Query 041323
Match_columns 433
No_of_seqs 184 out of 1713
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 09:48:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041323.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041323hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 4.9E-65 1.7E-69 510.2 33.8 383 4-432 12-433 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 3E-57 1E-61 460.3 40.5 402 1-432 1-448 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.1E-56 3.9E-61 457.0 36.2 402 4-432 7-458 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 3.2E-56 1.1E-60 449.8 36.4 385 4-432 6-431 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 2.2E-54 7.5E-59 437.5 38.1 386 4-432 8-442 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 4.7E-41 1.6E-45 336.7 32.9 355 5-432 12-405 (424)
7 4amg_A Snogd; transferase, pol 100.0 3.7E-41 1.3E-45 334.4 24.9 324 4-433 21-385 (400)
8 1iir_A Glycosyltransferase GTF 100.0 4.4E-40 1.5E-44 328.9 29.7 344 6-431 1-383 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 6.6E-39 2.2E-43 320.5 26.8 344 6-431 1-384 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 1.2E-37 4E-42 310.3 27.5 337 6-431 1-366 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 2E-35 6.9E-40 294.8 29.5 349 4-432 19-397 (415)
12 3ia7_A CALG4; glycosysltransfe 100.0 1.3E-34 4.5E-39 287.1 30.9 348 5-432 4-382 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 2.1E-34 7.2E-39 290.0 25.3 339 5-432 20-419 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 1.3E-33 4.5E-38 283.0 30.6 345 5-431 7-382 (430)
15 2p6p_A Glycosyl transferase; X 100.0 3.6E-33 1.2E-37 275.7 31.4 318 6-432 1-363 (384)
16 4fzr_A SSFS6; structural genom 100.0 1.8E-32 6.1E-37 272.1 18.5 324 4-432 14-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 6.9E-31 2.4E-35 260.7 22.4 317 4-432 19-381 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 6.1E-30 2.1E-34 253.0 22.4 323 5-432 1-372 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 4E-28 1.4E-32 241.4 24.7 331 4-431 19-391 (412)
20 2o6l_A UDP-glucuronosyltransfe 100.0 6.9E-28 2.3E-32 210.5 17.5 165 240-432 5-170 (170)
21 3s2u_A UDP-N-acetylglucosamine 99.9 8.1E-26 2.8E-30 221.6 26.6 305 6-427 3-339 (365)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 7.8E-17 2.7E-21 157.0 27.0 302 1-426 2-337 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.6 4.1E-15 1.4E-19 133.8 10.6 139 249-409 21-196 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.4 7.7E-12 2.6E-16 116.9 16.3 117 256-391 157-274 (282)
25 3c48_A Predicted glycosyltrans 98.9 6.9E-07 2.4E-11 88.5 27.0 97 321-429 305-408 (438)
26 3fro_A GLGA glycogen synthase; 98.9 6.6E-07 2.3E-11 88.3 26.8 147 258-428 252-412 (439)
27 3okp_A GDP-mannose-dependent a 98.9 1.9E-07 6.4E-12 91.0 22.0 145 258-428 199-360 (394)
28 2gek_A Phosphatidylinositol ma 98.8 3.3E-07 1.1E-11 89.7 19.5 144 258-427 209-364 (406)
29 2r60_A Glycosyl transferase, g 98.7 3.6E-06 1.2E-10 85.0 26.0 97 321-429 334-441 (499)
30 2jjm_A Glycosyl transferase, g 98.7 5.8E-06 2E-10 80.7 24.5 145 258-427 212-365 (394)
31 2iw1_A Lipopolysaccharide core 98.7 1.3E-06 4.5E-11 84.3 19.5 147 257-430 196-355 (374)
32 1vgv_A UDP-N-acetylglucosamine 98.3 4.7E-06 1.6E-10 80.9 12.3 142 255-423 204-353 (384)
33 2f9f_A First mannosyl transfer 98.3 1E-05 3.5E-10 69.8 12.8 141 259-427 25-174 (177)
34 1v4v_A UDP-N-acetylglucosamine 98.1 8.3E-06 2.8E-10 79.0 10.6 138 256-421 198-343 (376)
35 3dzc_A UDP-N-acetylglucosamine 98.1 1.4E-05 4.8E-10 78.4 12.2 140 255-421 229-376 (396)
36 2iuy_A Avigt4, glycosyltransfe 98.1 4.1E-05 1.4E-09 73.0 14.5 125 259-411 164-307 (342)
37 3ot5_A UDP-N-acetylglucosamine 98.0 2E-05 6.8E-10 77.5 9.9 87 321-421 281-370 (403)
38 3qhp_A Type 1 capsular polysac 98.0 7.6E-05 2.6E-09 63.1 11.9 145 257-430 2-158 (166)
39 3s28_A Sucrose synthase 1; gly 98.0 0.00052 1.8E-08 73.0 20.5 94 322-427 640-749 (816)
40 4hwg_A UDP-N-acetylglucosamine 97.9 6.2E-05 2.1E-09 73.5 11.3 141 246-415 194-345 (385)
41 3beo_A UDP-N-acetylglucosamine 97.9 6.2E-05 2.1E-09 72.6 11.3 86 322-421 263-351 (375)
42 2bfw_A GLGA glycogen synthase; 97.8 0.00066 2.3E-08 59.1 16.1 146 259-429 38-198 (200)
43 2xci_A KDO-transferase, 3-deox 97.5 0.00062 2.1E-08 66.0 12.2 97 323-429 261-362 (374)
44 3q3e_A HMW1C-like glycosyltran 97.4 0.0016 5.4E-08 66.6 14.0 150 256-425 440-601 (631)
45 2vsy_A XCC0866; transferase, g 97.4 0.0019 6.6E-08 65.9 14.9 97 322-427 434-537 (568)
46 4gyw_A UDP-N-acetylglucosamine 97.4 0.0011 3.9E-08 69.9 13.1 150 255-425 521-681 (723)
47 2x6q_A Trehalose-synthase TRET 97.3 0.0061 2.1E-07 59.4 16.4 94 321-428 292-395 (416)
48 3oy2_A Glycosyltransferase B73 97.1 0.0034 1.2E-07 61.2 11.7 90 324-427 256-370 (413)
49 1rzu_A Glycogen synthase 1; gl 96.9 0.0076 2.6E-07 60.1 12.5 143 258-424 292-455 (485)
50 3rhz_A GTF3, nucleotide sugar 96.6 0.0032 1.1E-07 60.1 7.1 95 323-432 215-322 (339)
51 2qzs_A Glycogen synthase; glyc 96.5 0.012 4.1E-07 58.6 10.4 143 258-424 293-456 (485)
52 2x0d_A WSAF; GT4 family, trans 93.7 0.1 3.5E-06 51.0 6.7 80 322-414 295-381 (413)
53 2hy7_A Glucuronosyltransferase 92.9 0.58 2E-05 45.3 10.9 75 321-413 264-353 (406)
54 3vue_A GBSS-I, granule-bound s 92.6 1 3.5E-05 45.5 12.4 147 259-423 329-490 (536)
55 3vue_A GBSS-I, granule-bound s 88.3 0.3 1E-05 49.4 3.9 37 4-43 8-52 (536)
56 3tov_A Glycosyl transferase fa 84.7 2.9 9.9E-05 39.5 8.5 46 5-51 8-55 (349)
57 2iz6_A Molybdenum cofactor car 83.4 18 0.00062 30.3 12.0 78 324-410 91-172 (176)
58 2x0d_A WSAF; GT4 family, trans 82.5 0.82 2.8E-05 44.5 3.7 41 3-44 44-89 (413)
59 1psw_A ADP-heptose LPS heptosy 81.8 8.9 0.0003 35.6 10.7 45 6-51 1-47 (348)
60 3nb0_A Glycogen [starch] synth 81.0 2.2 7.7E-05 44.0 6.3 97 324-428 495-615 (725)
61 2gt1_A Lipopolysaccharide hept 80.4 5.2 0.00018 37.0 8.3 136 256-413 178-323 (326)
62 2x6q_A Trehalose-synthase TRET 80.0 2.3 7.7E-05 40.8 5.9 41 4-45 39-81 (416)
63 3zqu_A Probable aromatic acid 77.9 2.6 8.9E-05 36.7 4.9 48 1-51 1-48 (209)
64 1rzu_A Glycogen synthase 1; gl 71.8 3.8 0.00013 40.1 5.1 38 6-44 1-44 (485)
65 2qzs_A Glycogen synthase; glyc 70.2 4.4 0.00015 39.7 5.1 38 6-44 1-44 (485)
66 3eag_A UDP-N-acetylmuramate:L- 66.5 37 0.0013 31.4 10.4 85 5-113 4-95 (326)
67 1ccw_A Protein (glutamate muta 65.7 7.1 0.00024 31.3 4.6 41 5-46 3-43 (137)
68 4grd_A N5-CAIR mutase, phospho 63.2 47 0.0016 27.6 9.0 38 256-295 12-49 (173)
69 1y80_A Predicted cobalamin bin 60.2 11 0.00038 32.4 5.1 45 4-49 87-131 (210)
70 3dfz_A SIRC, precorrin-2 dehyd 57.5 22 0.00075 31.1 6.5 151 249-432 26-185 (223)
71 3beo_A UDP-N-acetylglucosamine 56.1 14 0.00047 34.4 5.4 40 5-46 8-49 (375)
72 1xmp_A PURE, phosphoribosylami 55.6 87 0.003 25.9 11.6 37 257-295 12-48 (170)
73 2yxb_A Coenzyme B12-dependent 55.6 10 0.00035 31.3 3.9 42 4-46 17-58 (161)
74 2i2x_B MTAC, methyltransferase 55.4 14 0.00048 33.1 5.1 40 4-44 122-161 (258)
75 1sbz_A Probable aromatic acid 55.4 12 0.00041 32.1 4.4 44 6-51 1-45 (197)
76 3t5t_A Putative glycosyltransf 54.7 64 0.0022 31.8 10.1 78 323-413 353-439 (496)
77 3lqk_A Dipicolinate synthase s 54.2 13 0.00045 32.0 4.4 48 1-50 3-51 (201)
78 3qjg_A Epidermin biosynthesis 54.0 17 0.00058 30.5 5.0 44 6-51 6-49 (175)
79 3s2u_A UDP-N-acetylglucosamine 53.6 19 0.00065 33.8 6.0 36 257-294 4-39 (365)
80 4e5s_A MCCFLIKE protein (BA_56 51.6 26 0.00088 32.7 6.4 73 270-369 63-137 (331)
81 1v4v_A UDP-N-acetylglucosamine 51.4 19 0.00063 33.6 5.5 43 1-45 1-44 (376)
82 1w2w_B 5-methylthioribose-1-ph 51.4 16 0.00055 31.1 4.5 72 25-118 22-95 (191)
83 3rg8_A Phosphoribosylaminoimid 50.8 1E+02 0.0035 25.2 11.4 36 258-295 4-39 (159)
84 1u11_A PURE (N5-carboxyaminoim 50.6 1.1E+02 0.0038 25.6 10.8 137 258-431 23-170 (182)
85 1ydh_A AT5G11950; structural g 50.6 1.2E+02 0.0042 26.1 12.3 44 324-368 89-143 (216)
86 1psw_A ADP-heptose LPS heptosy 50.6 24 0.00081 32.6 6.1 95 255-366 179-286 (348)
87 3lk7_A UDP-N-acetylmuramoylala 50.4 58 0.002 31.5 9.1 32 5-42 9-40 (451)
88 3ezx_A MMCP 1, monomethylamine 50.1 19 0.00066 31.2 5.0 45 4-49 91-135 (215)
89 2qyt_A 2-dehydropantoate 2-red 49.4 6.7 0.00023 36.0 2.0 36 1-42 4-45 (317)
90 4g6h_A Rotenone-insensitive NA 49.3 10 0.00036 37.6 3.5 37 3-45 40-76 (502)
91 3hn7_A UDP-N-acetylmuramate-L- 49.1 92 0.0031 30.9 10.4 33 6-43 20-52 (524)
92 3e2i_A Thymidine kinase; Zn-bi 47.8 73 0.0025 27.6 8.2 101 6-116 28-136 (219)
93 2r8r_A Sensor protein; KDPD, P 47.6 26 0.0009 30.7 5.4 40 4-44 5-44 (228)
94 3dfu_A Uncharacterized protein 47.4 15 0.00051 32.4 3.8 36 1-42 2-37 (232)
95 1id1_A Putative potassium chan 46.9 16 0.00054 29.4 3.7 33 5-43 3-35 (153)
96 3lp6_A Phosphoribosylaminoimid 46.7 1.2E+02 0.0043 25.1 10.5 36 258-295 9-44 (174)
97 1uqt_A Alpha, alpha-trehalose- 46.6 35 0.0012 33.5 6.8 87 324-425 333-433 (482)
98 3mcu_A Dipicolinate synthase, 46.2 20 0.0007 30.9 4.4 44 1-46 1-45 (207)
99 4hv4_A UDP-N-acetylmuramate--L 46.0 1E+02 0.0034 30.3 10.1 31 6-41 23-53 (494)
100 2ejb_A Probable aromatic acid 45.6 23 0.00079 30.0 4.6 43 7-51 3-45 (189)
101 1lss_A TRK system potassium up 45.2 16 0.00056 28.3 3.5 34 3-42 2-35 (140)
102 4b4k_A N5-carboxyaminoimidazol 45.1 1.4E+02 0.0046 25.0 11.3 38 256-295 22-59 (181)
103 4b4o_A Epimerase family protei 45.0 22 0.00075 32.0 4.7 32 6-42 1-32 (298)
104 3ors_A N5-carboxyaminoimidazol 44.6 1.2E+02 0.0042 24.8 8.5 139 258-431 5-152 (163)
105 2yvk_A Methylthioribose-1-phos 43.6 35 0.0012 32.4 5.9 26 94-119 272-297 (374)
106 4h1h_A LMO1638 protein; MCCF-l 43.6 42 0.0014 31.1 6.4 73 270-369 63-137 (327)
107 1mvl_A PPC decarboxylase athal 42.9 32 0.0011 29.7 5.1 44 5-51 19-62 (209)
108 1t9k_A Probable methylthioribo 42.0 38 0.0013 31.8 5.8 22 97-118 250-271 (347)
109 2a0u_A Initiation factor 2B; S 41.7 40 0.0014 32.0 6.0 23 97-119 279-301 (383)
110 3sr3_A Microcin immunity prote 41.1 36 0.0012 31.7 5.6 73 270-369 64-138 (336)
111 2pju_A Propionate catabolism o 40.3 52 0.0018 28.7 6.1 28 341-369 64-91 (225)
112 4hb9_A Similarities with proba 38.0 23 0.00077 33.3 3.8 30 5-40 1-30 (412)
113 2g1u_A Hypothetical protein TM 37.9 39 0.0013 27.1 4.7 34 4-43 18-51 (155)
114 3lyh_A Cobalamin (vitamin B12) 37.7 92 0.0032 23.9 6.8 36 256-291 6-41 (126)
115 1wcv_1 SOJ, segregation protei 37.6 29 0.001 30.5 4.3 43 1-44 1-45 (257)
116 1zl0_A Hypothetical protein PA 37.5 61 0.0021 29.8 6.4 73 270-369 65-139 (311)
117 3oow_A Phosphoribosylaminoimid 37.5 1.5E+02 0.0052 24.4 8.0 140 257-431 6-154 (166)
118 3ot5_A UDP-N-acetylglucosamine 36.8 39 0.0013 32.2 5.3 39 5-45 27-67 (403)
119 3mc3_A DSRE/DSRF-like family p 36.6 75 0.0026 24.9 6.1 36 15-51 28-63 (134)
120 1vgv_A UDP-N-acetylglucosamine 36.3 47 0.0016 30.8 5.7 35 6-42 1-36 (384)
121 1t5o_A EIF2BD, translation ini 36.1 48 0.0016 31.1 5.5 24 95-118 245-268 (351)
122 3lrx_A Putative hydrogenase; a 36.1 27 0.00093 28.4 3.5 36 6-45 24-59 (158)
123 2hy7_A Glucuronosyltransferase 35.2 19 0.00066 34.3 2.8 37 4-43 13-52 (406)
124 2q5c_A NTRC family transcripti 35.0 38 0.0013 28.8 4.3 32 338-370 49-80 (196)
125 3ghy_A Ketopantoate reductase 34.7 24 0.00083 32.7 3.3 43 1-51 1-43 (335)
126 3kjh_A CO dehydrogenase/acetyl 34.6 33 0.0011 29.6 4.1 38 6-44 1-38 (254)
127 2i2c_A Probable inorganic poly 34.3 29 0.00099 31.2 3.6 28 341-368 36-69 (272)
128 2f62_A Nucleoside 2-deoxyribos 33.9 59 0.002 26.7 5.2 21 347-367 82-105 (161)
129 3kuu_A Phosphoribosylaminoimid 33.8 2E+02 0.0069 23.8 9.6 139 258-431 14-161 (174)
130 3tov_A Glycosyl transferase fa 33.7 38 0.0013 31.6 4.5 97 255-366 184-286 (349)
131 2gt1_A Lipopolysaccharide hept 33.5 38 0.0013 31.0 4.4 45 6-51 1-47 (326)
132 1o4v_A Phosphoribosylaminoimid 33.4 2.1E+02 0.0072 23.9 13.0 38 256-295 13-50 (183)
133 3ia7_A CALG4; glycosysltransfe 33.3 1.2E+02 0.0042 27.9 8.2 34 258-293 7-40 (402)
134 3oy2_A Glycosyltransferase B73 33.1 40 0.0014 31.7 4.7 38 6-45 1-41 (413)
135 1p3y_1 MRSD protein; flavoprot 33.1 26 0.00088 29.9 2.9 45 5-51 8-52 (194)
136 3hn2_A 2-dehydropantoate 2-red 33.0 59 0.002 29.6 5.7 39 6-51 3-41 (312)
137 1yt5_A Inorganic polyphosphate 32.8 41 0.0014 29.9 4.4 52 342-413 43-97 (258)
138 1kjn_A MTH0777; hypotethical p 32.8 28 0.00097 28.2 2.8 48 4-52 5-54 (157)
139 3k96_A Glycerol-3-phosphate de 32.7 23 0.00079 33.3 2.8 37 1-43 25-61 (356)
140 3of5_A Dethiobiotin synthetase 32.7 48 0.0016 28.8 4.7 37 3-40 1-39 (228)
141 2vou_A 2,6-dihydroxypyridine h 32.4 36 0.0012 32.1 4.2 35 1-41 1-35 (397)
142 3tla_A MCCF; serine protease, 32.3 53 0.0018 31.1 5.2 73 270-369 94-168 (371)
143 3ecs_A Translation initiation 32.2 92 0.0031 28.7 6.7 25 93-117 208-232 (315)
144 3tsa_A SPNG, NDP-rhamnosyltran 32.1 76 0.0026 29.5 6.5 29 338-368 114-143 (391)
145 2r85_A PURP protein PF1517; AT 31.8 38 0.0013 30.9 4.1 34 5-45 2-35 (334)
146 4g65_A TRK system potassium up 31.4 21 0.00071 35.0 2.3 34 3-42 1-34 (461)
147 3lyu_A Putative hydrogenase; t 30.2 32 0.0011 27.4 2.9 36 6-45 19-54 (142)
148 2h31_A Multifunctional protein 30.1 3.4E+02 0.012 26.0 10.4 38 256-295 265-302 (425)
149 3i83_A 2-dehydropantoate 2-red 30.0 55 0.0019 29.9 4.9 39 6-51 3-41 (320)
150 3fgn_A Dethiobiotin synthetase 29.9 53 0.0018 29.1 4.5 38 2-40 22-61 (251)
151 1kjq_A GART 2, phosphoribosylg 29.8 53 0.0018 30.9 4.9 38 1-44 7-44 (391)
152 3llv_A Exopolyphosphatase-rela 29.7 28 0.00097 27.3 2.5 32 5-42 6-37 (141)
153 2xvy_A Chelatase, putative; me 29.2 1.1E+02 0.0038 27.0 6.7 39 256-294 10-50 (269)
154 3l4e_A Uncharacterized peptida 29.1 1.1E+02 0.0039 26.0 6.4 47 245-291 17-63 (206)
155 3fwz_A Inner membrane protein 28.9 31 0.0011 27.2 2.6 33 5-43 7-39 (140)
156 3qjg_A Epidermin biosynthesis 28.9 2.5E+02 0.0084 23.2 9.6 112 257-386 7-142 (175)
157 3hwr_A 2-dehydropantoate 2-red 28.9 40 0.0014 30.9 3.7 42 4-51 18-59 (318)
158 1g63_A Epidermin modifying enz 28.4 51 0.0017 27.7 3.9 43 7-51 4-46 (181)
159 3pnx_A Putative sulfurtransfer 28.1 1.1E+02 0.0037 25.1 5.8 49 1-51 2-50 (160)
160 2lnd_A De novo designed protei 28.0 72 0.0025 22.6 3.9 48 359-411 50-100 (112)
161 1jx7_A Hypothetical protein YC 27.8 82 0.0028 23.5 4.8 34 16-50 15-50 (117)
162 2qs7_A Uncharacterized protein 27.8 81 0.0028 25.1 4.9 44 7-51 10-53 (144)
163 3e8x_A Putative NAD-dependent 27.6 2.7E+02 0.0094 23.4 9.6 34 5-43 21-54 (236)
164 1ycd_A Hypothetical 27.3 kDa p 27.5 75 0.0025 27.0 5.1 41 1-43 1-45 (243)
165 2f6k_A Metal-dependent hydrola 27.3 1.9E+02 0.0064 25.7 8.1 48 244-294 107-157 (307)
166 1t35_A Hypothetical protein YV 27.3 2.7E+02 0.0093 23.2 8.6 44 325-368 82-135 (191)
167 3bul_A Methionine synthase; tr 27.0 67 0.0023 32.4 5.1 45 4-49 97-141 (579)
168 2fb6_A Conserved hypothetical 26.9 63 0.0021 24.9 3.9 45 1-47 4-52 (117)
169 4hwg_A UDP-N-acetylglucosamine 26.1 84 0.0029 29.7 5.5 37 9-47 12-48 (385)
170 1pjq_A CYSG, siroheme synthase 25.9 2.6E+02 0.0087 27.0 9.1 144 256-431 13-166 (457)
171 1j6u_A UDP-N-acetylmuramate-al 25.8 4.5E+02 0.015 25.2 11.2 33 5-42 12-44 (469)
172 1pno_A NAD(P) transhydrogenase 25.6 69 0.0023 26.4 3.9 37 7-45 25-65 (180)
173 4dik_A Flavoprotein; TM0755, e 25.5 47 0.0016 31.9 3.6 46 245-290 254-299 (410)
174 2a33_A Hypothetical protein; s 25.3 3E+02 0.01 23.5 8.4 44 325-368 94-147 (215)
175 3gpi_A NAD-dependent epimerase 25.1 72 0.0025 28.2 4.7 34 1-42 1-34 (286)
176 1d4o_A NADP(H) transhydrogenas 24.9 71 0.0024 26.4 3.9 37 7-45 24-64 (184)
177 3a11_A Translation initiation 24.9 1E+02 0.0034 28.7 5.6 25 95-119 230-254 (338)
178 2x3n_A Probable FAD-dependent 24.6 43 0.0015 31.5 3.1 35 1-41 2-36 (399)
179 3tqr_A Phosphoribosylglycinami 24.4 2E+02 0.0068 24.7 7.1 56 1-72 1-61 (215)
180 2hy5_A Putative sulfurtransfer 24.3 1E+02 0.0035 23.8 4.9 30 17-47 15-45 (130)
181 1f0y_A HCDH, L-3-hydroxyacyl-C 24.2 57 0.002 29.5 3.8 36 1-42 11-46 (302)
182 3h4t_A Glycosyltransferase GTF 24.1 1.9E+02 0.0066 27.0 7.8 35 258-294 3-37 (404)
183 3dhn_A NAD-dependent epimerase 24.1 79 0.0027 26.7 4.6 36 1-42 1-36 (227)
184 3rkr_A Short chain oxidoreduct 24.1 96 0.0033 27.1 5.2 38 1-42 24-61 (262)
185 1hdo_A Biliverdin IX beta redu 24.0 1E+02 0.0034 25.3 5.2 35 1-42 1-35 (206)
186 3rsc_A CALG2; TDP, enediyne, s 23.6 1.3E+02 0.0045 28.1 6.5 36 257-294 22-57 (415)
187 3g0o_A 3-hydroxyisobutyrate de 23.5 52 0.0018 29.8 3.4 33 4-42 6-38 (303)
188 2gk4_A Conserved hypothetical 23.3 58 0.002 28.6 3.4 26 16-44 28-53 (232)
189 2vsy_A XCC0866; transferase, g 23.3 93 0.0032 30.7 5.5 39 4-43 204-246 (568)
190 2fsv_C NAD(P) transhydrogenase 23.3 78 0.0027 26.7 3.9 37 7-45 48-88 (203)
191 1qkk_A DCTD, C4-dicarboxylate 23.1 1.7E+02 0.0058 22.5 6.2 49 359-413 74-122 (155)
192 2l2q_A PTS system, cellobiose- 23.1 95 0.0032 23.3 4.3 38 3-41 2-39 (109)
193 3bfv_A CAPA1, CAPB2, membrane 23.0 83 0.0029 28.0 4.6 42 4-46 80-123 (271)
194 3ip0_A 2-amino-4-hydroxy-6-hyd 22.9 1.1E+02 0.0036 25.1 4.7 31 258-288 2-33 (158)
195 1djl_A Transhydrogenase DIII; 22.7 81 0.0028 26.7 3.9 37 7-45 47-87 (207)
196 3sbx_A Putative uncharacterize 22.1 3.5E+02 0.012 22.6 9.0 42 325-367 93-145 (189)
197 1f9y_A HPPK, protein (6-hydrox 22.0 1.1E+02 0.0039 24.9 4.7 32 258-289 2-34 (158)
198 2qx0_A 7,8-dihydro-6-hydroxyme 21.9 1.5E+02 0.005 24.3 5.4 31 258-288 3-34 (159)
199 3irs_A Uncharacterized protein 21.9 68 0.0023 28.9 3.8 134 270-428 136-279 (291)
200 3r5x_A D-alanine--D-alanine li 21.8 79 0.0027 28.4 4.3 47 3-50 1-51 (307)
201 3cky_A 2-hydroxymethyl glutara 21.7 79 0.0027 28.3 4.2 34 1-41 1-34 (301)
202 1ehi_A LMDDL2, D-alanine:D-lac 21.5 84 0.0029 29.5 4.5 39 1-42 1-44 (377)
203 3f67_A Putative dienelactone h 21.4 1.1E+02 0.0038 25.5 5.0 35 7-42 33-67 (241)
204 2ew2_A 2-dehydropantoate 2-red 20.9 59 0.002 29.2 3.2 32 5-42 3-34 (316)
205 1y56_B Sarcosine oxidase; dehy 20.7 60 0.0021 30.1 3.3 36 1-42 1-36 (382)
206 3trh_A Phosphoribosylaminoimid 20.5 3.6E+02 0.012 22.2 11.8 36 258-295 8-43 (169)
207 4dzz_A Plasmid partitioning pr 20.4 1.1E+02 0.0038 25.2 4.7 35 8-43 4-39 (206)
208 2f00_A UDP-N-acetylmuramate--L 20.3 5.9E+02 0.02 24.6 11.2 32 6-42 20-51 (491)
209 3la6_A Tyrosine-protein kinase 20.1 1E+02 0.0035 27.8 4.6 43 4-47 90-134 (286)
210 3sz8_A 2-dehydro-3-deoxyphosph 20.1 4.8E+02 0.016 23.4 13.8 43 244-294 101-143 (285)
211 2bru_C NAD(P) transhydrogenase 20.1 77 0.0026 26.2 3.2 36 7-44 32-71 (186)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=4.9e-65 Score=510.23 Aligned_cols=383 Identities=25% Similarity=0.356 Sum_probs=315.6
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcCC--cEEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEcCCCCCCCCCC
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRSTG--FKITIANTPLNIQYLQNTISCANPNSPEKFNVNLVELPFCSLDHDLP 81 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~l~ 81 (433)
.++||+++|+|++||++||++||+.|++ +| +.|||++++.+...+.+.... .. .+|+|+.++ ++++
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~-~g~~~~vT~~~t~~~~~~~~~~~~~-~~-----~~i~~~~ip-----dglp 79 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIAT-EAPKVTFSFFCTTTTNDTLFSRSNE-FL-----PNIKYYNVH-----DGLP 79 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHH-HCTTSEEEEEECHHHHHHSCSSSSC-CC-----TTEEEEECC-----CCCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHh-CCCCEEEEEEeCHHHHHhhhccccc-CC-----CCceEEecC-----CCCC
Confidence 3689999999999999999999999999 99 999999998776665542210 11 579999998 5666
Q ss_pred CCCCCCcc--------------------------------EEEEcCCcccHHHHHHHhCCceEEEecchHHHHHHHhhhh
Q 041323 82 PNTENREL--------------------------------VFGSSTFFGWAVDVAKSAGTTNVTFITGGAYGTLAYTSMW 129 (433)
Q Consensus 82 ~~~~~~~~--------------------------------~vv~d~~~~~a~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 129 (433)
++.+...+ |||+|.+++|+..+|+++|||.+.|++++++..+.+++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~ 159 (454)
T 3hbf_A 80 KGYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTD 159 (454)
T ss_dssp TTCCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHH
T ss_pred CCccccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhH
Confidence 65443211 9999999999999999999999999999999888776643
Q ss_pred ccCCCC----CCCCCcc-cCCCCCCCccccccchhhhhhhcCCCChHHHhHHHHhhhhcccceeEecchhccchhhhhcc
Q 041323 130 FNLPHR----KTNSDEF-TLPGFPERCHFHITQLHKYWRMADGSDDWSKFMQPNITQSFQSYEMLCKTAEDIEPGALQWP 204 (433)
Q Consensus 130 ~~~p~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~~~~ 204 (433)
...... ......+ .+||++. ++.++++..+.. ...+.+..++.+..+....++++++||+++||+++++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~ 235 (454)
T 3hbf_A 160 LIREKTGSKEVHDVKSIDVLPGFPE---LKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENEL 235 (454)
T ss_dssp HHHHTCCHHHHTTSSCBCCSTTSCC---BCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHH
T ss_pred HHHhhcCCCccccccccccCCCCCC---cChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHH
Confidence 321110 0111223 3888876 888888877654 334556777778888888999999999999999999988
Q ss_pred cccCCCCeeEeCccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCCCCHHHHHHHHHHHHhC
Q 041323 205 RNYTKLPVWTIGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNTISSSQTMELAIGLEAS 284 (433)
Q Consensus 205 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~ 284 (433)
++.+ ++++.|||++...... ....+++|.+||+.+++++||||||||+...+.+++.+++.+|+++
T Consensus 236 ~~~~-~~v~~vGPl~~~~~~~-------------~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~ 301 (454)
T 3hbf_A 236 NSKF-KLLLNVGPFNLTTPQR-------------KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEEC 301 (454)
T ss_dssp HTTS-SCEEECCCHHHHSCCS-------------CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHH
T ss_pred HhcC-CCEEEECCcccccccc-------------cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhC
Confidence 8765 7999999998643210 1234568999999998899999999999988899999999999999
Q ss_pred CCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhHHHHHhcCCceE
Q 041323 285 AKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALESLSQGLPMI 364 (433)
Q Consensus 285 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~eal~~GvP~i 364 (433)
+++|||+++.. ..+.+|++|.++.. .|+.+.+|+||.+||+|++|++|||||||||++|++++|||+|
T Consensus 302 ~~~flw~~~~~---------~~~~lp~~~~~~~~---~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i 369 (454)
T 3hbf_A 302 GFPFIWSFRGD---------PKEKLPKGFLERTK---TKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMI 369 (454)
T ss_dssp CCCEEEECCSC---------HHHHSCTTHHHHTT---TTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEE
T ss_pred CCeEEEEeCCc---------chhcCCHhHHhhcC---CceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEe
Confidence 99999999864 12347778776654 5677779999999999999999999999999999999999999
Q ss_pred ecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHc
Q 041323 365 GWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIRH 432 (433)
Q Consensus 365 ~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 432 (433)
++|+++||+.||+++++.||+|+.+.. +.++.++|+++|+++|+++ ++++||+||+++++++++
T Consensus 370 ~~P~~~DQ~~Na~~v~~~~g~Gv~l~~---~~~~~~~l~~av~~ll~~~-~~~~~r~~a~~l~~~~~~ 433 (454)
T 3hbf_A 370 SRPFFGDQGLNTILTESVLEIGVGVDN---GVLTKESIKKALELTMSSE-KGGIMRQKIVKLKESAFK 433 (454)
T ss_dssp ECCCSTTHHHHHHHHHTTSCSEEECGG---GSCCHHHHHHHHHHHHSSH-HHHHHHHHHHHHHHHHHH
T ss_pred cCcccccHHHHHHHHHHhhCeeEEecC---CCCCHHHHHHHHHHHHCCC-hHHHHHHHHHHHHHHHHH
Confidence 999999999999999986699999987 7899999999999999875 788999999999999875
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=3e-57 Score=460.29 Aligned_cols=402 Identities=29% Similarity=0.475 Sum_probs=293.3
Q ss_pred CCC-CCcEEEEeCCCCcccHHHHHHHHHHHHhcC-CcEEEEEeCCCc--hhhhhhhccCCCCCCCCCCceeEEEcCCCCC
Q 041323 1 MGS-ENEHTVMLPLMAHGHLIPFLALAKQIHRST-GFKITIANTPLN--IQYLQNTISCANPNSPEKFNVNLVELPFCSL 76 (433)
Q Consensus 1 m~~-~~~~il~~~~~~~GHv~P~l~LA~~L~~~r-Gh~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~ 76 (433)
|+. +++||+++|+|++||++||++||++|++ | ||+|||++++.+ ...+.+... ... .+++|++++....
T Consensus 1 M~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~-r~Gh~Vt~~t~~~~~~~~~~~~~~~-~~~-----~~i~~~~l~~~~~ 73 (480)
T 2vch_A 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVH-LHGLTVTFVIAGEGPPSKAQRTVLD-SLP-----SSISSVFLPPVDL 73 (480)
T ss_dssp -----CCEEEEECCSCHHHHHHHHHHHHHHHH-HHCCEEEEEECCSSSCC-CHHHHHC--CC-----TTEEEEECCCCCC
T ss_pred CCCCCCcEEEEecCcchhHHHHHHHHHHHHHh-CCCCEEEEEECCCcchhhhhhhhcc-ccC-----CCceEEEcCCCCC
Confidence 664 4589999999999999999999999999 9 999999998873 344433110 001 5899999885411
Q ss_pred CCCCCC--CC-------------------C-----CCc-cEEEEcCCcccHHHHHHHhCCceEEEecchHHHHHHHhhhh
Q 041323 77 DHDLPP--NT-------------------E-----NRE-LVFGSSTFFGWAVDVAKSAGTTNVTFITGGAYGTLAYTSMW 129 (433)
Q Consensus 77 ~~~l~~--~~-------------------~-----~~~-~~vv~d~~~~~a~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 129 (433)
. +... .. + ... +|||+|.++.|+..+|+++|||++.+++++++..+.+.+.+
T Consensus 74 ~-~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 152 (480)
T 2vch_A 74 T-DLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLP 152 (480)
T ss_dssp T-TSCTTCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHH
T ss_pred C-CCCCchhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHH
Confidence 0 1100 00 0 122 68999999999999999999999999999987666554322
Q ss_pred c---cCCCCCCC-CCcccCCCCCCCccccccchhhhhhhcCCCChHHHhHHHHhhhhcccceeEecchhccchhhhhccc
Q 041323 130 F---NLPHRKTN-SDEFTLPGFPERCHFHITQLHKYWRMADGSDDWSKFMQPNITQSFQSYEMLCKTAEDIEPGALQWPR 205 (433)
Q Consensus 130 ~---~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~~~~~ 205 (433)
. ........ .....+|+++. +...+++..+.. ........+.+....++...++++||+.+||++.+..+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~ 227 (480)
T 2vch_A 153 KLDETVSCEFRELTEPLMLPGCVP---VAGKDFLDPAQD--RKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQ 227 (480)
T ss_dssp HHHHHCCSCGGGCSSCBCCTTCCC---BCGGGSCGGGSC--TTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHH
T ss_pred HHHhcCCCcccccCCcccCCCCCC---CChHHCchhhhc--CCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHH
Confidence 1 11100000 11134566654 444455544321 112344444555566777889999999999998777665
Q ss_pred c---cCCCCeeEeCccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCCCCHHHHHHHHHHHH
Q 041323 206 N---YTKLPVWTIGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNTISSSQTMELAIGLE 282 (433)
Q Consensus 206 ~---~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~ 282 (433)
+ .+ +++++|||++...... ..+..+.+|.+||+.++++++|||||||+...+.+++.+++++|+
T Consensus 228 ~~~~~~-~~v~~vGpl~~~~~~~------------~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~ 294 (480)
T 2vch_A 228 EPGLDK-PPVYPVGPLVNIGKQE------------AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLA 294 (480)
T ss_dssp SCCTTC-CCEEECCCCCCCSCSC------------C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHH
T ss_pred hcccCC-CcEEEEeccccccccc------------cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHH
Confidence 3 23 6899999998653100 002356789999999888899999999999888899999999999
Q ss_pred hCCCeEEEEEcCCCCCC----CC--cccc-ccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhHHH
Q 041323 283 ASAKSFLWVIRPPVGFD----LR--GEFR-SERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALE 355 (433)
Q Consensus 283 ~~~~~~l~~~~~~~~~~----~~--~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~e 355 (433)
+++++|||+++...... ++ .+.. .+.+|+++.++++ .+++++.+|+||.+||+|++|++|||||||||++|
T Consensus 295 ~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~E 372 (480)
T 2vch_A 295 DSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTK--KRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLE 372 (480)
T ss_dssp HTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTT--TTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHH
T ss_pred hcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhC--CCeEEEeCccCHHHHhCCCCcCeEEecccchhHHH
Confidence 99999999998642000 00 0011 1347888888876 77888877999999999999999999999999999
Q ss_pred HHhcCCceEecccccchhhHHHHH-HHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHc
Q 041323 356 SLSQGLPMIGWPIAAEQTYNSKML-VEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIRH 432 (433)
Q Consensus 356 al~~GvP~i~~P~~~dQ~~na~~~-~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 432 (433)
++++|||+|++|+++||+.||+++ ++ +|+|+.+...+++.+++++|+++|+++|+++ ++++||+||+++++++++
T Consensus 373 al~~GvP~i~~P~~~DQ~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~-~~~~~r~~a~~l~~~~~~ 448 (480)
T 2vch_A 373 SVVSGIPLIAWPLYAEQKMNAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGE-EGKGVRNKMKELKEAACR 448 (480)
T ss_dssp HHHHTCCEEECCCSTTHHHHHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTST-HHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEeccccccchHHHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCc-chHHHHHHHHHHHHHHHH
Confidence 999999999999999999999997 56 7999999762223789999999999999865 666999999999998875
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.1e-56 Score=457.04 Aligned_cols=402 Identities=26% Similarity=0.474 Sum_probs=292.4
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEcCCCCCCCCCCCC
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISCANPNSPEKFNVNLVELPFCSLDHDLPPN 83 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~l~~~ 83 (433)
+++||+++|+|++||++||+.||++|++ |||+|||++++.+...+.+....... ....+++|++++. +++..
T Consensus 7 ~~~~vl~~p~p~~GHi~P~l~La~~L~~-rG~~VT~v~t~~~~~~~~~~~~~~~~--~~~~~i~~~~l~~-----~lp~~ 78 (482)
T 2pq6_A 7 RKPHVVMIPYPVQGHINPLFKLAKLLHL-RGFHITFVNTEYNHKRLLKSRGPKAF--DGFTDFNFESIPD-----GLTPM 78 (482)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEEEHHHHHHHC--------------CEEEEEECC-----CCC--
T ss_pred CCCEEEEecCccchhHHHHHHHHHHHHh-CCCeEEEEeCCchhhhhccccccccc--cCCCceEEEECCC-----CCCCc
Confidence 3579999999999999999999999999 99999999998877666543110000 0003788988873 12110
Q ss_pred --------------------C----------------CCCccEEEEcCCcccHHHHHHHhCCceEEEecchHHHHHHHhh
Q 041323 84 --------------------T----------------ENRELVFGSSTFFGWAVDVAKSAGTTNVTFITGGAYGTLAYTS 127 (433)
Q Consensus 84 --------------------~----------------~~~~~~vv~d~~~~~a~~vA~~lgiP~v~~~~~~~~~~~~~~~ 127 (433)
+ ...-+|||+|.++.|+..+|+++|||++.++++++.....+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~ 158 (482)
T 2pq6_A 79 EGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMH 158 (482)
T ss_dssp -------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTT
T ss_pred ccccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHH
Confidence 0 0112499999999999999999999999999998876655432
Q ss_pred hh-----ccCCCCCCC--C----Cc-c-cCCCCCCCccccccchhhhhhhcCCCChHHHhHHHHhhhhcccceeEecchh
Q 041323 128 MW-----FNLPHRKTN--S----DE-F-TLPGFPERCHFHITQLHKYWRMADGSDDWSKFMQPNITQSFQSYEMLCKTAE 194 (433)
Q Consensus 128 ~~-----~~~p~~~~~--~----~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~ 194 (433)
.+ .+.|..... . +. . .+|+++. ++..+++.++............+.+..+.....+++++||++
T Consensus 159 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~ 235 (482)
T 2pq6_A 159 FRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFN 235 (482)
T ss_dssp HHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCG
T ss_pred HHHHHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChH
Confidence 21 133322110 0 11 1 2345443 444555554433222344455555566667788999999999
Q ss_pred ccchhhhhcccccCCCCeeEeCccCCc-ccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCCCCHHH
Q 041323 195 DIEPGALQWPRNYTKLPVWTIGPLLPQ-SYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNTISSSQ 273 (433)
Q Consensus 195 ~le~~~~~~~~~~~~~~~~~vGp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~ 273 (433)
+||+++++++++.+ +++++|||+... ........ . ...+...+..+.+|.+||+.++++++|||||||+...+.++
T Consensus 236 ~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~-~-~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~ 312 (482)
T 2pq6_A 236 ELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQ-L-DSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQ 312 (482)
T ss_dssp GGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGG-G-CC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHH
T ss_pred HHhHHHHHHHHHhC-CcEEEEcCCcccccccccccc-c-ccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHH
Confidence 99999998888877 899999999753 21100000 0 00000012334579999999888899999999998888888
Q ss_pred HHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhH
Q 041323 274 TMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSA 353 (433)
Q Consensus 274 ~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~ 353 (433)
+.+++++|++++++|||+++... . ......+|+++.+++ +.|+.+.+|+||.++|+|+++++|||||||||+
T Consensus 313 ~~~~~~~l~~~~~~~l~~~~~~~---~--~~~~~~l~~~~~~~~---~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~ 384 (482)
T 2pq6_A 313 LLEFAWGLANCKKSFLWIIRPDL---V--IGGSVIFSSEFTNEI---ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNST 384 (482)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGG---S--TTTGGGSCHHHHHHH---TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHH
T ss_pred HHHHHHHHHhcCCcEEEEEcCCc---c--ccccccCcHhHHHhc---CCCEEEEeecCHHHHhcCCCCCEEEecCCcchH
Confidence 99999999999999999998531 0 000123677776654 457888899999999999999999999999999
Q ss_pred HHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHc
Q 041323 354 LESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIRH 432 (433)
Q Consensus 354 ~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 432 (433)
+|++++|||+|++|+++||+.||+++++.+|+|+.+.. .+++++|+++|+++|+|+ ++++||+||+++++.+++
T Consensus 385 ~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~----~~~~~~l~~~i~~ll~~~-~~~~~r~~a~~l~~~~~~ 458 (482)
T 2pq6_A 385 TESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDT----NVKREELAKLINEVIAGD-KGKKMKQKAMELKKKAEE 458 (482)
T ss_dssp HHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCS----SCCHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECC----CCCHHHHHHHHHHHHcCC-cHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999733699999973 589999999999999887 567899999999999875
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=3.2e-56 Score=449.85 Aligned_cols=385 Identities=21% Similarity=0.353 Sum_probs=289.9
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcCCc--EEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEcCCCCCCCCCC
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRSTGF--KITIANTPLNIQYLQNTISCANPNSPEKFNVNLVELPFCSLDHDLP 81 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh--~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~l~ 81 (433)
.++||+++|+|++||++|+++||++|++ ||| .|||++++.+...+.+...+... .+++|++++. +++
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~-rGh~v~vt~~~t~~~~~~~~~~~~~~~~-----~~i~~~~i~~-----glp 74 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAA-AAPHAVFSFFSTSQSNASIFHDSMHTMQ-----CNIKSYDISD-----GVP 74 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHH-HCTTSEEEEEECHHHHHHHC-------C-----TTEEEEECCC-----CCC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHh-CCCCeEEEEEeCchhHHHhhccccccCC-----CceEEEeCCC-----CCC
Confidence 4689999999999999999999999999 965 56888887655544432111011 5799998872 333
Q ss_pred CCCC--------------------------------CCccEEEEcCCcccHHHHHHHhCCceEEEecchHHHHHHHhhhh
Q 041323 82 PNTE--------------------------------NRELVFGSSTFFGWAVDVAKSAGTTNVTFITGGAYGTLAYTSMW 129 (433)
Q Consensus 82 ~~~~--------------------------------~~~~~vv~d~~~~~a~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 129 (433)
++.+ ..-+|||+|.++.|+..+|+++|||.+.++++++.....+.+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (456)
T 2c1x_A 75 EGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYID 154 (456)
T ss_dssp TTCCCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHH
T ss_pred CcccccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhH
Confidence 3210 01129999999999999999999999999999877655443211
Q ss_pred c-----cCCCC-CCCCCc-ccCCCCCCCccccccchhhhhhhcCCCChHHHhHHHHhhhhcccceeEecchhccchhhhh
Q 041323 130 F-----NLPHR-KTNSDE-FTLPGFPERCHFHITQLHKYWRMADGSDDWSKFMQPNITQSFQSYEMLCKTAEDIEPGALQ 202 (433)
Q Consensus 130 ~-----~~p~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~~ 202 (433)
. ..+.. ...... ..+|+++. ++.++++..+............+.+..+....++++++||+++||+++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~ 231 (456)
T 2c1x_A 155 EIREKIGVSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTN 231 (456)
T ss_dssp HHHHHHCSSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHH
T ss_pred HHHhccCCcccccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHH
Confidence 1 11110 001111 24677765 55566665333222223344455555556677889999999999999888
Q ss_pred cccccCCCCeeEeCccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCCCCHHHHHHHHHHHH
Q 041323 203 WPRNYTKLPVWTIGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNTISSSQTMELAIGLE 282 (433)
Q Consensus 203 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~ 282 (433)
.+++.+ +++++|||+....... ....+.+|.+||+.++++++|||||||+...+.+++.+++++|+
T Consensus 232 ~~~~~~-~~~~~vGpl~~~~~~~-------------~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~ 297 (456)
T 2c1x_A 232 DLKSKL-KTYLNIGPFNLITPPP-------------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALE 297 (456)
T ss_dssp HHHHHS-SCEEECCCHHHHC----------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHH
T ss_pred HHHhcC-CCEEEecCcccCcccc-------------cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHH
Confidence 887766 7899999997543100 11234579999999888899999999999878888999999999
Q ss_pred hCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhHHHHHhcCCc
Q 041323 283 ASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALESLSQGLP 362 (433)
Q Consensus 283 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~eal~~GvP 362 (433)
+.+++|||+++.. ..+.+|+++.++. +.|+.+.+|+||.++|+|+++++|||||||||++|++++|||
T Consensus 298 ~~~~~~lw~~~~~---------~~~~l~~~~~~~~---~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP 365 (456)
T 2c1x_A 298 ASRVPFIWSLRDK---------ARVHLPEGFLEKT---RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVP 365 (456)
T ss_dssp HHTCCEEEECCGG---------GGGGSCTTHHHHH---TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCC
T ss_pred hcCCeEEEEECCc---------chhhCCHHHHhhc---CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCce
Confidence 9999999999854 1234677776554 457888899999999999999999999999999999999999
Q ss_pred eEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHc
Q 041323 363 MIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIRH 432 (433)
Q Consensus 363 ~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 432 (433)
+|++|++.||+.||+++++.||+|+.+.. +.+++++|+++|+++|+|+ ++++||+||+++++.+++
T Consensus 366 ~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~---~~~~~~~l~~~i~~ll~~~-~~~~~r~~a~~l~~~~~~ 431 (456)
T 2c1x_A 366 LICRPFFGDQRLNGRMVEDVLEIGVRIEG---GVFTKSGLMSCFDQILSQE-KGKKLRENLRALRETADR 431 (456)
T ss_dssp EEECCCSTTHHHHHHHHHHTSCCEEECGG---GSCCHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHH
T ss_pred EEecCChhhHHHHHHHHHHHhCeEEEecC---CCcCHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHHHH
Confidence 99999999999999999996699999986 6789999999999999887 578999999999999874
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=2.2e-54 Score=437.48 Aligned_cols=386 Identities=26% Similarity=0.411 Sum_probs=288.0
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcC--CcEEEEEeCCCch-----hhhhhhccCCCCCCCCCCceeEEEcCCCCC
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRST--GFKITIANTPLNI-----QYLQNTISCANPNSPEKFNVNLVELPFCSL 76 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~r--Gh~Vt~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~ 76 (433)
+++||+++|+|++||++||++||++|++ | ||+|||++++.+. ..+.+. . ..+ .+++|+.++...
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~-r~pG~~Vt~v~t~~~~~~~~~~~~~~~-~-~~~-----~~i~~~~lp~~~- 78 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTN-HDKNLYITVFCIKFPGMPFADSYIKSV-L-ASQ-----PQIQLIDLPEVE- 78 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHH-TCTTEEEEEEECCCTTCCCCHHHHHHH-H-CSC-----TTEEEEECCCCC-
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHh-cCCCcEEEEEEcCCcchhhhhhhhhhc-c-cCC-----CCceEEECCCCC-
Confidence 3689999999999999999999999999 9 9999999988763 222221 0 112 589999998541
Q ss_pred CCCCCCC--CC--------------------------CCccEEEEcCCcccHHHHHHHhCCceEEEecchHHHHHHHhhh
Q 041323 77 DHDLPPN--TE--------------------------NRELVFGSSTFFGWAVDVAKSAGTTNVTFITGGAYGTLAYTSM 128 (433)
Q Consensus 77 ~~~l~~~--~~--------------------------~~~~~vv~d~~~~~a~~vA~~lgiP~v~~~~~~~~~~~~~~~~ 128 (433)
++.. .. ..-+|||+|.++.|+..+|+++|||++.++++++.....+.+.
T Consensus 79 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~ 155 (463)
T 2acv_A 79 ---PPPQELLKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSL 155 (463)
T ss_dssp ---CCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHG
T ss_pred ---CCcccccCCccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHH
Confidence 2211 00 0123999999999999999999999999999998876665543
Q ss_pred hccC-CCCCCCCC----cccCCCC-CCCccccccchhhhhhhcCCCChHHHhHHHHhhhhcccceeEecchhccchhhhh
Q 041323 129 WFNL-PHRKTNSD----EFTLPGF-PERCHFHITQLHKYWRMADGSDDWSKFMQPNITQSFQSYEMLCKTAEDIEPGALQ 202 (433)
Q Consensus 129 ~~~~-p~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~~ 202 (433)
+... .......+ ...+|++ +. +...+++..+... ......+.+....++.++++++||+++||++.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~ 229 (463)
T 2acv_A 156 KNRQIEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSID 229 (463)
T ss_dssp GGSCTTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHH
T ss_pred HhhcccCCCCCccccCceeECCCCCCC---CChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHH
Confidence 3221 00000111 2345666 43 4455555443322 2244444555566777889999999999999877
Q ss_pred cccccC--CCCeeEeCccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCC-CCCHHHHHHHHH
Q 041323 203 WPRNYT--KLPVWTIGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQN-TISSSQTMELAI 279 (433)
Q Consensus 203 ~~~~~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~-~~~~~~~~~~~~ 279 (433)
.+.+.. ++++++|||+......... + ..+..+.+|.+||+.++++++|||||||+. ..+.+++.++++
T Consensus 230 ~l~~~~~p~~~v~~vGpl~~~~~~~~~--------~-~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~ 300 (463)
T 2acv_A 230 ALYDHDEKIPPIYAVGPLLDLKGQPNP--------K-LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIAL 300 (463)
T ss_dssp HHHHHCTTSCCEEECCCCCCSSCCCBT--------T-BCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHH
T ss_pred HHHhccccCCcEEEeCCCccccccccc--------c-cccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHH
Confidence 766544 5789999999864310000 0 001235689999999888899999999999 778888999999
Q ss_pred HHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhHHHHHhc
Q 041323 280 GLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALESLSQ 359 (433)
Q Consensus 280 al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~eal~~ 359 (433)
+|++.+++|||+++.+ .+.+|+++.++... +.++.+.+|+||.++|+|+++++|||||||||++|++++
T Consensus 301 ~l~~~~~~~l~~~~~~----------~~~l~~~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~ 369 (463)
T 2acv_A 301 GLKHSGVRFLWSNSAE----------KKVFPEGFLEWMEL-EGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWF 369 (463)
T ss_dssp HHHHHTCEEEEECCCC----------GGGSCTTHHHHHHH-HCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHT
T ss_pred HHHhCCCcEEEEECCC----------cccCChhHHHhhcc-CCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHc
Confidence 9999999999999853 11266777655410 235667789999999999999999999999999999999
Q ss_pred CCceEecccccchhhHHHHH-HHHhcceEEE-ccCCCC--cccHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHHHc
Q 041323 360 GLPMIGWPIAAEQTYNSKML-VEEMGMAVEL-TRGVQS--TIVGHDVKNVIEMVMD-EAGKGQEMKAKAEKIGRQIRH 432 (433)
Q Consensus 360 GvP~i~~P~~~dQ~~na~~~-~~~~G~g~~l-~~~~~~--~~~~~~l~~ai~~vl~-~~~~~~~~~~~a~~l~~~~~~ 432 (433)
|||+|++|+++||+.||+++ ++ +|+|+.+ ...+.+ .++.++|+++|+++|+ ++ +||+||+++++.+++
T Consensus 370 GvP~i~~P~~~dQ~~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~----~~r~~a~~l~~~~~~ 442 (463)
T 2acv_A 370 GVPILTWPIYAEQQLNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS----IVHKKVQEMKEMSRN 442 (463)
T ss_dssp TCCEEECCCSTTHHHHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTC----THHHHHHHHHHHHHH
T ss_pred CCCeeeccchhhhHHHHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhccH----HHHHHHHHHHHHHHH
Confidence 99999999999999999996 67 7999999 321114 6899999999999996 34 799999999998874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=4.7e-41 Score=336.74 Aligned_cols=355 Identities=18% Similarity=0.212 Sum_probs=244.6
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEcCCCCCCCCC----
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISCANPNSPEKFNVNLVELPFCSLDHDL---- 80 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~l---- 80 (433)
++||+|++++++||++|+++||++|++ +||+|+|++++.+.+.+.+ .|++|++++..- ..+.
T Consensus 12 ~~~Il~~~~~~~GHv~p~l~la~~L~~-~Gh~V~~~~~~~~~~~~~~------------~g~~~~~~~~~~-~~~~~~~~ 77 (424)
T 2iya_A 12 PRHISFFNIPGHGHVNPSLGIVQELVA-RGHRVSYAITDEFAAQVKA------------AGATPVVYDSIL-PKESNPEE 77 (424)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH------------HTCEEEECCCCS-CCTTCTTC
T ss_pred cceEEEEeCCCCcccchHHHHHHHHHH-CCCeEEEEeCHHHHHHHHh------------CCCEEEecCccc-cccccchh
Confidence 579999999999999999999999999 9999999999988877777 688898877320 0010
Q ss_pred --CCCCC-----------------------CCccEEEEcCCcccHHHHHHHhCCceEEEecchHHHHHHHhhhhccCCCC
Q 041323 81 --PPNTE-----------------------NRELVFGSSTFFGWAVDVAKSAGTTNVTFITGGAYGTLAYTSMWFNLPHR 135 (433)
Q Consensus 81 --~~~~~-----------------------~~~~~vv~d~~~~~a~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~ 135 (433)
+.+.. ...++||+|.++.|+..+|+++|||++.+++.+.........+....+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~ 157 (424)
T 2iya_A 78 SWPEDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPT 157 (424)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCC
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccccccc
Confidence 00000 00129999998889999999999999999877642111000000000000
Q ss_pred CCCCCcccCC-CC--CCCccc--c-----ccchhhhhhhcCCCChHHHhHHHHhhhhcccceeEecchhccchhhhhccc
Q 041323 136 KTNSDEFTLP-GF--PERCHF--H-----ITQLHKYWRMADGSDDWSKFMQPNITQSFQSYEMLCKTAEDIEPGALQWPR 205 (433)
Q Consensus 136 ~~~~~~~~~~-~~--~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~~~~~ 205 (433)
.........| +. ...... . ...+..++....... .........+.+++++.++++++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~~~l~~~~~~l~~~~----- 225 (424)
T 2iya_A 158 ADRGEEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDT-------PATEFLIAPNRCIVALPRTFQIKG----- 225 (424)
T ss_dssp C---------------------HHHHHHHHHHHHHHHHHTTCCS-------CHHHHHHCCSSEEESSCTTTSTTG-----
T ss_pred cccccccccccccccchhhhccchhHHHHHHHHHHHHHHcCCCC-------CHHHhccCCCcEEEEcchhhCCCc-----
Confidence 0000000000 00 000000 0 000111111000000 000111245678889988887652
Q ss_pred ccCCCCeeEeCccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCCCCHHHHHHHHHHHHhCC
Q 041323 206 NYTKLPVWTIGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNTISSSQTMELAIGLEASA 285 (433)
Q Consensus 206 ~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~ 285 (433)
..+++++++|||++.... +..+|++..+++++|||++||......+.+.++++++++.+
T Consensus 226 ~~~~~~~~~vGp~~~~~~---------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~ 284 (424)
T 2iya_A 226 DTVGDNYTFVGPTYGDRS---------------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLD 284 (424)
T ss_dssp GGCCTTEEECCCCCCCCG---------------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCS
T ss_pred cCCCCCEEEeCCCCCCcc---------------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCC
Confidence 346788999999874321 11246665556789999999998656788889999999989
Q ss_pred CeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhHHHHHhcCCceEe
Q 041323 286 KSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALESLSQGLPMIG 365 (433)
Q Consensus 286 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~eal~~GvP~i~ 365 (433)
++++|.++... + .+.+. ..+.|+.+.+|+||.++|+|++ +||||||+||++|++++|+|+|+
T Consensus 285 ~~~~~~~g~~~------~--~~~~~--------~~~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~ 346 (424)
T 2iya_A 285 WHVVLSVGRFV------D--PADLG--------EVPPNVEVHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVA 346 (424)
T ss_dssp SEEEEECCTTS------C--GGGGC--------SCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEE
T ss_pred cEEEEEECCcC------C--hHHhc--------cCCCCeEEecCCCHHHHHhhCC--EEEECCchhHHHHHHHcCCCEEE
Confidence 99999988641 0 01110 0156899999999999999999 59999999999999999999999
Q ss_pred cccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHc
Q 041323 366 WPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIRH 432 (433)
Q Consensus 366 ~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 432 (433)
+|...||+.||+++++ +|+|+.+.. +.++.++|+++|+++|+|+ +++++++++++.+++
T Consensus 347 ~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 347 VPQIAEQTMNAERIVE-LGLGRHIPR---DQVTAEKLREAVLAVASDP----GVAERLAAVRQEIRE 405 (424)
T ss_dssp CCCSHHHHHHHHHHHH-TTSEEECCG---GGCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT
T ss_pred ecCccchHHHHHHHHH-CCCEEEcCc---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh
Confidence 9999999999999999 599999986 6789999999999999988 799999999888764
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=3.7e-41 Score=334.40 Aligned_cols=324 Identities=14% Similarity=0.156 Sum_probs=210.1
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEcCCCCCC------
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISCANPNSPEKFNVNLVELPFCSLD------ 77 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~------ 77 (433)
++|||||+++|++||++|+++||++|++ |||+|||++++.+....+ .++.+.++......
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~-rGh~Vt~~t~~~~~~~~~-------------~g~~~~~~~~~~~~~~~~~~ 86 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRA-LGHEVRYATGGDIRAVAE-------------AGLCAVDVSPGVNYAKLFVP 86 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEECSSTHHHHT-------------TTCEEEESSTTCCSHHHHSC
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHH-CCCEEEEEeCcchhhHHh-------------cCCeeEecCCchhHhhhccc
Confidence 4699999999999999999999999999 999999999987765443 46666655422100
Q ss_pred C--CCCCCCCCC------------------------------ccEEEEcCCcccHHHHHHHhCCceEEEecchHHHHHHH
Q 041323 78 H--DLPPNTENR------------------------------ELVFGSSTFFGWAVDVAKSAGTTNVTFITGGAYGTLAY 125 (433)
Q Consensus 78 ~--~l~~~~~~~------------------------------~~~vv~d~~~~~a~~vA~~lgiP~v~~~~~~~~~~~~~ 125 (433)
. ......... .|+||+|.+..++..+|+++|||++.+...+.......
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~ 166 (400)
T 4amg_A 87 DDTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGL 166 (400)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHH
T ss_pred cccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeecccccccccch
Confidence 0 000000000 01999999999999999999999998765543211100
Q ss_pred hhhhccCCCCCCCCCcccCCCCCCCccccccchhhhhhhcCCCChHHHhHHHHhhhhcccceeEecch-hccchhhhhcc
Q 041323 126 TSMWFNLPHRKTNSDEFTLPGFPERCHFHITQLHKYWRMADGSDDWSKFMQPNITQSFQSYEMLCKTA-EDIEPGALQWP 204 (433)
Q Consensus 126 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~-~~le~~~~~~~ 204 (433)
.... .+.+.. ...+................ ..+. ...+
T Consensus 167 ~~~~-------------------------~~~l~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 205 (400)
T 4amg_A 167 GALI-------------------------RRAMSK-------------DYERHGVTGEPTGSVRLTTTPPSVE---ALLP 205 (400)
T ss_dssp HHHH-------------------------HHHTHH-------------HHHHTTCCCCCSCEEEEECCCHHHH---HTSC
T ss_pred hhHH-------------------------HHHHHH-------------HHHHhCCCcccccchhhcccCchhh---ccCc
Confidence 0000 000000 00000000000000000000 0000 0000
Q ss_pred cccCCCCeeEeCccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCCCC--HHHHHHHHHHHH
Q 041323 205 RNYTKLPVWTIGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNTIS--SSQTMELAIGLE 282 (433)
Q Consensus 205 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~--~~~~~~~~~al~ 282 (433)
.....+..+.+.+.... ....+.+|++..+++++|||||||+.... .+.+.+++++++
T Consensus 206 ~~~~~~~~~~~~~~~~~--------------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~ 265 (400)
T 4amg_A 206 EDRRSPGAWPMRYVPYN--------------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVA 265 (400)
T ss_dssp GGGCCTTCEECCCCCCC--------------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGG
T ss_pred ccccCCcccCccccccc--------------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhh
Confidence 00011222222222111 12233458888888899999999987543 356888999999
Q ss_pred hCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhHHHHHhcCCc
Q 041323 283 ASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALESLSQGLP 362 (433)
Q Consensus 283 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~eal~~GvP 362 (433)
+.+.+++|.+++.. ......+ +.|+.+.+|+||.++|+|++ +||||||+||++|++++|||
T Consensus 266 ~~~~~~v~~~~~~~------~~~~~~~-----------~~~v~~~~~~p~~~lL~~~~--~~v~h~G~~s~~Eal~~GvP 326 (400)
T 4amg_A 266 DVDAEFVLTLGGGD------LALLGEL-----------PANVRVVEWIPLGALLETCD--AIIHHGGSGTLLTALAAGVP 326 (400)
T ss_dssp GSSSEEEEECCTTC------CCCCCCC-----------CTTEEEECCCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCC
T ss_pred ccCceEEEEecCcc------ccccccC-----------CCCEEEEeecCHHHHhhhhh--heeccCCccHHHHHHHhCCC
Confidence 99999999987642 1111112 56899999999999999988 59999999999999999999
Q ss_pred eEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHcC
Q 041323 363 MIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIRHQ 433 (433)
Q Consensus 363 ~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~ 433 (433)
+|++|+++||+.||+++++. |+|+.++. .+.+++ +|+++|+|+ +||+||++++++++++
T Consensus 327 ~v~~P~~~dQ~~na~~v~~~-G~g~~l~~---~~~~~~----al~~lL~d~----~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 327 QCVIPHGSYQDTNRDVLTGL-GIGFDAEA---GSLGAE----QCRRLLDDA----GLREAALRVRQEMSEM 385 (400)
T ss_dssp EEECCC---CHHHHHHHHHH-TSEEECCT---TTCSHH----HHHHHHHCH----HHHHHHHHHHHHHHTS
T ss_pred EEEecCcccHHHHHHHHHHC-CCEEEcCC---CCchHH----HHHHHHcCH----HHHHHHHHHHHHHHcC
Confidence 99999999999999999995 99999987 556654 677888998 8999999999998864
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=4.4e-40 Score=328.88 Aligned_cols=344 Identities=13% Similarity=0.099 Sum_probs=236.3
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEcCCCCCC--CCCCCC
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISCANPNSPEKFNVNLVELPFCSLD--HDLPPN 83 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~--~~l~~~ 83 (433)
|||+|++.++.||++|+++||++|++ |||+|+|++++.+...+.+ .|++|+.++..... ......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~-~Gh~V~~~~~~~~~~~v~~------------~g~~~~~i~~~~~~~~~~~~~~ 67 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRD-LGADVRMCAPPDCAERLAE------------VGVPHVPVGPSARAPIQRAKPL 67 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH------------TTCCEEECCC-------CCSCC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHH-CCCeEEEEcCHHHHHHHHH------------cCCeeeeCCCCHHHHhhccccc
Confidence 69999999999999999999999999 9999999999887777776 68888887743100 000000
Q ss_pred C----------------------CCCccEEEEcC-Cccc--HHHHHHHhCCceEEEecchHHHHHHHhhhhccCCCCCCC
Q 041323 84 T----------------------ENRELVFGSST-FFGW--AVDVAKSAGTTNVTFITGGAYGTLAYTSMWFNLPHRKTN 138 (433)
Q Consensus 84 ~----------------------~~~~~~vv~d~-~~~~--a~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~ 138 (433)
. ....++||+|. +..| +..+|+++|||++.+++.+..... .+.|....
T Consensus 68 ~~~~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~------~~~p~~~~- 140 (415)
T 1iir_A 68 TAEDVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS------PYYPPPPL- 140 (415)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC------SSSCCCC--
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC------cccCCccC-
Confidence 0 00112899997 5668 899999999999999887643211 11111100
Q ss_pred CCcccCCCCCCCccccccchhhhhhhcCCCChHHHhHHH------------HhhhhcccceeEecchhccchhhhhcccc
Q 041323 139 SDEFTLPGFPERCHFHITQLHKYWRMADGSDDWSKFMQP------------NITQSFQSYEMLCKTAEDIEPGALQWPRN 206 (433)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~t~~~le~~~~~~~~~ 206 (433)
. +.+++ + ...+.+...+..........+.+.+ ..+..... .+++++++.+++. .+.
T Consensus 141 -~-~~~~~---~--~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~----~~~ 208 (415)
T 1iir_A 141 -G-EPSTQ---D--TIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPL----QPT 208 (415)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCC----CCC
T ss_pred -C-ccccc---h--HHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCC----Ccc
Confidence 0 11111 0 0000010000000000000000000 01111222 5788888877751 123
Q ss_pred cCCCCeeEeCccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCCCCHHHHHHHHHHHHhCCC
Q 041323 207 YTKLPVWTIGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNTISSSQTMELAIGLEASAK 286 (433)
Q Consensus 207 ~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~ 286 (433)
.+ ++++|||+.... .+..+.++.+||+.++ ++|||++||+. ...+.+..+++++++.+.
T Consensus 209 ~~--~~~~vG~~~~~~----------------~~~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~ 267 (415)
T 1iir_A 209 DL--DAVQTGAWILPD----------------ERPLSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAIDAIRAHGR 267 (415)
T ss_dssp SS--CCEECCCCCCCC----------------CCCCCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHHHHHHHTTC
T ss_pred cC--CeEeeCCCccCc----------------ccCCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHHHHHHHCCC
Confidence 33 789999998643 2345678999998753 58999999997 566778889999999999
Q ss_pred eEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhHHHHHhcCCceEec
Q 041323 287 SFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALESLSQGLPMIGW 366 (433)
Q Consensus 287 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~eal~~GvP~i~~ 366 (433)
+++|++|... .....+ +.|+.+.+|+||.++|++++ +||||||+||++|++++|+|+|++
T Consensus 268 ~~v~~~g~~~-------~~~~~~-----------~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~ 327 (415)
T 1iir_A 268 RVILSRGWAD-------LVLPDD-----------GADCFAIGEVNHQVLFGRVA--AVIHHGGAGTTHVAARAGAPQILL 327 (415)
T ss_dssp CEEECTTCTT-------CCCSSC-----------GGGEEECSSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEEC
T ss_pred eEEEEeCCCc-------ccccCC-----------CCCEEEeCcCChHHHHhhCC--EEEeCCChhHHHHHHHcCCCEEEC
Confidence 9999988541 100111 45788999999999997777 699999999999999999999999
Q ss_pred ccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 041323 367 PIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIR 431 (433)
Q Consensus 367 P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 431 (433)
|++.||+.||+++++ +|+|+.+.. .+++.++|+++|+++ +|+ +++++++++++.++
T Consensus 328 p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~ 383 (415)
T 1iir_A 328 PQMADQPYYAGRVAE-LGVGVAHDG---PIPTFDSLSAALATA-LTP----ETHARATAVAGTIR 383 (415)
T ss_dssp CCSTTHHHHHHHHHH-HTSEEECSS---SSCCHHHHHHHHHHH-TSH----HHHHHHHHHHHHSC
T ss_pred CCCCccHHHHHHHHH-CCCcccCCc---CCCCHHHHHHHHHHH-cCH----HHHHHHHHHHHHHh
Confidence 999999999999999 499999986 678999999999999 887 89999999888764
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=6.6e-39 Score=320.48 Aligned_cols=344 Identities=13% Similarity=0.085 Sum_probs=239.3
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEcCCCCCCCCCCC---
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISCANPNSPEKFNVNLVELPFCSLDHDLPP--- 82 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~l~~--- 82 (433)
|||+|++.++.||++|+++||++|++ +||+|+|++++.+.+.+.+ .|++|++++.... +.+..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~-~Gh~V~~~~~~~~~~~v~~------------~g~~~~~~~~~~~-~~~~~~~~ 66 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKA-LGVQTRMCAPPAAEERLAE------------VGVPHVPVGLPQH-MMLQEGMP 66 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH------------HTCCEEECSCCGG-GCCCTTSC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHH-CCCeEEEEeCHHHHHHHHH------------cCCeeeecCCCHH-HHHhhccc
Confidence 68999999999999999999999999 9999999999887777776 6888888774310 00100
Q ss_pred -CC----------------------CCCccEEEEcC-Cccc--HHHHHHHhCCceEEEecchHHHHHHHhhhhccCCCCC
Q 041323 83 -NT----------------------ENRELVFGSST-FFGW--AVDVAKSAGTTNVTFITGGAYGTLAYTSMWFNLPHRK 136 (433)
Q Consensus 83 -~~----------------------~~~~~~vv~d~-~~~~--a~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~ 136 (433)
.. ....|+||+|. +..+ +..+|+++|||++.+++.+.... ..+.| ..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~------~~~~p-~~ 139 (416)
T 1rrv_A 67 PPPPEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA------SPHLP-PA 139 (416)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC------CSSSC-CC
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC------CcccC-CC
Confidence 00 00113899996 4556 88899999999999887764321 01111 00
Q ss_pred CCCCcccC-CC-CCCCccccccchhhhhhhcCCCChHHHhHH--------HHhhhhcccceeEecchhccchhhhhcccc
Q 041323 137 TNSDEFTL-PG-FPERCHFHITQLHKYWRMADGSDDWSKFMQ--------PNITQSFQSYEMLCKTAEDIEPGALQWPRN 206 (433)
Q Consensus 137 ~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~t~~~le~~~~~~~~~ 206 (433)
. . +.+ ++ +.++.... .....+... .......... ...+..... .+++++.++++++ +.
T Consensus 140 ~--~-~~~~~~r~~n~~~~~--~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~-----~~ 207 (416)
T 1rrv_A 140 Y--D-EPTTPGVTDIRVLWE--ERAARFADR-YGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL-----QP 207 (416)
T ss_dssp B--C-SCCCTTCCCHHHHHH--HHHHHHHHH-HHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC-----CS
T ss_pred C--C-CCCCchHHHHHHHHH--HHHHHHHHH-hHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC-----CC
Confidence 0 0 111 11 11100000 000000000 0000000000 011112233 6788888877754 22
Q ss_pred cCCCCeeEeCccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCC-CCHHHHHHHHHHHHhCC
Q 041323 207 YTKLPVWTIGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNT-ISSSQTMELAIGLEASA 285 (433)
Q Consensus 207 ~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~~~al~~~~ 285 (433)
.+ ++++|||+.... .+..+.++.+|++.++ ++|||++||+.. ...+.+.++++++++.+
T Consensus 208 ~~--~~~~vG~~~~~~----------------~~~~~~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~ 267 (416)
T 1rrv_A 208 DV--DAVQTGAWLLSD----------------ERPLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAVEAIRAQG 267 (416)
T ss_dssp SC--CCEECCCCCCCC----------------CCCCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHHHHHHHTT
T ss_pred CC--CeeeECCCccCc----------------cCCCCHHHHHHHhcCC--CeEEEecCCCCccChHHHHHHHHHHHHHCC
Confidence 33 789999998653 2345778999998753 689999999974 34566888999999999
Q ss_pred CeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhHHHHHhcCCceEe
Q 041323 286 KSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALESLSQGLPMIG 365 (433)
Q Consensus 286 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~eal~~GvP~i~ 365 (433)
++++|++|... .....+ +.|+.+.+|+||.++|++++ +||||||+||++||+++|+|+|+
T Consensus 268 ~~~v~~~g~~~-------~~~~~~-----------~~~v~~~~~~~~~~ll~~~d--~~v~~~G~~t~~Ea~~~G~P~i~ 327 (416)
T 1rrv_A 268 RRVILSRGWTE-------LVLPDD-----------RDDCFAIDEVNFQALFRRVA--AVIHHGSAGTEHVATRAGVPQLV 327 (416)
T ss_dssp CCEEEECTTTT-------CCCSCC-----------CTTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEE
T ss_pred CeEEEEeCCcc-------ccccCC-----------CCCEEEeccCChHHHhccCC--EEEecCChhHHHHHHHcCCCEEE
Confidence 99999988641 100111 56888999999999997777 69999999999999999999999
Q ss_pred cccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 041323 366 WPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIR 431 (433)
Q Consensus 366 ~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 431 (433)
+|++.||+.||+++++. |+|+.+.. .+.+.++|+++|+++ +|+ +|++++++++++++
T Consensus 328 ~p~~~dQ~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~ 384 (416)
T 1rrv_A 328 IPRNTDQPYFAGRVAAL-GIGVAHDG---PTPTFESLSAALTTV-LAP----ETRARAEAVAGMVL 384 (416)
T ss_dssp CCCSBTHHHHHHHHHHH-TSEEECSS---SCCCHHHHHHHHHHH-TSH----HHHHHHHHHTTTCC
T ss_pred ccCCCCcHHHHHHHHHC-CCccCCCC---CCCCHHHHHHHHHHh-hCH----HHHHHHHHHHHHHh
Confidence 99999999999999994 99999986 678999999999999 887 89999998877654
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.2e-37 Score=310.29 Aligned_cols=337 Identities=12% Similarity=0.091 Sum_probs=232.7
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEcCCCCCCC-C-CCCC
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISCANPNSPEKFNVNLVELPFCSLDH-D-LPPN 83 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~-~-l~~~ 83 (433)
|||+|++.++.||++|++.||++|++ |||+|++++++.+.+.++. .|++|.+++...... . ....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~-~Gh~V~v~~~~~~~~~v~~------------~g~~~~~l~~~~~~~~~~~~~~ 67 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRE-LGADARMCLPPDYVERCAE------------VGVPMVPVGRAVRAGAREPGEL 67 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHH-TTCCEEEEECGGGHHHHHH------------TTCCEEECSSCSSGGGSCTTCC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHH-CCCeEEEEeCHHHHHHHHH------------cCCceeecCCCHHHHhccccCC
Confidence 68999999999999999999999999 9999999999888888887 788999887431100 0 0000
Q ss_pred CCC---------------------CccEEEEcCCcccH---HHHHHHhCCceEEEecchHHHHHHHhhhhccCCCCCCCC
Q 041323 84 TEN---------------------RELVFGSSTFFGWA---VDVAKSAGTTNVTFITGGAYGTLAYTSMWFNLPHRKTNS 139 (433)
Q Consensus 84 ~~~---------------------~~~~vv~d~~~~~a---~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~ 139 (433)
... ..|+||+|..+.++ ..+|+++|||++.+...+....+.....
T Consensus 68 ~~~~~~~~~~~~~~~~~~l~~~~~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~----------- 136 (404)
T 3h4t_A 68 PPGAAEVVTEVVAEWFDKVPAAIEGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQA----------- 136 (404)
T ss_dssp CTTCGGGHHHHHHHHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHH-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHH-----------
Confidence 000 12388888655544 6889999999999887764211000000
Q ss_pred CcccCCCCCCCccccccchhhhh---hhcCCCChHHHhHHHHhhhhcccceeEecchhccchhhhhcccccCCCCeeEeC
Q 041323 140 DEFTLPGFPERCHFHITQLHKYW---RMADGSDDWSKFMQPNITQSFQSYEMLCKTAEDIEPGALQWPRNYTKLPVWTIG 216 (433)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~~~~~~~~~~~~~~vG 216 (433)
..+.... ..++.+...+ +........ ....... ..+..+.+..+.+.+ ...++++++++|
T Consensus 137 ----~~~~~~~--~~~~~~~~~~~~~~~~lgl~~~----~~~~~~~-~~~~~l~~~~~~l~p------~~~~~~~~~~~G 199 (404)
T 3h4t_A 137 ----ERDMYNQ--GADRLFGDAVNSHRASIGLPPV----EHLYDYG-YTDQPWLAADPVLSP------LRPTDLGTVQTG 199 (404)
T ss_dssp ----HHHHHHH--HHHHHHHHHHHHHHHHTTCCCC----CCHHHHH-HCSSCEECSCTTTSC------CCTTCCSCCBCC
T ss_pred ----HHHHHHH--HHHHHhHHHHHHHHHHcCCCCC----cchhhcc-ccCCeEEeeCcceeC------CCCCCCCeEEeC
Confidence 0000000 0000000000 000000000 0000000 011223343333322 224567888999
Q ss_pred ccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCCC
Q 041323 217 PLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPPV 296 (433)
Q Consensus 217 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~ 296 (433)
++.... ...+++++.+|++.. +++|||++||+.. ..+.+..+++++++.++++||+++...
T Consensus 200 ~~~~~~----------------~~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~ 260 (404)
T 3h4t_A 200 AWILPD----------------QRPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAG 260 (404)
T ss_dssp CCCCCC----------------CCCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTT
T ss_pred ccccCC----------------CCCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 887543 235678899999854 4689999999987 667788899999999999999988641
Q ss_pred CCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhHHHHHhcCCceEecccccchhhHH
Q 041323 297 GFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALESLSQGLPMIGWPIAAEQTYNS 376 (433)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na 376 (433)
. ... .. +.|+.+.+|+||.++|++++ +||||||+||+.|++++|+|+|++|++.||+.||
T Consensus 261 -------~--~~~-~~--------~~~v~~~~~~~~~~ll~~~d--~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na 320 (404)
T 3h4t_A 261 -------L--GRI-DE--------GDDCLVVGEVNHQVLFGRVA--AVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYA 320 (404)
T ss_dssp -------C--CCS-SC--------CTTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred -------c--ccc-cC--------CCCEEEecCCCHHHHHhhCc--EEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHH
Confidence 1 111 10 56899999999999999888 6999999999999999999999999999999999
Q ss_pred HHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 041323 377 KMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIR 431 (433)
Q Consensus 377 ~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 431 (433)
.++++. |+|+.+.. .+++.++|.++|+++++ + +|+++++++++.++
T Consensus 321 ~~~~~~-G~g~~l~~---~~~~~~~l~~ai~~ll~-~----~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 321 GRVADL-GVGVAHDG---PTPTVESLSAALATALT-P----GIRARAAAVAGTIR 366 (404)
T ss_dssp HHHHHH-TSEEECSS---SSCCHHHHHHHHHHHTS-H----HHHHHHHHHHTTCC
T ss_pred HHHHHC-CCEeccCc---CCCCHHHHHHHHHHHhC-H----HHHHHHHHHHHHHh
Confidence 999995 99999987 67899999999999998 7 79999999887654
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=2e-35 Score=294.75 Aligned_cols=349 Identities=14% Similarity=0.148 Sum_probs=236.6
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEcCCCCCCCCC---
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISCANPNSPEKFNVNLVELPFCSLDHDL--- 80 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~l--- 80 (433)
.++||+|+++++.||++|+++||++|++ +||+|+|++++.+.+.+++ .|++|..++.+......
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~-~Gh~V~v~~~~~~~~~~~~------------~G~~~~~~~~~~~~~~~~~~ 85 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVR-RGHRVSYVTAGGFAEPVRA------------AGATVVPYQSEIIDADAAEV 85 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHH------------TTCEEEECCCSTTTCCHHHH
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHH-CCCEEEEEeCHHHHHHHHh------------cCCEEEeccccccccccchh
Confidence 3579999999999999999999999999 9999999999888888887 78899988742110000
Q ss_pred --CCC------------------------CCCCccEEEEc-CCcccHHHHHHHhCCceEEEecchHHHHHHHhhhhccCC
Q 041323 81 --PPN------------------------TENRELVFGSS-TFFGWAVDVAKSAGTTNVTFITGGAYGTLAYTSMWFNLP 133 (433)
Q Consensus 81 --~~~------------------------~~~~~~~vv~d-~~~~~a~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~p 133 (433)
... .+...|+||+| ....++..+|+++|||++.+.+...... .+.......+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~-~~~~~~~~~~ 164 (415)
T 3rsc_A 86 FGSDDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE-HYSFSQDMVT 164 (415)
T ss_dssp HHSSSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS-SCCHHHHHHH
T ss_pred hccccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC-cccccccccc
Confidence 000 00012388999 7778899999999999999864432100 0000000000
Q ss_pred CCCCCCCcccCCCCCCCccccccchhhhhhhcCCCChHHHhHHHHhhhhcccceeEecchhccchhhhhcccccCCCCee
Q 041323 134 HRKTNSDEFTLPGFPERCHFHITQLHKYWRMADGSDDWSKFMQPNITQSFQSYEMLCKTAEDIEPGALQWPRNYTKLPVW 213 (433)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~~~~~~~~~~~~~ 213 (433)
......+.........+...+........ ..... ....+..+..+ ++.++.....++.++.
T Consensus 165 --------~~~~~~p~~~~~~~~~~~~~~~~~g~~~~----~~~~~--~~~~~~~l~~~-----~~~~~~~~~~~~~~~~ 225 (415)
T 3rsc_A 165 --------LAGTIDPLDLPVFRDTLRDLLAEHGLSRS----VVDCW--NHVEQLNLVFV-----PKAFQIAGDTFDDRFV 225 (415)
T ss_dssp --------HHTCCCGGGCHHHHHHHHHHHHHTTCCCC----HHHHH--TCCCSEEEESS-----CTTTSTTGGGCCTTEE
T ss_pred --------ccccCChhhHHHHHHHHHHHHHHcCCCCC----hhhhh--cCCCCeEEEEc-----CcccCCCcccCCCceE
Confidence 00000000000000011111111100000 00000 01113344433 3334444566778899
Q ss_pred EeCccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEc
Q 041323 214 TIGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIR 293 (433)
Q Consensus 214 ~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~ 293 (433)
++||++.... +..+|....+++++|||++||......+.+..+++++++.+++++|.++
T Consensus 226 ~vGp~~~~~~---------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g 284 (415)
T 3rsc_A 226 FVGPCFDDRR---------------------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLG 284 (415)
T ss_dssp ECCCCCCCCG---------------------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECT
T ss_pred EeCCCCCCcc---------------------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeC
Confidence 9999875431 1123444445577999999999876677888999999998899999988
Q ss_pred CCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhHHHHHhcCCceEecccccchh
Q 041323 294 PPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALESLSQGLPMIGWPIAAEQT 373 (433)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~ 373 (433)
... + .+.+. ..+.|+.+.+|+|+.++|++++ +||||||+||+.|++++|+|+|++|...||+
T Consensus 285 ~~~------~--~~~l~--------~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~ 346 (415)
T 3rsc_A 285 GQV------D--PAALG--------DLPPNVEAHRWVPHVKVLEQAT--VCVTHGGMGTLMEALYWGRPLVVVPQSFDVQ 346 (415)
T ss_dssp TTS------C--GGGGC--------CCCTTEEEESCCCHHHHHHHEE--EEEESCCHHHHHHHHHTTCCEEECCCSGGGH
T ss_pred CCC------C--hHHhc--------CCCCcEEEEecCCHHHHHhhCC--EEEECCcHHHHHHHHHhCCCEEEeCCcchHH
Confidence 541 0 11111 0156899999999999999988 5999999999999999999999999999999
Q ss_pred hHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHc
Q 041323 374 YNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIRH 432 (433)
Q Consensus 374 ~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 432 (433)
.||.++++. |+|+.+.. ++++.++|.++|+++++|+ +++++++++++.+.+
T Consensus 347 ~~a~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~ 397 (415)
T 3rsc_A 347 PMARRVDQL-GLGAVLPG---EKADGDTLLAAVGAVAADP----ALLARVEAMRGHVRR 397 (415)
T ss_dssp HHHHHHHHH-TCEEECCG---GGCCHHHHHHHHHHHHTCH----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCEEEccc---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh
Confidence 999999995 99999987 6789999999999999998 788888888887654
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.3e-34 Score=287.13 Aligned_cols=348 Identities=16% Similarity=0.158 Sum_probs=233.6
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEcCCCCCCCCCCCCC
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISCANPNSPEKFNVNLVELPFCSLDHDLPPNT 84 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~l~~~~ 84 (433)
.+||+|+++++.||++|++.||++|++ +||+|+|++++.+.+.+.. .|++|..++.+..........
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~-~GheV~v~~~~~~~~~~~~------------~G~~~~~~~~~~~~~~~~~~~ 70 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELAR-RGHRITYVTTPLFADEVKA------------AGAEVVLYKSEFDTFHVPEVV 70 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHHHH------------TTCEEEECCCGGGTSSSSSSS
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHh-CCCEEEEEcCHHHHHHHHH------------cCCEEEecccccccccccccc
Confidence 349999999999999999999999999 9999999999888788877 788998887421100000000
Q ss_pred -----------------------------CCCccEEEEc-CCcccHHHHHHHhCCceEEEecchHHHHHHHhhhhccCCC
Q 041323 85 -----------------------------ENRELVFGSS-TFFGWAVDVAKSAGTTNVTFITGGAYGTLAYTSMWFNLPH 134 (433)
Q Consensus 85 -----------------------------~~~~~~vv~d-~~~~~a~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~ 134 (433)
+...|+|++| .+..++..+|+++|||++.+.+....... +.......+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~~~- 148 (402)
T 3ia7_A 71 KQEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLFKELWK- 148 (402)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHHHHHHH-
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-ccccccccc-
Confidence 0011289999 77888999999999999988644321100 000000000
Q ss_pred CCCCCCcccCCCCCCCccccccchhhhhhhcCCCChHHHhHHHHhhhhcccceeEecchhccchhhhhcccccCCCCeeE
Q 041323 135 RKTNSDEFTLPGFPERCHFHITQLHKYWRMADGSDDWSKFMQPNITQSFQSYEMLCKTAEDIEPGALQWPRNYTKLPVWT 214 (433)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~~~~~~~~~~~~~~ 214 (433)
......+.........+...+....... ....... ...+..+..+. +.++.....++.++.+
T Consensus 149 -------~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~--~~~~~~l~~~~-----~~~~~~~~~~~~~~~~ 210 (402)
T 3ia7_A 149 -------SNGQRHPADVEAVHSVLVDLLGKYGVDT----PVKEYWD--EIEGLTIVFLP-----KSFQPFAETFDERFAF 210 (402)
T ss_dssp -------HHTCCCGGGSHHHHHHHHHHHHTTTCCS----CHHHHHT--CCCSCEEESSC-----GGGSTTGGGCCTTEEE
T ss_pred -------cccccChhhHHHHHHHHHHHHHHcCCCC----Chhhhhc--CCCCeEEEEcC-----hHhCCccccCCCCeEE
Confidence 0000000000000001111111110000 0000000 01133333333 3334445566788999
Q ss_pred eCccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcC
Q 041323 215 IGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRP 294 (433)
Q Consensus 215 vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~ 294 (433)
+||++.... +...|+...+++++|||++||......+.+..+++++++.+.+++|.++.
T Consensus 211 vGp~~~~~~---------------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 269 (402)
T 3ia7_A 211 VGPTLTGRD---------------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGG 269 (402)
T ss_dssp CCCCCCC-------------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCT
T ss_pred eCCCCCCcc---------------------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 999875431 11134444455679999999998766778889999999988999999885
Q ss_pred CCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhHHHHHhcCCceEeccc-ccchh
Q 041323 295 PVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALESLSQGLPMIGWPI-AAEQT 373 (433)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~eal~~GvP~i~~P~-~~dQ~ 373 (433)
+. + .+.+.+ .+.|+.+.+|+|+.++|++++ +||||||+||+.|++++|+|+|++|. ..||+
T Consensus 270 ~~------~--~~~~~~--------~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~ 331 (402)
T 3ia7_A 270 FL------D--PAVLGP--------LPPNVEAHQWIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVLVPHFATEAA 331 (402)
T ss_dssp TS------C--GGGGCS--------CCTTEEEESCCCHHHHHTTEE--EEEECCCHHHHHHHHHTTCCEEECGGGCGGGH
T ss_pred cC------C--hhhhCC--------CCCcEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEeCCCcccHH
Confidence 41 0 111111 156899999999999999988 59999999999999999999999999 99999
Q ss_pred hHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHc
Q 041323 374 YNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIRH 432 (433)
Q Consensus 374 ~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 432 (433)
.||.++++. |+|+.+.. ++++.++|.++|+++++|+ +++++++++++.+.+
T Consensus 332 ~~a~~~~~~-g~g~~~~~---~~~~~~~l~~~~~~ll~~~----~~~~~~~~~~~~~~~ 382 (402)
T 3ia7_A 332 PSAERVIEL-GLGSVLRP---DQLEPASIREAVERLAADS----AVRERVRRMQRDILS 382 (402)
T ss_dssp HHHHHHHHT-TSEEECCG---GGCSHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHc-CCEEEccC---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHhh
Confidence 999999995 99999987 6789999999999999998 788888888877654
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=2.1e-34 Score=290.02 Aligned_cols=339 Identities=14% Similarity=0.115 Sum_probs=219.5
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEcCCCCCC-------
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISCANPNSPEKFNVNLVELPFCSLD------- 77 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~------- 77 (433)
.|||+|++.++.||++|+++||++|++ +||+|+|++++.+.+.+.. .|++|++++.....
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~-~GheV~~~~~~~~~~~v~~------------~G~~~~~i~~~~~~~~~~~~~ 86 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRA-AGHEVRVVASPALTEDITA------------AGLTAVPVGTDVDLVDFMTHA 86 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHH-TTCEEEEEECGGGHHHHHT------------TTCCEEECSCCCCHHHHHHHT
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHH-CCCeEEEEeCchhHHHHHh------------CCCceeecCCccchHHHhhhh
Confidence 479999999999999999999999999 9999999999887777776 68888887743100
Q ss_pred ----------CCC----CC-------------------C-CC---C-----------CccEEEEcCCcccHHHHHHHhCC
Q 041323 78 ----------HDL----PP-------------------N-TE---N-----------RELVFGSSTFFGWAVDVAKSAGT 109 (433)
Q Consensus 78 ----------~~l----~~-------------------~-~~---~-----------~~~~vv~d~~~~~a~~vA~~lgi 109 (433)
.++ +. . .. . ..|+||+|.++.++..+|+.+||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lgi 166 (441)
T 2yjn_A 87 GHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTGT 166 (441)
T ss_dssp THHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHTC
T ss_pred hcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcCC
Confidence 000 10 0 00 0 01399999887889999999999
Q ss_pred ceEEEecchHHHHHHH---hhhhccCCCCCCCCCcccCCCCCCCccccccchhhhhhhcCCCChHHHhHHHHhhhhcccc
Q 041323 110 TNVTFITGGAYGTLAY---TSMWFNLPHRKTNSDEFTLPGFPERCHFHITQLHKYWRMADGSDDWSKFMQPNITQSFQSY 186 (433)
Q Consensus 110 P~v~~~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (433)
|++.+...+....... .......+. ..+.. ...+.+..+........ +... ....+
T Consensus 167 P~v~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~---~~~~~l~~~~~~~g~~~----~~~~----~~~~~ 225 (441)
T 2yjn_A 167 PHARLLWGPDITTRARQNFLGLLPDQPE----------EHRED---PLAEWLTWTLEKYGGPA----FDEE----VVVGQ 225 (441)
T ss_dssp CEEEECSSCCHHHHHHHHHHHHGGGSCT----------TTCCC---HHHHHHHHHHHHTTCCC----CCGG----GTSCS
T ss_pred CEEEEecCCCcchhhhhhhhhhcccccc----------ccccc---hHHHHHHHHHHHcCCCC----CCcc----ccCCC
Confidence 9999865543321111 100011110 00000 00000111110000000 0000 00112
Q ss_pred eeEecchhccchhhhhcccccCCCCeeEeCccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCC
Q 041323 187 EMLCKTAEDIEPGALQWPRNYTKLPVWTIGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQ 266 (433)
Q Consensus 187 ~~l~~t~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~ 266 (433)
..+..+...++++ . .++. ..+++... ..+.++.+|++..+++++|||++||+
T Consensus 226 ~~l~~~~~~~~~~-----~-~~~~--~~~~~~~~--------------------~~~~~~~~~l~~~~~~~~v~v~~Gs~ 277 (441)
T 2yjn_A 226 WTIDPAPAAIRLD-----T-GLKT--VGMRYVDY--------------------NGPSVVPEWLHDEPERRRVCLTLGIS 277 (441)
T ss_dssp SEEECSCGGGSCC-----C-CCCE--EECCCCCC--------------------CSSCCCCGGGSSCCSSCEEEEEC---
T ss_pred eEEEecCccccCC-----C-CCCC--CceeeeCC--------------------CCCcccchHhhcCCCCCEEEEECCCC
Confidence 2333322222211 1 1210 11222110 01223557988666678999999999
Q ss_pred CCC---CHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcce
Q 041323 267 NTI---SSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGA 343 (433)
Q Consensus 267 ~~~---~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~ 343 (433)
... ..+.+..+++++.+.+++++|+++... .+.+.. .+.|+.+.+|+||.++|++++ +
T Consensus 278 ~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~---------~~~l~~--------~~~~v~~~~~~~~~~ll~~ad--~ 338 (441)
T 2yjn_A 278 SRENSIGQVSIEELLGAVGDVDAEIIATFDAQQ---------LEGVAN--------IPDNVRTVGFVPMHALLPTCA--A 338 (441)
T ss_dssp -------CCSTTTTHHHHHTSSSEEEECCCTTT---------TSSCSS--------CCSSEEECCSCCHHHHGGGCS--E
T ss_pred cccccChHHHHHHHHHHHHcCCCEEEEEECCcc---------hhhhcc--------CCCCEEEecCCCHHHHHhhCC--E
Confidence 753 235577788999988999999988541 111211 156899999999999998887 6
Q ss_pred EEecCCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHH
Q 041323 344 FLSYCGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKA 423 (433)
Q Consensus 344 ~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a 423 (433)
||||||+||++|++++|+|+|++|+..||+.||.++++. |+|+.+.. ++++.++|.++|+++++|+ .+++++
T Consensus 339 ~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~ 410 (441)
T 2yjn_A 339 TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPV---PELTPDQLRESVKRVLDDP----AHRAGA 410 (441)
T ss_dssp EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCT---TTCCHHHHHHHHHHHHHCH----HHHHHH
T ss_pred EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEccc---ccCCHHHHHHHHHHHhcCH----HHHHHH
Confidence 999999999999999999999999999999999999995 99999986 6789999999999999998 899999
Q ss_pred HHHHHHHHc
Q 041323 424 EKIGRQIRH 432 (433)
Q Consensus 424 ~~l~~~~~~ 432 (433)
+++++.+++
T Consensus 411 ~~~~~~~~~ 419 (441)
T 2yjn_A 411 ARMRDDMLA 419 (441)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 998887754
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.3e-33 Score=283.02 Aligned_cols=345 Identities=17% Similarity=0.152 Sum_probs=227.8
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEcCCCCCCCCC----
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISCANPNSPEKFNVNLVELPFCSLDHDL---- 80 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~l---- 80 (433)
.+||++++.++.||++|++.||++|++ +||+|+++++....+.+.+ .|++++.++.... ...
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~-~G~~V~~~~~~~~~~~~~~------------~g~~~~~~~~~~~-~~~~~~~ 72 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVA-RGHRVTYAIPPVFADKVAA------------TGPRPVLYHSTLP-GPDADPE 72 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHT------------TSCEEEECCCCSC-CTTSCGG
T ss_pred cceEEEEeCCCCccccchHHHHHHHHH-CCCeEEEEeCHHHHHHHHh------------CCCEEEEcCCcCc-ccccccc
Confidence 469999999999999999999999999 9999999998887666666 6888887773200 010
Q ss_pred --CCCC-----------------------CCCccEEEEcCCcccHHHHHHHhCCceEEEecchHHHHHHHhhhhccCCCC
Q 041323 81 --PPNT-----------------------ENRELVFGSSTFFGWAVDVAKSAGTTNVTFITGGAYGTLAYTSMWFNLPHR 135 (433)
Q Consensus 81 --~~~~-----------------------~~~~~~vv~d~~~~~a~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~ 135 (433)
..+. +...++||+|....++..+|+++|||++.+++...........+.....
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~-- 150 (430)
T 2iyf_A 73 AWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMW-- 150 (430)
T ss_dssp GGCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHH--
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchh--
Confidence 0000 0011299999877789999999999999987654310000000000000
Q ss_pred CCCCCcccCCCCCCCccccccchhhhhhhcCCCChHHHhHHHHhhhhcccceeEecchhccchhhhhcccccCCCC-eeE
Q 041323 136 KTNSDEFTLPGFPERCHFHITQLHKYWRMADGSDDWSKFMQPNITQSFQSYEMLCKTAEDIEPGALQWPRNYTKLP-VWT 214 (433)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~~~~~~~~~~~-~~~ 214 (433)
......++.. .....+..++....... . ..+.....+.+++++...+++.. ..++++ +++
T Consensus 151 ---~~~~~~~~~~----~~~~~~~~~~~~~g~~~----~---~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~v~~ 211 (430)
T 2iyf_A 151 ---REPRQTERGR----AYYARFEAWLKENGITE----H---PDTFASHPPRSLVLIPKALQPHA-----DRVDEDVYTF 211 (430)
T ss_dssp ---HHHHHSHHHH----HHHHHHHHHHHHTTCCS----C---HHHHHHCCSSEEECSCGGGSTTG-----GGSCTTTEEE
T ss_pred ---hhhccchHHH----HHHHHHHHHHHHhCCCC----C---HHHHhcCCCcEEEeCcHHhCCCc-----ccCCCccEEE
Confidence 0000000000 00000111111100000 0 00111235678888877766542 235567 999
Q ss_pred eCccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCCCCHHHHHHHHHHHHhC-CCeEEEEEc
Q 041323 215 IGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNTISSSQTMELAIGLEAS-AKSFLWVIR 293 (433)
Q Consensus 215 vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~-~~~~l~~~~ 293 (433)
|||.+.... +..+|.+..+++++|||++||......+.+.++++++++. +++++|++|
T Consensus 212 vG~~~~~~~---------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G 270 (430)
T 2iyf_A 212 VGACQGDRA---------------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIG 270 (430)
T ss_dssp CCCCC--------------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC
T ss_pred eCCcCCCCC---------------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeC
Confidence 998764321 0113544445567999999999854567788899999885 889999988
Q ss_pred CCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhHHHHHhcCCceEecccccchh
Q 041323 294 PPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALESLSQGLPMIGWPIAAEQT 373 (433)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~ 373 (433)
... + .+.+. ..+.|+.+.+|+||.++|++++ +||+|||+||++||+++|+|+|++|..+||.
T Consensus 271 ~~~------~--~~~l~--------~~~~~v~~~~~~~~~~~l~~ad--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~ 332 (430)
T 2iyf_A 271 RKV------T--PAELG--------ELPDNVEVHDWVPQLAILRQAD--LFVTHAGAGGSQEGLATATPMIAVPQAVDQF 332 (430)
T ss_dssp ---------C--GGGGC--------SCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHH
T ss_pred CCC------C--hHHhc--------cCCCCeEEEecCCHHHHhhccC--EEEECCCccHHHHHHHhCCCEEECCCccchH
Confidence 541 0 01110 0146899999999999999999 5999999999999999999999999999999
Q ss_pred hHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 041323 374 YNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIR 431 (433)
Q Consensus 374 ~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 431 (433)
.|+.++++. |+|+.+.. +.++.++|+++|.++++|+ .+++++.++++.+.
T Consensus 333 ~~a~~~~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~ 382 (430)
T 2iyf_A 333 GNADMLQGL-GVARKLAT---EEATADLLRETALALVDDP----EVARRLRRIQAEMA 382 (430)
T ss_dssp HHHHHHHHT-TSEEECCC---C-CCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCEEEcCC---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH
Confidence 999999994 99999986 6778999999999999988 67777766666543
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=3.6e-33 Score=275.67 Aligned_cols=318 Identities=12% Similarity=0.095 Sum_probs=224.1
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEcCCCC--CC-----C
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISCANPNSPEKFNVNLVELPFCS--LD-----H 78 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~--~~-----~ 78 (433)
|||++++.++.||++|+++||++|++ +||+|++++++...+.+.. .|++++.++... .. .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~-~Gh~V~~~~~~~~~~~~~~------------~g~~~~~~~~~~~~~~~~~~~~ 67 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARN-AGHQVVMAANQDMGPVVTG------------VGLPAVATTDLPIRHFITTDRE 67 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH------------TTCCEEESCSSCHHHHHHBCTT
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHH-CCCEEEEEeCHHHHHHHHh------------CCCEEEEeCCcchHHHHhhhcc
Confidence 68999999999999999999999999 9999999998877666666 678888776421 00 0
Q ss_pred CCC----CC------C-CC--------------------CccEEEEcCCcccHHHHHHHhCCceEEEecchHHHHHHHhh
Q 041323 79 DLP----PN------T-EN--------------------RELVFGSSTFFGWAVDVAKSAGTTNVTFITGGAYGTLAYTS 127 (433)
Q Consensus 79 ~l~----~~------~-~~--------------------~~~~vv~d~~~~~a~~vA~~lgiP~v~~~~~~~~~~~~~~~ 127 (433)
+++ .. . .. ..++|++|.+..++..+|+.+|||++.+...+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~------- 140 (384)
T 2p6p_A 68 GRPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD------- 140 (384)
T ss_dssp SCBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-------
T ss_pred cCccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc-------
Confidence 010 10 0 00 0129999987788889999999999987533210
Q ss_pred hhccCCCCCCCCCcccCCCCCCCccccccchhhhhhhcCCCChHHHhHHHHh-hhhcccceeEecchhccchhhhhcccc
Q 041323 128 MWFNLPHRKTNSDEFTLPGFPERCHFHITQLHKYWRMADGSDDWSKFMQPNI-TQSFQSYEMLCKTAEDIEPGALQWPRN 206 (433)
Q Consensus 128 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~t~~~le~~~~~~~~~ 206 (433)
..+ +. ..+... ......+.. ......+.+++++...++++.
T Consensus 141 ----------------~~~------~~-~~~~~~---------~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~------ 182 (384)
T 2p6p_A 141 ----------------ADG------IH-PGADAE---------LRPELSELGLERLPAPDLFIDICPPSLRPAN------ 182 (384)
T ss_dssp ----------------CTT------TH-HHHHHH---------THHHHHHTTCSSCCCCSEEEECSCGGGSCTT------
T ss_pred ----------------cch------hh-HHHHHH---------HHHHHHHcCCCCCCCCCeEEEECCHHHCCCC------
Confidence 000 00 000000 000000000 000114567777776665431
Q ss_pred cCC-CCeeEeCccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCCC-----CHHHHHHHHHH
Q 041323 207 YTK-LPVWTIGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNTI-----SSSQTMELAIG 280 (433)
Q Consensus 207 ~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~-----~~~~~~~~~~a 280 (433)
.++ .++.++++ . .+.++.+|++..+++++|||++||.... +.+.+.+++++
T Consensus 183 ~~~~~~~~~~~~---~--------------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~a 239 (384)
T 2p6p_A 183 AAPARMMRHVAT---S--------------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKD 239 (384)
T ss_dssp SCCCEECCCCCC---C--------------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHH
T ss_pred CCCCCceEecCC---C--------------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHH
Confidence 111 12233311 0 1123457887755567999999999864 44678889999
Q ss_pred HHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhHHHHHhcC
Q 041323 281 LEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALESLSQG 360 (433)
Q Consensus 281 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~eal~~G 360 (433)
+++.+++++|++++. ..+.+. ..+.|+.+ +|+||.++|++++ +||||||+||++||+++|
T Consensus 240 l~~~~~~~~~~~g~~-------------~~~~l~----~~~~~v~~-~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G 299 (384)
T 2p6p_A 240 LVRWDVELIVAAPDT-------------VAEALR----AEVPQARV-GWTPLDVVAPTCD--LLVHHAGGVSTLTGLSAG 299 (384)
T ss_dssp HHTTTCEEEEECCHH-------------HHHHHH----HHCTTSEE-ECCCHHHHGGGCS--EEEECSCTTHHHHHHHTT
T ss_pred HhcCCcEEEEEeCCC-------------CHHhhC----CCCCceEE-cCCCHHHHHhhCC--EEEeCCcHHHHHHHHHhC
Confidence 999999999987732 001111 11578999 9999999998887 699999999999999999
Q ss_pred CceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHc
Q 041323 361 LPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIRH 432 (433)
Q Consensus 361 vP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 432 (433)
+|+|++|...||+.||.++++. |+|+.+.. +..+.++|.++|+++|+|+ .++++++++++.+++
T Consensus 300 ~P~v~~p~~~dq~~~a~~~~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 300 VPQLLIPKGSVLEAPARRVADY-GAAIALLP---GEDSTEAIADSCQELQAKD----TYARRAQDLSREISG 363 (384)
T ss_dssp CCEEECCCSHHHHHHHHHHHHH-TSEEECCT---TCCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT
T ss_pred CCEEEccCcccchHHHHHHHHC-CCeEecCc---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh
Confidence 9999999999999999999995 99999986 6789999999999999998 899999999988875
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1.8e-32 Score=272.08 Aligned_cols=324 Identities=13% Similarity=0.113 Sum_probs=204.5
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEcCCCCCC------
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISCANPNSPEKFNVNLVELPFCSLD------ 77 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~------ 77 (433)
.+|||+|++.++.||++|++.||++|.+ +||+|++++++...+.+.. .|+.+..++.....
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~-~GheV~v~~~~~~~~~~~~------------~G~~~~~~~~~~~~~~~~~~ 80 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRA-AGHEVLVAASENMGPTVTG------------AGLPFAPTCPSLDMPEVLSW 80 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEEEGGGHHHHHH------------TTCCEEEEESSCCHHHHHSB
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHH-CCCEEEEEcCHHHHHHHHh------------CCCeeEecCCccchHhhhhh
Confidence 4699999999999999999999999999 9999999998877777777 68888877621000
Q ss_pred --CCCCCCCC-------------------------------CCccEEEEcCCcccHHHHHHHhCCceEEEecchHHHHHH
Q 041323 78 --HDLPPNTE-------------------------------NRELVFGSSTFFGWAVDVAKSAGTTNVTFITGGAYGTLA 124 (433)
Q Consensus 78 --~~l~~~~~-------------------------------~~~~~vv~d~~~~~a~~vA~~lgiP~v~~~~~~~~~~~~ 124 (433)
.+.+.... ...|+|++|....++..+|+.+|||++.+..........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~ 160 (398)
T 4fzr_A 81 DREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELI 160 (398)
T ss_dssp CTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHH
T ss_pred hccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhh
Confidence 00000000 001289999877888889999999999875443111000
Q ss_pred HhhhhccCCCCCCCCCcccCCCCCCCccccccchhhhhhhcCCCChHHHhHHHHhhhhcccceeEecchhccchhhhhcc
Q 041323 125 YTSMWFNLPHRKTNSDEFTLPGFPERCHFHITQLHKYWRMADGSDDWSKFMQPNITQSFQSYEMLCKTAEDIEPGALQWP 204 (433)
Q Consensus 125 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~~~~ 204 (433)
.... .+.+...+..+.. .........+..+...+. ..
T Consensus 161 ~~~~--------------------------~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~~~~-----~~ 197 (398)
T 4fzr_A 161 KSAG--------------------------VGELAPELAELGL------------TDFPDPLLSIDVCPPSME-----AQ 197 (398)
T ss_dssp HHHH--------------------------HHHTHHHHHTTTC------------SSCCCCSEEEECSCGGGC-------
T ss_pred hHHH--------------------------HHHHHHHHHHcCC------------CCCCCCCeEEEeCChhhC-----CC
Confidence 0000 0000000000000 000001112222211111 11
Q ss_pred cccCCCCeeEeCccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCCC--------CHHHHHH
Q 041323 205 RNYTKLPVWTIGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNTI--------SSSQTME 276 (433)
Q Consensus 205 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~--------~~~~~~~ 276 (433)
......++.++++. ....++.+|+...+++++|||++||.... ..+.+..
T Consensus 198 ~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~ 255 (398)
T 4fzr_A 198 PKPGTTKMRYVPYN----------------------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQA 255 (398)
T ss_dssp --CCCEECCCCCCC----------------------CSSCCCCHHHHSCCSSCEEECC----------------CCSHHH
T ss_pred CCCCCCCeeeeCCC----------------------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHH
Confidence 10000011112110 01223456777656677999999999643 2345788
Q ss_pred HHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhHHHH
Q 041323 277 LAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALES 356 (433)
Q Consensus 277 ~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~ea 356 (433)
+++++.+.+++++|+.+... .+.+. ..+.|+.+.+|+|+.++|++++ +||||||.||+.||
T Consensus 256 ~~~al~~~~~~~v~~~~~~~---------~~~l~--------~~~~~v~~~~~~~~~~ll~~ad--~~v~~gG~~t~~Ea 316 (398)
T 4fzr_A 256 LSQELPKLGFEVVVAVSDKL---------AQTLQ--------PLPEGVLAAGQFPLSAIMPACD--VVVHHGGHGTTLTC 316 (398)
T ss_dssp HHHHGGGGTCEEEECCCC-------------------------CCTTEEEESCCCHHHHGGGCS--EEEECCCHHHHHHH
T ss_pred HHHHHHhCCCEEEEEeCCcc---------hhhhc--------cCCCcEEEeCcCCHHHHHhhCC--EEEecCCHHHHHHH
Confidence 99999988999999887541 11111 1156899999999999999988 59999999999999
Q ss_pred HhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHc
Q 041323 357 LSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIRH 432 (433)
Q Consensus 357 l~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 432 (433)
+++|+|+|++|...||..|+.++++. |+|+.+.. +++++++|.++|+++++|+ .+++++++.++.+.+
T Consensus 317 ~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~---~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 317 LSEGVPQVSVPVIAEVWDSARLLHAA-GAGVEVPW---EQAGVESVLAACARIRDDS----SYVGNARRLAAEMAT 384 (398)
T ss_dssp HHTTCCEEECCCSGGGHHHHHHHHHT-TSEEECC----------CHHHHHHHHHHCT----HHHHHHHHHHHHHTT
T ss_pred HHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCc---ccCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHHc
Confidence 99999999999999999999999995 99999987 6778999999999999999 889999888887754
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.97 E-value=6.9e-31 Score=260.67 Aligned_cols=317 Identities=12% Similarity=0.139 Sum_probs=210.9
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEcCCCCCCCC----
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISCANPNSPEKFNVNLVELPFCSLDHD---- 79 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~---- 79 (433)
.+|||+|++.++.||++|++.||++|.+ +||+|+++++ .+.+.+.. .|+.+..++.......
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~-~GheV~v~~~-~~~~~~~~------------~G~~~~~~~~~~~~~~~~~~ 84 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRT-AGHDVLIAVA-EHADRAAA------------AGLEVVDVAPDYSAVKVFEQ 84 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEES-SCHHHHHT------------TTCEEEESSTTCCHHHHHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHH-CCCEEEEecc-chHHHHHh------------CCCeeEecCCccCHHHHhhh
Confidence 3589999999999999999999999999 9999999999 77777777 7899998873210000
Q ss_pred --------------CC-CCCCC-----------------------CccEEEEcCCcccHHHHHHHhCCceEEEecchHHH
Q 041323 80 --------------LP-PNTEN-----------------------RELVFGSSTFFGWAVDVAKSAGTTNVTFITGGAYG 121 (433)
Q Consensus 80 --------------l~-~~~~~-----------------------~~~~vv~d~~~~~a~~vA~~lgiP~v~~~~~~~~~ 121 (433)
.+ ..... ..|+|++|..+.++..+|+.+|||++.+.......
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~ 164 (398)
T 3oti_A 85 VAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT 164 (398)
T ss_dssp HHHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC
T ss_pred cccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc
Confidence 00 00000 01288999888888899999999999765331100
Q ss_pred HHHHhhhhccCCCCCCCCCcccCCCCCCCccccccchhhhhhhcCCCChHHHhHHHHhhhhcccceeEecchhccchhhh
Q 041323 122 TLAYTSMWFNLPHRKTNSDEFTLPGFPERCHFHITQLHKYWRMADGSDDWSKFMQPNITQSFQSYEMLCKTAEDIEPGAL 201 (433)
Q Consensus 122 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~ 201 (433)
.. . ......+ ....+.+...........+......+
T Consensus 165 -----------------------~~------~-~~~~~~~---------l~~~~~~~~~~~~~~~~~~~~~~~~~----- 200 (398)
T 3oti_A 165 -----------------------RG------M-HRSIASF---------LTDLMDKHQVSLPEPVATIESFPPSL----- 200 (398)
T ss_dssp -----------------------TT------H-HHHHHTT---------CHHHHHHTTCCCCCCSEEECSSCGGG-----
T ss_pred -----------------------cc------h-hhHHHHH---------HHHHHHHcCCCCCCCCeEEEeCCHHH-----
Confidence 00 0 0000000 00000000000001112222111111
Q ss_pred hcccccCCCCeeEeCccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCCC--CHHHHHHHHH
Q 041323 202 QWPRNYTKLPVWTIGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNTI--SSSQTMELAI 279 (433)
Q Consensus 202 ~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~--~~~~~~~~~~ 279 (433)
.........++.++ |. ..+.++.+|+...+++++|||++||.... ..+.+.++++
T Consensus 201 ~~~~~~~~~~~~~~-~~----------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~ 257 (398)
T 3oti_A 201 LLEAEPEGWFMRWV-PY----------------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIA 257 (398)
T ss_dssp GTTSCCCSBCCCCC-CC----------------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHH
T ss_pred CCCCCCCCCCcccc-CC----------------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHH
Confidence 11110000111111 10 01122334666555678999999999642 4566888999
Q ss_pred HHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhHHHHHhc
Q 041323 280 GLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALESLSQ 359 (433)
Q Consensus 280 al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~eal~~ 359 (433)
++++.+++++|+.++.. .+.+.. .+.|+.+.+|+|+.++|++++ +||||||+||+.||+++
T Consensus 258 ~l~~~~~~~v~~~g~~~---------~~~l~~--------~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Eal~~ 318 (398)
T 3oti_A 258 AAGEVDADFVLALGDLD---------ISPLGT--------LPRNVRAVGWTPLHTLLRTCT--AVVHHGGGGTVMTAIDA 318 (398)
T ss_dssp HHHTSSSEEEEECTTSC---------CGGGCS--------CCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHH
T ss_pred HHHcCCCEEEEEECCcC---------hhhhcc--------CCCcEEEEccCCHHHHHhhCC--EEEECCCHHHHHHHHHh
Confidence 99999999999988641 111110 156899999999999999988 59999999999999999
Q ss_pred CCceEecccccchhhHH--HHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHc
Q 041323 360 GLPMIGWPIAAEQTYNS--KMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIRH 432 (433)
Q Consensus 360 GvP~i~~P~~~dQ~~na--~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 432 (433)
|+|+|++|+..||..|| .++++. |+|+.+.. ++.+++.|+ ++++|+ .++++++++++.+.+
T Consensus 319 G~P~v~~p~~~dq~~~a~~~~~~~~-g~g~~~~~---~~~~~~~l~----~ll~~~----~~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 319 GIPQLLAPDPRDQFQHTAREAVSRR-GIGLVSTS---DKVDADLLR----RLIGDE----SLRTAAREVREEMVA 381 (398)
T ss_dssp TCCEEECCCTTCCSSCTTHHHHHHH-TSEEECCG---GGCCHHHHH----HHHHCH----HHHHHHHHHHHHHHT
T ss_pred CCCEEEcCCCchhHHHHHHHHHHHC-CCEEeeCC---CCCCHHHHH----HHHcCH----HHHHHHHHHHHHHHh
Confidence 99999999999999999 999995 99999987 667777777 788888 789999888888764
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.97 E-value=6.1e-30 Score=253.02 Aligned_cols=323 Identities=13% Similarity=0.092 Sum_probs=210.6
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEc-CCCCCCC-C---
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISCANPNSPEKFNVNLVEL-PFCSLDH-D--- 79 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l-~~~~~~~-~--- 79 (433)
+|||+|++.++.||++|++.||++|++ +||+|++++++...+.+.. .|+++..+ +.+...+ .
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~-~GheV~v~~~~~~~~~~~~------------~g~~~~~~~~~~~~~~~~~~~ 67 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQA-SGHEVLIAAPPELQATAHG------------AGLTTAGIRGNDRTGDTGGTT 67 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHH-TTCEEEEEECHHHHHHHHH------------BTCEEEEC-------------
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHH-CCCEEEEecChhhHHHHHh------------CCCceeeecCCccchhhhhhh
Confidence 589999999999999999999999999 9999999998777666776 68888877 3210000 0
Q ss_pred -CCCC------------------------------CC--------CCccEEEEcCCcccHHHHHHHhCCceEEEecchHH
Q 041323 80 -LPPN------------------------------TE--------NRELVFGSSTFFGWAVDVAKSAGTTNVTFITGGAY 120 (433)
Q Consensus 80 -l~~~------------------------------~~--------~~~~~vv~d~~~~~a~~vA~~lgiP~v~~~~~~~~ 120 (433)
.+.. .. ...|+|++|....++..+|+.+|||++.+......
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 147 (391)
T 3tsa_A 68 QLRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDP 147 (391)
T ss_dssp -CCSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCC
T ss_pred cccccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcc
Confidence 0000 00 01238999987777888899999999987533211
Q ss_pred HHHHHhhhhccCCCCCCCCCcccCCCCCCCccccccchhhhhhhcCCCChHHHhHHHHhhh-hcccceeEecchhccchh
Q 041323 121 GTLAYTSMWFNLPHRKTNSDEFTLPGFPERCHFHITQLHKYWRMADGSDDWSKFMQPNITQ-SFQSYEMLCKTAEDIEPG 199 (433)
Q Consensus 121 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~t~~~le~~ 199 (433)
.. . ........++ ...+.+.... ....+.++..+..+++
T Consensus 148 ~~--------------------------~---~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 187 (391)
T 3tsa_A 148 TA--------------------------G---PFSDRAHELL---------DPVCRHHGLTGLPTPELILDPCPPSLQ-- 187 (391)
T ss_dssp TT--------------------------T---HHHHHHHHHH---------HHHHHHTTSSSSCCCSEEEECSCGGGS--
T ss_pred cc--------------------------c---cccchHHHHH---------HHHHHHcCCCCCCCCceEEEecChhhc--
Confidence 00 0 0000000000 0000000000 0001222222222221
Q ss_pred hhhcccccCCCCeeEeCccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCC--CC-HHHHHH
Q 041323 200 ALQWPRNYTKLPVWTIGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNT--IS-SSQTME 276 (433)
Q Consensus 200 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~--~~-~~~~~~ 276 (433)
........++.++ |.. .+..+..|+...+++++|||++||... .. .+.+..
T Consensus 188 ---~~~~~~~~~~~~~-p~~----------------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~ 241 (391)
T 3tsa_A 188 ---ASDAPQGAPVQYV-PYN----------------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRA 241 (391)
T ss_dssp ---CTTSCCCEECCCC-CCC----------------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHH
T ss_pred ---CCCCCccCCeeee-cCC----------------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHH
Confidence 1111111112222 110 111233577665667899999999843 23 666788
Q ss_pred HHHHHHhC-CCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhHHH
Q 041323 277 LAIGLEAS-AKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALE 355 (433)
Q Consensus 277 ~~~al~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~e 355 (433)
++++ ++. +++++|..++.. .+.+.. .+.|+.+.+|+|+.++|++++ +||||||.||+.|
T Consensus 242 ~~~~-~~~p~~~~v~~~~~~~---------~~~l~~--------~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~E 301 (391)
T 3tsa_A 242 VAAA-TELPGVEAVIAVPPEH---------RALLTD--------LPDNARIAESVPLNLFLRTCE--LVICAGGSGTAFT 301 (391)
T ss_dssp HHHH-HTSTTEEEEEECCGGG---------GGGCTT--------CCTTEEECCSCCGGGTGGGCS--EEEECCCHHHHHH
T ss_pred HHHh-ccCCCeEEEEEECCcc---------hhhccc--------CCCCEEEeccCCHHHHHhhCC--EEEeCCCHHHHHH
Confidence 8888 777 889999877531 111211 156899999999999998888 5999999999999
Q ss_pred HHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHc
Q 041323 356 SLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIRH 432 (433)
Q Consensus 356 al~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 432 (433)
|+++|+|+|++|...||..|+.++++. |+|+.+... ....+.+.|.++|.++++|+ .++++++++++.+.+
T Consensus 302 a~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~-~~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~~ 372 (391)
T 3tsa_A 302 ATRLGIPQLVLPQYFDQFDYARNLAAA-GAGICLPDE-QAQSDHEQFTDSIATVLGDT----GFAAAAIKLSDEITA 372 (391)
T ss_dssp HHHTTCCEEECCCSTTHHHHHHHHHHT-TSEEECCSH-HHHTCHHHHHHHHHHHHTCT----HHHHHHHHHHHHHHT
T ss_pred HHHhCCCEEecCCcccHHHHHHHHHHc-CCEEecCcc-cccCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHc
Confidence 999999999999999999999999995 999998630 01368999999999999999 788888888877654
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.96 E-value=4e-28 Score=241.43 Aligned_cols=331 Identities=15% Similarity=0.157 Sum_probs=213.6
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEcCCC--C------
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISCANPNSPEKFNVNLVELPFC--S------ 75 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~--~------ 75 (433)
.+|||++++.++.||++|++.||++|++ +||+|++++++...+.+.. .|+.+..++.. .
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~-~GheV~v~~~~~~~~~~~~------------~g~~~~~~~~~~~~~~~~~~ 85 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARA-AGHEVTFATGEGFAGTLRK------------LGFEPVATGMPVFDGFLAAL 85 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHH------------TTCEEEECCCCHHHHHHHHH
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHH-CCCEEEEEccHHHHHHHHh------------cCCceeecCcccccchhhhh
Confidence 4799999999999999999999999999 9999999998876666666 68888887730 0
Q ss_pred ----CCCC---------CCC---CCCC-----------------CccEEEEcCCcccHHHHHHHhCCceEEEecchHHHH
Q 041323 76 ----LDHD---------LPP---NTEN-----------------RELVFGSSTFFGWAVDVAKSAGTTNVTFITGGAYGT 122 (433)
Q Consensus 76 ----~~~~---------l~~---~~~~-----------------~~~~vv~d~~~~~a~~vA~~lgiP~v~~~~~~~~~~ 122 (433)
.... +.. .... ..|+|++|....++..+|+.+|||+|.+........
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~ 165 (412)
T 3otg_A 86 RIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPD 165 (412)
T ss_dssp HHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCS
T ss_pred hhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEecccccCch
Confidence 0000 000 0000 113889997777788889999999998643321100
Q ss_pred HHHhhhhccCCCCCCCCCcccCCCCCCCccccccchhhhhhhcCCCChHHHhHHHHhhhhcccceeEecchhccchhhhh
Q 041323 123 LAYTSMWFNLPHRKTNSDEFTLPGFPERCHFHITQLHKYWRMADGSDDWSKFMQPNITQSFQSYEMLCKTAEDIEPGALQ 202 (433)
Q Consensus 123 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~~ 202 (433)
...... .+.+..+........ . . .......+.++..+...++..
T Consensus 166 ~~~~~~--------------------------~~~~~~~~~~~g~~~-~----~--~~~~~~~d~~i~~~~~~~~~~--- 209 (412)
T 3otg_A 166 DLTRSI--------------------------EEEVRGLAQRLGLDL-P----P--GRIDGFGNPFIDIFPPSLQEP--- 209 (412)
T ss_dssp HHHHHH--------------------------HHHHHHHHHHTTCCC-C----S--SCCGGGGCCEEECSCGGGSCH---
T ss_pred hhhHHH--------------------------HHHHHHHHHHcCCCC-C----c--ccccCCCCeEEeeCCHHhcCC---
Confidence 000000 000000000000000 0 0 000111222333332222211
Q ss_pred cccccCCCCeeEeCccCCcccccccccccccCCCCCCCCCchhHHHh-hhcCCCCcEEEEEeCCCCCCCHHHHHHHHHHH
Q 041323 203 WPRNYTKLPVWTIGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEW-LDLHHPGSVLYISFGSQNTISSSQTMELAIGL 281 (433)
Q Consensus 203 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al 281 (433)
...+......+-+.... ...+..+| ....+++++||+++||......+.+.++++++
T Consensus 210 --~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l 267 (412)
T 3otg_A 210 --EFRARPRRHELRPVPFA--------------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGL 267 (412)
T ss_dssp --HHHTCTTEEECCCCCCC--------------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHH
T ss_pred --cccCCCCcceeeccCCC--------------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHH
Confidence 11111111111111100 11122345 33334567999999999755677888999999
Q ss_pred HhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCCchhHHHHHhcCC
Q 041323 282 EASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALESLSQGL 361 (433)
Q Consensus 282 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~eal~~Gv 361 (433)
++.+.+++|+++... ..+.+.. .+.++.+.+|+|+.++|++++ +||+|||++|+.||+++|+
T Consensus 268 ~~~~~~~~~~~g~~~--------~~~~l~~--------~~~~v~~~~~~~~~~~l~~ad--~~v~~~g~~t~~Ea~a~G~ 329 (412)
T 3otg_A 268 AGLDADVLVASGPSL--------DVSGLGE--------VPANVRLESWVPQAALLPHVD--LVVHHGGSGTTLGALGAGV 329 (412)
T ss_dssp HTSSSEEEEECCSSC--------CCTTCCC--------CCTTEEEESCCCHHHHGGGCS--EEEESCCHHHHHHHHHHTC
T ss_pred HcCCCEEEEEECCCC--------Chhhhcc--------CCCcEEEeCCCCHHHHHhcCc--EEEECCchHHHHHHHHhCC
Confidence 998999999988641 0111211 146889999999999999999 5999999999999999999
Q ss_pred ceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 041323 362 PMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIR 431 (433)
Q Consensus 362 P~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 431 (433)
|+|++|...||..|+..+++. |+|..+.. ++.++++|.++|.++++|+ .+++++.+.++.+.
T Consensus 330 P~v~~p~~~~q~~~~~~v~~~-g~g~~~~~---~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 391 (412)
T 3otg_A 330 PQLSFPWAGDSFANAQAVAQA-GAGDHLLP---DNISPDSVSGAAKRLLAEE----SYRAGARAVAAEIA 391 (412)
T ss_dssp CEEECCCSTTHHHHHHHHHHH-TSEEECCG---GGCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH
T ss_pred CEEecCCchhHHHHHHHHHHc-CCEEecCc---ccCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHh
Confidence 999999999999999999996 99999987 6789999999999999998 56666666665543
No 20
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.96 E-value=6.9e-28 Score=210.46 Aligned_cols=165 Identities=24% Similarity=0.409 Sum_probs=140.9
Q ss_pred CCCchhHHHhhhcCCCCcEEEEEeCCCC-CCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhh
Q 041323 240 GVNPEKIIEWLDLHHPGSVLYISFGSQN-TISSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIE 318 (433)
Q Consensus 240 ~~~~~~l~~~l~~~~~~~vv~vs~GS~~-~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (433)
+.+++++.+|++..+++++|||++||.. ....+.+..+++++++.+.+++|+++... .+.+
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~---------~~~~--------- 66 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK---------PDTL--------- 66 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC---------CTTC---------
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC---------cccC---------
Confidence 4678899999987766789999999996 34667788999999988999999987541 1111
Q ss_pred hcCCCeEEecccChHHhhccCCcceEEecCCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCccc
Q 041323 319 ETKQGLLVRNWAPQLEILSHKSTGAFLSYCGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIV 398 (433)
Q Consensus 319 ~~~~~v~~~~~~pq~~il~~~~v~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~ 398 (433)
+.|+.+.+|+|+.+++.|+++++||||||++|++|++++|+|+|++|...||..||.++++. |+|+.+.. .+++
T Consensus 67 --~~~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~---~~~~ 140 (170)
T 2o6l_A 67 --GLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDF---NTMS 140 (170)
T ss_dssp --CTTEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCT---TTCC
T ss_pred --CCcEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEecc---ccCC
Confidence 45888999999999998877889999999999999999999999999999999999999995 99999986 6789
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHc
Q 041323 399 GHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIRH 432 (433)
Q Consensus 399 ~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 432 (433)
.++|.++|.++++|+ .|+++++++++.+++
T Consensus 141 ~~~l~~~i~~ll~~~----~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 141 STDLLNALKRVINDP----SYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHHHHHHHHHHCH----HHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHcCH----HHHHHHHHHHHHhhC
Confidence 999999999999988 899999999998874
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.95 E-value=8.1e-26 Score=221.64 Aligned_cols=305 Identities=16% Similarity=0.150 Sum_probs=193.6
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchh--hhhhhccCCCCCCCCCCceeEEEcCCCCCC-CCCCC
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQ--YLQNTISCANPNSPEKFNVNLVELPFCSLD-HDLPP 82 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~-~~l~~ 82 (433)
.+|++...|+-||++|.++||++|.+ |||+|+|+++....+ .+.+ .|+.++.++...-. ..+..
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~-~g~~V~~vg~~~g~e~~~v~~------------~g~~~~~i~~~~~~~~~~~~ 69 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQA-RGYAVHWLGTPRGIENDLVPK------------AGLPLHLIQVSGLRGKGLKS 69 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECSSSTHHHHTGG------------GTCCEEECC-----------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHh-CCCEEEEEECCchHhhchhhh------------cCCcEEEEECCCcCCCCHHH
Confidence 38999999889999999999999999 999999999776532 3444 67888877642100 00000
Q ss_pred CCCC------------------CccEEEEcCCcc--cHHHHHHHhCCceEEEecchHHHHHHHhhhhccCCCCCCCCCcc
Q 041323 83 NTEN------------------RELVFGSSTFFG--WAVDVAKSAGTTNVTFITGGAYGTLAYTSMWFNLPHRKTNSDEF 142 (433)
Q Consensus 83 ~~~~------------------~~~~vv~d~~~~--~a~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 142 (433)
.... ..|+|+.+.... .+..+|+.+|||++..-. +
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~-----------------------n-- 124 (365)
T 3s2u_A 70 LVKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ-----------------------N-- 124 (365)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC-----------------------S--
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEec-----------------------c--
Confidence 0000 012777774433 344567778999885310 0
Q ss_pred cCCCCCCCccccccchhhhhhhcCCCChHHHhHHHHhhhhcccceeEecchhccchhhhhcccccCCCCeeEeCccCCcc
Q 041323 143 TLPGFPERCHFHITQLHKYWRMADGSDDWSKFMQPNITQSFQSYEMLCKTAEDIEPGALQWPRNYTKLPVWTIGPLLPQS 222 (433)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~~~~~~~~~~~~~~vGp~~~~~ 222 (433)
.+||+.++ ++. +.++.+ +.++++.. ....+.+++|+.....
T Consensus 125 ~~~G~~nr-----------------------~l~------~~a~~v-~~~~~~~~---------~~~~k~~~~g~pvr~~ 165 (365)
T 3s2u_A 125 AVAGTANR-----------------------SLA------PIARRV-CEAFPDTF---------PASDKRLTTGNPVRGE 165 (365)
T ss_dssp SSCCHHHH-----------------------HHG------GGCSEE-EESSTTSS---------CC---CEECCCCCCGG
T ss_pred hhhhhHHH-----------------------hhc------ccccee-eecccccc---------cCcCcEEEECCCCchh
Confidence 12221110 000 011111 22222110 0124566777666543
Q ss_pred cccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCCCCHHHHHHHHHHHHh----CCCeEEEEEcCCCCC
Q 041323 223 YLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNTISSSQTMELAIGLEA----SAKSFLWVIRPPVGF 298 (433)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~----~~~~~l~~~~~~~~~ 298 (433)
..... . .+....+++++|+|+.||.+..... ..+.+++.. .+..++|++|...
T Consensus 166 ~~~~~-----------------~--~~~~~~~~~~~ilv~gGs~g~~~~~--~~~~~al~~l~~~~~~~vi~~~G~~~-- 222 (365)
T 3s2u_A 166 LFLDA-----------------H--ARAPLTGRRVNLLVLGGSLGAEPLN--KLLPEALAQVPLEIRPAIRHQAGRQH-- 222 (365)
T ss_dssp GCCCT-----------------T--SSCCCTTSCCEEEECCTTTTCSHHH--HHHHHHHHTSCTTTCCEEEEECCTTT--
T ss_pred hccch-----------------h--hhcccCCCCcEEEEECCcCCccccc--hhhHHHHHhcccccceEEEEecCccc--
Confidence 21100 0 0111223456899999998754322 234445443 3567888887541
Q ss_pred CCCccccccCCchhHHHHhhhcCCCeEEecccChH-HhhccCCcceEEecCCchhHHHHHhcCCceEecccc----cchh
Q 041323 299 DLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQL-EILSHKSTGAFLSYCGWNSALESLSQGLPMIGWPIA----AEQT 373 (433)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~-~il~~~~v~~~ithgG~~s~~eal~~GvP~i~~P~~----~dQ~ 373 (433)
.+...+..+..+.++.+.+|++++ ++++.++ ++|||+|.+|++|++++|+|+|.+|+. .||.
T Consensus 223 -----------~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aD--lvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~ 289 (365)
T 3s2u_A 223 -----------AEITAERYRTVAVEADVAPFISDMAAAYAWAD--LVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQT 289 (365)
T ss_dssp -----------HHHHHHHHHHTTCCCEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECC-----CCHHH
T ss_pred -----------cccccceecccccccccccchhhhhhhhccce--EEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHH
Confidence 123333333335678888999986 5899999 599999999999999999999999974 5899
Q ss_pred hHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Q 041323 374 YNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIG 427 (433)
Q Consensus 374 ~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~ 427 (433)
.||+.+++. |+|+.+.. +++++++|.++|.++++|+++.++|+++|++++
T Consensus 290 ~NA~~l~~~-G~a~~l~~---~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~ 339 (365)
T 3s2u_A 290 RNAEFLVRS-GAGRLLPQ---KSTGAAELAAQLSEVLMHPETLRSMADQARSLA 339 (365)
T ss_dssp HHHHHHHTT-TSEEECCT---TTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHC-CCEEEeec---CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcC
Confidence 999999996 99999987 788999999999999999988888888888763
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.78 E-value=7.8e-17 Score=156.98 Aligned_cols=302 Identities=14% Similarity=0.117 Sum_probs=183.9
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCch--hhhhhhccCCCCCCCCCCceeEEEcCCCCCCC
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNI--QYLQNTISCANPNSPEKFNVNLVELPFCSLDH 78 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~ 78 (433)
|+..+|||++++.+..||..+++.||++|++ +||+|++++..... ..+.. .++++..++..
T Consensus 2 M~~m~mkIl~~~~~~gG~~~~~~~la~~L~~-~G~~V~v~~~~~~~~~~~~~~------------~g~~~~~~~~~---- 64 (364)
T 1f0k_A 2 MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMA-QGWQVRWLGTADRMEADLVPK------------HGIEIDFIRIS---- 64 (364)
T ss_dssp -----CEEEEECCSSHHHHHHHHHHHHHHHT-TTCEEEEEECTTSTHHHHGGG------------GTCEEEECCCC----
T ss_pred CCCCCcEEEEEeCCCccchhHHHHHHHHHHH-cCCEEEEEecCCcchhhhccc------------cCCceEEecCC----
Confidence 4533489999998888999999999999999 99999999976542 22333 57788777643
Q ss_pred CCCCCC-----CC------------------CccEEEEcCCc--ccHHHHHHHhCCceEEEecchHHHHHHHhhhhccCC
Q 041323 79 DLPPNT-----EN------------------RELVFGSSTFF--GWAVDVAKSAGTTNVTFITGGAYGTLAYTSMWFNLP 133 (433)
Q Consensus 79 ~l~~~~-----~~------------------~~~~vv~d~~~--~~a~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~p 133 (433)
.+.... .. ..|+|+++... ..+..+++.+|+|++......
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~--------------- 129 (364)
T 1f0k_A 65 GLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG--------------- 129 (364)
T ss_dssp CCTTCCHHHHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS---------------
T ss_pred ccCcCccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC---------------
Confidence 111100 00 01266666432 234456667788877431110
Q ss_pred CCCCCCCcccCCCCCCCccccccchhhhhhhcCCCChHHHhHHHHhhhhcccceeEecchhccchhhhhcccccCCCCee
Q 041323 134 HRKTNSDEFTLPGFPERCHFHITQLHKYWRMADGSDDWSKFMQPNITQSFQSYEMLCKTAEDIEPGALQWPRNYTKLPVW 213 (433)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~le~~~~~~~~~~~~~~~~ 213 (433)
.++ . . .+. ..+.++.+++.+- .. + +++.
T Consensus 130 ----------~~~------~----~-----------------~~~--~~~~~d~v~~~~~-~~-----------~-~~~~ 157 (364)
T 1f0k_A 130 ----------IAG------L----T-----------------NKW--LAKIATKVMQAFP-GA-----------F-PNAE 157 (364)
T ss_dssp ----------SCC------H----H-----------------HHH--HTTTCSEEEESST-TS-----------S-SSCE
T ss_pred ----------CCc------H----H-----------------HHH--HHHhCCEEEecCh-hh-----------c-CCce
Confidence 000 0 0 000 0112233333221 10 1 2455
Q ss_pred EeCccCCcccccccccccccCCCCCCCCCchhHHHhhhcCCCCcEEEEEeCCCCCCCHHHHHHHHHHHHhC--CCeEEEE
Q 041323 214 TIGPLLPQSYLKKSFFNLQQHSGKNPGVNPEKIIEWLDLHHPGSVLYISFGSQNTISSSQTMELAIGLEAS--AKSFLWV 291 (433)
Q Consensus 214 ~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~--~~~~l~~ 291 (433)
.+|..+..... .. + ...+.+...+++++|+++.|+... ......+++++... +.+++++
T Consensus 158 ~i~n~v~~~~~---------------~~-~-~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i 218 (364)
T 1f0k_A 158 VVGNPVRTDVL---------------AL-P-LPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQ 218 (364)
T ss_dssp ECCCCCCHHHH---------------TS-C-CHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEE
T ss_pred EeCCccchhhc---------------cc-c-hhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEE
Confidence 66654432210 01 1 111222233345578888888753 33344455555543 5677777
Q ss_pred EcCCCCCCCCccccccCCchhHHHHhhhcC-CCeEEecccCh-HHhhccCCcceEEecCCchhHHHHHhcCCceEecccc
Q 041323 292 IRPPVGFDLRGEFRSERLPEGFEERIEETK-QGLLVRNWAPQ-LEILSHKSTGAFLSYCGWNSALESLSQGLPMIGWPIA 369 (433)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~pq-~~il~~~~v~~~ithgG~~s~~eal~~GvP~i~~P~~ 369 (433)
+|... .+.+.+...+.+ .++.+.+|+++ ..+++.++ +||+++|.+++.||+++|+|+|+.|..
T Consensus 219 ~G~~~-------------~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad--~~v~~sg~~~~~EAma~G~Pvi~~~~~ 283 (364)
T 1f0k_A 219 SGKGS-------------QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWAD--VVVCRSGALTVSEIAAAGLPALFVPFQ 283 (364)
T ss_dssp CCTTC-------------HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECCCC
T ss_pred cCCch-------------HHHHHHHHhhcCCCceEEecchhhHHHHHHhCC--EEEECCchHHHHHHHHhCCCEEEeeCC
Confidence 77541 123333332212 47888899954 56888988 499999999999999999999999987
Q ss_pred ---cchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 041323 370 ---AEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKI 426 (433)
Q Consensus 370 ---~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l 426 (433)
.||..|+..+.+. |.|..+.. ++.+.++++++|.++ |++..+++++++++.
T Consensus 284 g~~~~q~~~~~~~~~~-g~g~~~~~---~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~ 337 (364)
T 1f0k_A 284 HKDRQQYWNALPLEKA-GAAKIIEQ---PQLSVDAVANTLAGW--SRETLLTMAERARAA 337 (364)
T ss_dssp CTTCHHHHHHHHHHHT-TSEEECCG---GGCCHHHHHHHHHTC--CHHHHHHHHHHHHHT
T ss_pred CCchhHHHHHHHHHhC-CcEEEecc---ccCCHHHHHHHHHhc--CHHHHHHHHHHHHHh
Confidence 7999999999996 99999886 666799999999988 664566666666554
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.59 E-value=4.1e-15 Score=133.79 Aligned_cols=139 Identities=14% Similarity=0.098 Sum_probs=96.3
Q ss_pred hhhcCCCCcEEEEEeCCCCCCCHHHHHHH-----HHHHHhCC-CeEEEEEcCCCCCCCCccccccCCchhHHHHh-----
Q 041323 249 WLDLHHPGSVLYISFGSQNTISSSQTMEL-----AIGLEASA-KSFLWVIRPPVGFDLRGEFRSERLPEGFEERI----- 317 (433)
Q Consensus 249 ~l~~~~~~~vv~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 317 (433)
++...+++++|||++||...+ .+.+..+ +++|.+.+ .+++|++|... . + ..+.+....
T Consensus 21 ~~~~~~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~-------~--~-~~~~~~~~~~~~~~ 89 (224)
T 2jzc_A 21 MLEGIIEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNY-------S--S-EFEHLVQERGGQRE 89 (224)
T ss_dssp ---CCCCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSS-------C--C-CCCSHHHHHTCEEC
T ss_pred ccCCCCCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCc-------h--h-hHHHHHHhhhcccc
Confidence 334444567899999998432 3333433 48888877 79999999752 0 0 001110000
Q ss_pred --------------------hhcCCCeEEecccChH-Hhhc-cCCcceEEecCCchhHHHHHhcCCceEecccc----cc
Q 041323 318 --------------------EETKQGLLVRNWAPQL-EILS-HKSTGAFLSYCGWNSALESLSQGLPMIGWPIA----AE 371 (433)
Q Consensus 318 --------------------~~~~~~v~~~~~~pq~-~il~-~~~v~~~ithgG~~s~~eal~~GvP~i~~P~~----~d 371 (433)
....-++.+.+|++++ ++|+ .++ ++|||||+||++|++++|+|+|++|.. .|
T Consensus 90 ~~l~p~~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Ad--lvIshaGagTv~Eal~~G~P~IvVP~~~~~~~H 167 (224)
T 2jzc_A 90 SQKIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSD--LVISHAGTGSILDSLRLNKPLIVCVNDSLMDNH 167 (224)
T ss_dssp SCCCSSCTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCS--CEEESSCHHHHHHHHHTTCCCCEECCSSCCCCH
T ss_pred ccccccccccccccccccccccCCceEEEeeccchHHHHHHhcCC--EEEECCcHHHHHHHHHhCCCEEEEcCcccccch
Confidence 0001245677888887 7899 999 599999999999999999999999985 47
Q ss_pred hhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHH
Q 041323 372 QTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMV 409 (433)
Q Consensus 372 Q~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~v 409 (433)
|..||+++++. |+|+.+. .++|.++|+++
T Consensus 168 Q~~nA~~l~~~-G~~~~~~--------~~~L~~~i~~l 196 (224)
T 2jzc_A 168 QQQIADKFVEL-GYVWSCA--------PTETGLIAGLR 196 (224)
T ss_dssp HHHHHHHHHHH-SCCCEEC--------SCTTTHHHHHH
T ss_pred HHHHHHHHHHC-CCEEEcC--------HHHHHHHHHHH
Confidence 99999999996 9987663 45666677766
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.39 E-value=7.7e-12 Score=116.94 Aligned_cols=117 Identities=9% Similarity=0.091 Sum_probs=88.2
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHH-
Q 041323 256 GSVLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLE- 334 (433)
Q Consensus 256 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~- 334 (433)
.+.|+|++|.... .+....++++|.+.. ++.+++|.+. ...+.+...... ..|+.+.+|++++.
T Consensus 157 ~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~-----------~~~~~l~~~~~~-~~~v~v~~~~~~m~~ 221 (282)
T 3hbm_A 157 KYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSN-----------PNLKKLQKFAKL-HNNIRLFIDHENIAK 221 (282)
T ss_dssp CEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTC-----------TTHHHHHHHHHT-CSSEEEEESCSCHHH
T ss_pred CCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCc-----------hHHHHHHHHHhh-CCCEEEEeCHHHHHH
Confidence 4579999986542 235556778876654 5777777541 112333322221 34899999999884
Q ss_pred hhccCCcceEEecCCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEcc
Q 041323 335 ILSHKSTGAFLSYCGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTR 391 (433)
Q Consensus 335 il~~~~v~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~ 391 (433)
++..++ ++||+|| +|++|+++.|+|+|++|+..+|..||..+++. |+++.+..
T Consensus 222 ~m~~aD--lvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 222 LMNESN--KLIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp HHHTEE--EEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred HHHHCC--EEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 888888 5999999 89999999999999999999999999999996 99999875
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.91 E-value=6.9e-07 Score=88.51 Aligned_cols=97 Identities=12% Similarity=0.088 Sum_probs=71.8
Q ss_pred CCCeEEecccChH---HhhccCCcceEEec----CCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCC
Q 041323 321 KQGLLVRNWAPQL---EILSHKSTGAFLSY----CGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGV 393 (433)
Q Consensus 321 ~~~v~~~~~~pq~---~il~~~~v~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~ 393 (433)
..++.+.+|+|+. .++..+++ +|.- |..+++.||+++|+|+|+.+. ......+.+. +.|..+..
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-- 375 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEG-ETGLLVDG-- 375 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBT-TTEEEESS--
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCC-CcEEECCC--
Confidence 3679999999864 47788886 5543 334689999999999998754 3344455553 67888864
Q ss_pred CCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Q 041323 394 QSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQ 429 (433)
Q Consensus 394 ~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~ 429 (433)
-+.++++++|.++++|++..+.+.+++++..+.
T Consensus 376 ---~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 376 ---HSPHAWADALATLLDDDETRIRMGEDAVEHART 408 (438)
T ss_dssp ---CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 368999999999999886667777777766544
No 26
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.91 E-value=6.6e-07 Score=88.33 Aligned_cols=147 Identities=10% Similarity=0.029 Sum_probs=94.6
Q ss_pred EEEEEeCCCC-CC-CHHHHHHHHHHHHh----CCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccC
Q 041323 258 VLYISFGSQN-TI-SSSQTMELAIGLEA----SAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAP 331 (433)
Q Consensus 258 vv~vs~GS~~-~~-~~~~~~~~~~al~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 331 (433)
.+++..|+.. .. +.+.+.+.+..+.+ .+.+++ .+|... ....+.+.+.....++.+.+.+|++
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~-i~G~g~----------~~~~~~l~~~~~~~~~~~~~~g~~~ 320 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFI-IIGKGD----------PELEGWARSLEEKHGNVKVITEMLS 320 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEE-EECCCC----------HHHHHHHHHHHHHCTTEEEECSCCC
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEE-EEcCCC----------hhHHHHHHHHHhhcCCEEEEcCCCC
Confidence 6777788887 33 45566666666655 344544 445331 0011222233333345566778899
Q ss_pred hHH---hhccCCcceEEe----cCCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHH
Q 041323 332 QLE---ILSHKSTGAFLS----YCGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKN 404 (433)
Q Consensus 332 q~~---il~~~~v~~~it----hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ 404 (433)
+.+ ++..+++ +|. -|-.+++.||+++|+|+|+-.. ......+. . |.|..+.. -+.+++++
T Consensus 321 ~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~-~-~~g~~~~~-----~d~~~la~ 387 (439)
T 3fro_A 321 REFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIIT-N-ETGILVKA-----GDPGELAN 387 (439)
T ss_dssp HHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCC-T-TTCEEECT-----TCHHHHHH
T ss_pred HHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEE-c-CceEEeCC-----CCHHHHHH
Confidence 864 5777886 442 2334799999999999998653 23333333 3 78888875 36899999
Q ss_pred HHHHHhc-CCchhHHHHHHHHHHHH
Q 041323 405 VIEMVMD-EAGKGQEMKAKAEKIGR 428 (433)
Q Consensus 405 ai~~vl~-~~~~~~~~~~~a~~l~~ 428 (433)
+|.++++ +++..+.+.+++++..+
T Consensus 388 ~i~~ll~~~~~~~~~~~~~~~~~~~ 412 (439)
T 3fro_A 388 AILKALELSRSDLSKFRENCKKRAM 412 (439)
T ss_dssp HHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHh
Confidence 9999998 88788888888887653
No 27
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.89 E-value=1.9e-07 Score=91.01 Aligned_cols=145 Identities=9% Similarity=0.028 Sum_probs=92.2
Q ss_pred EEEEEeCCCCC-CCHHHHHHHHHHHHh--CCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHH
Q 041323 258 VLYISFGSQNT-ISSSQTMELAIGLEA--SAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLE 334 (433)
Q Consensus 258 vv~vs~GS~~~-~~~~~~~~~~~al~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ 334 (433)
.+++..|+... ...+.+.+.+..+.+ .+.++++ +|.+. ..+.+.........++.+.+|+|+.+
T Consensus 199 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~------------~~~~l~~~~~~~~~~v~~~g~~~~~~ 265 (394)
T 3okp_A 199 PVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLI-VGSGR------------YESTLRRLATDVSQNVKFLGRLEYQD 265 (394)
T ss_dssp CEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEE-ECCCT------------THHHHHHHTGGGGGGEEEEESCCHHH
T ss_pred eEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEE-EcCch------------HHHHHHHHHhcccCeEEEcCCCCHHH
Confidence 56777788753 233444444444433 3456554 44321 11222222221246899999998665
Q ss_pred ---hhccCCcceEEe-----------cCCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHH
Q 041323 335 ---ILSHKSTGAFLS-----------YCGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGH 400 (433)
Q Consensus 335 ---il~~~~v~~~it-----------hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~ 400 (433)
++..+++ +|. -|..+++.||+++|+|+|+.+..+ ....+.+ |.|..+.. -+.+
T Consensus 266 ~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~----~~e~i~~--~~g~~~~~-----~d~~ 332 (394)
T 3okp_A 266 MINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGG----APETVTP--ATGLVVEG-----SDVD 332 (394)
T ss_dssp HHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTT----GGGGCCT--TTEEECCT-----TCHH
T ss_pred HHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCCC----hHHHHhc--CCceEeCC-----CCHH
Confidence 6778885 554 455679999999999999976532 2222332 57777764 3689
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHH
Q 041323 401 DVKNVIEMVMDEAGKGQEMKAKAEKIGR 428 (433)
Q Consensus 401 ~l~~ai~~vl~~~~~~~~~~~~a~~l~~ 428 (433)
++.++|.++++|++..+.+.+++++..+
T Consensus 333 ~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 360 (394)
T 3okp_A 333 KLSELLIELLDDPIRRAAMGAAGRAHVE 360 (394)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 9999999999998777778777776544
No 28
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.78 E-value=3.3e-07 Score=89.66 Aligned_cols=144 Identities=8% Similarity=0.048 Sum_probs=93.1
Q ss_pred EEEEEeCCC-CC-CCHHHHHHHHHHHHhC--CCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChH
Q 041323 258 VLYISFGSQ-NT-ISSSQTMELAIGLEAS--AKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQL 333 (433)
Q Consensus 258 vv~vs~GS~-~~-~~~~~~~~~~~al~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~ 333 (433)
.+++..|+. .. ...+.+.+.+..+.+. +.+++ .+|... . +.+.+.+.....++.+.+|+++.
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~-i~G~~~------------~-~~l~~~~~~~~~~v~~~g~~~~~ 274 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEIL-IVGRGD------------E-DELREQAGDLAGHLRFLGQVDDA 274 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEE-EESCSC------------H-HHHHHHTGGGGGGEEECCSCCHH
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEE-EEcCCc------------H-HHHHHHHHhccCcEEEEecCCHH
Confidence 366677877 42 2334444444444432 45544 455431 1 33333333224688899999975
Q ss_pred ---HhhccCCcceEEe----cCCc-hhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHH
Q 041323 334 ---EILSHKSTGAFLS----YCGW-NSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNV 405 (433)
Q Consensus 334 ---~il~~~~v~~~it----hgG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~a 405 (433)
.++..+++ +|. +-|+ +++.||+++|+|+|+.+. ......+.+. +.|..+.. -+.+++.++
T Consensus 275 ~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-----~d~~~l~~~ 342 (406)
T 2gek_A 275 TKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPV-----DDADGMAAA 342 (406)
T ss_dssp HHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCT-----TCHHHHHHH
T ss_pred HHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCC-----CCHHHHHHH
Confidence 67888886 442 3343 589999999999998754 4455566653 67888864 368999999
Q ss_pred HHHHhcCCchhHHHHHHHHHHH
Q 041323 406 IEMVMDEAGKGQEMKAKAEKIG 427 (433)
Q Consensus 406 i~~vl~~~~~~~~~~~~a~~l~ 427 (433)
|.++++|++..+.+.+++++..
T Consensus 343 i~~l~~~~~~~~~~~~~~~~~~ 364 (406)
T 2gek_A 343 LIGILEDDQLRAGYVARASERV 364 (406)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHG
T ss_pred HHHHHcCHHHHHHHHHHHHHHH
Confidence 9999998866666777766654
No 29
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.74 E-value=3.6e-06 Score=85.05 Aligned_cols=97 Identities=12% Similarity=0.029 Sum_probs=70.0
Q ss_pred CCCeEEecccChHH---hhccC----CcceEEec----CCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEE
Q 041323 321 KQGLLVRNWAPQLE---ILSHK----STGAFLSY----CGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVEL 389 (433)
Q Consensus 321 ~~~v~~~~~~pq~~---il~~~----~v~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l 389 (433)
..++.+.+++|+.+ ++..+ ++ ||.- |-..++.||+++|+|+|+-.. ......+.+. ..|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEe
Confidence 35788999998654 66777 75 5521 224689999999999998753 2344445553 578888
Q ss_pred ccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Q 041323 390 TRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQ 429 (433)
Q Consensus 390 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~ 429 (433)
.. -+.++++++|.++++|++..+.+.+++++..+.
T Consensus 407 ~~-----~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~ 441 (499)
T 2r60_A 407 DP-----EDPEDIARGLLKAFESEETWSAYQEKGKQRVEE 441 (499)
T ss_dssp CT-----TCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CC-----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 64 368999999999999886667777777765543
No 30
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.67 E-value=5.8e-06 Score=80.71 Aligned_cols=145 Identities=10% Similarity=0.052 Sum_probs=89.0
Q ss_pred EEEEEeCCCCC-CCHHHHHHHHHHHHh-CCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhc--CCCeEEecccCh-
Q 041323 258 VLYISFGSQNT-ISSSQTMELAIGLEA-SAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEET--KQGLLVRNWAPQ- 332 (433)
Q Consensus 258 vv~vs~GS~~~-~~~~~~~~~~~al~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~pq- 332 (433)
.+++..|.... ...+.+.+.+..+.+ .+.++ +.+|... ..+.+.+..++. ..++.+.++..+
T Consensus 212 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l-~i~G~g~------------~~~~l~~~~~~~~l~~~v~~~g~~~~~ 278 (394)
T 2jjm_A 212 KILIHISNFRKVKRVQDVVQAFAKIVTEVDAKL-LLVGDGP------------EFCTILQLVKNLHIEDRVLFLGKQDNV 278 (394)
T ss_dssp CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEE-EEECCCT------------THHHHHHHHHTTTCGGGBCCCBSCSCT
T ss_pred eEEEEeeccccccCHHHHHHHHHHHHhhCCCEE-EEECCch------------HHHHHHHHHHHcCCCCeEEEeCchhhH
Confidence 45666787753 223444444444433 34554 4455331 112333322211 246767676554
Q ss_pred HHhhccCCcceEE----ecCCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHH
Q 041323 333 LEILSHKSTGAFL----SYCGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEM 408 (433)
Q Consensus 333 ~~il~~~~v~~~i----thgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~ 408 (433)
..++..+++ +| .-|..+++.||+++|+|+|+.+..+ ....+.+. +.|..++. -+.++++++|.+
T Consensus 279 ~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~-~~g~~~~~-----~d~~~la~~i~~ 346 (394)
T 2jjm_A 279 AELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHG-DTGYLCEV-----GDTTGVADQAIQ 346 (394)
T ss_dssp HHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBT-TTEEEECT-----TCHHHHHHHHHH
T ss_pred HHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcC-CceEEeCC-----CCHHHHHHHHHH
Confidence 357888885 66 4455679999999999999877532 22233332 57888864 268999999999
Q ss_pred HhcCCchhHHHHHHHHHHH
Q 041323 409 VMDEAGKGQEMKAKAEKIG 427 (433)
Q Consensus 409 vl~~~~~~~~~~~~a~~l~ 427 (433)
+++|++..+.+.+++++..
T Consensus 347 l~~~~~~~~~~~~~~~~~~ 365 (394)
T 2jjm_A 347 LLKDEELHRNMGERARESV 365 (394)
T ss_dssp HHHCHHHHHHHHHHHHHHH
T ss_pred HHcCHHHHHHHHHHHHHHH
Confidence 9998866677777777765
No 31
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.67 E-value=1.3e-06 Score=84.33 Aligned_cols=147 Identities=13% Similarity=0.176 Sum_probs=98.0
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHHHHhC------CCeEEEEEcCCCCCCCCccccccCCchhHHHHhhh--cCCCeEEec
Q 041323 257 SVLYISFGSQNTISSSQTMELAIGLEAS------AKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEE--TKQGLLVRN 328 (433)
Q Consensus 257 ~vv~vs~GS~~~~~~~~~~~~~~al~~~------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~ 328 (433)
..+++..|+... ......+++++... +.+ ++.+|.+. .+.+.+..+. ...++.+.+
T Consensus 196 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~-l~i~G~g~-------------~~~~~~~~~~~~~~~~v~~~g 259 (374)
T 2iw1_A 196 QNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTL-LFVVGQDK-------------PRKFEALAEKLGVRSNVHFFS 259 (374)
T ss_dssp CEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEE-EEEESSSC-------------CHHHHHHHHHHTCGGGEEEES
T ss_pred CeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceE-EEEEcCCC-------------HHHHHHHHHHcCCCCcEEECC
Confidence 356777787653 23344556666554 233 44555431 1233332221 135788888
Q ss_pred ccCh-HHhhccCCcceEEe----cCCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHH
Q 041323 329 WAPQ-LEILSHKSTGAFLS----YCGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVK 403 (433)
Q Consensus 329 ~~pq-~~il~~~~v~~~it----hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~ 403 (433)
+..+ ..++..+++ +|. -|..+++.||+++|+|+|+... ..+...+++. +.|..+.. .-+.+++.
T Consensus 260 ~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~----~~~~~~l~ 328 (374)
T 2iw1_A 260 GRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAE----PFSQEQLN 328 (374)
T ss_dssp CCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECS----SCCHHHHH
T ss_pred CcccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCC----CCCHHHHH
Confidence 8654 357888885 554 4567899999999999998764 3455677775 89999862 23789999
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHH
Q 041323 404 NVIEMVMDEAGKGQEMKAKAEKIGRQI 430 (433)
Q Consensus 404 ~ai~~vl~~~~~~~~~~~~a~~l~~~~ 430 (433)
++|.++++|++..+.+.+++++..+..
T Consensus 329 ~~i~~l~~~~~~~~~~~~~~~~~~~~~ 355 (374)
T 2iw1_A 329 EVLRKALTQSPLRMAWAENARHYADTQ 355 (374)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHcChHHHHHHHHHHHHHHHHh
Confidence 999999999877778888888876643
No 32
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.28 E-value=4.7e-06 Score=80.90 Aligned_cols=142 Identities=11% Similarity=0.123 Sum_probs=89.0
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHHh-----CCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecc
Q 041323 255 PGSVLYISFGSQNTISSSQTMELAIGLEA-----SAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNW 329 (433)
Q Consensus 255 ~~~vv~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 329 (433)
++++++++.|....... .+..+++++.. .+.++++..+.+ . .+.+.+.+.... ..++.+.++
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~----------~-~~~~~l~~~~~~-~~~v~~~g~ 270 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLN----------P-NVREPVNRILGH-VKNVILIDP 270 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBC----------H-HHHHHHHHHHTT-CTTEEEECC
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCC----------H-HHHHHHHHHhhc-CCCEEEeCC
Confidence 35578888887654322 33444454433 246666644421 0 011112221121 357888666
Q ss_pred cCh---HHhhccCCcceEEecCCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHH
Q 041323 330 APQ---LEILSHKSTGAFLSYCGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVI 406 (433)
Q Consensus 330 ~pq---~~il~~~~v~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai 406 (433)
+++ ..+++.+++ ||+.+|. .+.||+++|+|+|+.+..++.. .+.+. |.|+.+.. +.++++++|
T Consensus 271 ~~~~~~~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~----e~v~~-g~g~lv~~------d~~~la~~i 336 (384)
T 1vgv_A 271 QEYLPFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERP----EAVTA-GTVRLVGT------DKQRIVEEV 336 (384)
T ss_dssp CCHHHHHHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCH----HHHHH-TSEEEECS------SHHHHHHHH
T ss_pred CCHHHHHHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcc----hhhhC-CceEEeCC------CHHHHHHHH
Confidence 664 457888885 8888854 4889999999999998744432 34554 88888853 789999999
Q ss_pred HHHhcCCchhHHHHHHH
Q 041323 407 EMVMDEAGKGQEMKAKA 423 (433)
Q Consensus 407 ~~vl~~~~~~~~~~~~a 423 (433)
.++++|++..++|.+++
T Consensus 337 ~~ll~d~~~~~~~~~~~ 353 (384)
T 1vgv_A 337 TRLLKDENEYQAMSRAH 353 (384)
T ss_dssp HHHHHCHHHHHHHHSSC
T ss_pred HHHHhChHHHhhhhhcc
Confidence 99999885555555444
No 33
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.27 E-value=1e-05 Score=69.76 Aligned_cols=141 Identities=9% Similarity=0.097 Sum_probs=87.4
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhC-CCeEEEEEcCCCCCCCCccccccCCchhHHHH-hhhcCCCeEEecccCh---H
Q 041323 259 LYISFGSQNTISSSQTMELAIGLEAS-AKSFLWVIRPPVGFDLRGEFRSERLPEGFEER-IEETKQGLLVRNWAPQ---L 333 (433)
Q Consensus 259 v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~pq---~ 333 (433)
+++..|+... ...+..++++++.. +.+++++ |... ....+. ....+ ......++.+.+|+++ .
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~-G~~~--------~~~~l~-~~~~~~~~~l~~~v~~~g~~~~~e~~ 92 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIV-GWFS--------KGDHAE-RYARKIMKIAPDNVKFLGSVSEEELI 92 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEE-BCCC--------TTSTHH-HHHHHHHHHSCTTEEEEESCCHHHHH
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEEE-ecCc--------cHHHHH-HHHHhhhcccCCcEEEeCCCCHHHHH
Confidence 4556777752 33455667777765 5665554 4321 011111 11110 1112468999999998 4
Q ss_pred HhhccCCcceEEe---cCC-chhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHH
Q 041323 334 EILSHKSTGAFLS---YCG-WNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMV 409 (433)
Q Consensus 334 ~il~~~~v~~~it---hgG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~v 409 (433)
.++..+++ +|. +-| ..++.||+++|+|+|+... ..+...+.+. +.|..+ . . +.+++.++|.++
T Consensus 93 ~~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~---~--d~~~l~~~i~~l 159 (177)
T 2f9f_A 93 DLYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N---A--DVNEIIDAMKKV 159 (177)
T ss_dssp HHHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C---S--CHHHHHHHHHHH
T ss_pred HHHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C---C--CHHHHHHHHHHH
Confidence 57888886 554 234 4599999999999998753 4455555553 678887 4 2 689999999999
Q ss_pred hcCCchhHHHHHHHHHHH
Q 041323 410 MDEAGKGQEMKAKAEKIG 427 (433)
Q Consensus 410 l~~~~~~~~~~~~a~~l~ 427 (433)
++|++. +++++++.+
T Consensus 160 ~~~~~~---~~~~~~~~a 174 (177)
T 2f9f_A 160 SKNPDK---FKKDCFRRA 174 (177)
T ss_dssp HHCTTT---THHHHHHHH
T ss_pred HhCHHH---HHHHHHHHH
Confidence 988743 244444433
No 34
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.15 E-value=8.3e-06 Score=79.02 Aligned_cols=138 Identities=11% Similarity=0.155 Sum_probs=85.8
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHHh-----CCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEeccc
Q 041323 256 GSVLYISFGSQNTISSSQTMELAIGLEA-----SAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWA 330 (433)
Q Consensus 256 ~~vv~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 330 (433)
+++|+++.|...... .+..++++++. .+..+++..+.+ . .+.+.+.+.... ..++.+.+++
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~-------~----~~~~~l~~~~~~-~~~v~~~g~~ 263 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN-------P----VVREAVFPVLKG-VRNFVLLDPL 263 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC-------H----HHHHHHHHHHTT-CTTEEEECCC
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC-------H----HHHHHHHHHhcc-CCCEEEECCC
Confidence 456777777553221 23445555432 256666554532 0 011122222221 3578888666
Q ss_pred Ch---HHhhccCCcceEEecCCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHH
Q 041323 331 PQ---LEILSHKSTGAFLSYCGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIE 407 (433)
Q Consensus 331 pq---~~il~~~~v~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~ 407 (433)
++ ..+++.++ +||+.+| |.+.||+++|+|+|+.+...++.. +.+. |.|+.+.. +.++|.++|.
T Consensus 264 g~~~~~~~~~~ad--~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~~------d~~~la~~i~ 329 (376)
T 1v4v_A 264 EYGSMAALMRASL--LLVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAGT------DPEGVYRVVK 329 (376)
T ss_dssp CHHHHHHHHHTEE--EEEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECCS------CHHHHHHHHH
T ss_pred CHHHHHHHHHhCc--EEEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECCC------CHHHHHHHHH
Confidence 55 46888888 4898884 446699999999999887666655 3454 88887742 7899999999
Q ss_pred HHhcCCchhHHHHH
Q 041323 408 MVMDEAGKGQEMKA 421 (433)
Q Consensus 408 ~vl~~~~~~~~~~~ 421 (433)
++++|++..++|++
T Consensus 330 ~ll~d~~~~~~~~~ 343 (376)
T 1v4v_A 330 GLLENPEELSRMRK 343 (376)
T ss_dssp HHHTCHHHHHHHHH
T ss_pred HHHhChHhhhhhcc
Confidence 99998744444443
No 35
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.15 E-value=1.4e-05 Score=78.45 Aligned_cols=140 Identities=10% Similarity=0.149 Sum_probs=85.1
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHHh-----CCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecc
Q 041323 255 PGSVLYISFGSQNTISSSQTMELAIGLEA-----SAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNW 329 (433)
Q Consensus 255 ~~~vv~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 329 (433)
++++|+++.+-....... +..+++++.+ .+.++++.++.+. .+.+.+.+... ...++.+.++
T Consensus 229 ~~~~vlv~~hR~~~~~~~-~~~ll~A~~~l~~~~~~~~~v~~~g~~~-----------~~~~~l~~~~~-~~~~v~~~~~ 295 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGGG-FERICQALITTAEQHPECQILYPVHLNP-----------NVREPVNKLLK-GVSNIVLIEP 295 (396)
T ss_dssp TSEEEEEECSCBCCCTTH-HHHHHHHHHHHHHHCTTEEEEEECCBCH-----------HHHHHHHHHTT-TCTTEEEECC
T ss_pred CCCEEEEEECCcccchhH-HHHHHHHHHHHHHhCCCceEEEEeCCCh-----------HHHHHHHHHHc-CCCCEEEeCC
Confidence 356777776322222222 3455555543 3567777655320 01111111111 1357888777
Q ss_pred cCh---HHhhccCCcceEEecCCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHH
Q 041323 330 APQ---LEILSHKSTGAFLSYCGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVI 406 (433)
Q Consensus 330 ~pq---~~il~~~~v~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai 406 (433)
+++ ..+++.++ ++|+-.| |.+.||.++|+|+|+..-..+++ .+.+. |.++.+.. ++++|.+++
T Consensus 296 lg~~~~~~l~~~ad--~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~-G~~~lv~~------d~~~l~~ai 361 (396)
T 3dzc_A 296 QQYLPFVYLMDRAH--IILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAA-GTVKLVGT------NQQQICDAL 361 (396)
T ss_dssp CCHHHHHHHHHHCS--EEEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHH-TSEEECTT------CHHHHHHHH
T ss_pred CCHHHHHHHHHhcC--EEEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHc-CceEEcCC------CHHHHHHHH
Confidence 753 45778888 5999988 55579999999999975444543 24554 88866542 589999999
Q ss_pred HHHhcCCchhHHHHH
Q 041323 407 EMVMDEAGKGQEMKA 421 (433)
Q Consensus 407 ~~vl~~~~~~~~~~~ 421 (433)
.++++|++..++|++
T Consensus 362 ~~ll~d~~~~~~m~~ 376 (396)
T 3dzc_A 362 SLLLTDPQAYQAMSQ 376 (396)
T ss_dssp HHHHHCHHHHHHHHT
T ss_pred HHHHcCHHHHHHHhh
Confidence 999998844444443
No 36
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.11 E-value=4.1e-05 Score=73.02 Aligned_cols=125 Identities=14% Similarity=0.122 Sum_probs=79.1
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChH---Hh
Q 041323 259 LYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQL---EI 335 (433)
Q Consensus 259 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~---~i 335 (433)
+++..|+.. .......++++++..+.++++ +|... ..+.+.+..+..+.++.+.+|+++. .+
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i-~G~g~------------~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~ 228 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVL-AGPAW------------EPEYFDEITRRYGSTVEPIGEVGGERRLDL 228 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEE-ESCCC------------CHHHHHHHHHHHTTTEEECCCCCHHHHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEE-EeCcc------------cHHHHHHHHHHhCCCEEEeccCCHHHHHHH
Confidence 345567765 233355666776666777554 55431 1123333222224789999999976 67
Q ss_pred hccCCcceEE--ec-----------CC-chhHHHHHhcCCceEecccccchhhHHHHHHH--HhcceEEEccCCCCcccH
Q 041323 336 LSHKSTGAFL--SY-----------CG-WNSALESLSQGLPMIGWPIAAEQTYNSKMLVE--EMGMAVELTRGVQSTIVG 399 (433)
Q Consensus 336 l~~~~v~~~i--th-----------gG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~--~~G~g~~l~~~~~~~~~~ 399 (433)
+..+++ +| ++ -| .+++.||+++|+|+|+.... .+...+.+ . +.|..++ . +.
T Consensus 229 ~~~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~-~~g~~~~-----~-d~ 295 (342)
T 2iuy_A 229 LASAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGE-VVGYGTD-----F-AP 295 (342)
T ss_dssp HHHCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGGGEE-ECCSSSC-----C-CH
T ss_pred HHhCCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcccCC-CceEEcC-----C-CH
Confidence 888886 44 22 23 46899999999999987652 34444444 2 4555443 3 78
Q ss_pred HHHHHHHHHHhc
Q 041323 400 HDVKNVIEMVMD 411 (433)
Q Consensus 400 ~~l~~ai~~vl~ 411 (433)
++++++|.++++
T Consensus 296 ~~l~~~i~~l~~ 307 (342)
T 2iuy_A 296 DEARRTLAGLPA 307 (342)
T ss_dssp HHHHHHHHTSCC
T ss_pred HHHHHHHHHHHH
Confidence 999999998886
No 37
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=97.99 E-value=2e-05 Score=77.53 Aligned_cols=87 Identities=11% Similarity=0.085 Sum_probs=64.3
Q ss_pred CCCeEEecccCh---HHhhccCCcceEEecCCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcc
Q 041323 321 KQGLLVRNWAPQ---LEILSHKSTGAFLSYCGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTI 397 (433)
Q Consensus 321 ~~~v~~~~~~pq---~~il~~~~v~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~ 397 (433)
..++.+.+++++ ..++++++ ++|+..|..+ .||.++|+|+|++|-..+++. +.+. |.|+.+..
T Consensus 281 ~~~v~l~~~l~~~~~~~l~~~ad--~vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~~------ 346 (403)
T 3ot5_A 281 HERIHLIEPLDAIDFHNFLRKSY--LVFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIGT------ 346 (403)
T ss_dssp CTTEEEECCCCHHHHHHHHHHEE--EEEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECCS------
T ss_pred CCCEEEeCCCCHHHHHHHHHhcC--EEEECCccHH-HHHHHhCCCEEEecCCCcchh----heeC-CcEEEcCC------
Confidence 357888898874 35677888 5898875333 699999999999976666654 2455 98877753
Q ss_pred cHHHHHHHHHHHhcCCchhHHHHH
Q 041323 398 VGHDVKNVIEMVMDEAGKGQEMKA 421 (433)
Q Consensus 398 ~~~~l~~ai~~vl~~~~~~~~~~~ 421 (433)
+.++|.+++.++++|++..++|++
T Consensus 347 d~~~l~~ai~~ll~~~~~~~~m~~ 370 (403)
T 3ot5_A 347 NKENLIKEALDLLDNKESHDKMAQ 370 (403)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCHHHHHHHHh
Confidence 689999999999988744444443
No 38
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.96 E-value=7.6e-05 Score=63.12 Aligned_cols=145 Identities=12% Similarity=0.093 Sum_probs=87.2
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHHHHhC----CCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccCh
Q 041323 257 SVLYISFGSQNTISSSQTMELAIGLEAS----AKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQ 332 (433)
Q Consensus 257 ~vv~vs~GS~~~~~~~~~~~~~~al~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq 332 (433)
+++++..|+... ...+..+++++... +.+ ++.+|... ..+.+.......+.++.+ +|+|+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~-l~i~G~g~------------~~~~~~~~~~~~~~~v~~-g~~~~ 65 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIV-LLLKGKGP------------DEKKIKLLAQKLGVKAEF-GFVNS 65 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEE-EEEECCST------------THHHHHHHHHHHTCEEEC-CCCCH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeE-EEEEeCCc------------cHHHHHHHHHHcCCeEEE-eecCH
Confidence 467778888763 23344555555543 234 33445321 123333333322447788 99986
Q ss_pred HH---hhccCCcceEEe----cCCchhHHHHHhcCC-ceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHH
Q 041323 333 LE---ILSHKSTGAFLS----YCGWNSALESLSQGL-PMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKN 404 (433)
Q Consensus 333 ~~---il~~~~v~~~it----hgG~~s~~eal~~Gv-P~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ 404 (433)
.+ ++..+++ +|. -|...++.||+++|+ |+|+-...+. ....+.+. +. .+.. -+.+++.+
T Consensus 66 ~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~~~~-~~--~~~~-----~~~~~l~~ 132 (166)
T 3qhp_A 66 NELLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFALDE-RS--LFEP-----NNAKDLSA 132 (166)
T ss_dssp HHHHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGCSSG-GG--EECT-----TCHHHHHH
T ss_pred HHHHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhccCC-ce--EEcC-----CCHHHHHH
Confidence 54 6777875 553 233469999999996 9998332111 11112221 33 3332 37899999
Q ss_pred HHHHHhcCCchhHHHHHHHHHHHHHH
Q 041323 405 VIEMVMDEAGKGQEMKAKAEKIGRQI 430 (433)
Q Consensus 405 ai~~vl~~~~~~~~~~~~a~~l~~~~ 430 (433)
+|.++++|++..+.+.+++++..+.+
T Consensus 133 ~i~~l~~~~~~~~~~~~~~~~~~~~~ 158 (166)
T 3qhp_A 133 KIDWWLENKLERERMQNEYAKSALNY 158 (166)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHC
Confidence 99999999877778888888876544
No 39
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=97.95 E-value=0.00052 Score=73.04 Aligned_cols=94 Identities=11% Similarity=0.103 Sum_probs=63.4
Q ss_pred CCeEEecc----cChHHhhc----cCCcceEEec----CCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEE
Q 041323 322 QGLLVRNW----APQLEILS----HKSTGAFLSY----CGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVEL 389 (433)
Q Consensus 322 ~~v~~~~~----~pq~~il~----~~~v~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l 389 (433)
.++.+.++ +|+.++.. .+++ ||.= +-..++.||+++|+|+|+-. .......+.+. ..|+.+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV~dg-~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVHG-KSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHCCBT-TTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHHccC-CcEEEe
Confidence 57777774 44455443 3454 5532 33469999999999999863 33344445553 678888
Q ss_pred ccCCCCcccHHHHHHHHHHHh----cCCchhHHHHHHHHHHH
Q 041323 390 TRGVQSTIVGHDVKNVIEMVM----DEAGKGQEMKAKAEKIG 427 (433)
Q Consensus 390 ~~~~~~~~~~~~l~~ai~~vl----~~~~~~~~~~~~a~~l~ 427 (433)
+. -+.++++++|.+++ .|++..+.+.+++++..
T Consensus 713 ~p-----~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a 749 (816)
T 3s28_A 713 DP-----YHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749 (816)
T ss_dssp CT-----TSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred CC-----CCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 75 36788888887666 88877777888877755
No 40
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=97.89 E-value=6.2e-05 Score=73.46 Aligned_cols=141 Identities=16% Similarity=0.139 Sum_probs=87.9
Q ss_pred HHHhhhcCCCCcEEEEEeCCCCCCC-HHHHHHHHHHHHhC----CCeEEEEEcCCCCCCCCccccccCCchhHHHH---h
Q 041323 246 IIEWLDLHHPGSVLYISFGSQNTIS-SSQTMELAIGLEAS----AKSFLWVIRPPVGFDLRGEFRSERLPEGFEER---I 317 (433)
Q Consensus 246 l~~~l~~~~~~~vv~vs~GS~~~~~-~~~~~~~~~al~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 317 (433)
+.+.++-.+ ++.|++++|...... .+.+..+++++.+. +..+|+..+.. +.+.+.+. .
T Consensus 194 ~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~-------------~~~~l~~~~~~~ 259 (385)
T 4hwg_A 194 ILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR-------------TKKRLEDLEGFK 259 (385)
T ss_dssp HHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH-------------HHHHHHTSGGGG
T ss_pred HHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH-------------HHHHHHHHHHHh
Confidence 344444333 458899988765433 24456666666542 57777765421 00111110 1
Q ss_pred hhcCCCeEEecccCh---HHhhccCCcceEEecCCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCC
Q 041323 318 EETKQGLLVRNWAPQ---LEILSHKSTGAFLSYCGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQ 394 (433)
Q Consensus 318 ~~~~~~v~~~~~~pq---~~il~~~~v~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~ 394 (433)
. ...++.+.+.+++ ..++++++ ++|+-.|. .+.||.+.|+|+|+++...+.+. ..+. |.++.+..
T Consensus 260 ~-~~~~v~l~~~lg~~~~~~l~~~ad--lvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~~--- 327 (385)
T 4hwg_A 260 E-LGDKIRFLPAFSFTDYVKLQMNAF--CILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-GTLIMSGF--- 327 (385)
T ss_dssp G-TGGGEEECCCCCHHHHHHHHHHCS--EEEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECCS---
T ss_pred c-CCCCEEEEcCCCHHHHHHHHHhCc--EEEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcCC---
Confidence 0 0246777665554 46788888 58999886 46899999999999987554222 2455 88877753
Q ss_pred CcccHHHHHHHHHHHhcCCch
Q 041323 395 STIVGHDVKNVIEMVMDEAGK 415 (433)
Q Consensus 395 ~~~~~~~l~~ai~~vl~~~~~ 415 (433)
+.++|.+++.++++|++.
T Consensus 328 ---d~~~i~~ai~~ll~d~~~ 345 (385)
T 4hwg_A 328 ---KAERVLQAVKTITEEHDN 345 (385)
T ss_dssp ---SHHHHHHHHHHHHTTCBT
T ss_pred ---CHHHHHHHHHHHHhChHH
Confidence 689999999999988643
No 41
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=97.89 E-value=6.2e-05 Score=72.57 Aligned_cols=86 Identities=12% Similarity=0.122 Sum_probs=62.0
Q ss_pred CCeEEecccChH---HhhccCCcceEEecCCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCccc
Q 041323 322 QGLLVRNWAPQL---EILSHKSTGAFLSYCGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIV 398 (433)
Q Consensus 322 ~~v~~~~~~pq~---~il~~~~v~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~ 398 (433)
.++.+.+++++. .+++.+++ ||+.+| +.+.||+++|+|+|+....+.. ..+.+. |.|..+.. +
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~-g~g~~v~~------d 328 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIEA-GTLKLAGT------D 328 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHHT-TSEEECCS------C
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeecC-CceEEcCC------C
Confidence 588887777754 56777884 888763 5588999999999988543332 224554 88887752 6
Q ss_pred HHHHHHHHHHHhcCCchhHHHHH
Q 041323 399 GHDVKNVIEMVMDEAGKGQEMKA 421 (433)
Q Consensus 399 ~~~l~~ai~~vl~~~~~~~~~~~ 421 (433)
.++++++|.++++|++..++|.+
T Consensus 329 ~~~la~~i~~ll~~~~~~~~~~~ 351 (375)
T 3beo_A 329 EETIFSLADELLSDKEAHDKMSK 351 (375)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHCC
T ss_pred HHHHHHHHHHHHhChHhHhhhhh
Confidence 89999999999998744444433
No 42
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.84 E-value=0.00066 Score=59.05 Aligned_cols=146 Identities=11% Similarity=0.043 Sum_probs=92.7
Q ss_pred EEEEeCCCC-C-CCHHHHHHHHHHHH--h--CCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEE-ecccC
Q 041323 259 LYISFGSQN-T-ISSSQTMELAIGLE--A--SAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLV-RNWAP 331 (433)
Q Consensus 259 v~vs~GS~~-~-~~~~~~~~~~~al~--~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~p 331 (433)
+++..|+.. . ...+.+.+.+..+. + .+.++++ +|.. . ....+.+.......+ ++.+ .+|++
T Consensus 38 ~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i-~G~~-------~---~~~~~~l~~~~~~~~-~v~~~~g~~~ 105 (200)
T 2bfw_A 38 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFII-IGKG-------D---PELEGWARSLEEKHG-NVKVITEMLS 105 (200)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEE-ECCB-------C---HHHHHHHHHHHHHCT-TEEEECSCCC
T ss_pred EEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEE-ECCC-------C---hHHHHHHHHHHHhcC-CEEEEeccCC
Confidence 666778876 3 23455555555553 2 2345444 4432 0 001123333333223 8888 99999
Q ss_pred hH---HhhccCCcceEEec----CCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHH
Q 041323 332 QL---EILSHKSTGAFLSY----CGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKN 404 (433)
Q Consensus 332 q~---~il~~~~v~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ 404 (433)
+. .++..+++ +|.- +...++.||+++|+|+|+... ......+ +. +.|..+.. -+.+++.+
T Consensus 106 ~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~-----~~~~~l~~ 172 (200)
T 2bfw_A 106 REFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA-----GDPGELAN 172 (200)
T ss_dssp HHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT-----TCHHHHHH
T ss_pred HHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC-----CCHHHHHH
Confidence 54 46778885 5532 224689999999999998753 3344445 43 78888864 36899999
Q ss_pred HHHHHhc-CCchhHHHHHHHHHHHHH
Q 041323 405 VIEMVMD-EAGKGQEMKAKAEKIGRQ 429 (433)
Q Consensus 405 ai~~vl~-~~~~~~~~~~~a~~l~~~ 429 (433)
+|.++++ |++..+.+.+++++..+.
T Consensus 173 ~i~~l~~~~~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 173 AILKALELSRSDLSKFRENCKKRAMS 198 (200)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 9999999 987777888888876654
No 43
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.53 E-value=0.00062 Score=66.02 Aligned_cols=97 Identities=16% Similarity=0.229 Sum_probs=70.5
Q ss_pred CeEEecccCh-HHhhccCCcceEEe--c--CCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcc
Q 041323 323 GLLVRNWAPQ-LEILSHKSTGAFLS--Y--CGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTI 397 (433)
Q Consensus 323 ~v~~~~~~pq-~~il~~~~v~~~it--h--gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~ 397 (433)
++.+.++... ..+++.+++ +|+. . +|..++.||+++|+|+|+-|..++.......+.+. |.++...
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv-~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~------- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI-AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK------- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE-EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC-------
T ss_pred cEEEECCHHHHHHHHHhCCE-EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC-------
Confidence 4555555443 347777775 3441 2 34578999999999999877767666666666565 8776653
Q ss_pred cHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Q 041323 398 VGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQ 429 (433)
Q Consensus 398 ~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~ 429 (433)
+.++++++|.++++| +.+++|.+++++..+.
T Consensus 332 d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 332 NETELVTKLTELLSV-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHh
Confidence 478999999999998 7888899998887654
No 44
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.44 E-value=0.0016 Score=66.55 Aligned_cols=150 Identities=8% Similarity=0.032 Sum_probs=94.8
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEE--EcCCCCCCCCccccccCCchhHHHHhh--hcCCCeEEecccC
Q 041323 256 GSVLYISFGSQNTISSSQTMELAIGLEASAKSFLWV--IRPPVGFDLRGEFRSERLPEGFEERIE--ETKQGLLVRNWAP 331 (433)
Q Consensus 256 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~p 331 (433)
+.++|.+|++.....++.+....+-+++.+..++|. .+... + .-.....+.. .-...+.+.+.+|
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~------g-----~~~~~~~~~~~~GI~~Rv~F~g~~p 508 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN------G-----ITHPYVERFIKSYLGDSATAHPHSP 508 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC------G-----GGHHHHHHHHHHHHGGGEEEECCCC
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc------h-----hhHHHHHHHHHcCCCccEEEcCCCC
Confidence 358999999988888888888888888877777774 34221 0 1111111110 0123567778888
Q ss_pred hHHh---hccCCcceEE---ecCCchhHHHHHhcCCceEecccccchhhH-HHHHHHHhcceE-EEccCCCCcccHHHHH
Q 041323 332 QLEI---LSHKSTGAFL---SYCGWNSALESLSQGLPMIGWPIAAEQTYN-SKMLVEEMGMAV-ELTRGVQSTIVGHDVK 403 (433)
Q Consensus 332 q~~i---l~~~~v~~~i---thgG~~s~~eal~~GvP~i~~P~~~dQ~~n-a~~~~~~~G~g~-~l~~~~~~~~~~~~l~ 403 (433)
+.+. +..+++ |+ ..+|.+|+.||+++|||+|+.+-..-.-.. +..+.. .|+.- .+.. +.++..
T Consensus 509 ~~e~la~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA~------d~eeYv 579 (631)
T 3q3e_A 509 YHQYLRILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIAN------TVDEYV 579 (631)
T ss_dssp HHHHHHHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEES------SHHHHH
T ss_pred HHHHHHHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceecC------CHHHHH
Confidence 7654 466775 43 237789999999999999998743211122 233444 47654 2432 467777
Q ss_pred HHHHHHhcCCchhHHHHHHHHH
Q 041323 404 NVIEMVMDEAGKGQEMKAKAEK 425 (433)
Q Consensus 404 ~ai~~vl~~~~~~~~~~~~a~~ 425 (433)
+...++.+|++..+.+|+++++
T Consensus 580 ~~Av~La~D~~~l~~LR~~Lr~ 601 (631)
T 3q3e_A 580 ERAVRLAENHQERLELRRYIIE 601 (631)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHH
Confidence 6777788888666677776654
No 45
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.42 E-value=0.0019 Score=65.94 Aligned_cols=97 Identities=14% Similarity=0.146 Sum_probs=69.1
Q ss_pred CCeEEecccChH---HhhccCCcceEE--e-cCCchhHHHHHhcCCceEecccccchh-hHHHHHHHHhcceEEEccCCC
Q 041323 322 QGLLVRNWAPQL---EILSHKSTGAFL--S-YCGWNSALESLSQGLPMIGWPIAAEQT-YNSKMLVEEMGMAVELTRGVQ 394 (433)
Q Consensus 322 ~~v~~~~~~pq~---~il~~~~v~~~i--t-hgG~~s~~eal~~GvP~i~~P~~~dQ~-~na~~~~~~~G~g~~l~~~~~ 394 (433)
.+|.+.+++|+. .++..+++ || + .|+.+++.||+++|+|+|+.|-..-.. ..+..+... |+...+..
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~~--- 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNVA--- 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBCS---
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhcC---
Confidence 578899999854 45777885 55 2 255678999999999999977431111 123455553 77655542
Q ss_pred CcccHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Q 041323 395 STIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIG 427 (433)
Q Consensus 395 ~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~ 427 (433)
+.+++.+++.++++|++..+.+++++++..
T Consensus 508 ---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 537 (568)
T 2vsy_A 508 ---DDAAFVAKAVALASDPAALTALHARVDVLR 537 (568)
T ss_dssp ---SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHhcCHHHHHHHHHHHHHhh
Confidence 789999999999999866777777776654
No 46
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.41 E-value=0.0011 Score=69.89 Aligned_cols=150 Identities=17% Similarity=0.228 Sum_probs=95.9
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHh---hhcCCCeEEecccC
Q 041323 255 PGSVLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERI---EETKQGLLVRNWAP 331 (433)
Q Consensus 255 ~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~p 331 (433)
++.|+|.||-+....+++.+..-++-|++.+--++|....+. . ..+.+.... ...+..+++.+..|
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~-------~----~~~~l~~~~~~~gi~~~r~~f~~~~~ 589 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA-------V----GEPNIQQYAQNMGLPQNRIIFSPVAP 589 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG-------G----GHHHHHHHHHHTTCCGGGEEEEECCC
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH-------H----HHHHHHHHHHhcCCCcCeEEECCCCC
Confidence 355899999888888999998888888888888899887541 0 011222211 11245677888888
Q ss_pred hHHhh---ccCCcceEEe---cCCchhHHHHHhcCCceEecccccchhhHH-HHHHHHhcceEEEccCCCCcccHHH-HH
Q 041323 332 QLEIL---SHKSTGAFLS---YCGWNSALESLSQGLPMIGWPIAAEQTYNS-KMLVEEMGMAVELTRGVQSTIVGHD-VK 403 (433)
Q Consensus 332 q~~il---~~~~v~~~it---hgG~~s~~eal~~GvP~i~~P~~~dQ~~na-~~~~~~~G~g~~l~~~~~~~~~~~~-l~ 403 (433)
..+-| ..++ +++- .+|.+|+.|||++|||+|.++--.---..+ ..+.. +|+.-.+-. +.++ +.
T Consensus 590 ~~~~l~~~~~~D--i~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia~------~~~~Y~~ 660 (723)
T 4gyw_A 590 KEEHVRRGQLAD--VCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIAK------NRQEYED 660 (723)
T ss_dssp HHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBCS------SHHHHHH
T ss_pred HHHHHHHhCCCe--EEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCcccccC------CHHHHHH
Confidence 66533 4455 4765 889999999999999999998422222233 34454 587655543 3333 44
Q ss_pred HHHHHHhcCCchhHHHHHHHHH
Q 041323 404 NVIEMVMDEAGKGQEMKAKAEK 425 (433)
Q Consensus 404 ~ai~~vl~~~~~~~~~~~~a~~ 425 (433)
.|| ++-+|.++...+|++.++
T Consensus 661 ~a~-~la~d~~~l~~lr~~l~~ 681 (723)
T 4gyw_A 661 IAV-KLGTDLEYLKKVRGKVWK 681 (723)
T ss_dssp HHH-HHHHCHHHHHHHHHHHHH
T ss_pred HHH-HHhcCHHHHHHHHHHHHH
Confidence 444 454566555555555443
No 47
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=97.31 E-value=0.0061 Score=59.44 Aligned_cols=94 Identities=16% Similarity=0.121 Sum_probs=68.2
Q ss_pred CCCeEEecccC---h---HHhhccCCcceEEecC----CchhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEc
Q 041323 321 KQGLLVRNWAP---Q---LEILSHKSTGAFLSYC----GWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELT 390 (433)
Q Consensus 321 ~~~v~~~~~~p---q---~~il~~~~v~~~ithg----G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~ 390 (433)
..++.+.+|++ + ..++..+++ +|.-. ..+++.||+++|+|+|+.+. ..+...+.+. +.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 36888888776 2 246777885 55433 45789999999999998764 3344555553 6777774
Q ss_pred cCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Q 041323 391 RGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGR 428 (433)
Q Consensus 391 ~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~ 428 (433)
+.++++++|.++++|++..+.+.+++++..+
T Consensus 365 -------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~ 395 (416)
T 2x6q_A 365 -------DANEAVEVVLYLLKHPEVSKEMGAKAKERVR 395 (416)
T ss_dssp -------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 5789999999999988666777777776543
No 48
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.08 E-value=0.0034 Score=61.17 Aligned_cols=90 Identities=9% Similarity=0.035 Sum_probs=61.5
Q ss_pred eEEecccChHH---hhccCCcceEEe----cCCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcc-----------
Q 041323 324 LLVRNWAPQLE---ILSHKSTGAFLS----YCGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGM----------- 385 (433)
Q Consensus 324 v~~~~~~pq~~---il~~~~v~~~it----hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~----------- 385 (433)
+.+.+|+|+.+ ++..+++ +|. -|...++.||+++|+|+|+-.. ......+.+ |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~--~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSG--DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCT--TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHcc--Ccccccccccccc
Confidence 66779999554 6777886 442 2334689999999999998653 233333333 33
Q ss_pred -----eE--EEccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Q 041323 386 -----AV--ELTRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIG 427 (433)
Q Consensus 386 -----g~--~l~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~ 427 (433)
|. .+.. -+.++++++| ++++|++..+.+.+++++..
T Consensus 328 ~~~~~G~~gl~~~-----~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~ 370 (413)
T 3oy2_A 328 VDDRDGIGGIEGI-----IDVDDLVEAF-TFFKDEKNRKEYGKRVQDFV 370 (413)
T ss_dssp CTTTCSSCCEEEE-----CCHHHHHHHH-HHTTSHHHHHHHHHHHHHHH
T ss_pred cccccCcceeeCC-----CCHHHHHHHH-HHhcCHHHHHHHHHHHHHHH
Confidence 44 5543 2789999999 99999866667777776653
No 49
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=96.88 E-value=0.0076 Score=60.07 Aligned_cols=143 Identities=7% Similarity=-0.027 Sum_probs=85.2
Q ss_pred EEEEEeCCCCCC-CHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeE-EecccChH--
Q 041323 258 VLYISFGSQNTI-SSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLL-VRNWAPQL-- 333 (433)
Q Consensus 258 vv~vs~GS~~~~-~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~pq~-- 333 (433)
.+++..|..... ..+.+.+.+..+.+.+.+++++ |... ..+.+.+.+.....+.++. ..++ ++.
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~iv-G~g~----------~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~ 359 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVL-GAGD----------VALEGALLAAASRHHGRVGVAIGY-NEPLS 359 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEE-ECBC----------HHHHHHHHHHHHHTTTTEEEEESC-CHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEE-eCCc----------hHHHHHHHHHHHhCCCcEEEecCC-CHHHH
Confidence 367778887642 2344444444454456775554 4320 0011223333332245776 6677 543
Q ss_pred -HhhccCCcceEEe----cCCchhHHHHHhcCCceEecccccchhhHHHHHHHHh---------cceEEEccCCCCcccH
Q 041323 334 -EILSHKSTGAFLS----YCGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEM---------GMAVELTRGVQSTIVG 399 (433)
Q Consensus 334 -~il~~~~v~~~it----hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~---------G~g~~l~~~~~~~~~~ 399 (433)
.++..+++ ||. -|-..++.||+++|+|+|+-.. ......+.+ - +.|..+.. -+.
T Consensus 360 ~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~ 427 (485)
T 1rzu_A 360 HLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFSP-----VTL 427 (485)
T ss_dssp HHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEESS-----CSH
T ss_pred HHHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeCC-----CCH
Confidence 46888886 552 2335689999999999998754 223333332 1 47888864 368
Q ss_pred HHHHHHHHHHh---cCCchhHHHHHHHH
Q 041323 400 HDVKNVIEMVM---DEAGKGQEMKAKAE 424 (433)
Q Consensus 400 ~~l~~ai~~vl---~~~~~~~~~~~~a~ 424 (433)
++++++|.+++ +|++..+.+.++++
T Consensus 428 ~~la~~i~~ll~~~~~~~~~~~~~~~~~ 455 (485)
T 1rzu_A 428 DGLKQAIRRTVRYYHDPKLWTQMQKLGM 455 (485)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999999999 67755556666554
No 50
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.62 E-value=0.0032 Score=60.07 Aligned_cols=95 Identities=15% Similarity=0.156 Sum_probs=70.9
Q ss_pred CeEEecccChHHhh---ccCCcceEEecCC-c---------hhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEE
Q 041323 323 GLLVRNWAPQLEIL---SHKSTGAFLSYCG-W---------NSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVEL 389 (433)
Q Consensus 323 ~v~~~~~~pq~~il---~~~~v~~~ithgG-~---------~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l 389 (433)
|+...+|+|+.++. +.++.+ +|..-| + +-+.|++++|+|+|+.+ ...++..+++. |+|+.+
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~-lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~ 288 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFG-LVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIV 288 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEE-ECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEE
T ss_pred CEEEeCCCCHHHHHHHHHhCCEE-EEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEe
Confidence 89999999998754 444553 343222 2 34789999999999865 45677888886 999998
Q ss_pred ccCCCCcccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHc
Q 041323 390 TRGVQSTIVGHDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIRH 432 (433)
Q Consensus 390 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 432 (433)
+ +.+++.++|.++. +++.++|++|+++.+++++.
T Consensus 289 ~-------~~~e~~~~i~~l~--~~~~~~m~~na~~~a~~~~~ 322 (339)
T 3rhz_A 289 K-------DVEEAIMKVKNVN--EDEYIELVKNVRSFNPILRK 322 (339)
T ss_dssp S-------SHHHHHHHHHHCC--HHHHHHHHHHHHHHTHHHHT
T ss_pred C-------CHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhhc
Confidence 6 2578888888764 33677899999999887764
No 51
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=96.45 E-value=0.012 Score=58.60 Aligned_cols=143 Identities=11% Similarity=0.023 Sum_probs=83.3
Q ss_pred EEEEEeCCCCC-CCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeE-EecccChH--
Q 041323 258 VLYISFGSQNT-ISSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLL-VRNWAPQL-- 333 (433)
Q Consensus 258 vv~vs~GS~~~-~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~pq~-- 333 (433)
.+++..|.... -..+.+.+.+..+.+.+.+++++ |... ....+.+.+...+.+.++. +.++ +..
T Consensus 293 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~iv-G~g~----------~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~ 360 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALL-GAGD----------PVLQEGFLAAAAEYPGQVGVQIGY-HEAFS 360 (485)
T ss_dssp CEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEE-EEEC----------HHHHHHHHHHHHHSTTTEEEEESC-CHHHH
T ss_pred eEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEE-eCCc----------hHHHHHHHHHHHhCCCcEEEeCCC-CHHHH
Confidence 45666677653 23344444444444446665554 4220 0011223333332345775 6677 543
Q ss_pred -HhhccCCcceEEe----cCCchhHHHHHhcCCceEecccccchhhHHHHHHHHh---------cceEEEccCCCCcccH
Q 041323 334 -EILSHKSTGAFLS----YCGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEM---------GMAVELTRGVQSTIVG 399 (433)
Q Consensus 334 -~il~~~~v~~~it----hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~---------G~g~~l~~~~~~~~~~ 399 (433)
.+++.+++ ||. -|-.+++.||+++|+|+|+-.. ......+.+ - +.|..+.. -+.
T Consensus 361 ~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~ 428 (485)
T 2qzs_A 361 HRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFED-----SNA 428 (485)
T ss_dssp HHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEECS-----SSH
T ss_pred HHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEECC-----CCH
Confidence 56888886 552 2334688999999999998754 223333332 1 47888864 368
Q ss_pred HHHHHHHHHHh---cCCchhHHHHHHHH
Q 041323 400 HDVKNVIEMVM---DEAGKGQEMKAKAE 424 (433)
Q Consensus 400 ~~l~~ai~~vl---~~~~~~~~~~~~a~ 424 (433)
++++++|.+++ +|++..+.+.++++
T Consensus 429 ~~la~~i~~ll~~~~~~~~~~~~~~~~~ 456 (485)
T 2qzs_A 429 WSLLRAIRRAFVLWSRPSLWRFVQRQAM 456 (485)
T ss_dssp HHHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 99999999999 67755556666654
No 52
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=93.67 E-value=0.1 Score=51.00 Aligned_cols=80 Identities=15% Similarity=0.018 Sum_probs=55.7
Q ss_pred CCeEEecccChHH---hhccCCcceEEe--c-CCc-hhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCCC
Q 041323 322 QGLLVRNWAPQLE---ILSHKSTGAFLS--Y-CGW-NSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQ 394 (433)
Q Consensus 322 ~~v~~~~~~pq~~---il~~~~v~~~it--h-gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~ 394 (433)
.++.+.+++|+.+ +++.+++ ||. . =|. .++.||+++|+|+|+ -..+ ....+++. ..|+.+..
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~--- 363 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ--- 363 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS---
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC---
Confidence 4678889998764 5677885 553 2 133 578999999999997 2222 11233442 46888864
Q ss_pred CcccHHHHHHHHHHHhcCCc
Q 041323 395 STIVGHDVKNVIEMVMDEAG 414 (433)
Q Consensus 395 ~~~~~~~l~~ai~~vl~~~~ 414 (433)
-+.++++++|.++++|++
T Consensus 364 --~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 364 --LNPENIAETLVELCMSFN 381 (413)
T ss_dssp --CSHHHHHHHHHHHHHHTC
T ss_pred --CCHHHHHHHHHHHHcCHH
Confidence 368999999999998873
No 53
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=92.94 E-value=0.58 Score=45.32 Aligned_cols=75 Identities=13% Similarity=-0.003 Sum_probs=56.3
Q ss_pred CCCeEEecccChHH---hhccCCcceEEe---cCC-chhHHHHH-------hcCCceEecccccchhhHHHHHHHHhcce
Q 041323 321 KQGLLVRNWAPQLE---ILSHKSTGAFLS---YCG-WNSALESL-------SQGLPMIGWPIAAEQTYNSKMLVEEMGMA 386 (433)
Q Consensus 321 ~~~v~~~~~~pq~~---il~~~~v~~~it---hgG-~~s~~eal-------~~GvP~i~~P~~~dQ~~na~~~~~~~G~g 386 (433)
..+|.+.+++|+.+ ++..+++ ||. +-| .+++.||+ ++|+|+|+-.. +.+. ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 46788999998754 6777886 442 233 46789999 99999998754 4443 568
Q ss_pred EE-EccCCCCcccHHHHHHHHHHHhcCC
Q 041323 387 VE-LTRGVQSTIVGHDVKNVIEMVMDEA 413 (433)
Q Consensus 387 ~~-l~~~~~~~~~~~~l~~ai~~vl~~~ 413 (433)
.. +.. -+.++++++|.++++|+
T Consensus 331 ~l~v~~-----~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 331 RFGYTP-----GNADSVIAAITQALEAP 353 (406)
T ss_dssp EEEECT-----TCHHHHHHHHHHHHHCC
T ss_pred EEEeCC-----CCHHHHHHHHHHHHhCc
Confidence 77 654 36899999999999876
No 54
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=92.62 E-value=1 Score=45.50 Aligned_cols=147 Identities=9% Similarity=-0.041 Sum_probs=77.8
Q ss_pred EEEEeCCCCC-CCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChH---H
Q 041323 259 LYISFGSQNT-ISSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQL---E 334 (433)
Q Consensus 259 v~vs~GS~~~-~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~---~ 334 (433)
+++..|.... -..+.+.+.+..+.+.+.++++...+. .. ....+.......+.++.+..+.+.. .
T Consensus 329 ~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~--------~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 397 (536)
T 3vue_A 329 LIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGK--------KK---FEKLLKSMEEKYPGKVRAVVKFNAPLAHL 397 (536)
T ss_dssp EEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBC--------HH---HHHHHHHHHHHSTTTEEEECSCCHHHHHH
T ss_pred EEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccC--------ch---HHHHHHHHHhhcCCceEEEEeccHHHHHH
Confidence 4555677653 123444444444445567765543221 00 1111222222235677777777764 3
Q ss_pred hhccCCcceEEec---CC-chhHHHHHhcCCceEecccccchhhHHHHHHHHhcceEEEccCC-C----CcccHHHHHHH
Q 041323 335 ILSHKSTGAFLSY---CG-WNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGV-Q----STIVGHDVKNV 405 (433)
Q Consensus 335 il~~~~v~~~ith---gG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~-~----~~~~~~~l~~a 405 (433)
+++.+++ ||.= =| ..+++||+++|+|+|+-.. .-....+.+. ..|....... + ...+.+.++++
T Consensus 398 ~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~a 470 (536)
T 3vue_A 398 IMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAAT 470 (536)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHH
T ss_pred HHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCC-CCccccccCCCceeEECCCCHHHHHHH
Confidence 6777775 5532 12 3589999999999998643 2333444442 4565443210 0 12356889999
Q ss_pred HHHHhc--CCchhHHHHHHH
Q 041323 406 IEMVMD--EAGKGQEMKAKA 423 (433)
Q Consensus 406 i~~vl~--~~~~~~~~~~~a 423 (433)
|++++. +....+++.+|+
T Consensus 471 i~ral~~~~~~~~~~~~~~a 490 (536)
T 3vue_A 471 LKRAIKVVGTPAYEEMVRNC 490 (536)
T ss_dssp HHHHHHHTTSHHHHHHHHHH
T ss_pred HHHHHHhcCcHHHHHHHHHH
Confidence 988774 332344444444
No 55
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=88.33 E-value=0.3 Score=49.44 Aligned_cols=37 Identities=11% Similarity=0.236 Sum_probs=29.1
Q ss_pred CCcEEEEeCC--------CCcccHHHHHHHHHHHHhcCCcEEEEEeCC
Q 041323 4 ENEHTVMLPL--------MAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (433)
Q Consensus 4 ~~~~il~~~~--------~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (433)
.+||||++++ |+.|++ .-.|+++|++ +||+|++++|.
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~-~G~~V~Vi~P~ 52 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAA-NGHRVMVISPR 52 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHT-TTCEEEEEEEC
T ss_pred CCcEEEEEEEeccchhccCcHHHH--HHHHHHHHHH-cCCeEEEEecC
Confidence 5799999972 333444 5689999999 99999999853
No 56
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=84.68 E-value=2.9 Score=39.46 Aligned_cols=46 Identities=17% Similarity=0.122 Sum_probs=40.8
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcC--CcEEEEEeCCCchhhhhh
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRST--GFKITIANTPLNIQYLQN 51 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~r--Gh~Vt~~~~~~~~~~~~~ 51 (433)
..+|+++-....||+.=.+++.+.|++ + +.++++++.+.+.+.++.
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~-~~P~a~I~~l~~~~~~~l~~~ 55 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRK-AAPHSHITYVIDEKLQQVMEY 55 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHH-HCTTSEEEEEEEGGGGGGTSS
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHH-HCCCCEEEEEECcchhHHHhc
Confidence 469999999999999999999999999 6 999999998887766665
No 57
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=83.43 E-value=18 Score=30.33 Aligned_cols=78 Identities=13% Similarity=0.036 Sum_probs=44.2
Q ss_pred eEEecccChHH-hhccCCcceEEecCCchhHHHH---HhcCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcccH
Q 041323 324 LLVRNWAPQLE-ILSHKSTGAFLSYCGWNSALES---LSQGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVG 399 (433)
Q Consensus 324 v~~~~~~pq~~-il~~~~v~~~ithgG~~s~~ea---l~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~ 399 (433)
.++.++.+... ++..-+...++-=||.||+.|+ +.+++|++++|.+. .....+....--.+.+.. ++
T Consensus 91 ~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~~~------~~ 161 (176)
T 2iz6_A 91 PIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHVAA------DV 161 (176)
T ss_dssp EEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEEES------SH
T ss_pred eEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEEcC------CH
Confidence 34446666443 4443333467778899987655 67999999999832 111222222011233332 57
Q ss_pred HHHHHHHHHHh
Q 041323 400 HDVKNVIEMVM 410 (433)
Q Consensus 400 ~~l~~ai~~vl 410 (433)
+++.+.+.+.+
T Consensus 162 ~e~~~~l~~~~ 172 (176)
T 2iz6_A 162 AGAIAAVKQLL 172 (176)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777776654
No 58
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=82.53 E-value=0.82 Score=44.46 Aligned_cols=41 Identities=22% Similarity=0.184 Sum_probs=32.0
Q ss_pred CCCcEEEEeCCCCc-----ccHHHHHHHHHHHHhcCCcEEEEEeCCC
Q 041323 3 SENEHTVMLPLMAH-----GHLIPFLALAKQIHRSTGFKITIANTPL 44 (433)
Q Consensus 3 ~~~~~il~~~~~~~-----GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (433)
..+|||++++.... |=..-...||++|++ +||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~-~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDN-KKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCT-TTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHH-cCCceEEEEecC
Confidence 35789999884322 434568999999999 999999999753
No 59
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=81.84 E-value=8.9 Score=35.60 Aligned_cols=45 Identities=9% Similarity=0.062 Sum_probs=38.9
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcC--CcEEEEEeCCCchhhhhh
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRST--GFKITIANTPLNIQYLQN 51 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~r--Gh~Vt~~~~~~~~~~~~~ 51 (433)
|||+++.....||+.=...+.+.|++ + +.++++++.+.+.+.++.
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~-~~P~~~i~~l~~~~~~~l~~~ 47 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQA-RYPQAIIDVMAPAWCRPLLSR 47 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHH-HSTTCEEEEEECGGGHHHHTT
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHH-HCCCCEEEEEECcchhHHHhc
Confidence 58999999888999889999999998 6 999999999877666554
No 60
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=81.04 E-value=2.2 Score=44.00 Aligned_cols=97 Identities=7% Similarity=0.028 Sum_probs=54.2
Q ss_pred eEEecccCh---------HHhhccCCcceEEec---CC-chhHHHHHhcCCceEecccccchhhHHHHHHHH------hc
Q 041323 324 LLVRNWAPQ---------LEILSHKSTGAFLSY---CG-WNSALESLSQGLPMIGWPIAAEQTYNSKMLVEE------MG 384 (433)
Q Consensus 324 v~~~~~~pq---------~~il~~~~v~~~ith---gG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~------~G 384 (433)
+.+..|++. .+++..+++ ||.= =| ..+++||+++|+|+|+--..+ ....+.+. -+
T Consensus 495 If~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG----~~d~V~dg~~~~~~~~ 568 (725)
T 3nb0_A 495 IFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG----FGSYMEDLIETNQAKD 568 (725)
T ss_dssp EECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH----HHHHHHTTSCHHHHHH
T ss_pred EEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC----hhhhhhccccccCCCC
Confidence 344477766 357788885 5532 23 358999999999999865432 11112110 14
Q ss_pred ceEEEccCCCCcccH----HHHHHHHHHHhc-CCchhHHHHHHHHHHHH
Q 041323 385 MAVELTRGVQSTIVG----HDVKNVIEMVMD-EAGKGQEMKAKAEKIGR 428 (433)
Q Consensus 385 ~g~~l~~~~~~~~~~----~~l~~ai~~vl~-~~~~~~~~~~~a~~l~~ 428 (433)
.|+.+... ..-+. +.|++++.+++. ++..+..++++++++++
T Consensus 569 tG~lV~~r--d~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~ 615 (725)
T 3nb0_A 569 YGIYIVDR--RFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSD 615 (725)
T ss_dssp TTEEEECC--SSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGG
T ss_pred ceEEEeCC--CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 57666420 22234 445555555543 34345567777766554
No 61
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=80.36 E-value=5.2 Score=37.01 Aligned_cols=136 Identities=17% Similarity=0.075 Sum_probs=76.6
Q ss_pred CcEEEEEeCCCC---CCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccC-
Q 041323 256 GSVLYISFGSQN---TISSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAP- 331 (433)
Q Consensus 256 ~~vv~vs~GS~~---~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p- 331 (433)
++.|.+.-||.. ..+.+.+.++++.|.+.+.++++..++.. + ....+.+...-.++.+.+-.+
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~------e-------~~~~~~i~~~~~~~~l~g~~sl 244 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH------E-------EERAKRLAEGFAYVEVLPKMSL 244 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH------H-------HHHHHHHHTTCTTEEECCCCCH
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH------H-------HHHHHHHHhhCCcccccCCCCH
Confidence 457888888754 35678899999988777888776544320 0 111122211112333333222
Q ss_pred --hHHhhccCCcceEEec-CCchhHHHHHhcCCceEecccccchhhHHHHHHHHhcce-EEEcc--CCCCcccHHHHHHH
Q 041323 332 --QLEILSHKSTGAFLSY-CGWNSALESLSQGLPMIGWPIAAEQTYNSKMLVEEMGMA-VELTR--GVQSTIVGHDVKNV 405 (433)
Q Consensus 332 --q~~il~~~~v~~~ith-gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g-~~l~~--~~~~~~~~~~l~~a 405 (433)
-.+++++++ ++|+. .|.-.+ |.+.|+|+|++=-..|-..++ = +|-. ..+.. .+-..++.+++.++
T Consensus 245 ~el~ali~~a~--l~I~~DSG~~Hl--Aaa~g~P~v~lfg~t~p~~~~----P-~~~~~~~~~~~~~cm~~I~~~~V~~~ 315 (326)
T 2gt1_A 245 EGVARVLAGAK--FVVSVDTGLSHL--TAALDRPNITVYGPTDPGLIG----G-YGKNQMVCRAPGNELSQLTANAVKQF 315 (326)
T ss_dssp HHHHHHHHTCS--EEEEESSHHHHH--HHHTTCCEEEEESSSCHHHHC----C-CSSSEEEEECGGGCGGGCCHHHHHHH
T ss_pred HHHHHHHHhCC--EEEecCCcHHHH--HHHcCCCEEEEECCCChhhcC----C-CCCCceEecCCcccccCCCHHHHHHH
Confidence 345788888 59988 544444 666899999871111111110 0 1222 22221 11246899999999
Q ss_pred HHHHhcCC
Q 041323 406 IEMVMDEA 413 (433)
Q Consensus 406 i~~vl~~~ 413 (433)
+++++++.
T Consensus 316 i~~~l~~~ 323 (326)
T 2gt1_A 316 IEENAEKA 323 (326)
T ss_dssp HHHTTTTC
T ss_pred HHHHHHHh
Confidence 99999764
No 62
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=80.04 E-value=2.3 Score=40.80 Aligned_cols=41 Identities=10% Similarity=-0.010 Sum_probs=33.4
Q ss_pred CCcEEEEeCCCC--cccHHHHHHHHHHHHhcCCcEEEEEeCCCc
Q 041323 4 ENEHTVMLPLMA--HGHLIPFLALAKQIHRSTGFKITIANTPLN 45 (433)
Q Consensus 4 ~~~~il~~~~~~--~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~ 45 (433)
.+|||+++.... -|+-..+..|++.|++ +||+|++++....
T Consensus 39 ~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~-~G~~v~v~~~~~~ 81 (416)
T 2x6q_A 39 KGRSFVHVNSTSFGGGVAEILHSLVPLLRS-IGIEARWFVIEGP 81 (416)
T ss_dssp TTCEEEEEESCSSSSTHHHHHHHHHHHHHH-TTCEEEEEECCCC
T ss_pred hccEEEEEeCCCCCCCHHHHHHHHHHHHHh-CCCeEEEEEccCC
Confidence 368999887543 4788888999999999 9999999886544
No 63
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=77.93 E-value=2.6 Score=36.69 Aligned_cols=48 Identities=13% Similarity=0.034 Sum_probs=40.0
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhh
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (433)
|+.. .||++--.|+.|=+. .+.|.+.|.+ +|++|.++.++.-...+..
T Consensus 1 m~~~-k~IllgvTGaiaa~k-~~~ll~~L~~-~g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 1 MSGP-ERITLAMTGASGAQY-GLRLLDCLVQ-EEREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CCSC-SEEEEEECSSSCHHH-HHHHHHHHHH-TTCEEEEEECHHHHHHHHH
T ss_pred CCCC-CEEEEEEECHHHHHH-HHHHHHHHHH-CCCEEEEEECccHHHHHHH
Confidence 6655 488888888888877 9999999999 9999999998777666655
No 64
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=71.84 E-value=3.8 Score=40.12 Aligned_cols=38 Identities=11% Similarity=-0.000 Sum_probs=29.6
Q ss_pred cEEEEeCCC------CcccHHHHHHHHHHHHhcCCcEEEEEeCCC
Q 041323 6 EHTVMLPLM------AHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (433)
Q Consensus 6 ~~il~~~~~------~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (433)
|||++++.. .-|=-.-...||+.|++ +||+|+++++..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~-~G~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEA-HGVRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHT-TTCEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHH-cCCeEEEEeccc
Confidence 688888752 23445667889999999 999999998643
No 65
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=70.17 E-value=4.4 Score=39.68 Aligned_cols=38 Identities=11% Similarity=-0.028 Sum_probs=29.1
Q ss_pred cEEEEeCC---C---CcccHHHHHHHHHHHHhcCCcEEEEEeCCC
Q 041323 6 EHTVMLPL---M---AHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (433)
Q Consensus 6 ~~il~~~~---~---~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (433)
|||++++. | .-|=-.=...||++|++ +||+|+++++..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~-~G~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIA-DGVDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHH-TTCEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHH-cCCEEEEEecCc
Confidence 68888875 2 23434567789999999 999999998643
No 66
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=66.48 E-value=37 Score=31.37 Aligned_cols=85 Identities=13% Similarity=0.161 Sum_probs=52.9
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCc---hhhhhhhccCCCCCCCCCCceeEEEcCCCCCCCCCC
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLN---IQYLQNTISCANPNSPEKFNVNLVELPFCSLDHDLP 81 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~l~ 81 (433)
..||.|+-.+..| |=.+|+.|++ +||+|+..-.... .+.+++ .|+.+.. ... +
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~-~G~~V~~~D~~~~~~~~~~L~~------------~gi~v~~-g~~------~ 59 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKE-AGFEVSGCDAKMYPPMSTQLEA------------LGIDVYE-GFD------A 59 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHH-TTCEEEEEESSCCTTHHHHHHH------------TTCEEEE-SCC------G
T ss_pred CcEEEEEEECHHH----HHHHHHHHHh-CCCEEEEEcCCCCcHHHHHHHh------------CCCEEEC-CCC------H
Confidence 3589999999988 4469999999 9999999865332 234444 5777652 211 1
Q ss_pred CCCC-CCccEEEEcC-Ccc--cHHHHHHHhCCceEE
Q 041323 82 PNTE-NRELVFGSST-FFG--WAVDVAKSAGTTNVT 113 (433)
Q Consensus 82 ~~~~-~~~~~vv~d~-~~~--~a~~vA~~lgiP~v~ 113 (433)
.... ...++||... ... .-...|++.|||++.
T Consensus 60 ~~l~~~~~d~vV~Spgi~~~~p~~~~a~~~gi~v~~ 95 (326)
T 3eag_A 60 AQLDEFKADVYVIGNVAKRGMDVVEAILNLGLPYIS 95 (326)
T ss_dssp GGGGSCCCSEEEECTTCCTTCHHHHHHHHTTCCEEE
T ss_pred HHcCCCCCCEEEECCCcCCCCHHHHHHHHcCCcEEe
Confidence 1111 1123555543 322 344568889999875
No 67
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=65.73 E-value=7.1 Score=31.26 Aligned_cols=41 Identities=12% Similarity=0.108 Sum_probs=35.7
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCch
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNI 46 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~ 46 (433)
+++|++.+.+..+|-.-..-++..|.. .|++|.........
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~-~G~~Vi~lG~~~p~ 43 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTN-AGFNVVNIGVLSPQ 43 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHH-TTCEEEEEEEEECH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHH-CCCEEEECCCCCCH
Confidence 568999999999999999999999999 99999987753333
No 68
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=63.24 E-value=47 Score=27.55 Aligned_cols=38 Identities=8% Similarity=0.021 Sum_probs=28.3
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCC
Q 041323 256 GSVLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPP 295 (433)
Q Consensus 256 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~ 295 (433)
.|.|-|-+||.+ +....++....|++.|.++-..+-+.
T Consensus 12 ~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa 49 (173)
T 4grd_A 12 APLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA 49 (173)
T ss_dssp SCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc
Confidence 345788888887 56677888888899998876666544
No 69
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=60.15 E-value=11 Score=32.45 Aligned_cols=45 Identities=13% Similarity=0.056 Sum_probs=38.5
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhh
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYL 49 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~ 49 (433)
.+.+|++.+.++..|-....-++..|.. +||+|.++...-..+.+
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~-~G~~v~~LG~~vp~~~l 131 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLES-GGFTVYNLGVDIEPGKF 131 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHH-TTCEEEECCSSBCHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHH-CCCEEEECCCCCCHHHH
Confidence 3569999999999999999999999999 99999998865444433
No 70
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=57.53 E-value=22 Score=31.09 Aligned_cols=151 Identities=15% Similarity=0.061 Sum_probs=75.6
Q ss_pred hhhcCCCCcEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEec
Q 041323 249 WLDLHHPGSVLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRN 328 (433)
Q Consensus 249 ~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 328 (433)
|++-.. ++|++|..|.++ ...++.|.+.|..+.++... +.+.+..... ..++.+..
T Consensus 26 fl~L~g-k~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~--------------~~~~l~~l~~--~~~i~~i~ 81 (223)
T 3dfz_A 26 MLDLKG-RSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT--------------VSAEINEWEA--KGQLRVKR 81 (223)
T ss_dssp EECCTT-CCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS--------------CCHHHHHHHH--TTSCEEEC
T ss_pred EEEcCC-CEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC--------------CCHHHHHHHH--cCCcEEEE
Confidence 444443 447777665443 55667777788887766432 1122222222 22333322
Q ss_pred ccChHHhhccCCcceEEecCCchhHHHHHhc----CCceEecccccchhhHHH-----HHHHHhcceEEEccCCCCcccH
Q 041323 329 WAPQLEILSHKSTGAFLSYCGWNSALESLSQ----GLPMIGWPIAAEQTYNSK-----MLVEEMGMAVELTRGVQSTIVG 399 (433)
Q Consensus 329 ~~pq~~il~~~~v~~~ithgG~~s~~eal~~----GvP~i~~P~~~dQ~~na~-----~~~~~~G~g~~l~~~~~~~~~~ 399 (433)
..-+..-|..++ ++|.--|--.+.+.++. |+|+-+ .|.+..+. .+.+. ++-+.+..+.....-+
T Consensus 82 ~~~~~~dL~~ad--LVIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la 154 (223)
T 3dfz_A 82 KKVGEEDLLNVF--FIVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLT 154 (223)
T ss_dssp SCCCGGGSSSCS--EEEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHH
T ss_pred CCCCHhHhCCCC--EEEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHH
Confidence 222233455566 57777777666665543 444332 34443332 11221 3444444432334556
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHc
Q 041323 400 HDVKNVIEMVMDEAGKGQEMKAKAEKIGRQIRH 432 (433)
Q Consensus 400 ~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 432 (433)
..|++.|.+.+... -..+-+.+.++.+.+++
T Consensus 155 ~~iR~~ie~~lp~~--~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 155 KRIKEDLSSNYDES--YTQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHHHHHHHHSCTH--HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccHH--HHHHHHHHHHHHHHHHH
Confidence 77888888887432 23566667777666654
No 71
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=56.15 E-value=14 Score=34.42 Aligned_cols=40 Identities=8% Similarity=0.070 Sum_probs=31.4
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcC-C-cEEEEEeCCCch
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRST-G-FKITIANTPLNI 46 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~r-G-h~Vt~~~~~~~~ 46 (433)
+|+|++++ ++.++......++++|++ + | |+|.++++....
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~-~~~~~~v~~~~~~~~~ 49 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQK-HPEKIESIVTVTAQHR 49 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTT-CTTTEEEEEEECCSSS
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHh-CCCCCCeEEEEcCCCH
Confidence 58999997 457788888899999999 8 5 888777765543
No 72
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=55.63 E-value=87 Score=25.89 Aligned_cols=37 Identities=11% Similarity=-0.001 Sum_probs=27.3
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCC
Q 041323 257 SVLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPP 295 (433)
Q Consensus 257 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~ 295 (433)
|.|-|-+||.. +.+..++....|+..|.++-..+-+.
T Consensus 12 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa 48 (170)
T 1xmp_A 12 SLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA 48 (170)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec
Confidence 34777788877 56777888888889888876666543
No 73
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=55.58 E-value=10 Score=31.28 Aligned_cols=42 Identities=12% Similarity=0.174 Sum_probs=36.7
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCch
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNI 46 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~ 46 (433)
.+++|++.+.+..+|-.-..-++..|.. .||+|.+.......
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~-~G~eVi~lG~~~p~ 58 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRD-AGFEVVYTGLRQTP 58 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHH-TTCEEECCCSBCCH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHH-CCCEEEECCCCCCH
Confidence 4679999999999999999999999999 99999998754333
No 74
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=55.42 E-value=14 Score=33.07 Aligned_cols=40 Identities=10% Similarity=0.050 Sum_probs=36.0
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCC
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (433)
.+.+|++.+.+...|-....-++..|.. +|++|.++...-
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~-~G~~Vi~LG~~v 161 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRA-NGYNVVDLGRDV 161 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHH-TTCEEEEEEEEC
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHH-CCCEEEECCCCC
Confidence 4679999999999999999999999999 999999887433
No 75
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=55.36 E-value=12 Score=32.10 Aligned_cols=44 Identities=9% Similarity=0.033 Sum_probs=36.6
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcC-CcEEEEEeCCCchhhhhh
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRST-GFKITIANTPLNIQYLQN 51 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~r-Gh~Vt~~~~~~~~~~~~~ 51 (433)
|||++--.|+.|-+. ...|.+.|.+ + |++|.++.++.-.+.+..
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~-~~g~~V~vv~T~~A~~fi~~ 45 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALRE-MPNVETHLVMSKWAKTTIEL 45 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHT-CTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHh-ccCCEEEEEECchHHHHhHH
Confidence 478888888877766 9999999999 9 999999998777666664
No 76
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=54.66 E-value=64 Score=31.84 Aligned_cols=78 Identities=10% Similarity=0.032 Sum_probs=51.3
Q ss_pred CeEEecccChHH---hhccCCcceEEe--cCCch-hHHHHHhcC---CceEecccccchhhHHHHHHHHhcceEEEccCC
Q 041323 323 GLLVRNWAPQLE---ILSHKSTGAFLS--YCGWN-SALESLSQG---LPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGV 393 (433)
Q Consensus 323 ~v~~~~~~pq~~---il~~~~v~~~it--hgG~~-s~~eal~~G---vP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~ 393 (433)
.|.....+|+.+ ++..+++ ++++ +=|+| +..|++++| .|+|+--+.+ .+..+ . .-|+.++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv-~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l-~--~~allVnP-- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL-LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVL-G--EYCRSVNP-- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE-EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHH-G--GGSEEECT--
T ss_pred CEEEeCCCCHHHHHHHHHhccE-EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHh-C--CCEEEECC--
Confidence 466667888754 5566776 4444 45887 568999996 5655443322 12212 1 24788875
Q ss_pred CCcccHHHHHHHHHHHhcCC
Q 041323 394 QSTIVGHDVKNVIEMVMDEA 413 (433)
Q Consensus 394 ~~~~~~~~l~~ai~~vl~~~ 413 (433)
.+.++++++|.++|+++
T Consensus 423 ---~D~~~lA~AI~~aL~m~ 439 (496)
T 3t5t_A 423 ---FDLVEQAEAISAALAAG 439 (496)
T ss_dssp ---TBHHHHHHHHHHHHHCC
T ss_pred ---CCHHHHHHHHHHHHcCC
Confidence 47899999999999876
No 77
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=54.16 E-value=13 Score=31.95 Aligned_cols=48 Identities=15% Similarity=-0.046 Sum_probs=36.7
Q ss_pred CCCCCcEEEEeCCCCcccHH-HHHHHHHHHHhcCCcEEEEEeCCCchhhhh
Q 041323 1 MGSENEHTVMLPLMAHGHLI-PFLALAKQIHRSTGFKITIANTPLNIQYLQ 50 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~-P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~ 50 (433)
|+-.+.||++--.|+ +..+ =.+.|.+.|.+ +|++|.++.++.-.+.+.
T Consensus 3 m~l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~-~g~eV~vv~T~~A~~~i~ 51 (201)
T 3lqk_A 3 MNFAGKHVGFGLTGS-HCTYHEVLPQMERLVE-LGAKVTPFVTHTVQTTDT 51 (201)
T ss_dssp CCCTTCEEEEECCSC-GGGGGGTHHHHHHHHH-TTCEEEEECSSCSCCTTC
T ss_pred CCcCCCEEEEEEECh-HHHHHHHHHHHHHHhh-CCCEEEEEEChhHHHHHH
Confidence 443455888888877 5555 78999999999 999999998876654443
No 78
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=53.96 E-value=17 Score=30.47 Aligned_cols=44 Identities=2% Similarity=0.033 Sum_probs=35.8
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhh
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (433)
.||++.-.++.|=+. .+.|.+.|.+ +|++|.++.++.-.+.+..
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~-~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKS-KFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTT-TCSEEEEEECTGGGGGSCH
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHH-CCCEEEEEECcCHHHHhhH
Confidence 478888887777665 8999999999 9999999998877665544
No 79
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=53.60 E-value=19 Score=33.83 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=24.5
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcC
Q 041323 257 SVLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRP 294 (433)
Q Consensus 257 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~ 294 (433)
.||+.+.||.+. ..-...++++|.+.|.+++|+...
T Consensus 4 ~i~i~~GGTgGH--i~palala~~L~~~g~~V~~vg~~ 39 (365)
T 3s2u_A 4 NVLIMAGGTGGH--VFPALACAREFQARGYAVHWLGTP 39 (365)
T ss_dssp EEEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEECS
T ss_pred cEEEEcCCCHHH--HHHHHHHHHHHHhCCCEEEEEECC
Confidence 366666666542 122456888999999999998754
No 80
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=51.63 E-value=26 Score=32.67 Aligned_cols=73 Identities=12% Similarity=0.038 Sum_probs=55.0
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCC
Q 041323 270 SSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCG 349 (433)
Q Consensus 270 ~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG 349 (433)
+.+...++.+++.+..++.||.++++. .-.++.++++...+-++|. .||=+.-
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-------------------------g~~rlL~~lD~~~i~~~PK--~~~GySD 115 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGY-------------------------NSNGLLKYLDYDLIRENPK--FFCGYSD 115 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS-------------------------CGGGGGGGCCHHHHHTSCC--EEEECGG
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc-------------------------cHHHHHhhcChhHHHhCCe--EEEEecc
Confidence 356688899999999999999988752 0111346777777767787 5998888
Q ss_pred chhHHHHHh--cCCceEecccc
Q 041323 350 WNSALESLS--QGLPMIGWPIA 369 (433)
Q Consensus 350 ~~s~~eal~--~GvP~i~~P~~ 369 (433)
...++-+++ .|+..+--|..
T Consensus 116 iTaL~~al~~~~G~~t~hGp~~ 137 (331)
T 4e5s_A 116 ITALNNAIYTKTGLVTYSGPHF 137 (331)
T ss_dssp GHHHHHHHHHHHCBCEEECCCG
T ss_pred hHHHHHHHHHhhCCcEEEccch
Confidence 888888887 58888877764
No 81
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=51.44 E-value=19 Score=33.62 Aligned_cols=43 Identities=12% Similarity=0.026 Sum_probs=28.9
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcC-CcEEEEEeCCCc
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRST-GFKITIANTPLN 45 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~r-Gh~Vt~~~~~~~ 45 (433)
|....|||++++.. .+....+..|+++|.+ + ||+|.++++...
T Consensus 1 ~~~~mmkIl~v~~~-~~~~~~~~~l~~~L~~-~~g~~v~~~~~~~~ 44 (376)
T 1v4v_A 1 MEGGMKRVVLAFGT-RPEATKMAPVYLALRG-IPGLKPLVLLTGQH 44 (376)
T ss_dssp ---CCEEEEEEECS-HHHHHHHHHHHHHHHT-STTEEEEEEECSSC
T ss_pred CCCCceEEEEEEec-cHHHHHHHHHHHHHHh-CCCCceEEEEcCCc
Confidence 55555799999843 3334556778999999 9 899887765443
No 82
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=51.38 E-value=16 Score=31.10 Aligned_cols=72 Identities=7% Similarity=-0.138 Sum_probs=47.0
Q ss_pred HHHHHHhcCCcEEEEEeCCCchhhhhhhccCCCCCCCCCCc--eeEEEcCCCCCCCCCCCCCCCCccEEEEcCCcccHHH
Q 041323 25 LAKQIHRSTGFKITIANTPLNIQYLQNTISCANPNSPEKFN--VNLVELPFCSLDHDLPPNTENRELVFGSSTFFGWAVD 102 (433)
Q Consensus 25 LA~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~f~~l~~~~~~~~l~~~~~~~~~~vv~d~~~~~a~~ 102 (433)
+|++|.+ .|..||+++...-...+.. .. ++.+-+..+ ....+ .-++.-.-+.....
T Consensus 22 ta~eL~~-~gI~vtlI~Dsa~~~~m~~------------~~~~Vd~VivGAd----~v~~n-----G~v~nkiGT~~~Al 79 (191)
T 1w2w_B 22 TAYELVY-DKIPSTLITDSSIAYRIRT------------SPIPIKAAFVGAD----RIVRN-----GDTANKIGTLQLAV 79 (191)
T ss_dssp HHHHHHH-HTCCBEEBCGGGHHHHHHH------------CSSCEEEEEECCS----EECTT-----SCEEEETTHHHHHH
T ss_pred HHHHHHH-cCCCEEEEechHHHHHHHh------------CCCCCCEEEECcc----EEecC-----CCEEecccHHHHHH
Confidence 5999999 9999999974433344444 34 777766632 22111 03444444556667
Q ss_pred HHHHhCCceEEEecch
Q 041323 103 VAKSAGTTNVTFITGG 118 (433)
Q Consensus 103 vA~~lgiP~v~~~~~~ 118 (433)
+|+.+|||+++..+..
T Consensus 80 ~Ak~~~vPf~V~a~~~ 95 (191)
T 1w2w_B 80 ICKQFGIKFFVVAPKT 95 (191)
T ss_dssp HHHHHTCEEEEECCGG
T ss_pred HHHHcCCCEEEecccc
Confidence 8899999999986664
No 83
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=50.84 E-value=1e+02 Score=25.23 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=25.5
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCC
Q 041323 258 VLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPP 295 (433)
Q Consensus 258 vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~ 295 (433)
.|-|-+||.+ +....++....|+..|.++-..+-+.
T Consensus 4 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa 39 (159)
T 3rg8_A 4 LVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA 39 (159)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc
Confidence 4666777776 45667778888888888776665543
No 84
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=50.61 E-value=1.1e+02 Score=25.58 Aligned_cols=137 Identities=17% Similarity=0.192 Sum_probs=71.2
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhh-cCCCeEEecccChHHhh
Q 041323 258 VLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEE-TKQGLLVRNWAPQLEIL 336 (433)
Q Consensus 258 vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~pq~~il 336 (433)
.|-|-+||.. +....++....|+..|.++-..+-+.+ ..|+.+.+-.+. ..++
T Consensus 23 ~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH-----------R~p~~l~~~~~~a~~~g------------- 76 (182)
T 1u11_A 23 VVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSAH-----------RTPDRLADYARTAAERG------------- 76 (182)
T ss_dssp SEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT-----------TCHHHHHHHHHHTTTTT-------------
T ss_pred EEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEccc-----------CCHHHHHHHHHHHHhCC-------------
Confidence 4777788876 567778888888898888766665442 355554332210 0111
Q ss_pred ccCCcceEEecCCc----hhHHHHHhcCCceEecccccchh--hHHH-HHHH--HhcceEEE-ccCCCCcccHHHHHHHH
Q 041323 337 SHKSTGAFLSYCGW----NSALESLSQGLPMIGWPIAAEQT--YNSK-MLVE--EMGMAVEL-TRGVQSTIVGHDVKNVI 406 (433)
Q Consensus 337 ~~~~v~~~ithgG~----~s~~eal~~GvP~i~~P~~~dQ~--~na~-~~~~--~~G~g~~l-~~~~~~~~~~~~l~~ai 406 (433)
.+ .||.=.|. .++.-++ .-+|+|.+|...... ..+- -+.. . |+.+.. .-++.+-.++.-++..|
T Consensus 77 --~~--ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqI 150 (182)
T 1u11_A 77 --LN--VIIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASI 150 (182)
T ss_dssp --CC--EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHH
T ss_pred --Cc--EEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHH
Confidence 12 35555553 2344333 578999999854321 1211 1222 2 444322 11000123444555444
Q ss_pred HHHhcCCchhHHHHHHHHHHHHHHH
Q 041323 407 EMVMDEAGKGQEMKAKAEKIGRQIR 431 (433)
Q Consensus 407 ~~vl~~~~~~~~~~~~a~~l~~~~~ 431 (433)
. -+.|+ .++++.+..++..+
T Consensus 151 l-a~~d~----~l~~kL~~~r~~~~ 170 (182)
T 1u11_A 151 L-ALYNP----ALAARLETWRALQT 170 (182)
T ss_dssp H-GGGCH----HHHHHHHHHHHHHH
T ss_pred H-ccCCH----HHHHHHHHHHHHHH
Confidence 3 23565 67777777766654
No 85
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=50.60 E-value=1.2e+02 Score=26.09 Aligned_cols=44 Identities=9% Similarity=-0.082 Sum_probs=29.5
Q ss_pred eEEecccChHH-h-hccCCcceEEecCCchhHHHHH---------hcCCceEeccc
Q 041323 324 LLVRNWAPQLE-I-LSHKSTGAFLSYCGWNSALESL---------SQGLPMIGWPI 368 (433)
Q Consensus 324 v~~~~~~pq~~-i-l~~~~v~~~ithgG~~s~~eal---------~~GvP~i~~P~ 368 (433)
+.+...++... + ...++. .++--||.||+-|.. .+++|++++-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 44445555332 3 344553 778889999988876 47999998863
No 86
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=50.60 E-value=24 Score=32.59 Aligned_cols=95 Identities=8% Similarity=0.005 Sum_probs=57.7
Q ss_pred CCcEEEEEeCC-CC---CCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhc-C----CCe-
Q 041323 255 PGSVLYISFGS-QN---TISSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEET-K----QGL- 324 (433)
Q Consensus 255 ~~~vv~vs~GS-~~---~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~v- 324 (433)
++++|.+.-|| .. ..+.+.+.++++.|.+.+.++++. +... + ....+.+... + .++
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~-g~~~------e-------~~~~~~i~~~~~~~~~~~~~ 244 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLF-GSAK------D-------HEAGNEILAALNTEQQAWCR 244 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEEC-CCGG------G-------HHHHHHHHTTSCHHHHTTEE
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEE-eChh------h-------HHHHHHHHHhhhhccccceE
Confidence 45688888888 32 356788999999988778887764 4321 1 1111111100 0 122
Q ss_pred EEecccC---hHHhhccCCcceEEecCCchhHHHHHhcCCceEec
Q 041323 325 LVRNWAP---QLEILSHKSTGAFLSYCGWNSALESLSQGLPMIGW 366 (433)
Q Consensus 325 ~~~~~~p---q~~il~~~~v~~~ithgG~~s~~eal~~GvP~i~~ 366 (433)
.+.+..+ -.+++++++ ++|+.- .|+++-|.+.|+|+|++
T Consensus 245 ~l~g~~sl~e~~ali~~a~--l~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 245 NLAGETQLDQAVILIAACK--AIVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp ECTTTSCHHHHHHHHHTSS--EEEEES-SHHHHHHHHTTCCEEEE
T ss_pred eccCcCCHHHHHHHHHhCC--EEEecC-CHHHHHHHHcCCCEEEE
Confidence 2223322 246888998 599873 45566688999999976
No 87
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=50.44 E-value=58 Score=31.55 Aligned_cols=32 Identities=25% Similarity=0.425 Sum_probs=26.5
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeC
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (433)
..||+|+-.+..|= .+|+.|++ +||+|+..-.
T Consensus 9 ~k~v~viG~G~sG~-----s~A~~l~~-~G~~V~~~D~ 40 (451)
T 3lk7_A 9 NKKVLVLGLARSGE-----AAARLLAK-LGAIVTVNDG 40 (451)
T ss_dssp TCEEEEECCTTTHH-----HHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEEeeCHHHH-----HHHHHHHh-CCCEEEEEeC
Confidence 45899999877663 56999999 9999999865
No 88
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=50.08 E-value=19 Score=31.18 Aligned_cols=45 Identities=13% Similarity=0.096 Sum_probs=38.3
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhh
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYL 49 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~ 49 (433)
.+.+|++.+.+...|-....-++..|.. .|++|......-..+.+
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~-~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGA-NGFQIVDLGVDVLNENV 135 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHH-TSCEEEECCSSCCHHHH
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHH-CCCeEEEcCCCCCHHHH
Confidence 3579999999999999999999999999 99999998765444443
No 89
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=49.35 E-value=6.7 Score=35.97 Aligned_cols=36 Identities=11% Similarity=0.160 Sum_probs=27.8
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcC-----C-cEEEEEeC
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRST-----G-FKITIANT 42 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~r-----G-h~Vt~~~~ 42 (433)
|++.+|+|.|+-.|..|. .+|..|++ . | |+|+++..
T Consensus 4 m~~~~m~I~iiG~G~mG~-----~~a~~L~~-~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGG-----YYGAMLAL-RAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHH-----HHHHHHHH-HHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHHH-----HHHHHHHh-CccccCCCCCEEEEEc
Confidence 777778999998877774 56888988 8 9 99999864
No 90
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=49.27 E-value=10 Score=37.59 Aligned_cols=37 Identities=14% Similarity=0.232 Sum_probs=30.6
Q ss_pred CCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCc
Q 041323 3 SENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLN 45 (433)
Q Consensus 3 ~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~ 45 (433)
+.|+||+++-.+..| +.+|+.|++ .|++||++...++
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~-~~~~VtLId~~~~ 76 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDT-KKYNVSIISPRSY 76 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCT-TTCEEEEEESSSE
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhh-CCCcEEEECCCCC
Confidence 357899999887666 578999999 9999999986544
No 91
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=49.09 E-value=92 Score=30.86 Aligned_cols=33 Identities=18% Similarity=0.131 Sum_probs=28.2
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCC
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (433)
.||.|+-.+..| |=.+|+.|++ +|++|+..-..
T Consensus 20 ~~i~~iGiGg~G----ms~lA~~l~~-~G~~V~~sD~~ 52 (524)
T 3hn7_A 20 MHIHILGICGTF----MGSLALLARA-LGHTVTGSDAN 52 (524)
T ss_dssp CEEEEETTTSHH----HHHHHHHHHH-TTCEEEEEESC
T ss_pred CEEEEEEecHhh----HHHHHHHHHh-CCCEEEEECCC
Confidence 589999999888 5679999999 99999997653
No 92
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=47.83 E-value=73 Score=27.63 Aligned_cols=101 Identities=9% Similarity=0.101 Sum_probs=54.4
Q ss_pred cEEEEeCC-CCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhhhccCCCCCCCCCCceeEEEcCCCCCCCCCCCCC
Q 041323 6 EHTVMLPL-MAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISCANPNSPEKFNVNLVELPFCSLDHDLPPNT 84 (433)
Q Consensus 6 ~~il~~~~-~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~l~~~~ 84 (433)
..|-+++. +..|-..=++.++..+.. +|.+|.++.+....+.-+....+ ..|++...++.... .++....
T Consensus 28 G~I~vitG~M~sGKTT~Llr~~~r~~~-~g~kvli~kp~~D~R~~~~~I~S-------r~G~~~~a~~v~~~-~di~~~i 98 (219)
T 3e2i_A 28 GWIECITGSMFSGKSEELIRRLRRGIY-AKQKVVVFKPAIDDRYHKEKVVS-------HNGNAIEAINISKA-SEIMTHD 98 (219)
T ss_dssp CEEEEEEECTTSCHHHHHHHHHHHHHH-TTCCEEEEEEC-----------C-------BTTBCCEEEEESSG-GGGGGSC
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHHHH-cCCceEEEEeccCCcchhhhHHH-------hcCCceeeEEeCCH-HHHHHHH
Confidence 46667775 488999999999999999 99999888765433222211110 03444333332211 1121111
Q ss_pred CCCccEEEEcC--Ccc-----cHHHHHHHhCCceEEEec
Q 041323 85 ENRELVFGSST--FFG-----WAVDVAKSAGTTNVTFIT 116 (433)
Q Consensus 85 ~~~~~~vv~d~--~~~-----~a~~vA~~lgiP~v~~~~ 116 (433)
....++|+.|- |+. ....+| .+|+|++.+..
T Consensus 99 ~~~~dvV~IDEaQFf~~~~v~~l~~la-~~gi~Vi~~GL 136 (219)
T 3e2i_A 99 LTNVDVIGIDEVQFFDDEIVSIVEKLS-ADGHRVIVAGL 136 (219)
T ss_dssp CTTCSEEEECCGGGSCTHHHHHHHHHH-HTTCEEEEEEE
T ss_pred hcCCCEEEEechhcCCHHHHHHHHHHH-HCCCEEEEeec
Confidence 22334898883 232 223344 58999888643
No 93
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=47.63 E-value=26 Score=30.69 Aligned_cols=40 Identities=13% Similarity=0.102 Sum_probs=35.9
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCC
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (433)
.+++|++..-|+.|-.+=++.+|..|++ +|++|.++....
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~-~G~~V~v~d~D~ 44 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLR-QGVRVMAGVVET 44 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHH-TTCCEEEEECCC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHH-CCCCEEEEEeCC
Confidence 3678999999999999999999999999 999998887654
No 94
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=47.37 E-value=15 Score=32.40 Aligned_cols=36 Identities=11% Similarity=0.160 Sum_probs=30.7
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeC
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (433)
|.+.+|+|.|+-.|..|- .||+.|++ +||+|+.+..
T Consensus 2 ~~~~~mkI~IIG~G~~G~-----sLA~~L~~-~G~~V~~~~~ 37 (232)
T 3dfu_A 2 MQAPRLRVGIFDDGSSTV-----NMAEKLDS-VGHYVTVLHA 37 (232)
T ss_dssp -CCCCCEEEEECCSCCCS-----CHHHHHHH-TTCEEEECSS
T ss_pred CCCCCcEEEEEeeCHHHH-----HHHHHHHH-CCCEEEEecC
Confidence 677889999999998886 68999999 9999998754
No 95
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=46.93 E-value=16 Score=29.42 Aligned_cols=33 Identities=15% Similarity=0.269 Sum_probs=26.1
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCC
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (433)
+.||+++-. |++- ..+|+.|.+ +||+|+++...
T Consensus 3 ~~~vlI~G~---G~vG--~~la~~L~~-~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGH---SILA--INTILQLNQ-RGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECC---SHHH--HHHHHHHHH-TTCCEEEEECC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHH-CCCCEEEEECC
Confidence 458888854 5544 689999999 99999999863
No 96
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=46.75 E-value=1.2e+02 Score=25.08 Aligned_cols=36 Identities=11% Similarity=-0.007 Sum_probs=26.3
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCC
Q 041323 258 VLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPP 295 (433)
Q Consensus 258 vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~ 295 (433)
.|-|-+||.+ +....++....|+..|.++-..+-+.
T Consensus 9 ~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa 44 (174)
T 3lp6_A 9 RVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA 44 (174)
T ss_dssp SEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred eEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC
Confidence 4677778876 56677888888888888876666544
No 97
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=46.63 E-value=35 Score=33.54 Aligned_cols=87 Identities=13% Similarity=0.024 Sum_probs=53.8
Q ss_pred eE-EecccChHH---hhccCCcceEEe---cCCc-hhHHHHHhcCC-----ceEecccccchhhHHHHHHHHhcceEEEc
Q 041323 324 LL-VRNWAPQLE---ILSHKSTGAFLS---YCGW-NSALESLSQGL-----PMIGWPIAAEQTYNSKMLVEEMGMAVELT 390 (433)
Q Consensus 324 v~-~~~~~pq~~---il~~~~v~~~it---hgG~-~s~~eal~~Gv-----P~i~~P~~~dQ~~na~~~~~~~G~g~~l~ 390 (433)
++ +.+++++.+ ++..+++ ||. +=|+ .++.||+++|+ |+|+--..+--.. + ..|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~----l----~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE----L----TSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT----C----TTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH----h----CCeEEEC
Confidence 44 457888765 5667776 443 3355 48899999998 6665443321111 1 2466776
Q ss_pred cCCCCcccHHHHHHHHHHHhcCC-chhHHHHHHHHH
Q 041323 391 RGVQSTIVGHDVKNVIEMVMDEA-GKGQEMKAKAEK 425 (433)
Q Consensus 391 ~~~~~~~~~~~l~~ai~~vl~~~-~~~~~~~~~a~~ 425 (433)
. .+.++++++|.++|+++ ++++.+.+++++
T Consensus 403 p-----~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~ 433 (482)
T 1uqt_A 403 P-----YDRDEVAAALDRALTMSLAERISRHAEMLD 433 (482)
T ss_dssp T-----TCHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred C-----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4 46899999999999864 234444444443
No 98
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=46.22 E-value=20 Score=30.89 Aligned_cols=44 Identities=5% Similarity=-0.103 Sum_probs=32.2
Q ss_pred CCCCCcEEEEeCCCCcccHHH-HHHHHHHHHhcCCcEEEEEeCCCch
Q 041323 1 MGSENEHTVMLPLMAHGHLIP-FLALAKQIHRSTGFKITIANTPLNI 46 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P-~l~LA~~L~~~rGh~Vt~~~~~~~~ 46 (433)
|.-.+.||++--.|+ +..+- .+.|.+.|.+ +|++|.++.++.-.
T Consensus 1 m~l~~k~IllgiTGs-iaayk~~~~ll~~L~~-~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 1 MSLKGKRIGFGFTGS-HCTYEEVMPHLEKLIA-EGAEVRPVVSYTVQ 45 (207)
T ss_dssp -CCTTCEEEEEECSC-GGGGTTSHHHHHHHHH-TTCEEEEEECC---
T ss_pred CCCCCCEEEEEEECh-HHHHHHHHHHHHHHHh-CCCEEEEEEehHHH
Confidence 443345888877776 56665 8999999999 99999999887665
No 99
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=46.02 E-value=1e+02 Score=30.31 Aligned_cols=31 Identities=16% Similarity=0.330 Sum_probs=26.0
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEe
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~ 41 (433)
.||.|+-.+..|= =.+|+.|++ +|++|+..-
T Consensus 23 ~~v~viGiG~sG~----s~~A~~l~~-~G~~V~~~D 53 (494)
T 4hv4_A 23 RHIHFVGIGGAGM----GGIAEVLAN-EGYQISGSD 53 (494)
T ss_dssp CEEEEETTTSTTH----HHHHHHHHH-TTCEEEEEC
T ss_pred CEEEEEEEcHhhH----HHHHHHHHh-CCCeEEEEE
Confidence 5899999988872 247999999 999999874
No 100
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=45.57 E-value=23 Score=30.04 Aligned_cols=43 Identities=12% Similarity=0.097 Sum_probs=36.3
Q ss_pred EEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhh
Q 041323 7 HTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (433)
Q Consensus 7 ~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (433)
||++.-.|+.|-+ =...|.++|.+ +|++|.++.++.-.+.+..
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~-~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEE-LDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHH-TTCEEEEEECHHHHHHHHH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHH-CCCEEEEEEChhHHHHhhH
Confidence 8888888888855 47999999999 9999999998776666665
No 101
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=45.24 E-value=16 Score=28.34 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=24.4
Q ss_pred CCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeC
Q 041323 3 SENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (433)
Q Consensus 3 ~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (433)
++.|+|+++-. |.+- ..+|+.|.+ .||+|+++..
T Consensus 2 ~~~m~i~IiG~---G~iG--~~~a~~L~~-~g~~v~~~d~ 35 (140)
T 1lss_A 2 SHGMYIIIAGI---GRVG--YTLAKSLSE-KGHDIVLIDI 35 (140)
T ss_dssp ---CEEEEECC---SHHH--HHHHHHHHH-TTCEEEEEES
T ss_pred CCCCEEEEECC---CHHH--HHHHHHHHh-CCCeEEEEEC
Confidence 34689998843 5553 367899999 9999999864
No 102
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=45.06 E-value=1.4e+02 Score=25.00 Aligned_cols=38 Identities=11% Similarity=-0.011 Sum_probs=29.1
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCC
Q 041323 256 GSVLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPP 295 (433)
Q Consensus 256 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~ 295 (433)
+|.|-|-+||.. +....++..+.|++.|..+-..+-+.
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA 59 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA 59 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc
Confidence 346888899987 45678888899999998876666554
No 103
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=45.04 E-value=22 Score=32.05 Aligned_cols=32 Identities=16% Similarity=0.260 Sum_probs=24.0
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeC
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (433)
|||++. |+.|.|- -.|+++|.+ +||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~-~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNA-RGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHH-TTCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHH-CCCEEEEEEC
Confidence 566654 4556554 468899999 9999999873
No 104
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=44.62 E-value=1.2e+02 Score=24.85 Aligned_cols=139 Identities=16% Similarity=0.169 Sum_probs=70.3
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhc
Q 041323 258 VLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILS 337 (433)
Q Consensus 258 vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~ 337 (433)
.|-|-+||.+ +....++....|+..|.++-..+-+.+ ..|+.+.+-.+ . ..
T Consensus 5 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~SaH-----------R~p~~~~~~~~-------------~---a~ 55 (163)
T 3ors_A 5 KVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSAH-----------RTPKMMVQFAS-------------E---AR 55 (163)
T ss_dssp CEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT-----------TSHHHHHHHHH-------------H---TT
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECCc-----------CCHHHHHHHHH-------------H---HH
Confidence 3667778876 566778888888888888766655442 35555433221 0 01
Q ss_pred cCCcceEEecCCc----hhHHHHHhcCCceEecccccchh--hHHH-HHHHH-hcceEEEc-cCCCCcccHHHHHHHHHH
Q 041323 338 HKSTGAFLSYCGW----NSALESLSQGLPMIGWPIAAEQT--YNSK-MLVEE-MGMAVELT-RGVQSTIVGHDVKNVIEM 408 (433)
Q Consensus 338 ~~~v~~~ithgG~----~s~~eal~~GvP~i~~P~~~dQ~--~na~-~~~~~-~G~g~~l~-~~~~~~~~~~~l~~ai~~ 408 (433)
...++.||.=.|. .++.-++ .-+|+|.+|...... ..+- -+... -|+.+..- -++.+-.++.-++..|..
T Consensus 56 ~~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~ 134 (163)
T 3ors_A 56 ERGINIIIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLS 134 (163)
T ss_dssp TTTCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHH
T ss_pred hCCCcEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCCcccHHHHHHHHHHHh
Confidence 1112236665553 2343333 678999999754322 1111 11110 13322221 100012344445544433
Q ss_pred HhcCCchhHHHHHHHHHHHHHHH
Q 041323 409 VMDEAGKGQEMKAKAEKIGRQIR 431 (433)
Q Consensus 409 vl~~~~~~~~~~~~a~~l~~~~~ 431 (433)
+ .|+ .++++.+..++.++
T Consensus 135 ~-~d~----~l~~kl~~~r~~~~ 152 (163)
T 3ors_A 135 I-QNP----SLVEKLNQYESSLI 152 (163)
T ss_dssp T-TCT----HHHHHHHHHHHHHH
T ss_pred C-CCH----HHHHHHHHHHHHHH
Confidence 3 566 57777777766654
No 105
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A*
Probab=43.61 E-value=35 Score=32.36 Aligned_cols=26 Identities=4% Similarity=-0.340 Sum_probs=18.4
Q ss_pred cCCcccHHHHHHHhCCceEEEecchH
Q 041323 94 STFFGWAVDVAKSAGTTNVTFITGGA 119 (433)
Q Consensus 94 d~~~~~a~~vA~~lgiP~v~~~~~~~ 119 (433)
-.-+.....+|+.+|||+++..+..-
T Consensus 272 KiGTy~lAl~Ak~~~vPfyV~ap~~k 297 (374)
T 2yvk_A 272 KIGTYGLAILANAFDIPFFVAAPLST 297 (374)
T ss_dssp ETTHHHHHHHHHHTTCCEEEECCGGG
T ss_pred cccHHHHHHHHHHcCCCEEEecccce
Confidence 33344556678999999999876643
No 106
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=43.57 E-value=42 Score=31.14 Aligned_cols=73 Identities=5% Similarity=-0.029 Sum_probs=52.1
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCC
Q 041323 270 SSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCG 349 (433)
Q Consensus 270 ~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG 349 (433)
+.+...++.+++.+..++.||.++++. .-.++.++++...+-.+|. .||=+.-
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-------------------------g~~rlL~~LD~~~i~~~PK--~~~GySD 115 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGF-------------------------NSNQLLPYLDYDLISENPK--ILCGFSD 115 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS-------------------------CGGGGGGGCCHHHHHHSCC--EEEECTT
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCch-------------------------hHHHHhhhcchhhhccCCe--EEEeccc
Confidence 346688899999999999999987652 0111346777777777777 4888888
Q ss_pred chhHHHHHh--cCCceEecccc
Q 041323 350 WNSALESLS--QGLPMIGWPIA 369 (433)
Q Consensus 350 ~~s~~eal~--~GvP~i~~P~~ 369 (433)
..+++-+++ .|+..+.-|..
T Consensus 116 iT~L~~al~~~~g~~t~hGp~~ 137 (327)
T 4h1h_A 116 ITALATAIYTQTELITYSGAHF 137 (327)
T ss_dssp HHHHHHHHHHHHCBCEEECCCT
T ss_pred ccHHHHHHHHhcCeEEEeCcch
Confidence 777777774 46666666653
No 107
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=42.93 E-value=32 Score=29.72 Aligned_cols=44 Identities=9% Similarity=0.141 Sum_probs=36.9
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhh
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (433)
+.||++.-.++.+-+. .+.|.+.|.+ +| +|.++.++.-.+.+..
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~-~g-~V~vv~T~~A~~fv~~ 62 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTE-WA-EVRAVVTKSSLHFLDK 62 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHT-TS-EEEEEECTGGGGTCCG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhc-CC-CEEEEEcchHHHhcCH
Confidence 4589999999988766 8999999999 99 9999998877655554
No 108
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=41.95 E-value=38 Score=31.78 Aligned_cols=22 Identities=9% Similarity=-0.251 Sum_probs=16.7
Q ss_pred cccHHHHHHHhCCceEEEecch
Q 041323 97 FGWAVDVAKSAGTTNVTFITGG 118 (433)
Q Consensus 97 ~~~a~~vA~~lgiP~v~~~~~~ 118 (433)
+.....+|+.+|||+++..++.
T Consensus 250 T~~lAl~Ak~~~vPfyV~ap~~ 271 (347)
T 1t9k_A 250 TYSLAVLAKRNNIPFYVAAPVS 271 (347)
T ss_dssp HHHHHHHHHHTTCCEEEECCGG
T ss_pred HHHHHHHHHHcCCCEEEecccc
Confidence 4455567899999999987664
No 109
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=41.71 E-value=40 Score=32.04 Aligned_cols=23 Identities=13% Similarity=-0.211 Sum_probs=17.1
Q ss_pred cccHHHHHHHhCCceEEEecchH
Q 041323 97 FGWAVDVAKSAGTTNVTFITGGA 119 (433)
Q Consensus 97 ~~~a~~vA~~lgiP~v~~~~~~~ 119 (433)
+.....+|+.+|||+++..+..-
T Consensus 279 Ty~lAl~Ak~~~vPfyV~ap~~k 301 (383)
T 2a0u_A 279 TYNLAVSAKFHGVKLYVAAPTTT 301 (383)
T ss_dssp HHHHHHHHHHTTCCEEEECCGGG
T ss_pred HHHHHHHHHHcCCCEEEeCCcce
Confidence 44555678999999999876653
No 110
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=41.07 E-value=36 Score=31.72 Aligned_cols=73 Identities=11% Similarity=0.090 Sum_probs=56.3
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCC
Q 041323 270 SSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCG 349 (433)
Q Consensus 270 ~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG 349 (433)
+.+...++.+++.+..++.||.++++. .-.++.++++...+-++|. .||=+.-
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-------------------------g~~rlL~~lD~~~i~~~PK--~~~GySD 116 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGM-------------------------NSNSLLPYIDYDAFQNNPK--IMIGYSD 116 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS-------------------------CGGGGGGGSCHHHHHHSCC--EEEECGG
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc-------------------------cHHHHhhhcChhHHhhCCe--EEEEech
Confidence 356688899999999999999988652 0111346777777777887 5999999
Q ss_pred chhHHHHHh--cCCceEecccc
Q 041323 350 WNSALESLS--QGLPMIGWPIA 369 (433)
Q Consensus 350 ~~s~~eal~--~GvP~i~~P~~ 369 (433)
...++-+++ .|+..+--|..
T Consensus 117 iTaL~~al~~~~G~~t~hGp~~ 138 (336)
T 3sr3_A 117 ATALLLGIYAKTGIPTFYGPAL 138 (336)
T ss_dssp GHHHHHHHHHHHCCCEEECCCH
T ss_pred HHHHHHHHHHhcCceEEECChh
Confidence 999999887 59999888864
No 111
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=40.30 E-value=52 Score=28.71 Aligned_cols=28 Identities=18% Similarity=0.115 Sum_probs=23.4
Q ss_pred cceEEecCCchhHHHHHhcCCceEecccc
Q 041323 341 TGAFLSYCGWNSALESLSQGLPMIGWPIA 369 (433)
Q Consensus 341 v~~~ithgG~~s~~eal~~GvP~i~~P~~ 369 (433)
++++|++||-......- .++|+|-++..
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs 91 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPS 91 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCC
Confidence 44699999998888875 58999999975
No 112
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=38.03 E-value=23 Score=33.34 Aligned_cols=30 Identities=27% Similarity=0.381 Sum_probs=26.0
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEE
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIA 40 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~ 40 (433)
.|||+|+--+-.| |.+|..|++ +||+|+++
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~-~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRK-HGIKVTIY 30 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEE
T ss_pred CCEEEEECcCHHH-----HHHHHHHHh-CCCCEEEE
Confidence 3789999777666 789999999 99999998
No 113
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=37.86 E-value=39 Score=27.06 Aligned_cols=34 Identities=12% Similarity=0.214 Sum_probs=25.6
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCC
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (433)
.+++|+++-.+..| ..+|+.|.+ +|++|+++...
T Consensus 18 ~~~~v~IiG~G~iG-----~~la~~L~~-~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGCGRLG-----SLIANLASS-SGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEEESC
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHh-CCCeEEEEECC
Confidence 35689988554444 568999999 99999998743
No 114
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=37.74 E-value=92 Score=23.90 Aligned_cols=36 Identities=14% Similarity=0.086 Sum_probs=23.1
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEE
Q 041323 256 GSVLYISFGSQNTISSSQTMELAIGLEASAKSFLWV 291 (433)
Q Consensus 256 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~ 291 (433)
..+|+|+.||......+.+..+.+.+++....+.+.
T Consensus 6 ~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a 41 (126)
T 3lyh_A 6 HQIILLAHGSSDARWCETFEKLAEPTVESIENAAIA 41 (126)
T ss_dssp EEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEE
Confidence 459999999975323345777777776644444443
No 115
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=37.59 E-value=29 Score=30.54 Aligned_cols=43 Identities=16% Similarity=0.176 Sum_probs=32.7
Q ss_pred CCCCCcEEEEeC--CCCcccHHHHHHHHHHHHhcCCcEEEEEeCCC
Q 041323 1 MGSENEHTVMLP--LMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (433)
Q Consensus 1 m~~~~~~il~~~--~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (433)
|...+++++.+. -++.|-..-...||..|++ +|++|.++-...
T Consensus 1 m~~~~~~vI~v~s~kGGvGKTt~a~~LA~~la~-~g~~VlliD~D~ 45 (257)
T 1wcv_1 1 MLRAKVRRIALANQKGGVGKTTTAINLAAYLAR-LGKRVLLVDLDP 45 (257)
T ss_dssp ----CCCEEEECCSSCCHHHHHHHHHHHHHHHH-TTCCEEEEECCT
T ss_pred CCCCCCEEEEEEeCCCCchHHHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 666677766664 5678999999999999999 999999997554
No 116
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=37.49 E-value=61 Score=29.82 Aligned_cols=73 Identities=14% Similarity=0.209 Sum_probs=55.3
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhc-cCCcceEEecC
Q 041323 270 SSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILS-HKSTGAFLSYC 348 (433)
Q Consensus 270 ~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~-~~~v~~~ithg 348 (433)
+.+...++.+++.+..++.||.++++. + -.++.++++...+-. +|. .||=+.
T Consensus 65 d~~Ra~dL~~a~~Dp~i~aI~~~rGGy------g-------------------a~rlLp~LD~~~i~~a~PK--~~iGyS 117 (311)
T 1zl0_A 65 VEQRLEDLHNAFDMPDITAVWCLRGGY------G-------------------CGQLLPGLDWGRLQAASPR--PLIGFS 117 (311)
T ss_dssp HHHHHHHHHHHHHSTTEEEEEESCCSS------C-------------------GGGGTTTCCHHHHHHSCCC--CEEECG
T ss_pred HHHHHHHHHHHHhCCCCCEEEEccCCc------C-------------------HHHHhhccchhhhhccCCC--EEEEEc
Confidence 456688899999999999999988752 0 011336676666666 787 499999
Q ss_pred CchhHHHHHh-cCCceEecccc
Q 041323 349 GWNSALESLS-QGLPMIGWPIA 369 (433)
Q Consensus 349 G~~s~~eal~-~GvP~i~~P~~ 369 (433)
-...++-+++ .|++.+--|..
T Consensus 118 DiTaL~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 118 DISVLLSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp GGHHHHHHHHHTTCCEEECCCG
T ss_pred hhHHHHHHHHHcCCcEEECHhh
Confidence 9999999886 48888887764
No 117
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=37.46 E-value=1.5e+02 Score=24.36 Aligned_cols=140 Identities=14% Similarity=0.156 Sum_probs=71.9
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhh
Q 041323 257 SVLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEIL 336 (433)
Q Consensus 257 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il 336 (433)
|.|-|-+||.. +....++....|+..|..+-..+-+.+ ..|+.+.+..+ . +
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaH-----------Rtp~~l~~~~~-------------~---~ 56 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSAH-----------RTPDKMFDYAE-------------T---A 56 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTT-----------TCHHHHHHHHH-------------H---T
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcCc-----------CCHHHHHHHHH-------------H---H
Confidence 34777788876 566778888888899987766665542 35555443222 1 1
Q ss_pred ccCCcceEEecCCch----hHHHHHhcCCceEecccccchh--hHHH-HHHHH-hcceEEEc-cCCCCcccHHHHHHHHH
Q 041323 337 SHKSTGAFLSYCGWN----SALESLSQGLPMIGWPIAAEQT--YNSK-MLVEE-MGMAVELT-RGVQSTIVGHDVKNVIE 407 (433)
Q Consensus 337 ~~~~v~~~ithgG~~----s~~eal~~GvP~i~~P~~~dQ~--~na~-~~~~~-~G~g~~l~-~~~~~~~~~~~l~~ai~ 407 (433)
....++.||.=.|.- ++.-+ ..-+|+|.+|...... ..+- -+... -|+++..- -+..+-.++.-++..|.
T Consensus 57 ~~~g~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il 135 (166)
T 3oow_A 57 KERGLKVIIAGAGGAAHLPGMVAA-KTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASIL 135 (166)
T ss_dssp TTTTCCEEEEEECSSCCHHHHHHH-TCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHH
T ss_pred HhCCCcEEEEECCcchhhHHHHHh-ccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHH
Confidence 111123477666642 33332 3468999999853221 1111 11110 13343332 10001234444444443
Q ss_pred HHhcCCchhHHHHHHHHHHHHHHH
Q 041323 408 MVMDEAGKGQEMKAKAEKIGRQIR 431 (433)
Q Consensus 408 ~vl~~~~~~~~~~~~a~~l~~~~~ 431 (433)
.+ .|+ .++++.+..++..+
T Consensus 136 ~~-~d~----~l~~kl~~~r~~~~ 154 (166)
T 3oow_A 136 QH-TDI----NIAKALAEFRAEQT 154 (166)
T ss_dssp GG-GCH----HHHHHHHHHHHHHH
T ss_pred cC-CCH----HHHHHHHHHHHHHH
Confidence 32 565 67777777776654
No 118
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=36.83 E-value=39 Score=32.19 Aligned_cols=39 Identities=13% Similarity=0.135 Sum_probs=26.5
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcC--CcEEEEEeCCCc
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRST--GFKITIANTPLN 45 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~r--Gh~Vt~~~~~~~ 45 (433)
|++|++++ ++.....=+-.|.++|.+ + |+++.++.+...
T Consensus 27 ~~kI~~v~-Gtr~~~~~~a~li~~l~~-~~~~~~~~~~~tG~h 67 (403)
T 3ot5_A 27 KIKVMSIF-GTRPEAIKMAPLVLALEK-EPETFESTVVITAQH 67 (403)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHHT-CTTTEEEEEEECC--
T ss_pred cceEEEEE-ecChhHHHHHHHHHHHHh-CCCCCcEEEEEecCc
Confidence 46787776 455555666888999999 8 689876655433
No 119
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=36.59 E-value=75 Score=24.92 Aligned_cols=36 Identities=8% Similarity=-0.020 Sum_probs=28.4
Q ss_pred CcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhh
Q 041323 15 AHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (433)
Q Consensus 15 ~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (433)
.....+..+.+|...++ .||+|+++........+.+
T Consensus 28 ~~~~~~~al~lA~~A~a-~g~eV~vFf~~dGV~~l~k 63 (134)
T 3mc3_A 28 DLDRTYAPLFMASISAS-MEYETSVFFMIXGPXLLDX 63 (134)
T ss_dssp GTHHHHHHHHHHHHHHH-TTCEEEEEECTTGGGGGBH
T ss_pred CHHHHHHHHHHHHHHHH-CCCCEEEEEEeCcHHHHhh
Confidence 46788899999999999 9999998877665544443
No 120
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=36.35 E-value=47 Score=30.78 Aligned_cols=35 Identities=11% Similarity=0.148 Sum_probs=27.0
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcCCc-EEEEEeC
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRSTGF-KITIANT 42 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~rGh-~Vt~~~~ 42 (433)
|||++++. ..++...+..|+++|++ +|+ ++.++.+
T Consensus 1 mkIl~v~~-~~~~~~~~~~l~~~L~~-~g~~~~~v~~~ 36 (384)
T 1vgv_A 1 MKVLTVFG-TRPEAIKMAPLVHALAK-DPFFEAKVCVT 36 (384)
T ss_dssp CEEEEEEC-SHHHHHHHHHHHHHHHH-STTCEEEEEEC
T ss_pred CeEEEEec-ccHHHHHHHHHHHHHHh-CCCCceEEEEc
Confidence 57888764 46777888999999999 994 8776544
No 121
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5
Probab=36.15 E-value=48 Score=31.12 Aligned_cols=24 Identities=13% Similarity=-0.263 Sum_probs=17.5
Q ss_pred CCcccHHHHHHHhCCceEEEecch
Q 041323 95 TFFGWAVDVAKSAGTTNVTFITGG 118 (433)
Q Consensus 95 ~~~~~a~~vA~~lgiP~v~~~~~~ 118 (433)
.-+.....+|+.+|||+++..++.
T Consensus 245 iGT~~lAl~Ak~~~vPfyV~a~~~ 268 (351)
T 1t5o_A 245 IGTYTVSVVAKHHNIPFYVAAPKA 268 (351)
T ss_dssp TTHHHHHHHHHHTTCCEEEECCGG
T ss_pred cCHHHHHHHHHHcCCCEEEeCccc
Confidence 334455567889999999987664
No 122
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=36.14 E-value=27 Score=28.42 Aligned_cols=36 Identities=14% Similarity=0.204 Sum_probs=29.0
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCc
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLN 45 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~ 45 (433)
-++++++.++ | +.|++.+++.|.+ +|.+|+++ ..++
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~-~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQE-IGNDVTTL-HVTF 59 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHH-HTCEEEEE-EECB
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHh-cCCcEEEE-EeCC
Confidence 3677777655 4 8999999999999 99999998 5444
No 123
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=35.25 E-value=19 Score=34.33 Aligned_cols=37 Identities=8% Similarity=0.021 Sum_probs=25.3
Q ss_pred CCcEEEEeCC---CCcccHHHHHHHHHHHHhcCCcEEEEEeCC
Q 041323 4 ENEHTVMLPL---MAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (433)
Q Consensus 4 ~~~~il~~~~---~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (433)
.+|||++++. | .+.-.-...+++.|++ +| +|++++..
T Consensus 13 ~~MkIl~is~~~~p-~~~~~~~~~l~~~l~~-~G-~V~vi~~~ 52 (406)
T 2hy7_A 13 RRPCYLVLSSHDFR-TPRRANIHFITDQLAL-RG-TTRFFSLR 52 (406)
T ss_dssp CCSCEEEEESSCTT-SSSCCHHHHHHHHHHH-HS-CEEEEECS
T ss_pred CCceEEEEecccCC-ChhhhhHhHHHHHHHh-CC-ceEEEEec
Confidence 3689999983 3 2221123457889999 99 99999643
No 124
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=35.04 E-value=38 Score=28.78 Aligned_cols=32 Identities=13% Similarity=0.187 Sum_probs=25.4
Q ss_pred cCCcceEEecCCchhHHHHHhcCCceEeccccc
Q 041323 338 HKSTGAFLSYCGWNSALESLSQGLPMIGWPIAA 370 (433)
Q Consensus 338 ~~~v~~~ithgG~~s~~eal~~GvP~i~~P~~~ 370 (433)
...++++|++||-....... .++|+|-++..+
T Consensus 49 ~~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 49 QDEVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TTTCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred cCCCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 34445799999998888875 689999999854
No 125
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=34.75 E-value=24 Score=32.68 Aligned_cols=43 Identities=21% Similarity=0.199 Sum_probs=31.4
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhh
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (433)
|+ .|+|+++-.|+.|- .+|..|++ .||+|+++......+.+.+
T Consensus 1 M~--~mkI~IiGaG~~G~-----~~a~~L~~-~g~~V~~~~r~~~~~~~~~ 43 (335)
T 3ghy_A 1 MS--LTRICIVGAGAVGG-----YLGARLAL-AGEAINVLARGATLQALQT 43 (335)
T ss_dssp -C--CCCEEEESCCHHHH-----HHHHHHHH-TTCCEEEECCHHHHHHHHH
T ss_pred CC--CCEEEEECcCHHHH-----HHHHHHHH-CCCEEEEEEChHHHHHHHH
Confidence 65 57999998887775 57999999 9999999975333333443
No 126
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=34.65 E-value=33 Score=29.64 Aligned_cols=38 Identities=13% Similarity=-0.087 Sum_probs=33.3
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCC
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (433)
|+|+|..-|+.|=..=...||..|++ +|++|.++-...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~-~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMAS-DYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTT-TCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 46888778889999999999999999 999999987544
No 127
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=34.27 E-value=29 Score=31.22 Aligned_cols=28 Identities=21% Similarity=0.272 Sum_probs=23.7
Q ss_pred cceEEecCCchhHHHHHhc------CCceEeccc
Q 041323 341 TGAFLSYCGWNSALESLSQ------GLPMIGWPI 368 (433)
Q Consensus 341 v~~~ithgG~~s~~eal~~------GvP~i~~P~ 368 (433)
++++|+=||=||+.+++.. ++|++++|.
T Consensus 36 ~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 36 PEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp CSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 3479999999999999764 889999974
No 128
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=33.91 E-value=59 Score=26.66 Aligned_cols=21 Identities=10% Similarity=0.056 Sum_probs=16.8
Q ss_pred cCCchhHHHH---HhcCCceEecc
Q 041323 347 YCGWNSALES---LSQGLPMIGWP 367 (433)
Q Consensus 347 hgG~~s~~ea---l~~GvP~i~~P 367 (433)
..-+||..|. .+.|+|++++-
T Consensus 82 ~~D~GTafEiGyA~AlgKPVi~l~ 105 (161)
T 2f62_A 82 EPDCGTAFEVGCAAALNKMVLTFT 105 (161)
T ss_dssp SCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCcHHHHHHHHHHCCCEEEEEE
Confidence 3457899996 88999999874
No 129
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=33.84 E-value=2e+02 Score=23.78 Aligned_cols=139 Identities=15% Similarity=0.136 Sum_probs=70.3
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhc
Q 041323 258 VLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILS 337 (433)
Q Consensus 258 vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~ 337 (433)
.|-|-+||.+ +....++....|+..|.++-..+-+.+ ..|+.+.+-.+ . ..
T Consensus 14 ~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~SaH-----------R~p~~~~~~~~-------------~---a~ 64 (174)
T 3kuu_A 14 KIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSAH-----------RTPDRLFSFAE-------------Q---AE 64 (174)
T ss_dssp CEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT-----------TCHHHHHHHHH-------------H---TT
T ss_pred cEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEccc-----------CCHHHHHHHHH-------------H---HH
Confidence 3677778876 566778888888898888766665542 35555433221 0 00
Q ss_pred cCCcceEEecCCc-h---hHHHHHhcCCceEecccccchh-hHHHHHHHH-h--cceEEEc-cCCCCcccHHHHHHHHHH
Q 041323 338 HKSTGAFLSYCGW-N---SALESLSQGLPMIGWPIAAEQT-YNSKMLVEE-M--GMAVELT-RGVQSTIVGHDVKNVIEM 408 (433)
Q Consensus 338 ~~~v~~~ithgG~-~---s~~eal~~GvP~i~~P~~~dQ~-~na~~~~~~-~--G~g~~l~-~~~~~~~~~~~l~~ai~~ 408 (433)
...++.||.=.|. + ++.-+ ..-+|+|.+|...... .....+.-. + |+.+..- -++.+-.++.-++..|..
T Consensus 65 ~~g~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa 143 (174)
T 3kuu_A 65 ANGLHVIIAGNGGAAHLPGMLAA-KTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILA 143 (174)
T ss_dssp TTTCSEEEEEEESSCCHHHHHHH-TCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHH
T ss_pred hCCCcEEEEECChhhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHc
Confidence 1112236665553 2 33322 3468999999854222 111122110 1 3322221 100011234444444433
Q ss_pred HhcCCchhHHHHHHHHHHHHHHH
Q 041323 409 VMDEAGKGQEMKAKAEKIGRQIR 431 (433)
Q Consensus 409 vl~~~~~~~~~~~~a~~l~~~~~ 431 (433)
+.|+ .++++.++.++..+
T Consensus 144 -~~d~----~l~~kl~~~r~~~~ 161 (174)
T 3kuu_A 144 -LHDT----ELAGRLAHWRQSQT 161 (174)
T ss_dssp -TTCH----HHHHHHHHHHHHHH
T ss_pred -CCCH----HHHHHHHHHHHHHH
Confidence 3555 67777777776654
No 130
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=33.74 E-value=38 Score=31.58 Aligned_cols=97 Identities=10% Similarity=0.165 Sum_probs=57.4
Q ss_pred CCcEEEEEeCCCC---CCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccC
Q 041323 255 PGSVLYISFGSQN---TISSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAP 331 (433)
Q Consensus 255 ~~~vv~vs~GS~~---~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 331 (433)
++++|.+.-||.. ..+.+.+.++++.|.+.|.++++ +++.. +. .+-+.+.+... ...+.+.+-.+
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl-~g~~~------e~---~~~~~i~~~~~--~~~~~l~g~~s 251 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVF-FGGPM------DL---EMVQPVVEQME--TKPIVATGKFQ 251 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEE-CCCTT------TH---HHHHHHHHTCS--SCCEECTTCCC
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE-EeCcc------hH---HHHHHHHHhcc--cccEEeeCCCC
Confidence 3568888888753 35678899999998877888876 45331 10 01111111111 12233323222
Q ss_pred ---hHHhhccCCcceEEecCCchhHHHHHhcCCceEec
Q 041323 332 ---QLEILSHKSTGAFLSYCGWNSALESLSQGLPMIGW 366 (433)
Q Consensus 332 ---q~~il~~~~v~~~ithgG~~s~~eal~~GvP~i~~ 366 (433)
-.+++++++ ++|+.- .|.++=|.+.|+|+|++
T Consensus 252 l~e~~ali~~a~--~~i~~D-sG~~HlAaa~g~P~v~l 286 (349)
T 3tov_A 252 LGPLAAAMNRCN--LLITND-SGPMHVGISQGVPIVAL 286 (349)
T ss_dssp HHHHHHHHHTCS--EEEEES-SHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHhCC--EEEECC-CCHHHHHHhcCCCEEEE
Confidence 335788888 599872 23344478899999986
No 131
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=33.49 E-value=38 Score=30.95 Aligned_cols=45 Identities=11% Similarity=0.078 Sum_probs=39.7
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcC--CcEEEEEeCCCchhhhhh
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRST--GFKITIANTPLNIQYLQN 51 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~r--Gh~Vt~~~~~~~~~~~~~ 51 (433)
|||+++-...-||+.=..++.+.|++ + +.++++++.+.+.+.++.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~-~~P~a~I~~l~~~~~~~l~~~ 47 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQ-AIPGIKFDWVVEEGFAQIPSW 47 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHH-HSTTCEEEEEEEGGGTHHHHT
T ss_pred CeEEEEeccccchHHhHHHHHHHHHH-hCCCCEEEEEEehhhhHHHhc
Confidence 58999999999999889999999999 6 999999998887766654
No 132
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=33.45 E-value=2.1e+02 Score=23.88 Aligned_cols=38 Identities=18% Similarity=0.048 Sum_probs=27.9
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCC
Q 041323 256 GSVLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPP 295 (433)
Q Consensus 256 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~ 295 (433)
-|.|-|-+||.+ +....++....|+..|.++-..+-+.
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa 50 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA 50 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 356888888887 56677888888888888876666544
No 133
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=33.34 E-value=1.2e+02 Score=27.92 Aligned_cols=34 Identities=12% Similarity=0.253 Sum_probs=24.2
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEc
Q 041323 258 VLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIR 293 (433)
Q Consensus 258 vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~ 293 (433)
++++++|+.+ .......++++|.+.|.++.+.+.
T Consensus 7 il~~~~~~~G--hv~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 7 ILFANVQGHG--HVYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEECCSSHH--HHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEeCCCCc--ccccHHHHHHHHHhCCCEEEEEcC
Confidence 6777776543 234466788888888988888775
No 134
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=33.14 E-value=40 Score=31.70 Aligned_cols=38 Identities=8% Similarity=0.062 Sum_probs=28.6
Q ss_pred cEEEEeC--CCC-cccHHHHHHHHHHHHhcCCcEEEEEeCCCc
Q 041323 6 EHTVMLP--LMA-HGHLIPFLALAKQIHRSTGFKITIANTPLN 45 (433)
Q Consensus 6 ~~il~~~--~~~-~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~ 45 (433)
|||++++ +|. .|--.-...||++|++ + |+|++++....
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~-~-~~V~v~~~~~~ 41 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISK-A-HEVIVFGIHAF 41 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTT-T-SEEEEEEESCC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHh-c-CCeEEEeecCC
Confidence 6788875 333 3555667899999999 9 99999985443
No 135
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=33.10 E-value=26 Score=29.89 Aligned_cols=45 Identities=4% Similarity=-0.116 Sum_probs=35.7
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhh
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (433)
+.||++.-.|+.|=+. ...|.+.|.+ +|++|.++.++.-.+.+..
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~-~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKS-FFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTT-TSSEEEEEECHHHHHHSCH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHH-CCCEEEEEEchhHHHHHHH
Confidence 3488888888877765 7899999999 9999999988766555443
No 136
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=32.99 E-value=59 Score=29.61 Aligned_cols=39 Identities=10% Similarity=0.058 Sum_probs=30.6
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhh
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (433)
|+|+++-.|+.|- .+|..|++ .||+|+++.... .+.+.+
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~-~g~~V~~~~r~~-~~~i~~ 41 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQR-SGEDVHFLLRRD-YEAIAG 41 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHH-TSCCEEEECSTT-HHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHH-CCCeEEEEEcCc-HHHHHh
Confidence 6899998888885 57899999 999999998654 455555
No 137
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=32.81 E-value=41 Score=29.93 Aligned_cols=52 Identities=15% Similarity=0.335 Sum_probs=36.4
Q ss_pred ceEEecCCchhHHHHHhc---CCceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCC
Q 041323 342 GAFLSYCGWNSALESLSQ---GLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEA 413 (433)
Q Consensus 342 ~~~ithgG~~s~~eal~~---GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~ 413 (433)
+++|+=||=||+.+++.. ++|+++++. +. +|. . ..+.++++.+++++++++.
T Consensus 43 D~vv~~GGDGTll~~a~~~~~~~PilGIn~-G~-----------~Gf--l------~~~~~~~~~~al~~i~~g~ 97 (258)
T 1yt5_A 43 DLIVVVGGDGTVLKAAKKAADGTPMVGFKA-GR-----------LGF--L------TSYTLDEIDRFLEDLRNWN 97 (258)
T ss_dssp SEEEEEECHHHHHHHHTTBCTTCEEEEEES-SS-----------CCS--S------CCBCGGGHHHHHHHHHTTC
T ss_pred CEEEEEeCcHHHHHHHHHhCCCCCEEEEEC-CC-----------CCc--c------CcCCHHHHHHHHHHHHcCC
Confidence 479999999999999876 889888862 21 121 1 1235677888888777654
No 138
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=32.76 E-value=28 Score=28.17 Aligned_cols=48 Identities=13% Similarity=0.298 Sum_probs=34.5
Q ss_pred CCcEEEEeCCC--CcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhhh
Q 041323 4 ENEHTVMLPLM--AHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNT 52 (433)
Q Consensus 4 ~~~~il~~~~~--~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~~ 52 (433)
+-|+++++-.. ..-.+--.+-|+..|.. +||+|++++++.....++-+
T Consensus 5 ~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~-~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 5 STGKALMVLGCPESPVQIPLAIYTSHKLKK-KGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp -CCEEEEECCCSCSTTHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHHHHH
T ss_pred cceeeeEEecCCCCcchhhHHHHHHHHHHh-cCCeeEEecCHHHHhheecc
Confidence 34676666422 22445567889999999 99999999988777776653
No 139
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=32.73 E-value=23 Score=33.34 Aligned_cols=37 Identities=24% Similarity=0.238 Sum_probs=29.5
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCC
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (433)
|+..+|+|.|+-.+..|- .+|..|++ .||+|++....
T Consensus 25 m~~~~mkI~VIGaG~mG~-----alA~~La~-~G~~V~l~~r~ 61 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGT-----ALALVLAR-KGQKVRLWSYE 61 (356)
T ss_dssp --CCCSCEEEECCSHHHH-----HHHHHHHT-TTCCEEEECSC
T ss_pred ccccCCeEEEECccHHHH-----HHHHHHHH-CCCeEEEEeCC
Confidence 455568999998888875 68999999 99999998753
No 140
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=32.69 E-value=48 Score=28.83 Aligned_cols=37 Identities=11% Similarity=-0.029 Sum_probs=30.1
Q ss_pred CCCcEEEEeCC--CCcccHHHHHHHHHHHHhcCCcEEEEE
Q 041323 3 SENEHTVMLPL--MAHGHLIPFLALAKQIHRSTGFKITIA 40 (433)
Q Consensus 3 ~~~~~il~~~~--~~~GHv~P~l~LA~~L~~~rGh~Vt~~ 40 (433)
++||+.+|++. ...|-..-.+.|++.|++ +|++|.++
T Consensus 1 ~~~mk~i~Itgt~t~vGKT~vt~~L~~~l~~-~G~~V~~~ 39 (228)
T 3of5_A 1 SNAMKKFFIIGTDTEVGKTYISTKLIEVCEH-QNIKSLCL 39 (228)
T ss_dssp CTTCEEEEEEESSSSSCHHHHHHHHHHHHHH-TTCCEEEE
T ss_pred CCCCcEEEEEeCCCCCCHHHHHHHHHHHHHH-CCCeeEEe
Confidence 35666666663 466999999999999999 99999884
No 141
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=32.44 E-value=36 Score=32.11 Aligned_cols=35 Identities=14% Similarity=0.272 Sum_probs=28.6
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEe
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~ 41 (433)
|+..+.+|+++--+-.| +.+|..|++ +|++|+++-
T Consensus 1 M~~~~~~V~IVGaG~aG-----l~~A~~L~~-~G~~v~v~E 35 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISG-----LTAALMLRD-AGVDVDVYE 35 (397)
T ss_dssp -CCCCSEEEEECCSHHH-----HHHHHHHHH-TTCEEEEEC
T ss_pred CCCCCCcEEEECCCHHH-----HHHHHHHHh-CCCCEEEEe
Confidence 66667799999877655 788999999 999999984
No 142
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=32.31 E-value=53 Score=31.07 Aligned_cols=73 Identities=10% Similarity=0.029 Sum_probs=54.6
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEEecccChHHhhccCCcceEEecCC
Q 041323 270 SSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLVRNWAPQLEILSHKSTGAFLSYCG 349 (433)
Q Consensus 270 ~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~il~~~~v~~~ithgG 349 (433)
+.+...++.+++.+..++.||.++++. .-.++.++++...|-++|. .||=..-
T Consensus 94 d~~Ra~dL~~af~Dp~i~aI~~~rGGy-------------------------ga~rlLp~LD~~~i~~~PK--~fiGySD 146 (371)
T 3tla_A 94 IKERAQEFNELVYNPDITCIMSTIGGD-------------------------NSNSLLPFLDYDAIIANPK--IIIGYSD 146 (371)
T ss_dssp HHHHHHHHHHHHTCTTEEEEEESCCCS-------------------------CGGGGGGGSCHHHHHHSCC--EEEECGG
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc-------------------------cHHHHHhhcChhhHHhCCc--EEEEech
Confidence 356688899999999999999988752 0111346777777777787 5888888
Q ss_pred chhHHHHHh--cCCceEecccc
Q 041323 350 WNSALESLS--QGLPMIGWPIA 369 (433)
Q Consensus 350 ~~s~~eal~--~GvP~i~~P~~ 369 (433)
...+.-|++ .|+..+--|..
T Consensus 147 iTaL~~ai~~k~Gl~T~hGP~~ 168 (371)
T 3tla_A 147 TTALLAGIYAKTGLITFYGPAL 168 (371)
T ss_dssp GHHHHHHHHHHHCBCEEECCCH
T ss_pred HHHHHHHHHHHcCCEEEECccc
Confidence 888888776 58888887753
No 143
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=32.25 E-value=92 Score=28.67 Aligned_cols=25 Identities=8% Similarity=-0.134 Sum_probs=17.3
Q ss_pred EcCCcccHHHHHHHhCCceEEEecc
Q 041323 93 SSTFFGWAVDVAKSAGTTNVTFITG 117 (433)
Q Consensus 93 ~d~~~~~a~~vA~~lgiP~v~~~~~ 117 (433)
.-.-+.....+|+.+|+|+++..+.
T Consensus 208 nkiGT~~iAl~Ak~~~vP~~V~a~~ 232 (315)
T 3ecs_A 208 NKIGTNQMAVCAKAQNKPFYVVAES 232 (315)
T ss_dssp EETTHHHHHHHHHHTTCCEEEECCG
T ss_pred ehhhhHHHHHHHHHhCCCEEEEecc
Confidence 3333444556788999999987665
No 144
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=32.08 E-value=76 Score=29.46 Aligned_cols=29 Identities=17% Similarity=0.146 Sum_probs=20.7
Q ss_pred cCCcceEEec-CCchhHHHHHhcCCceEeccc
Q 041323 338 HKSTGAFLSY-CGWNSALESLSQGLPMIGWPI 368 (433)
Q Consensus 338 ~~~v~~~ith-gG~~s~~eal~~GvP~i~~P~ 368 (433)
.+++ +|++ .+.....-+-..|+|.+.+-.
T Consensus 114 ~PD~--Vv~~~~~~~~~~aa~~~giP~v~~~~ 143 (391)
T 3tsa_A 114 RPSV--LLVDVCALIGRVLGGLLDLPVVLHRW 143 (391)
T ss_dssp CCSE--EEEETTCHHHHHHHHHTTCCEEEECC
T ss_pred CCCE--EEeCcchhHHHHHHHHhCCCEEEEec
Confidence 5774 5555 666677777889999997743
No 145
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=31.82 E-value=38 Score=30.94 Aligned_cols=34 Identities=12% Similarity=0.089 Sum_probs=27.8
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCc
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLN 45 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~ 45 (433)
||+|+++..+ ....+++++++ +||+|.++.+...
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~-~G~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKD-EGFETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHH-TTCCEEEESCGGG
T ss_pred ceEEEEECCh------hHHHHHHHHHh-CCCEEEEEECCCC
Confidence 5789998876 46789999999 9999999876543
No 146
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=31.42 E-value=21 Score=35.02 Aligned_cols=34 Identities=24% Similarity=0.261 Sum_probs=28.4
Q ss_pred CCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeC
Q 041323 3 SENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (433)
Q Consensus 3 ~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (433)
+..|||+++-.+-.|. .||+.|.+ .||+|+++-.
T Consensus 1 ~~~M~iiI~G~G~vG~-----~la~~L~~-~~~~v~vId~ 34 (461)
T 4g65_A 1 SNAMKIIILGAGQVGG-----TLAENLVG-ENNDITIVDK 34 (461)
T ss_dssp -CCEEEEEECCSHHHH-----HHHHHTCS-TTEEEEEEES
T ss_pred CCcCEEEEECCCHHHH-----HHHHHHHH-CCCCEEEEEC
Confidence 3579999998877775 69999999 9999999964
No 147
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=30.20 E-value=32 Score=27.43 Aligned_cols=36 Identities=11% Similarity=0.130 Sum_probs=28.9
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCc
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLN 45 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~ 45 (433)
-++++++-++ =+.|++.+++.|.+ +|.+|+++ ..+.
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~-~~~~v~l~-g~R~ 54 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQE-IGNDVTTL-HVTF 54 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHH-TTCEEEEE-EEEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHh-cCCcEEEE-EeCC
Confidence 3677777655 37999999999999 99999998 5443
No 148
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=30.12 E-value=3.4e+02 Score=25.99 Aligned_cols=38 Identities=5% Similarity=0.005 Sum_probs=28.3
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCC
Q 041323 256 GSVLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPP 295 (433)
Q Consensus 256 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~ 295 (433)
.+.|-|-+||.+ +....++....|+..|.++-.-+-+.
T Consensus 265 ~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~sa 302 (425)
T 2h31_A 265 QCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSA 302 (425)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeec
Confidence 356778888877 56777888888889898876666544
No 149
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=29.98 E-value=55 Score=29.93 Aligned_cols=39 Identities=10% Similarity=0.158 Sum_probs=30.9
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhh
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (433)
|+|+++-.|+.|- .+|..|++ .||+|+++.... .+.+.+
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~-~g~~V~~~~r~~-~~~i~~ 41 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAK-TGHCVSVVSRSD-YETVKA 41 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHH-TTCEEEEECSTT-HHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHh-CCCeEEEEeCCh-HHHHHh
Confidence 6899998888775 57899999 999999998654 355554
No 150
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=29.86 E-value=53 Score=29.12 Aligned_cols=38 Identities=13% Similarity=0.208 Sum_probs=30.3
Q ss_pred CCCCcEEEEeCC--CCcccHHHHHHHHHHHHhcCCcEEEEE
Q 041323 2 GSENEHTVMLPL--MAHGHLIPFLALAKQIHRSTGFKITIA 40 (433)
Q Consensus 2 ~~~~~~il~~~~--~~~GHv~P~l~LA~~L~~~rGh~Vt~~ 40 (433)
+..+|+.+|++. ...|-..-.+.|++.|++ +|++|.++
T Consensus 22 ~~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~-~G~~V~~f 61 (251)
T 3fgn_A 22 FQSHMTILVVTGTGTGVGKTVVCAALASAARQ-AGIDVAVC 61 (251)
T ss_dssp CCSSCEEEEEEESSTTSCHHHHHHHHHHHHHH-TTCCEEEE
T ss_pred cccCCCEEEEEeCCCCCcHHHHHHHHHHHHHH-CCCeEEEE
Confidence 445666666663 355999999999999999 99999986
No 151
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=29.76 E-value=53 Score=30.86 Aligned_cols=38 Identities=11% Similarity=0.082 Sum_probs=29.0
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCC
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (433)
|++.+++|+++-.+ . --..+++++++ .|++|..+....
T Consensus 7 m~~~~~~ili~g~g---~--~~~~~~~a~~~-~G~~v~~~~~~~ 44 (391)
T 1kjq_A 7 LRPAATRVMLLGSG---E--LGKEVAIECQR-LGVEVIAVDRYA 44 (391)
T ss_dssp TSTTCCEEEEESCS---H--HHHHHHHHHHT-TTCEEEEEESST
T ss_pred CCCCCCEEEEECCC---H--HHHHHHHHHHH-cCCEEEEEECCC
Confidence 66667899999553 2 34778999999 999998887543
No 152
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=29.67 E-value=28 Score=27.25 Aligned_cols=32 Identities=16% Similarity=0.307 Sum_probs=24.6
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeC
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (433)
+.||+++-.+..| ..+|+.|.+ +||+|+++..
T Consensus 6 ~~~v~I~G~G~iG-----~~la~~L~~-~g~~V~~id~ 37 (141)
T 3llv_A 6 RYEYIVIGSEAAG-----VGLVRELTA-AGKKVLAVDK 37 (141)
T ss_dssp CCSEEEECCSHHH-----HHHHHHHHH-TTCCEEEEES
T ss_pred CCEEEEECCCHHH-----HHHHHHHHH-CCCeEEEEEC
Confidence 3588888654333 578999999 9999999864
No 153
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=29.18 E-value=1.1e+02 Score=27.03 Aligned_cols=39 Identities=13% Similarity=0.275 Sum_probs=30.0
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHHh--CCCeEEEEEcC
Q 041323 256 GSVLYISFGSQNTISSSQTMELAIGLEA--SAKSFLWVIRP 294 (433)
Q Consensus 256 ~~vv~vs~GS~~~~~~~~~~~~~~al~~--~~~~~l~~~~~ 294 (433)
..+|+|++||......+.+..+.+.+++ .+..+-|.+..
T Consensus 10 ~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~~ 50 (269)
T 2xvy_A 10 TGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTA 50 (269)
T ss_dssp EEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEESC
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehhh
Confidence 4599999999876566678888888876 35788888764
No 154
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=29.08 E-value=1.1e+02 Score=25.95 Aligned_cols=47 Identities=13% Similarity=-0.063 Sum_probs=33.3
Q ss_pred hHHHhhhcCCCCcEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEE
Q 041323 245 KIIEWLDLHHPGSVLYISFGSQNTISSSQTMELAIGLEASAKSFLWV 291 (433)
Q Consensus 245 ~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~ 291 (433)
-+.+|+.+...+.++||..+|......+.+..+.++|++.|..+.+.
T Consensus 17 ~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 17 LFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 34567644444569999988775444566788899999999886553
No 155
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=28.94 E-value=31 Score=27.16 Aligned_cols=33 Identities=12% Similarity=0.284 Sum_probs=27.1
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCC
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (433)
+.||+++-++..|. .+|+.|.+ +||+|+++...
T Consensus 7 ~~~viIiG~G~~G~-----~la~~L~~-~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVGS-----LLGEKLLA-SDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHHH-----HHHHHHHH-TTCCEEEEESC
T ss_pred CCCEEEECcCHHHH-----HHHHHHHH-CCCCEEEEECC
Confidence 46899998766664 78999999 99999999753
No 156
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=28.86 E-value=2.5e+02 Score=23.22 Aligned_cols=112 Identities=14% Similarity=0.136 Sum_probs=65.2
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCC-chhHHHHhhhcCCCeEE---ecccCh
Q 041323 257 SVLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERL-PEGFEERIEETKQGLLV---RNWAPQ 332 (433)
Q Consensus 257 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~---~~~~pq 332 (433)
.+++.-.||.... ...++++.|.+.|+.+-.+..... ...+ ++.+.. +. ..++. ..|+++
T Consensus 7 ~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A---------~~fi~~~~l~~-l~---~~v~~~~~~~~~~h 70 (175)
T 3qjg_A 7 NVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNG---------RKFINGEILKQ-FC---DNYYDEFEDPFLNH 70 (175)
T ss_dssp EEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGG---------GGGSCHHHHHH-HC---SCEECTTTCTTCCH
T ss_pred EEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCH---------HHHhhHHHHHH-hc---CCEEecCCCCcccc
Confidence 3666666776643 245677778777887666654331 1112 222222 11 12221 145667
Q ss_pred HHhhccCCcceEEecCCchhHHH-------------HHhcCCceEeccccc----c---hhhHHHHHHHHhcce
Q 041323 333 LEILSHKSTGAFLSYCGWNSALE-------------SLSQGLPMIGWPIAA----E---QTYNSKMLVEEMGMA 386 (433)
Q Consensus 333 ~~il~~~~v~~~ithgG~~s~~e-------------al~~GvP~i~~P~~~----d---Q~~na~~~~~~~G~g 386 (433)
..+-..++. .+|.=|=+||+.. ++..++|++++|-.. . ...|...+.+ +|+=
T Consensus 71 i~l~~~aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~ 142 (175)
T 3qjg_A 71 VDIANKHDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGVS 142 (175)
T ss_dssp HHHHHTCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTCE
T ss_pred ccccchhCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCCE
Confidence 776666665 7777777776544 367799999999432 2 2457778887 4763
No 157
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=28.85 E-value=40 Score=30.90 Aligned_cols=42 Identities=14% Similarity=0.285 Sum_probs=29.8
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhh
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (433)
.+++|+++-.|+.|- .+|..|++ .||+|+++..+...+.+.+
T Consensus 18 ~~~kI~IiGaGa~G~-----~~a~~L~~-~G~~V~l~~~~~~~~~i~~ 59 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGC-----YYGGMLAR-AGHEVILIARPQHVQAIEA 59 (318)
T ss_dssp --CEEEEESCSHHHH-----HHHHHHHH-TTCEEEEECCHHHHHHHHH
T ss_pred cCCcEEEECcCHHHH-----HHHHHHHH-CCCeEEEEEcHhHHHHHHh
Confidence 357899998888884 67899999 9999999932223344444
No 158
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=28.35 E-value=51 Score=27.68 Aligned_cols=43 Identities=5% Similarity=0.087 Sum_probs=34.0
Q ss_pred EEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhh
Q 041323 7 HTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (433)
Q Consensus 7 ~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (433)
||++.-.|+.|=+ =...|.+.|.+ +|++|.++.++.-.+.+..
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~-~g~~V~vv~T~~A~~fi~~ 46 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQ-HFDEVNILFSPSSKNFINT 46 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTT-TSSCEEEEECGGGGGTSCG
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHH-CCCEEEEEEchhHHHHHHH
Confidence 6777777776655 67899999999 9999999998776655544
No 159
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=28.11 E-value=1.1e+02 Score=25.08 Aligned_cols=49 Identities=14% Similarity=0.158 Sum_probs=36.5
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhh
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (433)
|+.+|+- +++..+..--++|.+-||..-++ .|++|+++.+-.....+.+
T Consensus 2 m~~~kl~-II~~sG~~dka~~a~ilA~~AaA-~G~eV~iFfTf~Gl~~l~K 50 (160)
T 3pnx_A 2 MENKKMN-LLLFSGDYDKALASLIIANAARE-MEIEVTIFCAFWGLLLLRD 50 (160)
T ss_dssp CTTCEEE-EEECCCCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGGGGGBC
T ss_pred CCCCcEE-EEEecCCHHHHHHHHHHHHHHHH-cCCCEEEEEeehhHHHhcc
Confidence 5555543 44455667789999999999999 9999999987655555554
No 160
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=28.00 E-value=72 Score=22.58 Aligned_cols=48 Identities=15% Similarity=0.263 Sum_probs=31.2
Q ss_pred cCCceEecccccchhh-HHH--HHHHHhcceEEEccCCCCcccHHHHHHHHHHHhc
Q 041323 359 QGLPMIGWPIAAEQTY-NSK--MLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMD 411 (433)
Q Consensus 359 ~GvP~i~~P~~~dQ~~-na~--~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~ 411 (433)
+|+|+++.--...|.+ |.. .+.+. |+..-+.+ ..+++++...+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakke-gvsydvlk----stdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLK----STDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEE----CCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhhc----cCCHHHHHHHHHHHHH
Confidence 6778777665555554 332 23443 66655553 4578999999998874
No 161
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=27.77 E-value=82 Score=23.54 Aligned_cols=34 Identities=12% Similarity=-0.000 Sum_probs=26.0
Q ss_pred cccHHHHHHHHHHHHhcC-Cc-EEEEEeCCCchhhhh
Q 041323 16 HGHLIPFLALAKQIHRST-GF-KITIANTPLNIQYLQ 50 (433)
Q Consensus 16 ~GHv~P~l~LA~~L~~~r-Gh-~Vt~~~~~~~~~~~~ 50 (433)
....+..+.+|..+++ . || +|+++........+.
T Consensus 15 ~~~~~~al~~a~~~~~-~~g~~~v~vff~~dgV~~~~ 50 (117)
T 1jx7_A 15 SESLFNSLRLAIALRE-QESNLDLRLFLMSDAVTAGL 50 (117)
T ss_dssp CSHHHHHHHHHHHHHH-HCTTCEEEEEECGGGGGGGB
T ss_pred cHHHHHHHHHHHHHHh-cCCCccEEEEEEchHHHHHh
Confidence 4567788999999999 9 99 999887655544333
No 162
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=27.76 E-value=81 Score=25.13 Aligned_cols=44 Identities=14% Similarity=0.213 Sum_probs=33.4
Q ss_pred EEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhhh
Q 041323 7 HTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (433)
Q Consensus 7 ~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (433)
-.+++..+..-.+++.+.+|...++ .|++|+++.+-.....+.+
T Consensus 10 l~II~~sg~~d~~~~a~~lA~~Aaa-~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 10 LSIIVFSGTIDKLMPVGILTSGAAA-SGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp EEEEECCCSHHHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHTBH
T ss_pred EEEEEEcCCHHHHHHHHHHHHHHHH-cCCcEEEEEehHHHHHHhc
Confidence 3444555668889999999999999 9999999987555444443
No 163
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=27.60 E-value=2.7e+02 Score=23.36 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=23.7
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCC
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (433)
+++|++. |+.|.+- ..|+++|.+ +||+|+.++-.
T Consensus 21 ~~~ilVt--GatG~iG--~~l~~~L~~-~G~~V~~~~R~ 54 (236)
T 3e8x_A 21 GMRVLVV--GANGKVA--RYLLSELKN-KGHEPVAMVRN 54 (236)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHH-TTCEEEEEESS
T ss_pred CCeEEEE--CCCChHH--HHHHHHHHh-CCCeEEEEECC
Confidence 3455554 3445443 478999999 99999998743
No 164
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=27.53 E-value=75 Score=26.99 Aligned_cols=41 Identities=10% Similarity=0.078 Sum_probs=27.7
Q ss_pred CCCCCcEEEEeCCCCcccHHH----HHHHHHHHHhcCCcEEEEEeCC
Q 041323 1 MGSENEHTVMLPLMAHGHLIP----FLALAKQIHRSTGFKITIANTP 43 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P----~l~LA~~L~~~rGh~Vt~~~~~ 43 (433)
|++.++.|+++... .|.-.- +..+++.|.+ +|++|.++..+
T Consensus 1 ~~~~~~~vl~lHG~-g~~~~~~~~~~~~l~~~l~~-~g~~v~~~d~p 45 (243)
T 1ycd_A 1 MTVQIPKLLFLHGF-LQNGKVFSEKSSGIRKLLKK-ANVQCDYIDAP 45 (243)
T ss_dssp --CCCCEEEEECCT-TCCHHHHHHHTHHHHHHHHH-TTCEEEEECCS
T ss_pred CCCcCceEEEeCCC-CccHHHHHHHHHHHHHHHhh-cceEEEEcCCC
Confidence 77777777777633 333332 3478999999 99999988755
No 165
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=27.32 E-value=1.9e+02 Score=25.67 Aligned_cols=48 Identities=13% Similarity=0.030 Sum_probs=28.2
Q ss_pred hhHHHhhhcCCCCcEEEEEeCCCC---CCCHHHHHHHHHHHHhCCCeEEEEEcC
Q 041323 244 EKIIEWLDLHHPGSVLYISFGSQN---TISSSQTMELAIGLEASAKSFLWVIRP 294 (433)
Q Consensus 244 ~~l~~~l~~~~~~~vv~vs~GS~~---~~~~~~~~~~~~al~~~~~~~l~~~~~ 294 (433)
+++..++++.+-..| -+|... ....+.+..+++.+++.+..+++=.+.
T Consensus 107 ~el~~~~~~~g~~gi---~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~ 157 (307)
T 2f6k_A 107 KTVQQALDQDGALGV---TVPTNSRGLYFGSPVLERVYQELDARQAIVALHPNE 157 (307)
T ss_dssp HHHHHHHHTSCCSEE---EEESEETTEETTCGGGHHHHHHHHTTTCEEEEECCC
T ss_pred HHHHHHHhccCCcEE---EEeccCCCCCCCcHhHHHHHHHHHHcCCeEEECCCC
Confidence 466777754332323 333321 233456788888888988887765553
No 166
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=27.31 E-value=2.7e+02 Score=23.22 Aligned_cols=44 Identities=16% Similarity=0.092 Sum_probs=28.9
Q ss_pred EEecccChH-HhhccCCcceEEecCCchhHHHH---H------hcCCceEeccc
Q 041323 325 LVRNWAPQL-EILSHKSTGAFLSYCGWNSALES---L------SQGLPMIGWPI 368 (433)
Q Consensus 325 ~~~~~~pq~-~il~~~~v~~~ithgG~~s~~ea---l------~~GvP~i~~P~ 368 (433)
.+.++++.. .++..-+...++--||.||+-|. + .+++|++.+-.
T Consensus 82 ~~~~~~~~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 82 IEVNGMHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp EEESHHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred ccCCCHHHHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 344555544 34433333478888999998776 4 37899998854
No 167
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=27.04 E-value=67 Score=32.36 Aligned_cols=45 Identities=11% Similarity=0.081 Sum_probs=38.8
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchhhh
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYL 49 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~ 49 (433)
.+.+|++.+.++..|-....-++..|.. .|++|..++..-..+.+
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~-~G~eVi~LG~~vP~e~i 141 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQC-NNYEIVDLGVMVPAEKI 141 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHT-TTCEEEECCSSBCHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHH-CCCEEEECCCCCCHHHH
Confidence 3679999999999999999999999999 99999998765554433
No 168
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=26.87 E-value=63 Score=24.85 Aligned_cols=45 Identities=13% Similarity=0.101 Sum_probs=29.0
Q ss_pred CCCCCcEEEEeCCCCc-ccH-HHHHHHHHHHHhcCC--cEEEEEeCCCchh
Q 041323 1 MGSENEHTVMLPLMAH-GHL-IPFLALAKQIHRSTG--FKITIANTPLNIQ 47 (433)
Q Consensus 1 m~~~~~~il~~~~~~~-GHv-~P~l~LA~~L~~~rG--h~Vt~~~~~~~~~ 47 (433)
||.. ++++|+-.-.. -.. +-.+.+|....+ +| |+|.++..-....
T Consensus 4 ~~~~-~K~~ivi~s~d~~~~~~~al~~A~~a~~-~G~~~eV~i~~~G~~v~ 52 (117)
T 2fb6_A 4 MSAN-DKLTILWTTDNKDTVFNMLAMYALNSKN-RGWWKHINIILWGASVK 52 (117)
T ss_dssp SSTT-SEEEEEECCCCHHHHHHTHHHHHHHHHH-HTSCSEEEEEECSHHHH
T ss_pred cccC-CeEEEEEEcCChHHHHHHHHHHHHHHHH-cCCCCcEEEEEECCeee
Confidence 4433 56666554432 222 347788999999 99 8999998655444
No 169
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=26.15 E-value=84 Score=29.70 Aligned_cols=37 Identities=19% Similarity=0.196 Sum_probs=28.3
Q ss_pred EEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchh
Q 041323 9 VMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQ 47 (433)
Q Consensus 9 l~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~ 47 (433)
+++-.|++-...=+-+|.++|.+ + +++.++.+...+.
T Consensus 12 ~~~v~GtRpe~~k~~p~~~~l~~-~-~~~~~~~tgqh~~ 48 (385)
T 4hwg_A 12 VMTIVGTRPELIKLCCVISEFDK-H-TKHILVHTGQNYA 48 (385)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHH-H-SEEEEEECSCHHH
T ss_pred eeEEEEcCHhHHHHHHHHHHHHh-c-CCEEEEEeCCCCC
Confidence 34456788888888888999999 8 9988777665544
No 170
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=25.94 E-value=2.6e+02 Score=27.02 Aligned_cols=144 Identities=13% Similarity=0.036 Sum_probs=68.6
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccccCCchhHHHHhhhcCCCeEE--ecccChH
Q 041323 256 GSVLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRSERLPEGFEERIEETKQGLLV--RNWAPQL 333 (433)
Q Consensus 256 ~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~pq~ 333 (433)
+.|+.|..|..+ ...++.|.+.|..+.++-... .+.+..... ..++.+ ..|- .
T Consensus 13 ~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~~--------------~~~~~~l~~--~~~i~~~~~~~~--~ 67 (457)
T 1pjq_A 13 RDCLIVGGGDVA-------ERKARLLLEAGARLTVNALTF--------------IPQFTVWAN--EGMLTLVEGPFD--E 67 (457)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESSC--------------CHHHHHHHT--TTSCEEEESSCC--G
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCCC--------------CHHHHHHHh--cCCEEEEECCCC--c
Confidence 447777666543 445566777888877665421 122222111 123322 2232 2
Q ss_pred HhhccCCcceEEecCCchh-----HHHHHhcCCceEec--ccccchhhHHHHHHHH-hcceEEEccCCCCcccHHHHHHH
Q 041323 334 EILSHKSTGAFLSYCGWNS-----ALESLSQGLPMIGW--PIAAEQTYNSKMLVEE-MGMAVELTRGVQSTIVGHDVKNV 405 (433)
Q Consensus 334 ~il~~~~v~~~ithgG~~s-----~~eal~~GvP~i~~--P~~~dQ~~na~~~~~~-~G~g~~l~~~~~~~~~~~~l~~a 405 (433)
.-|..++ ++|.--|--. ..+|-..|+|+-++ |-..+...-|. +.+. +-+|+. .+.....-+..|++.
T Consensus 68 ~~l~~~~--lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa~-~~~~~l~iaIs--T~Gksp~la~~ir~~ 142 (457)
T 1pjq_A 68 TLLDSCW--LAIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPSI-IDRSPLMVAVS--SGGTSPVLARLLREK 142 (457)
T ss_dssp GGGTTCS--EEEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCEE-EEETTEEEEEE--CTTSCHHHHHHHHHH
T ss_pred cccCCcc--EEEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeeeE-EEeCCeEEEEE--CCCCChHHHHHHHHH
Confidence 3345555 5777777654 33455678887332 32222211000 0111 133444 321223336778888
Q ss_pred HHHHhcCCchhHHHHHHHHHHHHHHH
Q 041323 406 IEMVMDEAGKGQEMKAKAEKIGRQIR 431 (433)
Q Consensus 406 i~~vl~~~~~~~~~~~~a~~l~~~~~ 431 (433)
|...+.+. -..+-+.+.++++.++
T Consensus 143 ie~~l~~~--~~~~~~~~~~~R~~~~ 166 (457)
T 1pjq_A 143 LESLLPQH--LGQVARYAGQLRARVK 166 (457)
T ss_dssp HHHHSCTT--HHHHHHHHHHHHHHHH
T ss_pred HHHhcchh--HHHHHHHHHHHHHHHH
Confidence 88888653 1144455555555443
No 171
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=25.79 E-value=4.5e+02 Score=25.25 Aligned_cols=33 Identities=15% Similarity=0.112 Sum_probs=26.8
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeC
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (433)
.|||-++-..+.| |=.||+.|++ +|++|+..-.
T Consensus 12 ~~~~h~i~I~G~G----~sglA~~l~~-~G~~V~g~D~ 44 (469)
T 1j6u_A 12 HMKIHFVGIGGIG----MSAVALHEFS-NGNDVYGSNI 44 (469)
T ss_dssp CCEEEEETTTSHH----HHHHHHHHHH-TTCEEEEECS
T ss_pred cccEEEEEEcccC----HHHHHHHHHh-CCCEEEEEcC
Confidence 4788888888888 3466999999 9999997653
No 172
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=25.59 E-value=69 Score=26.45 Aligned_cols=37 Identities=16% Similarity=0.348 Sum_probs=27.7
Q ss_pred EEEEeCC-C---CcccHHHHHHHHHHHHhcCCcEEEEEeCCCc
Q 041323 7 HTVMLPL-M---AHGHLIPFLALAKQIHRSTGFKITIANTPLN 45 (433)
Q Consensus 7 ~il~~~~-~---~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~ 45 (433)
+|+++|. + ++. -++.-.|++.|.+ +|.+|.|+.+|-.
T Consensus 25 ~ViIvPGYGmAvAqA-Q~~v~el~~~L~~-~G~~V~faIHPVA 65 (180)
T 1pno_A 25 KVIIVPGYGMAVAQA-QHALREMADVLKK-EGVEVSYAIHPVA 65 (180)
T ss_dssp EEEEEECHHHHHHTC-HHHHHHHHHHHHH-TTCEEEEEECTTC
T ss_pred eEEEECChHHHHHHH-HHHHHHHHHHHHH-CCCeEEEEecccc
Confidence 6677662 2 112 3689999999999 9999999987643
No 173
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=25.49 E-value=47 Score=31.86 Aligned_cols=46 Identities=4% Similarity=-0.072 Sum_probs=33.7
Q ss_pred hHHHhhhcCCCCcEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEE
Q 041323 245 KIIEWLDLHHPGSVLYISFGSQNTISSSQTMELAIGLEASAKSFLW 290 (433)
Q Consensus 245 ~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~ 290 (433)
...+|-...+...-|.|.++|+...+....+.+++++.+.|...+.
T Consensus 254 ~Y~~w~~~~~~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~ 299 (410)
T 4dik_A 254 HYVSVAKGDPKKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVV 299 (410)
T ss_dssp HHHHHHHTCCCTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhcccccccceeeEEecccChHHHHHHHHHHHHHhcCCceEE
Confidence 4456765444344577789999876677788899999999987654
No 174
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=25.30 E-value=3e+02 Score=23.54 Aligned_cols=44 Identities=14% Similarity=0.001 Sum_probs=29.5
Q ss_pred EEecccChH-HhhccCCcceEEecCCchhHHHHHh---------cCCceEeccc
Q 041323 325 LVRNWAPQL-EILSHKSTGAFLSYCGWNSALESLS---------QGLPMIGWPI 368 (433)
Q Consensus 325 ~~~~~~pq~-~il~~~~v~~~ithgG~~s~~eal~---------~GvP~i~~P~ 368 (433)
.+..+++.. .++..-+...++--||.||+-|... +++|++++-.
T Consensus 94 ~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 94 RAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 344556644 3444444447888899999988762 4899998764
No 175
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=25.10 E-value=72 Score=28.21 Aligned_cols=34 Identities=24% Similarity=0.315 Sum_probs=24.8
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeC
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (433)
|+ +++|+++ |+ |-+ -..|++.|.+ +||+|+.++-
T Consensus 1 M~--~~~ilVt--Ga-G~i--G~~l~~~L~~-~g~~V~~~~r 34 (286)
T 3gpi_A 1 MS--LSKILIA--GC-GDL--GLELARRLTA-QGHEVTGLRR 34 (286)
T ss_dssp -C--CCCEEEE--CC-SHH--HHHHHHHHHH-TTCCEEEEEC
T ss_pred CC--CCcEEEE--CC-CHH--HHHHHHHHHH-CCCEEEEEeC
Confidence 55 4577777 34 744 3478999999 9999999874
No 176
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=24.93 E-value=71 Score=26.44 Aligned_cols=37 Identities=22% Similarity=0.341 Sum_probs=27.9
Q ss_pred EEEEeCC-C---CcccHHHHHHHHHHHHhcCCcEEEEEeCCCc
Q 041323 7 HTVMLPL-M---AHGHLIPFLALAKQIHRSTGFKITIANTPLN 45 (433)
Q Consensus 7 ~il~~~~-~---~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~ 45 (433)
+|+++|. + ++. -++.-.|++.|.+ +|.+|.|+.+|-.
T Consensus 24 ~ViIvPGYGmAvAqA-Q~~v~el~~~L~~-~G~~V~faIHPVA 64 (184)
T 1d4o_A 24 SIIITPGYGLCAAKA-QYPIADLVKMLSE-QGKKVRFGIHPVA 64 (184)
T ss_dssp EEEEEECHHHHHTTT-HHHHHHHHHHHHH-TTCEEEEEECTTC
T ss_pred eEEEECChHHHHHHH-HHHHHHHHHHHHH-CCCeEEEEecccc
Confidence 5677662 2 222 2689999999999 9999999987643
No 177
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=24.88 E-value=1e+02 Score=28.73 Aligned_cols=25 Identities=8% Similarity=-0.258 Sum_probs=17.9
Q ss_pred CCcccHHHHHHHhCCceEEEecchH
Q 041323 95 TFFGWAVDVAKSAGTTNVTFITGGA 119 (433)
Q Consensus 95 ~~~~~a~~vA~~lgiP~v~~~~~~~ 119 (433)
.-+.....+|+.+|||+++..++.-
T Consensus 230 iGT~~lAl~Ak~~~vPfyV~a~~~k 254 (338)
T 3a11_A 230 IGTALIALTAKEHRVWTMIAAETYK 254 (338)
T ss_dssp TTHHHHHHHHHHTTCEEEEECCGGG
T ss_pred ccHHHHHHHHHHcCCCEEEecccce
Confidence 3344555678899999999876653
No 178
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=24.55 E-value=43 Score=31.51 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=27.3
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEe
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~ 41 (433)
|+..+.+|+++--+..| +.+|..|++ +|++|+++-
T Consensus 2 M~~~~~dVvIVGaG~aG-----l~~A~~L~~-~G~~V~viE 36 (399)
T 2x3n_A 2 MTDNHIDVLINGCGIGG-----AMLAYLLGR-QGHRVVVVE 36 (399)
T ss_dssp ---CEEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEEC
T ss_pred CCCCcCCEEEECcCHHH-----HHHHHHHHh-CCCcEEEEe
Confidence 55556789999887766 788999999 999999984
No 179
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=24.41 E-value=2e+02 Score=24.69 Aligned_cols=56 Identities=18% Similarity=0.137 Sum_probs=33.1
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcC-CcEEEEEeCCCc-h---hhhhhhccCCCCCCCCCCceeEEEcC
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRST-GFKITIANTPLN-I---QYLQNTISCANPNSPEKFNVNLVELP 72 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~r-Gh~Vt~~~~~~~-~---~~~~~~~~~~~~~~~~~~~i~f~~l~ 72 (433)
|+.+++||+++..+.-..+. +|..+..+ . +++|..+.+... . +++++ .||.+..++
T Consensus 1 ~~~~~~riavl~SG~Gsnl~---all~~~~~-~~~~eI~~Vis~~~~a~~~~~A~~------------~gIp~~~~~ 61 (215)
T 3tqr_A 1 MNREPLPIVVLISGNGTNLQ---AIIGAIQK-GLAIEIRAVISNRADAYGLKRAQQ------------ADIPTHIIP 61 (215)
T ss_dssp ---CCEEEEEEESSCCHHHH---HHHHHHHT-TCSEEEEEEEESCTTCHHHHHHHH------------TTCCEEECC
T ss_pred CCCCCcEEEEEEeCCcHHHH---HHHHHHHc-CCCCEEEEEEeCCcchHHHHHHHH------------cCCCEEEeC
Confidence 88889999999887655444 44445544 3 588887665322 1 23444 688887664
No 180
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=24.30 E-value=1e+02 Score=23.85 Aligned_cols=30 Identities=13% Similarity=0.022 Sum_probs=24.1
Q ss_pred ccHHHHHHHHHHHHhcCCcEE-EEEeCCCchh
Q 041323 17 GHLIPFLALAKQIHRSTGFKI-TIANTPLNIQ 47 (433)
Q Consensus 17 GHv~P~l~LA~~L~~~rGh~V-t~~~~~~~~~ 47 (433)
-.....+.+|..+.+ .||+| +++-......
T Consensus 15 ~~~~~al~~a~a~~~-~g~~v~~vff~~dGV~ 45 (130)
T 2hy5_A 15 QASDSAYQFAKAALE-KGHEIFRVFFYHDGVN 45 (130)
T ss_dssp THHHHHHHHHHHHHH-TTCEEEEEEECGGGGG
T ss_pred HHHHHHHHHHHHHHh-cCCeeCEEEEechHHH
Confidence 457788999999999 99999 8887554433
No 181
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=24.18 E-value=57 Score=29.50 Aligned_cols=36 Identities=14% Similarity=0.159 Sum_probs=28.0
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeC
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (433)
|..+..+|.|+-.+..|+ .+|..|++ .||+|+++..
T Consensus 11 ~~~~~~~I~VIG~G~mG~-----~iA~~la~-~G~~V~~~d~ 46 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGA-----GIAQVAAA-TGHTVVLVDQ 46 (302)
T ss_dssp -CCCCCEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECS
T ss_pred ccccCCEEEEECCCHHHH-----HHHHHHHh-CCCeEEEEEC
Confidence 443345899998888787 58999999 9999998864
No 182
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=24.13 E-value=1.9e+02 Score=27.01 Aligned_cols=35 Identities=23% Similarity=0.289 Sum_probs=26.2
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcC
Q 041323 258 VLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRP 294 (433)
Q Consensus 258 vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~ 294 (433)
+++++.||.+ ...-+..++++|++.|.++.+.+..
T Consensus 3 Ili~~~gt~G--hv~p~~~La~~L~~~Gh~V~v~~~~ 37 (404)
T 3h4t_A 3 VLITGCGSRG--DTEPLVALAARLRELGADARMCLPP 37 (404)
T ss_dssp EEEEEESSHH--HHHHHHHHHHHHHHTTCCEEEEECG
T ss_pred EEEEeCCCCc--cHHHHHHHHHHHHHCCCeEEEEeCH
Confidence 6778888764 2334667889999999999888764
No 183
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=24.08 E-value=79 Score=26.69 Aligned_cols=36 Identities=25% Similarity=0.320 Sum_probs=24.3
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeC
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (433)
|+. .++|+++ |+.|.+- ..|++.|.+ +||+|+.++-
T Consensus 1 M~~-m~~ilIt--GatG~iG--~~l~~~L~~-~g~~V~~~~r 36 (227)
T 3dhn_A 1 MEK-VKKIVLI--GASGFVG--SALLNEALN-RGFEVTAVVR 36 (227)
T ss_dssp --C-CCEEEEE--TCCHHHH--HHHHHHHHT-TTCEEEEECS
T ss_pred CCC-CCEEEEE--cCCchHH--HHHHHHHHH-CCCEEEEEEc
Confidence 553 2466655 4556554 578999999 9999999864
No 184
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=24.07 E-value=96 Score=27.13 Aligned_cols=38 Identities=16% Similarity=0.246 Sum_probs=26.9
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeC
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (433)
|+.-+.++++++-++.| -=.++|++|++ +|++|.++.-
T Consensus 24 m~~l~~k~vlITGas~g---IG~~la~~l~~-~G~~V~~~~r 61 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRG---IGAAIARKLGS-LGARVVLTAR 61 (262)
T ss_dssp -CTTTTCEEEESSTTSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred hhccCCCEEEEECCCCh---HHHHHHHHHHH-CCCEEEEEEC
Confidence 44334467788776653 34688999999 9999988763
No 185
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=23.98 E-value=1e+02 Score=25.33 Aligned_cols=35 Identities=20% Similarity=0.299 Sum_probs=25.1
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeC
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (433)
|+. ++|+++ ++.|-+ -..|+++|.+ +||+|+.++-
T Consensus 1 M~~--~~ilVt--GatG~i--G~~l~~~l~~-~g~~V~~~~r 35 (206)
T 1hdo_A 1 MAV--KKIAIF--GATGQT--GLTTLAQAVQ-AGYEVTVLVR 35 (206)
T ss_dssp CCC--CEEEEE--STTSHH--HHHHHHHHHH-TTCEEEEEES
T ss_pred CCC--CEEEEE--cCCcHH--HHHHHHHHHH-CCCeEEEEEe
Confidence 553 566665 455544 3578999999 9999999874
No 186
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=23.64 E-value=1.3e+02 Score=28.07 Aligned_cols=36 Identities=14% Similarity=0.173 Sum_probs=25.9
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcC
Q 041323 257 SVLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRP 294 (433)
Q Consensus 257 ~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~ 294 (433)
.|++++.|+.+. ......++++|.+.|.+|.+.+..
T Consensus 22 rIl~~~~~~~GH--v~p~l~La~~L~~~Gh~V~v~~~~ 57 (415)
T 3rsc_A 22 HLLIVNVASHGL--ILPTLTVVTELVRRGHRVSYVTAG 57 (415)
T ss_dssp EEEEECCSCHHH--HGGGHHHHHHHHHTTCEEEEEECG
T ss_pred EEEEEeCCCccc--cccHHHHHHHHHHCCCEEEEEeCH
Confidence 478888775542 233567889999999999988753
No 187
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=23.51 E-value=52 Score=29.82 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=26.9
Q ss_pred CCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeC
Q 041323 4 ENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (433)
Q Consensus 4 ~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (433)
.+++|.|+-.+..|. .+|+.|++ .||+|++...
T Consensus 6 ~~~~I~iIG~G~mG~-----~~a~~l~~-~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGM-----GAARSCLR-AGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CCCeEEEECCCHHHH-----HHHHHHHH-CCCeEEEEEC
Confidence 467999998777775 68999999 9999998853
No 188
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=23.28 E-value=58 Score=28.56 Aligned_cols=26 Identities=19% Similarity=0.418 Sum_probs=20.7
Q ss_pred cccHHHHHHHHHHHHhcCCcEEEEEeCCC
Q 041323 16 HGHLIPFLALAKQIHRSTGFKITIANTPL 44 (433)
Q Consensus 16 ~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (433)
.|-+- .++|+++++ +|++|+++..+.
T Consensus 28 SG~mG--~aiA~~~~~-~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHLG--KIITETLLS-AGYEVCLITTKR 53 (232)
T ss_dssp CCHHH--HHHHHHHHH-TTCEEEEEECTT
T ss_pred CCHHH--HHHHHHHHH-CCCEEEEEeCCc
Confidence 56543 468999999 999999998653
No 189
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=23.27 E-value=93 Score=30.69 Aligned_cols=39 Identities=10% Similarity=0.023 Sum_probs=30.3
Q ss_pred CCcEEEEeCCCCccc--HHHHHHHHHH--HHhcCCcEEEEEeCC
Q 041323 4 ENEHTVMLPLMAHGH--LIPFLALAKQ--IHRSTGFKITIANTP 43 (433)
Q Consensus 4 ~~~~il~~~~~~~GH--v~P~l~LA~~--L~~~rGh~Vt~~~~~ 43 (433)
.+|||+++.....+| -.-+..|++. |.+ .||+|++++..
T Consensus 204 ~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~-~~~~v~~~~~~ 246 (568)
T 2vsy_A 204 GPLRVGFVSNGFGAHPTGLLTVALFEALQRRQ-PDLQMHLFATS 246 (568)
T ss_dssp SCEEEEEEESCSSSSHHHHHHHHHHHHHHHHC-TTEEEEEEESS
T ss_pred CCeEEEEECcccccChHHHHHHHHHhhccCCc-ccEEEEEEECC
Confidence 468999998665444 4557889999 778 89999999863
No 190
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=23.26 E-value=78 Score=26.73 Aligned_cols=37 Identities=16% Similarity=0.348 Sum_probs=27.6
Q ss_pred EEEEeCC-C---CcccHHHHHHHHHHHHhcCCcEEEEEeCCCc
Q 041323 7 HTVMLPL-M---AHGHLIPFLALAKQIHRSTGFKITIANTPLN 45 (433)
Q Consensus 7 ~il~~~~-~---~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~ 45 (433)
+|+++|. + ++. -++.-+|++.|.+ +|.+|.|+.+|--
T Consensus 48 ~ViIVPGYGmAVAqA-Q~~v~el~~~L~~-~G~~V~faIHPVA 88 (203)
T 2fsv_C 48 KVIIVPGYGMAVAQA-QHALREMADVLKK-EGVEVSYAIHPVA 88 (203)
T ss_dssp EEEEEECHHHHHHTC-HHHHHHHHHHHHH-TTCEEEEEECTTC
T ss_pred cEEEEcCchHhHHHH-HHHHHHHHHHHHH-cCCeEEEEecccc
Confidence 5666662 1 112 3688999999999 9999999987643
No 191
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=23.12 E-value=1.7e+02 Score=22.55 Aligned_cols=49 Identities=10% Similarity=0.094 Sum_probs=32.8
Q ss_pred cCCceEecccccchhhHHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHHhcCC
Q 041323 359 QGLPMIGWPIAAEQTYNSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMVMDEA 413 (433)
Q Consensus 359 ~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~vl~~~ 413 (433)
..+|+|++--..+ ......+.+. |+--.+.+ .++.++|..+|++++...
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~-g~~~~l~k----P~~~~~L~~~i~~~~~~~ 122 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQD-GAYDFIAK----PFAADRLVQSARRAEEKR 122 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHT-TCCEEEES----SCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhc-CCCeEEeC----CCCHHHHHHHHHHHHHHH
Confidence 4788887754433 3344455553 77555553 578999999999998644
No 192
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=23.10 E-value=95 Score=23.30 Aligned_cols=38 Identities=8% Similarity=0.039 Sum_probs=28.6
Q ss_pred CCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEe
Q 041323 3 SENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (433)
Q Consensus 3 ~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~ 41 (433)
++.|+|+++|..+.|+-.=.-.|-+.+.+ +|.++.+-+
T Consensus 2 ~~~mkIlvvC~~G~~TSll~~kl~~~~~~-~gi~~~i~~ 39 (109)
T 2l2q_A 2 PGSMNILLVCGAGMSTSMLVQRIEKYAKS-KNINATIEA 39 (109)
T ss_dssp CCCEEEEEESSSSCSSCHHHHHHHHHHHH-HTCSEEEEE
T ss_pred CCceEEEEECCChHhHHHHHHHHHHHHHH-CCCCeEEEE
Confidence 55689999998888887555567777777 898765543
No 193
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=22.95 E-value=83 Score=28.01 Aligned_cols=42 Identities=14% Similarity=0.209 Sum_probs=33.4
Q ss_pred CCcEEEEeC--CCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCch
Q 041323 4 ENEHTVMLP--LMAHGHLIPFLALAKQIHRSTGFKITIANTPLNI 46 (433)
Q Consensus 4 ~~~~il~~~--~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~ 46 (433)
.++++++++ -|+.|--.-...||..|++ +|.+|.++-.....
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~-~G~rVLLID~D~~~ 123 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQ-AGYKTLIVDGDMRK 123 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHH-TTCCEEEEECCSSS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHh-CCCeEEEEeCCCCC
Confidence 345666655 4688999999999999999 99999999765443
No 194
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=22.91 E-value=1.1e+02 Score=25.08 Aligned_cols=31 Identities=23% Similarity=0.200 Sum_probs=23.5
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhC-CCeE
Q 041323 258 VLYISFGSQNTISSSQTMELAIGLEAS-AKSF 288 (433)
Q Consensus 258 vv~vs~GS~~~~~~~~~~~~~~al~~~-~~~~ 288 (433)
+.|+++||....+.+.+...++.|.+. +..+
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~~~~v 33 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIPESHI 33 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTTEEE
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCCCCcE
Confidence 579999999765667788888888875 4443
No 195
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=22.68 E-value=81 Score=26.72 Aligned_cols=37 Identities=22% Similarity=0.340 Sum_probs=27.6
Q ss_pred EEEEeCC-C---CcccHHHHHHHHHHHHhcCCcEEEEEeCCCc
Q 041323 7 HTVMLPL-M---AHGHLIPFLALAKQIHRSTGFKITIANTPLN 45 (433)
Q Consensus 7 ~il~~~~-~---~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~ 45 (433)
+|+++|. + ++. -++.-+|++.|.+ +|.+|.|+.+|--
T Consensus 47 ~ViIVPGYGmAVAqA-Q~~v~el~~~L~~-~G~~V~faIHPVA 87 (207)
T 1djl_A 47 SIIITPGYGLCAAKA-QYPIADLVKMLTE-QGKKVRFGIHPVA 87 (207)
T ss_dssp EEEEEECHHHHHHTC-HHHHHHHHHHHHH-TTCEEEEEECTTC
T ss_pred eEEEECCchHHHHHH-hHHHHHHHHHHHH-CCCeEEEEeCccC
Confidence 5666662 1 112 3788999999999 9999999987643
No 196
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=22.12 E-value=3.5e+02 Score=22.62 Aligned_cols=42 Identities=10% Similarity=-0.038 Sum_probs=27.4
Q ss_pred EEecccChHH--hhccCCcceEEecCCchhHHHHH---------hcCCceEecc
Q 041323 325 LVRNWAPQLE--ILSHKSTGAFLSYCGWNSALESL---------SQGLPMIGWP 367 (433)
Q Consensus 325 ~~~~~~pq~~--il~~~~v~~~ithgG~~s~~eal---------~~GvP~i~~P 367 (433)
++.++..... ++.+++. .++-=||.||+-|.. .+++|++++-
T Consensus 93 i~~~~~~~Rk~~m~~~sda-~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln 145 (189)
T 3sbx_A 93 VVTETMWERKQVMEDRANA-FITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLD 145 (189)
T ss_dssp EEESSHHHHHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred EEcCCHHHHHHHHHHHCCE-EEEeCCCcchHHHHHHHHHHHHhcccCCCEEEec
Confidence 3345554432 3445553 677788899998874 2589999874
No 197
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=22.01 E-value=1.1e+02 Score=24.90 Aligned_cols=32 Identities=25% Similarity=0.235 Sum_probs=24.7
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhC-CCeEE
Q 041323 258 VLYISFGSQNTISSSQTMELAIGLEAS-AKSFL 289 (433)
Q Consensus 258 vv~vs~GS~~~~~~~~~~~~~~al~~~-~~~~l 289 (433)
.+|+++||....+...++..+++|.+. +.+++
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~~~~~ 34 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIPESHIL 34 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTTEEEE
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCCCCcee
Confidence 489999999866677788888989875 34443
No 198
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=21.95 E-value=1.5e+02 Score=24.27 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=25.0
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhC-CCeE
Q 041323 258 VLYISFGSQNTISSSQTMELAIGLEAS-AKSF 288 (433)
Q Consensus 258 vv~vs~GS~~~~~~~~~~~~~~al~~~-~~~~ 288 (433)
.+|+++||....+...+...+++|.+. +.++
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~~~~ 34 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLPRSRL 34 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCTTEEE
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCCCCce
Confidence 489999999877888899999999885 3443
No 199
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=21.88 E-value=68 Score=28.85 Aligned_cols=134 Identities=9% Similarity=-0.041 Sum_probs=66.2
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEEcCCCCCCCCccccc-cCCchhHHHHhhhcCCCeEEecccChHHhh-ccCCcceEEec
Q 041323 270 SSSQTMELAIGLEASAKSFLWVIRPPVGFDLRGEFRS-ERLPEGFEERIEETKQGLLVRNWAPQLEIL-SHKSTGAFLSY 347 (433)
Q Consensus 270 ~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~pq~~il-~~~~v~~~ith 347 (433)
....+..+++.+++.+..++.=++... +... -..|. .-..++ .+|+++.++.|
T Consensus 136 ~d~~~~~~~~~a~e~glpv~iH~~~~~------~~~~~~~~p~-------------------~~~~v~~~~P~l~ivl~H 190 (291)
T 3irs_A 136 DDRRLYPLYAFCEDNGIPVIMMTGGNA------GPDITYTNPE-------------------HIDRVLGDFPDLTVVSSH 190 (291)
T ss_dssp TCGGGHHHHHHHHHTTCCEEEECSSSC------SSSGGGGCHH-------------------HHHHHHHHCTTCCEEEEG
T ss_pred CCHHHHHHHHHHHHcCCeEEEeCCCCC------CCCCccCCHH-------------------HHHHHHHHCCCCEEEeec
Confidence 445677888888888888877665421 0000 00000 012233 46888889999
Q ss_pred CCchhHHHHHhc--CCceEecccc---cchhh--HHHHHHHHhcceEEEccCCCCcccHHHHHHHHHHH-hcCCchhHHH
Q 041323 348 CGWNSALESLSQ--GLPMIGWPIA---AEQTY--NSKMLVEEMGMAVELTRGVQSTIVGHDVKNVIEMV-MDEAGKGQEM 419 (433)
Q Consensus 348 gG~~s~~eal~~--GvP~i~~P~~---~dQ~~--na~~~~~~~G~g~~l~~~~~~~~~~~~l~~ai~~v-l~~~~~~~~~ 419 (433)
||+....+++.. ..|-+-+-.. ...+. .-..+.+..|.-..+....-...+.....+.+.++ +++++..+.+
T Consensus 191 ~G~~~~~~~~~l~~~~~nvy~~~Sg~~~~~~~~~~~~~~~~~~g~drllfgSD~P~~~~~~~~~~~~~l~l~~e~~~~i~ 270 (291)
T 3irs_A 191 GNWPWVQEIIHVAFRRPNLYLSPDMYLYNLPGHADFIQAANSFLADRMLFGTAYPMCPLKEYTEWFLTLPIKPDAMEKIL 270 (291)
T ss_dssp GGTTCHHHHHHHHHHCTTEEEECGGGGSSSTTHHHHHHHHTTGGGGTBCCCCCBTSSCHHHHHHHHHTSSCCHHHHHHHH
T ss_pred CCcccHHHHHHHHhHCCCeEecHHHHhccCCCHHHHHHHHHHhCcceEEEecCCCCCCHHHHHHHHHHCCCCHHHHHHHH
Confidence 998877777653 2232322211 11111 11122222355444432111223444555555544 3333345567
Q ss_pred HHHHHHHHH
Q 041323 420 KAKAEKIGR 428 (433)
Q Consensus 420 ~~~a~~l~~ 428 (433)
.+||+++=.
T Consensus 271 ~~NA~rl~~ 279 (291)
T 3irs_A 271 HGNAERLLA 279 (291)
T ss_dssp THHHHHHHH
T ss_pred HHHHHHHhC
Confidence 788887743
No 200
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=21.80 E-value=79 Score=28.40 Aligned_cols=47 Identities=4% Similarity=0.056 Sum_probs=33.5
Q ss_pred CCCcEEEEeCCCCcc----cHHHHHHHHHHHHhcCCcEEEEEeCCCchhhhh
Q 041323 3 SENEHTVMLPLMAHG----HLIPFLALAKQIHRSTGFKITIANTPLNIQYLQ 50 (433)
Q Consensus 3 ~~~~~il~~~~~~~G----Hv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~~~ 50 (433)
+.+|+|+++..+-.. -+.--..++++|.+ +||+|..+........+.
T Consensus 1 ~~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~-~g~~v~~i~~~~~~~~~~ 51 (307)
T 3r5x_A 1 SNAMRIGVIMGGVSSEKQVSIMTGNEMIANLDK-NKYEIVPITLNEKMDLIE 51 (307)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHHHHHHSCT-TTEEEEEEECSSGGGHHH
T ss_pred CCCcEEEEEeCCCCcchHhHHHHHHHHHHHHHH-CCCEEEEEcccCchhHHH
Confidence 357899999865432 24556789999999 999999998754433333
No 201
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=21.72 E-value=79 Score=28.32 Aligned_cols=34 Identities=18% Similarity=0.256 Sum_probs=25.7
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEe
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~ 41 (433)
|+ .+++|.|+-.+..|. .+|+.|.+ .||+|+++.
T Consensus 1 M~-~~~~i~iiG~G~~G~-----~~a~~l~~-~g~~V~~~~ 34 (301)
T 3cky_A 1 ME-KSIKIGFIGLGAMGK-----PMAINLLK-EGVTVYAFD 34 (301)
T ss_dssp ----CCEEEEECCCTTHH-----HHHHHHHH-TTCEEEEEC
T ss_pred CC-CCCEEEEECccHHHH-----HHHHHHHH-CCCeEEEEe
Confidence 55 357999998877775 46889999 999998764
No 202
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=21.54 E-value=84 Score=29.51 Aligned_cols=39 Identities=10% Similarity=0.072 Sum_probs=29.2
Q ss_pred CCCCCcEEEEeCCCCcc-c---HHHHHHHHHHH-HhcCCcEEEEEeC
Q 041323 1 MGSENEHTVMLPLMAHG-H---LIPFLALAKQI-HRSTGFKITIANT 42 (433)
Q Consensus 1 m~~~~~~il~~~~~~~G-H---v~P~l~LA~~L-~~~rGh~Vt~~~~ 42 (433)
|+ |++|+++..+-.+ | +.-...++++| .+ +||+|+.+..
T Consensus 1 m~--k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~-~g~~v~~i~~ 44 (377)
T 1ehi_A 1 MT--KKRVALIFGGNSSEHDVSKRSAQNFYNAIEAT-GKYEIIVFAI 44 (377)
T ss_dssp ----CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHH-SSEEEEEEEE
T ss_pred CC--CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcc-cCcEEEEEEE
Confidence 65 7899999766444 3 44578899999 99 9999999864
No 203
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=21.41 E-value=1.1e+02 Score=25.46 Aligned_cols=35 Identities=11% Similarity=0.159 Sum_probs=28.6
Q ss_pred EEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeC
Q 041323 7 HTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (433)
Q Consensus 7 ~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (433)
.++++.++..|+-.-+..+++.|++ +|+.|.....
T Consensus 33 p~vv~~HG~~g~~~~~~~~~~~l~~-~G~~v~~~d~ 67 (241)
T 3f67_A 33 PIVIVVQEIFGVHEHIRDLCRRLAQ-EGYLAIAPEL 67 (241)
T ss_dssp EEEEEECCTTCSCHHHHHHHHHHHH-TTCEEEEECT
T ss_pred CEEEEEcCcCccCHHHHHHHHHHHH-CCcEEEEecc
Confidence 4666666777887889999999999 9999887754
No 204
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=20.86 E-value=59 Score=29.24 Aligned_cols=32 Identities=19% Similarity=0.253 Sum_probs=25.8
Q ss_pred CcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeC
Q 041323 5 NEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (433)
Q Consensus 5 ~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (433)
+|+|+|+-.|..|. .+|..|++ .||+|+++..
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~-~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-----RLGIMLHQ-GGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHh-CCCcEEEEEC
Confidence 46899997766665 67899999 9999999864
No 205
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=20.66 E-value=60 Score=30.12 Aligned_cols=36 Identities=19% Similarity=0.316 Sum_probs=28.4
Q ss_pred CCCCCcEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeC
Q 041323 1 MGSENEHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (433)
Q Consensus 1 m~~~~~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (433)
|.+.+.+|+++--+..| +.+|.+|++ +|++|+++--
T Consensus 1 Mm~~~~dVvIIGgGi~G-----l~~A~~La~-~G~~V~lle~ 36 (382)
T 1y56_B 1 MLPEKSEIVVIGGGIVG-----VTIAHELAK-RGEEVTVIEK 36 (382)
T ss_dssp -CCSBCSEEEECCSHHH-----HHHHHHHHH-TTCCEEEECS
T ss_pred CCCCcCCEEEECCCHHH-----HHHHHHHHH-CCCeEEEEeC
Confidence 33345689999887777 789999999 9999999853
No 206
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=20.50 E-value=3.6e+02 Score=22.17 Aligned_cols=36 Identities=19% Similarity=0.103 Sum_probs=26.0
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcCC
Q 041323 258 VLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRPP 295 (433)
Q Consensus 258 vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~ 295 (433)
.|-|-+||.+ +....++....|+..|.++-..+-+.
T Consensus 8 ~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa 43 (169)
T 3trh_A 8 FVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA 43 (169)
T ss_dssp EEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred cEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc
Confidence 4677778776 45667788888888888876666544
No 207
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=20.45 E-value=1.1e+02 Score=25.24 Aligned_cols=35 Identities=23% Similarity=0.503 Sum_probs=29.3
Q ss_pred EEEe-CCCCcccHHHHHHHHHHHHhcCCcEEEEEeCC
Q 041323 8 TVML-PLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (433)
Q Consensus 8 il~~-~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (433)
|.|. +-++.|--.-...||..|++ +|++|.++-..
T Consensus 4 i~v~s~kgG~GKTt~a~~la~~la~-~g~~vlliD~D 39 (206)
T 4dzz_A 4 ISFLNPKGGSGKTTAVINIATALSR-SGYNIAVVDTD 39 (206)
T ss_dssp EEECCSSTTSSHHHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHH-CCCeEEEEECC
Confidence 4444 36788999999999999999 99999999754
No 208
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=20.29 E-value=5.9e+02 Score=24.55 Aligned_cols=32 Identities=16% Similarity=0.337 Sum_probs=26.3
Q ss_pred cEEEEeCCCCcccHHHHHHHHHHHHhcCCcEEEEEeC
Q 041323 6 EHTVMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (433)
Q Consensus 6 ~~il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (433)
.||.|+-.+..| |-.+|+.|++ +|++|+..-.
T Consensus 20 ~~v~viGiG~sG----~s~~A~~l~~-~G~~V~~~D~ 51 (491)
T 2f00_A 20 RHIHFVGIGGAG----MGGIAEVLAN-EGYQISGSDL 51 (491)
T ss_dssp CEEEEETTTSTT----HHHHHHHHHH-TTCEEEEECS
T ss_pred CEEEEEEcCHHH----HHHHHHHHHh-CCCeEEEECC
Confidence 489999999877 3348999999 9999998653
No 209
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=20.13 E-value=1e+02 Score=27.76 Aligned_cols=43 Identities=14% Similarity=0.188 Sum_probs=33.5
Q ss_pred CCcEEEEeC--CCCcccHHHHHHHHHHHHhcCCcEEEEEeCCCchh
Q 041323 4 ENEHTVMLP--LMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQ 47 (433)
Q Consensus 4 ~~~~il~~~--~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~ 47 (433)
.+.++++++ -|+.|--.-...||..|++ .|.+|.++-......
T Consensus 90 ~~~kvI~vts~kgG~GKTtva~nLA~~lA~-~G~rVLLID~D~~~~ 134 (286)
T 3la6_A 90 AQNNVLMMTGVSPSIGMTFVCANLAAVISQ-TNKRVLLIDCDMRKG 134 (286)
T ss_dssp TTCCEEEEEESSSSSSHHHHHHHHHHHHHT-TTCCEEEEECCTTTC
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHh-CCCCEEEEeccCCCC
Confidence 345565554 5678999999999999999 999999997654433
No 210
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=20.13 E-value=4.8e+02 Score=23.44 Aligned_cols=43 Identities=9% Similarity=-0.015 Sum_probs=25.2
Q ss_pred hhHHHhhhcCCCCcEEEEEeCCCCCCCHHHHHHHHHHHHhCCCeEEEEEcC
Q 041323 244 EKIIEWLDLHHPGSVLYISFGSQNTISSSQTMELAIGLEASAKSFLWVIRP 294 (433)
Q Consensus 244 ~~l~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~ 294 (433)
.+-.+++.+.- +++-| ||....+.+ +++++.+.+.+++.+.|.
T Consensus 101 ~~~v~~l~~~v--d~lqI--gA~~~~n~~----LLr~va~~gkPVilK~G~ 143 (285)
T 3sz8_A 101 AEQAAPVAEIA--DVLQV--PAFLARQTD----LVVAIAKAGKPVNVKKPQ 143 (285)
T ss_dssp GGGHHHHHTTC--SEEEE--CGGGTTCHH----HHHHHHHTSSCEEEECCT
T ss_pred HHHHHHHHHhC--CEEEE--CccccCCHH----HHHHHHccCCcEEEeCCC
Confidence 34455665542 24444 444333333 556666789999999885
No 211
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=20.11 E-value=77 Score=26.24 Aligned_cols=36 Identities=14% Similarity=0.411 Sum_probs=27.8
Q ss_pred EEEEeC-CC---CcccHHHHHHHHHHHHhcCCcEEEEEeCCC
Q 041323 7 HTVMLP-LM---AHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (433)
Q Consensus 7 ~il~~~-~~---~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (433)
+|+++| ++ ++. -++.-.|++.|.+ +|.+|.|+..|-
T Consensus 32 ~ViIVPGYGmAVAqA-Q~~v~el~~~L~~-~G~~V~faIHPV 71 (186)
T 2bru_C 32 SVIITPGYGMAVAQA-QYPVAEITEKLRA-RGINVRFGIHPV 71 (186)
T ss_dssp EEEEECSBHHHHTTT-HHHHHHHHHHHHH-HCCEEEEEECSS
T ss_pred eEEEECChHHHHHHH-HHHHHHHHHHHHH-CCCeEEEEeccc
Confidence 677776 22 222 2689999999999 999999998754
Done!