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 36 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 94 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 149
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 150 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 206
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y + N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 37 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 94
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 95 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 150
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 151 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 207
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 208 SKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y + N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 28 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 85
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 86 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 141
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 142 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 198
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 199 SKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y + N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 93 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 149 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 25/208 (12%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
+G+G +G V++G Q G+ +AVK S R E TE+ L+H N++ + +
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 101
Query: 489 EEQEKM----LIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH-----Q 539
+ LI Y SL +D + + LD I+ IA G+ +LH
Sbjct: 102 TSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGT 157
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGDQIEENTNRVVGTYGYMAPEY 597
+ I HRDLK+ N+L+ I+D G+A + +Q++ N VGT YMAPE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 217
Query: 598 AMEGL----FST--KSDVYSFGVLLLEI 619
E + F + + D+++FG++L E+
Sbjct: 218 LDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 429 KLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
K+GEG G V V +GK +AVK++ Q E E+ ++ QH N+V +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ E ++ E+L +L D + ++ + + + + + LH +IH
Sbjct: 218 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 270
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGYMAPEYAMEGLFS 604
RD+K+ ++LL K+SDFG Q+ + R +VGT +MAPE +
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWMAPELISRLPYG 325
Query: 605 TKSDVYSFGVLLLEIILG 622
+ D++S G++++E++ G
Sbjct: 326 PEVDIWSLGIMVIEMVDG 343
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 429 KLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
K+GEG G V V +GK +AVK++ Q E E+ ++ QH N+V +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ E ++ E+L +L D + ++ + + + + + LH +IH
Sbjct: 98 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 150
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGYMAPEYAMEGLFS 604
RD+K+ ++LL K+SDFG Q+ + R +VGT +MAPE +
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWMAPELISRLPYG 205
Query: 605 TKSDVYSFGVLLLEIILG 622
+ D++S G++++E++ G
Sbjct: 206 PEVDIWSLGIMVIEMVDG 223
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 429 KLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
K+GEG G V V +GK +AVK++ Q E E+ ++ QH N+V +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ E ++ E+L +L D + ++ + + + + + LH +IH
Sbjct: 87 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 139
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGYMAPEYAMEGLFS 604
RD+K+ ++LL K+SDFG Q+ + R +VGT +MAPE +
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWMAPELISRLPYG 194
Query: 605 TKSDVYSFGVLLLEIILG 622
+ D++S G++++E++ G
Sbjct: 195 PEVDIWSLGIMVIEMVDG 212
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 25/208 (12%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
+G+G +G V++G Q G+ +AVK S R E TE+ L+H N++ + +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 489 EEQEK----MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH-----Q 539
+ LI Y SL +D + + LD I+ IA G+ +LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGDQIEENTNRVVGTYGYMAPEY 597
+ I HRDLK+ N+L+ I+D G+A + +Q++ N VGT YMAPE
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 598 AMEGL----FST--KSDVYSFGVLLLEI 619
E + F + + D+++FG++L E+
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y + N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 29 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 87 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 142
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 143 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 25/208 (12%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
+G+G +G V++G Q G+ +AVK S R E TE+ L+H N++ + +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 489 EEQEK----MLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH-----Q 539
+ LI Y SL +D + + LD I+ IA G+ +LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF--GGDQIEENTNRVVGTYGYMAPEY 597
+ I HRDLK+ N+L+ I+D G+A + +Q++ N VGT YMAPE
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 598 AMEGL----FST--KSDVYSFGVLLLEI 619
E + F + + D+++FG++L E+
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y + N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 93 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 149 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 205
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 429 KLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
K+GEG G V V +GK +AVK++ Q E E+ ++ QH N+V +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ E ++ E+L +L D + ++ + + + + + LH +IH
Sbjct: 91 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 143
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGYMAPEYAMEGLFS 604
RD+K+ ++LL K+SDFG Q+ + R +VGT +MAPE +
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWMAPELISRLPYG 198
Query: 605 TKSDVYSFGVLLLEIILG 622
+ D++S G++++E++ G
Sbjct: 199 PEVDIWSLGIMVIEMVDG 216
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y + N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 36 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 94 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 149
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 150 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 206
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 429 KLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
K+GEG G V V +GK +AVK++ Q E E+ ++ QH N+V +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ E ++ E+L +L D + ++ + + + + + LH +IH
Sbjct: 141 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 193
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGYMAPEYAMEGLFS 604
RD+K+ ++LL K+SDFG Q+ + R +VGT +MAPE +
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWMAPELISRLPYG 248
Query: 605 TKSDVYSFGVLLLEIILG 622
+ D++S G++++E++ G
Sbjct: 249 PEVDIWSLGIMVIEMVDG 266
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 429 KLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
K+GEG G V V +GK +AVK++ Q E E+ ++ QH N+V +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ E ++ E+L +L D + ++ + + + + + LH +IH
Sbjct: 96 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 148
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR---VVGTYGYMAPEYAMEGLFS 604
RD+K+ ++LL K+SDFG Q+ + R +VGT +MAPE +
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWMAPELISRLPYG 203
Query: 605 TKSDVYSFGVLLLEIILG 622
+ D++S G++++E++ G
Sbjct: 204 PEVDIWSLGIMVIEMVDG 221
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 40/229 (17%)
Query: 422 NDFSSDNKLGEGGFGSVYK----GVLQN--GKEIAVKRLSRSSG-QGIEEFKTEIALIAQ 474
N S LG G FG V + G++++ +AVK L S+ E +E+ +++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 475 L-QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICG---- 529
L H N+V++LG C ++I EY D+ F KR SK I
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 530 -------------IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGG 576
+A+G+ +L + IHRDL A N+LL KI DFG+AR
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR---- 216
Query: 577 DQIEENTNRVVG-----TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
I+ ++N VV +MAPE +++ +SDV+S+G+ L E+
Sbjct: 217 -HIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y + N +A+K++S Q + EI ++ + +H N++ I
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L D+Y + + D F + I RG+ Y+H +
Sbjct: 93 IIRAPTIEQMKDVYIVQDL--METDLYKLLKCQHLSNDHICYF--LYQILRGLKYIHSAN 148
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 149 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSS----GQGIEEFKTEIALIAQLQHRNLVSILG 485
LG+GGF ++ + KE+ ++ S E+ EI++ L H+++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
+ ++ E +SL + +++L + R+ + I G YLH++ R+
Sbjct: 89 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 142
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFST 605
IHRDLK N+ L+ + KI DFG+A D E + GT Y+APE + S
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEVLSKKGHSF 200
Query: 606 KSDVYSFGVLLLEIILGR 623
+ DV+S G ++ +++G+
Sbjct: 201 EVDVWSIGCIMYTLLVGK 218
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 10/196 (5%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSS-GQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+G GGF V + G+ +A+K + +++ G + KTEI + L+H+++ +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
+ ++ EY P L YI + + S + F I + Y+H H
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR---QIVSAVAYVHSQG---YAH 131
Query: 548 RDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM-EGLFSTK 606
RDLK N+L D K+ DFG+ G++ + + G+ Y APE + ++
Sbjct: 132 RDLKPENLLFDEYHKLKLIDFGLCAKPKGNK-DYHLQTCCGSLAYAAPELIQGKSYLGSE 190
Query: 607 SDVYSFGVLLLEIILG 622
+DV+S G+LL ++ G
Sbjct: 191 ADVWSMGILLYVLMCG 206
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 40/229 (17%)
Query: 422 NDFSSDNKLGEGGFGSVYK----GVLQN--GKEIAVKRLSRSSG-QGIEEFKTEIALIAQ 474
N S LG G FG V + G++++ +AVK L S+ E +E+ +++
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 475 L-QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICG---- 529
L H N+V++LG C ++I EY D+ F KR SK I
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIMEDDEL 140
Query: 530 -------------IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGG 576
+A+G+ +L + IHRDL A N+LL KI DFG+AR
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR---- 193
Query: 577 DQIEENTNRVVG-----TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
I+ ++N VV +MAPE +++ +SDV+S+G+ L E+
Sbjct: 194 -DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSS----GQGIEEFKTEIALIAQLQHRNLVSILG 485
LG+GGF ++ + KE+ ++ S E+ EI++ L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
+ ++ E +SL + +++L + R+ + I G YLH++ R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 138
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFST 605
IHRDLK N+ L+ + KI DFG+A D E + GT Y+APE + S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 606 KSDVYSFGVLLLEIILGR 623
+ DV+S G ++ +++G+
Sbjct: 197 EVDVWSIGCIMYTLLVGK 214
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSI-- 483
+GEG +G S Y + N +A++++S Q + EI ++ + +H N++ I
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 484 --LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
IE+ + + I + L ++ ++ K L + I RG+ Y+H +
Sbjct: 93 IIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN-TNRVVGTYGYMAPEYAME 600
++HRDLK SN+LL+ + KI DFG+AR+ D V T Y APE +
Sbjct: 149 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 601 GLFSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSS----GQGIEEFKTEIALIAQLQHRNLVSILG 485
LG+GGF ++ + KE+ ++ S E+ EI++ L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
+ ++ E +SL + +++L + R+ + I G YLH++ R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 138
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFST 605
IHRDLK N+ L+ + KI DFG+A D E + GT Y+APE + S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 606 KSDVYSFGVLLLEIILGR 623
+ DV+S G ++ +++G+
Sbjct: 197 EVDVWSIGCIMYTLLVGK 214
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 23/229 (10%)
Query: 412 FDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQNG--KEIAVKRLSRSSGQGIEEFKTEI 469
D SN A ++ F +++LG G VY+ Q G K A+K L ++ + I +TEI
Sbjct: 43 IDGSNRDALSDFFEVESELGRGATSIVYR-CKQKGTQKPYALKVLKKTVDKKI--VRTEI 99
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICG 529
++ +L H N++ + E L+ E + L I ++ S D + + +
Sbjct: 100 GVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA---DAVKQ 156
Query: 530 IARGILYLHQDSRLRIIHRDLKASNVLL-----DAAMNPKISDFGMARIFGGDQIEENTN 584
I + YLH++ I+HRDLK N+L DA + KI+DFG+++I + +
Sbjct: 157 ILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPL--KIADFGLSKIVEHQVLMKT-- 209
Query: 585 RVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQG 633
V GT GY APE + + D++S G++ ++ G F+ E+G
Sbjct: 210 -VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG--FEPFYDERG 255
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 40/229 (17%)
Query: 422 NDFSSDNKLGEGGFGSVYK----GVLQN--GKEIAVKRLSRSSG-QGIEEFKTEIALIAQ 474
N S LG G FG V + G++++ +AVK L S+ E +E+ +++
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 475 L-QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICG---- 529
L H N+V++LG C ++I EY D+ F KR SK I
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIMEDDEL 156
Query: 530 -------------IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGG 576
+A+G+ +L + IHRDL A N+LL KI DFG+AR
Sbjct: 157 ALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR---- 209
Query: 577 DQIEENTNRVVG-----TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
I+ ++N VV +MAPE +++ +SDV+S+G+ L E+
Sbjct: 210 -DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 257
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 112/234 (47%), Gaps = 41/234 (17%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNG------KEIAVKRLSRSSG---------------- 459
N ++ +++G+G +G V +N K ++ K+L R +G
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 460 -----QGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEY-LPNKSLDVYIFDEA 513
IE+ EIA++ +L H N+V ++ + E L + L N+ + +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--PT 130
Query: 514 KRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARI 573
+ L + RF + +GI YLH +IIHRD+K SN+L+ + KI+DFG++
Sbjct: 131 LKPLSEDQARF-YFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 574 F-GGDQIEENTNRVVGTYGYMAPEYAME--GLFSTKS-DVYSFGVLLLEIILGR 623
F G D + NT VGT +MAPE E +FS K+ DV++ GV L + G+
Sbjct: 187 FKGSDALLSNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 430 LGEGGFGSVYKGVLQN----GKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSIL 484
+GEG FG V++G+ + +A+K + + E+F E + Q H ++V ++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
G I E +I E L ++ + ++ LD + ++ + YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
+HRD+ A NVL+ + K+ DFG++R + D ++ +MAPE F+
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 605 TKSDVYSFGVLLLEIIL 621
+ SDV+ FGV + EI++
Sbjct: 191 SASDVWMFGVCMWEILM 207
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 416 NIAAATNDFSSDNKLGEGGFGSVY------KGVLQNGKEIAVKRLSRSSGQGIEEFKTEI 469
NI NDFS +G GGFG VY G + K + KR+ G+ + + +
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 241
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKM-LIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---E 525
+ + + +K+ I + + L ++ S D RF E
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM--RFYAAE 299
Query: 526 IICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR 585
II G+ H +R +++RDLK +N+LLD + +ISD G+A F ++ +
Sbjct: 300 IILGLE------HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFS----KKKPHA 348
Query: 586 VVGTYGYMAPEYAMEGL-FSTKSDVYSFGVLLLEIILG 622
VGT+GYMAPE +G+ + + +D +S G +L +++ G
Sbjct: 349 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSS----GQGIEEFKTEIALIAQLQHRNLVSILG 485
LG+GGF ++ + KE+ ++ S E+ EI++ L H+++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
+ ++ E +SL + +++L + R+ + I G YLH++ R+
Sbjct: 109 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 162
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFST 605
IHRDLK N+ L+ + KI DFG+A D E + GT Y+APE + S
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 606 KSDVYSFGVLLLEIILGR 623
+ DV+S G ++ +++G+
Sbjct: 221 EVDVWSIGCIMYTLLVGK 238
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 416 NIAAATNDFSSDNKLGEGGFGSVY------KGVLQNGKEIAVKRLSRSSGQGIEEFKTEI 469
NI NDFS +G GGFG VY G + K + KR+ G+ + + +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKM-LIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---E 525
+ + + +K+ I + + L ++ S D RF E
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM--RFYAAE 300
Query: 526 IICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR 585
II G+ H +R +++RDLK +N+LLD + +ISD G+A F ++ +
Sbjct: 301 IILGLE------HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFS----KKKPHA 349
Query: 586 VVGTYGYMAPEYAMEGL-FSTKSDVYSFGVLLLEIILG 622
VGT+GYMAPE +G+ + + +D +S G +L +++ G
Sbjct: 350 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSS----GQGIEEFKTEIALIAQLQHRNLVSILG 485
LG+GGF ++ + KE+ ++ S E+ EI++ L H+++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
+ ++ E +SL + +++L + R+ + I G YLH++ R+
Sbjct: 107 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 160
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFST 605
IHRDLK N+ L+ + KI DFG+A D E + GT Y+APE + S
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSF 218
Query: 606 KSDVYSFGVLLLEIILGR 623
+ DV+S G ++ +++G+
Sbjct: 219 EVDVWSIGCIMYTLLVGK 236
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 110/241 (45%), Gaps = 29/241 (12%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLS--RSSGQGIEEFKTEIALIAQLQH 477
++++ +LG+G F V + V + G E A K ++ + S + ++ + E + +LQH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 478 RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYL 537
N+V + EE L+++ + L D R + I I I Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMN---PKISDFGMARIFGGDQIEENTNRV----VGTY 590
H + I+HR+LK N+LL + K++DFG+A IE N + GT
Sbjct: 121 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-------IEVNDSEAWHGFAGTP 170
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG------RRNNTFHLEQGSGSWNLVGHVW 644
GY++PE + +S D+++ GV+L +++G + + + +G+++ W
Sbjct: 171 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW 230
Query: 645 D 645
D
Sbjct: 231 D 231
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 416 NIAAATNDFSSDNKLGEGGFGSVY------KGVLQNGKEIAVKRLSRSSGQGIEEFKTEI 469
NI NDFS +G GGFG VY G + K + KR+ G+ + + +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKM-LIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---E 525
+ + + +K+ I + + L ++ S D RF E
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM--RFYAAE 300
Query: 526 IICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR 585
II G+ H +R +++RDLK +N+LLD + +ISD G+A F ++ +
Sbjct: 301 IILGLE------HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFS----KKKPHA 349
Query: 586 VVGTYGYMAPEYAMEGL-FSTKSDVYSFGVLLLEIILG 622
VGT+GYMAPE +G+ + + +D +S G +L +++ G
Sbjct: 350 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 416 NIAAATNDFSSDNKLGEGGFGSVY------KGVLQNGKEIAVKRLSRSSGQGIEEFKTEI 469
NI NDFS +G GGFG VY G + K + KR+ G+ + + +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKM-LIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---E 525
+ + + +K+ I + + L ++ S D RF E
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM--RFYAAE 300
Query: 526 IICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNR 585
II G+ H +R +++RDLK +N+LLD + +ISD G+A F ++ +
Sbjct: 301 IILGLE------HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFS----KKKPHA 349
Query: 586 VVGTYGYMAPEYAMEGL-FSTKSDVYSFGVLLLEIILG 622
VGT+GYMAPE +G+ + + +D +S G +L +++ G
Sbjct: 350 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 43/230 (18%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y +L+ + +A+K+LSR + E+ L+ + H+N++ +L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 485 GCCIEEQEKMLIYEYLPNKSL----DVYI--------FDEAKRSLLDWSKRFEIICGIAR 532
+ P KSL DVYI + + LD + ++ +
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
GI +LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM--MTPYVVTRY-Y 191
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG--RRNNTFHLEQGSGSWNLV 640
APE + + D++S GV++ E+I G T H++Q WN V
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQ----WNKV 237
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 33/227 (14%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQH-- 477
+DF LG+G FG V K + + A+K++ R + + + +E+ L+A L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQY 63
Query: 478 -----------RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEI 526
RN V + ++ + EY N +L I E D + + +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD--EYWRL 121
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-------IFGGDQ- 578
I + Y+H IIHRDLK N+ +D + N KI DFG+A+ I D
Sbjct: 122 FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 579 ----IEENTNRVVGTYGYMAPEYA-MEGLFSTKSDVYSFGVLLLEII 620
+N +GT Y+A E G ++ K D+YS G++ E+I
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 40/229 (17%)
Query: 422 NDFSSDNKLGEGGFGSVYK----GVLQN--GKEIAVKRLSRSSG-QGIEEFKTEIALIAQ 474
N S LG G FG V + G++++ +AVK L S+ E +E+ +++
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 475 L-QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICG---- 529
L H N+V++LG C ++I EY D+ F KR SK I
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIMEDDEL 158
Query: 530 -------------IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGG 576
+A+G+ +L + IHRDL A N+LL KI DFG+AR
Sbjct: 159 ALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR---- 211
Query: 577 DQIEENTNRVVG-----TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
I+ ++N VV +MAPE +++ +SDV+S+G+ L E+
Sbjct: 212 -DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 259
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 424 FSSDNKLGEGGFGSVY-KGVLQNGKEIAVKRLSRSSGQ-GIEEFKTEIALIAQLQHRNLV 481
F KLG G FG V+ +G E +K +++ Q +E+ + EI ++ L H N++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 482 SILGCCIEEQEKMLIYEYLP-NKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
I + ++ E + L+ + +A+ L E++ + + Y H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 541 SRLRIIHRDLKASNVLLD--AAMNP-KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEY 597
++H+DLK N+L + +P KI DFG+A +F D E++ GT YMAPE
Sbjct: 144 ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD---EHSTNAAGTALYMAPEV 197
Query: 598 AMEGLFSTKSDVYSFGVLLLEIILG 622
+ + K D++S GV++ ++ G
Sbjct: 198 FKRDV-TFKCDIWSAGVVMYFLLTG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 43/230 (18%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y +L+ + +A+K+LSR + E+ L+ + H+N++ +L
Sbjct: 32 IGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 485 GCCIEEQEKMLIYEYLPNKSL----DVYI--------FDEAKRSLLDWSKRFEIICGIAR 532
+ P KSL DVYI + + LD + ++ +
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
GI +LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM--MTPYVVTRY-Y 191
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG--RRNNTFHLEQGSGSWNLV 640
APE + + D++S GV++ E+I G T H++Q WN V
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQ----WNKV 237
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 110/241 (45%), Gaps = 29/241 (12%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLS--RSSGQGIEEFKTEIALIAQLQH 477
++++ +LG+G F V + V + G E A K ++ + S + ++ + E + +LQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 478 RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYL 537
N+V + EE L+++ + L D R + I I I Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMN---PKISDFGMARIFGGDQIEENTNRV----VGTY 590
H + I+HR+LK N+LL + K++DFG+A IE N + GT
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-------IEVNDSEAWHGFAGTP 171
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG------RRNNTFHLEQGSGSWNLVGHVW 644
GY++PE + +S D+++ GV+L +++G + + + +G+++ W
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW 231
Query: 645 D 645
D
Sbjct: 232 D 232
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 40/229 (17%)
Query: 422 NDFSSDNKLGEGGFGSVYK----GVLQN--GKEIAVKRLSRSSG-QGIEEFKTEIALIAQ 474
N S LG G FG V + G++++ +AVK L S+ E +E+ +++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 475 L-QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICG---- 529
L H N+V++LG C ++I EY D+ F KR SK I
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 530 -------------IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGG 576
+A+G+ +L + IHRDL A N+LL KI DFG+AR
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR---- 216
Query: 577 DQIEENTNRVVG-----TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
I+ ++N VV +MAPE +++ +SDV+S+G+ L E+
Sbjct: 217 -DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 110/241 (45%), Gaps = 29/241 (12%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLS--RSSGQGIEEFKTEIALIAQLQH 477
++++ +LG+G F V + V + G E A K ++ + S + ++ + E + +LQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 478 RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYL 537
N+V + EE L+++ + L D R + I I I Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMN---PKISDFGMARIFGGDQIEENTNRV----VGTY 590
H + I+HR+LK N+LL + K++DFG+A IE N + GT
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-------IEVNDSEAWHGFAGTP 171
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG------RRNNTFHLEQGSGSWNLVGHVW 644
GY++PE + +S D+++ GV+L +++G + + + +G+++ W
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW 231
Query: 645 D 645
D
Sbjct: 232 D 232
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 424 FSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEE-FKTEIALIAQLQHRNLV 481
F LG G F V + GK AVK + + + +G E + EIA++ +++H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
++ L+ + + L I ++ + D S +I + + YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST---LIRQVLDAVYYLH--- 137
Query: 542 RLRIIHRDLKASNVLL---DAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
R+ I+HRDLK N+L D ISDFG++++ G + + GT GY+APE
Sbjct: 138 RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV---MSTACGTPGYVAPEVL 194
Query: 599 MEGLFSTKSDVYSFGVLLLEIILG 622
+ +S D +S GV+ ++ G
Sbjct: 195 AQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKE----IAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSIL 484
+GEG FG V++G+ + + +A+K + + E+F E + Q H ++V ++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
G I E +I E L ++ + ++ LD + ++ + YL R
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
+HRD+ A NVL+ A K+ DFG++R + D ++ +MAPE F+
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 605 TKSDVYSFGVLLLEIIL 621
+ SDV+ FGV + EI++
Sbjct: 571 SASDVWMFGVCMWEILM 587
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 85/174 (48%), Gaps = 29/174 (16%)
Query: 530 IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-IFGG-DQIEENTNRVV 587
+ARG+ +L S + IHRDL A N+LL KI DFG+AR I+ D + + R+
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL- 263
Query: 588 GTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLVGHVWDL- 646
+MAPE + ++STKSDV+S+GVLL EI F L G + V D
Sbjct: 264 -PLKWMAPESIFDKIYSTKSDVWSYGVLLWEI--------FSL--GGSPYPGVQMDEDFC 312
Query: 647 --WKEGTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLG 698
+EG M A + S PEI + + L C +RP + +V LG
Sbjct: 313 SRLREGMRMRAPEYS------TPEIYQIM---LDCWHRDPKERPRFAELVEKLG 357
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 395 DAAELDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSVYK----GVLQNG--KE 448
D LD+ E LP +D S A LG G FG V + G+ ++ +
Sbjct: 4 DEVPLDE---QCERLP-YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRT 59
Query: 449 IAVKRLSRSSGQGIEEFK---TEIALIAQL-QHRNLVSILGCCIEEQEK-MLIYEYLPNK 503
+AVK L G E+K TE+ ++ + H N+V++LG C ++ M+I EY
Sbjct: 60 VAVKMLK--EGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYG 117
Query: 504 SLDVYIFDEAKRSLL 518
+L Y+ ++KR L
Sbjct: 118 NLSNYL--KSKRDLF 130
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 110/241 (45%), Gaps = 29/241 (12%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLS--RSSGQGIEEFKTEIALIAQLQH 477
++++ +LG+G F V + V + G E A K ++ + S + ++ + E + +LQH
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 478 RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYL 537
N+V + EE L+++ + L D R + I I I Y
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 144
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMN---PKISDFGMARIFGGDQIEENTNRV----VGTY 590
H + I+HR+LK N+LL + K++DFG+A IE N + GT
Sbjct: 145 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-------IEVNDSEAWHGFAGTP 194
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG------RRNNTFHLEQGSGSWNLVGHVW 644
GY++PE + +S D+++ GV+L +++G + + + +G+++ W
Sbjct: 195 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW 254
Query: 645 D 645
D
Sbjct: 255 D 255
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 29/243 (11%)
Query: 410 PVFDLSNIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQGIEEFKT- 467
PVFD N + F +G+G FG V + K++ A+K +++ E +
Sbjct: 4 PVFD-ENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNV 62
Query: 468 --EIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI-----FDEAKRSLLDW 520
E+ ++ L+H LV++ +E++ ++ + L L ++ F E L
Sbjct: 63 FKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF-- 120
Query: 521 SKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIE 580
IC + + YL RIIHRD+K N+LLD + I+DF +A + E
Sbjct: 121 ------ICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR---E 168
Query: 581 ENTNRVVGTYGYMAPEY--AMEGL-FSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSW 637
+ GT YMAPE + +G +S D +S GV E++ GRR +H+ + S
Sbjct: 169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR--PYHIRSSTSSK 226
Query: 638 NLV 640
+V
Sbjct: 227 EIV 229
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 430 LGEGGFGSVYKGVLQN----GKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSIL 484
+GEG FG V++G+ + +A+K + + E+F E + Q H ++V ++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
G I E +I E L ++ + ++ LD + ++ + YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
+HRD+ A NVL+ + K+ DFG++R + D ++ +MAPE F+
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 605 TKSDVYSFGVLLLEIIL 621
+ SDV+ FGV + EI++
Sbjct: 191 SASDVWMFGVCMWEILM 207
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKE----IAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSIL 484
+GEG FG V++G+ + + +A+K + + E+F E + Q H ++V ++
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
G I E +I E L ++ + ++ LD + ++ + YL R
Sbjct: 106 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 159
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
+HRD+ A NVL+ + K+ DFG++R + D ++ +MAPE F+
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 605 TKSDVYSFGVLLLEIIL 621
+ SDV+ FGV + EI++
Sbjct: 219 SASDVWMFGVCMWEILM 235
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKE----IAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSIL 484
+GEG FG V++G+ + + +A+K + + E+F E + Q H ++V ++
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
G I E +I E L ++ + ++ LD + ++ + YL R
Sbjct: 83 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 136
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
+HRD+ A NVL+ + K+ DFG++R + D ++ +MAPE F+
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 605 TKSDVYSFGVLLLEIIL 621
+ SDV+ FGV + EI++
Sbjct: 196 SASDVWMFGVCMWEILM 212
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 424 FSSDNKLGEGGFGSVYKGVLQNGKEI--AVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
++ +N +G G +G V K +Q G I A K++ + + ++ FK EI ++ L H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+ + + L+ E L + + + S I+ + + Y H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERV---VHKRVFRESDAARIMKDVLSAVAYCH--- 123
Query: 542 RLRIIHRDLKASNVLL--DAAMNP-KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+L + HRDLK N L D+ +P K+ DFG+A F ++ VGT Y++P+
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQ-V 179
Query: 599 MEGLFSTKSDVYSFGVLLLEIILG 622
+EGL+ + D +S GV++ ++ G
Sbjct: 180 LEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSS----GQGIEEFKTEIALIAQLQHRNLVSILG 485
LG+GGF ++ + KE+ ++ S E+ EI++ L H+++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
+ ++ E +SL + +++L + R+ + I G YLH++ R+
Sbjct: 83 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 136
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFST 605
IHRDLK N+ L+ + KI DFG+A D E + GT Y+APE + S
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSF 194
Query: 606 KSDVYSFGVLLLEIILGR 623
+ DV+S G ++ +++G+
Sbjct: 195 EVDVWSIGCIMYTLLVGK 212
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 12/195 (6%)
Query: 429 KLGEGGFGSVYKGVLQNGKEI-AVKRLS-RSSGQGIEEFKT-EIALIAQLQHRNLVSILG 485
K+GEG +G+V+K + EI A+KR+ +G+ EI L+ +L+H+N+V +
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
+++ L++E+ ++ L Y FD L D + + +G+ + H + +
Sbjct: 69 VLHSDKKLTLVFEFC-DQDLKKY-FDSCNGDL-DPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM-EGLFS 604
+HRDLK N+L++ K++DFG+AR FG + + VV T Y P+ L+S
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 605 TKSDVYSFGVLLLEI 619
T D++S G + E+
Sbjct: 181 TSIDMWSAGCIFAEL 195
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKE----IAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSIL 484
+GEG FG V++G+ + + +A+K + + E+F E + Q H ++V ++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
G I E +I E L ++ + ++ LD + ++ + YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
+HRD+ A NVL+ + K+ DFG++R + D ++ +MAPE F+
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 605 TKSDVYSFGVLLLEIIL 621
+ SDV+ FGV + EI++
Sbjct: 191 SASDVWMFGVCMWEILM 207
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 424 FSSDNKLGEGGFGSVYKGVLQNGKEI--AVKRLSRSSGQGIEEFKTEIALIAQLQHRNLV 481
++ +N +G G +G V K +Q G I A K++ + + ++ FK EI ++ L H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+ + + L+ E L + + + S I+ + + Y H
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERV---VHKRVFRESDAARIMKDVLSAVAYCH--- 140
Query: 542 RLRIIHRDLKASNVLL--DAAMNP-KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
+L + HRDLK N L D+ +P K+ DFG+A F ++ VGT Y++P+
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQ-V 196
Query: 599 MEGLFSTKSDVYSFGVLLLEIILG 622
+EGL+ + D +S GV++ ++ G
Sbjct: 197 LEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKE----IAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSIL 484
+GEG FG V++G+ + + +A+K + + E+F E + Q H ++V ++
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
G I E +I E L ++ + ++ LD + ++ + YL R
Sbjct: 81 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 134
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
+HRD+ A NVL+ + K+ DFG++R + D ++ +MAPE F+
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 605 TKSDVYSFGVLLLEIIL 621
+ SDV+ FGV + EI++
Sbjct: 194 SASDVWMFGVCMWEILM 210
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Query: 430 LGEGGFG---SVYKGVLQNGKEIAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSILG 485
+GEG +G S Y V + +A+K++S Q + EI ++ + +H N++ I
Sbjct: 51 IGEGAYGMVSSAYDHVRKT--RVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
+ + Y+ ++ ++ K L + I RG+ Y+H + +
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN---V 165
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENT---NRVVGTYGYMAPEYAMEGL 602
+HRDLK SN+L++ + KI DFG+ARI D ++T V T Y APE +
Sbjct: 166 LHRDLKPSNLLINTTCDLKICDFGLARI--ADPEHDHTGFLTEXVATRWYRAPEIMLNSK 223
Query: 603 FSTKS-DVYSFGVLLLEIILGR 623
TKS D++S G +L E++ R
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNR 245
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 20/237 (8%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLS--RSSGQGIEEFKTEIALIAQLQH 477
T+++ +G+G F V + V L G E A K ++ + S + ++ + E + L+H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 478 RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYL 537
N+V + EE L+++ + L D R + I I +L+
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHC 119
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMN---PKISDFGMARIFGGDQIEENTNRVVGTYGYMA 594
HQ + ++HRDLK N+LL + K++DFG+A GDQ + GT GY++
Sbjct: 120 HQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ--QAWFGFAGTPGYLS 174
Query: 595 PEYAMEGLFSTKSDVYSFGVLLLEIILG------RRNNTFHLEQGSGSWNLVGHVWD 645
PE + + D+++ GV+L +++G + + + +G+++ WD
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWD 231
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 115/239 (48%), Gaps = 30/239 (12%)
Query: 429 KLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFK-TEIALIAQLQHRNLVSILGCC 487
K+G G +G VYK ++GK+ L + G GI EIAL+ +L+H N++S+
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 488 IEEQEKM--LIYEYLPNKSLDVYIFDEAKRS-----LLDWSKRFEIICGIARGILYLHQD 540
+ ++ L+++Y + + F A ++ L ++ I GI YLH +
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 541 SRLRIIHRDLKASNVLLDAAMNP-----KISDFGMARIFGGD-QIEENTNRVVGTYGYMA 594
++HRDLK +N+L+ P KI+D G AR+F + + + VV T+ Y A
Sbjct: 148 W---VLHRDLKPANILV-MGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA 203
Query: 595 PEYAMEGLFSTKS-DVYSFGVLLLEIILG-----------RRNNTFHLEQGSGSWNLVG 641
PE + TK+ D+++ G + E++ + +N +H +Q +N++G
Sbjct: 204 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 262
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKE----IAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSIL 484
+GEG FG V++G+ + + +A+K + + E+F E + Q H ++V ++
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
G I E +I E L ++ + ++ LD + ++ + YL R
Sbjct: 80 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 133
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
+HRD+ A NVL+ + K+ DFG++R + D ++ +MAPE F+
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 605 TKSDVYSFGVLLLEIIL 621
+ SDV+ FGV + EI++
Sbjct: 193 SASDVWMFGVCMWEILM 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKE----IAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSIL 484
+GEG FG V++G+ + + +A+K + + E+F E + Q H ++V ++
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
G I E +I E L ++ + ++ LD + ++ + YL R
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 128
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
+HRD+ A NVL+ + K+ DFG++R + D ++ +MAPE F+
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 605 TKSDVYSFGVLLLEIIL 621
+ SDV+ FGV + EI++
Sbjct: 188 SASDVWMFGVCMWEILM 204
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 19/215 (8%)
Query: 420 ATNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHR 478
D ++G G +GSV K V + +G+ +AVKR+ RS+ E+ + + L ++
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI-RSTVDEKEQKQLLMDLDVVMRSS 78
Query: 479 N---LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
+ +V G E + + E + + S D F + S+LD EI+ I +
Sbjct: 79 DCPYIVQFYGALFREGDCWICMELM-STSFDK--FYKYVYSVLDDVIPEEILGKITLATV 135
Query: 536 YL--HQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEE-NTNRVVGTYGY 592
H L+IIHRD+K SN+LLD + N K+ DFG++ G ++ R G Y
Sbjct: 136 KALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS----GQLVDSIAKTRDAGCRPY 191
Query: 593 MAPEY----AMEGLFSTKSDVYSFGVLLLEIILGR 623
MAPE A + +SDV+S G+ L E+ GR
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 138/333 (41%), Gaps = 39/333 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRS---SGQGIEEFKTEIALIAQLQH 477
DF+ LG+G FG V + +E+ A+K L + +E E ++A L
Sbjct: 19 TDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDK 78
Query: 478 RNLVSILGCCIEEQEKM-LIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
++ L C + +++ + EY+ L +I K + I+ G+ +
Sbjct: 79 PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK---FKEPQAVFYAAEISIGLFF 135
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPE 596
LH+ II+RDLK NV+LD+ + KI+DFGM + D + T GT Y+APE
Sbjct: 136 LHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV--TTREFCGTPDYIAPE 190
Query: 597 YAMEGLFSTKSDVYSFGVLLLEIILGRR----NNTFHLEQGSGSWNLVGHVWDLWKE--- 649
+ D +++GVLL E++ G+ + L Q N V + L KE
Sbjct: 191 IIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN-VSYPKSLSKEAVS 249
Query: 650 ---GTAMEAVDKSLGESCCAPEILRCIHLGLLCVQEQATDRPNMSAVVSMLGSDNAPSSP 706
G + K LG C PE G V+E A R + + P
Sbjct: 250 ICKGLMTKHPAKRLG---CGPE-------GERDVREHAFFR----RIDWEKLENREIQPP 295
Query: 707 KHPAFIAKGLSNVDEFWT-GEGVTTSVNDLTIT 738
P KG N D+F+T G+ V + L I
Sbjct: 296 FKPKVCGKGAENFDKFFTRGQPVLXPPDQLVIA 328
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 22/211 (10%)
Query: 424 FSSDNKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQ 476
+ + +LG G F V K LQ + KR ++SS +G+ E+ + E++++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H N++++ + + +LI E + L ++ A++ L + E + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYY 129
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPK----ISDFGMA-RIFGGDQIEENTNRVVGTYG 591
LH L+I H DLK N++L PK I DFG+A +I G++ + + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPA 182
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
++APE ++D++S GV+ ++ G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 22/211 (10%)
Query: 424 FSSDNKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQ 476
+ + +LG G F V K LQ + KR ++SS +G+ E+ + E++++ ++Q
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H N++++ + + +LI E + L ++ A++ L + E + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYY 129
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPK----ISDFGMA-RIFGGDQIEENTNRVVGTYG 591
LH L+I H DLK N++L PK I DFG+A +I G++ + + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPE 182
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
++APE ++D++S GV+ ++ G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 22/211 (10%)
Query: 424 FSSDNKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQ 476
+ + +LG G F V K LQ + KR ++SS +G+ E+ + E++++ ++Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H N++++ + + +LI E + L ++ A++ L + E + I G+ Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYY 128
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPK----ISDFGMA-RIFGGDQIEENTNRVVGTYG 591
LH L+I H DLK N++L PK I DFG+A +I G++ + + GT
Sbjct: 129 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPE 181
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
++APE ++D++S GV+ ++ G
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 22/211 (10%)
Query: 424 FSSDNKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQ 476
+ + +LG G F V K LQ + KR ++SS +G+ E+ + E++++ ++Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H N++++ + + +LI E + L ++ A++ L + E + I G+ Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYY 128
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPK----ISDFGMA-RIFGGDQIEENTNRVVGTYG 591
LH L+I H DLK N++L PK I DFG+A +I G++ + + GT
Sbjct: 129 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPE 181
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
++APE ++D++S GV+ ++ G
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSS--GQGIE-EFKTEIALIAQLQH 477
+DF LG+G FG+VY + K I A+K L +S +G+E + + EI + + L+H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 478 RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYL 537
N++ + + + L+ E+ P L + K D + + +A + Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYC 130
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEY 597
H+ ++IHRD+K N+L+ KI+DFG + + GT Y+ PE
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEM 183
Query: 598 AMEGLFSTKSDVYSFGVLLLEIILG 622
K D++ GVL E ++G
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 22/211 (10%)
Query: 424 FSSDNKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQ 476
+ + +LG G F V K LQ + KR ++SS +G+ E+ + E++++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H N++++ + + +LI E + L ++ A++ L + E + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYY 129
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPK----ISDFGMA-RIFGGDQIEENTNRVVGTYG 591
LH L+I H DLK N++L PK I DFG+A +I G++ + + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPE 182
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
++APE ++D++S GV+ ++ G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSS--GQGIE-EFKTEIALIAQLQH 477
+DF LG+G FG+VY + K I A+K L +S +G+E + + EI + + L+H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 478 RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYL 537
N++ + + + L+ E+ P L + K D + + +A + Y
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYC 131
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEY 597
H+ ++IHRD+K N+L+ KI+DFG + + GT Y+ PE
Sbjct: 132 HER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEM 184
Query: 598 AMEGLFSTKSDVYSFGVLLLEIILG 622
K D++ GVL E ++G
Sbjct: 185 IEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 428 NKLGEGGFGSVY---KGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSIL 484
KLG G +G V V + I + R + S + E+A++ L H N++ +
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
+++ L+ E L I K + +D + II + G+ YLH+ +
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVLSGVTYLHKHN--- 156
Query: 545 IIHRDLKASNVLLDAAMNP---KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
I+HRDLK N+LL++ KI DFG++ +F + ++ +GT Y+APE +
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGTAYYIAPE-VLRK 212
Query: 602 LFSTKSDVYSFGVLLLEIILG 622
+ K DV+S GV+L ++ G
Sbjct: 213 KYDEKCDVWSIGVILFILLAG 233
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEI----AVKRLSRSSGQGIEEFKTEIALIAQL-Q 476
DF +G G + V L+ I VK+ + + I+ +TE + Q
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H LV + C E + EY+ L ++ + +R L + RF I+ + Y
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARF-YSAEISLALNY 125
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPE 596
LH+ II+RDLK NVLLD+ + K++D+GM + G + + T+ GT Y+APE
Sbjct: 126 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPE 180
Query: 597 YAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ D ++ GVL+ E++ GR
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 430 LGEGGFGSVYKGVLQ-NGKEIA---VKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILG 485
LG GGFG V+ ++ GK A + + +G + E ++A++ R +VS+
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIF--DEAKRSLLDWSKRFEIICGIARGILYLHQDSRL 543
+ + L+ + + +I+ DE + F I G+ +LHQ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF-YTAQIVSGLEHLHQRN-- 309
Query: 544 RIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLF 603
II+RDLK NVLLD N +ISD G+A Q + T GT G+MAPE + +
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEY 366
Query: 604 STKSDVYSFGVLLLEIILGR 623
D ++ GV L E+I R
Sbjct: 367 DFSVDYFALGVTLYEMIAAR 386
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 22/211 (10%)
Query: 424 FSSDNKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQ 476
+ + +LG G F V K LQ + KR ++SS +G+ E+ + E++++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H N++++ + + +LI E + L ++ A++ L + E + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYY 129
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPK----ISDFGMA-RIFGGDQIEENTNRVVGTYG 591
LH L+I H DLK N++L PK I DFG+A +I G++ + + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPE 182
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
++APE ++D++S GV+ ++ G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 12/200 (6%)
Query: 430 LGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQ---GIEEFKTEIALIAQLQHRNLVSILG 485
LG GGFG V+ ++ GK A K+L++ + G + E ++A++ R +VS+
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIF--DEAKRSLLDWSKRFEIICGIARGILYLHQDSRL 543
+ + L+ + + +I+ DE + F I G+ +LHQ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF-YTAQIVSGLEHLHQRN-- 309
Query: 544 RIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLF 603
II+RDLK NVLLD N +ISD G+A Q + T GT G+MAPE + +
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEY 366
Query: 604 STKSDVYSFGVLLLEIILGR 623
D ++ GV L E+I R
Sbjct: 367 DFSVDYFALGVTLYEMIAAR 386
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSR----SSGQGIEEFKTEIALIAQL-Q 476
DF +G G + V L+ I R+ + + + I+ +TE + Q
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H LV + C E + EY+ L ++ + +R L + RF I+ + Y
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARF-YSAEISLALNY 168
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPE 596
LH+ II+RDLK NVLLD+ + K++D+GM + G + + T+ GT Y+APE
Sbjct: 169 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPE 223
Query: 597 YAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ D ++ GVL+ E++ GR
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEI----AVKRLSRSSGQGIEEFKTEIALIAQL-Q 476
DF +G G + V L+ I VK+ + + I+ +TE + Q
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H LV + C E + EY+ L ++ + +R L + RF I+ + Y
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARF-YSAEISLALNY 121
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPE 596
LH+ II+RDLK NVLLD+ + K++D+GM + G + + T+ GT Y+APE
Sbjct: 122 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPE 176
Query: 597 YAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ D ++ GVL+ E++ GR
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 430 LGEGGFGSVYKGVLQ-NGKEIA---VKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILG 485
LG GGFG V+ ++ GK A + + +G + E ++A++ R +VS+
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIF--DEAKRSLLDWSKRFEIICGIARGILYLHQDSRL 543
+ + L+ + + +I+ DE + F I G+ +LHQ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF-YTAQIVSGLEHLHQRN-- 309
Query: 544 RIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLF 603
II+RDLK NVLLD N +ISD G+A Q + T GT G+MAPE + +
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEY 366
Query: 604 STKSDVYSFGVLLLEIILGR 623
D ++ GV L E+I R
Sbjct: 367 DFSVDYFALGVTLYEMIAAR 386
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 424 FSSDNKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQ 476
+ + +LG G F V K LQ + KR ++SS +G+ E+ + E++++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H N++++ + + +LI E + L ++ A++ L + E + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYY 129
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPK----ISDFGMA-RIFGGDQIEENTNRVVGTYG 591
LH L+I H DLK N++L PK I DFG+A +I G++ + + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPE 182
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVL 615
++APE ++D++S GV+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 430 LGEGGFGSVYKGVLQ-NGKEIA---VKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILG 485
LG GGFG V+ ++ GK A + + +G + E ++A++ R +VS+
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIF--DEAKRSLLDWSKRFEIICGIARGILYLHQDSRL 543
+ + L+ + + +I+ DE + F I G+ +LHQ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF-YTAQIVSGLEHLHQRN-- 309
Query: 544 RIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLF 603
II+RDLK NVLLD N +ISD G+A Q + T GT G+MAPE + +
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEY 366
Query: 604 STKSDVYSFGVLLLEIILGR 623
D ++ GV L E+I R
Sbjct: 367 DFSVDYFALGVTLYEMIAAR 386
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 22/211 (10%)
Query: 424 FSSDNKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQ 476
+ + +LG G F V K LQ + KR ++SS +G+ E+ + E++++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H N++++ + + +LI E + L ++ A++ L + E + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYY 129
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPK----ISDFGMA-RIFGGDQIEENTNRVVGTYG 591
LH L+I H DLK N++L PK I DFG+A +I G++ + + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPE 182
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
++APE ++D++S GV+ ++ G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 424 FSSDNKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQ 476
+ + +LG G F V K LQ + KR ++SS +G+ E+ + E++++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H N++++ + + +LI E + L ++ A++ L + E + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYY 129
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPK----ISDFGMA-RIFGGDQIEENTNRVVGTYG 591
LH L+I H DLK N++L PK I DFG+A +I G++ + + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPE 182
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVL 615
++APE ++D++S GV+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 43/230 (18%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y +L+ + +A+K+LSR + E+ L+ + H+N++ +L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 485 GCCIEEQEKMLIYEYLPNKSL----DVYI--------FDEAKRSLLDWSKRFEIICGIAR 532
+ P KSL DVYI + + LD + ++ +
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
GI +LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM--MTPYVVTRY-Y 191
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG--RRNNTFHLEQGSGSWNLV 640
APE + + D++S G ++ E+I G T H++Q WN V
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ----WNKV 237
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 22/211 (10%)
Query: 424 FSSDNKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQ 476
+ + +LG G F V K LQ + KR ++SS +G+ E+ + E++++ ++Q
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H N++++ + + +LI E + L ++ A++ L + E + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYY 129
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPK----ISDFGMA-RIFGGDQIEENTNRVVGTYG 591
LH L+I H DLK N++L PK I DFG+A +I G++ + + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPE 182
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
++APE ++D++S GV+ ++ G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEI----AVKRLSRSSGQGIEEFKTEIALIAQL-Q 476
DF +G G + V L+ I VK+ + + I+ +TE + Q
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H LV + C E + EY+ L ++ + +R L + RF I+ + Y
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARF-YSAEISLALNY 136
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPE 596
LH+ II+RDLK NVLLD+ + K++D+GM + G + + T+ GT Y+APE
Sbjct: 137 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPE 191
Query: 597 YAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ D ++ GVL+ E++ GR
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 424 FSSDNKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQ 476
+ + +LG G F V K LQ + KR ++SS +G+ E+ + E++++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H N++++ + + +LI E + L ++ A++ L + E + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYY 129
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPK----ISDFGMA-RIFGGDQIEENTNRVVGTYG 591
LH L+I H DLK N++L PK I DFG+A +I G++ + + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPE 182
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVL 615
++APE ++D++S GV+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 424 FSSDNKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQ 476
+ + +LG G F V K LQ + KR ++SS +G+ E+ + E++++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H N++++ + + +LI E + L ++ A++ L + E + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYY 129
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPK----ISDFGMA-RIFGGDQIEENTNRVVGTYG 591
LH L+I H DLK N++L PK I DFG+A +I G++ + + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPE 182
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVL 615
++APE ++D++S GV+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 26/240 (10%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQN------GKEIAVKRLSRSSGQGIEEFKTEIALIAQ 474
T+D+ +LG+G F V + V + K I K+LS Q +E E +
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER---EARICRL 86
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
L+H N+V + EE L+++ + L D R + I I +
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIHQILESV 143
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMN---PKISDFGMARIFGGDQIEENTNRVVGTYG 591
++HQ I+HRDLK N+LL + K++DFG+A G+Q + GT G
Sbjct: 144 NHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ--QAWFGFAGTPG 198
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILG------RRNNTFHLEQGSGSWNLVGHVWD 645
Y++PE + + D+++ GV+L +++G + + + +G+++ WD
Sbjct: 199 YLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWD 258
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 33/227 (14%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQH-- 477
+DF LG+G FG V K + + A+K++ R + + + +E+ L+A L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQY 63
Query: 478 -----------RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEI 526
RN V ++ + EY N++L I E D + + +
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD--EYWRL 121
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMAR-------IFGGDQ- 578
I + Y+H IIHR+LK N+ +D + N KI DFG+A+ I D
Sbjct: 122 FRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 579 ----IEENTNRVVGTYGYMAPEYA-MEGLFSTKSDVYSFGVLLLEII 620
+N +GT Y+A E G ++ K D YS G++ E I
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 43/258 (16%)
Query: 402 SRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSV---YKGVLQNGKEIAVKRLSRSS 458
S+R++ + V + + + +G G G V Y +L+ + +A+K+LSR
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPF 61
Query: 459 GQGIEEFKT--EIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSL----DVYIFDE 512
+ E+ L+ + H+N++ +L + P KSL DVYI E
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVME 109
Query: 513 --------AKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPK 564
+ LD + ++ + GI +LH IIHRDLK SN+++ + K
Sbjct: 110 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLK 166
Query: 565 ISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG-- 622
I DFG+AR G + T VV Y Y APE + + D++S G ++ E+I G
Sbjct: 167 ILDFGLARTAGTSFM--MTPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
Query: 623 RRNNTFHLEQGSGSWNLV 640
T H++Q WN V
Sbjct: 224 LFPGTDHIDQ----WNKV 237
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSS--GQGIE-EFKTEIALIAQLQH 477
+DF LG+G FG+VY + K I A+K L +S +G+E + + EI + + L+H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 478 RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYL 537
N++ + + + L+ E+ P L + K D + + +A + Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYC 130
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEY 597
H+ ++IHRD+K N+L+ KI+DFG + + GT Y+ PE
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEM 183
Query: 598 AMEGLFSTKSDVYSFGVLLLEIILG 622
K D++ GVL E ++G
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 430 LGEGGFGSVYKGVLQNGKE----IAVKRLSRSSGQGI-EEFKTEIALIAQLQHRNLVSIL 484
+GEG FG V++G+ + + +A+K + + E+F E + Q H ++V ++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
G I E +I E L ++ + ++ LD + ++ + YL R
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 545 IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
+HRD+ A NVL+ + K+ DFG++R + D ++ +MAPE F+
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 605 TKSDVYSFGVLLLEIIL 621
+ SDV+ FGV + EI++
Sbjct: 571 SASDVWMFGVCMWEILM 587
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 20/219 (9%)
Query: 416 NIAAATNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQ 474
N +D +LG G +G V K + +G+ +AVKR+ R++ E+ + + L
Sbjct: 45 NFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMDLDIS 103
Query: 475 LQHRN---LVSILGCCIEEQEKMLIYEYLPNKSLDVY---IFDEAKRSLLDWSKRFEIIC 528
++ + V+ G E + + E + + SLD + + D+ + D + I
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGK--IAV 160
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I + + +LH S+L +IHRD+K SNVL++A K+ DFG++ + D + + + G
Sbjct: 161 SIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISG-YLVDSVAKTID--AG 215
Query: 589 TYGYMAPEYAMEGL----FSTKSDVYSFGVLLLEIILGR 623
YMAPE L +S KSD++S G+ ++E+ + R
Sbjct: 216 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 254
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 424 FSSDNKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQ 476
+ + +LG G F V K LQ + KR ++SS +G+ E+ + E++++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H N++++ + + +LI E + L ++ A++ L + E + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYY 129
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPK----ISDFGMA-RIFGGDQIEENTNRVVGTYG 591
LH L+I H DLK N++L PK I DFG+A +I G++ + + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPE 182
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVL 615
++APE ++D++S GV+
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 22/211 (10%)
Query: 424 FSSDNKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQ 476
+ + +LG G F V K LQ + KR ++SS +G+ E+ + E++++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
H N++++ + + +LI E + L ++ A++ L + E + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYY 129
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPK----ISDFGMA-RIFGGDQIEENTNRVVGTYG 591
LH L+I H DLK N++L PK I DFG+A +I G++ + + GT
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTPE 182
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
++APE ++D++S GV+ ++ G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 35/254 (13%)
Query: 402 SRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSV---YKGVLQNGKEIAVKRLSRSS 458
S+R++ + V + + + +G G G V Y +L+ + +A+K+LSR
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPF 61
Query: 459 GQGIEEFKT--EIALIAQLQHRNLVSILGC-----CIEEQEKMLIYEYLPNKSLDVYI-- 509
+ E+ L+ + H+N++ +L +EE + + I L + +L I
Sbjct: 62 QNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM 121
Query: 510 -FDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDF 568
D + S L ++++CGI +LH IIHRDLK SN+++ + KI DF
Sbjct: 122 ELDHERMSYL----LYQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDATLKILDF 170
Query: 569 GMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG--RRNN 626
G+AR G + T VV Y Y APE + + D++S G ++ E+I G
Sbjct: 171 GLARTAGTSFM--MTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
Query: 627 TFHLEQGSGSWNLV 640
T H++Q WN V
Sbjct: 228 TDHIDQ----WNKV 237
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 102/195 (52%), Gaps = 12/195 (6%)
Query: 429 KLGEGGFGSVYKGVLQNGKEI-AVKRLS-RSSGQGIEEFKT-EIALIAQLQHRNLVSILG 485
K+GEG +G+V+K + EI A+KR+ +G+ EI L+ +L+H+N+V +
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRI 545
+++ L++E+ ++ L Y FD L D + + +G+ + H + +
Sbjct: 69 VLHSDKKLTLVFEFC-DQDLKKY-FDSCNGDL-DPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 546 IHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM-EGLFS 604
+HRDLK N+L++ K+++FG+AR FG + + VV T Y P+ L+S
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 605 TKSDVYSFGVLLLEI 619
T D++S G + E+
Sbjct: 181 TSIDMWSAGCIFAEL 195
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 38/214 (17%)
Query: 429 KLGEGGFGSVYKGV-LQNGKEIAVKRL---SRSSGQGIEEFKTEIALIAQLQHRNLVSIL 484
K+G+G FG V+K + G+++A+K++ + G I + EI ++ L+H N+V+++
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNLI 83
Query: 485 GCCIEEQEKM--------LIYEY-------LPNKSLDVYIFDEAKRSLLDWSKRFEIICG 529
C + L++++ L + L + E KR ++
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR----------VMQM 133
Query: 530 IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFG---GDQIEENTNRV 586
+ G+ Y+H++ +I+HRD+KA+NVL+ K++DFG+AR F Q NRV
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 587 VGTYGYMAPEYAM-EGLFSTKSDVYSFGVLLLEI 619
V T Y PE + E + D++ G ++ E+
Sbjct: 191 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 20/230 (8%)
Query: 428 NKLGEGGFGSVYKGV-LQNGKEIAVKRLS--RSSGQGIEEFKTEIALIAQLQHRNLVSIL 484
+LG+G F V + V + G+E A K ++ + S + ++ + E + L+H N+V +
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
EE LI++ + L D R + I I +L+ HQ +
Sbjct: 88 DSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MG 141
Query: 545 IIHRDLKASNVLLDAAMN---PKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
++HRDLK N+LL + + K++DFG+A G+Q + GT GY++PE +
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ--QAWFGFAGTPGYLSPEVLRKD 199
Query: 602 LFSTKSDVYSFGVLLLEIILG------RRNNTFHLEQGSGSWNLVGHVWD 645
+ D+++ GV+L +++G + + + +G+++ WD
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD 249
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 43/258 (16%)
Query: 402 SRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSV---YKGVLQNGKEIAVKRLSRSS 458
S+R++ + V + + + +G G G V Y +L+ + +A+K+LSR
Sbjct: 5 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPF 62
Query: 459 GQGIEEFKT--EIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSL----DVYIFDE 512
+ E+ L+ + H+N++ +L + P KSL DVYI E
Sbjct: 63 QNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVME 110
Query: 513 --------AKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPK 564
+ LD + ++ + GI +LH IIHRDLK SN+++ + K
Sbjct: 111 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLK 167
Query: 565 ISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG-- 622
I DFG+AR G + T VV Y Y APE + + D++S G ++ E+I G
Sbjct: 168 ILDFGLARTAGTSFM--MTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 224
Query: 623 RRNNTFHLEQGSGSWNLV 640
T H++Q WN V
Sbjct: 225 LFPGTDHIDQ----WNKV 238
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 499 YLPNKSLDVYIFDEAKRSLL-DWSKRFEIIC---GIARGILYLHQDSRLRIIHRDLKASN 554
++ KSL +EA L D+ +IC +A+G+ +L + + IHRDL A N
Sbjct: 172 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 228
Query: 555 VLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGV 614
+LL KI DFG+AR D +MAPE + +++ +SDV+SFGV
Sbjct: 229 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 288
Query: 615 LLLEIILGRRNNTFHLEQGSGSWNLVG---HVWDLWKEGTAMEAVDKSLGESCCAPEILR 671
LL EI F L G+ + V KEGT M A D + PE+ +
Sbjct: 289 LLWEI--------FSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYT------TPEMYQ 332
Query: 672 CIHLGLLCVQEQATDRPNMSAVVSMLGS 699
+ L C + + RP S +V LG+
Sbjct: 333 TM---LDCWHGEPSQRPTFSELVEHLGN 357
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 499 YLPNKSLDVYIFDEAKRSLL-DWSKRFEIIC---GIARGILYLHQDSRLRIIHRDLKASN 554
++ KSL +EA L D+ +IC +A+G+ +L + + IHRDL A N
Sbjct: 174 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 230
Query: 555 VLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGV 614
+LL KI DFG+AR D +MAPE + +++ +SDV+SFGV
Sbjct: 231 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 290
Query: 615 LLLEIILGRRNNTFHLEQGSGSWNLVG---HVWDLWKEGTAMEAVDKSLGESCCAPEILR 671
LL EI F L G+ + V KEGT M A D + PE+ +
Sbjct: 291 LLWEI--------FSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYT------TPEMYQ 334
Query: 672 CIHLGLLCVQEQATDRPNMSAVVSMLGS 699
+ L C + + RP S +V LG+
Sbjct: 335 TM---LDCWHGEPSQRPTFSELVEHLGN 359
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y VL + +A+K+LSR + E+ L+ + H+N++S+L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 485 GCCIEEQEKMLIYEYLPNKSL----DVYI--------FDEAKRSLLDWSKRFEIICGIAR 532
+ P K+L DVY+ + + LD + ++ +
Sbjct: 90 NV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLX 137
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
GI +LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM--MTPYVVTRY-Y 191
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
APE + + D++S G ++ E++ R F WN V
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKV 237
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 22/218 (10%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHR 478
++DF + LGEG +G V + EI + + + +T EI ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 479 NLVSILGC----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
N+++I E ++ I + L L I + + L D ++ I R +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDHIQY-FIYQTLRAV 125
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF---GGDQIEEN-----TNRV 586
LH + +IHRDLK SN+L+++ + K+ DFG+ARI D E
Sbjct: 126 KVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEX 182
Query: 587 VGTYGYMAPEYAM-EGLFSTKSDVYSFGVLLLEIILGR 623
V T Y APE + +S DV+S G +L E+ L R
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 43/258 (16%)
Query: 402 SRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSV---YKGVLQNGKEIAVKRLSRSS 458
S+R++ + V + + + +G G G V Y +L+ + +A+K+LSR
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPF 61
Query: 459 GQGIEEFKT--EIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSL----DVYIFDE 512
+ E+ L+ + H+N++ +L + P KSL DVYI E
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVME 109
Query: 513 --------AKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPK 564
+ LD + ++ + GI +LH IIHRDLK SN+++ + K
Sbjct: 110 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLK 166
Query: 565 ISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG-- 622
I DFG+AR G + T VV Y Y APE + + D++S G ++ E+I G
Sbjct: 167 ILDFGLARTAGTSFM--MTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
Query: 623 RRNNTFHLEQGSGSWNLV 640
T H++Q WN V
Sbjct: 224 LFPGTDHIDQ----WNKV 237
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 35/254 (13%)
Query: 402 SRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSV---YKGVLQNGKEIAVKRLSRSS 458
S+R++ + V + + + +G G G V Y +L+ + +A+K+LSR
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPF 61
Query: 459 GQGIEEFKT--EIALIAQLQHRNLVSILGC-----CIEEQEKMLIYEYLPNKSLDVYI-- 509
+ E+ L+ + H+N++ +L +EE + + I L + +L I
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM 121
Query: 510 -FDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDF 568
D + S L ++++CGI +LH IIHRDLK SN+++ + KI DF
Sbjct: 122 ELDHERMSYL----LYQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 170
Query: 569 GMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG--RRNN 626
G+AR G + T VV Y Y APE + + D++S G ++ E+I G
Sbjct: 171 GLARTAGTSFM--MTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
Query: 627 TFHLEQGSGSWNLV 640
T H++Q WN V
Sbjct: 228 TDHIDQ----WNKV 237
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 35/254 (13%)
Query: 402 SRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSV---YKGVLQNGKEIAVKRLSRSS 458
S+R++ + V + + + +G G G V Y +L+ + +A+K+LSR
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPF 61
Query: 459 GQGIEEFKT--EIALIAQLQHRNLVSILGC-----CIEEQEKMLIYEYLPNKSLDVYI-- 509
+ E+ L+ + H+N++ +L +EE + + I L + +L I
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM 121
Query: 510 -FDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDF 568
D + S L ++++CGI +LH IIHRDLK SN+++ + KI DF
Sbjct: 122 ELDHERMSYL----LYQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDATLKILDF 170
Query: 569 GMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG--RRNN 626
G+AR G + T VV Y Y APE + + D++S G ++ E+I G
Sbjct: 171 GLARTAGTSFM--MTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227
Query: 627 TFHLEQGSGSWNLV 640
T H++Q WN V
Sbjct: 228 TDHIDQ----WNKV 237
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 43/258 (16%)
Query: 402 SRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSV---YKGVLQNGKEIAVKRLSRSS 458
S+R++ + V + + + +G G G V Y +L+ + +A+K+LSR
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPF 61
Query: 459 GQGIEEFKT--EIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSL----DVYIFDE 512
+ E+ L+ + H+N++ +L + P KSL DVYI E
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVME 109
Query: 513 --------AKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPK 564
+ LD + ++ + GI +LH IIHRDLK SN+++ + K
Sbjct: 110 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLK 166
Query: 565 ISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG-- 622
I DFG+AR G + T VV Y Y APE + + D++S G ++ E+I G
Sbjct: 167 ILDFGLARTAGTSFM--MTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
Query: 623 RRNNTFHLEQGSGSWNLV 640
T H++Q WN V
Sbjct: 224 LFPGTDHIDQ----WNKV 237
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 22/218 (10%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHR 478
++DF + LGEG +G V + EI + + + +T EI ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 479 NLVSILGC----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
N+++I E ++ I + L L I + + L D ++ I R +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDHIQY-FIYQTLRAV 125
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF---GGDQIEEN-----TNRV 586
LH + +IHRDLK SN+L+++ + K+ DFG+ARI D E
Sbjct: 126 KVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEY 182
Query: 587 VGTYGYMAPEYAM-EGLFSTKSDVYSFGVLLLEIILGR 623
V T Y APE + +S DV+S G +L E+ L R
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 38/214 (17%)
Query: 429 KLGEGGFGSVYKGV-LQNGKEIAVKRL---SRSSGQGIEEFKTEIALIAQLQHRNLVSIL 484
K+G+G FG V+K + G+++A+K++ + G I + EI ++ L+H N+V+++
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNLI 83
Query: 485 GCCIEEQEKM--------LIYEY-------LPNKSLDVYIFDEAKRSLLDWSKRFEIICG 529
C + L++++ L + L + E KR ++
Sbjct: 84 EICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR----------VMQM 133
Query: 530 IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFG---GDQIEENTNRV 586
+ G+ Y+H++ +I+HRD+KA+NVL+ K++DFG+AR F Q NRV
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 587 VGTYGYMAPEYAM-EGLFSTKSDVYSFGVLLLEI 619
V T Y PE + E + D++ G ++ E+
Sbjct: 191 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 499 YLPNKSLDVYIFDEAKRSLL-DWSKRFEIIC---GIARGILYLHQDSRLRIIHRDLKASN 554
++ KSL +EA L D+ +IC +A+G+ +L + + IHRDL A N
Sbjct: 165 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 221
Query: 555 VLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGV 614
+LL KI DFG+AR D +MAPE + +++ +SDV+SFGV
Sbjct: 222 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 281
Query: 615 LLLEIILGRRNNTFHLEQGSGSWNLVG---HVWDLWKEGTAMEAVDKSLGESCCAPEILR 671
LL EI F L G+ + V KEGT M A D + PE+ +
Sbjct: 282 LLWEI--------FSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYT------TPEMYQ 325
Query: 672 CIHLGLLCVQEQATDRPNMSAVVSMLGS 699
+ L C + + RP S +V LG+
Sbjct: 326 TM---LDCWHGEPSQRPTFSELVEHLGN 350
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 31/224 (13%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y VL + +A+K+LSR + E+ L+ + H+N++S+L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 485 GC-----CIEEQEKMLIYEYLPNKSLDVYI---FDEAKRSLLDWSKRFEIICGIARGILY 536
+EE + + + L + +L I D + S L ++++CGI +
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL----LYQMLCGIK----H 141
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPE 596
LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM--MTPYVVTRY-YRAPE 195
Query: 597 YAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
+ + D++S G ++ E++ R F WN V
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKV 237
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHR 478
++DF + LGEG +G V + EI + + + +T EI ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 479 NLVSILGC----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
N+++I E ++ I + L L I + + L D ++ I R +
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDHIQY-FIYQTLRAV 125
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF---GGDQIEENTNR-----V 586
LH + +IHRDLK SN+L+++ + K+ DFG+ARI D E +
Sbjct: 126 KVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEF 182
Query: 587 VGTYGYMAPEYAM-EGLFSTKSDVYSFGVLLLEIILGR 623
V T Y APE + +S DV+S G +L E+ L R
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 499 YLPNKSLDVYIFDEAKRSLL-DWSKRFEIIC---GIARGILYLHQDSRLRIIHRDLKASN 554
++ KSL +EA L D+ +IC +A+G+ +L + + IHRDL A N
Sbjct: 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 223
Query: 555 VLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGV 614
+LL KI DFG+AR D +MAPE + +++ +SDV+SFGV
Sbjct: 224 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 283
Query: 615 LLLEIILGRRNNTFHLEQGSGSWNLVG---HVWDLWKEGTAMEAVDKSLGESCCAPEILR 671
LL EI F L G+ + V KEGT M A D + PE+ +
Sbjct: 284 LLWEI--------FSL--GASPYPGVKIDEEFCRRLKEGTRMRAPDYT------TPEMYQ 327
Query: 672 CIHLGLLCVQEQATDRPNMSAVVSMLGS 699
+ L C + + RP S +V LG+
Sbjct: 328 TM---LDCWHGEPSQRPTFSELVEHLGN 352
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVK-----RLSRSSGQGIEEFKTEIALIAQLQHRNLVSI 483
+G+G F V + + + G++ AVK + + S G E+ K E ++ L+H ++V +
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 484 LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL----YLHQ 539
L + +++E++ L F+ KR+ + + R IL Y H
Sbjct: 92 LETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 540 DSRLRIIHRDLKASNVLLDAAMNP---KISDFGMARIFGGDQIEENTNRVVGTYGYMAPE 596
++ IIHRD+K NVLL + N K+ DFG+A G + VGT +MAPE
Sbjct: 149 NN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR--VGTPHFMAPE 203
Query: 597 YAMEGLFSTKSDVYSFGVLLLEIILG 622
+ DV+ GV+L ++ G
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 38/214 (17%)
Query: 429 KLGEGGFGSVYKGV-LQNGKEIAVKRL---SRSSGQGIEEFKTEIALIAQLQHRNLVSIL 484
K+G+G FG V+K + G+++A+K++ + G I + EI ++ L+H N+V+++
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNLI 82
Query: 485 GCCIEEQEKM--------LIYEY-------LPNKSLDVYIFDEAKRSLLDWSKRFEIICG 529
C + L++++ L + L + E KR ++
Sbjct: 83 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR----------VMQM 132
Query: 530 IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFG---GDQIEENTNRV 586
+ G+ Y+H++ +I+HRD+KA+NVL+ K++DFG+AR F Q NRV
Sbjct: 133 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 189
Query: 587 VGTYGYMAPEYAM-EGLFSTKSDVYSFGVLLLEI 619
V T Y PE + E + D++ G ++ E+
Sbjct: 190 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 137/336 (40%), Gaps = 31/336 (9%)
Query: 414 LSNIAAATNDFSSDNKLGEGGFGSVYK-GVLQNGKEIAVKRLSRSSGQ---GIEEFKTEI 469
L N F LG+GGFG V V GK A K+L + + G E
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---EI 526
++ ++ R +VS+ + L+ + L +I+ + + F EI
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMA-RIFGGDQIEENTNR 585
CG+ LH R RI++RDLK N+LLD + +ISD G+A + G I+
Sbjct: 296 CCGLED----LH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--- 345
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG-----RRNNTFHLEQGSGSWNLV 640
VGT GYMAPE ++ D ++ G LL E+I G +R E+ LV
Sbjct: 346 -VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE---RLV 401
Query: 641 GHVWDLWKEGTAMEAVDKSLGESCCAP-EILRCIHLGLLCVQEQAT-DRPNMSAVVSMLG 698
V + + E + +A C P E L C V+E + N + + G
Sbjct: 402 KEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGA--G 459
Query: 699 SDNAPSSPKHPAFIAKGLSNVDEFWTGEGVTTSVND 734
P P A K + ++++F T +GV D
Sbjct: 460 MLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTD 495
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 38/214 (17%)
Query: 429 KLGEGGFGSVYKGV-LQNGKEIAVKRL---SRSSGQGIEEFKTEIALIAQLQHRNLVSIL 484
K+G+G FG V+K + G+++A+K++ + G I + EI ++ L+H N+V+++
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNLI 83
Query: 485 GCCIEEQEKM--------LIYEY-------LPNKSLDVYIFDEAKRSLLDWSKRFEIICG 529
C + L++++ L + L + E KR ++
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR----------VMQM 133
Query: 530 IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFG---GDQIEENTNRV 586
+ G+ Y+H++ +I+HRD+KA+NVL+ K++DFG+AR F Q NRV
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 587 VGTYGYMAPEYAM-EGLFSTKSDVYSFGVLLLEI 619
V T Y PE + E + D++ G ++ E+
Sbjct: 191 V-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 26/240 (10%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAV-----KRLSRSSGQGIEEFKTEIALIAQ 474
T ++ +LG+G F V + V + G+E A K+LS Q +E E +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER---EARICRL 66
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
L+H N+V + EE LI++ + L I S D S I I +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAV 123
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMN---PKISDFGMARIFGGDQIEENTNRVVGTYG 591
L+ HQ + ++HR+LK N+LL + + K++DFG+A G+Q + GT G
Sbjct: 124 LHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ--QAWFGFAGTPG 178
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILG------RRNNTFHLEQGSGSWNLVGHVWD 645
Y++PE + + D+++ GV+L +++G + + + +G+++ WD
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD 238
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 137/336 (40%), Gaps = 31/336 (9%)
Query: 414 LSNIAAATNDFSSDNKLGEGGFGSVYK-GVLQNGKEIAVKRLSRSSGQ---GIEEFKTEI 469
L N F LG+GGFG V V GK A K+L + + G E
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---EI 526
++ ++ R +VS+ + L+ + L +I+ + + F EI
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMA-RIFGGDQIEENTNR 585
CG+ LH R RI++RDLK N+LLD + +ISD G+A + G I+
Sbjct: 296 CCGLED----LH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--- 345
Query: 586 VVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG-----RRNNTFHLEQGSGSWNLV 640
VGT GYMAPE ++ D ++ G LL E+I G +R E+ LV
Sbjct: 346 -VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE---RLV 401
Query: 641 GHVWDLWKEGTAMEAVDKSLGESCCAP-EILRCIHLGLLCVQEQAT-DRPNMSAVVSMLG 698
V + + E + +A C P E L C V+E + N + + G
Sbjct: 402 KEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGA--G 459
Query: 699 SDNAPSSPKHPAFIAKGLSNVDEFWTGEGVTTSVND 734
P P A K + ++++F T +GV D
Sbjct: 460 MLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTD 495
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 430 LGEGGFGSVY--KGVLQ--NGKEIAVKRLSRSSGQGIEEFKTEIA--LIAQLQHRNLVSI 483
LG+G FG V+ + V + +G A+K L +++ + + +T++ ++A + H +V +
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 484 LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRL 543
E + LI ++L L + E + D +F + +A G+ +LH L
Sbjct: 96 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV--KF-YLAELALGLDHLHS---L 149
Query: 544 RIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLF 603
II+RDLK N+LLD + K++DFG+++ E+ GT YMAPE
Sbjct: 150 GIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCGTVEYMAPEVVNRQGH 207
Query: 604 STKSDVYSFGVLLLEIILG 622
S +D +S+GVL+ E++ G
Sbjct: 208 SHSADWWSYGVLMFEMLTG 226
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEI--AVKRLSRSSGQGIEEFKTEIA-- 470
SN A +DF +G+G FG V +E+ AVK L + + +E K ++
Sbjct: 31 SNPHAKPSDFHFLKVIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKAILKKKEEKHIMSER 89
Query: 471 --LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIIC 528
L+ ++H LV + + + +Y+ L ++ + +R L+ RF
Sbjct: 90 NVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL--QRERCFLEPRARF-YAA 146
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN--TNRV 586
IA + YLH L I++RDLK N+LLD+ + ++DFG+ + + IE N T+
Sbjct: 147 EIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK----ENIEHNSTTSTF 199
Query: 587 VGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
GT Y+APE + + D + G +L E++ G
Sbjct: 200 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 112/219 (51%), Gaps = 20/219 (9%)
Query: 416 NIAAATNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQ 474
++ +D +LG G +G V K + +G+ +AVKR+ R++ E+ + + L
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMDLDIS 59
Query: 475 LQHRN---LVSILGCCIEEQEKMLIYEYLPNKSLDVY---IFDEAKRSLLDWSKRFEIIC 528
++ + V+ G E + + E + + SLD + + D+ + D + I
Sbjct: 60 MRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGK--IAV 116
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I + + +LH S+L +IHRD+K SNVL++A K+ DFG++ + D + ++ + G
Sbjct: 117 SIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISG-YLVDDVAKDID--AG 171
Query: 589 TYGYMAPEYAMEGL----FSTKSDVYSFGVLLLEIILGR 623
YMAPE L +S KSD++S G+ ++E+ + R
Sbjct: 172 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 210
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y VL + +A+K+LSR + E+ L+ + H+N++S+L
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 485 GCCIEEQEKMLIYEYLPNKSL----DVYIFDE--------AKRSLLDWSKRFEIICGIAR 532
+ P K+L DVY+ E + LD + ++ +
Sbjct: 83 NV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLX 130
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
GI +LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM--MTPYVVTRY-Y 184
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
APE + + D++S G ++ E++ R F WN V
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKV 230
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y VL + +A+K+LSR + E+ L+ + H+N++S+L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 485 GCCIEEQEKMLIYEYLPNKSL----DVYIFDE--------AKRSLLDWSKRFEIICGIAR 532
+ P K+L DVY+ E + LD + ++ +
Sbjct: 90 NV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLX 137
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
GI +LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM--MTPYVVTRY-Y 191
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
APE + + D++S G ++ E++ R F WN V
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKV 237
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 31/224 (13%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y VL + +A+K+LSR + E+ L+ + H+N++S+L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 485 GC-----CIEEQEKMLIYEYLPNKSLDVYI---FDEAKRSLLDWSKRFEIICGIARGILY 536
+EE + + + L + +L I D + S L ++++CGI +
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL----LYQMLCGIK----H 141
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPE 596
LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM--MTPYVVTRY-YRAPE 195
Query: 597 YAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
+ + D++S G ++ E++ R F WN V
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKV 237
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 28/212 (13%)
Query: 424 FSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQHRNL 480
+ S +G G +GSV + ++G+++A+K+LSR I + E+ L+ +QH N+
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 85
Query: 481 VSILGCCIEEQEKMLIYEY---LPNKSLDV-----YIFDEAKRSLLDWSKRFEIICGIAR 532
+ +L Y++ +P D+ F E K L + + +
Sbjct: 86 IGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYL--------VYQMLK 137
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
G+ Y+H ++HRDLK N+ ++ KI DFG+AR E T VV T Y
Sbjct: 138 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADA----EMTGYVV-TRWY 189
Query: 593 MAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
APE + + ++ D++S G ++ E++ G+
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 28/212 (13%)
Query: 424 FSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQHRNL 480
+ S +G G +GSV + ++G+++A+K+LSR I + E+ L+ +QH N+
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 103
Query: 481 VSILGCCIEEQEKMLIYEY---LPNKSLDVYI-----FDEAKRSLLDWSKRFEIICGIAR 532
+ +L Y++ +P D+ F E K L + + +
Sbjct: 104 IGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYL--------VYQMLK 155
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
G+ Y+H ++HRDLK N+ ++ KI DFG+AR E T VV T Y
Sbjct: 156 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADA----EMTGYVV-TRWY 207
Query: 593 MAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
APE + + ++ D++S G ++ E++ G+
Sbjct: 208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y VL + +A+K+LSR + E+ L+ + H+N++S+L
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 485 GCCIEEQEKMLIYEYLPNKSL----DVYIFDE--------AKRSLLDWSKRFEIICGIAR 532
+ P K+L DVY+ E + LD + ++ +
Sbjct: 128 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 175
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
GI +LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRY-Y 229
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
APE + + D++S G ++ E++ R F WN V
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKV 275
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 37/236 (15%)
Query: 402 SRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSV---YKGVLQNGKEIAVKRLSRSS 458
S+R++ + V + + + +G G G V Y +L+ + +A+K+LSR
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPF 61
Query: 459 GQGIEEFKT--EIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSL----DVYIFDE 512
+ E+ L+ + H+N++ +L + P KSL DVYI E
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVME 109
Query: 513 --------AKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPK 564
+ LD + ++ + GI +LH IIHRDLK SN+++ + K
Sbjct: 110 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLK 166
Query: 565 ISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
I DFG+AR G + E VV Y Y APE + + D++S G ++ E++
Sbjct: 167 ILDFGLARTAGTSFMME--PEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 115/251 (45%), Gaps = 29/251 (11%)
Query: 402 SRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSV---YKGVLQNGKEIAVKRLSRSS 458
S +S++ V + + +G G G V + VL G +AVK+LSR
Sbjct: 2 SHMDSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPF 59
Query: 459 GQGIEEFKT--EIALIAQLQHRNLVSILGC-----CIEEQEKMLIYEYLPNKSLDVYIFD 511
+ E+ L+ + H+N++S+L +EE + + + L + +L I
Sbjct: 60 QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM 119
Query: 512 EAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMA 571
E + + ++++CGI +LH IIHRDLK SN+++ + KI DFG+A
Sbjct: 120 ELDHERMSYL-LYQMLCGIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 171
Query: 572 RIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGRR--NNTFH 629
R + + T VV Y Y APE + + D++S G ++ E++ G T H
Sbjct: 172 RTASTNFM--MTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDH 228
Query: 630 LEQGSGSWNLV 640
++Q WN V
Sbjct: 229 IDQ----WNKV 235
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 12/203 (5%)
Query: 424 FSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNL 480
+ K+GEG +G V+K ++ G+ +A+K+ S + + EI ++ QL+H NL
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNL 64
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V++L ++ L++EY + L + D +R + + + I + + + H+
Sbjct: 65 VNLLEVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVK-SITWQTLQAVNFCHKH 121
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM- 599
+ IHRD+K N+L+ K+ DFG AR+ G + + V T Y +PE +
Sbjct: 122 N---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS--DYYDDEVATRWYRSPELLVG 176
Query: 600 EGLFSTKSDVYSFGVLLLEIILG 622
+ + DV++ G + E++ G
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 30/205 (14%)
Query: 430 LGEGGFGSVY--KGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
LG G F V+ K L GK A+K + +S + EIA++ +++H N+V++
Sbjct: 17 LGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 488 IEEQEKMLIYEY-----LPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSR 542
L+ + L ++ L+ ++ E SL +I + + YLH++
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL--------VIQQVLSAVKYLHENG- 126
Query: 543 LRIIHRDLKASNVL-LDAAMNPKI--SDFGMARIFGGDQIEEN--TNRVVGTYGYMAPEY 597
I+HRDLK N+L L N KI +DFG++++ E+N + GT GY+APE
Sbjct: 127 --IVHRDLKPENLLYLTPEENSKIMITDFGLSKM------EQNGIMSTACGTPGYVAPEV 178
Query: 598 AMEGLFSTKSDVYSFGVLLLEIILG 622
+ +S D +S GV+ ++ G
Sbjct: 179 LAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 421 TNDFSSDNKLGEGGFGSVY--KGVLQNGKEIAVKRLSRSSGQGIEE---FKTEIALIAQL 475
++ + KLG G +G V K L G E A+K + +SS E+A++ QL
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 476 QHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
H N++ + +++ L+ E L I K S +D + I+ + G
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSGTT 135
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNP---KISDFGMARIF--GGDQIEENTNRVVGTY 590
YLH+ + I+HRDLK N+LL++ KI DFG++ F GG E +GT
Sbjct: 136 YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER-----LGTA 187
Query: 591 GYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y+APE + + K DV+S GV+L ++ G
Sbjct: 188 YYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 43/261 (16%)
Query: 399 LDDSRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSV---YKGVLQNGKEIAVKRLS 455
+ S+R++ + V + + + +G G G V Y +L+ + +A+K+LS
Sbjct: 3 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLS 60
Query: 456 RSSGQGIEEFKT--EIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSL----DVYI 509
R + E+ L+ + H+N++ +L + P KSL DVYI
Sbjct: 61 RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYI 108
Query: 510 FDE--------AKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAM 561
E + LD + ++ + GI +LH IIHRDLK SN+++ +
Sbjct: 109 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 165
Query: 562 NPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIIL 621
KI DFG+AR G + V T Y APE + + D++S G ++ E+I
Sbjct: 166 TLKILDFGLARTAGTSFM---MVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 222
Query: 622 G--RRNNTFHLEQGSGSWNLV 640
G T H++Q WN V
Sbjct: 223 GGVLFPGTDHIDQ----WNKV 239
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 49/218 (22%)
Query: 428 NKLGEGGFGSVY--KGVLQNGKEIAVKRLSRSSGQGIEE---FKTEIALIAQLQHRNLVS 482
KLG G +G V K L G E A+K + +SS E+A++ QL H N+
Sbjct: 10 KKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNI-- 66
Query: 483 ILGCCIEEQEKMLIYEYLPNKS-----LDVY----IFDE----AKRSLLDWSKRFEIICG 529
M +YE+ +K ++VY +FDE K S +D + I+
Sbjct: 67 -----------MKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQ 112
Query: 530 IARGILYLHQDSRLRIIHRDLKASNVLLDAAMNP---KISDFGMARIF--GGDQIEENTN 584
+ G YLH+ + I+HRDLK N+LL++ KI DFG++ F GG E
Sbjct: 113 VLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER--- 166
Query: 585 RVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+GT Y+APE + + K DV+S GV+L ++ G
Sbjct: 167 --LGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 25/208 (12%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
+G+G FG V++G + G+E+AVK S R E EI L+H N++ +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 68
Query: 489 EEQ----EKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD---- 540
++ + L+ +Y + SL FD R + ++ A G+ +LH +
Sbjct: 69 KDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 124
Query: 541 -SRLRIIHRDLKASNVLLDAAMNPKISDFGMA--RIFGGDQIEENTNRVVGTYGYMAPEY 597
+ I HRDLK+ N+L+ I+D G+A D I+ N VGT YMAPE
Sbjct: 125 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 184
Query: 598 AMEGL----FST--KSDVYSFGVLLLEI 619
+ + F + ++D+Y+ G++ EI
Sbjct: 185 LDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
+G+G FG V++G + G+E+AVK S R E EI L+H N++ +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 93
Query: 489 EEQ----EKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD---- 540
++ + L+ +Y + SL FD R + ++ A G+ +LH +
Sbjct: 94 KDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 149
Query: 541 -SRLRIIHRDLKASNVLLDAAMNPKISDFGMA--RIFGGDQIEENTNRVVGTYGYMAPEY 597
+ I HRDLK+ N+L+ I+D G+A D I+ N VGT YMAPE
Sbjct: 150 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 209
Query: 598 A-----MEGLFSTK-SDVYSFGVLLLEI 619
M+ S K +D+Y+ G++ EI
Sbjct: 210 LDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y VL + +A+K+LSR + E+ L+ + H+N++S+L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 485 GCCIEEQEKMLIYEYLPNKSL----DVYIFDE--------AKRSLLDWSKRFEIICGIAR 532
+ P K+L DVY+ E + LD + ++ +
Sbjct: 90 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
GI +LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRY-Y 191
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
APE + + D++S G ++ E++ R F WN V
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKV 237
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y VL + +A+K+LSR + E+ L+ + H+N++S+L
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 485 GCCIEEQEKMLIYEYLPNKSL----DVYIFDE--------AKRSLLDWSKRFEIICGIAR 532
+ P K+L DVY+ E + LD + ++ +
Sbjct: 89 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 136
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
GI +LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRY-Y 190
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
APE + + D++S G ++ E++ R F WN V
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKV 236
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y VL + +A+K+LSR + E+ L+ + H+N++S+L
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 485 GCCIEEQEKMLIYEYLPNKSL----DVYIFDE--------AKRSLLDWSKRFEIICGIAR 532
+ P K+L DVY+ E + LD + ++ +
Sbjct: 91 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 138
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
GI +LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRY-Y 192
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
APE + + D++S G ++ E++ R F WN V
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKV 238
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y VL + +A+K+LSR + E+ L+ + H+N++S+L
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 485 GCCIEEQEKMLIYEYLPNKSL----DVYIFDE--------AKRSLLDWSKRFEIICGIAR 532
+ P K+L DVY+ E + LD + ++ +
Sbjct: 128 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 175
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
GI +LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRY-Y 229
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
APE + + D++S G ++ E++ R F WN V
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKV 275
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y VL + +A+K+LSR + E+ L+ + H+N++S+L
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 485 GCCIEEQEKMLIYEYLPNKSL----DVYIFDE--------AKRSLLDWSKRFEIICGIAR 532
+ P K+L DVY+ E + LD + ++ +
Sbjct: 84 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 131
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
GI +LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRY-Y 185
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
APE + + D++S G ++ E++ R F WN V
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKV 231
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y VL + +A+K+LSR + E+ L+ + H+N++S+L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 485 GCCIEEQEKMLIYEYLPNKSL----DVYIFDE--------AKRSLLDWSKRFEIICGIAR 532
+ P K+L DVY+ E + LD + ++ +
Sbjct: 90 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
GI +LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRY-Y 191
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
APE + + D++S G ++ E++ R F WN V
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKV 237
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 29/223 (13%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V + VL G +AVK+LSR + E+ L+ + H+N++S+L
Sbjct: 32 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 485 GC-----CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQ 539
+EE + + + L + +L I E + + ++++CGI +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYL-LYQMLCGIK----HLHS 144
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM 599
IIHRDLK SN+++ + KI DFG+AR + + T VV Y Y APE +
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM--MTPYVVTRY-YRAPEVIL 198
Query: 600 EGLFSTKSDVYSFGVLLLEIILG--RRNNTFHLEQGSGSWNLV 640
++ D++S G ++ E++ G T H++Q WN V
Sbjct: 199 GMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQ----WNKV 237
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
+G+G FG V++G + G+E+AVK S R E EI L+H N++ +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 70
Query: 489 EEQ----EKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD---- 540
++ + L+ +Y + SL FD R + ++ A G+ +LH +
Sbjct: 71 KDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 126
Query: 541 -SRLRIIHRDLKASNVLLDAAMNPKISDFGMA--RIFGGDQIEENTNRVVGTYGYMAPEY 597
+ I HRDLK+ N+L+ I+D G+A D I+ N VGT YMAPE
Sbjct: 127 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 186
Query: 598 A-----MEGLFSTK-SDVYSFGVLLLEI 619
M+ S K +D+Y+ G++ EI
Sbjct: 187 LDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y VL + +A+K+LSR + E+ L+ + H+N++S+L
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 485 GCCIEEQEKMLIYEYLPNKSL----DVYIFDE--------AKRSLLDWSKRFEIICGIAR 532
+ P K+L DVY+ E + LD + ++ +
Sbjct: 84 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 131
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
GI +LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRY-Y 185
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
APE + + D++S G ++ E++ R F WN V
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKV 231
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y VL + +A+K+LSR + E+ L+ + H+N++S+L
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 485 GCCIEEQEKMLIYEYLPNKSL----DVYIFDE--------AKRSLLDWSKRFEIICGIAR 532
+ P K+L DVY+ E + LD + ++ +
Sbjct: 91 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 138
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
GI +LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRY-Y 192
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
APE + + D++S G ++ E++ R F WN V
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKV 238
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 25/208 (12%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
+G+G FG V++G + G+E+AVK S R E EI L+H N++ +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 106
Query: 489 EEQ----EKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD---- 540
++ + L+ +Y + SL FD R + ++ A G+ +LH +
Sbjct: 107 KDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 162
Query: 541 -SRLRIIHRDLKASNVLLDAAMNPKISDFGMA--RIFGGDQIEENTNRVVGTYGYMAPEY 597
+ I HRDLK+ N+L+ I+D G+A D I+ N VGT YMAPE
Sbjct: 163 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 222
Query: 598 AMEGL----FST--KSDVYSFGVLLLEI 619
+ + F + ++D+Y+ G++ EI
Sbjct: 223 LDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 37/236 (15%)
Query: 402 SRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSV---YKGVLQNGKEIAVKRLSRSS 458
S+R++ + V + + + +G G G V Y +L+ + +A+K+LSR
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPF 61
Query: 459 GQGIEEFKT--EIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSL----DVYIFDE 512
+ E+ L+ + H+N++ +L + P KSL DVYI E
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVME 109
Query: 513 --------AKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPK 564
+ LD + ++ + GI +LH IIHRDLK SN+++ + K
Sbjct: 110 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLK 166
Query: 565 ISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
I DFG+AR G + E VV Y Y APE + + D++S G ++ E++
Sbjct: 167 ILDFGLARTAGTSFMME--PEVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
+G+G FG V++G + G+E+AVK S R E EI L+H N++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 67
Query: 489 EEQ----EKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD---- 540
++ + L+ +Y + SL FD R + ++ A G+ +LH +
Sbjct: 68 KDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 123
Query: 541 -SRLRIIHRDLKASNVLLDAAMNPKISDFGMA--RIFGGDQIEENTNRVVGTYGYMAPEY 597
+ I HRDLK+ N+L+ I+D G+A D I+ N VGT YMAPE
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 183
Query: 598 A-----MEGLFSTK-SDVYSFGVLLLEI 619
M+ S K +D+Y+ G++ EI
Sbjct: 184 LDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y VL + +A+K+LSR + E+ L+ + H+N++S+L
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 485 GCCIEEQEKMLIYEYLPNKSL----DVYIFDE--------AKRSLLDWSKRFEIICGIAR 532
+ P K+L DVY+ E + LD + ++ +
Sbjct: 83 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 130
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
GI +LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRY-Y 184
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
APE + + D++S G ++ E++ R F WN V
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKV 230
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLS-RSSGQGIEEFKTEIALIAQLQHRNLVSILGCCI 488
+G+G FG V++G + G+E+AVK S R E EI L+H N++ +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 73
Query: 489 EEQ----EKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD---- 540
++ + L+ +Y + SL FD R + ++ A G+ +LH +
Sbjct: 74 KDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 129
Query: 541 -SRLRIIHRDLKASNVLLDAAMNPKISDFGMA--RIFGGDQIEENTNRVVGTYGYMAPEY 597
+ I HRDLK+ N+L+ I+D G+A D I+ N VGT YMAPE
Sbjct: 130 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 189
Query: 598 A-----MEGLFSTK-SDVYSFGVLLLEI 619
M+ S K +D+Y+ G++ EI
Sbjct: 190 LDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 37/236 (15%)
Query: 402 SRRNSEYLPVFDLSNIAAATNDFSSDNKLGEGGFGSV---YKGVLQNGKEIAVKRLSRSS 458
S+R++ + V + + + +G G G V Y +L+ + +A+K+LSR
Sbjct: 9 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPF 66
Query: 459 GQGIEEFKT--EIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSL----DVYIFDE 512
+ E+ L+ + H+N++ +L + P KSL DVYI E
Sbjct: 67 QNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVME 114
Query: 513 --------AKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPK 564
+ LD + ++ + GI +LH IIHRDLK SN+++ + K
Sbjct: 115 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLK 171
Query: 565 ISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
I DFG+AR G + T VV Y Y APE + + D++S G ++ E++
Sbjct: 172 ILDFGLARTAGTSFM--MTPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 429 KLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G FG V++ + G A K + E + EI ++ L+H LV++
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
++ E ++IYE++ L + DE + D + E + + +G+ ++H+++ +H
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHENN---YVH 278
Query: 548 RDLKASNVLLDAAMNP--KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFST 605
DLK N++ + K+ DFG+ Q + GT + APE A
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGY 335
Query: 606 KSDVYSFGVLLLEIILG 622
+D++S GVL ++ G
Sbjct: 336 YTDMWSVGVLSYILLSG 352
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 429 KLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G FG V++ + G A K + E + EI ++ L+H LV++
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
++ E ++IYE++ L + DE + D + E + + +G+ ++H+++ +H
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA--VEYMRQVCKGLCHMHENN---YVH 172
Query: 548 RDLKASNVLLDAAMNP--KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFST 605
DLK N++ + K+ DFG+ Q + GT + APE A
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGY 229
Query: 606 KSDVYSFGVLLLEIILG 622
+D++S GVL ++ G
Sbjct: 230 YTDMWSVGVLSYILLSG 246
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 423 DFSSDNKLGEGGFGSVYKGVLQNGKE-IAVKRLSRSSGQGIEE-FKTEIALIAQLQHRNL 480
DF D +G G FG + KE +AVK + R G I+E + EI L+H N+
Sbjct: 23 DFVKD--IGSGNFGVARLMRDKLTKELVAVKYIER--GAAIDENVQREIINHRSLRHPNI 78
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
V + +I EY L I + + S + RF + G+ Y H
Sbjct: 79 VRFKEVILTPTHLAIIMEYASGGELYERICNAGRFS--EDEARF-FFQQLLSGVSYCHS- 134
Query: 541 SRLRIIHRDLKASNVLLDAAMNP--KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
++I HRDLK N LLD + P KI DFG ++ + VGT Y+APE
Sbjct: 135 --MQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVL 189
Query: 599 MEGLFSTK-SDVYSFGVLLLEIILG 622
+ + K +DV+S GV L +++G
Sbjct: 190 LRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 37/208 (17%)
Query: 430 LGEGGFGSV---YKGVLQNGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHRNLVSIL 484
+G G G V Y +L+ + +A+K+LSR + E+ L+ + H+N++ +L
Sbjct: 26 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 485 GCCIEEQEKMLIYEYLPNKSL----DVYIFDE--------AKRSLLDWSKRFEIICGIAR 532
+ P KSL DVYI E + LD + ++ +
Sbjct: 84 NV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC 131
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
GI +LH IIHRDLK SN+++ + KI DFG+AR G + T VV Y Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRY-Y 185
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEII 620
APE + + D++S G ++ E++
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 430 LGEGGFGSVYKGVLQNGKE-IAVKRLSRSSGQGIEE-FKTEIALIAQLQHRNLVSILGCC 487
+G G FG + E +AVK + R G+ I+E K EI L+H N+V
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIER--GEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF--EIICGIARGILYLHQDSRLRI 545
+ ++ EY L I + A R D ++ F ++I G++ Y H +++
Sbjct: 85 LTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVS----YAHA---MQV 136
Query: 546 IHRDLKASNVLLDAAMNP--KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLF 603
HRDLK N LLD + P KI+DFG ++ + VGT Y+APE ++ +
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPAYIAPEVLLKKEY 193
Query: 604 STK-SDVYSFGVLLLEIILG 622
K +DV+S GV L +++G
Sbjct: 194 DGKVADVWSCGVTLYVMLVG 213
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 27/211 (12%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQ-HRNLVSILGCC 487
LGEG + V V LQNGKE AVK + + +G E+ + Q Q ++N++ ++
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
++ L++E L S+ +I K+ + + ++ +A + +LH I H
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHI---QKQKHFNEREASRVVRDVAAALDFLHTKG---IAH 134
Query: 548 RDLKASNVLLDA--AMNP-KISDFGMARIFGGDQIEENTNRVV--------GTYGYMAPE 596
RDLK N+L ++ ++P KI DF + G ++ + + G+ YMAPE
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDLG---SGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 597 YA-----MEGLFSTKSDVYSFGVLLLEIILG 622
+ + D++S GV+L ++ G
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVSILGCC 487
LG G F V + K +A+K +++ + +G E + EIA++ +++H N+V++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
LI + + L I ++ + D S+ +I + + YLH L I+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD---LGIVH 139
Query: 548 RDLKASNVL---LDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
RDLK N+L LD ISDFG++++ + + GT GY+APE + +S
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTACGTPGYVAPEVLAQKPYS 196
Query: 605 TKSDVYSFGVLLLEIILG 622
D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVSILGCC 487
LG G F V + K +A+K +++ + +G E + EIA++ +++H N+V++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
LI + + L I ++ + D S+ +I + + YLH L I+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD---LGIVH 139
Query: 548 RDLKASNVL---LDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
RDLK N+L LD ISDFG++++ + + GT GY+APE + +S
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTACGTPGYVAPEVLAQKPYS 196
Query: 605 TKSDVYSFGVLLLEIILG 622
D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 423 DFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRS---SGQGIEEFKTEIALIAQLQHR 478
DF+ LG+G FG V + E+ AVK L + +E E ++A
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 479 NLVSILGCCIEEQEKM-LIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYL 537
++ L C + +++ + EY+ L +Y + R IA G+ +L
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDL-MYHIQQVGR--FKEPHAVFYAAEIAIGLFFL 458
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEY 597
II+RDLK NV+LD+ + KI+DFGM + D + T GT Y+APE
Sbjct: 459 QSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGTPDYIAPEI 513
Query: 598 AMEGLFSTKSDVYSFGVLLLEIILGR 623
+ D ++FGVLL E++ G+
Sbjct: 514 IAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 430 LGEGGFGSVYK----GVLQNGKEIAVKRLSRS----SGQGIEEFKTEIALIAQLQHRNLV 481
LG+GG+G V++ GK A+K L ++ + + K E ++ +++H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
++ + LI EYL L + + E + ++ + F + I+ + +LHQ
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACF-YLAEISMALGHLHQKG 141
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN--TNRVVGTYGYMAPEYAM 599
II+RDLK N++L+ + K++DFG+ + + I + T+ GT YMAPE M
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCK----ESIHDGTVTHXFCGTIEYMAPEILM 194
Query: 600 EGLFSTKSDVYSFGVLLLEIILG 622
+ D +S G L+ +++ G
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 430 LGEGGFGSVYK----GVLQNGKEIAVKRLSRS----SGQGIEEFKTEIALIAQLQHRNLV 481
LG+GG+G V++ GK A+K L ++ + + K E ++ +++H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
++ + LI EYL L + + E + ++ + F + I+ + +LHQ
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACF-YLAEISMALGHLHQKG 141
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN--TNRVVGTYGYMAPEYAM 599
II+RDLK N++L+ + K++DFG+ + + I + T+ GT YMAPE M
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCK----ESIHDGTVTHTFCGTIEYMAPEILM 194
Query: 600 EGLFSTKSDVYSFGVLLLEIILG 622
+ D +S G L+ +++ G
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTG 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVSILGCC 487
LG G F V + K +A+K +++ + +G E + EIA++ +++H N+V++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
LI + + L I ++ + D S+ +I + + YLH L I+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD---LGIVH 139
Query: 548 RDLKASNVL---LDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
RDLK N+L LD ISDFG++++ + + GT GY+APE + +S
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTACGTPGYVAPEVLAQKPYS 196
Query: 605 TKSDVYSFGVLLLEIILG 622
D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 427 DNKLGEGGFGSVYKGVLQNGK------EIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
D ++G G F +VYKG+ E+ ++L++S Q FK E + LQH N+
Sbjct: 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQ---RFKEEAEXLKGLQHPNI 87
Query: 481 VSILGC---------CIEEQEKMLIYEYLPNKSLDVYI--FDEAK-RSLLDWSKRFEIIC 528
V CI +L+ E + +L Y+ F K + L W ++
Sbjct: 88 VRFYDSWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ----- 137
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNP-KISDFGMARIFGGDQIEENTNRVV 587
I +G+ +LH + IIHRDLK N+ + KI D G+A + + V+
Sbjct: 138 -ILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVI 191
Query: 588 GTYGYMAPEYAMEGLFSTKSDVYSFGVLLLE 618
GT + APE E + DVY+FG LE
Sbjct: 192 GTPEFXAPE-XYEEKYDESVDVYAFGXCXLE 221
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 20/237 (8%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLS--RSSGQGIEEFKTEIALIAQLQH 477
T+++ +LG+G F V + + + G+E A K ++ + S + ++ + E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 478 RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYL 537
N+V + EE L+++ + L I S D S I I + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILESVNHC 119
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMN---PKISDFGMARIFGGDQIEENTNRVVGTYGYMA 594
H + I+HRDLK N+LL + K++DFG+A GDQ + GT GY++
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ--QAWFGFAGTPGYLS 174
Query: 595 PEYAMEGLFSTKSDVYSFGVLLLEIILG------RRNNTFHLEQGSGSWNLVGHVWD 645
PE + + D+++ GV+L +++G + + + +G+++ WD
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD 231
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 109/237 (45%), Gaps = 20/237 (8%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLS--RSSGQGIEEFKTEIALIAQLQH 477
T+++ +LG+G F V + + + G+E A K ++ + S + ++ + E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 478 RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYL 537
N+V + EE L+++ + L D R + I I + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMN---PKISDFGMARIFGGDQIEENTNRVVGTYGYMA 594
H + I+HRDLK N+LL + K++DFG+A GDQ + GT GY++
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ--QAWFGFAGTPGYLS 174
Query: 595 PEYAMEGLFSTKSDVYSFGVLLLEIILG------RRNNTFHLEQGSGSWNLVGHVWD 645
PE + + D+++ GV+L +++G + + + +G+++ WD
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD 231
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVSILGCC 487
LG G F V + K +A+K +++ + +G E + EIA++ +++H N+V++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIH 547
LI + + L I ++ + D S+ +I + + YLH L I+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD---LGIVH 139
Query: 548 RDLKASNVL---LDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
RDLK N+L LD ISDFG++++ + + GT GY+APE + +S
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTACGTPGYVAPEVLAQKPYS 196
Query: 605 TKSDVYSFGVLLLEIILG 622
D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 463 EEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSL---DVYIF--DEAKRSL 517
++FK E+ +I +++ ++ G E +IYEY+ N S+ D Y F D+
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 518 LDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGD 577
+ II + Y+H + I HRD+K SN+L+D K+SDFG +
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205
Query: 578 QIEENTNRVVGTYGYMAPE-YAMEGLFS-TKSDVYSFGVLL 616
+I+ + GTY +M PE ++ E ++ K D++S G+ L
Sbjct: 206 KIKGSR----GTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 24/200 (12%)
Query: 429 KLGEGGFGSVYKGVLQ-NGKEIAVK-----RLSRSSGQGI--EEFKTEIALIAQLQHRNL 480
+LG G F V K + GKE A K RLS SS +G+ EE + E+ ++ +++H N+
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLS-SSRRGVSREEIEREVNILREIRHPNI 70
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
+++ + + +LI E + L ++ A++ L + + + I G+ YLH
Sbjct: 71 ITLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYLHSK 127
Query: 541 SRLRIIHRDLKASNV-LLDAAM-NPKIS--DFGMA-RIFGGDQIEENTNRVVGTYGYMAP 595
RI H DLK N+ LLD + NP+I DFG+A +I G++ + + GT ++AP
Sbjct: 128 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK----NIFGTPEFVAP 180
Query: 596 EYAMEGLFSTKSDVYSFGVL 615
E ++D++S GV+
Sbjct: 181 EIVNYEPLGLEADMWSIGVI 200
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 430 LGEGGFG-SVYKGVLQNGKEIAVKRLSRSSGQGIEE-FKTEIALIAQLQHRNLVSILGCC 487
+G G FG + Q+ + +AVK + R G+ I+E K EI L+H N+V
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIER--GEKIDENVKREIINHRSLRHPNIVRFKEVI 83
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF--EIICGIARGILYLHQDSRLRI 545
+ ++ EY L I + A R D ++ F ++I G++ Y H +++
Sbjct: 84 LTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVS----YCHA---MQV 135
Query: 546 IHRDLKASNVLLDAAMNP--KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLF 603
HRDLK N LLD + P KI DFG ++ + VGT Y+APE ++ +
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEY 192
Query: 604 STK-SDVYSFGVLLLEIILG 622
K +DV+S GV L +++G
Sbjct: 193 DGKVADVWSCGVTLYVMLVG 212
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 419 AATNDFSSDNKLGEGGFGSVYKGVLQNGKE----IAVKRLSRSSGQGIEEFKTEIA--LI 472
A + F LG+G FG V+ +G + A+K L +++ + + +T++ ++
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 473 AQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIAR 532
++ H +V + E + LI ++L L + E + D +F + +A
Sbjct: 81 VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV--KF-YLAELAL 137
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
+ +LH L II+RDLK N+LLD + K++DFG+++ E+ GT Y
Sbjct: 138 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEY 192
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
MAPE + +D +SFGVL+ E++ G
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 22/199 (11%)
Query: 429 KLGEGGFGSVYKGVLQ-NGKEIAVKRLSR----SSGQGI--EEFKTEIALIAQLQHRNLV 481
+LG G F V K + GKE A K + + SS +G+ EE + E+ ++ +++H N++
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
++ + + +LI E + L ++ A++ L + + + I G+ YLH
Sbjct: 79 TLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYLHSK- 134
Query: 542 RLRIIHRDLKASNV-LLDAAM-NPKIS--DFGMA-RIFGGDQIEENTNRVVGTYGYMAPE 596
RI H DLK N+ LLD + NP+I DFG+A +I G++ + + GT ++APE
Sbjct: 135 --RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK----NIFGTPEFVAPE 188
Query: 597 YAMEGLFSTKSDVYSFGVL 615
++D++S GV+
Sbjct: 189 IVNYEPLGLEADMWSIGVI 207
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 19/212 (8%)
Query: 430 LGEGGFGSVYKGVL-QNGKEIAVKRLSR--SSGQGIEEFKTEIALIAQLQHRNLVSILGC 486
+G G +G+V V + G ++A+K+L R S + E+ L+ ++H N++ +L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 487 CIEEQ---EKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRL 543
++ + Y +P D+ K L + ++ + +G+ Y+H
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKL--MKHEKLGEDRIQFLVYQMLKGLRYIHAAG-- 148
Query: 544 RIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLF 603
IIHRDLK N+ ++ KI DFG+AR Q + V T Y APE + +
Sbjct: 149 -IIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAPEVILNWMR 202
Query: 604 STKS-DVYSFGVLLLEIILGRR--NNTFHLEQ 632
T++ D++S G ++ E+I G+ + HL+Q
Sbjct: 203 YTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ 234
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 26/230 (11%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKR--------LSRSSGQGIEEFKTEIALIAQLQHRNLV 481
LGEG +G V K VL + E +R R G K EI L+ +L+H+N++
Sbjct: 13 LGEGSYGKV-KEVLDS--ETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 482 SILGCCI-EEQEKM-LIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQ 539
++ EE++KM ++ EY + + D + C + G+ YLH
Sbjct: 70 QLVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS 127
Query: 540 DSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA- 598
I+H+D+K N+LL KIS G+A ++ G+ + PE A
Sbjct: 128 QG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIAN 184
Query: 599 -MEGLFSTKSDVYSFGVLLLEIILG----RRNNTFHLEQ--GSGSWNLVG 641
++ K D++S GV L I G +N + L + G GS+ + G
Sbjct: 185 GLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPG 234
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 22/199 (11%)
Query: 429 KLGEGGFGSVYKGVLQ-NGKEIAVKRLSR----SSGQGI--EEFKTEIALIAQLQHRNLV 481
+LG G F V K + GKE A K + + SS +G+ EE + E+ ++ +++H N++
Sbjct: 33 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNII 92
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
++ + + +LI E + L ++ A++ L + + + I G+ YLH
Sbjct: 93 TLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYLHSK- 148
Query: 542 RLRIIHRDLKASNV-LLDAAM-NPKIS--DFGMA-RIFGGDQIEENTNRVVGTYGYMAPE 596
RI H DLK N+ LLD + NP+I DFG+A +I G++ + + GT ++APE
Sbjct: 149 --RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK----NIFGTPEFVAPE 202
Query: 597 YAMEGLFSTKSDVYSFGVL 615
++D++S GV+
Sbjct: 203 IVNYEPLGLEADMWSIGVI 221
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 22/216 (10%)
Query: 419 AATNDFSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQH 477
A ND + ++G G G V+K + G IAVK++ RS G E + + L L+
Sbjct: 22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS-GNKEENKRILMDLDVVLKS 80
Query: 478 RN---LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF--EIICGIAR 532
+ +V G I + + E + + + KR +R ++ I +
Sbjct: 81 HDCPYIVQCFGTFITNTDVFIAMELMGTCAEKL-----KKRMQGPIPERILGKMTVAIVK 135
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
+ YL + + +IHRD+K SN+LLD K+ DFG++ D+ + +R G Y
Sbjct: 136 ALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK---DRSAGCAAY 190
Query: 593 MAPEY-----AMEGLFSTKSDVYSFGVLLLEIILGR 623
MAPE + + ++DV+S G+ L+E+ G+
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 419 AATNDFSSDNKLGEGGFGSVYKGVLQNGKEI----AVKRLSRSSGQGIEEFKTEIA--LI 472
A + F LG+G FG V+ +G + A+K L +++ + + +T++ ++
Sbjct: 22 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 81
Query: 473 AQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIAR 532
++ H +V + E + LI ++L L + E + D +F + +A
Sbjct: 82 VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV--KF-YLAELAL 138
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
+ +LH L II+RDLK N+LLD + K++DFG+++ E+ GT Y
Sbjct: 139 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEY 193
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
MAPE + +D +SFGVL+ E++ G
Sbjct: 194 MAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 110
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDVYI-FDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 168
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNP-KISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 169 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY- 221
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 419 AATNDFSSDNKLGEGGFGSVYKGVLQNGKEI----AVKRLSRSSGQGIEEFKTEIA--LI 472
A + F LG+G FG V+ +G + A+K L +++ + + +T++ ++
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 473 AQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIAR 532
++ H +V + E + LI ++L L + E + D +F + +A
Sbjct: 81 VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV--KF-YLAELAL 137
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
+ +LH L II+RDLK N+LLD + K++DFG+++ E+ GT Y
Sbjct: 138 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEY 192
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
MAPE + +D +SFGVL+ E++ G
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 112
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 170
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNP-KISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 171 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY- 223
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 104
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 162
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNP-KISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 163 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY- 215
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 430 LGEGGFGSVYK----GVLQNGKEIAVKRLSRSS----GQGIEEFKTEIALIAQLQHRNLV 481
LG G +G V+ GK A+K L +++ + E +TE ++ ++ +
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 482 SILGCCIEEQEKM-LIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---EIICGIARGILYL 537
L + + K+ LI +Y+ L + L +RF E+ + +L L
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTH---------LSQRERFTEHEVQIYVGEIVLAL 172
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEY 597
+L II+RD+K N+LLD+ + ++DFG+++ F D+ E + GT YMAP+
Sbjct: 173 EHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD-FCGTIEYMAPDI 231
Query: 598 AMEGL--FSTKSDVYSFGVLLLEIILG 622
G D +S GVL+ E++ G
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 110
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 168
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNP-KISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 169 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY- 221
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 114
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 172
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAAMNP-KISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 173 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY- 225
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 13/207 (6%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRS---SGQGIEEFKTEIALIAQLQH 477
DF+ LG+G FG V + E+ AVK L + +E E ++A
Sbjct: 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 79
Query: 478 RNLVSILGCCIEEQEKM-LIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILY 536
++ L C + +++ + EY+ L +Y + R IA G+ +
Sbjct: 80 PPFLTQLHSCFQTMDRLYFVMEYVNGGDL-MYHIQQVGR--FKEPHAVFYAAEIAIGLFF 136
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPE 596
L II+RDLK NV+LD+ + KI+DFGM + D + T GT Y+APE
Sbjct: 137 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGTPDYIAPE 191
Query: 597 YAMEGLFSTKSDVYSFGVLLLEIILGR 623
+ D ++FGVLL E++ G+
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 155
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 213
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDA-AMNPKISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 214 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY- 266
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 95
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 153
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDA-AMNPKISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 154 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY- 206
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 84
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 142
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDA-AMNPKISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 143 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY- 195
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 81
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 139
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDA-AMNPKISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 140 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY- 192
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 88
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 146
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDA-AMNPKISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 147 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY- 199
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 88
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 146
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDA-AMNPKISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 147 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY- 199
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 80
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 138
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDA-AMNPKISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 139 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY- 191
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 13/212 (6%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHR 478
+++ +G G +G V + G+++A+K++ + +T E+ ++ +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 479 NLVSI---LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
N+++I L + E +Y L D++ + + L R+ + + RG+
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRY-FLYQLLRGLK 173
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN--TNRVVGTYGYM 593
Y+H ++IHRDLK SN+L++ KI DFGMAR E V T Y
Sbjct: 174 YMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 230
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGRR 624
APE + ++ D++S G + E++ R+
Sbjct: 231 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 76
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDA-AMNPKISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY- 187
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 76
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDA-AMNPKISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY- 187
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 89
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 147
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDA-AMNPKISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 148 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY- 200
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 76
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDA-AMNPKISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY- 187
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
++ +G G FG VY+ L +G+ +A+K++ QG E+ ++ +L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVR 77
Query: 483 ILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARGI 534
+ EK L+ +Y+P V + AK++L + + K + + + R +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSL 135
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDA-AMNPKISDFGMAR-IFGGDQIEENTNRVVGTYGY 592
Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y Y
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY-Y 188
Query: 593 MAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
APE +++ DV+S G +L E++LG+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
++ +G G FG VY+ L +G+ +A+K++ QG E+ ++ +L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVR 77
Query: 483 ILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARGI 534
+ EK L+ +Y+P V + AK++L + + K + + + R +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSL 135
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDA-AMNPKISDFGMAR-IFGGDQIEENTNRVVGTYGY 592
Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y Y
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY-Y 188
Query: 593 MAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
APE +++ DV+S G +L E++LG+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 77
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 135
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDA-AMNPKISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 136 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY- 188
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVS 482
++ +G G FG VY+ L +G+ +A+K++ QG E+ ++ +L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVR 77
Query: 483 ILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARGI 534
+ EK L+ +Y+P V + AK++L + + K + + + R +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSL 135
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDA-AMNPKISDFGMAR-IFGGDQIEENTNRVVGTYGY 592
Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y Y
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSXICSRY-Y 188
Query: 593 MAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
APE +++ DV+S G +L E++LG+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 24/201 (11%)
Query: 428 NKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQHRNL 480
+LG G F V K L+ + KR SR+S +G+ EE + E++++ Q+ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
+++ + +LI E + L ++ A++ L + I I G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 541 SRLRIIHRDLKASNVLLDAAMNP----KISDFGMARIFGGDQIEENT--NRVVGTYGYMA 594
+I H DLK N++L P K+ DFG+A +IE+ + GT ++A
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-----EIEDGVEFKNIFGTPEFVA 186
Query: 595 PEYAMEGLFSTKSDVYSFGVL 615
PE ++D++S GV+
Sbjct: 187 PEIVNYEPLGLEADMWSIGVI 207
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 24/201 (11%)
Query: 428 NKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQHRNL 480
+LG G F V K L+ + KR SR+S +G+ EE + E++++ Q+ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
+++ + +LI E + L ++ A++ L + I I G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 541 SRLRIIHRDLKASNVLLDAAMNP----KISDFGMARIFGGDQIEENT--NRVVGTYGYMA 594
+I H DLK N++L P K+ DFG+A +IE+ + GT ++A
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-----EIEDGVEFKNIFGTPEFVA 186
Query: 595 PEYAMEGLFSTKSDVYSFGVL 615
PE ++D++S GV+
Sbjct: 187 PEIVNYEPLGLEADMWSIGVI 207
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 429 KLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQHRNLV 481
+LG G F V K L+ + KR SR+S +G+ EE + E++++ Q+ H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
++ + +LI E + L ++ A++ L + I I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 542 RLRIIHRDLKASNVLLDAAMNP----KISDFGMARIFGGDQIEENT--NRVVGTYGYMAP 595
+I H DLK N++L P K+ DFG+A +IE+ + GT ++AP
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-----EIEDGVEFKNIFGTPEFVAP 187
Query: 596 EYAMEGLFSTKSDVYSFGVL 615
E ++D++S GV+
Sbjct: 188 EIVNYEPLGLEADMWSIGVI 207
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVL-QNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLV 481
++ +G G FG VY+ L +G+ +A+K++ + + FK E+ ++ +L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 76
Query: 482 SILGCCIEEQEKM------LIYEYLPNKSLDV-YIFDEAKRSL-LDWSKRFEIICGIARG 533
+ EK L+ +Y+P V + AK++L + + K + + + R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDA-AMNPKISDFGMAR-IFGGDQIEENTNRVVGTYG 591
+ Y+H I HRD+K N+LLD K+ DFG A+ + G E N + + Y
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRY- 187
Query: 592 YMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
Y APE +++ DV+S G +L E++LG+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 24/221 (10%)
Query: 416 NIAAATNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQ 474
N +D +LG G +G V K + +G+ AVKR+ R++ E+ + L
Sbjct: 28 NFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRI-RATVNSQEQKRLLXDL--D 84
Query: 475 LQHRNL-----VSILGCCIEEQEKMLIYEYLPNKSLDVY---IFDEAKRSLLDWSKRFEI 526
+ R + V+ G E + + E L + SLD + + D+ + D + I
Sbjct: 85 ISXRTVDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGK--I 141
Query: 527 ICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRV 586
I + + +LH S+L +IHRD+K SNVL++A K DFG++ + D + ++ +
Sbjct: 142 AVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISG-YLVDDVAKDID-- 196
Query: 587 VGTYGYMAPEYAMEGL----FSTKSDVYSFGVLLLEIILGR 623
G Y APE L +S KSD++S G+ +E+ + R
Sbjct: 197 AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILR 237
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 429 KLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQHRNLV 481
+LG G F V K L+ + KR SR+S +G+ EE + E++++ Q+ H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
++ + +LI E + L ++ A++ L + I I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 542 RLRIIHRDLKASNVLLDAAMNP----KISDFGMARIFGGDQIEENT--NRVVGTYGYMAP 595
+I H DLK N++L P K+ DFG+A +IE+ + GT ++AP
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-----EIEDGVEFKNIFGTPEFVAP 187
Query: 596 EYAMEGLFSTKSDVYSFGVL 615
E ++D++S GV+
Sbjct: 188 EIVNYEPLGLEADMWSIGVI 207
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 24/201 (11%)
Query: 428 NKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQHRNL 480
+LG G F V K L+ + KR SR+S +G+ EE + E++++ Q+ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
+++ + +LI E + L ++ A++ L + I I G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 541 SRLRIIHRDLKASNVLLDAAMNP----KISDFGMARIFGGDQIEENT--NRVVGTYGYMA 594
+I H DLK N++L P K+ DFG+A +IE+ + GT ++A
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-----EIEDGVEFKNIFGTPEFVA 186
Query: 595 PEYAMEGLFSTKSDVYSFGVL 615
PE ++D++S GV+
Sbjct: 187 PEIVNYEPLGLEADMWSIGVI 207
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 24/201 (11%)
Query: 428 NKLGEGGFGSVYK-----GVLQNGKEIAVKRLSRSSGQGI--EEFKTEIALIAQLQHRNL 480
+LG G F V K L+ + KR SR+S +G+ EE + E++++ Q+ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
+++ + +LI E + L ++ A++ L + I I G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 541 SRLRIIHRDLKASNVLLDAAMNP----KISDFGMARIFGGDQIEENT--NRVVGTYGYMA 594
+I H DLK N++L P K+ DFG+A +IE+ + GT ++A
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-----EIEDGVEFKNIFGTPEFVA 186
Query: 595 PEYAMEGLFSTKSDVYSFGVL 615
PE ++D++S GV+
Sbjct: 187 PEIVNYEPLGLEADMWSIGVI 207
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 111/233 (47%), Gaps = 30/233 (12%)
Query: 410 PVFDLSNIAAAT---NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLS----RSSGQG 461
P +L + AAA + + +G G V + V + G E AVK + R S +
Sbjct: 79 PEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQ 138
Query: 462 IEEFKT----EIALIAQLQ-HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRS 516
+EE + E ++ Q+ H ++++++ L+++ + L Y+ ++
Sbjct: 139 LEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---TEKV 195
Query: 517 LLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMA-RIFG 575
L + I+ + + +LH ++ I+HRDLK N+LLD M ++SDFG + +
Sbjct: 196 ALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEP 252
Query: 576 GDQIEENTNRVVGTYGYMAPEYAMEGL------FSTKSDVYSFGVLLLEIILG 622
G+++ E + GT GY+APE + + + D+++ GV+L ++ G
Sbjct: 253 GEKLRE----LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 14/213 (6%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEEFKT--EIALIAQLQHR 478
+++ +G G +G V + G+++A+K++ + +T E+ ++ +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 479 NLVSI---LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
N+++I L + E +Y L D++ + + L R+ + + RG+
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRY-FLYQLLRGLK 172
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEEN--TNRVVGTYGYM 593
Y+H ++IHRDLK SN+L++ KI DFGMAR E V T Y
Sbjct: 173 YMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 229
Query: 594 APEYAME-GLFSTKSDVYSFGVLLLEIILGRRN 625
APE + ++ D++S G + E +L RR
Sbjct: 230 APELMLSLHEYTQAIDLWSVGCIFGE-MLARRQ 261
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 13/191 (6%)
Query: 429 KLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
+LG G FG V++ V + G+ K ++ K EI+++ QL H L+++
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 488 IEEQEKMLIYEYLPNKSL-DVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRII 546
++ E +LI E+L L D ++ K S + C G+ ++H+ S I+
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQAC---EGLKHMHEHS---IV 171
Query: 547 HRDLKASNVLLDA--AMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLFS 604
H D+K N++ + A + KI DFG+A D+I + T T + APE
Sbjct: 172 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREPVG 228
Query: 605 TKSDVYSFGVL 615
+D+++ GVL
Sbjct: 229 FYTDMWAIGVL 239
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVK-----RLSRSSGQGIEEFKTEIALIAQLQHRNLVSI 483
+G+G F V + + + G++ AVK + + S G E+ K E ++ L+H ++V +
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 484 LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL----YLHQ 539
L + +++E++ L F+ KR+ + + R IL Y H
Sbjct: 94 LETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 150
Query: 540 DSRLRIIHRDLKASNVLLDAAMNP---KISDFGMARIFGGDQIEENTNRVVGTYGYMAPE 596
++ IIHRD+K VLL + N K+ FG+A G + VGT +MAPE
Sbjct: 151 NN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPE 205
Query: 597 YAMEGLFSTKSDVYSFGVLLLEIILG 622
+ DV+ GV+L ++ G
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVK-----RLSRSSGQGIEEFKTEIALIAQLQHRNLVSI 483
+G+G F V + + + G++ AVK + + S G E+ K E ++ L+H ++V +
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 484 LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL----YLHQ 539
L + +++E++ L F+ KR+ + + R IL Y H
Sbjct: 92 LETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 540 DSRLRIIHRDLKASNVLLDAAMNP---KISDFGMARIFGGDQIEENTNRVVGTYGYMAPE 596
++ IIHRD+K VLL + N K+ FG+A G + VGT +MAPE
Sbjct: 149 NN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPE 203
Query: 597 YAMEGLFSTKSDVYSFGVLLLEIILG 622
+ DV+ GV+L ++ G
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 104/269 (38%), Gaps = 74/269 (27%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQ-GIEEFKTEIALIAQLQHRN 479
DF +G GGFG V++ + + A+KR+ + + E+ E+ +A+L+H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 480 LVSILGCCIEE-----QEKMLIYEYLPNKSLD---------------------------- 506
+V +E QE+M +L ++S D
Sbjct: 66 IVRYFNAWLETPPEKWQEEMDEI-WLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTV 124
Query: 507 ---------VYIFDEA----KRSLLDWSKR------------FEIICGIARGILYLHQDS 541
VY++ + K +L DW R I IA + +LH
Sbjct: 125 GQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG 184
Query: 542 RLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENT----------NRVVGTYG 591
++HRDLK SN+ K+ DFG+ D+ E+ VGT
Sbjct: 185 ---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKL 241
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEII 620
YM+PE +S K D++S G++L E++
Sbjct: 242 YMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 430 LGEGGFG-SVYKGVLQNGKEIAVKRLSRSSGQGIEE-FKTEIALIAQLQHRNLVSILGCC 487
+G G FG + Q+ + +AVK + R G+ I+E K EI L+H N+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER--GEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF--EIICGIARGILYLHQDSRLRI 545
+ ++ EY L I + A R D ++ F ++I G++ Y H +++
Sbjct: 85 LTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVS----YCHA---MQV 136
Query: 546 IHRDLKASNVLLDAAMNP--KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLF 603
HRDLK N LLD + P KI FG ++ + VGT Y+APE ++ +
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEY 193
Query: 604 STK-SDVYSFGVLLLEIILG 622
K +DV+S GV L +++G
Sbjct: 194 DGKVADVWSCGVTLYVMLVG 213
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 430 LGEGGFG-SVYKGVLQNGKEIAVKRLSRSSGQGIE-EFKTEIALIAQLQHRNLVSILGCC 487
+G G FG + Q+ + +AVK + R G+ I K EI L+H N+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER--GEKIAANVKREIINHRSLRHPNIVRFKEVI 84
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF--EIICGIARGILYLHQDSRLRI 545
+ ++ EY L I + A R D ++ F ++I G++ Y H +++
Sbjct: 85 LTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVS----YCHA---MQV 136
Query: 546 IHRDLKASNVLLDAAMNP--KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLF 603
HRDLK N LLD + P KI DFG ++ + VGT Y+APE ++ +
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEY 193
Query: 604 STK-SDVYSFGVLLLEIILG 622
K +DV+S GV L +++G
Sbjct: 194 DGKVADVWSCGVTLYVMLVG 213
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 426 SDNKLGEGGFGSVYKGVLQN-GKEIAVKRLS-RSSGQGIE-EFKTEIALIAQLQHRNLVS 482
+ +LG G F V + + ++ G+E A K L R GQ E EIA++ + V
Sbjct: 33 TSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVI 92
Query: 483 ILGCCIEE-QEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
L E E +LI EY + E ++ + +I I G+ YLHQ++
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFSLCLPELAE-MVSENDVIRLIKQILEGVYYLHQNN 151
Query: 542 RLRIIHRDLKASNVLLDAAM---NPKISDFGMARIFGGD-QIEENTNRVVGTYGYMAPEY 597
I+H DLK N+LL + + KI DFGM+R G ++ E ++GT Y+APE
Sbjct: 152 ---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELRE----IMGTPEYLAPEI 204
Query: 598 AMEGLFSTKSDVYSFGVL 615
+T +D+++ G++
Sbjct: 205 LNYDPITTATDMWNIGII 222
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 32/209 (15%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKT-EIALIAQLQHRNLVSILGCCI 488
+G G FG V++ L E+A+K++ + + FK E+ ++ ++H N+V +
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 489 EEQEKM------LIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIIC------GIARGILY 536
+K L+ EY+P VY A R + ++ + R + Y
Sbjct: 103 SNGDKKDEVFLNLVLEYVPET---VY---RASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNP-KISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
+H + I HRD+K N+LLD K+ DFG A+I E N + + Y Y AP
Sbjct: 157 IHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG--EPNVSXICSRY-YRAP 210
Query: 596 EYAMEGL-FSTKSDVYSFGVLLLEIILGR 623
E ++T D++S G ++ E++ G+
Sbjct: 211 ELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVLQNGKEI-AVK--RLSRSSGQGIEEFKTEIALIAQLQHRN- 479
+S ++G GG V++ VL K+I A+K L + Q ++ ++ EIA + +LQ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 480 -LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
++ + I +Q IY + ++D+ + + K+S+ W ++ + + +H
Sbjct: 117 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIH 172
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
Q I+H DLK +N L+ M K+ DFG+A D + VGT YM PE A
Sbjct: 173 QHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-A 227
Query: 599 MEGLFSTKS------------DVYSFGVLLLEIILGR 623
++ + S++ DV+S G +L + G+
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 430 LGEGGFG-SVYKGVLQNGKEIAVKRLSRSSGQGIEE-FKTEIALIAQLQHRNLVSILGCC 487
+G G FG + Q+ + +AVK + R G+ I+E K EI L+H N+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER--GEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 488 IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF--EIICGIARGILYLHQDSRLRI 545
+ ++ EY L I + A R D ++ F ++I G++ Y H +++
Sbjct: 85 LTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVS----YCHA---MQV 136
Query: 546 IHRDLKASNVLLDAAMNP--KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEGLF 603
HRDLK N LLD + P KI FG ++ + VGT Y+APE ++ +
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYIAPEVLLKKEY 193
Query: 604 STK-SDVYSFGVLLLEIILG 622
K +DV+S GV L +++G
Sbjct: 194 DGKVADVWSCGVTLYVMLVG 213
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVLQNGKEI-AVK--RLSRSSGQGIEEFKTEIALIAQLQHRN- 479
+S ++G GG V++ VL K+I A+K L + Q ++ ++ EIA + +LQ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 480 -LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
++ + I +Q IY + ++D+ + + K+S+ W ++ + + +H
Sbjct: 117 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIH 172
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
Q I+H DLK +N L+ M K+ DFG+A D + VGT YM PE A
Sbjct: 173 QHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-A 227
Query: 599 MEGLFSTKS------------DVYSFGVLLLEIILGR 623
++ + S++ DV+S G +L + G+
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVLQNGKEI-AVK--RLSRSSGQGIEEFKTEIALIAQLQHRN- 479
+S ++G GG V++ VL K+I A+K L + Q ++ ++ EIA + +LQ +
Sbjct: 14 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 480 -LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
++ + I +Q IY + ++D+ + + K+S+ W ++ + + +H
Sbjct: 73 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIH 128
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
Q I+H DLK +N L+ M K+ DFG+A D + VGT YM PE A
Sbjct: 129 QHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-A 183
Query: 599 MEGLFSTKS------------DVYSFGVLLLEIILGR 623
++ + S++ DV+S G +L + G+
Sbjct: 184 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVLQNGKEI-AVK--RLSRSSGQGIEEFKTEIALIAQLQHRN- 479
+S ++G GG V++ VL K+I A+K L + Q ++ ++ EIA + +LQ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 480 -LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
++ + I +Q IY + ++D+ + + K+S+ W ++ + + +H
Sbjct: 89 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIH 144
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
Q I+H DLK +N L+ M K+ DFG+A D + VGT YM PE A
Sbjct: 145 QHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-A 199
Query: 599 MEGLFSTKS------------DVYSFGVLLLEIILGR 623
++ + S++ DV+S G +L + G+
Sbjct: 200 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVLQNGKEI-AVK--RLSRSSGQGIEEFKTEIALIAQLQHRN- 479
+S ++G GG V++ VL K+I A+K L + Q ++ ++ EIA + +LQ +
Sbjct: 11 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 480 -LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
++ + I +Q IY + ++D+ + + K+S+ W ++ + + +H
Sbjct: 70 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIH 125
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
Q I+H DLK +N L+ M K+ DFG+A D + VGT YM PE A
Sbjct: 126 QHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-A 180
Query: 599 MEGLFSTKS------------DVYSFGVLLLEIILGR 623
++ + S++ DV+S G +L + G+
Sbjct: 181 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVLQNGKEI-AVK--RLSRSSGQGIEEFKTEIALIAQLQHRN- 479
+S ++G GG V++ VL K+I A+K L + Q ++ ++ EIA + +LQ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 480 -LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
++ + I +Q IY + ++D+ + + K+S+ W ++ + + +H
Sbjct: 89 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIH 144
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
Q I+H DLK +N L+ M K+ DFG+A D + VGT YM PE A
Sbjct: 145 QHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPE-A 199
Query: 599 MEGLFSTKS------------DVYSFGVLLLEIILGR 623
++ + S++ DV+S G +L + G+
Sbjct: 200 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVLQNGKEI-AVK--RLSRSSGQGIEEFKTEIALIAQLQHRN- 479
+S ++G GG V++ VL K+I A+K L + Q ++ ++ EIA + +LQ +
Sbjct: 10 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 480 -LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
++ + I +Q IY + ++D+ + + K+S+ W ++ + + +H
Sbjct: 69 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIH 124
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
Q I+H DLK +N L+ M K+ DFG+A D + VGT YM PE A
Sbjct: 125 QHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-A 179
Query: 599 MEGLFSTKS------------DVYSFGVLLLEIILGR 623
++ + S++ DV+S G +L + G+
Sbjct: 180 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 45/270 (16%)
Query: 419 AATNDFSSDNKLGEGGFGSVYKGVLQNG-KEIAVKRLSRSS---GQGIE-----EFKTEI 469
A +++ LG G G V + K++A+K +S+ G E +TEI
Sbjct: 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF-EIIC 528
++ +L H ++ I + ++ ++ E + L FD+ + +KR E C
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDK-----VVGNKRLKEATC 116
Query: 529 GI-----ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNP---KISDFGMARIFGGDQIE 580
+ + YLH++ IIHRDLK NVLL + KI+DFG ++I G +
Sbjct: 117 KLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 172
Query: 581 ENTNRVVGTYGYMAPEYAME---GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQ----- 632
+ GT Y+APE + ++ D +S GV+L + G + H Q
Sbjct: 173 --MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 230
Query: 633 --GSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
SG +N + VW E A++ V K L
Sbjct: 231 QITSGKYNFIPEVWAEVSE-KALDLVKKLL 259
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 45/270 (16%)
Query: 419 AATNDFSSDNKLGEGGFGSVYKGVLQNG-KEIAVKRLSRSS---GQGIE-----EFKTEI 469
A +++ LG G G V + K++A+K +S+ G E +TEI
Sbjct: 6 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 65
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF-EIIC 528
++ +L H ++ I + ++ ++ E + L FD+ + +KR E C
Sbjct: 66 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDK-----VVGNKRLKEATC 115
Query: 529 GI-----ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNP---KISDFGMARIFGGDQIE 580
+ + YLH++ IIHRDLK NVLL + KI+DFG ++I G +
Sbjct: 116 KLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 171
Query: 581 ENTNRVVGTYGYMAPEYAME---GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQ----- 632
+ GT Y+APE + ++ D +S GV+L + G + H Q
Sbjct: 172 --MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 229
Query: 633 --GSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
SG +N + VW E A++ V K L
Sbjct: 230 QITSGKYNFIPEVWAEVSE-KALDLVKKLL 258
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 45/270 (16%)
Query: 419 AATNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSS---GQGIEE-----FKTEI 469
A +++ LG G G V + K++A+K +S+ G E +TEI
Sbjct: 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF-EIIC 528
++ +L H ++ I + ++ ++ E + L FD+ + +KR E C
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDK-----VVGNKRLKEATC 116
Query: 529 GI-----ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNP---KISDFGMARIFGGDQIE 580
+ + YLH++ IIHRDLK NVLL + KI+DFG ++I G +
Sbjct: 117 KLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 172
Query: 581 ENTNRVVGTYGYMAPEYAME---GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQ----- 632
+ GT Y+APE + ++ D +S GV+L + G + H Q
Sbjct: 173 --MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 230
Query: 633 --GSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
SG +N + VW E A++ V K L
Sbjct: 231 QITSGKYNFIPEVWAEVSE-KALDLVKKLL 259
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 45/270 (16%)
Query: 419 AATNDFSSDNKLGEGGFGSVYKGVLQNG-KEIAVKRLSRSS---GQGIEE-----FKTEI 469
A +++ LG G G V + K++A+K +S+ G E +TEI
Sbjct: 13 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 72
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF-EIIC 528
++ +L H ++ I + ++ ++ E + L FD+ + +KR E C
Sbjct: 73 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDK-----VVGNKRLKEATC 122
Query: 529 GI-----ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNP---KISDFGMARIFGGDQIE 580
+ + YLH++ IIHRDLK NVLL + KI+DFG ++I G +
Sbjct: 123 KLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 178
Query: 581 ENTNRVVGTYGYMAPEYAME---GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQ----- 632
+ GT Y+APE + ++ D +S GV+L + G + H Q
Sbjct: 179 --MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 236
Query: 633 --GSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
SG +N + VW E A++ V K L
Sbjct: 237 QITSGKYNFIPEVWAEVSE-KALDLVKKLL 265
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 45/270 (16%)
Query: 419 AATNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSS---GQGIE-----EFKTEI 469
A +++ LG G G V + K++A+K +S+ G E +TEI
Sbjct: 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF-EIIC 528
++ +L H ++ I + ++ ++ E + L FD+ + +KR E C
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDK-----VVGNKRLKEATC 116
Query: 529 GI-----ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNP---KISDFGMARIFGGDQIE 580
+ + YLH++ IIHRDLK NVLL + KI+DFG ++I G +
Sbjct: 117 KLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 172
Query: 581 ENTNRVVGTYGYMAPEYAME---GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQ----- 632
+ GT Y+APE + ++ D +S GV+L + G + H Q
Sbjct: 173 --MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 230
Query: 633 --GSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
SG +N + VW E A++ V K L
Sbjct: 231 QITSGKYNFIPEVWAEVSE-KALDLVKKLL 259
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 104/219 (47%), Gaps = 32/219 (14%)
Query: 423 DFSSDNKLGEGGFGSVYKGVLQ--------NGKEIAVKRLSRSSGQGIEEFKTEIALIAQ 474
D + LG+G F ++KGV + + E+ +K L ++ E F +++++
Sbjct: 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSK 68
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
L H++LV G C+ E +L+ E++ SLD Y+ + ++ ++ + E+ +A +
Sbjct: 69 LSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAAAM 126
Query: 535 LYLHQDSRLRIIHRDLKASNVLL-----DAAMNP---KISDFGMA-RIFGGDQIEENTNR 585
+L +++ +IH ++ A N+LL NP K+SD G++ + D ++E
Sbjct: 127 HFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPW 183
Query: 586 VVGTYGYMAPEYAMEGL--FSTKSDVYSFGVLLLEIILG 622
V P +E + +D +SFG L EI G
Sbjct: 184 V--------PPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 117/270 (43%), Gaps = 45/270 (16%)
Query: 419 AATNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSS---GQGIE-----EFKTEI 469
A +++ LG G G V + K++A++ +S+ G E +TEI
Sbjct: 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEI 191
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF-EIIC 528
++ +L H ++ I + ++ ++ E + L FD+ + +KR E C
Sbjct: 192 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDK-----VVGNKRLKEATC 241
Query: 529 GI-----ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNP---KISDFGMARIFGGDQIE 580
+ + YLH++ IIHRDLK NVLL + KI+DFG ++I G +
Sbjct: 242 KLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 297
Query: 581 ENTNRVVGTYGYMAPEYAME---GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQ----- 632
+ GT Y+APE + ++ D +S GV+L + G + H Q
Sbjct: 298 --MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 355
Query: 633 --GSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
SG +N + VW E A++ V K L
Sbjct: 356 QITSGKYNFIPEVWAEVSE-KALDLVKKLL 384
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 422 NDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
+D+ KLG G + V++ + + N +++ VK L I K EI ++ L+
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKI---KREIKILENLRGGPN 93
Query: 481 VSILGCCIEE---QEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYL 537
+ L +++ + L++E++ N F + ++L D+ RF + I + + Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTD-----FKQLYQTLTDYDIRF-YMYEILKALDYC 147
Query: 538 HQDSRLRIIHRDLKASNVLLDAAMNP-KISDFGMARIFGGDQIEENTNRVVGTYGYMAPE 596
H + I+HRD+K NV++D ++ D+G+A + Q E RV Y + PE
Sbjct: 148 HS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRY-FKGPE 201
Query: 597 YAME-GLFSTKSDVYSFGVLLLEIILGRRNNTFH 629
++ ++ D++S G +L +I R+ FH
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIF-RKEPFFH 234
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 430 LGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSI----- 483
LG GG G V+ V + K +A+K++ + Q ++ EI +I +L H N+V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 484 ---------LGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
+G E ++ EY+ +V + LL+ R + + RG+
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL----EQGPLLEEHARL-FMYQLLRGL 133
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAA-MNPKISDFGMARIFGGDQIEE-NTNRVVGTYGY 592
Y+H + ++HRDLK +N+ ++ + KI DFG+ARI + + + + T Y
Sbjct: 134 KYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWY 190
Query: 593 MAPEYAMEGLFSTKS-DVYSFGVLLLEIILGR 623
+P + TK+ D+++ G + E++ G+
Sbjct: 191 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 117/270 (43%), Gaps = 45/270 (16%)
Query: 419 AATNDFSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSS---GQGIE-----EFKTEI 469
A +++ LG G G V + K++A++ +S+ G E +TEI
Sbjct: 146 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEI 205
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF-EIIC 528
++ +L H ++ I + ++ ++ E + L FD+ + +KR E C
Sbjct: 206 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDK-----VVGNKRLKEATC 255
Query: 529 GI-----ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNP---KISDFGMARIFGGDQIE 580
+ + YLH++ IIHRDLK NVLL + KI+DFG ++I G +
Sbjct: 256 KLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 311
Query: 581 ENTNRVVGTYGYMAPEYAME---GLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQ----- 632
+ GT Y+APE + ++ D +S GV+L + G + H Q
Sbjct: 312 --MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 369
Query: 633 --GSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
SG +N + VW E A++ V K L
Sbjct: 370 QITSGKYNFIPEVWAEVSE-KALDLVKKLL 398
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 18/199 (9%)
Query: 430 LGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCIE 489
LG G FG V++ V + K+ + + + G K EI+++ +HRN++ +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 490 EQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIIC---GIARGILYLHQDSRLRII 546
+E ++I+E++ LD IF+ S + ++R EI+ + + +LH + I
Sbjct: 73 MEELVMIFEFISG--LD--IFERINTSAFELNER-EIVSYVHQVCEALQFLHSHN---IG 124
Query: 547 HRDLKASNVLLDAAMNP--KISDFGMARIFG-GDQIEENTNRVVGTYGYMAPEYAMEGLF 603
H D++ N++ + KI +FG AR GD N + Y APE +
Sbjct: 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----NFRLLFTAPEYYAPEVHQHDVV 180
Query: 604 STKSDVYSFGVLLLEIILG 622
ST +D++S G L+ ++ G
Sbjct: 181 STATDMWSLGTLVYVLLSG 199
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVY-KGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQH 477
A + F LG G FG V ++ G A+K L + ++E + + LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 478 RN---LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
N LV + + ++ EY P + F +R + RF I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+++D K++DFG+A+ +++ T + GT Y
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEY 204
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 429 KLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTE-IALIAQLQHRNLVSILGC 486
+LG G FG V++ Q G + AVK++ +E F+ E + A L +V + G
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVPLYGA 134
Query: 487 CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRII 546
E + E L SL + ++ L + + G+ YLH SR RI+
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLVKEQG---CLPEDRALYYLGQALEGLEYLH--SR-RIL 188
Query: 547 HRDLKASNVLLDA-AMNPKISDFGMARIFGGDQIEENT---NRVVGTYGYMAPEYAMEGL 602
H D+KA NVLL + + + DFG A D + ++ + + GT +MAPE +
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 603 FSTKSDVYSFGVLLLEIILG 622
K DV+S ++L ++ G
Sbjct: 249 CDAKVDVWSSCCMMLHMLNG 268
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 429 KLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTE-IALIAQLQHRNLVSILGC 486
+LG G FG V++ Q G + AVK++ +E F+ E + A L +V + G
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVPLYGA 153
Query: 487 CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRII 546
E + E L SL + ++ L + + G+ YLH SR RI+
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLVKEQG---CLPEDRALYYLGQALEGLEYLH--SR-RIL 207
Query: 547 HRDLKASNVLLDA-AMNPKISDFGMARIFGGDQIEENT---NRVVGTYGYMAPEYAMEGL 602
H D+KA NVLL + + + DFG A D + ++ + + GT +MAPE +
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS 267
Query: 603 FSTKSDVYSFGVLLLEIILG 622
K DV+S ++L ++ G
Sbjct: 268 CDAKVDVWSSCCMMLHMLNG 287
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 423 DFSSDN---KLGEGGFGSVYKGVLQNGKEIAVKRLSRS--SGQGIEEFKTEIALIAQLQH 477
DF N KL E G ++KG Q G +I VK L S + +F E + H
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 478 RNLVSILGCC--IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
N++ +LG C LI ++P SL + E ++D S+ + +ARG+
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSL-YNVLHEGTNFVVDQSQAVKFALDMARGMA 125
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
+LH L I L + +V++D M +IS + F ++ R+ ++AP
Sbjct: 126 FLHTLEPL-IPRHALNSRSVMIDEDMTARISMADVKFSF------QSPGRMYAP-AWVAP 177
Query: 596 EYAMEGLFST---KSDVYSFGVLLLEII 620
E + T +D++SF VLL E++
Sbjct: 178 EALQKKPEDTNRRSADMWSFAVLLWELV 205
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 424 FSSDNKLGEGGFGSVYKGVLQNGKEI-AVK--RLSRSSGQGIEEFKTEIALIAQLQHRN- 479
+S ++G GG V++ VL K+I A+K L + Q ++ ++ EIA + +LQ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 480 -LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
++ + I +Q IY + ++D+ + + K+S+ W ++ + + +H
Sbjct: 117 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIH 172
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYA 598
Q I+H DLK +N L+ M K+ DFG+A D + VG YM PE A
Sbjct: 173 QHG---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPE-A 227
Query: 599 MEGLFSTKS------------DVYSFGVLLLEIILGR 623
++ + S++ DV+S G +L + G+
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V ++ G A+K L + + IE E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARF-YAAQIVL 152
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT Y
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F +G G FG V ++ G A+K L + + IE E ++
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D K++DFG A+ +++ T + GT Y
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEY 204
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F +G G FG V ++ G A+K L + + IE E ++
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D K++DFG A+ +++ T + GT Y
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEY 204
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 18/205 (8%)
Query: 424 FSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTE-IALIAQLQHRNLV 481
+ +LG G FG V++ Q G + AVK++ +E F+ E + A L +V
Sbjct: 74 MTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIV 127
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+ G E + E L SL I + L + + G+ YLH
Sbjct: 128 PLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR- 183
Query: 542 RLRIIHRDLKASNVLLDA-AMNPKISDFGMARIFGGDQIEENT---NRVVGTYGYMAPEY 597
RI+H D+KA NVLL + + DFG A D + ++ + + GT +MAPE
Sbjct: 184 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 241
Query: 598 AMEGLFSTKSDVYSFGVLLLEIILG 622
M K D++S ++L ++ G
Sbjct: 242 VMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V ++ G A+K L + + IE E ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARF-YAAQIVL 153
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT Y
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 103/219 (47%), Gaps = 32/219 (14%)
Query: 423 DFSSDNKLGEGGFGSVYKGVLQ--------NGKEIAVKRLSRSSGQGIEEFKTEIALIAQ 474
D + LG+G F ++KGV + + E+ +K L ++ E F +++++
Sbjct: 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSK 68
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
L H++LV G C E +L+ E++ SLD Y+ + ++ ++ + E+ +A +
Sbjct: 69 LSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAWAM 126
Query: 535 LYLHQDSRLRIIHRDLKASNVLL-----DAAMNP---KISDFGMA-RIFGGDQIEENTNR 585
+L +++ +IH ++ A N+LL NP K+SD G++ + D ++E
Sbjct: 127 HFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPW 183
Query: 586 VVGTYGYMAPEYAMEGL--FSTKSDVYSFGVLLLEIILG 622
V P +E + +D +SFG L EI G
Sbjct: 184 V--------PPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVY-KGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V ++ G A+K L + + IE E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARF-YAAQIVL 152
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT Y
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F +G G FG V ++ G A+K L + + IE E ++
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D K++DFG A+ +++ T + GT Y
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEY 204
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 27/193 (13%)
Query: 447 KEIAVKRLSRSSG-----QGIEEFK----TEIALIAQLQ-HRNLVSILGCCIEEQEKMLI 496
KE AVK + + G + ++E + E+ ++ ++ H N++ + L+
Sbjct: 43 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 497 YEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVL 556
++ + L Y+ ++ S + K I+ + I LH +L I+HRDLK N+L
Sbjct: 103 FDLMKKGELFDYLTEKVTLSEKETRK---IMRALLEVICALH---KLNIVHRDLKPENIL 156
Query: 557 LDAAMNPKISDFGMA-RIFGGDQIEENTNRVVGTYGYMAPEYAMEGL------FSTKSDV 609
LD MN K++DFG + ++ G+++ E V GT Y+APE + + + D+
Sbjct: 157 LDDDMNIKLTDFGFSCQLDPGEKLRE----VCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212
Query: 610 YSFGVLLLEIILG 622
+S GV++ ++ G
Sbjct: 213 WSTGVIMYTLLAG 225
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 32/163 (19%)
Query: 496 IYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNV 555
+++YL K V + ++ R ++ E+IC + +L I+HRDLK N+
Sbjct: 98 LFDYLTEK---VTLSEKETRKIM--RALLEVICAL----------HKLNIVHRDLKPENI 142
Query: 556 LLDAAMNPKISDFGMA-RIFGGDQIEENTNRVVGTYGYMAPEYAMEGL------FSTKSD 608
LLD MN K++DFG + ++ G+++ E V GT Y+APE + + + D
Sbjct: 143 LLDDDMNIKLTDFGFSCQLDPGEKLRE----VCGTPSYLAPEIIECSMNDNHPGYGKEVD 198
Query: 609 VYSFGVLLLEIILG-----RRNNTFHLEQ-GSGSWNLVGHVWD 645
++S GV++ ++ G R L SG++ WD
Sbjct: 199 MWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD 241
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVY-KGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V ++ G A+K L + + IE E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY P + F +R + RF I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARF-YAAQIVL 152
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+++D K++DFG A+ +++ T + GT Y
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V ++ G A+K L + + IE E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT Y
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V ++ G A+K L + + IE E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT Y
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 19/211 (9%)
Query: 418 AAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIA 473
A + F LG G FG V ++ G A+K L + + IE E ++
Sbjct: 23 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 82
Query: 474 QLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIA 531
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 83 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIV 137
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT
Sbjct: 138 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPE 189
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 190 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V ++ G A+K L + + IE E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT Y
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 427 DNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQ-HRNLVSIL 484
++ LGEG V + L +E AVK + + G E+ ++ Q Q HRN++ ++
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
EE L++E + S+ +I KR + + ++ +A + +LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIH---KRRHFNELEASVVVQDVASALDFLHNKG--- 131
Query: 545 IIHRDLKASNVLLDAA--MNP-KISDFGMAR--IFGGDQIEENTNRVV---GTYGYMAPE 596
I HRDLK N+L + ++P KI DFG+ GD +T ++ G+ YMAPE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 597 ----YAMEG-LFSTKSDVYSFGVLLLEIILG 622
++ E ++ + D++S GV+L ++ G
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V ++ G A+K L + + IE E ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 153
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT Y
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVY-KGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V ++ G A+K L + + IE E ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 153
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT Y
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEY 205
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 18/205 (8%)
Query: 424 FSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTE-IALIAQLQHRNLV 481
+ ++G G FG V++ Q G + AVK++ +E F+ E + A L +V
Sbjct: 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIV 113
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+ G E + E L SL I + L + + G+ YLH
Sbjct: 114 PLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR- 169
Query: 542 RLRIIHRDLKASNVLLDA-AMNPKISDFGMARIFGGDQIEENT---NRVVGTYGYMAPEY 597
RI+H D+KA NVLL + + DFG A D + ++ + + GT +MAPE
Sbjct: 170 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227
Query: 598 AMEGLFSTKSDVYSFGVLLLEIILG 622
M K D++S ++L ++ G
Sbjct: 228 VMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 428 NKLGEGGFGSV--YKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILG 485
KLGEGGF V +G L +G A+KR+ Q EE + E + H N++ ++
Sbjct: 35 QKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 486 CCIEEQ----EKMLIYEYLPNKSLDVYIFDEAKR-----SLLDWSKRFEIICGIARGILY 536
C+ E+ E L+ + +L ++E +R + L + ++ GI RG+
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTL----WNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 537 LHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMA-----RIFGGDQIEENTNRVVG--T 589
+H HRDLK +N+LL P + D G + G Q + T
Sbjct: 150 IHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 590 YGYMAPEYAMEGLFSTKS--------DVYSFGVLLLEIILG 622
Y APE LFS +S DV+S G +L ++ G
Sbjct: 207 ISYRAPE-----LFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVY-KGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQH 477
A + F LG G FG V ++ G A+K L + ++E + + LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 478 RN---LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
N LV + + ++ EY P + F +R + RF I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+++D +++DFG+A+ +++ T + GT Y
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEY 204
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVY-KGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V ++ G A+K L + + IE E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY P + F +R + RF I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+++D K++DFG A+ +++ T + GT Y
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 39/233 (16%)
Query: 448 EIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEY-----LPN 502
E AVK + +S EE + L+ QH N++++ + + L+ E L +
Sbjct: 54 EYAVKVIDKSKRDPSEEIEI---LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLD 110
Query: 503 KSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVL-LDAAM 561
K L F E + S ++ I + + YLH ++HRDLK SN+L +D +
Sbjct: 111 KILRQKFFSEREASF--------VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESG 159
Query: 562 NP---KISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTKSDVYSFGVLL 616
NP +I DFG A+ EN + Y ++APE + D++S G+LL
Sbjct: 160 NPECLRICDFGFAKQLRA----ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILL 215
Query: 617 LEIILGR---------RNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
++ G GSG + L G W+ E TA + V K L
Sbjct: 216 YTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSE-TAKDLVSKML 267
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 25/247 (10%)
Query: 414 LSNIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQG-----------I 462
++ + A + ++ + G +G+V GV G +A+KR+ + G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 463 EEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSL--DVYIFDEAKRSLLDW 520
+ EI L+ H N++ + + +E + YL + + D+ +R ++
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 521 SKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIE 580
+ I G+ LH+ ++HRDL N+LL + I DF +AR D +
Sbjct: 134 QHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---EDTAD 187
Query: 581 ENTNRVVGTYGYMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNL 639
N V Y APE M+ F+ D++S G ++ E+ N L +GS +N
Sbjct: 188 ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-----NRKALFRGSTFYNQ 242
Query: 640 VGHVWDL 646
+ + ++
Sbjct: 243 LNKIVEV 249
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 39/233 (16%)
Query: 448 EIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEY-----LPN 502
E AVK + +S EE + L+ QH N++++ + + L+ E L +
Sbjct: 54 EYAVKVIDKSKRDPSEEIEI---LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLD 110
Query: 503 KSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVL-LDAAM 561
K L F E + S ++ I + + YLH ++HRDLK SN+L +D +
Sbjct: 111 KILRQKFFSEREASF--------VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESG 159
Query: 562 NP---KISDFGMARIFGGDQIEENTNRVVGTY--GYMAPEYAMEGLFSTKSDVYSFGVLL 616
NP +I DFG A+ EN + Y ++APE + D++S G+LL
Sbjct: 160 NPECLRICDFGFAKQLRA----ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILL 215
Query: 617 LEIILGR---------RNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSL 660
++ G GSG + L G W+ E TA + V K L
Sbjct: 216 YTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSE-TAKDLVSKML 267
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 25/247 (10%)
Query: 414 LSNIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEIAVKRLSRSSGQG-----------I 462
++ + A + ++ + G +G+V GV G +A+KR+ + G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 463 EEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSL--DVYIFDEAKRSLLDW 520
+ EI L+ H N++ + + +E + YL + + D+ +R ++
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 521 SKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIE 580
+ I G+ LH+ ++HRDL N+LL + I DF +AR D +
Sbjct: 134 QHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---EDTAD 187
Query: 581 ENTNRVVGTYGYMAPEYAMEGL-FSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNL 639
N V Y APE M+ F+ D++S G ++ E+ N L +GS +N
Sbjct: 188 ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-----NRKALFRGSTFYNQ 242
Query: 640 VGHVWDL 646
+ + ++
Sbjct: 243 LNKIVEV 249
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 58/245 (23%)
Query: 430 LGEGGFGSVYKGVLQNGKEI-AVKRLSRS-----SGQGIEEFKTEIALIAQLQHRNLVSI 483
+G+G +G V + + I A+K ++++ + + +E KTE+ L+ +L H N+ +
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 484 LGCCIEEQEKMLIYE-----YLPNKSLDVYIFDEAK------------------------ 514
+EQ L+ E +L +K L+V+I D
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDK-LNVFIDDSTGKCAMDVVKTQICPCPECNEEAING 152
Query: 515 -----RSLLDWSKRFEIICGIARGIL----YLHQDSRLRIIHRDLKASNVLL--DAAMNP 563
R LD+ +R ++I I R I YLH I HRD+K N L + +
Sbjct: 153 SIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEI 209
Query: 564 KISDFGMARIF----GGDQIEENTNRVVGTYGYMAPEY--AMEGLFSTKSDVYSFGVLLL 617
K+ DFG+++ F G+ T GT ++APE + K D +S GVLL
Sbjct: 210 KLVDFGLSKEFYKLNNGEYYGMTTK--AGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLH 267
Query: 618 EIILG 622
+++G
Sbjct: 268 LLLMG 272
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 18/205 (8%)
Query: 424 FSSDNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTE-IALIAQLQHRNLV 481
+ ++G G FG V++ Q G + AVK++ +E F+ E + A L +V
Sbjct: 76 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIV 129
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
+ G E + E L SL I + L + + G+ YLH
Sbjct: 130 PLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR- 185
Query: 542 RLRIIHRDLKASNVLLDA-AMNPKISDFGMARIFGGDQIEENT---NRVVGTYGYMAPEY 597
RI+H D+KA NVLL + + DFG A D + ++ + + GT +MAPE
Sbjct: 186 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
Query: 598 AMEGLFSTKSDVYSFGVLLLEIILG 622
M K D++S ++L ++ G
Sbjct: 244 VMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 19/211 (9%)
Query: 418 AAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIA 473
A + F LG G FG V + G A+K L + + IE E ++
Sbjct: 30 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 89
Query: 474 QLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIA 531
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARF-YAAQIV 144
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT
Sbjct: 145 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPE 196
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 422 NDFSSDNKLGEGGFGSVYK-GVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNL 480
F ++LG G +G V+K ++G+ AVKR S S +G ++ ++A + +
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKDRARKLAEVGSHEK--- 112
Query: 481 VSILGCCI------EEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGI 534
V CC+ EE + + L SL + EA + L ++ + + +
Sbjct: 113 VGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHC--EAWGASLPEAQVWGYLRDTLLAL 170
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF---GGDQIEENTNRVVGTYG 591
+LH ++H D+K +N+ L K+ DFG+ G +++E R
Sbjct: 171 AHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR------ 221
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEI 619
YMAPE ++G + T +DV+S G+ +LE+
Sbjct: 222 YMAPEL-LQGSYGTAADVFSLGLTILEV 248
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 24/224 (10%)
Query: 413 DLSNIAAATNDFSSD----NKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSS--------G 459
+L +AA ++S + LG G FG V+ V + KE+ VK + +
Sbjct: 11 ELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIED 70
Query: 460 QGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLD 519
+ + EIA++++++H N++ +L + L+ E LD++ F + + LD
Sbjct: 71 PKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEK-HGSGLDLFAFID-RHPRLD 128
Query: 520 WSKRFEIICGIARGILYLHQDSRLR-IIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQ 578
I + + YL RL+ IIHRD+K N+++ K+ DFG A +
Sbjct: 129 EPLASYIFRQLVSAVGYL----RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK 184
Query: 579 IEENTNRVVGTYGYMAPEYAMEGLF-STKSDVYSFGVLLLEIIL 621
+ GT Y APE M + + +++S GV L ++
Sbjct: 185 L---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVF 225
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVY-KGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V + G A+K L + + IE E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT Y
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVY-KGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V + G A+K L + + IE E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT Y
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 32/257 (12%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNGK--EIAVKRLSRSSGQGIEEFKTEIALIAQLQHR 478
T+ + +G G + SV K + E AVK + +S EE + L+ QH
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI---LLRYGQHP 76
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
N++++ + + ++ E + L I ++ + ++ I + + YLH
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKIL---RQKFFSEREASAVLFTITKTVEYLH 133
Query: 539 QDSRLRIIHRDLKASNVL-LDAAMNP---KISDFGMARIFGGDQIEENTNRVVGTY--GY 592
++HRDLK SN+L +D + NP +I DFG A+ EN + Y +
Sbjct: 134 AQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA----ENGLLMTPCYTANF 186
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILGR---------RNNTFHLEQGSGSWNLVGHV 643
+APE + D++S GVLL ++ G GSG ++L G
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGY 246
Query: 644 WDLWKEGTAMEAVDKSL 660
W+ + TA + V K L
Sbjct: 247 WNSVSD-TAKDLVSKML 262
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVY-KGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQH 477
A + F LG G FG V ++ G A+K L + +++ + + LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 478 RNL--VSILGCCIEEQEKM-LIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
N ++ L ++ + ++ EY P + F +R + RF I
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARF-YAAQIVL 153
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+++D K++DFG A+ +++ T + GT Y
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVY-KGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V + G A+K L + + IE E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT Y
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 19/211 (9%)
Query: 418 AAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIA 473
A + F LG G FG V + G A+K L + + IE E ++
Sbjct: 30 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 89
Query: 474 QLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIA 531
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIV 144
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT
Sbjct: 145 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPE 196
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 22/206 (10%)
Query: 430 LGEGGFGSVYKG-VLQNGKEIAVKRLSRSSGQGIEEF------KTEIALIAQLQ----HR 478
LG+GGFG+V+ G L + ++A+K + R+ G E+AL+ ++ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
++ +L E QE ++ P + D++ + K L + R C + + +
Sbjct: 99 GVIRLLDW-FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSR----CFFGQVVAAIQ 153
Query: 539 QDSRLRIIHRDLKASNVLLDAAMN-PKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEY 597
++HRD+K N+L+D K+ DFG + +E GT Y PE+
Sbjct: 154 HCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH----DEPYTDFDGTRVYSPPEW 209
Query: 598 AMEGLF-STKSDVYSFGVLLLEIILG 622
+ + + V+S G+LL +++ G
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 94/193 (48%), Gaps = 27/193 (13%)
Query: 447 KEIAVKRLSRSSG-----QGIEEFK----TEIALIAQLQ-HRNLVSILGCCIEEQEKMLI 496
KE AVK + + G + ++E + E+ ++ ++ H N++ + L+
Sbjct: 43 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 497 YEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVL 556
++ + L Y+ ++ S + K I+ + I LH +L I+HRDLK N+L
Sbjct: 103 FDLMKKGELFDYLTEKVTLSEKETRK---IMRALLEVICALH---KLNIVHRDLKPENIL 156
Query: 557 LDAAMNPKISDFGMA-RIFGGDQIEENTNRVVGTYGYMAPEYAMEGL------FSTKSDV 609
LD MN K++DFG + ++ G+++ V GT Y+APE + + + D+
Sbjct: 157 LDDDMNIKLTDFGFSCQLDPGEKL----RSVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212
Query: 610 YSFGVLLLEIILG 622
+S GV++ ++ G
Sbjct: 213 WSTGVIMYTLLAG 225
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVY-KGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V + G A+K L + + IE E ++
Sbjct: 59 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 173
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT Y
Sbjct: 174 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 225
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVY-KGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V ++ G A+K L + + IE E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY P + F +R + RF I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+++D +++DFG A+ +++ T + GT Y
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V + G A+K L + + IE E ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 153
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT Y
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V + G A+K L + + IE E ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 153
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT Y
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V + G A+K L + + IE E ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+P + F +R + RF I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 153
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT Y
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVY-KGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQH 477
A + F LG G FG V ++ G A+K L + +++ + + LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 478 RNL--VSILGCCIEEQEKM-LIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
N ++ L ++ + ++ EY P + F +R + RF I
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 153
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+++D K++DFG A+ +++ T + GT Y
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVY-KGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQH 477
A + F LG G FG V ++ G A+K L + +++ + + LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 478 RNL--VSILGCCIEEQEKM-LIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
N ++ L ++ + ++ EY P + F +R + RF I
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 153
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+++D K++DFG A+ +++ T + GT Y
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 427 DNKLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQ-HRNLVSIL 484
++ LGEG V + L +E AVK + + G E+ ++ Q Q HRN++ ++
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
EE L++E + S+ +I KR + + ++ +A + +LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIH---KRRHFNELEASVVVQDVASALDFLHNKG--- 131
Query: 545 IIHRDLKASNVLLDAA--MNP-KISDF--GMARIFGGDQIEENTNRVV---GTYGYMAPE 596
I HRDLK N+L + ++P KI DF G GD +T ++ G+ YMAPE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 597 ----YAMEG-LFSTKSDVYSFGVLLLEIILG 622
++ E ++ + D++S GV+L ++ G
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSVY-KGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V + G A+K L + + IE E ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY P + F +R + RF I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 153
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+++D K++DFG A+ +++ T + GT Y
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEY 205
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 38/260 (14%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQNG--KEIAVKRLSRSSGQGIEEFKTEIALIAQLQHR 478
T+ + +G G + SV K + E AVK + +S EE + L+ QH
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEI---LLRYGQHP 76
Query: 479 NLVSILGCCIEEQEKMLIYEY-----LPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARG 533
N++++ + + ++ E L +K L F E + S ++ I +
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREAS--------AVLFTITKT 128
Query: 534 ILYLHQDSRLRIIHRDLKASNVL-LDAAMNP---KISDFGMARIFGGDQIEENTNRVVGT 589
+ YLH ++HRDLK SN+L +D + NP +I DFG A+ + T T
Sbjct: 129 VEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTP--CYT 183
Query: 590 YGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILGR---------RNNTFHLEQGSGSWNLV 640
++APE + D++S GVLL + G GSG ++L
Sbjct: 184 ANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLS 243
Query: 641 GHVWDLWKEGTAMEAVDKSL 660
G W+ + TA + V K L
Sbjct: 244 GGYWNSVSD-TAKDLVSKXL 262
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 110/241 (45%), Gaps = 30/241 (12%)
Query: 414 LSNIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSS--GQGIEEFKTEIA 470
+ + D+ +G G FG V + +++ A+K LS+ + F E
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEER 126
Query: 471 LIAQLQHRNLVSILGCCIEEQEKM-LIYEYLPNKSLDVYI--FDEAKRSLLDWSKRFEII 527
I + V L C ++ + + ++ EY+P L + +D ++ W+K +
Sbjct: 127 DIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK----WAKFY--- 179
Query: 528 CGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEE----NT 583
A +L L + +IHRD+K N+LLD + K++DFG +++E +
Sbjct: 180 --TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCM-----KMDETGMVHC 232
Query: 584 NRVVGTYGYMAPEYAM----EGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNL 639
+ VGT Y++PE +G + + D +S GV L E+++G + F+ + G+++
Sbjct: 233 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG--DTPFYADSLVGTYSK 290
Query: 640 V 640
+
Sbjct: 291 I 291
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 31/229 (13%)
Query: 416 NIAAATND--------FSSDNKLGEGGFGSVYKGVLQN-GKEIAVKRLSRSSGQGIEEFK 466
N AAA ++ F + G+G FG+V G ++ G +A+K++ + E +
Sbjct: 9 NAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQ 68
Query: 467 TEIALIAQLQHRNLVSILGC--CIEEQEKMLIY-----EYLPNK----SLDVYIFDEAKR 515
+ +A L H N+V + + E+++ IY EY+P+ + Y A
Sbjct: 69 I-MQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPP 127
Query: 516 SLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNP-KISDFGMARIF 574
+L F++I R I LH S + + HRD+K NVL++ A K+ DFG A+
Sbjct: 128 PILIKVFLFQLI----RSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL 182
Query: 575 GGDQIEENTNRVVGTYGYMAPEYAM-EGLFSTKSDVYSFGVLLLEIILG 622
E N + Y Y APE ++T D++S G + E++LG
Sbjct: 183 SPS--EPNVAYICSRY-YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 14/202 (6%)
Query: 426 SDNKLGEGGFGSVYKGVLQNGKE-IAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSIL 484
D LGEG F K V + + AVK +S+ ++ T + L H N+V +
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLH 72
Query: 485 GCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLR 544
++ L+ E L L I K+ ++ I+ + + ++H +
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERI---KKKKHFSETEASYIMRKLVSAVSHMHD---VG 126
Query: 545 IIHRDLKASNVLL---DAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAMEG 601
++HRDLK N+L + + KI DFG AR+ D T T Y APE +
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP--CFTLHYAAPELLNQN 184
Query: 602 LFSTKSDVYSFGVLLLEIILGR 623
+ D++S GV+L ++ G+
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQ 206
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 64/250 (25%)
Query: 430 LGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQGIE--EFKTEIALIAQLQHRNLVSILGC 486
+G G +G V + + K + A+K++ R I+ EIA++ +L H ++V +L
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 487 CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSL----LDWSKRFE------------IICGI 530
I + DV FDE L D+ K F ++ +
Sbjct: 121 VIPK---------------DVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNL 165
Query: 531 ARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIF-----GGDQI-----E 580
G+ Y+H I+HRDLK +N L++ + K+ DFG+AR G Q+ E
Sbjct: 166 LVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPRE 222
Query: 581 ENTNRV---------------VGTYGYMAPEYA-MEGLFSTKSDVYSFGVLLLEII-LGR 623
++ N V V T Y APE ++ ++ DV+S G + E++ + +
Sbjct: 223 DDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282
Query: 624 RNNTFHLEQG 633
N +H ++G
Sbjct: 283 ENVAYHADRG 292
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 58/253 (22%)
Query: 430 LGEGGFGSVYKGVLQNG-KEIAVKRLSRSSGQGIE--EFKTEIALIAQLQHRNLVSILGC 486
+G G +G VY +N K +A+K+++R I+ EI ++ +L+ ++ +
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 487 CIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFE------------IICGIARGI 534
I + +L ++ ++YI E S D K F+ I+ + G
Sbjct: 94 IIPDD--LLKFD-------ELYIVLEIADS--DLKKLFKTPIFLTEEHIKTILYNLLLGE 142
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQ-------IEEN----- 582
++H+ IIHRDLK +N LL+ + K+ DFG+AR ++ +EEN
Sbjct: 143 NFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP 199
Query: 583 ---------TNRVVGTYGYMAPEYAMEGLFSTKS-DVYSFGVLLLEII------LGRRNN 626
T+ VV T Y APE + TKS D++S G + E++ + N
Sbjct: 200 HNKNLKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258
Query: 627 TFHLEQGSGSWNL 639
F L GS + L
Sbjct: 259 RFPLFPGSSCFPL 271
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V + G A+K L + + IE E +
Sbjct: 39 AHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY P + F +R + RF I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 153
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D K++DFG A+ +++ T + GT Y
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEY 205
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 419 AATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIALIAQ 474
A + F LG G FG V ++ G A+K L + + IE E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIICGIAR 532
+ LV + + ++ EY+ + F +R + RF I
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVL 152
Query: 533 GILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGY 592
YLH L +I+RDLK N+L+D +++DFG A+ +++ T + GT Y
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEY 204
Query: 593 MAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
+APE + ++ D ++ GVL+ E+ G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVL----QNGKEIAVKRLSRSSGQGIEEFK---TEIALIAQ 474
NDF LG+G FG V +L G+ A+K L + +E TE ++
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---EIICGIA 531
+H L ++ + EY L ++ E R + RF EI+ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
YLH +++RD+K N++LD + KI+DFG+ + D T GT
Sbjct: 120 ----YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPE 170
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
Y+APE + + D + GV++ E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVL----QNGKEIAVKRLSRSSGQGIEEFK---TEIALIAQ 474
NDF LG+G FG V +L G+ A+K L + +E TE ++
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---EIICGIA 531
+H L ++ + EY L ++ E R + RF EI+ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
YLH +++RD+K N++LD + KI+DFG+ + D T GT
Sbjct: 120 ----YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPE 170
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
Y+APE + + D + GV++ E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVL----QNGKEIAVKRLSRSSGQGIEEFK---TEIALIAQ 474
NDF LG+G FG V +L G+ A+K L + +E TE ++
Sbjct: 8 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---EIICGIA 531
+H L ++ + EY L ++ E R + RF EI+ +
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 122
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
YLH +++RD+K N++LD + KI+DFG+ + D T GT
Sbjct: 123 ----YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPE 173
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
Y+APE + + D + GV++ E++ GR
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARF-YAA 148
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVL----QNGKEIAVKRLSRSSGQGIEEFK---TEIALIAQ 474
NDF LG+G FG V +L G+ A+K L + +E TE ++
Sbjct: 10 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---EIICGIA 531
+H L ++ + EY L ++ E R + RF EI+ +
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 124
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
YLH +++RD+K N++LD + KI+DFG+ + G GT
Sbjct: 125 ----YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPE 175
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
Y+APE + + D + GV++ E++ GR
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 113/271 (41%), Gaps = 60/271 (22%)
Query: 414 LSNIAAATNDFSSDNKLGEGGFGSVYKGVLQNG-KEIAVKRLSRSSGQGIE--EFKTEIA 470
+ N+ N + + +G G +G VY +N K +A+K+++R I+ EI
Sbjct: 21 IKNVKVPDN-YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREIT 79
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFE----- 525
++ +L+ ++ + I E +L ++ ++YI E S D K F+
Sbjct: 80 ILNRLKSDYIIRLHDLIIPED--LLKFD-------ELYIVLEIADS--DLKKLFKTPIFL 128
Query: 526 -------IICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQ 578
I+ + G ++H+ IIHRDLK +N LL+ + KI DFG+AR D+
Sbjct: 129 TEQHVKTILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDK 185
Query: 579 -----------------------IEENTNRVVGTYGYMAPEYA-MEGLFSTKSDVYSFGV 614
+++ V T Y APE ++ ++ D++S G
Sbjct: 186 DIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGC 245
Query: 615 LLLEII------LGRRNNTFHLEQGSGSWNL 639
+ E++ + N F L GS + L
Sbjct: 246 IFAELLNMMKSHINNPTNRFPLFPGSSCFPL 276
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 38/222 (17%)
Query: 428 NKLGEGGFGSVYKGVLQN--GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILG 485
+ LGEG FG V + + G+ +AVK + ++ + E ++EI ++ L + S
Sbjct: 20 DTLGEGAFGKVVECIDHKAGGRHVAVK-IVKNVDRYCEAARSEIQVLEHLNTTDPNSTFR 78
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSK-------RFEIICGIA----RGI 534
C +ML E+ + +F+ S D+ K R + I +A + +
Sbjct: 79 CV-----QML--EWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSV 131
Query: 535 LYLHQDSRLRIIHRDLKASNVLL-----DAAMNPKIS---------DFGMARIFGGDQIE 580
+LH + ++ H DLK N+L A NPKI D + +
Sbjct: 132 NFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 581 ENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
E+ + +V T Y APE + +S DV+S G +L+E LG
Sbjct: 189 EHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 29 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 88
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 89 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARF-YAA 143
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 144 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 195
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 196 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVL----QNGKEIAVKRLSRSSGQGIEEFK---TEIALIAQ 474
NDF LG+G FG V +L G+ A+K L + +E TE ++
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---EIICGIA 531
+H L ++ + EY L ++ E R + RF EI+ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
YLH +++RD+K N++LD + KI+DFG+ + G GT
Sbjct: 120 ----YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPE 170
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
Y+APE + + D + GV++ E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARF-YAA 148
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 55 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 114
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARF-YAA 169
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 170 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 221
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 17/209 (8%)
Query: 422 NDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSGQGIEEFK---TEIALIAQLQH 477
N+F LG+G FG V G+ A+K L + +E TE ++ +H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 478 RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---EIICGIARGI 534
L ++ + EY L ++ E R + RF EI+ +
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALD--- 262
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMA 594
YLH S +++RDLK N++LD + KI+DFG+ + G + GT Y+A
Sbjct: 263 -YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLA 317
Query: 595 PEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
PE + + D + GV++ E++ GR
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARF-YAA 148
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 122/290 (42%), Gaps = 64/290 (22%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGV--LQNGKE--IAVKRLSRSSGQGIEEFKTEIALIAQLQ 476
+N F ++K+GEG F SVY LQ G E IA+K L +S I + A+LQ
Sbjct: 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--------PIRIAAELQ 71
Query: 477 -------HRNLVSILGCCIEEQEKMLIYEYLPNKS-LDVYIFDEAKRSLLDWSKRFEIIC 528
N++ + C + ++ YL ++S LD+ + L + + E +
Sbjct: 72 CLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL-------NSLSFQEVREYML 124
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNP-KISDFGMARIFGGDQIE------- 580
+ + + +HQ I+HRD+K SN L + + + DFG+A+ +IE
Sbjct: 125 NLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQS 181
Query: 581 -------------------ENTNRVVGTYGYMAPEYAMEGLFSTKS-DVYSFGVLLLEII 620
+ GT G+ APE + T + D++S GV+ L ++
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241
Query: 621 LGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESC-CAPEI 669
GR + + S + + + ++A K+ G+S C+ E+
Sbjct: 242 SGR----YPFYKASDDLTALAQIMTIRGSRETIQAA-KTFGKSILCSKEV 286
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVL----QNGKEIAVKRLSRSSGQGIEEFK---TEIALIAQ 474
NDF LG+G FG V +L G+ A+K L + +E TE ++
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---EIICGIA 531
+H L ++ + EY L ++ E R + RF EI+ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
YLH +++RD+K N++LD + KI+DFG+ + G GT
Sbjct: 120 ----YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPE 170
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
Y+APE + + D + GV++ E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 24/212 (11%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVL----QNGKEIAVKRLSRSSGQGIEEFK---TEIALIAQ 474
NDF LG+G FG V +L G+ A+K L + +E TE ++
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---EIICGIA 531
+H L ++ + EY L ++ E R + RF EI+ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
YLH +++RD+K N++LD + KI+DFG+ + G GT
Sbjct: 120 ----YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPE 170
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
Y+APE + + D + GV++ E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 10/151 (6%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQ-HRNLVSILGCC 487
L EGGF VY+ + +G+E A+KRL + + E+ + +L H N+V
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 488 ---IEE----QEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
EE Q + L+ L L ++ R L +I R + ++H+
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ 155
Query: 541 SRLRIIHRDLKASNVLLDAAMNPKISDFGMA 571
+ IIHRDLK N+LL K+ DFG A
Sbjct: 156 -KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAA 148
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAG 200
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFAEPHARF-YAA 148
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 423 DFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQGIEE---FKTEIALIAQLQHR 478
DF +G G FG V ++N + I A+K L++ E F+ E ++ +
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 134
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
+ ++ +E L+ +Y L + + + + L + RF I +L +
Sbjct: 135 WITALHYAFQDENHLYLVMDYYVGGDL-LTLLSKFEDKLPEDMARFYI----GEMVLAID 189
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEY- 597
+L +HRD+K NVLLD + +++DFG D + ++ VGT Y++PE
Sbjct: 190 SIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQ-SSVAVGTPDYISPEIL 248
Query: 598 -AME---GLFSTKSDVYSFGVLLLEIILG 622
AME G + + D +S GV + E++ G
Sbjct: 249 QAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 17/209 (8%)
Query: 422 NDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSGQGIEEFK---TEIALIAQLQH 477
N+F LG+G FG V G+ A+K L + +E TE ++ +H
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 478 RNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---EIICGIARGI 534
L ++ + EY L ++ E R + RF EI+ +
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALD--- 265
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMA 594
YLH S +++RDLK N++LD + KI+DFG+ + G + GT Y+A
Sbjct: 266 -YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLA 320
Query: 595 PEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
PE + + D + GV++ E++ GR
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAA 148
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 109/237 (45%), Gaps = 22/237 (9%)
Query: 414 LSNIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQGIEE---FKTEI 469
+ ++ D+ +G G FG V ++ +++ A+K LS+ + F E
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI--FDEAKRSLLDWSKRFEII 527
++A +V + +++ ++ EY+P L + +D ++ W++ +
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK----WARFY--- 173
Query: 528 CGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVV 587
A +L L + IHRD+K N+LLD + + K++DFG + + + V
Sbjct: 174 --TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR-CDTAV 230
Query: 588 GTYGYMAPEYAM----EGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
GT Y++PE +G + + D +S GV L E+++G + F+ + G+++ +
Sbjct: 231 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG--DTPFYADSLVGTYSKI 285
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 423 DFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQGIEE---FKTEIALIAQLQHR 478
DF +G G FG V ++N + I A+K L++ E F+ E ++ +
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 150
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
+ ++ +E L+ +Y L + + + + L + RF I +L +
Sbjct: 151 WITALHYAFQDENHLYLVMDYYVGGDL-LTLLSKFEDKLPEDMARFYI----GEMVLAID 205
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEY- 597
+L +HRD+K NVLLD + +++DFG D + ++ VGT Y++PE
Sbjct: 206 SIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQ-SSVAVGTPDYISPEIL 264
Query: 598 -AME---GLFSTKSDVYSFGVLLLEIILG 622
AME G + + D +S GV + E++ G
Sbjct: 265 QAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 109/237 (45%), Gaps = 22/237 (9%)
Query: 414 LSNIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQGIEE---FKTEI 469
+ ++ D+ +G G FG V ++ +++ A+K LS+ + F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI--FDEAKRSLLDWSKRFEII 527
++A +V + +++ ++ EY+P L + +D ++ W++ +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK----WARFY--- 178
Query: 528 CGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVV 587
A +L L + IHRD+K N+LLD + + K++DFG + + + V
Sbjct: 179 --TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR-CDTAV 235
Query: 588 GTYGYMAPEYAM----EGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
GT Y++PE +G + + D +S GV L E+++G + F+ + G+++ +
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG--DTPFYADSLVGTYSKI 290
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 21 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 80
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 81 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAA 135
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 136 QIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCG 187
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 188 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 109/237 (45%), Gaps = 22/237 (9%)
Query: 414 LSNIAAATNDFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQGIEE---FKTEI 469
+ ++ D+ +G G FG V ++ +++ A+K LS+ + F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 470 ALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYI--FDEAKRSLLDWSKRFEII 527
++A +V + +++ ++ EY+P L + +D ++ W++ +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK----WARFY--- 178
Query: 528 CGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVV 587
A +L L + IHRD+K N+LLD + + K++DFG + + + V
Sbjct: 179 --TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR-CDTAV 235
Query: 588 GTYGYMAPEYAM----EGLFSTKSDVYSFGVLLLEIILGRRNNTFHLEQGSGSWNLV 640
GT Y++PE +G + + D +S GV L E+++G + F+ + G+++ +
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG--DTPFYADSLVGTYSKI 290
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVL----QNGKEIAVKRLSRSSGQGIEEFK---TEIALIAQ 474
N+F LG+G FG V +L G+ A+K L + +E TE ++
Sbjct: 10 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---EIICGIA 531
+H L ++ + EY L ++ E R + RF EI+ +
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALD 124
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
YLH S +++RDLK N++LD + KI+DFG+ + G + GT
Sbjct: 125 ----YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPE 176
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
Y+APE + + D + GV++ E++ GR
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAA 148
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXG 200
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAA 148
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAA 148
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVL----QNGKEIAVKRLSRSSGQGIEEFK---TEIALIAQ 474
N+F LG+G FG V +L G+ A+K L + +E TE ++
Sbjct: 9 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---EIICGIA 531
+H L ++ + EY L ++ E R + RF EI+ +
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALD 123
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
YLH S +++RDLK N++LD + KI+DFG+ + G + GT
Sbjct: 124 ----YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPE 175
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
Y+APE + + D + GV++ E++ GR
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAA 148
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 422 NDFSSDNKLGEGGFGSVYKGVL----QNGKEIAVKRLSRSSGQGIEEFK---TEIALIAQ 474
N+F LG+G FG V +L G+ A+K L + +E TE ++
Sbjct: 8 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 475 LQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRF---EIICGIA 531
+H L ++ + EY L ++ E R + RF EI+ +
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALD 122
Query: 532 RGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYG 591
YLH S +++RDLK N++LD + KI+DFG+ + G + GT
Sbjct: 123 ----YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPE 174
Query: 592 YMAPEYAMEGLFSTKSDVYSFGVLLLEIILGR 623
Y+APE + + D + GV++ E++ GR
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 34/222 (15%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEEFKT--EIALIAQL-Q 476
T +F K+G G FGSV+K V + +G A+KR + ++E E+ A L Q
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAK-RSLLDWSKRFEIICGIARGIL 535
H ++V E+ ++ EY SL I + + S ++ +++ + RG+
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNP-------------------KISDFGMARIFGG 576
Y+H + ++H D+K SN+ + P KI D G
Sbjct: 128 YIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 184
Query: 577 DQIEENTNRVVGTYGYMAPEYAMEGLFS-TKSDVYSFGVLLL 617
Q+EE +R ++A E E K+D+++ + ++
Sbjct: 185 PQVEEGDSR------FLANEVLQENYTHLPKADIFALALTVV 220
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 34/222 (15%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEEFKT--EIALIAQL-Q 476
T +F K+G G FGSV+K V + +G A+KR + ++E E+ A L Q
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAK-RSLLDWSKRFEIICGIARGIL 535
H ++V E+ ++ EY SL I + + S ++ +++ + RG+
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNP-------------------KISDFGMARIFGG 576
Y+H + ++H D+K SN+ + P KI D G
Sbjct: 128 YIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 184
Query: 577 DQIEENTNRVVGTYGYMAPEYAMEGLFS-TKSDVYSFGVLLL 617
Q+EE +R ++A E E K+D+++ + ++
Sbjct: 185 PQVEEGDSR------FLANEVLQENYTHLPKADIFALALTVV 220
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 35 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAA 149
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 201
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAA 148
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 34/222 (15%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEEFKT--EIALIAQL-Q 476
T +F K+G G FGSV+K V + +G A+KR + ++E E+ A L Q
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAK-RSLLDWSKRFEIICGIARGIL 535
H ++V E+ ++ EY SL I + + S ++ +++ + RG+
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNP-------------------KISDFGMARIFGG 576
Y+H + ++H D+K SN+ + P KI D G
Sbjct: 130 YIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 186
Query: 577 DQIEENTNRVVGTYGYMAPEYAMEGLFS-TKSDVYSFGVLLL 617
Q+EE +R ++A E E K+D+++ + ++
Sbjct: 187 PQVEEGDSR------FLANEVLQENYTHLPKADIFALALTVV 222
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 34/222 (15%)
Query: 421 TNDFSSDNKLGEGGFGSVYKGVLQ-NGKEIAVKRLSRSSGQGIEEFKT--EIALIAQL-Q 476
T +F K+G G FGSV+K V + +G A+KR + ++E E+ A L Q
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 477 HRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAK-RSLLDWSKRFEIICGIARGIL 535
H ++V E+ ++ EY SL I + + S ++ +++ + RG+
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNP-------------------KISDFGMARIFGG 576
Y+H + ++H D+K SN+ + P KI D G
Sbjct: 126 YIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 182
Query: 577 DQIEENTNRVVGTYGYMAPEYAMEGLFS-TKSDVYSFGVLLL 617
Q+EE +R ++A E E K+D+++ + ++
Sbjct: 183 PQVEEGDSR------FLANEVLQENYTHLPKADIFALALTVV 218
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 133/335 (39%), Gaps = 48/335 (14%)
Query: 396 AAELDDSRRNSEYLP-----VFDLSNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEI 449
A+EL + +++L V L + +DF +G G F V + Q G+
Sbjct: 30 ASELAQDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVY 89
Query: 450 AVKRLSR----SSGQGIEEFKTEIALIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSL 505
A+K +++ G+ + F+ E ++ R + + +E L+ EY L
Sbjct: 90 AMKIMNKWDMLKRGE-VSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDL 148
Query: 506 DVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKI 565
+ +R + ++ + +A ++ + RL +HRD+K N+LLD + ++
Sbjct: 149 LTLLSKFGERIPAEMARFY-----LAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRL 203
Query: 566 SDFGMARIFGGDQIEENTNRVVGTYGYMAPEY-------AMEGLFSTKSDVYSFGVLLLE 618
+DFG D + VGT Y++PE G + + D ++ GV E
Sbjct: 204 ADFGSCLKLRADGTVRSLV-AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYE 262
Query: 619 IILGRRNNTFHLEQGSGSWNLVGHVWDLWKEGTAMEAVDKSLGESCCAPEILRCIHLGLL 678
+ G+ F+ + + ++ + H +KE ++ VD+ + PE R LL
Sbjct: 263 MFYGQ--TPFYADSTAETYGKIVH----YKEHLSLPLVDEGV------PEEARDFIQRLL 310
Query: 679 CVQEQATDRPNMSAVVSMLGSDNAPSSPKHPAFIA 713
C E + LG A HP F
Sbjct: 311 CPPE------------TRLGRGGAGDFRTHPFFFG 333
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 55 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 114
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAA 169
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 170 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCG 221
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 423 DFSSDNKLGEGGFGSVYKGVLQNGKEI-AVKRLSRSSGQGIEE---FKTEIALIAQLQHR 478
DF +G G FG V L+N ++ A+K L++ E F+ E ++ +
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 479 NLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLH 538
+ ++ ++ L+ +Y L + + + + L + RF + A ++ +
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDL-LTLLSKFEDRLPEEMARFYL----AEMVIAID 189
Query: 539 QDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAPEY- 597
+L +HRD+K N+L+D + +++DFG D + ++ VGT Y++PE
Sbjct: 190 SVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ-SSVAVGTPDYISPEIL 248
Query: 598 -AME---GLFSTKSDVYSFGVLLLEIILG 622
AME G + + D +S GV + E++ G
Sbjct: 249 QAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 86/208 (41%), Gaps = 20/208 (9%)
Query: 423 DFSSDN---KLGEGGFGSVYKGVLQNGKEIAVKRLSRS--SGQGIEEFKTEIALIAQLQH 477
DF N KL E G ++KG Q G +I VK L S + +F E + H
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 478 RNLVSILGCC--IEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGIL 535
N++ +LG C LI + P SL + E ++D S+ + ARG
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWXPYGSL-YNVLHEGTNFVVDQSQAVKFALDXARGXA 125
Query: 536 YLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVGTYGYMAP 595
+LH L I L + +V +D +IS + F ++ R ++AP
Sbjct: 126 FLHTLEPL-IPRHALNSRSVXIDEDXTARISXADVKFSF------QSPGRXYAP-AWVAP 177
Query: 596 EYAMEGLFST---KSDVYSFGVLLLEII 620
E + T +D +SF VLL E++
Sbjct: 178 EALQKKPEDTNRRSADXWSFAVLLWELV 205
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAA 148
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ ++ G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAA 148
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+++D +++DFG A+ +++ T + G
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+APE + ++ D ++ GVL+ E+ G
Sbjct: 201 TPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 424 FSSDNKLGEGGFGS-VYKGVLQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQL-QHRNLV 481
F + LG G G+ VY+G+ N +++AVKR+ + E+ L+ + +H N++
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDN-RDVAVKRILPECFSFADR---EVQLLRESDEHPNVI 81
Query: 482 SILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDS 541
C ++++ I L +L Y+ E K + ++ G+ +LH
Sbjct: 82 RYF-CTEKDRQFQYIAIELCAATLQEYV--EQKDFAHLGLEPITLLQQTTSGLAHLHS-- 136
Query: 542 RLRIIHRDLKASNVLLD-----AAMNPKISDFGMARIFG-GDQIEENTNRVVGTYGYMAP 595
L I+HRDLK N+L+ + ISDFG+ + G + V GT G++AP
Sbjct: 137 -LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
Query: 596 EYAMEGLFSTKS---DVYSFGVLLLEII 620
E E + D++S G + +I
Sbjct: 196 EMLSEDCKENPTYTVDIFSAGCVFYYVI 223
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 38/222 (17%)
Query: 428 NKLGEGGFGSVYKGVLQN--GKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILG 485
+ LGEG FG V + + G+ +AVK + ++ + E ++EI ++ L + S
Sbjct: 20 DTLGEGAFGKVVECIDHKAGGRHVAVK-IVKNVDRYCEAARSEIQVLEHLNTTDPNSTFR 78
Query: 486 CCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSK-------RFEIICGIA----RGI 534
C +ML E+ + +F+ S D+ K R + I +A + +
Sbjct: 79 CV-----QML--EWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSV 131
Query: 535 LYLHQDSRLRIIHRDLKASNVLL-----DAAMNPKIS---------DFGMARIFGGDQIE 580
+LH + ++ H DLK N+L A NPKI D + +
Sbjct: 132 NFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 581 ENTNRVVGTYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
E+ + +V Y APE + +S DV+S G +L+E LG
Sbjct: 189 EHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 44/225 (19%)
Query: 426 SDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSGQGIEEF----KTEIALIAQLQ-HRN 479
S+ LG G G+V ++G Q G+ +AVKR+ + +F EI L+ + H N
Sbjct: 37 SEKILGYGSSGTVVFQGSFQ-GRPVAVKRM-------LIDFCDIALMEIKLLTESDDHPN 88
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR---SLLDWSKRF---EIICGIARG 533
++ C E ++ L Y L +L++ E+K L K + ++ IA G
Sbjct: 89 VIRYY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAA-------------MNPKISDFGMARIF--GGDQ 578
+ +LH L+IIHRDLK N+L+ + + ISDFG+ + G
Sbjct: 146 VAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 579 IEENTNRVVGTYGYMAPEYAMEGL---FSTKSDVYSFGVLLLEII 620
N N GT G+ APE E + D++S G + I+
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYIL 247
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 44/225 (19%)
Query: 426 SDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSGQGIEEF----KTEIALIAQLQ-HRN 479
S+ LG G G+V ++G Q G+ +AVKR+ + +F EI L+ + H N
Sbjct: 37 SEKILGYGSSGTVVFQGSFQ-GRPVAVKRM-------LIDFCDIALMEIKLLTESDDHPN 88
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR---SLLDWSKRF---EIICGIARG 533
++ C E ++ L Y L +L++ E+K L K + ++ IA G
Sbjct: 89 VIRYY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAA-------------MNPKISDFGMARIF--GGDQ 578
+ +LH L+IIHRDLK N+L+ + + ISDFG+ + G
Sbjct: 146 VAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 579 IEENTNRVVGTYGYMAPEYAMEGL---FSTKSDVYSFGVLLLEII 620
N N GT G+ APE E + D++S G + I+
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYIL 247
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAA 148
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y+AP + ++ D ++ GVL+ E+ G
Sbjct: 201 TPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 48/229 (20%)
Query: 426 SDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSGQGIEEF----KTEIALIAQLQ-HRN 479
S+ LG G G+V ++G Q G+ +AVKR+ + +F EI L+ + H N
Sbjct: 19 SEKILGYGSSGTVVFQGSFQ-GRPVAVKRM-------LIDFCDIALMEIKLLTESDDHPN 70
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR---SLLDWSKRF---EIICGIARG 533
++ C E ++ L Y L +L++ E+K L K + ++ IA G
Sbjct: 71 VIRYY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAA-------------MNPKISDFGMARIF--GGDQ 578
+ +LH L+IIHRDLK N+L+ + + ISDFG+ + G
Sbjct: 128 VAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
Query: 579 IEENTNRVVGTYGYMAPEYAMEG-------LFSTKSDVYSFGVLLLEII 620
N N GT G+ APE E + D++S G + I+
Sbjct: 185 FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 19/214 (8%)
Query: 415 SNIAAATNDFSSDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSG---QGIEEFKTEIA 470
S A + F LG G FG V ++G A+K L + + IE E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 471 LIAQLQHRNLVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR--SLLDWSKRFEIIC 528
++ + LV + + ++ EY+ + F +R + RF
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAA 148
Query: 529 GIARGILYLHQDSRLRIIHRDLKASNVLLDAAMNPKISDFGMARIFGGDQIEENTNRVVG 588
I YLH L +I+RDLK N+L+D +++DFG A+ +++ T + G
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T +APE + ++ D ++ GVL+ E+ G
Sbjct: 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 48/229 (20%)
Query: 426 SDNKLGEGGFGSV-YKGVLQNGKEIAVKRLSRSSGQGIEEF----KTEIALIAQLQ-HRN 479
S+ LG G G+V ++G Q G+ +AVKR+ + +F EI L+ + H N
Sbjct: 19 SEKILGYGSSGTVVFQGSFQ-GRPVAVKRM-------LIDFCDIALMEIKLLTESDDHPN 70
Query: 480 LVSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKR---SLLDWSKRF---EIICGIARG 533
++ C E ++ L Y L +L++ E+K L K + ++ IA G
Sbjct: 71 VIRYY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 534 ILYLHQDSRLRIIHRDLKASNVLLDAA-------------MNPKISDFGMARIF--GGDQ 578
+ +LH L+IIHRDLK N+L+ + + ISDFG+ + G
Sbjct: 128 VAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 184
Query: 579 IEENTNRVVGTYGYMAPEYAMEG-------LFSTKSDVYSFGVLLLEII 620
N N GT G+ APE E + D++S G + I+
Sbjct: 185 FRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 495 LIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASN 554
L++E++ N F + +++L D+ RF + I + + Y H + I+HRD+K N
Sbjct: 111 LVFEHVNNTD-----FKQLRQTLTDYDIRF-YMYEILKALDYCHS---MGIMHRDVKPHN 161
Query: 555 VLLDAAMNP-KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME-GLFSTKSDVYSF 612
V++D ++ D+G+A + Q E RV Y + PE ++ ++ D++S
Sbjct: 162 VMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRY-FKGPELLVDYQMYDYSLDMWSL 218
Query: 613 GVLLLEIILGRRNNTFH 629
G +L +I R+ FH
Sbjct: 219 GCMLASMIF-RKEPFFH 234
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEF------KTEIALIAQLQ--HRNL 480
LG GGFGSVY G+ + + +A+K + + E E+ L+ ++ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
+ +L +LI E P D++ F + +L + R + + + H
Sbjct: 72 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHNX 129
Query: 541 SRLRIIHRDLKASNVLLDAAMNP-KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM 599
++HRD+K N+L+D K+ DFG + D + + + GT Y PE+
Sbjct: 130 G---VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIR 182
Query: 600 EGLFSTKS-DVYSFGVLLLEIILG 622
+ +S V+S G+LL +++ G
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 28/214 (13%)
Query: 429 KLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
KLG G F +V+ + N +A+K + R E + EI L+ ++ +
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMK-IVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 84
Query: 488 IEEQEKMLIY--EYLPNKSLDVYIFDEAKRSLLDWSKRFE-----------IICGIARGI 534
K+L + PN V +F+ +LL K++E I + G+
Sbjct: 85 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 144
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNP------KISDFGMARIFGGDQIEENTNRVVG 588
Y+H+ R IIH D+K NVL++ +P KI+D G A + +E+ +
Sbjct: 145 DYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY-----DEHYTNSIQ 197
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y +PE + + +D++S L+ E+I G
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 28/214 (13%)
Query: 429 KLGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKTEIALIAQLQHRNLVSILGCC 487
KLG G F +V+ + N +A+K + R E + EI L+ ++ +
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMK-IVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 84
Query: 488 IEEQEKMLIY--EYLPNKSLDVYIFDEAKRSLLDWSKRFE-----------IICGIARGI 534
K+L + PN V +F+ +LL K++E I + G+
Sbjct: 85 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 144
Query: 535 LYLHQDSRLRIIHRDLKASNVLLDAAMNP------KISDFGMARIFGGDQIEENTNRVVG 588
Y+H+ R IIH D+K NVL++ +P KI+D G A + +E+ +
Sbjct: 145 DYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY-----DEHYTNSIQ 197
Query: 589 TYGYMAPEYAMEGLFSTKSDVYSFGVLLLEIILG 622
T Y +PE + + +D++S L+ E+I G
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT------EIALIAQLQ--HRNL 480
LG GGFGSVY G+ + + +A+K + + E E+ L+ ++ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
+ +L +LI E P D++ F + +L + R + + + H
Sbjct: 91 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHNC 148
Query: 541 SRLRIIHRDLKASNVLLDAAMNP-KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM 599
++HRD+K N+L+D K+ DFG + D + + + GT Y PE+
Sbjct: 149 G---VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIR 201
Query: 600 EGLFSTKS-DVYSFGVLLLEIILG 622
+ +S V+S G+LL +++ G
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 495 LIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQDSRLRIIHRDLKASN 554
L++EY+ N F + + L D+ RF + + + + Y H I+HRD+K N
Sbjct: 112 LVFEYINNTD-----FKQLYQILTDFDIRF-YMYELLKALDYCHSKG---IMHRDVKPHN 162
Query: 555 VLLDAAMNP-KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAME-GLFSTKSDVYSF 612
V++D ++ D+G+A + Q E RV Y + PE ++ ++ D++S
Sbjct: 163 VMIDHQQKKLRLIDWGLAEFYHPAQ--EYNVRVASRY-FKGPELLVDYQMYDYSLDMWSL 219
Query: 613 GVLLLEIILGRRNNTFH 629
G +L +I RR FH
Sbjct: 220 GCMLASMIF-RREPFFH 235
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 430 LGEGGFGSVYKGV-LQNGKEIAVKRLSRSSGQGIEEFKT------EIALIAQLQ--HRNL 480
LG GGFGSVY G+ + + +A+K + + E E+ L+ ++ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 481 VSILGCCIEEQEKMLIYEYLPNKSLDVYIFDEAKRSLLDWSKRFEIICGIARGILYLHQD 540
+ +L +LI E P D++ F + +L + R + + + H
Sbjct: 92 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHNC 149
Query: 541 SRLRIIHRDLKASNVLLDAAMNP-KISDFGMARIFGGDQIEENTNRVVGTYGYMAPEYAM 599
++HRD+K N+L+D K+ DFG + D + + + GT Y PE+
Sbjct: 150 G---VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIR 202
Query: 600 EGLFSTKS-DVYSFGVLLLEIILG 622
+ +S V+S G+LL +++ G
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCG 226
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,744,951
Number of Sequences: 62578
Number of extensions: 1070711
Number of successful extensions: 5363
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 272
Number of HSP's that attempted gapping in prelim test: 2893
Number of HSP's gapped (non-prelim): 1161
length of query: 743
length of database: 14,973,337
effective HSP length: 106
effective length of query: 637
effective length of database: 8,340,069
effective search space: 5312623953
effective search space used: 5312623953
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)