Your job contains 1 sequence.
>041325
MGLLLPFPMPCRRNKEPKFQPSSNHLQSELSNASLSSQPSLPSVPSLAPSSSFRKQAPAA
SEHQCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHAN
VVATGNGDAVKSLVVLGDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLP
TLNDRFTKCFLANNYVQVRRHKKCTWVHHVDTVSALALSSDGSLLYSTSWDRTFKIWRTS
DFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTL
EKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTK
AILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAVVDSD
YSNRNSDHSSTSFLVYSGSLDCEIKIWQIR
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041325
(450 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2032452 - symbol:AT1G24130 "AT1G24130" species... 1031 4.1e-104 1
TAIR|locus:2170061 - symbol:AT5G50120 "AT5G50120" species... 872 2.9e-87 1
TAIR|locus:2024031 - symbol:AT1G24530 "AT1G24530" species... 640 1.1e-62 1
TAIR|locus:2074825 - symbol:AT3G50390 "AT3G50390" species... 370 1.4e-46 2
TAIR|locus:2066276 - symbol:AT2G26490 "AT2G26490" species... 424 8.6e-45 2
TAIR|locus:2083710 - symbol:AT3G51930 "AT3G51930" species... 457 2.8e-43 1
TAIR|locus:2085929 - symbol:AT3G18950 "AT3G18950" species... 401 2.4e-37 1
TAIR|locus:2010157 - symbol:AT1G49450 "AT1G49450" species... 400 3.0e-37 1
TAIR|locus:2015423 - symbol:AT1G47610 "AT1G47610" species... 371 1.2e-35 2
TAIR|locus:2116194 - symbol:AT4G34380 "AT4G34380" species... 378 6.5e-35 1
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 196 1.9e-12 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 167 6.7e-12 2
ZFIN|ZDB-GENE-041114-104 - symbol:tbl3 "transducin (beta)... 147 4.6e-11 2
SGD|S000002675 - symbol:CIA1 "Component of cytosolic iron... 158 6.8e-11 2
RGD|1309121 - symbol:Fbxw11 "F-box and WD repeat domain c... 161 8.5e-11 2
UNIPROTKB|F1M373 - symbol:Fbxw11 "Protein Fbxw11" species... 161 1.1e-10 2
MGI|MGI:2144023 - symbol:Fbxw11 "F-box and WD-40 domain p... 161 1.2e-10 2
SGD|S000000680 - symbol:TUP1 "General repressor of transc... 166 1.2e-10 2
UNIPROTKB|J9P544 - symbol:FBXW11 "Uncharacterized protein... 158 2.1e-10 2
UNIPROTKB|B4DH70 - symbol:FBXW11 "cDNA FLJ54601, highly s... 158 2.1e-10 2
UNIPROTKB|E2RTE4 - symbol:FBXW11 "Uncharacterized protein... 158 2.4e-10 2
UNIPROTKB|F1MLG0 - symbol:FBXW11 "Uncharacterized protein... 158 2.4e-10 2
UNIPROTKB|F1PBF1 - symbol:FBXW11 "Uncharacterized protein... 158 2.6e-10 2
UNIPROTKB|Q9UKB1 - symbol:FBXW11 "F-box/WD repeat-contain... 158 2.6e-10 2
UNIPROTKB|F1P5E8 - symbol:FBXW11 "Uncharacterized protein... 156 3.9e-10 3
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 171 1.0e-09 1
ASPGD|ASPL0000002074 - symbol:rcoA species:162425 "Emeric... 170 1.3e-09 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 144 1.9e-09 3
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 144 1.9e-09 3
WB|WBGene00003009 - symbol:lin-23 species:6239 "Caenorhab... 159 1.9e-09 2
UNIPROTKB|Q09990 - symbol:lin-23 "F-box/WD repeat-contain... 159 1.9e-09 2
UNIPROTKB|F1S8U2 - symbol:BTRC "Uncharacterized protein" ... 149 2.7e-09 2
UNIPROTKB|F1MVN1 - symbol:BTRC "Uncharacterized protein" ... 149 3.9e-09 2
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 130 4.0e-09 2
RGD|1359721 - symbol:Btrc "beta-transducin repeat contain... 147 4.5e-09 2
UNIPROTKB|E2RDC4 - symbol:BTRC "Uncharacterized protein" ... 149 4.7e-09 2
ZFIN|ZDB-GENE-030131-6305 - symbol:fbxw11a "F-box and WD-... 146 5.3e-09 2
DICTYBASE|DDB_G0286735 - symbol:DDB_G0286735 "C3HC4-type ... 130 5.9e-09 2
MGI|MGI:1338871 - symbol:Btrc "beta-transducin repeat con... 147 7.7e-09 2
UNIPROTKB|F1LMH8 - symbol:Btrc "Protein Btrc" species:101... 147 7.7e-09 2
UNIPROTKB|Q68DS0 - symbol:DKFZp781N011 "Putative uncharac... 146 8.2e-09 2
UNIPROTKB|I3L9L4 - symbol:STRN3 "Uncharacterized protein"... 155 9.9e-09 1
UNIPROTKB|Q9Y297 - symbol:BTRC "F-box/WD repeat-containin... 146 1.0e-08 2
ZFIN|ZDB-GENE-030131-6622 - symbol:wdr48 "WD repeat domai... 163 1.0e-08 1
ZFIN|ZDB-GENE-040426-2903 - symbol:fbxw11b "F-box and WD-... 143 1.1e-08 2
FB|FBgn0023423 - symbol:slmb "supernumerary limbs" specie... 149 1.2e-08 2
UNIPROTKB|Q5F3K4 - symbol:WDR48 "WD repeat-containing pro... 162 1.3e-08 1
UNIPROTKB|F1NYG1 - symbol:BTRC "Uncharacterized protein" ... 144 1.7e-08 2
DICTYBASE|DDB_G0279507 - symbol:plrg1 "putative RNA splic... 159 1.8e-08 1
UNIPROTKB|Q4R2Z6 - symbol:WDR48 "WD repeat-containing pro... 160 1.9e-08 1
MGI|MGI:1914811 - symbol:Wdr48 "WD repeat domain 48" spec... 160 2.2e-08 1
RGD|1309702 - symbol:Wdr48 "WD repeat domain 48" species:... 160 2.2e-08 1
UNIPROTKB|F1MV75 - symbol:WDR48 "WD repeat-containing pro... 160 2.2e-08 1
UNIPROTKB|Q32PG3 - symbol:WDR48 "WD repeat-containing pro... 160 2.2e-08 1
UNIPROTKB|E2RJ50 - symbol:WDR48 "Uncharacterized protein"... 160 2.2e-08 1
UNIPROTKB|Q8TAF3 - symbol:WDR48 "WD repeat-containing pro... 160 2.2e-08 1
UNIPROTKB|F2Z5V5 - symbol:WDR48 "Uncharacterized protein"... 160 2.2e-08 1
UNIPROTKB|Q5RAW8 - symbol:WDR48 "WD repeat-containing pro... 160 2.2e-08 1
ZFIN|ZDB-GENE-061110-55 - symbol:zgc:153492 "zgc:153492" ... 158 2.4e-08 1
UNIPROTKB|E1BFB3 - symbol:STRN "Uncharacterized protein" ... 158 2.6e-08 2
TAIR|locus:4515102561 - symbol:AT1G21651 species:3702 "Ar... 149 2.7e-08 2
FB|FBgn0044323 - symbol:Cka "Connector of kinase to AP-1"... 157 2.8e-08 2
ASPGD|ASPL0000073843 - symbol:AN4460 species:162425 "Emer... 143 2.9e-08 2
UNIPROTKB|F1NM37 - symbol:TBL3 "Uncharacterized protein" ... 151 3.9e-08 3
RGD|3782 - symbol:Strn "striatin, calmodulin binding prot... 156 4.3e-08 2
RGD|621827 - symbol:Strn3 "striatin, calmodulin binding p... 156 4.6e-08 2
MGI|MGI:2151064 - symbol:Strn3 "striatin, calmodulin bind... 156 4.6e-08 2
UNIPROTKB|Q13033 - symbol:STRN3 "Striatin-3" species:9606... 156 4.6e-08 2
FB|FBgn0028496 - symbol:CG30116 species:7227 "Drosophila ... 162 4.9e-08 1
MGI|MGI:1333757 - symbol:Strn "striatin, calmodulin bindi... 155 5.6e-08 2
UNIPROTKB|Q12788 - symbol:TBL3 "Transducin beta-like prot... 158 5.8e-08 2
UNIPROTKB|F1NH54 - symbol:STRN3 "Uncharacterized protein"... 155 6.2e-08 2
UNIPROTKB|O43815 - symbol:STRN "Striatin" species:9606 "H... 154 7.3e-08 2
UNIPROTKB|F1S4P0 - symbol:STRN "Uncharacterized protein" ... 154 7.3e-08 2
UNIPROTKB|A5D7H2 - symbol:STRN3 "Striatin-3" species:9913... 154 7.7e-08 2
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 153 8.0e-08 1
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 154 8.3e-08 1
UNIPROTKB|Q9NRL3 - symbol:STRN4 "Striatin-4" species:9606... 151 8.8e-08 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 132 9.0e-08 3
UNIPROTKB|F8VYA6 - symbol:STRN4 "Striatin-4" species:9606... 151 9.1e-08 2
ASPGD|ASPL0000054735 - symbol:AN0292 species:162425 "Emer... 155 1.1e-07 2
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 138 1.1e-07 3
TAIR|locus:2061997 - symbol:AT2G47410 "AT2G47410" species... 157 1.3e-07 1
UNIPROTKB|Q7PS24 - symbol:Ciao1 "Probable cytosolic iron-... 148 1.3e-07 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 135 1.4e-07 2
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 149 1.6e-07 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 137 1.6e-07 2
RGD|1307285 - symbol:Ciao1 "cytosolic iron-sulfur protein... 147 1.7e-07 1
CGD|CAL0005182 - symbol:orf19.5413 species:5476 "Candida ... 142 1.8e-07 2
UNIPROTKB|Q5A7Q3 - symbol:PRP46 "Pre-mRNA-splicing factor... 142 1.8e-07 2
ASPGD|ASPL0000017699 - symbol:AN8187 species:162425 "Emer... 148 2.0e-07 1
CGD|CAL0005179 - symbol:orf19.5410 species:5476 "Candida ... 120 2.4e-07 2
RGD|1307030 - symbol:Strn4 "striatin, calmodulin binding ... 149 2.4e-07 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 135 2.6e-07 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 135 2.6e-07 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 135 2.6e-07 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 135 2.6e-07 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 135 2.6e-07 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 135 2.6e-07 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 135 2.6e-07 2
WARNING: Descriptions of 333 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2032452 [details] [associations]
symbol:AT1G24130 "AT1G24130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC002396 HOGENOM:HOG000236376 IPI:IPI00530155 PIR:T00642
RefSeq:NP_173823.1 UniGene:At.65928 ProteinModelPortal:O48679
SMR:O48679 STRING:O48679 PRIDE:O48679 EnsemblPlants:AT1G24130.1
GeneID:839025 KEGG:ath:AT1G24130 TAIR:At1g24130 InParanoid:O48679
OMA:GFRCVES PhylomeDB:O48679 ProtClustDB:CLSN2914172
Genevestigator:O48679 Uniprot:O48679
Length = 415
Score = 1031 (368.0 bits), Expect = 4.1e-104, P = 4.1e-104
Identities = 220/372 (59%), Positives = 264/372 (70%)
Query: 53 FRKQAPAASEHQCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITS 112
F+ Q+ + +H C ATLK K SSY+ SLA++ KLLY GSSN EIR W R+P + S
Sbjct: 50 FQHQSSSV-DHHCLATLKDK--SSYVSSLAVSDKLLYTGSSNSEIRVWPREPP-FSPEYS 105
Query: 113 TDVGDHANVVATGNGDAVKSLVVLGDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKY 172
T GD NVVA GNG VKSLV+LGDKL SAHQDHKIRVWKI + ++ + +
Sbjct: 106 T--GDDRNVVANGNG-GVKSLVILGDKLISAHQDHKIRVWKIIDESNR--------RGQK 154
Query: 173 YERIATLPTLNDRFTKCFLANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDR 232
Y+ +ATLPT+NDRF F + +YV+VRRHKKCTWVHHVD V SWDR
Sbjct: 155 YKCVATLPTMNDRFKTLFSSKSYVEVRRHKKCTWVHHVDAVSSLALSQDGSLLYSASWDR 214
Query: 233 TFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNK 292
+FKIWRTSDF+CL+S++ AHDDAINAIVVSK DGFVYTGSAD KIKVW K +K
Sbjct: 215 SFKIWRTSDFKCLDSIEKAHDDAINAIVVSK--DGFVYTGSADKKIKVWNKK------DK 266
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
KHSLV TL KH SAV ALA+S DG VLYSGACDRSILVWER +++GDD+ HM +
Sbjct: 267 KHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWER-----LINGDDEELHMSVV 321
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKC 412
GALRGH KAI+CLAV S+L+ SGS+D ++R+WRR ++GYSCLAVLEGH +PVK
Sbjct: 322 GALRGHRKAIMCLAVASDLVLSGSADKSLRVWRRGLM---EKEGYSCLAVLEGHTKPVKS 378
Query: 413 LT-AVVDSDYSN 423
L +V DSD SN
Sbjct: 379 LAVSVSDSD-SN 389
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 99/169 (58%), Positives = 125/169 (73%)
Query: 282 KKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
KK++ + +KKHSLV TL KH SAV ALA+S DG VLYSGACDRSILVWER +++
Sbjct: 256 KKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWER-----LIN 310
Query: 342 GDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLA 401
GDD+ HM + GALRGH KAI+CLAV S+L+ SGS+D ++R+WRR ++GYSCLA
Sbjct: 311 GDDEELHMSVVGALRGHRKAIMCLAVASDLVLSGSADKSLRVWRRGLM---EKEGYSCLA 367
Query: 402 VLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
VLEGH +PVK L AV SD S+ NSD+S +VYSGSLD +K+W +R
Sbjct: 368 VLEGHTKPVKSL-AVSVSD-SDSNSDYSC---MVYSGSLDLSLKVWNLR 411
>TAIR|locus:2170061 [details] [associations]
symbol:AT5G50120 "AT5G50120" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0009733 "response to auxin stimulus" evidence=RCA]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB026650
HOGENOM:HOG000236376 IPI:IPI00531222 RefSeq:NP_199823.1
UniGene:At.9028 ProteinModelPortal:Q9FG99 SMR:Q9FG99 STRING:Q9FG99
EnsemblPlants:AT5G50120.1 GeneID:835077 KEGG:ath:AT5G50120
TAIR:At5g50120 InParanoid:Q9FG99 OMA:RTLKIWR PhylomeDB:Q9FG99
ProtClustDB:CLSN2916602 Genevestigator:Q9FG99 Uniprot:Q9FG99
Length = 388
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 191/372 (51%), Positives = 242/372 (65%)
Query: 63 HQCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVV 122
HQC ATL V +SYI SL +AGK LY GS++G +R WN N + T + + +V+
Sbjct: 27 HQCIATL-VCHTASYISSLTLAGKRLYTGSNDGVVRLWNA---NTLE-TLAEASSNGDVI 81
Query: 123 A--TGNGDAVKSLVVLGDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLP 180
G G AVKSLV+L DKLF+AHQDHKIRVWKI N GK KY +AT+P
Sbjct: 82 TGERGGGGAVKSLVILADKLFTAHQDHKIRVWKI--NDVVEEDVGGK---KYMH-LATMP 135
Query: 181 TLNDRFTKCFLANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTS 240
T++DRF KC + N V++RRHKK +WVHHVD V SWDRT KIWRT+
Sbjct: 136 TISDRFAKCLMPKNQVEIRRHKKASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTT 195
Query: 241 DFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKK--HSLVQ 298
DF+CLES NAHDDAINA+ +S++ D +YTGS+D +IKVW+K V KK HSLV
Sbjct: 196 DFKCLESFTNAHDDAINAVALSENGD--IYTGSSDQRIKVWRKNINEENVKKKRKHSLVA 253
Query: 299 TLEKHKSAVTALALS-TDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRG 357
L +H S + ALALS T+G++L+SG D SILVWERD G G +V+ G LRG
Sbjct: 254 ILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDG----------GDIVVVGMLRG 303
Query: 358 HTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLT-AV 416
HT+++LCLAVVS++L SGS+D T+R+W+ S+ K YSCLA+LEGH PVKCLT A
Sbjct: 304 HTESVLCLAVVSDILCSGSADKTVRLWKCSA------KDYSCLAMLEGHLGPVKCLTGAF 357
Query: 417 VDSDYSNRNSDH 428
DS ++ S H
Sbjct: 358 RDSRKADEASYH 369
Score = 281 (104.0 bits), Expect = 7.2e-24, P = 7.2e-24
Identities = 69/162 (42%), Positives = 100/162 (61%)
Query: 290 VNKKHSLVQTLEKHKSAVTALALSTDG-TVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
+N+++ V+ KH S V L+ G L + S+L G+ +V DD G
Sbjct: 238 INEEN--VKKKRKH-SLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGD 294
Query: 349 MVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRR 408
+V+ G LRGHT+++LCLAVVS++L SGS+D T+R+W+ S+ K YSCLA+LEGH
Sbjct: 295 IVVVGMLRGHTESVLCLAVVSDILCSGSADKTVRLWKCSA------KDYSCLAMLEGHLG 348
Query: 409 PVKCLT-AVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
PVKCLT A DS R +D +S + +YSG LD ++K+WQ+
Sbjct: 349 PVKCLTGAFRDS----RKADEAS--YHIYSGGLDSQVKVWQV 384
>TAIR|locus:2024031 [details] [associations]
symbol:AT1G24530 "AT1G24530" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0006857 "oligopeptide transport"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC000103 HSSP:P16649
HOGENOM:HOG000236376 EMBL:AY045973 EMBL:AY079324 IPI:IPI00540711
RefSeq:NP_564219.1 UniGene:At.15901 ProteinModelPortal:Q9FYL1
SMR:Q9FYL1 STRING:Q9FYL1 PaxDb:Q9FYL1 EnsemblPlants:AT1G24530.1
GeneID:839068 KEGG:ath:AT1G24530 TAIR:At1g24530 InParanoid:Q9FYL1
OMA:REDSANH PhylomeDB:Q9FYL1 ProtClustDB:CLSN2687940
ArrayExpress:Q9FYL1 Genevestigator:Q9FYL1 Uniprot:Q9FYL1
Length = 418
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 136/248 (54%), Positives = 163/248 (65%)
Query: 173 YERIATLPTLNDRFTKCFLANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDR 232
Y+++ TLPTLNDR + L NYVQVRRHKK W+ H D V SWD+
Sbjct: 158 YKQLTTLPTLNDRLRRFALPKNYVQVRRHKKRLWIEHADAVTALAVSDGFIYS--VSWDK 215
Query: 233 TFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNK 292
T KIWR SD RC ES+K AHDDA+NAI VS +G VYTGSAD +I+VW K K
Sbjct: 216 TLKIWRASDLRCKESIK-AHDDAVNAIAVS--TNGTVYTGSADRRIRVWAKPTG----EK 268
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+H+LV TLEKHKSAV ALAL+ DG+VL+SG+CDRSILVWER+ D S +M ++
Sbjct: 269 RHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWERE---------DTSNYMAVR 319
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKC 412
GALRGH KAIL L VS+LL SGS+D T+RIWRR YSCL VL GH +PVK
Sbjct: 320 GALRGHDKAILSLFNVSDLLLSGSADRTVRIWRRGPD-----SSYSCLEVLSGHTKPVKS 374
Query: 413 LTAVVDSD 420
L AV + +
Sbjct: 375 LAAVREKE 382
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 89/261 (34%), Positives = 130/261 (49%)
Query: 63 HQCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVV 122
H +++ K++ S + LA+ G L+ S + E+ ++RD ++ D N
Sbjct: 71 HSVTSSFKLRERSLPVTCLAVNGGYLFAVSGH-EVSIYDRDMCAHL--------DTFNGQ 121
Query: 123 ATGNGDAVKSLVVLGDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTL 182
+G VKS+ G+K+F+AHQD KI VWK+ + SG Y+++ TLPTL
Sbjct: 122 DPFSG-TVKSVGFSGEKIFTAHQDGKIGVWKLT-------AKSG------YKQLTTLPTL 167
Query: 183 NDRFTKCFLANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDF 242
NDR + L NYVQVRRHKK W+ H D V SWD+T KIWR SD
Sbjct: 168 NDRLRRFALPKNYVQVRRHKKRLWIEHADAVTALAVSDGFIYS--VSWDKTLKIWRASDL 225
Query: 243 RCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKI---KVWKKLRAALQVNKKH-SLVQ 298
RC ES+K AHDDA+NAI VS + + + ++ +K + +KH S V
Sbjct: 226 RCKESIK-AHDDAVNAIAVSTNGTVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVN 284
Query: 299 TLEKHKSAVTALALSTDGTVL 319
L + + S D ++L
Sbjct: 285 ALALNDDGSVLFSGSCDRSIL 305
Score = 242 (90.2 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 76/226 (33%), Positives = 106/226 (46%)
Query: 252 HDDAINAIVVSKSNDGFVYTGSADTKIKVWKK--LRAALQVNKKHSLVQTL--------- 300
H DA+ A+ VS DGF+Y+ S D +K+W+ LR + V +
Sbjct: 194 HADAVTALAVS---DGFIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTVY 250
Query: 301 ----------------EKHKSAVTALALSTDGTVLYSGACDRSILV-WERDQGNYIVDGD 343
EK + V L + D S+L D+ + + +
Sbjct: 251 TGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWERE 310
Query: 344 DDSGHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
D S +M ++GALRGH KAIL L VS+LL SGS+D T+RIWRR YSCL VL
Sbjct: 311 DTSNYMAVRGALRGHDKAILSLFNVSDLLLSGSADRTVRIWRRGPD-----SSYSCLEVL 365
Query: 404 EGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
GH +PVK L AV + + + S + SGSLD E+K W++
Sbjct: 366 SGHTKPVKSLAAVREKELDDVVS--------IISGSLDGEVKCWKV 403
Score = 143 (55.4 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 51/177 (28%), Positives = 84/177 (47%)
Query: 229 SWDRTFKIWR--TSDFR-CLESVKNAHDDAINAIVVSKSNDGFV-YTGSADTKIKVWKKL 284
S DR ++W T + R L + H A+NA+ ++ +DG V ++GS D I VW++
Sbjct: 253 SADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALN--DDGSVLFSGSCDRSILVWER- 309
Query: 285 RAALQVNKKHSLVQ-TLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGD 343
+ + V+ L H A+ +L +D +L SG+ DR++ +W R
Sbjct: 310 ----EDTSNYMAVRGALRGHDKAILSLFNVSD--LLLSGSADRTVRIWRRGP-------- 355
Query: 344 DDSGHMVLKGALRGHTKAILCLAVVSNL-------LFSGSSDNTIRIWRRSSSVTDH 393
DS + L+ L GHTK + LA V + SGS D ++ W+ S + D+
Sbjct: 356 -DSSYSCLE-VLSGHTKPVKSLAAVREKELDDVVSIISGSLDGEVKCWKVSVTKPDN 410
>TAIR|locus:2074825 [details] [associations]
symbol:AT3G50390 "AT3G50390" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BT030030 IPI:IPI00547079
RefSeq:NP_190608.2 UniGene:At.50263 ProteinModelPortal:A2RVN9
SMR:A2RVN9 STRING:A2RVN9 PRIDE:A2RVN9 EnsemblPlants:AT3G50390.1
GeneID:824203 KEGG:ath:AT3G50390 TAIR:At3g50390
HOGENOM:HOG000236376 InParanoid:A2RVN9 OMA:HKKLLQF PhylomeDB:A2RVN9
ProtClustDB:CLSN2681936 Genevestigator:A2RVN9 Uniprot:A2RVN9
Length = 469
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 90/264 (34%), Positives = 140/264 (53%)
Query: 88 LYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVLGDKLFSAHQDH 147
+Y +++G++ D N + + V + ++ + N VK++V+ GDK+F+ HQD
Sbjct: 101 IYSLATSGDLLYTGSDSKN-IRVWKNHV-EFSSFKS--NSGLVKAIVLAGDKIFTGHQDG 156
Query: 148 KIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYVQ-VRRHKKCTW 206
KIRVWK + K N + R+ T+P L D + ++Y RR++
Sbjct: 157 KIRVWK----------AASKESN-VHRRVGTMPNLLDYIRNSIVPSSYFNFTRRNRSSAA 205
Query: 207 V--HHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKS 264
+ H+D + SWD+TFK+WR SD RC+ESV NAH+DA+NA+V
Sbjct: 206 LGFRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESV-NAHEDAVNAVV--SG 262
Query: 265 NDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGAC 324
DG V+TGSAD +KVW++ A KH +TL K AVTA+A+ T++Y G+
Sbjct: 263 FDGLVFTGSADGTVKVWRREDQAKDT--KHFFSETLLKQDCAVTAIAVDQSATLVYCGSS 320
Query: 325 DRSILVWERDQGNYIVDGDDDSGH 348
D ++ WER+ N + +G GH
Sbjct: 321 DGTVNFWERE--NNMKNGGVLKGH 342
Score = 357 (130.7 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 82/200 (41%), Positives = 117/200 (58%)
Query: 250 NAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTA 309
NAH+DA+NA+V DG V+TGSAD +KVW++ A KH +TL K AVTA
Sbjct: 250 NAHEDAVNAVV--SGFDGLVFTGSADGTVKVWRREDQAKDT--KHFFSETLLKQDCAVTA 305
Query: 310 LALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVS 369
+A+ T++Y G+ D ++ WER+ N + +G G L+GH A+LCL
Sbjct: 306 IAVDQSATLVYCGSSDGTVNFWERE--NNMKNG----------GVLKGHKLAVLCLVAAG 353
Query: 370 NLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHS 429
NL+FSGS+D IR+WRR +H CL+VL GH PVKCL V+ D + + +
Sbjct: 354 NLMFSGSADLGIRVWRRPEGGGEHV----CLSVLTGHAGPVKCLA--VERDQESVSGERR 407
Query: 430 STSFLVYSGSLDCEIKIWQI 449
++VYSGSLD +K+W++
Sbjct: 408 ---WIVYSGSLDRSVKMWRV 424
Score = 161 (61.7 bits), Expect = 8.3e-20, Sum P(2) = 8.3e-20
Identities = 58/176 (32%), Positives = 83/176 (47%)
Query: 229 SWDRTFKIWRTSDF-----RCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKK 283
S D T K+WR D D A+ AI V +S VY GS+D + W++
Sbjct: 271 SADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQSAT-LVYCGSSDGTVNFWER 329
Query: 284 LRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGD 343
+ N K+ V L+ HK AV L L G +++SG+ D I VW R +G G+
Sbjct: 330 -----ENNMKNGGV--LKGHKLAV--LCLVAAGNLMFSGSADLGIRVWRRPEGG----GE 376
Query: 344 DDSGHMVLKGALRGHTKAILCLAV------VSN----LLFSGSSDNTIRIWRRSSS 389
H+ L L GH + CLAV VS +++SGS D ++++WR S S
Sbjct: 377 ----HVCLS-VLTGHAGPVKCLAVERDQESVSGERRWIVYSGSLDRSVKMWRVSES 427
Score = 148 (57.2 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 41/113 (36%), Positives = 58/113 (51%)
Query: 77 YIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVL 136
+I SLA +G LLY GS + IR W N+V +S N VK++V+
Sbjct: 100 HIYSLATSGDLLYTGSDSKNIRVWK----NHVEFSSFK----------SNSGLVKAIVLA 145
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKY-YERIATLPTLNDRFTK 188
GDK+F+ HQD KIRVWK + S + G + N Y R + +P+ FT+
Sbjct: 146 GDKIFTGHQDGKIRVWKAASKESNVHRRVGTMPNLLDYIRNSIVPSSYFNFTR 198
Score = 75 (31.5 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 358 HTKAILCLAVVSN--LLFSGSSDNTIRIWRRSS-----SVTDHQKGYSCLAVLEG 405
H AI CLA+ + LL+SGS D T ++WR S SV H+ + AV+ G
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVN--AVVSG 262
Score = 64 (27.6 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 72 KGNSSYIPSLAIAGKLLYGGSSNGEIRAW 100
K NS + ++ +AG ++ G +G+IR W
Sbjct: 133 KSNSGLVKAIVLAGDKIFTGHQDGKIRVW 161
Score = 46 (21.3 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 87 LLYGGSSNGEIRAWNRD 103
L++ GS++G ++ W R+
Sbjct: 266 LVFTGSADGTVKVWRRE 282
>TAIR|locus:2066276 [details] [associations]
symbol:AT2G26490 "AT2G26490" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AC002505 HOGENOM:HOG000236376
ProtClustDB:CLSN2681936 EMBL:BT015086 EMBL:BT015900 IPI:IPI00520584
PIR:T00982 RefSeq:NP_180217.1 UniGene:At.50101
ProteinModelPortal:O48716 SMR:O48716 STRING:O48716 PaxDb:O48716
PRIDE:O48716 EnsemblPlants:AT2G26490.1 GeneID:817190
KEGG:ath:AT2G26490 TAIR:At2g26490 InParanoid:O48716 OMA:KVSPKNG
PhylomeDB:O48716 ArrayExpress:O48716 Genevestigator:O48716
Uniprot:O48716
Length = 465
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 87/214 (40%), Positives = 124/214 (57%)
Query: 126 NGDAVKSLVVLGDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDR 185
N VK++V+ G+K+F+ HQD KIRVWK+ + + SG TLPTL D
Sbjct: 133 NSGLVKAIVISGEKIFTGHQDGKIRVWKVSPKNQSLHKRSG-----------TLPTLKDI 181
Query: 186 FTKCFLANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCL 245
F NYV+V++H+ W+ H D V SWDRT K+WR +D +CL
Sbjct: 182 FKASLKPRNYVEVKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCL 241
Query: 246 ESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKS 305
ES+ AHDDA+N++V + + V++GSAD +K WK+ + KH+L+QTL K +S
Sbjct: 242 ESIP-AHDDAVNSVV--STTEAIVFSGSADGTVKAWKRDQQGKYT--KHTLMQTLTKQES 296
Query: 306 AVTALALSTDGTVLYSGACDRSILVWERD-QGNY 338
AVTALA+S +G +Y G+ D + WER+ Q NY
Sbjct: 297 AVTALAVSKNGAAVYFGSSDGLVNFWEREKQLNY 330
Score = 367 (134.2 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 83/200 (41%), Positives = 120/200 (60%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTAL 310
AHDDA+N++V + + V++GSAD +K WK+ + KH+L+QTL K +SAVTAL
Sbjct: 246 AHDDAVNSVV--STTEAIVFSGSADGTVKAWKRDQQGKYT--KHTLMQTLTKQESAVTAL 301
Query: 311 ALSTDGTVLYSGACDRSILVWERD-QGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVS 369
A+S +G +Y G+ D + WER+ Q NY G G L+GH A+LCL V
Sbjct: 302 AVSKNGAAVYFGSSDGLVNFWEREKQLNY--------G-----GILKGHKLAVLCLEVAG 348
Query: 370 NLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHS 429
+L+FSGS+D TI +W+R ++ ++CL+VL GH PVKCL D + S R
Sbjct: 349 SLVFSGSADKTICVWKRDGNI------HTCLSVLTGHTGPVKCLAVEADREASERRDK-- 400
Query: 430 STSFLVYSGSLDCEIKIWQI 449
++VYSGSLD +K+W +
Sbjct: 401 --KWIVYSGSLDKSVKVWGV 418
Score = 160 (61.4 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 56/180 (31%), Positives = 87/180 (48%)
Query: 229 SWDRTFKIWRTSDF-----RCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKK 283
S D T K W+ L + A+ A+ VSK N VY GS+D + W++
Sbjct: 266 SADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSK-NGAAVYFGSSDGLVNFWER 324
Query: 284 LRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGD 343
+ Q+N + + L+ HK AV L L G++++SG+ D++I VW+RD GN
Sbjct: 325 EK---QLN--YGGI--LKGHKLAV--LCLEVAGSLVFSGSADKTICVWKRD-GNI----- 369
Query: 344 DDSGHMVLKGALRGHTKAILCLAVVSN-----------LLFSGSSDNTIRIWRRSSSVTD 392
H L L GHT + CLAV ++ +++SGS D ++++W S S D
Sbjct: 370 ----HTCLS-VLTGHTGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVWGVSESFID 424
Score = 121 (47.7 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 32/92 (34%), Positives = 45/92 (48%)
Query: 77 YIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVL 136
+I SLA LLY GS + IR W N ++ N VK++V+
Sbjct: 98 HIYSLAATKDLLYTGSDSKNIRVWK----NLKEFSAFKC----------NSGLVKAIVIS 143
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKL 168
G+K+F+ HQD KIRVWK+ + + SG L
Sbjct: 144 GEKIFTGHQDGKIRVWKVSPKNQSLHKRSGTL 175
Score = 88 (36.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 35/107 (32%), Positives = 48/107 (44%)
Query: 54 RKQAPAASEHQCSATLKVKGNSSYIPSLAIA--GKLLYGGSSNGEIRAWNRDPN-NYVNI 110
R Q ++H TL K S+ + +LA++ G +Y GSS+G + W R+ NY I
Sbjct: 276 RDQQGKYTKHTLMQTL-TKQESA-VTALAVSKNGAAVYFGSSDGLVNFWEREKQLNYGGI 333
Query: 111 TSTDVGDHANVVATGNGDAVKSLVVLGDKLFSAHQDHKIRVWKIDNN 157
G+ AV L V G +FS D I VWK D N
Sbjct: 334 LK------------GHKLAVLCLEVAGSLVFSGSADKTICVWKRDGN 368
Score = 76 (31.8 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 21/85 (24%), Positives = 36/85 (42%)
Query: 229 SWDRTFKIWRTSD--FRCLESVKNAHDDAINAIVVSKSNDG--------FVYTGSADTKI 278
S D+T +W+ CL SV H + + V + VY+GS D +
Sbjct: 355 SADKTICVWKRDGNIHTCL-SVLTGHTGPVKCLAVEADREASERRDKKWIVYSGSLDKSV 413
Query: 279 KVWKKLRAALQVNKKHSLVQTLEKH 303
KVW + + +N+ + Q ++H
Sbjct: 414 KVWGVSESFIDMNQMSMMQQQQQQH 438
Score = 72 (30.4 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 72 KGNSSYIPSLAIAGKLLYGGSSNGEIRAWNRDPNN 106
K NS + ++ I+G+ ++ G +G+IR W P N
Sbjct: 131 KCNSGLVKAIVISGEKIFTGHQDGKIRVWKVSPKN 165
Score = 58 (25.5 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 130 VKSLVVLGDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLK 169
+ SL D L++ IRVWK SA+ SG +K
Sbjct: 99 IYSLAATKDLLYTGSDSKNIRVWKNLKEFSAFKCNSGLVK 138
Score = 54 (24.1 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 87 LLYGGSSNGEIRAWNRD 103
+++ GS++G ++AW RD
Sbjct: 261 IVFSGSADGTVKAWKRD 277
>TAIR|locus:2083710 [details] [associations]
symbol:AT3G51930 "AT3G51930" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AL049711 HOGENOM:HOG000236376 EMBL:BT008335
EMBL:AK228303 IPI:IPI00547415 PIR:T49072 RefSeq:NP_190761.1
UniGene:At.35344 ProteinModelPortal:Q9SV11 SMR:Q9SV11 STRING:Q9SV11
PRIDE:Q9SV11 EnsemblPlants:AT3G51930.1 GeneID:824356
KEGG:ath:AT3G51930 TAIR:At3g51930 InParanoid:Q9SV11 OMA:SKVFTAH
PhylomeDB:Q9SV11 ProtClustDB:CLSN2684735 Genevestigator:Q9SV11
Uniprot:Q9SV11
Length = 415
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 114/317 (35%), Positives = 169/317 (53%)
Query: 78 IPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGD-AVKSLVVL 136
+ SLA+ G+ L S +I W + P D+ A G GD +VK+LV +
Sbjct: 64 VSSLALCGEFLLSASQGKDIIVWQQ-P---------DLKIFAKF---GQGDGSVKALVSV 110
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYV 196
G K+F+AHQD +IRVWK+ S +N + + TLPT D K +NYV
Sbjct: 111 GSKVFTAHQDSRIRVWKVSRRNS---------ENAF-RLVDTLPTTKDYLGKFMKQSNYV 160
Query: 197 QVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAI 256
Q RR+ K W+ H D++ SWD+T K+WR SD +CLES+K AHDDAI
Sbjct: 161 QTRRNHKRLWIEHADSISCLAVHAGIIYSG--SWDKTLKVWRLSDLKCLESIK-AHDDAI 217
Query: 257 NAIVVSKSNDGFVYTGSADTKIKVW-KKLRAALQVNKK-----HSLVQTLE-KHKSAVTA 309
N +V + DG VY+ SAD K+K+W K+ R ++ H L TLE + + +V +
Sbjct: 218 NGLV---AGDGRVYSASADGKVKIWGKEKRKQIESTSSSSSSLHVLKATLEGRAEVSVNS 274
Query: 310 LALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVS 369
+ +S DG +Y G D ++ WE+ + +GD + + + RGH A+LC+ VV
Sbjct: 275 VVVSGDGNWVYGGGSDGFVIGWEKKEK----EGDFEEWRLGFE--TRGHNMAVLCMCVVG 328
Query: 370 NLLFSGSSDNTIRIWRR 386
++ SGS+D +I +WRR
Sbjct: 329 EMVCSGSADKSIGLWRR 345
Score = 235 (87.8 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 67/205 (32%), Positives = 104/205 (50%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTAL 310
AHDDAIN +V + DG VY+ SAD K+K+W K + Q+ S +L K+ +
Sbjct: 212 AHDDAINGLV---AGDGRVYSASADGKVKIWGKEKRK-QIESTSSSSSSLHVLKATLEGR 267
Query: 311 ALSTDGTVLYSGACDRSILVWERDQGNYIV-----DGDDDSGHMVLKGALRGHTKAILCL 365
A + +V+ SG D + V+ +++ + + D L RGH A+LC+
Sbjct: 268 AEVSVNSVVVSG--DGN-WVYGGGSDGFVIGWEKKEKEGDFEEWRLGFETRGHNMAVLCM 324
Query: 366 AVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSC-LAVLEGHRRPVKCLTAVVDSDYSNR 424
VV ++ SGS+D +I +WRR VT G C V+ GH PVKCL A
Sbjct: 325 CVVGEMVCSGSADKSIGLWRRE--VT----GMLCKFGVIHGHEGPVKCLQA--------- 369
Query: 425 NSDHSSTSFLVYSGSLDCEIKIWQI 449
+ ++ F++YSG LD +++W +
Sbjct: 370 SPNNVGAGFMLYSGGLDKSLRVWWV 394
Score = 49 (22.3 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 122 VATGNGDAVKSLVVLGDKLFSAHQDHKIRVWK 153
V + + +V SL + G+ L SA Q I VW+
Sbjct: 56 VLSAHVGSVSSLALCGEFLLSASQGKDIIVWQ 87
>TAIR|locus:2085929 [details] [associations]
symbol:AT3G18950 "AT3G18950" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AP000735
HOGENOM:HOG000236376 ProtClustDB:CLSN2681936 EMBL:BT005434
EMBL:AK117650 IPI:IPI00535619 RefSeq:NP_188525.1 UniGene:At.38474
ProteinModelPortal:Q9LJ71 SMR:Q9LJ71 STRING:Q9LJ71
EnsemblPlants:AT3G18950.1 GeneID:821427 KEGG:ath:AT3G18950
TAIR:At3g18950 InParanoid:Q9LJ71 OMA:LAINQES PhylomeDB:Q9LJ71
Genevestigator:Q9LJ71 Uniprot:Q9LJ71
Length = 473
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 110/327 (33%), Positives = 161/327 (49%)
Query: 88 LYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVLGD-KLFSAHQD 146
+Y +++G++ D N + + D+ DH +T VK++V+ GD ++F+ HQD
Sbjct: 141 VYSLAASGDLLFTGSDSKN-IRVWK-DLKDHTGFKSTSG--LVKAIVITGDNRIFTGHQD 196
Query: 147 HKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYVQVRRHKKCTW 206
KIRVW+ K + Y RI +LPTL + TK NYV+VRR K
Sbjct: 197 GKIRVWR-----------GSKRRTGGYSRIGSLPTLKEFLTKSVNPKNYVEVRRRKNVLK 245
Query: 207 VHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSND 266
+ H D V SWD+T K+WR SD +CLES++ AHDDAIN V+ D
Sbjct: 246 IRHYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQ-AHDDAINT--VAAGFD 302
Query: 267 GFVYTGSADTKIKVWKKLRAALQ-VNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACD 325
++TGSAD +KVWK+ LQ KH LV L K ++AVTALA++ V+Y G+ D
Sbjct: 303 DLLFTGSADGTLKVWKR---ELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGSSD 359
Query: 326 RSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSNL-LFSGSSDNTIRIW 384
++ WE + Y+ G GH + L +L N+ ++ + D +
Sbjct: 360 GTVNFWEGQK--YLSHGGTLRGHRLAVLCLAAAGSLVLSGGADKNICVWRRNGDGSHSCL 417
Query: 385 RRSSSVTDHQKGYSCLAVLE----GHR 407
S + DH CL +E GHR
Sbjct: 418 ---SVLMDHVGPVKCLTAVEDDGEGHR 441
Score = 211 (79.3 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 43/97 (44%), Positives = 60/97 (61%)
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKC 412
G LRGH A+LCLA +L+ SG +D I +WRR+ + +SCL+VL H PVKC
Sbjct: 375 GTLRGHRLAVLCLAAAGSLVLSGGADKNICVWRRNGDGS-----HSCLSVLMDHVGPVKC 429
Query: 413 LTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
LTAV D +R + ++VYSGSLD +K+W++
Sbjct: 430 LTAVEDDGEGHR--EKGDQKWIVYSGSLDKSVKVWRV 464
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 88/358 (24%), Positives = 150/358 (41%)
Query: 77 YIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTD--------VGDHANVVATGNGD 128
++ SLA +G LL+ GS + IR W +D ++ ST GD N + TG+ D
Sbjct: 140 HVYSLAASGDLLFTGSDSKNIRVW-KDLKDHTGFKSTSGLVKAIVITGD--NRIFTGHQD 196
Query: 129 AVKSLVVLGDKLFSAHQDH-----KIRVWKIDN-NTSAYYSTSGK---LKNKYYERIATL 179
K V G K + ++ + + N Y + LK ++Y+ ++ L
Sbjct: 197 G-KIRVWRGSKRRTGGYSRIGSLPTLKEFLTKSVNPKNYVEVRRRKNVLKIRHYDAVSCL 255
Query: 180 PTLNDRFTKCFLAN--NYVQVRR--HKKC--TWVHHVDTVXXXXXXXXXXXXXXTSWDRT 233
+LN+ + + ++V R KC + H D + ++ D T
Sbjct: 256 -SLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDDLLFTGSA-DGT 313
Query: 234 FKIWR-------TSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
K+W+ T F L +V ++A+ A+ V+ + VY GS+D + W+
Sbjct: 314 LKVWKRELQGKGTKHF--LVNVLMKQENAVTALAVNITA-AVVYCGSSDGTVNFWEG--- 367
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
Q H TL H+ AV LA + G+++ SG D++I VW R+ GD
Sbjct: 368 --QKYLSHG--GTLRGHRLAVLCLAAA--GSLVLSGGADKNICVWRRN-------GD--G 412
Query: 347 GHMVLKGALRGHTKAILCLAVVSN-------------LLFSGSSDNTIRIWRRSSSVT 391
H L L H + CL V + +++SGS D ++++WR + S +
Sbjct: 413 SHSCLS-VLMDHVGPVKCLTAVEDDGEGHREKGDQKWIVYSGSLDKSVKVWRVTESAS 469
Score = 116 (45.9 bits), Expect = 0.00089, P = 0.00089
Identities = 38/138 (27%), Positives = 65/138 (47%)
Query: 281 WKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERD-QGNYI 339
W K +++ L ++++ H A+ +A D +L++G+ D ++ VW+R+ QG
Sbjct: 269 WDKTLKVWRLSDSKCL-ESIQAHDDAINTVAAGFDD-LLFTGSADGTLKVWKRELQGK-- 324
Query: 340 VDGDDDSGHMVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWRRSSSVTDHQKGY 397
+ H ++ L A+ LAV + +++ GSSD T+ W + QK
Sbjct: 325 -----GTKHFLVN-VLMKQENAVTALAVNITAAVVYCGSSDGTVNFW-------EGQKYL 371
Query: 398 SCLAVLEGHRRPVKCLTA 415
S L GHR V CL A
Sbjct: 372 SHGGTLRGHRLAVLCLAA 389
>TAIR|locus:2010157 [details] [associations]
symbol:AT1G49450 "AT1G49450" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC007504
ProtClustDB:CLSN2681936 IPI:IPI00540218 PIR:B96531
RefSeq:NP_175369.1 UniGene:At.28389 ProteinModelPortal:Q9XIB2
SMR:Q9XIB2 STRING:Q9XIB2 PRIDE:Q9XIB2 EnsemblPlants:AT1G49450.1
GeneID:841369 KEGG:ath:AT1G49450 TAIR:At1g49450 InParanoid:Q9XIB2
OMA:WEREKHL PhylomeDB:Q9XIB2 Genevestigator:Q9XIB2 Uniprot:Q9XIB2
Length = 471
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 108/320 (33%), Positives = 160/320 (50%)
Query: 88 LYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVLGD-KLFSAHQD 146
+Y +++G++ D N + + D+ D + +T VK++VV D ++F+ HQD
Sbjct: 137 VYSLAASGDLLFTGSDSKN-IRVWK-DLKDFSGFKSTSG--FVKAIVVTRDNRVFTGHQD 192
Query: 147 HKIRVWKIDNNTSAYYSTSGKLKN-KYYERIATLPTLNDRFTKCFLANNYVQVRRHKKCT 205
KIRVW+ G KN + Y R+ +LPTL + TK NYV+VRR K
Sbjct: 193 GKIRVWR------------GSKKNPEKYSRVGSLPTLKEFLTKSVNPRNYVEVRRRKNVL 240
Query: 206 WVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSN 265
+ H D V SWD+T K+WR SD +CLES++ AHDDA+N +V
Sbjct: 241 KIRHFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIE-AHDDAVNTVV--SGF 297
Query: 266 DGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACD 325
D V+TGSAD +KVWK R KH LVQ L K ++AVTALA++ V+Y G+ D
Sbjct: 298 DDLVFTGSADGTLKVWK--REVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSD 355
Query: 326 RSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSNL-LFSGSSDNTIRIW 384
++ WER + Y+ GH + L +L N+ ++ + D +
Sbjct: 356 GTVNFWERQK--YLTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKRNGDGSHTCL 413
Query: 385 RRSSSVTDHQKGYSCLAVLE 404
S + DH+ CLA +E
Sbjct: 414 ---SVLMDHEGPVKCLAAVE 430
Score = 202 (76.2 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 39/106 (36%), Positives = 63/106 (59%)
Query: 348 HMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHR 407
++ KG + GH A+LCLA +LL SG +D I +W+R+ + ++CL+VL H
Sbjct: 366 YLTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKRNGDGS-----HTCLSVLMDHE 420
Query: 408 RPVKCLTAVVDSDYSNRNSDHSSTS----FLVYSGSLDCEIKIWQI 449
PVKCL AV +++ + + D ++VYSGSLD +K+W++
Sbjct: 421 GPVKCLAAVEEAEEDHNDGDDGGEKGDQRWIVYSGSLDNSVKVWRV 466
Score = 123 (48.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 39/135 (28%), Positives = 65/135 (48%)
Query: 281 WKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIV 340
W K +++ L +++E H AV + D V ++G+ D ++ VW+R+ V
Sbjct: 265 WDKTLKVWRLSDSKCL-ESIEAHDDAVNTVVSGFDDLV-FTGSADGTLKVWKRE-----V 317
Query: 341 DGDDDSGHMVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWRRSSSVTDHQKGYS 398
G + H++++ L A+ LAV +++ GSSD T+ W R +T H KG
Sbjct: 318 QGKEMK-HVLVQ-VLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWERQKYLT-H-KG-- 371
Query: 399 CLAVLEGHRRPVKCL 413
+ GHR V CL
Sbjct: 372 ---TIHGHRMAVLCL 383
Score = 110 (43.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 77 YIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVL 136
++ SLA +G LL+ GS + IR W +D ++ ST +G VK++VV
Sbjct: 136 HVYSLAASGDLLFTGSDSKNIRVW-KDLKDFSGFKST----------SG---FVKAIVVT 181
Query: 137 GD-KLFSAHQDHKIRVWKIDNNTSAYYSTSGKL 168
D ++F+ HQD KIRVW+ YS G L
Sbjct: 182 RDNRVFTGHQDGKIRVWRGSKKNPEKYSRVGSL 214
Score = 65 (27.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 27/115 (23%), Positives = 43/115 (37%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKK----L 284
S D T W + + + H A+ + + S + +G AD I VWK+
Sbjct: 353 SSDGTVNFWERQKYLTHKGTIHGHRMAVLCLATAGS---LLLSGGADKNICVWKRNGDGS 409
Query: 285 RAALQVNKKH-------SLVQTLEK-HKSAVTALALSTDGTVLYSGACDRSILVW 331
L V H + V+ E+ H ++YSG+ D S+ VW
Sbjct: 410 HTCLSVLMDHEGPVKCLAAVEEAEEDHNDGDDGGEKGDQRWIVYSGSLDNSVKVW 464
>TAIR|locus:2015423 [details] [associations]
symbol:AT1G47610 "AT1G47610" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC007519 HOGENOM:HOG000236376 ProtClustDB:CLSN2681936
IPI:IPI00534811 PIR:A96517 RefSeq:NP_175192.1 UniGene:At.47680
ProteinModelPortal:Q9SX94 SMR:Q9SX94 STRING:Q9SX94
EnsemblPlants:AT1G47610.1 GeneID:841170 KEGG:ath:AT1G47610
TAIR:At1g47610 InParanoid:Q9SX94 OMA:CVWRRDG PhylomeDB:Q9SX94
Genevestigator:Q9SX94 Uniprot:Q9SX94
Length = 351
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 90/247 (36%), Positives = 132/247 (53%)
Query: 88 LYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVLGD-KLFSAHQD 146
+Y ++ ++ D NNY+ + ++ + + + N VK++V+ + K+F+ HQD
Sbjct: 27 IYSLAATNDLLYTGSD-NNYIRVWK-NLNEFSGFKS--NSGLVKAIVISREAKVFTGHQD 82
Query: 147 HKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYVQVRRHKKCTW 206
KIRVWK TS K + Y R +LP L D +NYV+VRR + W
Sbjct: 83 GKIRVWK----------TSSK-NPRVYTRAGSLPALKDVLKSSVKPSNYVEVRRCRTALW 131
Query: 207 VHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSND 266
+ H D V SWDRT K+WR D +C+ES+K AHDDA+N++ ++S
Sbjct: 132 IKHSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIK-AHDDAVNSVTTAES-- 188
Query: 267 GFVYTGSADTKIKVWKK-LRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACD 325
V+TGSAD +KVWK+ +R HSL QTL K +SAVTAL T +YSG+ D
Sbjct: 189 -LVFTGSADGTVKVWKREIRGK---RTAHSLFQTLLKQESAVTALV--TSHMAVYSGSSD 242
Query: 326 RSILVWE 332
++ WE
Sbjct: 243 GAVNFWE 249
Score = 282 (104.3 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 73/187 (39%), Positives = 101/187 (54%)
Query: 266 DGFVYTGSADTKIKVWKK-LRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGAC 324
+ V+TGSAD +KVWK+ +R HSL QTL K +SAVTAL T +YSG+
Sbjct: 187 ESLVFTGSADGTVKVWKREIRGK---RTAHSLFQTLLKQESAVTALV--TSHMAVYSGSS 241
Query: 325 DRSILVWERDQGNYIVDGDDDSGHMVLKGA--LRGHTKAILCLAVVSNLLFSGSSDNTIR 382
D ++ WE GD +LK + H A+LC+A LLFSG++D I
Sbjct: 242 DGAVNFWEM--------GDKK----LLKHCEVFKKHRLAVLCIAAAGKLLFSGAADKKIC 289
Query: 383 IWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDC 442
+WRR V ++C++VL GH PVKCL AVV+ D ++YSGSLD
Sbjct: 290 VWRREGKV------HTCVSVLTGHTGPVKCL-AVVEPS-GGEEEDGGDGRLVLYSGSLDK 341
Query: 443 EIKIWQI 449
+K+W++
Sbjct: 342 SVKVWRV 348
Score = 135 (52.6 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 42/175 (24%), Positives = 86/175 (49%)
Query: 243 RCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL--VQTL 300
RC ++ H DA++ + +++ + G +Y+ S D +KVW+ H L ++++
Sbjct: 125 RCRTALWIKHSDAVSCLSLAE-DQGLLYSASWDRTVKVWRI----------HDLKCIESI 173
Query: 301 EKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTK 360
+ H AV ++ +T +++++G+ D ++ VW+R+ + G + H + + L+ +
Sbjct: 174 KAHDDAVNSV--TTAESLVFTGSADGTVKVWKRE-----IRGKR-TAHSLFQTLLKQES- 224
Query: 361 AILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTA 415
A+ L ++SGSSD + W D + C V + HR V C+ A
Sbjct: 225 AVTALVTSHMAVYSGSSDGAVNFWEMG----DKKLLKHC-EVFKKHRLAVLCIAA 274
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 49/185 (26%), Positives = 88/185 (47%)
Query: 228 TSWDRTF-KIWRT-SDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKK-- 283
T D + ++W+ ++F +S + + AIV+S+ + V+TG D KI+VWK
Sbjct: 39 TGSDNNYIRVWKNLNEFSGFKS----NSGLVKAIVISR--EAKVFTGHQDGKIRVWKTSS 92
Query: 284 --------------LRAALQVNKKHS-LVQTLE-------KHKSAVTALALSTDGTVLYS 321
L+ L+ + K S V+ KH AV+ L+L+ D +LYS
Sbjct: 93 KNPRVYTRAGSLPALKDVLKSSVKPSNYVEVRRCRTALWIKHSDAVSCLSLAEDQGLLYS 152
Query: 322 GACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTI 381
+ DR++ VW I D + +++ H A+ + +L+F+GS+D T+
Sbjct: 153 ASWDRTVKVWR------IHD-------LKCIESIKAHDDAVNSVTTAESLVFTGSADGTV 199
Query: 382 RIWRR 386
++W+R
Sbjct: 200 KVWKR 204
Score = 119 (46.9 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 33/93 (35%), Positives = 46/93 (49%)
Query: 77 YIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVL 136
+I SLA LLY GS N IR W ++ N + S N VK++V+
Sbjct: 26 HIYSLAATNDLLYTGSDNNYIRVW-KNLNEFSGFKS-------------NSGLVKAIVIS 71
Query: 137 GD-KLFSAHQDHKIRVWKIDNNTSAYYSTSGKL 168
+ K+F+ HQD KIRVWK + Y+ +G L
Sbjct: 72 REAKVFTGHQDGKIRVWKTSSKNPRVYTRAGSL 104
Score = 63 (27.2 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 63 HQCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAWNRD 103
H +K + + S+ A L++ GS++G ++ W R+
Sbjct: 165 HDLKCIESIKAHDDAVNSVTTAESLVFTGSADGTVKVWKRE 205
>TAIR|locus:2116194 [details] [associations]
symbol:AT4G34380 "AT4G34380" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL035521 EMBL:AL161585
HOGENOM:HOG000236376 ProtClustDB:CLSN2681936 EMBL:BT005888
EMBL:AK118385 IPI:IPI00526524 PIR:T04784 RefSeq:NP_195164.1
UniGene:At.31507 ProteinModelPortal:Q9SZ03 SMR:Q9SZ03 IntAct:Q9SZ03
STRING:Q9SZ03 EnsemblPlants:AT4G34380.1 GeneID:829588
KEGG:ath:AT4G34380 TAIR:At4g34380 InParanoid:Q9SZ03 OMA:VEEERAC
PhylomeDB:Q9SZ03 Genevestigator:Q9SZ03 Uniprot:Q9SZ03
Length = 495
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 99/320 (30%), Positives = 164/320 (51%)
Query: 88 LYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVLGDKLFSAHQDH 147
+Y +++G++ D N + + ++ +HA ++ +K++V+ GD++F+ HQD
Sbjct: 128 IYSLAASGDLLYTGSDSKN-IRVWK-NLKEHAGFKSSSG--LIKAIVIFGDRIFTGHQDG 183
Query: 148 KIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYVQVRRHKKCTWV 207
KIR+WK+ GK ++R+ TLPT ++++VRR++
Sbjct: 184 KIRIWKVSKRKP------GK-----HKRVGTLPTFKSMVKSSVNPKHFMEVRRNRNSVKT 232
Query: 208 HHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDG 267
H D V +SWD T K+WR +D +CLES+ +AHDDAIN+++ D
Sbjct: 233 KHNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESI-HAHDDAINSVM--SGFDD 289
Query: 268 FVYTGSADTKIKVWKKLRAALQ-VNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDR 326
V+TGSAD +KVWK+ LQ KH+L Q L K ++AVTALA+ + +++Y G+ D
Sbjct: 290 LVFTGSADGTVKVWKR---ELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDG 346
Query: 327 SILVWERDQGNYIVDGDDDSGHM--VLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
+ WER + ++ G GH VL + G+ +L + N+ D + +
Sbjct: 347 LVNYWERSKRSFT--GGILKGHKSAVLCLGIAGNL--LLSGSADKNICV-WRRDPSDKSH 401
Query: 385 RRSSSVTDHQKGYSCLAVLE 404
+ S +T H CLAV E
Sbjct: 402 QCLSVLTGHMGPVKCLAVEE 421
Score = 280 (103.6 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 63/161 (39%), Positives = 94/161 (58%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
KH+L Q L K ++AVTALA+ + +++Y G+ D + WER + ++ +G
Sbjct: 313 KHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWERSKRSF-------TG----- 360
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKC 412
G L+GH A+LCL + NLL SGS+D I +WRR S HQ CL+VL GH PVKC
Sbjct: 361 GILKGHKSAVLCLGIAGNLLLSGSADKNICVWRRDPSDKSHQ----CLSVLTGHMGPVKC 416
Query: 413 LTAVVDSDYSNRNSDHS----STSFLVYSGSLDCEIKIWQI 449
L AV + ++ + S +++YSGSLD +K+W++
Sbjct: 417 L-AVEEERACHQGAKASVAEGDRKWIIYSGSLDKSVKVWRV 456
Score = 138 (53.6 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 49/173 (28%), Positives = 80/173 (46%)
Query: 229 SWDRTFKIWRTS-----DFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKK 283
S D T K+W+ L V ++A+ A+ V KS VY GS+D + W++
Sbjct: 295 SADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAV-KSQSSIVYCGSSDGLVNYWER 353
Query: 284 LRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGD 343
+K+ L+ HKSAV L ++ G +L SG+ D++I VW RD +
Sbjct: 354 -------SKRSFTGGILKGHKSAVLCLGIA--GNLLLSGSADKNICVWRRDPSDKSHQCL 404
Query: 344 DD-SGHM------VLKGALRGHTKAILCLAVVSN--LLFSGSSDNTIRIWRRS 387
+GHM ++ H A +A +++SGS D ++++WR S
Sbjct: 405 SVLTGHMGPVKCLAVEEERACHQGAKASVAEGDRKWIIYSGSLDKSVKVWRVS 457
Score = 130 (50.8 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 30/92 (32%), Positives = 48/92 (52%)
Query: 77 YIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVL 136
+I SLA +G LLY GS + IR W ++ +HA ++ +K++V+
Sbjct: 127 HIYSLAASGDLLYTGSDSKNIRVWK------------NLKEHAGFKSSSG--LIKAIVIF 172
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKL 168
GD++F+ HQD KIR+WK+ + G L
Sbjct: 173 GDRIFTGHQDGKIRIWKVSKRKPGKHKRVGTL 204
Score = 57 (25.1 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 411 KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQ 448
KCL ++ D + NS S LV++GS D +K+W+
Sbjct: 268 KCLESIHAHDDAI-NSVMSGFDDLVFTGSADGTVKVWK 304
Score = 56 (24.8 bits), Expect = 6.7e-25, Sum P(2) = 6.7e-25
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 72 KGNSSYIPSLAIAGKLLYGGSSNGEIRAWN---RDPNNYVNI 110
K +S I ++ I G ++ G +G+IR W R P + +
Sbjct: 160 KSSSGLIKAIVIFGDRIFTGHQDGKIRIWKVSKRKPGKHKRV 201
Score = 46 (21.3 bits), Expect = 7.5e-24, Sum P(2) = 7.5e-24
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 87 LLYGGSSNGEIRAWNRD 103
L++ GS++G ++ W R+
Sbjct: 290 LVFTGSADGTVKVWKRE 306
Score = 40 (19.1 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 229 SWDRTFKIWRTSD 241
S D++ K+WR S+
Sbjct: 446 SLDKSVKVWRVSE 458
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 196 (74.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 60/184 (32%), Positives = 90/184 (48%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S DRT ++W +C+ +K ++ + AI +S ND F+ GS D I+VW
Sbjct: 421 SGDRTARLWDVETGQCI--LKLEIENGVTAIAISP-NDQFIAVGSLDQIIRVW------- 470
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
+ +LV+ LE HK +V ++A S D ++L SG+ D++I VWE Q V
Sbjct: 471 --SVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWEL-QATRSVGLSAIKPE 527
Query: 349 MVLKGALRGHTKAILCLAVV--SNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
+ K GHT +L +AV S SGS D +++ W D Q G S L +GH
Sbjct: 528 GICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFW-------DLQTGQSYLTC-QGH 579
Query: 407 RRPV 410
+ V
Sbjct: 580 KNSV 583
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 167 (63.8 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 54/189 (28%), Positives = 88/189 (46%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRC-LESVKNAHDDAINAIVVSKSNDG 267
H D V S ++T K+W ++ C L+ H + + +V S DG
Sbjct: 154 HSDWVLSVAFSPDGQLLASGSAEKTIKLWDSAT--CGLKHTLGGHSNWVLPLVFSP--DG 209
Query: 268 -FVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDR 326
+ +GS D IK+W +L KH TLE H + + +LA S +G +L SG+ D
Sbjct: 210 RLLASGSNDATIKLWDPPSGSL----KH----TLEGHSNKIESLAFSPNGQLLASGSSDA 261
Query: 327 SILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVV--SNLLFSGSSDNTIRIW 384
+I +W+ G++ + L+GH+ +L + S LL SGS DNTI++W
Sbjct: 262 TIKLWDTATGSF-------------RHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLW 308
Query: 385 RRSSSVTDH 393
++ + H
Sbjct: 309 DPATGILKH 317
Score = 131 (51.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 36/105 (34%), Positives = 53/105 (50%)
Query: 297 VQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALR 356
+QTLE H + + S DG +L SG+ D +I +W+ G LK L
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGG-------------LKQTLE 80
Query: 357 GHTKAILCLAVVSN--LLFSGSSDNTIRIWRRSSSVTDH-QKGYS 398
GH+ ++ +A N LL SGSSD TI++W +S H +G+S
Sbjct: 81 GHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHS 125
Score = 118 (46.6 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 37/107 (34%), Positives = 54/107 (50%)
Query: 295 SLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGA 354
SL T+E H V ++A S DG +L SG+ +++I +W DS LK
Sbjct: 146 SLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLW-------------DSATCGLKHT 192
Query: 355 LRGHTKAILCLAVVSN--LLFSGSSDNTIRIWRRSSSVTDHQ-KGYS 398
L GH+ +L L + LL SGS+D TI++W S H +G+S
Sbjct: 193 LGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHS 239
Score = 115 (45.5 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 33/97 (34%), Positives = 49/97 (50%)
Query: 252 HDDAINAIVVSKSNDG-FVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTAL 310
H D I + S DG + +GS DT IK+W L+ QTLE H S+V ++
Sbjct: 40 HSDWIETVTFSP--DGRLLASGSNDTTIKLWDPASGGLK--------QTLEGHSSSVQSV 89
Query: 311 ALSTDGTVLYSGACDRSILVWER--DQGNYIVDGDDD 345
A S +G +L SG+ D +I +W D + ++G D
Sbjct: 90 AFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSD 126
Score = 64 (27.6 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 71 VKGNSSYIPSLAIA--GKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVA-TGNG 127
++G+SS + S+A + G+LL GSS+ I+ WN ++ + T D VA + NG
Sbjct: 79 LEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWN-SASDSLKHTMEGHSDRVESVAFSPNG 137
Score = 42 (19.8 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 434 LVYSGSLDCEIKIW 447
L+ SGS D IK+W
Sbjct: 253 LLASGSSDATIKLW 266
Score = 41 (19.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 434 LVYSGSLDCEIKIW 447
L+ SGS D IK+W
Sbjct: 211 LLASGSNDATIKLW 224
Score = 40 (19.1 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 429 SSTSFLVYSGSLDCEIKIW 447
S S L+ SGS D IK+W
Sbjct: 290 SPDSQLLESGSGDNTIKLW 308
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 147 (56.8 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 66/312 (21%), Positives = 131/312 (41%)
Query: 88 LYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVLGDKLFSAHQDH 147
L S G +R W+ + V T T + D ++ + + + L +L +L +
Sbjct: 260 LVTAGSKGVLRVWDSSSSRCV-FTQT-LPDASSHTEDEDAEDEERLGLL--QLLLLPRTG 315
Query: 148 KIRVWKIDNNTSAYYSTSGKLKNK---YYERIATLPTLNDRFTKCFLANNYVQVRRHK-- 202
++ ++N Y + + ++ + Y + + + + T +A N Q++ +
Sbjct: 316 RLITVTAEHNILLYQTPTLAVQQQFVGYNDDVLDVKFVGKDDTHIAVATNSSQLKVFELS 375
Query: 203 --KCTWVH-HVDTVXXXXXXXXXXXXXXTSWDRTFKIWR--TSDFR--CLESVKNAHDDA 255
C +H H DT+ + D++ ++WR S R C+ H +A
Sbjct: 376 TNSCQILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQ-GTGHSNA 434
Query: 256 INAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEK-HKSAVTALALST 314
+ +I S+ FV +GS D +KVW ++ E+ H+ V ++ +S
Sbjct: 435 VGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSP 494
Query: 315 DGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCL--AVVSNLL 372
+ +L SG+ DR+ +W + D + L G RGH + + + + V +L
Sbjct: 495 NDKLLASGSQDRTAKLWA------LSD-------LRLLGVCRGHRRGVWSVQFSPVDQIL 541
Query: 373 FSGSSDNTIRIW 384
S S+D ++RIW
Sbjct: 542 GSASADGSVRIW 553
Score = 127 (49.8 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 52/199 (26%), Positives = 90/199 (45%)
Query: 235 KIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKH 294
K++ S C + + H D I +I V + F T + D ++VW R + + H
Sbjct: 370 KVFELSTNSC--QILHGHTDTILSIDVFRKGSMFA-TCAKDKSVRVW---RMDVSSGRVH 423
Query: 295 SLVQTLEKHKSAVTALALST-DGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKG 353
+ Q H +AV ++A S + SG+ D ++ VW+ + G + M +
Sbjct: 424 CVAQGTG-HSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPE----TTGAEGVMMMKARS 478
Query: 354 ALRGHTKAI--LCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVK 411
R H K + +C++ LL SGS D T ++W +++D + L V GHRR V
Sbjct: 479 TERAHEKDVNSVCVSPNDKLLASGSQDRTAKLW----ALSDLR----LLGVCRGHRRGVW 530
Query: 412 CLT-AVVDSDYSNRNSDHS 429
+ + VD + ++D S
Sbjct: 531 SVQFSPVDQILGSASADGS 549
Score = 87 (35.7 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 33/102 (32%), Positives = 50/102 (49%)
Query: 351 LKGALRGHTKAILCL--AVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRR 408
L G RGH + + + + V +L S S+D ++RIW S+ D +SCL EGH
Sbjct: 518 LLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIW----SIQD----FSCLKTFEGHDA 569
Query: 409 PVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
V L + + +R + LV SGS D +K+W I+
Sbjct: 570 SV--LKII----FVSRGTQ------LVSSGS-DGLVKLWTIK 598
Score = 41 (19.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 139 KLFSAHQDHKIRVWKI 154
+LFS+ D IR+W +
Sbjct: 164 QLFSSSSDCAIRIWDL 179
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 158 (60.7 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 52/185 (28%), Positives = 92/185 (49%)
Query: 229 SWDRTFKIW--RTSDFRCLESV-KNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLR 285
S DR K+ + DF ++ + + AH AI + V + + + GS D+ + +W K
Sbjct: 31 STDRKIKLVSVKYDDFTLIDVLDETAHKKAIRS-VAWRPHTSLLAAGSFDSTVSIWAKEE 89
Query: 286 AALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDD 345
+A + + L+ +E H++ V +A S DG L + + D+S+ +WE D+ G++
Sbjct: 90 SADRTFEM-DLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDES-----GEEY 143
Query: 346 SGHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEG 405
VL+ + K ++ + LL S S D+T+RIW+ D+ + C+AVL G
Sbjct: 144 ECISVLQEHSQD-VKHVIWHPSEA-LLASSSYDDTVRIWK------DYDDDWECVAVLNG 195
Query: 406 HRRPV 410
H V
Sbjct: 196 HEGTV 200
Score = 125 (49.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 47/194 (24%), Positives = 86/194 (44%)
Query: 229 SWDRTFKIWRTSDF--RCLE----SVKNAHDDAINAIVVSKSNDGF-VYTGSADTKIKVW 281
S+D T IW + R E ++ H++ + V+ SNDG+ + T S D + +W
Sbjct: 77 SFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKG--VAWSNDGYYLATCSRDKSVWIW 134
Query: 282 KKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
+ + +++ + L++H V + +L S + D ++ +W+ D
Sbjct: 135 ETDESG----EEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWK--------D 182
Query: 342 GDDDSGHMVLKGALRGHTKAILCLAVVSN----LLFSGSSDNTIRIWRRSSSVTDHQKGY 397
DDD + + L GH + L SGS D+T+R+W+ D Q+ +
Sbjct: 183 YDDDWECVAV---LNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEW 239
Query: 398 SCLAVL-EGHRRPV 410
C A+L + H+R V
Sbjct: 240 VCEAILPDVHKRQV 253
Score = 114 (45.2 bits), Expect = 0.00082, P = 0.00082
Identities = 37/151 (24%), Positives = 75/151 (49%)
Query: 265 NDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEK--HKSAVTALALSTDGTVLYSG 322
+ G + TGS D KIK+ +++ + +L+ L++ HK A+ ++A ++L +G
Sbjct: 23 SQGILATGSTDRKIKL-----VSVKYDD-FTLIDVLDETAHKKAIRSVAWRPHTSLLAAG 76
Query: 323 ACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN--LLFSGSSDNT 380
+ D ++ +W +++ D + M L + GH + +A ++ L + S D +
Sbjct: 77 SFDSTVSIWAKEESA------DRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKS 130
Query: 381 IRIWRRSSSVTDHQKGYSCLAVLEGHRRPVK 411
+ IW S + Y C++VL+ H + VK
Sbjct: 131 VWIWETDESGEE----YECISVLQEHSQDVK 157
Score = 59 (25.8 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 392 DHQKGYSCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQ 448
D+ + C+AVL GH V SD+ D + F + SGS D +++W+
Sbjct: 182 DYDDDWECVAVLNGHEG------TVWSSDF-----DKTEGVFRLCSGSDDSTVRVWK 227
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 161 (61.7 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 66/208 (31%), Positives = 93/208 (44%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTKIKVWKKL- 284
D + KIW S CL+ + + ++V+ S+D V +T +V L
Sbjct: 210 DNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG-EVLNTLI 268
Query: 285 ---RAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIV 340
A L + + L+ T K +S AV +A +TD T+ R +LV R N +V
Sbjct: 269 HHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITL-------RRVLVGHRAAVN-VV 320
Query: 341 DGDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWR 385
D DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 321 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW- 379
Query: 386 RSSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 380 ------DIECG-ACLRVLEGHEELVRCI 400
Score = 102 (41.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+H+L + + +++ L D + SG D SI +W D S LK
Sbjct: 178 RHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIW------------DKSSLECLK 225
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
L GHT ++LCL ++ +GSSD+T+R+W
Sbjct: 226 -VLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 256
Score = 98 (39.6 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 51/216 (23%), Positives = 84/216 (38%)
Query: 126 NGDAVKSLVVLGDKLFSAHQDHKIRVWKIDNNTSAYYST--SGK-LKNKYYERIATLPTL 182
N V L DK+ S +D+ I++W + T +G L +Y ER+ +
Sbjct: 190 NSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGS- 248
Query: 183 NDRFTKCFLANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDF 242
+D + + N + T +HH + V S DR+ +W +
Sbjct: 249 SDSTVRVWDVNTGEVLN-----TLIHHNEAVLHLRFSNGLMVT--CSKDRSIAVWDMASA 301
Query: 243 R--CLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTL 300
L V H A+N + +D ++ + S D IKVW V+TL
Sbjct: 302 TDITLRRVLVGHRAAVNVV---DFDDKYIVSASGDRTIKVWSTSTC--------EFVRTL 350
Query: 301 EKHKSAVTALALSTDGTVLYSGACDRSILVWERDQG 336
HK + L D V+ SG+ D +I +W+ + G
Sbjct: 351 NGHKRGIACLQYR-DRLVV-SGSSDNTIRLWDIECG 384
Score = 62 (26.9 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+CL VLEGH V+C+ + N+ + SG+ D +IK+W ++
Sbjct: 385 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDLQ 422
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 161 (61.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 66/208 (31%), Positives = 93/208 (44%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTKIKVWKKL- 284
D + KIW S CL+ + + ++V+ S+D V +T +V L
Sbjct: 244 DNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG-EVLNTLI 302
Query: 285 ---RAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIV 340
A L + + L+ T K +S AV +A +TD T+ R +LV R N +V
Sbjct: 303 HHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITL-------RRVLVGHRAAVN-VV 354
Query: 341 DGDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWR 385
D DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 355 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW- 413
Query: 386 RSSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 414 ------DIECG-ACLRVLEGHEELVRCI 434
Score = 102 (41.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+H+L + + +++ L D + SG D SI +W D S LK
Sbjct: 212 RHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIW------------DKSSLECLK 259
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
L GHT ++LCL ++ +GSSD+T+R+W
Sbjct: 260 -VLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 290
Score = 62 (26.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+CL VLEGH V+C+ + N+ + SG+ D +IK+W ++
Sbjct: 419 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDLQ 456
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 161 (61.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 66/208 (31%), Positives = 93/208 (44%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTKIKVWKKL- 284
D + KIW S CL+ + + ++V+ S+D V +T +V L
Sbjct: 259 DNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG-EVLNTLI 317
Query: 285 ---RAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIV 340
A L + + L+ T K +S AV +A +TD T+ R +LV R N +V
Sbjct: 318 HHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITL-------RRVLVGHRAAVN-VV 369
Query: 341 DGDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWR 385
D DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 370 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW- 428
Query: 386 RSSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 429 ------DIECG-ACLRVLEGHEELVRCI 449
Score = 102 (41.0 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+H+L + + +++ L D + SG D SI +W D S LK
Sbjct: 227 RHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIW------------DKSSLECLK 274
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
L GHT ++LCL ++ +GSSD+T+R+W
Sbjct: 275 -VLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 305
Score = 62 (26.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+CL VLEGH V+C+ + N+ + SG+ D +IK+W ++
Sbjct: 434 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDLQ 471
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 166 (63.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 53/202 (26%), Positives = 91/202 (45%)
Query: 253 DDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALAL 312
+D + + VS + ++ GS D ++VW L V + S ++ HK +V ++
Sbjct: 526 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL-VERLDSENESGTGHKDSVYSVVF 584
Query: 313 STDGTVLYSGACDRSILVWERDQGNYIVDGDD-DSGHMVLKGALRGHTKAILCLAVVSN- 370
+ DG + SG+ DRS+ +W N D +SG + GH +L +A N
Sbjct: 585 TRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG--TCEVTYIGHKDFVLSVATTQND 642
Query: 371 -LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHS 429
+ SGS D + W D + G + L +L+GHR V ++ V N
Sbjct: 643 EYILSGSKDRGVLFW-------DKKSG-NPLLMLQGHRNSV--ISVAV------ANGSPL 686
Query: 430 STSFLVYS-GSLDCEIKIWQIR 450
+ V++ GS DC+ +IW+ +
Sbjct: 687 GPEYNVFATGSGDCKARIWKYK 708
Score = 136 (52.9 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 48/200 (24%), Positives = 95/200 (47%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQV 290
DR +IW + R + + H+ I ++ S D V +GS D +++W LR
Sbjct: 464 DRLIRIWDIEN-RKIVMILQGHEQDIYSLDYFPSGDKLV-SGSGDRTVRIWD-LRTG--- 517
Query: 291 NKKHSLVQTLEKHKSAVTALALST-DGTVLYSGACDRSILVWERDQGNYI--VDGDDDSG 347
+ SL ++E VT +A+S DG + +G+ DR++ VW+ + G + +D +++SG
Sbjct: 518 --QCSLTLSIE---DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESG 572
Query: 348 HMVLKGALRGHTKAILCLAVVSN--LLFSGSSDNTIRIW--RRSSSVTDHQKGYS--CLA 401
GH ++ + + + SGS D ++++W + +++ +D + S C
Sbjct: 573 --------TGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEV 624
Query: 402 VLEGHRRPVKCLTAVVDSDY 421
GH+ V + + +Y
Sbjct: 625 TYIGHKDFVLSVATTQNDEY 644
Score = 126 (49.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 42/175 (24%), Positives = 79/175 (45%)
Query: 229 SWDRTFKIWRTSDFRCLESVKN------AHDDAINAIVVSKSNDGFVYTGSADTKIKVWK 282
S DR ++W + +E + + H D++ ++V ++ V +GS D +K+W
Sbjct: 546 SLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV-SGSLDRSVKLWN 604
Query: 283 KLRAALQVNKKHSLVQTLEK----HKSAVTALALSTDGTVLYSGACDRSILVWERDQGNY 338
A + + K T E HK V ++A + + + SG+ DR +L W++ GN
Sbjct: 605 LQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP 664
Query: 339 IVDGDDDSGHMVLKGALRGHTKAILCLAVVS--------NLLFSGSSDNTIRIWR 385
++ L+GH +++ +AV + N+ +GS D RIW+
Sbjct: 665 LL-------------MLQGHRNSVISVAVANGSPLGPEYNVFATGSGDCKARIWK 706
Score = 60 (26.2 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 23/80 (28%), Positives = 35/80 (43%)
Query: 77 YIPSLAIA--GKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLV 134
YI S+ + GK L G+ + IR W+ + V I G ++ + D S
Sbjct: 445 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ---GHEQDIYSL---DYFPS-- 496
Query: 135 VLGDKLFSAHQDHKIRVWKI 154
GDKL S D +R+W +
Sbjct: 497 --GDKLVSGSGDRTVRIWDL 514
Score = 45 (20.9 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 114 DVGDHANVVATGNGDA-VKSLVVLGDKLFSAH--QDHKIRVWKIDN 156
DV ++ N ++ + D ++S+ D F A +D IR+W I+N
Sbjct: 430 DV-ENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN 474
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 158 (60.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 65/208 (31%), Positives = 93/208 (44%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTKIKVWKKL- 284
D + KIW + CL+ + + ++V+ S+D V +T +V L
Sbjct: 227 DNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG-EVLNTLI 285
Query: 285 ---RAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIV 340
A L + + L+ T K +S AV +A +TD T+ R +LV R N +V
Sbjct: 286 HHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITL-------RRVLVGHRAAVN-VV 337
Query: 341 DGDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWR 385
D DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 338 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW- 396
Query: 386 RSSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 397 ------DIECG-ACLRVLEGHEELVRCI 417
Score = 99 (39.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+H+L + + +++ L D + SG D SI +W D + LK
Sbjct: 195 RHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIW------------DKTSLECLK 242
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
L GHT ++LCL ++ +GSSD+T+R+W
Sbjct: 243 -VLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 273
Score = 62 (26.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+CL VLEGH V+C+ + N+ + SG+ D +IK+W ++
Sbjct: 402 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDLQ 439
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 158 (60.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 65/208 (31%), Positives = 93/208 (44%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTKIKVWKKL- 284
D + KIW + CL+ + + ++V+ S+D V +T +V L
Sbjct: 227 DNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG-EVLNTLI 285
Query: 285 ---RAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIV 340
A L + + L+ T K +S AV +A +TD T+ R +LV R N +V
Sbjct: 286 HHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITL-------RRVLVGHRAAVN-VV 337
Query: 341 DGDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWR 385
D DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 338 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW- 396
Query: 386 RSSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 397 ------DIECG-ACLRVLEGHEELVRCI 417
Score = 99 (39.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+H+L + + +++ L D + SG D SI +W D + LK
Sbjct: 195 RHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIW------------DKTSLECLK 242
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
L GHT ++LCL ++ +GSSD+T+R+W
Sbjct: 243 -VLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 273
Score = 62 (26.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+CL VLEGH V+C+ + N+ + SG+ D +IK+W ++
Sbjct: 402 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDLQ 439
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 158 (60.7 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 65/208 (31%), Positives = 93/208 (44%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTKIKVWKKL- 284
D + KIW + CL+ + + ++V+ S+D V +T +V L
Sbjct: 246 DNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG-EVLNTLI 304
Query: 285 ---RAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIV 340
A L + + L+ T K +S AV +A +TD T+ R +LV R N +V
Sbjct: 305 HHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITL-------RRVLVGHRAAVN-VV 356
Query: 341 DGDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWR 385
D DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 357 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW- 415
Query: 386 RSSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 416 ------DIECG-ACLRVLEGHEELVRCI 436
Score = 99 (39.9 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+H+L + + +++ L D + SG D SI +W D + LK
Sbjct: 214 RHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIW------------DKTSLECLK 261
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
L GHT ++LCL ++ +GSSD+T+R+W
Sbjct: 262 -VLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 292
Score = 62 (26.9 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+CL VLEGH V+C+ + N+ + SG+ D +IK+W ++
Sbjct: 421 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDLQ 458
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 158 (60.7 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 65/208 (31%), Positives = 93/208 (44%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTKIKVWKKL- 284
D + KIW + CL+ + + ++V+ S+D V +T +V L
Sbjct: 247 DNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG-EVLNTLI 305
Query: 285 ---RAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIV 340
A L + + L+ T K +S AV +A +TD T+ R +LV R N +V
Sbjct: 306 HHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITL-------RRVLVGHRAAVN-VV 357
Query: 341 DGDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWR 385
D DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 358 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW- 416
Query: 386 RSSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 417 ------DIECG-ACLRVLEGHEELVRCI 437
Score = 99 (39.9 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+H+L + + +++ L D + SG D SI +W D + LK
Sbjct: 215 RHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIW------------DKTSLECLK 262
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
L GHT ++LCL ++ +GSSD+T+R+W
Sbjct: 263 -VLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 293
Score = 62 (26.9 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+CL VLEGH V+C+ + N+ + SG+ D +IK+W ++
Sbjct: 422 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDLQ 459
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 158 (60.7 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 65/208 (31%), Positives = 93/208 (44%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTKIKVWKKL- 284
D + KIW + CL+ + + ++V+ S+D V +T +V L
Sbjct: 259 DNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG-EVLNTLI 317
Query: 285 ---RAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIV 340
A L + + L+ T K +S AV +A +TD T+ R +LV R N +V
Sbjct: 318 HHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITL-------RRVLVGHRAAVN-VV 369
Query: 341 DGDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWR 385
D DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 370 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW- 428
Query: 386 RSSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 429 ------DIECG-ACLRVLEGHEELVRCI 449
Score = 99 (39.9 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+H+L + + +++ L D + SG D SI +W D + LK
Sbjct: 227 RHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIW------------DKTSLECLK 274
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
L GHT ++LCL ++ +GSSD+T+R+W
Sbjct: 275 -VLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 305
Score = 62 (26.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+CL VLEGH V+C+ + N+ + SG+ D +IK+W ++
Sbjct: 434 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDLQ 471
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 158 (60.7 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 65/208 (31%), Positives = 93/208 (44%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTKIKVWKKL- 284
D + KIW + CL+ + + ++V+ S+D V +T +V L
Sbjct: 259 DNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG-EVLNTLI 317
Query: 285 ---RAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIV 340
A L + + L+ T K +S AV +A +TD T+ R +LV R N +V
Sbjct: 318 HHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITL-------RRVLVGHRAAVN-VV 369
Query: 341 DGDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWR 385
D DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 370 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW- 428
Query: 386 RSSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 429 ------DIECG-ACLRVLEGHEELVRCI 449
Score = 99 (39.9 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+H+L + + +++ L D + SG D SI +W D + LK
Sbjct: 227 RHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIW------------DKTSLECLK 274
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
L GHT ++LCL ++ +GSSD+T+R+W
Sbjct: 275 -VLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 305
Score = 62 (26.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+CL VLEGH V+C+ + N+ + SG+ D +IK+W ++
Sbjct: 434 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDLQ 471
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 156 (60.0 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 65/208 (31%), Positives = 92/208 (44%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTKIKVWKKL- 284
D + KIW + CL+ + + ++V+ S+D V +T +V L
Sbjct: 232 DNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG-EVLNTLI 290
Query: 285 ---RAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIV 340
A L + + L+ T K +S AV +A TD T+ R +LV R N +V
Sbjct: 291 HHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITL-------RRVLVGHRAAVN-VV 342
Query: 341 DGDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWR 385
D DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 343 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW- 401
Query: 386 RSSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 402 ------DIECG-ACLRVLEGHEELVRCI 422
Score = 99 (39.9 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+H+L + + +++ L D + SG D SI +W D + LK
Sbjct: 200 RHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIW------------DKTSLECLK 247
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
L GHT ++LCL ++ +GSSD+T+R+W
Sbjct: 248 -VLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 278
Score = 62 (26.9 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+CL VLEGH V+C+ + N+ + SG+ D +IK+W ++
Sbjct: 407 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDLQ 444
Score = 37 (18.1 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 148 KIRVWKIDNNTSAYYSTSGKLKNKYYER 175
K +W+I N TS+ + + YE+
Sbjct: 17 KNTLWQISNGTSSVIVSRKRPSEGNYEK 44
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 75/318 (23%), Positives = 134/318 (42%)
Query: 79 PSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANV---VATGNGDAVKSLVV 135
P A L++ + + + + ++ N++ T DV +H + G+ AV S+
Sbjct: 246 PLQVYASALVFSPADSLIRKLFGKEEPNWIE-TKPDVANHWSPCLQALEGHEAAVLSVSY 304
Query: 136 LGDK--LFSAHQDHKIRVWKIDNNTSAYYST----SGKLKNKYYERIATL-PTLNDRFTK 188
D L SA D +++W D T + T S +++ + + L + +D K
Sbjct: 305 SHDSRLLASASDDRTVKIW--DTETGSLQHTLEGHSDLVRSVIFSHDSRLLASASDSTVK 362
Query: 189 CFLANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESV 248
+ + +H T H D V S D T KIW T L+
Sbjct: 363 IW--DTGTGSLQH---TLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT-GSLQHT 416
Query: 249 KNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVT 308
H D + +++ S + + + S D+ +K+W +LQ H TLE H+ V
Sbjct: 417 LEGHRDWVRSVIFSHDSQ-LLASASDDSTVKIWDTGTGSLQ----H----TLEGHRDWVR 467
Query: 309 ALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVV 368
++ S D +L S + DR++ +W+ ++G++ K L GH+ + ++
Sbjct: 468 SVIFSHDSRLLASASDDRTVRIWDTEKGSH-------------KHTLEGHSSLVTSVSFS 514
Query: 369 --SNLLFSGSSDNTIRIW 384
S LL S S+D T+RIW
Sbjct: 515 HDSRLLASASNDQTVRIW 532
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 53/232 (22%), Positives = 100/232 (43%)
Query: 108 VNITSTDVGDHANVVATGNGDAVKSLVVLGD-KLFSAHQDHKIRVWKIDNNT-SAYYSTS 165
V I T+ G + + G+ D V+S++ D +L ++ D +++W D T S ++
Sbjct: 320 VKIWDTETGSLQHTLE-GHSDLVRSVIFSHDSRLLASASDSTVKIW--DTGTGSLQHTLE 376
Query: 166 GK---LKNKYYERIATL--PTLNDRFTKCFLANNYVQVRRHKKCTWVHHVDTVXXXXXXX 220
G +++ + + L +D K + + +H T H D V
Sbjct: 377 GHRDWVRSVIFSHDSQLLASASDDSTVKIW--DTGTGSLQH---TLEGHRDWVRSVIFSH 431
Query: 221 XXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKV 280
S D T KIW T L+ H D + +++ S + + + S D +++
Sbjct: 432 DSQLLASASDDSTVKIWDTGT-GSLQHTLEGHRDWVRSVIFSHDSR-LLASASDDRTVRI 489
Query: 281 WKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWE 332
W + + KH TLE H S VT+++ S D +L S + D+++ +W+
Sbjct: 490 WDTEKGS----HKH----TLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWD 533
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 60/238 (25%), Positives = 103/238 (43%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQV 290
DRT KIW T + L+ H D + +++ S +D + ++D+ +K+W +LQ
Sbjct: 317 DRTVKIWDT-ETGSLQHTLEGHSDLVRSVIFS--HDSRLLASASDSTVKIWDTGTGSLQ- 372
Query: 291 NKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGN--YIVDGDDDSGH 348
H TLE H+ V ++ S D +L S + D ++ +W+ G+ + ++G D
Sbjct: 373 ---H----TLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDW-- 423
Query: 349 MVLKGALRGHTKAILCLAVVSNLLF-----SGSSDNTI---RIWRRSSSVTDHQKGYSCL 400
++ + H +L A + + +GS +T+ R W RS + H S L
Sbjct: 424 --VRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSV-IFSHD---SRL 477
Query: 401 AVLEGHRRPVKCLTAVVDSDYSNRNSDHSS----TSF-----LVYSGSLDCEIKIWQI 449
R V+ S + + HSS SF L+ S S D ++IW I
Sbjct: 478 LASASDDRTVRIWDTEKGS-HKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDI 534
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 68/262 (25%), Positives = 112/262 (42%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYV 196
G L + +D +IRVW I T + SG ++ Y A N R+ + V
Sbjct: 328 GKYLATGAEDKQIRVWDIATRTIKHIF-SGHEQDIYSLDFAG----NGRYIASGSGDKTV 382
Query: 197 QVR--RHKKCTWVHHV-DTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKN--A 251
++ K + + D V S D+T ++W T+ +E ++N
Sbjct: 383 RLWDIAEGKLVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDG 442
Query: 252 HDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVN---KKHSLVQTLEKHKSAVT 308
H D++ ++ + + V +GS D IK+W+ Q N K +T E HK V
Sbjct: 443 HKDSVYSVAFAPNGKELV-SGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVL 501
Query: 309 ALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAV- 367
++ L+ DG + SG+ DR + W+ GN M+L+G H +++ +A
Sbjct: 502 SVCLTPDGHWVMSGSKDRGVQFWDPITGN---------AQMMLQG----HKNSVISVAPS 548
Query: 368 -VSNLLFSGSSDNTIRIWRRSS 388
NL +GS D RIWR S+
Sbjct: 549 PTGNLFATGSGDMRARIWRYSA 570
Score = 149 (57.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 50/191 (26%), Positives = 91/191 (47%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQV 290
D+ ++W + R ++ + + H+ I ++ + N ++ +GS D +++W +
Sbjct: 337 DKQIRVWDIAT-RTIKHIFSGHEQDIYSLDFA-GNGRYIASGSGDKTVRLWD-----IAE 389
Query: 291 NKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMV 350
K LV TL + VT +A+S DG + +G+ D+++ VW+ G Y+V+ ++
Sbjct: 390 GK---LVYTLSI-EDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTG-YLVERLENPD--- 441
Query: 351 LKGALRGHTKAILCLAVVSN--LLFSGSSDNTIRIWRRSSSVTDHQ---KGYSCLAVLEG 405
GH ++ +A N L SGS D TI++W + + KG C EG
Sbjct: 442 ------GHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEG 495
Query: 406 HRRPVK--CLT 414
H+ V CLT
Sbjct: 496 HKDFVLSVCLT 506
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 144 (55.7 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 67/280 (23%), Positives = 120/280 (42%)
Query: 124 TGNGDA-VKSLVVLGD-KLFSAHQDHK-IRVWKIDNNTSAYYSTSGKLKNKYYERIATLP 180
T +GD ++S+ D KL + + K IR+W D +T + Y + P
Sbjct: 251 TASGDLYIRSVCFSPDGKLLATGAEDKLIRIW--DLSTKRIIKILRGHEQDIYS-LDFFP 307
Query: 181 TLNDRFTKCFLANNYVQV--RRHKKCTWVHHV-DTVXXXXXXXXXXXXXXTSWDRTFKIW 237
DR + V++ R +C+ + D V S DRT ++W
Sbjct: 308 D-GDRLVSGS-GDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVW 365
Query: 238 -RTSDFRC--LESVK---NAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVN 291
T+ F L+S N H+D++ ++ S + + + +GS D +K+W L + +
Sbjct: 366 DSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQ-IASGSLDRTVKLWH-LEG--KSD 421
Query: 292 KKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVL 351
KK + T HK V ++ + D + SG+ DR ++ W++ GN ++
Sbjct: 422 KKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLL----------- 470
Query: 352 KGALRGHTKAILCLAVVSN------LLFSGSSDNTIRIWR 385
L+GH +++ +AV N + +GS D RIW+
Sbjct: 471 --MLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWK 508
Score = 142 (55.0 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 49/194 (25%), Positives = 87/194 (44%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDG-FVYTGSADTKIKVWKKLRAA 287
S DR+ +IW +C S+ + +D + + VS DG + GS D ++VW
Sbjct: 316 SGDRSVRIWDLRTSQC--SLTLSIEDGVTTVAVSP--DGKLIAAGSLDRTVRVWDSTTGF 371
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSG 347
L V + S + H+ +V ++A S +G + SG+ DR++ +W ++G D
Sbjct: 372 L-VERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWH-------LEGKSDK- 422
Query: 348 HMVLKGALRGHTKAIL--CLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEG 405
+ GH +L C + + SGS D + W ++S + L +L+G
Sbjct: 423 KSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASG--------NPLLMLQG 474
Query: 406 HRRPVKCLTAVVDS 419
HR V + ++S
Sbjct: 475 HRNSVISVAVSLNS 488
Score = 58 (25.5 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 21/80 (26%), Positives = 34/80 (42%)
Query: 77 YIPSLAIA--GKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLV 134
YI S+ + GKLL G+ + IR W+ + I G ++ + D
Sbjct: 257 YIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILR---GHEQDIYSL---DFFPD-- 308
Query: 135 VLGDKLFSAHQDHKIRVWKI 154
GD+L S D +R+W +
Sbjct: 309 --GDRLVSGSGDRSVRIWDL 326
Score = 50 (22.7 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 400 LAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQ 448
L +L+GHR V ++ V + NS T + +GS DC+ +IW+
Sbjct: 469 LLMLQGHRNSV--ISVAV-----SLNS--KGTEGIFATGSGDCKARIWK 508
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 144 (55.7 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 67/280 (23%), Positives = 120/280 (42%)
Query: 124 TGNGDA-VKSLVVLGD-KLFSAHQDHK-IRVWKIDNNTSAYYSTSGKLKNKYYERIATLP 180
T +GD ++S+ D KL + + K IR+W D +T + Y + P
Sbjct: 251 TASGDLYIRSVCFSPDGKLLATGAEDKLIRIW--DLSTKRIIKILRGHEQDIYS-LDFFP 307
Query: 181 TLNDRFTKCFLANNYVQV--RRHKKCTWVHHV-DTVXXXXXXXXXXXXXXTSWDRTFKIW 237
DR + V++ R +C+ + D V S DRT ++W
Sbjct: 308 D-GDRLVSGS-GDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVW 365
Query: 238 -RTSDFRC--LESVK---NAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVN 291
T+ F L+S N H+D++ ++ S + + + +GS D +K+W L + +
Sbjct: 366 DSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQ-IASGSLDRTVKLWH-LEG--KSD 421
Query: 292 KKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVL 351
KK + T HK V ++ + D + SG+ DR ++ W++ GN ++
Sbjct: 422 KKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLL----------- 470
Query: 352 KGALRGHTKAILCLAVVSN------LLFSGSSDNTIRIWR 385
L+GH +++ +AV N + +GS D RIW+
Sbjct: 471 --MLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIWK 508
Score = 142 (55.0 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 49/194 (25%), Positives = 87/194 (44%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDG-FVYTGSADTKIKVWKKLRAA 287
S DR+ +IW +C S+ + +D + + VS DG + GS D ++VW
Sbjct: 316 SGDRSVRIWDLRTSQC--SLTLSIEDGVTTVAVSP--DGKLIAAGSLDRTVRVWDSTTGF 371
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSG 347
L V + S + H+ +V ++A S +G + SG+ DR++ +W ++G D
Sbjct: 372 L-VERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWH-------LEGKSDK- 422
Query: 348 HMVLKGALRGHTKAIL--CLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEG 405
+ GH +L C + + SGS D + W ++S + L +L+G
Sbjct: 423 KSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASG--------NPLLMLQG 474
Query: 406 HRRPVKCLTAVVDS 419
HR V + ++S
Sbjct: 475 HRNSVISVAVSLNS 488
Score = 58 (25.5 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 21/80 (26%), Positives = 34/80 (42%)
Query: 77 YIPSLAIA--GKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLV 134
YI S+ + GKLL G+ + IR W+ + I G ++ + D
Sbjct: 257 YIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILR---GHEQDIYSL---DFFPD-- 308
Query: 135 VLGDKLFSAHQDHKIRVWKI 154
GD+L S D +R+W +
Sbjct: 309 --GDRLVSGSGDRSVRIWDL 326
Score = 50 (22.7 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 400 LAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQ 448
L +L+GHR V ++ V + NS T + +GS DC+ +IW+
Sbjct: 469 LLMLQGHRNSV--ISVAV-----SLNS--KGTEGIFATGSGDCKARIWK 508
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 159 (61.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 64/207 (30%), Positives = 87/207 (42%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTK--IKVW-K 282
D T KIW D+ C + + N +++S S+D V +T IK
Sbjct: 241 DNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLIH 300
Query: 283 KLRAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
A L + + ++ T K +S AV + D T+ R +LV R N +VD
Sbjct: 301 HCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITI-------RRVLVGHRAAVN-VVD 352
Query: 342 GDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRR 386
DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 353 FDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDI 412
Query: 387 SSSVTDHQKGYSCLAVLEGHRRPVKCL 413
S V CL VLEGH V+C+
Sbjct: 413 HSGV--------CLRVLEGHEELVRCI 431
Score = 55 (24.4 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 399 CLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
CL VLEGH V+C+ + + + SG+ D +IK+W ++
Sbjct: 417 CLRVLEGHEELVRCIR------FDEKR---------IVSGAYDGKIKVWDLQ 453
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 159 (61.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 64/207 (30%), Positives = 87/207 (42%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTK--IKVW-K 282
D T KIW D+ C + + N +++S S+D V +T IK
Sbjct: 241 DNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLIH 300
Query: 283 KLRAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
A L + + ++ T K +S AV + D T+ R +LV R N +VD
Sbjct: 301 HCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITI-------RRVLVGHRAAVN-VVD 352
Query: 342 GDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRR 386
DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 353 FDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDI 412
Query: 387 SSSVTDHQKGYSCLAVLEGHRRPVKCL 413
S V CL VLEGH V+C+
Sbjct: 413 HSGV--------CLRVLEGHEELVRCI 431
Score = 55 (24.4 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 399 CLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
CL VLEGH V+C+ + + + SG+ D +IK+W ++
Sbjct: 417 CLRVLEGHEELVRCIR------FDEKR---------IVSGAYDGKIKVWDLQ 453
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 149 (57.5 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 62/207 (29%), Positives = 89/207 (42%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTKIKVWKKLR 285
D T KIW S C + + ++++ S+D V +T + +
Sbjct: 223 DNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIH 282
Query: 286 ---AALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
A L + + ++ T K +S AV +A TD T+ R +LV R N +VD
Sbjct: 283 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITL-------RRVLVGHRAAVN-VVD 334
Query: 342 GDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRR 386
DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 335 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-- 392
Query: 387 SSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 393 -----DIECG-ACLRVLEGHEELVRCI 413
Score = 105 (42.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+HSL + + +++ L D + SG D +I +W D + K
Sbjct: 191 RHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIW-------------DKSTLECK 237
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
L GHT ++LCL ++ +GSSD+T+R+W ++ + + C AVL
Sbjct: 238 RILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL 288
Score = 61 (26.5 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
+CL VLEGH V+C+ + N+ + SG+ D +IK+W +
Sbjct: 398 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDL 434
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 149 (57.5 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 62/207 (29%), Positives = 89/207 (42%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTKIKVWKKLR 285
D T KIW S C + + ++++ S+D V +T + +
Sbjct: 286 DNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIH 345
Query: 286 ---AALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
A L + + ++ T K +S AV +A TD T+ R +LV R N +VD
Sbjct: 346 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITL-------RRVLVGHRAAVN-VVD 397
Query: 342 GDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRR 386
DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 398 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-- 455
Query: 387 SSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 456 -----DIECG-ACLRVLEGHEELVRCI 476
Score = 105 (42.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+HSL + + +++ L D + SG D +I +W D + K
Sbjct: 254 RHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIW-------------DKSTLECK 300
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
L GHT ++LCL ++ +GSSD+T+R+W ++ + + C AVL
Sbjct: 301 RILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL 351
Score = 61 (26.5 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
+CL VLEGH V+C+ + N+ + SG+ D +IK+W +
Sbjct: 461 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDL 497
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 130 (50.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 37/119 (31%), Positives = 56/119 (47%)
Query: 299 TLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGH 358
TL+ H VT + + GT LYSG+ D++I VW + LRGH
Sbjct: 617 TLKGHTKWVTTICIL--GTNLYSGSYDKTIRVWNLKS-------------LECSATLRGH 661
Query: 359 TKAILCLAVVSNLLFSGSSDNTIRIW-----RRSSSVTDHQKGYSCLAVLEGHRRPVKC 412
+ + + + LLF+ S DNTI+IW R ++++ H CLAV E + + C
Sbjct: 662 DRWVEHMVICDKLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISC 720
Score = 130 (50.8 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 40/115 (34%), Positives = 56/115 (48%)
Query: 299 TLEKHKSAVTALALSTDGTVLYSGACDRSILVWERD--QGNYIVDGDDDSGHMVLKGALR 356
TLE H AV L +S G L+SG+ D++I VW+ + NY L+
Sbjct: 577 TLESHARAVKTLCIS--GQYLFSGSNDKTIKVWDLKTFRCNY---------------TLK 619
Query: 357 GHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVK 411
GHTK + + ++ L+SGS D TIR+W + K C A L GH R V+
Sbjct: 620 GHTKWVTTICILGTNLYSGSYDKTIRVW--------NLKSLECSATLRGHDRWVE 666
Score = 118 (46.6 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 49/203 (24%), Positives = 81/203 (39%)
Query: 81 LAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVLGDKL 140
L I LL+ G S+ IR ++ N + T G+ V+S+ L
Sbjct: 466 LCICDNLLFTGCSDNSIRVYDYKSQN-MECVQT---------LKGHEGPVESICYNDQYL 515
Query: 141 FSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYVQVRR 200
FS DH I+VW + ++ G K + T+ LND++ ++ ++V
Sbjct: 516 FSGSSDHSIKVWDL-KKLRCIFTLEGHDKP-----VHTV-LLNDKYLFSGSSDKTIKVWD 568
Query: 201 HK--KCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINA 258
K +C + S D+T K+W FRC ++K H +
Sbjct: 569 LKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKG-HTKWVTT 627
Query: 259 IVVSKSNDGFVYTGSADTKIKVW 281
I + +N +Y+GS D I+VW
Sbjct: 628 ICILGTN---LYSGSYDKTIRVW 647
Score = 115 (45.5 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 31/103 (30%), Positives = 50/103 (48%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S+D+T ++W C +++ HD + +V+ D ++T S D IK+W L
Sbjct: 639 SYDKTIRVWNLKSLECSATLRG-HDRWVEHMVIC---DKLLFTASDDNTIKIWDL--ETL 692
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVW 331
+ N TLE H + V LA+ D + S + D+SI VW
Sbjct: 693 RCNT------TLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 97 (39.2 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 355 LRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLT 414
LRGH + + + + LLF+ S DNTI+IW + C LEGH V+CL
Sbjct: 658 LRGHDRWVEHMVICDKLLFTASDDNTIKIWDLET--------LRCNTTLEGHNATVQCLA 709
Query: 415 AVVD 418
D
Sbjct: 710 VWED 713
Score = 69 (29.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 28/92 (30%), Positives = 41/92 (44%)
Query: 64 QCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVA 123
+C TLK G+ + S+ + L+ GSS+ I+ W+ + T G H V
Sbjct: 493 ECVQTLK--GHEGPVESICYNDQYLFSGSSDHSIKVWDLKK---LRCIFTLEG-HDKPVH 546
Query: 124 TGNGDAVKSLVVLGDK-LFSAHQDHKIRVWKI 154
T V+L DK LFS D I+VW +
Sbjct: 547 T---------VLLNDKYLFSGSSDKTIKVWDL 569
Score = 47 (21.6 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 435 VYSGSLDCEIKIWQIR 450
+YSGS D I++W ++
Sbjct: 635 LYSGSYDKTIRVWNLK 650
Score = 39 (18.8 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 12/54 (22%), Positives = 29/54 (53%)
Query: 234 FKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYT---GSADTKIKVWKKL 284
FK+W + + +E + +D ++AI ++G ++ G++ T +++ K L
Sbjct: 3 FKVWFSYEDEEVELSELTNDTTVSAIR-KILHEGKIFRFPYGTSQTDLQIGKML 55
Score = 37 (18.1 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 434 LVYSGSLDCEIKIWQI 449
L+++ S D IKIW +
Sbjct: 674 LLFTASDDNTIKIWDL 689
Score = 37 (18.1 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 17/73 (23%), Positives = 32/73 (43%)
Query: 101 NRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVL--GDKLFSAHQDHKIRVWKIDNNT 158
N + NN N + + +++N N KSLV + G K + +D R + N+
Sbjct: 356 NNNNNNNNNNNNNNNNNNSNNNNNNNSSISKSLVEISSGSKERN-DRDSPSRQLFVSNDG 414
Query: 159 SAYYSTSGKLKNK 171
+ + + K+K
Sbjct: 415 NTLNTNKERSKSK 427
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 147 (56.8 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 62/207 (29%), Positives = 89/207 (42%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFV--YTGSADTKIKVW-K 282
D T KIW S C + + ++++ S+D V + +A +
Sbjct: 223 DNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIH 282
Query: 283 KLRAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
A L + + ++ T K +S AV +A TD T+ R +LV R N +VD
Sbjct: 283 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITL-------RRVLVGHRAAVN-VVD 334
Query: 342 GDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRR 386
DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 335 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-- 392
Query: 387 SSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 393 -----DIECG-ACLRVLEGHEELVRCI 413
Score = 105 (42.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+HSL + + +++ L D + SG D +I +W D + K
Sbjct: 191 RHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIW-------------DKSTLECK 237
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
L GHT ++LCL ++ +GSSD+T+R+W ++ + + C AVL
Sbjct: 238 RILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVL 288
Score = 61 (26.5 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
+CL VLEGH V+C+ + N+ + SG+ D +IK+W +
Sbjct: 398 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDL 434
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 149 (57.5 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 62/207 (29%), Positives = 89/207 (42%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTKIKVWKKLR 285
D T KIW S C + + ++++ S+D V +T + +
Sbjct: 322 DNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIH 381
Query: 286 ---AALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
A L + + ++ T K +S AV +A TD T+ R +LV R N +VD
Sbjct: 382 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITL-------RRVLVGHRAAVN-VVD 433
Query: 342 GDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRR 386
DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 434 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-- 491
Query: 387 SSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 492 -----DIECG-ACLRVLEGHEELVRCI 512
Score = 105 (42.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+HSL + + +++ L D + SG D +I +W D + K
Sbjct: 290 RHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIW-------------DKSTLECK 336
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
L GHT ++LCL ++ +GSSD+T+R+W ++ + + C AVL
Sbjct: 337 RILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL 387
Score = 61 (26.5 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
+CL VLEGH V+C+ + N+ + SG+ D +IK+W +
Sbjct: 497 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDL 533
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 146 (56.5 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 62/207 (29%), Positives = 90/207 (43%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYT---GSADTKIKVWK 282
D + KIW CL+ + + ++V+ S+D V S + +
Sbjct: 244 DNSIKIWDKQSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVSSGEVLNTLIH 303
Query: 283 KLRAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
A L + + L+ T K +S AV +A +TD ++ R +LV R N +VD
Sbjct: 304 HNEAVLHLRFCNGLMVTCSKDRSIAVWDMASATDISL-------RRVLVGHRAAVN-VVD 355
Query: 342 GDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRR 386
DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 356 FDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-- 413
Query: 387 SSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 414 -----DIECG-ACLRVLEGHEELVRCI 434
Score = 101 (40.6 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+H+L + + +++ L D + SG D SI +W++ LK
Sbjct: 212 RHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKQSLE------------CLK 259
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSS 388
L GHT ++LCL ++ +GSSD+T+R+W SS
Sbjct: 260 -VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVSS 294
Score = 62 (26.9 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+CL VLEGH V+C+ + N+ + SG+ D +IK+W ++
Sbjct: 419 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDLQ 456
>DICTYBASE|DDB_G0286735 [details] [associations]
symbol:DDB_G0286735 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 dictyBase:DDB_G0286735 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000089
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 KO:K10646
RefSeq:XP_637649.1 ProteinModelPortal:Q54LB2
EnsemblProtists:DDB0187121 GeneID:8625789 KEGG:ddi:DDB_G0286735
InParanoid:Q54LB2 OMA:NTNIMIC ProtClustDB:CLSZ2430092
Uniprot:Q54LB2
Length = 694
Score = 130 (50.8 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 65/236 (27%), Positives = 111/236 (47%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S D+T ++W F CL +++ D+ + A+V++ G++++GS IKVW L
Sbjct: 489 SSDQTIRVWDLETFECLSVLRD--DNTVCALVIAA---GYLFSGSFQ-HIKVWD-----L 537
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
+ VQTL+ + V AL +S G LYSGA + + VW D N+
Sbjct: 538 ET---FECVQTLKGNSHWVRALTVS--GGYLYSGAYN-VVRVW--DLANF---------E 580
Query: 349 MVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSS-SVTDHQKGYS----CLAVL 403
V + G + +I LAV + L +G+ +NTI +W + + + +G+ LAV
Sbjct: 581 CVQ--TIPGGSGSIYSLAVSNRRLLAGTYENTIVVWNLDTFEIINKLEGHIGAVYTLAVS 638
Query: 404 E------GHRRPVKCLT-AVVDSDYSNRNSDHSST----SFLVYSGSLDCEIKIWQ 448
+ + +K ++V NR++ + S V+SGS D IK+W+
Sbjct: 639 DKKFYSGSYDSTIKVWNDSLVCVQTLNRHTSSVESIVVSSGCVFSGSADNSIKVWK 694
Score = 82 (33.9 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 24/92 (26%), Positives = 44/92 (47%)
Query: 64 QCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVA 123
+C T G++ I + + +L GSS+ +++ W+ V + V
Sbjct: 423 KCKGTFV--GHNGPIWCMTVTNGMLISGSSDMKVKIWD-----LVTLKCKQV-------L 468
Query: 124 TGNGDAVKSLVVLGDKLFSAHQDHKIRVWKID 155
+G+ V +L V+G++LFS D IRVW ++
Sbjct: 469 SGHEGIVHTLAVIGNRLFSGSSDQTIRVWDLE 500
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 147 (56.8 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 62/207 (29%), Positives = 89/207 (42%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFV--YTGSADTKIKVW-K 282
D T KIW S C + + ++++ S+D V + +A +
Sbjct: 322 DNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIH 381
Query: 283 KLRAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
A L + + ++ T K +S AV +A TD T+ R +LV R N +VD
Sbjct: 382 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITL-------RRVLVGHRAAVN-VVD 433
Query: 342 GDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRR 386
DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 434 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-- 491
Query: 387 SSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 492 -----DIECG-ACLRVLEGHEELVRCI 512
Score = 105 (42.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+HSL + + +++ L D + SG D +I +W D + K
Sbjct: 290 RHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIW-------------DKSTLECK 336
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
L GHT ++LCL ++ +GSSD+T+R+W ++ + + C AVL
Sbjct: 337 RILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVL 387
Score = 61 (26.5 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
+CL VLEGH V+C+ + N+ + SG+ D +IK+W +
Sbjct: 497 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDL 533
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 147 (56.8 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 62/207 (29%), Positives = 89/207 (42%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFV--YTGSADTKIKVW-K 282
D T KIW S C + + ++++ S+D V + +A +
Sbjct: 322 DNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIH 381
Query: 283 KLRAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
A L + + ++ T K +S AV +A TD T+ R +LV R N +VD
Sbjct: 382 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITL-------RRVLVGHRAAVN-VVD 433
Query: 342 GDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRR 386
DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 434 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-- 491
Query: 387 SSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 492 -----DIECG-ACLRVLEGHEELVRCI 512
Score = 105 (42.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+HSL + + +++ L D + SG D +I +W D + K
Sbjct: 290 RHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIW-------------DKSTLECK 336
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
L GHT ++LCL ++ +GSSD+T+R+W ++ + + C AVL
Sbjct: 337 RILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVL 387
Score = 61 (26.5 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
+CL VLEGH V+C+ + N+ + SG+ D +IK+W +
Sbjct: 497 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDL 533
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 146 (56.5 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 61/207 (29%), Positives = 89/207 (42%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTKIKVWKKLR 285
D T KIW + C + + ++++ S+D V +T + +
Sbjct: 281 DNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIH 340
Query: 286 ---AALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
A L + + ++ T K +S AV +A TD T+ R +LV R N +VD
Sbjct: 341 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITL-------RRVLVGHRAAVN-VVD 392
Query: 342 GDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRR 386
DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 393 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-- 450
Query: 387 SSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 451 -----DIECG-ACLRVLEGHEELVRCI 471
Score = 105 (42.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 29/111 (26%), Positives = 54/111 (48%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+HSL + + +++ L D + SG D +I +W+++ + K
Sbjct: 249 RHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNT-------------LECK 295
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
L GHT ++LCL ++ +GSSD+T+R+W ++ + + C AVL
Sbjct: 296 RILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL 346
Score = 61 (26.5 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
+CL VLEGH V+C+ + N+ + SG+ D +IK+W +
Sbjct: 456 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDL 492
>UNIPROTKB|I3L9L4 [details] [associations]
symbol:STRN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070016 "armadillo repeat domain binding" evidence=IEA]
[GO:0051721 "protein phosphatase 2A binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000159 "protein phosphatase type 2A complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005794
GO:GO:0005654 GO:GO:0000159 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003700 GO:GO:0000122
GeneTree:ENSGT00520000055597 Ensembl:ENSSSCT00000031432
Uniprot:I3L9L4
Length = 271
Score = 155 (59.6 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 47/140 (33%), Positives = 65/140 (46%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEKHKSA 306
+H D + A+ V T S D +K+W L+ + K SL + T H
Sbjct: 103 SHFDGVRALAFHPVEPVLV-TASEDHTLKLWN-LQKTVPAKKSASLDVEPIYTFRAHIGP 160
Query: 307 VTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLA 366
V +LA+S++G +SG D +I W N VD D VL G L HT A+ LA
Sbjct: 161 VLSLAISSNGEQCFSGGIDATIQWWNMPSPN--VDPYDTYEPNVLAGTLVAHTDAVWGLA 218
Query: 367 V--VSNLLFSGSSDNTIRIW 384
+ N L S S+D TIR+W
Sbjct: 219 YSGIKNQLLSCSADGTIRLW 238
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 146 (56.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 61/207 (29%), Positives = 89/207 (42%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTKIKVWKKLR 285
D T KIW + C + + ++++ S+D V +T + +
Sbjct: 322 DNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIH 381
Query: 286 ---AALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
A L + + ++ T K +S AV +A TD T+ R +LV R N +VD
Sbjct: 382 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITL-------RRVLVGHRAAVN-VVD 433
Query: 342 GDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRR 386
DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 434 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-- 491
Query: 387 SSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 492 -----DIECG-ACLRVLEGHEELVRCI 512
Score = 105 (42.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 29/111 (26%), Positives = 54/111 (48%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+HSL + + +++ L D + SG D +I +W+++ + K
Sbjct: 290 RHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNT-------------LECK 336
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
L GHT ++LCL ++ +GSSD+T+R+W ++ + + C AVL
Sbjct: 337 RILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL 387
Score = 61 (26.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
+CL VLEGH V+C+ + N+ + SG+ D +IK+W +
Sbjct: 497 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDL 533
>ZFIN|ZDB-GENE-030131-6622 [details] [associations]
symbol:wdr48 "WD repeat domain 48" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-6622
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 EMBL:BX284666
EMBL:BC057489 IPI:IPI00498668 RefSeq:NP_999874.1 UniGene:Dr.5219
ProteinModelPortal:Q6PFM9 Ensembl:ENSDART00000056248 GeneID:334682
KEGG:dre:334682 InParanoid:Q6PFM9 OMA:IVQCHIL NextBio:20810509
Bgee:Q6PFM9 Uniprot:Q6PFM9
Length = 677
Score = 163 (62.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 56/214 (26%), Positives = 94/214 (43%)
Query: 180 PTLNDRFT--KCFLANNYVQVRRHKKCTWV----HHVDTVXXXXXXXXXXXXXXTSWDRT 233
P LN FT + + + V +HK+ ++ HH D V S D T
Sbjct: 40 PALNRLFTAGRDSIIRIW-SVNQHKQDPYIASMEHHTDWVNDIILCCNGKTLISASSDTT 98
Query: 234 FKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK-KLRAALQVNK 292
K+W C+ +++ H D + A+ +K + V + D +I +W AL +
Sbjct: 99 VKVWNAHKGFCMSTLRT-HKDYVKALAYAKDKE-LVASAGLDRQIFLWDVNTLTALTASN 156
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+L +K ++ +LA++ GTV+ SG+ ++ + VW D + ++K
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQTGTVIISGSTEKVLRVW-----------DPRTCAKLMK 205
Query: 353 GALRGHTKAI--LCLAVVSNLLFSGSSDNTIRIW 384
L+GHT + L L SGSSD TIR+W
Sbjct: 206 --LKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLW 237
Score = 139 (54.0 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 50/195 (25%), Positives = 91/195 (46%)
Query: 231 DRTFKIWRTSDFR---CLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
D +IW + + + S+++ H D +N I++ N + + S+DT +KVW
Sbjct: 51 DSIIRIWSVNQHKQDPYIASMEH-HTDWVNDIILC-CNGKTLISASSDTTVKVWNA---- 104
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSG 347
K + TL HK V ALA + D ++ S DR I +W+ + + S
Sbjct: 105 ----HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA----SN 156
Query: 348 HMVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWR-RSSSVTDHQKGYSC-LAVL 403
+ V +L G+ +I LA+ ++ SGS++ +R+W R+ + KG++ + L
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQTGTVIISGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSL 216
Query: 404 EGHRRPVKCLTAVVD 418
+R +CL+ D
Sbjct: 217 LLNRDGTQCLSGSSD 231
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 143 (55.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 63/208 (30%), Positives = 91/208 (43%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTKIKVWKKL- 284
D + KIW CL+ + + ++V+ S+D V ++ +V L
Sbjct: 244 DNSIKIWDKQTLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNSG-EVLNTLI 302
Query: 285 ---RAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIV 340
A L + + L+ T K +S AV +A TD ++ R +LV R N +V
Sbjct: 303 HHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISL-------RRVLVGHRAAVN-VV 354
Query: 341 DGDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWR 385
D DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 355 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW- 413
Query: 386 RSSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 414 ------DIECG-ACLRVLEGHEELVRCI 434
Score = 62 (26.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+CL VLEGH V+C+ + N+ + SG+ D +IK+W ++
Sbjct: 419 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDLQ 456
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 149 (57.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 56/200 (28%), Positives = 92/200 (46%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFVYTGSADTKIKVWKKLR 285
D T KIW +D +C++++ + + +++S S+D V +T V +
Sbjct: 229 DNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIH 288
Query: 286 ---AALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSIL-VWERDQGNYIV 340
A L + + ++ T K +S AV + ++ T+ R+ + V + D+ YIV
Sbjct: 289 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDE-KYIV 347
Query: 341 DGDDDSGHMVLKGA-------LRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDH 393
D V + L GH + I CL L+ SGSSDN+IR+W D
Sbjct: 348 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLW-------DI 400
Query: 394 QKGYSCLAVLEGHRRPVKCL 413
+ G +CL VLEGH V+C+
Sbjct: 401 ECG-ACLRVLEGHEELVRCI 419
Score = 102 (41.0 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 34/105 (32%), Positives = 49/105 (46%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK-KLRAA 287
S DRT K+W TS + ++ N H I + + D V +GS+D I++W + A
Sbjct: 350 SGDRTIKVWSTSTCEFVRTL-NGHKRGIACL---QYRDRLVVSGSSDNSIRLWDIECGAC 405
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWE 332
L+V LE H+ V + T V SGA D I VW+
Sbjct: 406 LRV---------LEGHEELVRCIRFDTKRIV--SGAYDGKIKVWD 439
Score = 59 (25.8 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 64 QCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVN 109
QC TL G++ + L K++ GSS+ +R W+ + VN
Sbjct: 241 QCVKTLM--GHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVN 284
Score = 55 (24.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
+CL VLEGH V+C+ + + + SG+ D +IK+W +
Sbjct: 404 ACLRVLEGHEELVRCIR------FDTKR---------IVSGAYDGKIKVWDL 440
>UNIPROTKB|Q5F3K4 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9031
"Gallus gallus" [GO:0005764 "lysosome" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W EMBL:AJ851646
IPI:IPI00571490 RefSeq:NP_001026135.1 UniGene:Gga.3234
ProteinModelPortal:Q5F3K4 STRING:Q5F3K4 Ensembl:ENSGALT00000031283
GeneID:420427 KEGG:gga:420427 GeneTree:ENSGT00520000055738
HOVERGEN:HBG079413 InParanoid:Q5F3K4 OMA:NRLYSAG NextBio:20823337
Uniprot:Q5F3K4
Length = 678
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 58/215 (26%), Positives = 97/215 (45%)
Query: 180 PTLNDRFT--KCFLANNYVQVRRHKKCTWV----HHVDTVXXXXXXXXXXXXXXTSWDRT 233
P LN FT + + + V +HK+ ++ HH D V S D T
Sbjct: 40 PALNRLFTAGRDSIIRIW-SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTT 98
Query: 234 FKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK-KLRAALQVNK 292
K+W C+ +++ H D + A+ +K + V + D +I +W AL +
Sbjct: 99 VKVWNAHKGFCMSTLRT-HKDYVKALAYAKDKE-LVASAGLDRQIFLWDVNTLTALTASN 156
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+L +K ++ +LA++ GTV+ SG+ ++ + VW D + ++K
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVW-----------DPRTCAKLMK 205
Query: 353 GALRGHT---KAILCLAVVSNLLFSGSSDNTIRIW 384
L+GHT KA+L + L SGSSD TIR+W
Sbjct: 206 --LKGHTDNVKALLLNRDGTQCL-SGSSDGTIRLW 237
Score = 142 (55.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 231 DRTFKIWRTSDFR---CLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
D +IW + + + S+++ H D +N IV+ N + + S+DT +KVW
Sbjct: 51 DSIIRIWSVNQHKQDPYIASMEH-HTDWVNDIVLC-CNGKTLISASSDTTVKVWNA---- 104
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSG 347
K + TL HK V ALA + D ++ S DR I +W+ + + S
Sbjct: 105 ----HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA----SN 156
Query: 348 HMVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWR-RSSSVTDHQKGYSC-LAVL 403
+ V +L G+ +I LA+ + ++ SGS++ +R+W R+ + KG++ + L
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKAL 216
Query: 404 EGHRRPVKCLTAVVD 418
+R +CL+ D
Sbjct: 217 LLNRDGTQCLSGSSD 231
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 144 (55.7 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 61/207 (29%), Positives = 89/207 (42%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAI-----NAIVVSKSNDGFV--YTGSADTKIKVW-K 282
D T KIW + C + + ++++ S+D V + +A +
Sbjct: 322 DNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIH 381
Query: 283 KLRAALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
A L + + ++ T K +S AV +A TD T+ R +LV R N +VD
Sbjct: 382 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITL-------RRVLVGHRAAVN-VVD 433
Query: 342 GDDD-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRR 386
DD SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 434 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-- 491
Query: 387 SSSVTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 492 -----DIECG-ACLRVLEGHEELVRCI 512
Score = 105 (42.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 29/111 (26%), Positives = 54/111 (48%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+HSL + + +++ L D + SG D +I +W+++ + K
Sbjct: 290 RHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNT-------------LECK 336
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
L GHT ++LCL ++ +GSSD+T+R+W ++ + + C AVL
Sbjct: 337 RILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVL 387
Score = 61 (26.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 398 SCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
+CL VLEGH V+C+ + N+ + SG+ D +IK+W +
Sbjct: 497 ACLRVLEGHEELVRCIR------FDNKR---------IVSGAYDGKIKVWDL 533
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 159 (61.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 73/298 (24%), Positives = 120/298 (40%)
Query: 105 NNYVNITSTDVGDHANVVATGNGDAVKSLVVLGDK--LFSAHQDHKIRVWKIDNNTSA-- 160
+N + + G+ V TG+ A++ L V LFS +D+K+ W +++N
Sbjct: 228 DNTIKVWDLASGE-LKVTLTGHVSAIRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQVRN 286
Query: 161 YYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYVQV----RRHKKCTWVHHVDTVXXX 216
YY G + Y +A PTL+ F+ +N V+V R H T+
Sbjct: 287 YY---GHRQGVY--SVALHPTLDVLFSGG--RDNCVRVWDMRTRANIFEMKGHKGTILSL 339
Query: 217 XXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADT 276
S D T K+W + ++ N H + ++V+ + F TG+AD
Sbjct: 340 KSQNADPQVISGSMDTTVKLWDLATGTSAATLTN-HKKGVRSMVIHEKEYSFA-TGAADN 397
Query: 277 KIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQG 336
IK WK S ++ L H S + A+AL+ D VL SG + SI W+ G
Sbjct: 398 -IKQWKC--------PDGSFIKNLSGHNSIINAMALNADN-VLVSGGDNGSISFWDWKTG 447
Query: 337 NYIVDGDDDSGHMVLKGALRGHTKAI-LCLAVVSNLLFSGSSDNTIRIWRRSSSVTDH 393
Y +V G+L G + + L + +D TI+ ++ T +
Sbjct: 448 -YCFQKTQS---IVQPGSLEGEAGIFDMAFDKTGSRLITCEADKTIKFYKEDEDATPY 501
Score = 139 (54.0 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 47/156 (30%), Positives = 69/156 (44%)
Query: 245 LESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHK 304
L V + H + AI V KSN+ F TGS D IKVW L+V TL H
Sbjct: 199 LMRVISGHTGWVRAIAVDKSNEWFA-TGSTDNTIKVWDLASGELKV--------TLTGHV 249
Query: 305 SAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILC 364
SA+ L +S+ L+S D +L W+ + + + GH + +
Sbjct: 250 SAIRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQVRN-------------YYGHRQGVYS 296
Query: 365 LAVVSNL--LFSGSSDNTIRIW-RRSSSVTDHQKGY 397
+A+ L LFSG DN +R+W R+ + KG+
Sbjct: 297 VALHPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGH 332
Score = 131 (51.2 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 50/199 (25%), Positives = 85/199 (42%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S D T K+W + L+ H AI + VS S ++++ D K+ W L
Sbjct: 226 STDNTIKVWDLASGE-LKVTLTGHVSAIRGLEVS-SRHPYLFSVGEDNKVLCWD-----L 278
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWE-RDQGNYIVDGDDDSG 347
+ NK+ V+ H+ V ++AL VL+SG D + VW+ R + N
Sbjct: 279 ESNKQ---VRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIF-------- 327
Query: 348 HMVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIW-----RRSSSVTDHQKGYSCL 400
++GH IL L + SGS D T+++W ++++T+H+KG +
Sbjct: 328 ------EMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKKGVRSM 381
Query: 401 AVLEGHRRPVKCLTAVVDS 419
+ H + T D+
Sbjct: 382 VI---HEKEYSFATGAADN 397
Score = 49 (22.3 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 22/90 (24%), Positives = 37/90 (41%)
Query: 61 SEHQCSATLKVKGNSSYIPSLAIAGKL-LYGGSSNGEIRAWNRDPNNYVNITSTDVGDHA 119
S + + + +K N I +I L LY ++N N + NN N TST +
Sbjct: 12 SNGESTLSQNIKQNIDRIYKSSILNTLKLYNNNNNN-----NNNNNNNNNTTSTTTNTNN 66
Query: 120 NVVATG-NGDAVKSLVVLGDKLFSAHQDHK 148
N + NG+ + L K+ ++ K
Sbjct: 67 NKTSIDDNGEDESKRIKLYSKIKDEYEPVK 96
Score = 46 (21.3 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 435 VYSGSLDCEIKIWQI 449
V SGS+D +K+W +
Sbjct: 348 VISGSMDTTVKLWDL 362
>UNIPROTKB|Q4R2Z6 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9541
"Macaca fascicularis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764
GO:GO:0016579 InterPro:IPR021772 Pfam:PF11816 HOVERGEN:HBG079413
EMBL:AB179472 ProteinModelPortal:Q4R2Z6 PRIDE:Q4R2Z6 Uniprot:Q4R2Z6
Length = 622
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 57/215 (26%), Positives = 97/215 (45%)
Query: 180 PTLNDRFT--KCFLANNYVQVRRHKKCTWV----HHVDTVXXXXXXXXXXXXXXTSWDRT 233
P LN FT + + + V +HK+ ++ HH D V S D T
Sbjct: 40 PALNRLFTAGRDSIIRIW-SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTT 98
Query: 234 FKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK-KLRAALQVNK 292
K+W C+ +++ H D + A+ +K + V + D +I +W AL +
Sbjct: 99 VKVWNAHKGFCMSTLRT-HKDYVKALAYAKDKE-LVASAGLDRQIFLWDVNTLTALTASN 156
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+L +K ++ +LA++ GT++ SG+ ++ + VW D + ++K
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVW-----------DPRTCAKLMK 205
Query: 353 GALRGHT---KAILCLAVVSNLLFSGSSDNTIRIW 384
L+GHT KA+L + L SGSSD TIR+W
Sbjct: 206 --LKGHTDNVKALLLNRDGTQCL-SGSSDGTIRLW 237
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 231 DRTFKIWRTSDFR---CLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
D +IW + + + S+++ H D +N IV+ N + + S+DT +KVW
Sbjct: 51 DSIIRIWSVNQHKQDPYIASMEH-HTDWVNDIVLC-CNGKTLISASSDTTVKVWNA---- 104
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSG 347
K + TL HK V ALA + D ++ S DR I +W+ + + S
Sbjct: 105 ----HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA----SN 156
Query: 348 HMVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWR-RSSSVTDHQKGYSC-LAVL 403
+ V +L G+ +I LA+ + ++ SGS++ +R+W R+ + KG++ + L
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKAL 216
Query: 404 EGHRRPVKCLTAVVD 418
+R +CL+ D
Sbjct: 217 LLNRDGTQCLSGSSD 231
>MGI|MGI:1914811 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1914811 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 UniGene:Mm.473239 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 OMA:NRLYSAG
EMBL:AK122511 EMBL:AK012599 EMBL:AK018396 EMBL:AK030041
EMBL:AK033631 EMBL:AK035273 EMBL:AK035864 EMBL:AK043970
EMBL:BC006679 EMBL:BC048155 EMBL:BC062967 IPI:IPI00336198
IPI:IPI00659186 IPI:IPI00677198 RefSeq:NP_080512.1
ProteinModelPortal:Q8BH57 SMR:Q8BH57 STRING:Q8BH57
PhosphoSite:Q8BH57 PaxDb:Q8BH57 PRIDE:Q8BH57
Ensembl:ENSMUST00000036561 GeneID:67561 KEGG:mmu:67561
UCSC:uc009sbm.1 UCSC:uc009sbn.1 UCSC:uc009sbo.1 InParanoid:Q8BH57
NextBio:324921 Bgee:Q8BH57 CleanEx:MM_WDR48 Genevestigator:Q8BH57
GermOnline:ENSMUSG00000032512 Uniprot:Q8BH57
Length = 676
Score = 160 (61.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 57/215 (26%), Positives = 97/215 (45%)
Query: 180 PTLNDRFT--KCFLANNYVQVRRHKKCTWV----HHVDTVXXXXXXXXXXXXXXTSWDRT 233
P LN FT + + + V +HK+ ++ HH D V S D T
Sbjct: 40 PALNRLFTAGRDSIIRIW-SVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTT 98
Query: 234 FKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK-KLRAALQVNK 292
K+W C+ +++ H D + A+ +K + V + D +I +W AL +
Sbjct: 99 VKVWNAHKGFCMSTLRT-HKDYVKALAYAKDKE-LVASAGLDRQIFLWDVNTLTALTASN 156
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+L +K ++ +LA++ GT++ SG+ ++ + VW D + ++K
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVW-----------DPRTCAKLMK 205
Query: 353 GALRGHT---KAILCLAVVSNLLFSGSSDNTIRIW 384
L+GHT KA+L + L SGSSD TIR+W
Sbjct: 206 --LKGHTDNVKALLLHRDGTQCL-SGSSDGTIRLW 237
Score = 149 (57.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 231 DRTFKIWRTSDFR---CLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
D +IW + + + S+++ H D +N +V+ N + + S+DT +KVW
Sbjct: 51 DSIIRIWSVNQHKQDPYIASMEH-HTDWVNDVVLC-CNGKTLISASSDTTVKVWNA---- 104
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSG 347
K + TL HK V ALA + D ++ S DR I +W+ + + S
Sbjct: 105 ----HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA----SN 156
Query: 348 HMVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWR-RSSSVTDHQKGYSC-LAVL 403
+ V +L G+ +I LA+ + ++ SGS++ +R+W R+ + KG++ + L
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKAL 216
Query: 404 EGHRRPVKCLTAVVD 418
HR +CL+ D
Sbjct: 217 LLHRDGTQCLSGSSD 231
>RGD|1309702 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0016579
"protein deubiquitination" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309702 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 IPI:IPI00914740 RefSeq:NP_001129367.1
UniGene:Rn.8675 PRIDE:D3Z8C7 Ensembl:ENSRNOT00000024172
GeneID:363164 KEGG:rno:363164 UCSC:RGD:1309702 OMA:RYPKENT
NextBio:682684 Uniprot:D3Z8C7
Length = 676
Score = 160 (61.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 57/215 (26%), Positives = 97/215 (45%)
Query: 180 PTLNDRFT--KCFLANNYVQVRRHKKCTWV----HHVDTVXXXXXXXXXXXXXXTSWDRT 233
P LN FT + + + V +HK+ ++ HH D V S D T
Sbjct: 40 PALNRLFTAGRDSIIRIW-SVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTT 98
Query: 234 FKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK-KLRAALQVNK 292
K+W C+ +++ H D + A+ +K + V + D +I +W AL +
Sbjct: 99 VKVWNAHKGFCMSTLRT-HKDYVKALAYAKDKE-LVASAGLDRQIFLWDVNTLTALTASN 156
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+L +K ++ +LA++ GT++ SG+ ++ + VW D + ++K
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVW-----------DPRTCAKLMK 205
Query: 353 GALRGHT---KAILCLAVVSNLLFSGSSDNTIRIW 384
L+GHT KA+L + L SGSSD TIR+W
Sbjct: 206 --LKGHTDNVKALLLHRDGTQCL-SGSSDGTIRLW 237
Score = 149 (57.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 231 DRTFKIWRTSDFR---CLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
D +IW + + + S+++ H D +N +V+ N + + S+DT +KVW
Sbjct: 51 DSIIRIWSVNQHKQDPYIASMEH-HTDWVNDVVLC-CNGKTLISASSDTTVKVWNA---- 104
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSG 347
K + TL HK V ALA + D ++ S DR I +W+ + + S
Sbjct: 105 ----HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA----SN 156
Query: 348 HMVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWR-RSSSVTDHQKGYSC-LAVL 403
+ V +L G+ +I LA+ + ++ SGS++ +R+W R+ + KG++ + L
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKAL 216
Query: 404 EGHRRPVKCLTAVVD 418
HR +CL+ D
Sbjct: 217 LLHRDGTQCLSGSSD 231
>UNIPROTKB|F1MV75 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 InterPro:IPR021772
Pfam:PF11816 IPI:IPI00697548 UniGene:Bt.64382
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:DAAA02053659
EMBL:DAAA02053660 EMBL:DAAA02053661 Ensembl:ENSBTAT00000004876
Uniprot:F1MV75
Length = 677
Score = 160 (61.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 57/215 (26%), Positives = 97/215 (45%)
Query: 180 PTLNDRFT--KCFLANNYVQVRRHKKCTWV----HHVDTVXXXXXXXXXXXXXXTSWDRT 233
P LN FT + + + V +HK+ ++ HH D V S D T
Sbjct: 40 PALNRLFTAGRDSIIRIW-SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTT 98
Query: 234 FKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK-KLRAALQVNK 292
K+W C+ +++ H D + A+ +K + V + D +I +W AL +
Sbjct: 99 VKVWNAHKGFCMSTLRT-HKDYVKALAYAKDKE-LVASAGLDRQIFLWDVNTLTALTASN 156
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+L +K ++ +LA++ GT++ SG+ ++ + VW D + ++K
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVW-----------DPRTCAKLMK 205
Query: 353 GALRGHT---KAILCLAVVSNLLFSGSSDNTIRIW 384
L+GHT KA+L + L SGSSD TIR+W
Sbjct: 206 --LKGHTDNVKALLLNRDGTQCL-SGSSDGTIRLW 237
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 231 DRTFKIWRTSDFR---CLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
D +IW + + + S+++ H D +N IV+ N + + S+DT +KVW
Sbjct: 51 DSIIRIWSVNQHKQDPYIASMEH-HTDWVNDIVLC-CNGKTLISASSDTTVKVWNA---- 104
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSG 347
K + TL HK V ALA + D ++ S DR I +W+ + + S
Sbjct: 105 ----HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA----SN 156
Query: 348 HMVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWR-RSSSVTDHQKGYSC-LAVL 403
+ V +L G+ +I LA+ + ++ SGS++ +R+W R+ + KG++ + L
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKAL 216
Query: 404 EGHRRPVKCLTAVVD 418
+R +CL+ D
Sbjct: 217 LLNRDGTQCLSGSSD 231
>UNIPROTKB|Q32PG3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005764 "lysosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 HSSP:P63005 EMBL:BC108126
IPI:IPI00697548 RefSeq:NP_001069992.1 UniGene:Bt.64382
ProteinModelPortal:Q32PG3 STRING:Q32PG3 GeneID:618860
KEGG:bta:618860 CTD:57599 HOGENOM:HOG000007343 InParanoid:Q32PG3
OrthoDB:EOG4HHP1W NextBio:20901375 Uniprot:Q32PG3
Length = 677
Score = 160 (61.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 57/215 (26%), Positives = 97/215 (45%)
Query: 180 PTLNDRFT--KCFLANNYVQVRRHKKCTWV----HHVDTVXXXXXXXXXXXXXXTSWDRT 233
P LN FT + + + V +HK+ ++ HH D V S D T
Sbjct: 40 PALNRLFTAGRDSIIRIW-SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTT 98
Query: 234 FKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK-KLRAALQVNK 292
K+W C+ +++ H D + A+ +K + V + D +I +W AL +
Sbjct: 99 VKVWNAHKGFCMSTLRT-HKDYVKALAYAKDKE-LVASAGLDRQIFLWDVNTLTALTASN 156
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+L +K ++ +LA++ GT++ SG+ ++ + VW D + ++K
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVW-----------DPRTCAKLMK 205
Query: 353 GALRGHT---KAILCLAVVSNLLFSGSSDNTIRIW 384
L+GHT KA+L + L SGSSD TIR+W
Sbjct: 206 --LKGHTDNVKALLLNRDGTQCL-SGSSDGTIRLW 237
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 231 DRTFKIWRTSDFR---CLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
D +IW + + + S+++ H D +N IV+ N + + S+DT +KVW
Sbjct: 51 DSIIRIWSVNQHKQDPYIASMEH-HTDWVNDIVLC-CNGKTLISASSDTTVKVWNA---- 104
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSG 347
K + TL HK V ALA + D ++ S DR I +W+ + + S
Sbjct: 105 ----HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA----SN 156
Query: 348 HMVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWR-RSSSVTDHQKGYSC-LAVL 403
+ V +L G+ +I LA+ + ++ SGS++ +R+W R+ + KG++ + L
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKAL 216
Query: 404 EGHRRPVKCLTAVVD 418
+R +CL+ D
Sbjct: 217 LLNRDGTQCLSGSSD 231
>UNIPROTKB|E2RJ50 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:AAEX03013494
RefSeq:XP_860103.1 ProteinModelPortal:E2RJ50 SMR:E2RJ50
PRIDE:E2RJ50 Ensembl:ENSCAFT00000008168 GeneID:477027
KEGG:cfa:477027 NextBio:20852578 Uniprot:E2RJ50
Length = 677
Score = 160 (61.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 57/215 (26%), Positives = 97/215 (45%)
Query: 180 PTLNDRFT--KCFLANNYVQVRRHKKCTWV----HHVDTVXXXXXXXXXXXXXXTSWDRT 233
P LN FT + + + V +HK+ ++ HH D V S D T
Sbjct: 40 PALNRLFTAGRDSIIRIW-SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTT 98
Query: 234 FKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK-KLRAALQVNK 292
K+W C+ +++ H D + A+ +K + V + D +I +W AL +
Sbjct: 99 VKVWNAHKGFCMSTLRT-HKDYVKALAYAKDKE-LVASAGLDRQIFLWDVNTLTALTASN 156
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+L +K ++ +LA++ GT++ SG+ ++ + VW D + ++K
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVW-----------DPRTCAKLMK 205
Query: 353 GALRGHT---KAILCLAVVSNLLFSGSSDNTIRIW 384
L+GHT KA+L + L SGSSD TIR+W
Sbjct: 206 --LKGHTDNVKALLLNRDGTQCL-SGSSDGTIRLW 237
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 231 DRTFKIWRTSDFR---CLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
D +IW + + + S+++ H D +N IV+ N + + S+DT +KVW
Sbjct: 51 DSIIRIWSVNQHKQDPYIASMEH-HTDWVNDIVLC-CNGKTLISASSDTTVKVWNA---- 104
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSG 347
K + TL HK V ALA + D ++ S DR I +W+ + + S
Sbjct: 105 ----HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA----SN 156
Query: 348 HMVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWR-RSSSVTDHQKGYSC-LAVL 403
+ V +L G+ +I LA+ + ++ SGS++ +R+W R+ + KG++ + L
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKAL 216
Query: 404 EGHRRPVKCLTAVVD 418
+R +CL+ D
Sbjct: 217 LLNRDGTQCLSGSSD 231
>UNIPROTKB|Q8TAF3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9606
"Homo sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0019048 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
OrthoDB:EOG4HHP1W HOVERGEN:HBG079413 OMA:NRLYSAG EMBL:AF468833
EMBL:AB040882 EMBL:AK297349 EMBL:AK298810 EMBL:AK302307
EMBL:AL162064 EMBL:AL832926 EMBL:BX649170 EMBL:BC026353
EMBL:BC037168 IPI:IPI00658079 IPI:IPI00658210 IPI:IPI00791758
IPI:IPI00792902 IPI:IPI00937128 PIR:T47168 RefSeq:NP_065890.1
UniGene:Hs.109778 ProteinModelPortal:Q8TAF3 SMR:Q8TAF3
IntAct:Q8TAF3 STRING:Q8TAF3 PhosphoSite:Q8TAF3 DMDM:74760390
PaxDb:Q8TAF3 PeptideAtlas:Q8TAF3 PRIDE:Q8TAF3
Ensembl:ENST00000302313 Ensembl:ENST00000396258
Ensembl:ENST00000544962 GeneID:57599 KEGG:hsa:57599 UCSC:uc003cit.3
UCSC:uc011ayt.1 UCSC:uc011ayu.1 UCSC:uc011ayv.1
GeneCards:GC03P039069 HGNC:HGNC:30914 HPA:HPA038421 MIM:612167
neXtProt:NX_Q8TAF3 PharmGKB:PA134956949 InParanoid:Q8TAF3
ChiTaRS:WDR48 GenomeRNAi:57599 NextBio:64214 ArrayExpress:Q8TAF3
Bgee:Q8TAF3 CleanEx:HS_WDR48 Genevestigator:Q8TAF3
GermOnline:ENSG00000114742 Uniprot:Q8TAF3
Length = 677
Score = 160 (61.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 57/215 (26%), Positives = 97/215 (45%)
Query: 180 PTLNDRFT--KCFLANNYVQVRRHKKCTWV----HHVDTVXXXXXXXXXXXXXXTSWDRT 233
P LN FT + + + V +HK+ ++ HH D V S D T
Sbjct: 40 PALNRLFTAGRDSIIRIW-SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTT 98
Query: 234 FKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK-KLRAALQVNK 292
K+W C+ +++ H D + A+ +K + V + D +I +W AL +
Sbjct: 99 VKVWNAHKGFCMSTLRT-HKDYVKALAYAKDKE-LVASAGLDRQIFLWDVNTLTALTASN 156
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+L +K ++ +LA++ GT++ SG+ ++ + VW D + ++K
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVW-----------DPRTCAKLMK 205
Query: 353 GALRGHT---KAILCLAVVSNLLFSGSSDNTIRIW 384
L+GHT KA+L + L SGSSD TIR+W
Sbjct: 206 --LKGHTDNVKALLLNRDGTQCL-SGSSDGTIRLW 237
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 231 DRTFKIWRTSDFR---CLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
D +IW + + + S+++ H D +N IV+ N + + S+DT +KVW
Sbjct: 51 DSIIRIWSVNQHKQDPYIASMEH-HTDWVNDIVLC-CNGKTLISASSDTTVKVWNA---- 104
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSG 347
K + TL HK V ALA + D ++ S DR I +W+ + + S
Sbjct: 105 ----HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA----SN 156
Query: 348 HMVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWR-RSSSVTDHQKGYSC-LAVL 403
+ V +L G+ +I LA+ + ++ SGS++ +R+W R+ + KG++ + L
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKAL 216
Query: 404 EGHRRPVKCLTAVVD 418
+R +CL+ D
Sbjct: 217 LLNRDGTQCLSGSSD 231
>UNIPROTKB|F2Z5V5 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 KO:K15361
InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:CU856480
RefSeq:XP_003132167.1 UniGene:Ssc.3296 ProteinModelPortal:F2Z5V5
SMR:F2Z5V5 PRIDE:F2Z5V5 Ensembl:ENSSSCT00000012329 GeneID:100518629
KEGG:ssc:100518629 Uniprot:F2Z5V5
Length = 677
Score = 160 (61.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 57/215 (26%), Positives = 97/215 (45%)
Query: 180 PTLNDRFT--KCFLANNYVQVRRHKKCTWV----HHVDTVXXXXXXXXXXXXXXTSWDRT 233
P LN FT + + + V +HK+ ++ HH D V S D T
Sbjct: 40 PALNRLFTAGRDSIIRIW-SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTT 98
Query: 234 FKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK-KLRAALQVNK 292
K+W C+ +++ H D + A+ +K + V + D +I +W AL +
Sbjct: 99 VKVWNAHKGFCMSTLRT-HKDYVKALAYAKDKE-LVASAGLDRQIFLWDVNTLTALTASN 156
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+L +K ++ +LA++ GT++ SG+ ++ + VW D + ++K
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVW-----------DPRTCAKLMK 205
Query: 353 GALRGHT---KAILCLAVVSNLLFSGSSDNTIRIW 384
L+GHT KA+L + L SGSSD TIR+W
Sbjct: 206 --LKGHTDNVKALLLNRDGTQCL-SGSSDGTIRLW 237
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 231 DRTFKIWRTSDFR---CLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
D +IW + + + S+++ H D +N IV+ N + + S+DT +KVW
Sbjct: 51 DSIIRIWSVNQHKQDPYIASMEH-HTDWVNDIVLC-CNGKTLISASSDTTVKVWNA---- 104
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSG 347
K + TL HK V ALA + D ++ S DR I +W+ + + S
Sbjct: 105 ----HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA----SN 156
Query: 348 HMVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWR-RSSSVTDHQKGYSC-LAVL 403
+ V +L G+ +I LA+ + ++ SGS++ +R+W R+ + KG++ + L
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKAL 216
Query: 404 EGHRRPVKCLTAVVD 418
+R +CL+ D
Sbjct: 217 LLNRDGTQCLSGSSD 231
>UNIPROTKB|Q5RAW8 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9601
"Pongo abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
OrthoDB:EOG4HHP1W GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413
OMA:NRLYSAG EMBL:CR858893 RefSeq:NP_001125636.1 UniGene:Pab.18183
ProteinModelPortal:Q5RAW8 Ensembl:ENSPPYT00000016282
GeneID:100172554 KEGG:pon:100172554 InParanoid:Q5RAW8
Uniprot:Q5RAW8
Length = 677
Score = 160 (61.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 57/215 (26%), Positives = 97/215 (45%)
Query: 180 PTLNDRFT--KCFLANNYVQVRRHKKCTWV----HHVDTVXXXXXXXXXXXXXXTSWDRT 233
P LN FT + + + V +HK+ ++ HH D V S D T
Sbjct: 40 PALNRLFTAGRDSIIRIW-SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTT 98
Query: 234 FKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK-KLRAALQVNK 292
K+W C+ +++ H D + A+ +K + V + D +I +W AL +
Sbjct: 99 VKVWNAHKGFCMSTLRT-HKDYVKALAYAKDKE-LVASAGLDRQIFLWDVNTLTALTASN 156
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
+L +K ++ +LA++ GT++ SG+ ++ + VW D + ++K
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVW-----------DPRTCAKLMK 205
Query: 353 GALRGHT---KAILCLAVVSNLLFSGSSDNTIRIW 384
L+GHT KA+L + L SGSSD TIR+W
Sbjct: 206 --LKGHTDNVKALLLNRDGTQCL-SGSSDGTIRLW 237
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 231 DRTFKIWRTSDFR---CLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
D +IW + + + S+++ H D +N IV+ N + + S+DT +KVW
Sbjct: 51 DSIIRIWSVNQHKQDPYIASMEH-HTDWVNDIVLC-CNGKTLISASSDTTVKVWNA---- 104
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSG 347
K + TL HK V ALA + D ++ S DR I +W+ + + S
Sbjct: 105 ----HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA----SN 156
Query: 348 HMVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWR-RSSSVTDHQKGYSC-LAVL 403
+ V +L G+ +I LA+ + ++ SGS++ +R+W R+ + KG++ + L
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKAL 216
Query: 404 EGHRRPVKCLTAVVD 418
+R +CL+ D
Sbjct: 217 LLNRDGTQCLSGSSD 231
>ZFIN|ZDB-GENE-061110-55 [details] [associations]
symbol:zgc:153492 "zgc:153492" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-061110-55 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR021772 Pfam:PF11816
GeneTree:ENSGT00520000055738 EMBL:CABZ01090140 EMBL:CU633479
IPI:IPI00509466 Ensembl:ENSDART00000105610 Bgee:F1R8P7
Uniprot:F1R8P7
Length = 524
Score = 158 (60.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 56/213 (26%), Positives = 92/213 (43%)
Query: 180 PTLNDRFT--KCFLANNYVQVRRHKK---CTWVHHVDTVXXXXXXXXXXXXXXTSWDRTF 234
P LN FT + + + V +HK + HH D V S D T
Sbjct: 40 PALNRLFTAGRDSIIRIW-SVNQHKDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTV 98
Query: 235 KIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK-KLRAALQVNKK 293
K+W C+ +++ H D + A+ +K + V + D +I +W AL +
Sbjct: 99 KVWNAHKGFCMSTLRT-HKDYVKALAYAKDKE-LVASAGLDRQIFLWDVNTLTALTASNN 156
Query: 294 HSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKG 353
+L +K ++ +LA++ GTV+ SG+ ++ + VW D + ++K
Sbjct: 157 TVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVW-----------DPRTCAKLMK- 204
Query: 354 ALRGHTKAI--LCLAVVSNLLFSGSSDNTIRIW 384
L+GHT + L L SGSSD TIR+W
Sbjct: 205 -LKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLW 236
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 51/194 (26%), Positives = 92/194 (47%)
Query: 231 DRTFKIWRTSDFR--CLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D +IW + + + S+++ H D +N IV+ N + + S+DT +KVW
Sbjct: 51 DSIIRIWSVNQHKDPYIASMEH-HTDWVNDIVLC-CNGKTLISASSDTTVKVWNA----- 103
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
K + TL HK V ALA + D ++ S DR I +W+ + + S +
Sbjct: 104 ---HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA----SNN 156
Query: 349 MVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWR-RSSSVTDHQKGYSC-LAVLE 404
V +L G+ +I LA+ + ++ SGS++ +R+W R+ + KG++ + L
Sbjct: 157 TVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLL 216
Query: 405 GHRRPVKCLTAVVD 418
+R +CL+ D
Sbjct: 217 LNRDGTQCLSGSSD 230
>UNIPROTKB|E1BFB3 [details] [associations]
symbol:STRN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070016 "armadillo repeat domain binding" evidence=IEA]
[GO:0051721 "protein phosphatase 2A binding" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0030331
"estrogen receptor binding" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IEA] [GO:0005923 "tight junction"
evidence=IEA] [GO:0000159 "protein phosphatase type 2A complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0008285 GO:GO:0000159 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005923
InterPro:IPR013258 Pfam:PF08232 GeneTree:ENSGT00520000055597
CTD:6801 OMA:FNMETRQ EMBL:DAAA02030559 EMBL:DAAA02030560
IPI:IPI00698186 RefSeq:NP_001193033.1 UniGene:Bt.42222
ProteinModelPortal:E1BFB3 Ensembl:ENSBTAT00000024742 GeneID:537010
KEGG:bta:537010 NextBio:20877050 Uniprot:E1BFB3
Length = 780
Score = 158 (60.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 44/140 (31%), Positives = 62/140 (44%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEKHKSA 306
+H D I A+ + + T S D +K+W L+ K SL + T HK
Sbjct: 461 SHFDGIRALAFHPTEPVLI-TASEDHTLKMWN-LQKTAPAKKSTSLDVEPIYTFRAHKGP 518
Query: 307 VTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAI--LC 364
V + +S+ G YSG D I W N +D D VL+G L GHT A+ L
Sbjct: 519 VLCVVMSSSGEQCYSGGADGLIQSWNTTNPN--IDPYDSYDPSVLRGPLLGHTDAVWGLA 576
Query: 365 LAVVSNLLFSGSSDNTIRIW 384
+ L S S+D T+R+W
Sbjct: 577 YSAAHQRLLSCSADGTLRLW 596
Score = 47 (21.6 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 437 SGSLDCEIKIWQI 449
SGS DC I++W +
Sbjct: 723 SGSHDCSIRLWNL 735
>TAIR|locus:4515102561 [details] [associations]
symbol:AT1G21651 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF13639 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 EMBL:CP002684
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016772 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q04724
EMBL:AY065404 EMBL:AY096502 EMBL:AK229742 IPI:IPI00517824
RefSeq:NP_001117325.1 UniGene:At.47967 ProteinModelPortal:Q8VZ06
SMR:Q8VZ06 PaxDb:Q8VZ06 PRIDE:Q8VZ06 EnsemblPlants:AT1G21651.1
GeneID:6241299 KEGG:ath:AT1G21651 TAIR:At1g21651 PhylomeDB:Q8VZ06
ProtClustDB:CLSN2708440 ArrayExpress:Q8VZ06 Genevestigator:Q8VZ06
Uniprot:Q8VZ06
Length = 811
Score = 149 (57.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 43/162 (26%), Positives = 71/162 (43%)
Query: 228 TSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
+S+DRT IW DF + + K H D + A++ + + +G I VW
Sbjct: 540 SSYDRTILIWSLKDFSHVHTFKG-HQDKVMALIHIEGTEPVCVSGDGGGGIFVWSTT-FP 597
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSG 347
L+ + + + + ALA S G V Y+G+ D +I W G+ +
Sbjct: 598 LEEQPLRKWYEPKDWRYTGIHALAYSEYGHV-YTGSGDNTIKAWSLQDGSLLC------- 649
Query: 348 HMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSS 389
+ GH + L VV+ +L+SGS D T+R+W S +
Sbjct: 650 ------TMSGHKSVVSTLVVVNGVLYSGSWDGTVRLWSLSDN 685
Score = 57 (25.1 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 125 GNGDAVKSLVVLGDKLFSAHQDHKIRVWKI 154
G+ D+V L V G LFS+ D I +W +
Sbjct: 522 GHQDSVTGLAVGGGFLFSSSYDRTILIWSL 551
>FB|FBgn0044323 [details] [associations]
symbol:Cka "Connector of kinase to AP-1" species:7227
"Drosophila melanogaster" [GO:0007254 "JNK cascade"
evidence=NAS;TAS] [GO:0007391 "dorsal closure"
evidence=IMP;NAS;TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0042051 "compound eye photoreceptor development"
evidence=IMP] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0072686 "mitotic spindle" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007254 GO:GO:0007391 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046330 GO:GO:0072686
InterPro:IPR013258 Pfam:PF08232 EMBL:AF011332
ProteinModelPortal:Q86M30 SMR:Q86M30 STRING:Q86M30 PaxDb:Q86M30
PRIDE:Q86M30 FlyBase:FBgn0044323 InParanoid:Q86M30
OrthoDB:EOG4HX3G4 ArrayExpress:Q86M30 Bgee:Q86M30 Uniprot:Q86M30
Length = 730
Score = 157 (60.3 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 40/138 (28%), Positives = 64/138 (46%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEKHKSA 306
+H D + +++ + T S D +K+W L+ +Q K SL + T H
Sbjct: 413 SHFDGVRSLIFHPEEPVLI-TASEDHTLKLWN-LQKTVQAKKSASLDVEPLYTFRAHTGP 470
Query: 307 VTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLA 366
V L +S+ G YSG D +I W+ N +D D V G L GHT A+ L
Sbjct: 471 VLCLGMSSSGETCYSGGLDGNIECWQLPSPN--IDPYDCYDPNVHSGTLEGHTDAVWGLT 528
Query: 367 VVSNLLFSGSSDNTIRIW 384
+ + + S S+D T+++W
Sbjct: 529 TMQSNIVSCSADGTVKLW 546
Score = 47 (21.6 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 437 SGSLDCEIKIWQI 449
SGS DC I++W +
Sbjct: 673 SGSHDCSIRLWNL 685
>ASPGD|ASPL0000073843 [details] [associations]
symbol:AN4460 species:162425 "Emericella nidulans"
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 EMBL:BN001303
GO:GO:0006364 GO:GO:0032040 EMBL:AACD01000077 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP OrthoDB:EOG4DZ53K RefSeq:XP_662064.1
ProteinModelPortal:Q5B4S0 STRING:Q5B4S0
EnsemblFungi:CADANIAT00005992 GeneID:2872260 KEGG:ani:AN4460.2
Uniprot:Q5B4S0
Length = 977
Score = 143 (55.4 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 48/168 (28%), Positives = 78/168 (46%)
Query: 268 FVYTGSADTKIKVWK--KLRAALQVNKKHS--LVQTLEKHKSAVTALALSTDGTVLYSGA 323
FV TGS D +K W KL + NK H+ + T + H + AL +S + S +
Sbjct: 508 FVITGSQDRTVKRWNVGKLGPTIG-NKPHTPKALFTRKAHDKDINALDVSPSSALFASAS 566
Query: 324 CDRSILVWERDQGNYI-VDGDDDSGHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDN 379
DR++ +W D G+ + V G + + +G T + A S ++ +GS D
Sbjct: 567 QDRTVKIWSADDGSVVGVLRGHKRGVWSARFSPKG-TPILSADAKSSTNRGMIVTGSGDK 625
Query: 380 TIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAVVDSDYSNRNSD 427
T+++W S++D YSCL EGH V + + D S++ D
Sbjct: 626 TVKLW----SLSD----YSCLLTFEGHTNSVLKVLWLPPPDMSSKTED 665
Score = 103 (41.3 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 28/100 (28%), Positives = 47/100 (47%)
Query: 355 LRGHTKAILCLAV--VSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKC 412
L GH I+C+ V + L +G+ DNT R+WR + Y+C A+L GH +
Sbjct: 428 LDGHDDIIICIDVDWSGHWLATGAKDNTARLWR----LDPQNSSYTCFALLTGHAESLGA 483
Query: 413 LTAVVDSDYSNRNSDHSSTSF---LVYSGSLDCEIKIWQI 449
++ DS + + + + V +GS D +K W +
Sbjct: 484 ISFPRDSPPPDTPAYKAPVNHPPPFVITGSQDRTVKRWNV 523
Score = 97 (39.2 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 251 AHDDAINAIV----VSKSNDGF-VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKS 305
A DD N ++ S SN F + +GS + K++VW +NKK S+ +L+ H S
Sbjct: 186 AGDDDDNEMMDLDSASNSNGAFRLASGSEEGKVRVW-------DLNKKKSIA-SLDSHVS 237
Query: 306 AVTALALSTDGTVLYSGACDRSILVWE 332
V +L+ S L S D++++VW+
Sbjct: 238 VVRSLSYSLTENALLSAGRDKTVIVWD 264
Score = 86 (35.3 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 296 LVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMV 350
LV++L+ H + V A + GT+L +GA D SI VW+ +G YI G ++
Sbjct: 103 LVRSLKPHTAPVVTTATDSTGTLLATGAADGSIKVWDI-RGGYITHSFHGHGGVI 156
Score = 65 (27.9 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 27/100 (27%), Positives = 50/100 (50%)
Query: 70 KVKGNSSYIPSLAIAG--KLLYGGSSNGE-IRAWNRDPNNYVNITSTDVGDH--ANVV-A 123
++ GN I LA G + + ++N E IR + P++Y STD ++ A++
Sbjct: 371 RISGNDDDIIDLAYVGPDRSMLALATNTESIRIVSVGPSDYR--PSTDGQEYFGADIAHL 428
Query: 124 TGNGDAVKSLVV--LGDKLFSAHQDHKIRVWKIDNNTSAY 161
G+ D + + V G L + +D+ R+W++D S+Y
Sbjct: 429 DGHDDIIICIDVDWSGHWLATGAKDNTARLWRLDPQNSSY 468
Score = 60 (26.2 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 88 LYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVLGDKLFSAHQDH 147
L GS G++R W D N +I S D H +VV + S + + L SA +D
Sbjct: 209 LASGSEEGKVRVW--DLNKKKSIASLD--SHVSVVRS------LSYSLTENALLSAGRDK 258
Query: 148 KIRVW 152
+ VW
Sbjct: 259 TVIVW 263
Score = 42 (19.8 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 85 GKLLYGGSSNGEIRAWN 101
G LL G+++G I+ W+
Sbjct: 123 GTLLATGAADGSIKVWD 139
Score = 42 (19.8 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 139 KLFSAHQDHKIRVWKIDNNTS 159
+L S ++ K+RVW ++ S
Sbjct: 208 RLASGSEEGKVRVWDLNKKKS 228
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 151 (58.2 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 55/212 (25%), Positives = 95/212 (44%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTS-DFR--CL-ESVKNAHDDAINAIVVSKS 264
H +T+ + D++ ++WR + D R C+ + + +AH + A+ S+
Sbjct: 385 HTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAH--GVGAVSCSRL 442
Query: 265 NDGFVYTGSADTKIKVWK-------KLRAALQVNKKHSLVQTLEK-HKSAVTALALSTDG 316
+ FV T S D IKVW K +AAL + Q E+ H + ++A+S +
Sbjct: 443 KESFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTERGHDKDINSVAVSPND 502
Query: 317 TVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCL--AVVSNLLFS 374
++ +G+ DR +W D S L G GH + I C+ + V +L +
Sbjct: 503 KLIATGSQDRLAKLWSCP---------DCS----LLGVFTGHKRGIWCVQFSPVDQILAT 549
Query: 375 GSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
S+D T+++W + D +SCL EGH
Sbjct: 550 SSADGTLKLW----GLQD----FSCLKTFEGH 573
Score = 113 (44.8 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 36/136 (26%), Positives = 55/136 (40%)
Query: 200 RHKKC--TW-VHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAI 256
R +C TW H+ V D T KIW C ++K + +
Sbjct: 97 RENRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGS-SGVV 155
Query: 257 NAIVVSKSNDGF-VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTD 315
+ + +++ S D KI++W L +K V L+ H SAVT+LA + D
Sbjct: 156 HLVEFHPDISRLQLFSSSMDYKIRIWD-----LNSSK---CVAVLDGHFSAVTSLAFTAD 207
Query: 316 GTVLYSGACDRSILVW 331
G L S D+ +VW
Sbjct: 208 GNTLISSGRDKICMVW 223
Score = 55 (24.4 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 8/19 (42%), Positives = 16/19 (84%)
Query: 139 KLFSAHQDHKIRVWKIDNN 157
+LFS+ D+KIR+W ++++
Sbjct: 168 QLFSSSMDYKIRIWDLNSS 186
Score = 51 (23.0 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 432 SFLVYSGSLDCEIKIWQI 449
SF+V S S DC IK+W I
Sbjct: 445 SFVVTS-SQDCTIKVWNI 461
Score = 41 (19.5 bits), Expect = 9.8e-07, Sum P(3) = 9.8e-07
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 122 VATGNGDAVKSLVVL--GDKLFSAHQDHKIRVWKIDNNTS 159
V G+ AV SL G+ L S+ +D VW + S
Sbjct: 191 VLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRES 230
Score = 38 (18.4 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 397 YSCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+SCL EGH V L + + +R T L SG D +K+W I+
Sbjct: 564 FSCLKTFEGHDASV--LKII----FVSRG-----TQLL--SGGSDGLLKLWTIK 604
>RGD|3782 [details] [associations]
symbol:Strn "striatin, calmodulin binding protein" species:10116
"Rattus norvegicus" [GO:0000159 "protein phosphatase type 2A complex"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005923 "tight junction"
evidence=IEA;ISO] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA;ISO] [GO:0016358 "dendrite
development" evidence=IMP] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO;IPI] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043234 "protein
complex" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IDA] [GO:0048306 "calcium-dependent protein binding"
evidence=NAS] [GO:0051721 "protein phosphatase 2A binding"
evidence=IEA;ISO] [GO:0070016 "armadillo repeat domain binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:3782 GO:GO:0005737 GO:GO:0008285 GO:GO:0043234
GO:GO:0014069 GO:GO:0000159 GO:GO:0016055 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0045211
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016358 GO:GO:0007626 GO:GO:0005923 GO:GO:0005516 GO:GO:0048306
InterPro:IPR013258 Pfam:PF08232 HOGENOM:HOG000236343
HOVERGEN:HBG007117 CTD:6801 OrthoDB:EOG43N7C6 EMBL:X99326
IPI:IPI00188880 RefSeq:NP_062021.1 UniGene:Rn.37469
ProteinModelPortal:P70483 MINT:MINT-225992 STRING:P70483
PhosphoSite:P70483 PRIDE:P70483 GeneID:29149 KEGG:rno:29149
UCSC:RGD:3782 InParanoid:P70483 NextBio:608151 PMAP-CutDB:P70483
Genevestigator:P70483 GermOnline:ENSRNOG00000004806 Uniprot:P70483
Length = 780
Score = 156 (60.0 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 45/140 (32%), Positives = 62/140 (44%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEKHKSA 306
+H D I A+ + T S D +K+W L+ K SL + T HK
Sbjct: 461 SHFDGIRALAFHPIEPVLI-TASEDHTLKMWN-LQKTAPAKKSTSLDVEPIYTFRAHKGP 518
Query: 307 VTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAI--LC 364
V + +S++G YSG D I W N VD D VL+G L GHT A+ L
Sbjct: 519 VLCVVMSSNGEQCYSGGTDGLIQSWSTTNPN--VDPYDSYDPSVLRGPLLGHTDAVWGLA 576
Query: 365 LAVVSNLLFSGSSDNTIRIW 384
+ L S S+D T+R+W
Sbjct: 577 YSAAHQRLLSCSADGTLRLW 596
Score = 47 (21.6 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 437 SGSLDCEIKIWQI 449
SGS DC I++W +
Sbjct: 723 SGSHDCSIRLWNL 735
>RGD|621827 [details] [associations]
symbol:Strn3 "striatin, calmodulin binding protein 3"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000159 "protein phosphatase type 2A complex" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005794 "Golgi apparatus" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0032355 "response to estradiol stimulus" evidence=IDA]
[GO:0032403 "protein complex binding" evidence=ISO;IDA;IPI]
[GO:0033147 "negative regulation of intracellular estrogen receptor
signaling pathway" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051721
"protein phosphatase 2A binding" evidence=IEA;ISO] [GO:0070016
"armadillo repeat domain binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:621827 GO:GO:0005886 GO:GO:0005794 GO:GO:0005737 GO:GO:0045892
GO:GO:0043234 GO:GO:0005654 GO:GO:0000159 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403
GO:GO:0032355 GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0003700
GO:GO:0000122 GO:GO:0033147 InterPro:IPR013258 Pfam:PF08232
CTD:29966 GeneTree:ENSGT00520000055597 HOGENOM:HOG000236343
OrthoDB:EOG4TMR1P HOVERGEN:HBG007117 EMBL:AABR03048613
EMBL:AY026526 IPI:IPI00760130 IPI:IPI00851143 RefSeq:NP_001025068.1
UniGene:Rn.8394 ProteinModelPortal:P58405 IntAct:P58405
MINT:MINT-1775849 STRING:P58405 PhosphoSite:P58405 PRIDE:P58405
Ensembl:ENSRNOT00000007509 GeneID:114520 KEGG:rno:114520
UCSC:RGD:621827 InParanoid:P58405 ArrayExpress:P58405
Genevestigator:P58405 Uniprot:P58405
Length = 794
Score = 156 (60.0 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 47/140 (33%), Positives = 65/140 (46%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEKHKSA 306
+H D + A+ V T S D +K+W L+ + K SL + T H
Sbjct: 475 SHFDGVRALAFHPVEPVLV-TASEDHTLKLWN-LQKTVPAKKSASLDVEPIYTFRAHIGP 532
Query: 307 VTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLA 366
V +LA+S++G +SG D +I W N VD D VL G L HT A+ LA
Sbjct: 533 VLSLAISSNGEQCFSGGIDATIQWWNMPSPN--VDPYDTYESHVLAGTLVAHTDAVWGLA 590
Query: 367 V--VSNLLFSGSSDNTIRIW 384
+ N L S S+D TIR+W
Sbjct: 591 YSGIKNQLLSCSADGTIRLW 610
Score = 47 (21.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 437 SGSLDCEIKIWQI 449
SGS DC I++W +
Sbjct: 737 SGSHDCSIRLWNL 749
>MGI|MGI:2151064 [details] [associations]
symbol:Strn3 "striatin, calmodulin binding protein 3"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0030425 "dendrite" evidence=ISO] [GO:0032355 "response to
estradiol stimulus" evidence=ISO] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033147 "negative regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0051721 "protein phosphatase 2A binding"
evidence=ISO] [GO:0070016 "armadillo repeat domain binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2151064 GO:GO:0005886 GO:GO:0005794
GO:GO:0005654 GO:GO:0000159 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032355 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0003700 GO:GO:0000122 GO:GO:0033147
InterPro:IPR013258 Pfam:PF08232 CTD:29966
GeneTree:ENSGT00520000055597 HOGENOM:HOG000236343 OMA:IKRPSGD
OrthoDB:EOG4TMR1P HOVERGEN:HBG007117 EMBL:AF307777 IPI:IPI00229990
RefSeq:NP_443205.1 UniGene:Mm.65979 ProteinModelPortal:Q9ERG2
SMR:Q9ERG2 IntAct:Q9ERG2 STRING:Q9ERG2 PhosphoSite:Q9ERG2
PaxDb:Q9ERG2 PRIDE:Q9ERG2 Ensembl:ENSMUST00000013130 GeneID:94186
KEGG:mmu:94186 UCSC:uc007nmt.2 InParanoid:Q9ERG2 NextBio:352151
Bgee:Q9ERG2 CleanEx:MM_STRN3 Genevestigator:Q9ERG2
GermOnline:ENSMUSG00000020954 Uniprot:Q9ERG2
Length = 796
Score = 156 (60.0 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 47/140 (33%), Positives = 65/140 (46%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEKHKSA 306
+H D + A+ V T S D +K+W L+ + K SL + T H
Sbjct: 477 SHFDGVRALAFHPVEPVLV-TASEDHTLKLWN-LQKTVPAKKSASLDVEPIYTFRAHIGP 534
Query: 307 VTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLA 366
V +LA+S++G +SG D +I W N VD D VL G L HT A+ LA
Sbjct: 535 VLSLAISSNGEQCFSGGIDATIQWWNMPSPN--VDPYDTYESNVLAGTLVAHTDAVWGLA 592
Query: 367 V--VSNLLFSGSSDNTIRIW 384
+ N L S S+D TIR+W
Sbjct: 593 YSGIKNQLLSCSADGTIRLW 612
Score = 47 (21.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 437 SGSLDCEIKIWQI 449
SGS DC I++W +
Sbjct: 739 SGSHDCSIRLWNL 751
>UNIPROTKB|Q13033 [details] [associations]
symbol:STRN3 "Striatin-3" species:9606 "Homo sapiens"
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005516 "calmodulin
binding" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0030425 "dendrite" evidence=ISS] [GO:0033147 "negative
regulation of intracellular estrogen receptor signaling pathway"
evidence=ISS] [GO:0032355 "response to estradiol stimulus"
evidence=ISS] [GO:0051721 "protein phosphatase 2A binding"
evidence=IDA] [GO:0000159 "protein phosphatase type 2A complex"
evidence=IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005634 GO:GO:0005794 GO:GO:0005737
GO:GO:0045892 GO:GO:0043234 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403
GO:GO:0032355 GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0003700
GO:GO:0000122 GO:GO:0005516 GO:GO:0051721 GO:GO:0033147
InterPro:IPR013258 Pfam:PF08232 CTD:29966 HOGENOM:HOG000236343
OMA:IKRPSGD EMBL:U17989 EMBL:AK314041 EMBL:AL049830 EMBL:BC132673
EMBL:AF243424 IPI:IPI00011461 IPI:IPI00477001 PIR:JC2522
RefSeq:NP_001077362.1 RefSeq:NP_055389.3 UniGene:Hs.401843
ProteinModelPortal:Q13033 SMR:Q13033 IntAct:Q13033 STRING:Q13033
PhosphoSite:Q13033 DMDM:223634717 PaxDb:Q13033 PRIDE:Q13033
Ensembl:ENST00000355683 Ensembl:ENST00000357479 GeneID:29966
KEGG:hsa:29966 UCSC:uc001wqu.2 UCSC:uc001wqv.2
GeneCards:GC14M031363 H-InvDB:HIX0037669 HGNC:HGNC:15720
HPA:HPA003392 HPA:HPA004636 MIM:614766 neXtProt:NX_Q13033
PharmGKB:PA38394 HOVERGEN:HBG007117 InParanoid:Q13033 ChiTaRS:STRN3
GenomeRNAi:29966 NextBio:52695 ArrayExpress:Q13033 Bgee:Q13033
CleanEx:HS_STRN3 Genevestigator:Q13033 GermOnline:ENSG00000196792
Uniprot:Q13033
Length = 797
Score = 156 (60.0 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 56/189 (29%), Positives = 84/189 (44%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEKHKSA 306
+H D + A+ V T S D +K+W L+ + K SL + T H
Sbjct: 478 SHFDGVRALAFHPVEPVLV-TASEDHTLKLWN-LQKTVPAKKSASLDVEPIYTFRAHIGP 535
Query: 307 VTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLA 366
V +LA+S++G +SG D +I W + VD D VL G L GHT A+ LA
Sbjct: 536 VLSLAISSNGEQCFSGGIDATIQWWNMPSPS--VDPYDTYEPNVLAGTLVGHTDAVWGLA 593
Query: 367 V--VSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAVVDSDYSNR 424
+ N L S S+D T+R+W + Q+ C+ G ++ T+V D+
Sbjct: 594 YSGIKNQLLSCSADGTVRLW-------NPQEKLPCICTYNGDKKH-GIPTSV---DFIGC 642
Query: 425 NSDHSSTSF 433
+ H TSF
Sbjct: 643 DPAHMVTSF 651
Score = 47 (21.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 437 SGSLDCEIKIWQI 449
SGS DC I++W +
Sbjct: 740 SGSHDCSIRLWNL 752
>FB|FBgn0028496 [details] [associations]
symbol:CG30116 species:7227 "Drosophila melanogaster"
[GO:0016505 "apoptotic protease activator activity" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
UCSC:CG30116-RC FlyBase:FBgn0028496 EMBL:BT015296
ProteinModelPortal:Q6AWF2 PRIDE:Q6AWF2 InParanoid:Q6AWF2
ArrayExpress:Q6AWF2 Bgee:Q6AWF2 Uniprot:Q6AWF2
Length = 1923
Score = 162 (62.1 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 63/249 (25%), Positives = 108/249 (43%)
Query: 94 NGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVLGDKL--FSAHQDHKIRV 151
NGE A + + V+I + +G+ N VK +VVL D L S +D + V
Sbjct: 1265 NGEFLATGSE-DRLVHIWNLALGEICNSFKGHTAPVVK-VVVLMDSLRVISTDRDSMLLV 1322
Query: 152 WKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYVQV----RRHKKCTWV 207
W + ++ + + G Y+ ++ T N RF +N +++ + +K + V
Sbjct: 1323 W-MAHSGNLLQTIQGP-----YKSLSV--TNNMRFAVSTNGDNTLKIWSLTQEDEKYS-V 1373
Query: 208 HHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDG 267
H D + S D + K+W+ + + L V H DA+ + VS +N
Sbjct: 1374 SHSDEITCFEISADSVHIISGSRDMSLKVWQATGGK-LSQVLVGHSDAVTCVAVSVTNKT 1432
Query: 268 FVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRS 327
V +GS D + +W L V TL H V + +S DG+ SG+ D++
Sbjct: 1433 QVLSGSKDMNLILWDLLTG--------EEVHTLAGHLGPVIGVKVSADGSTAVSGSDDKT 1484
Query: 328 ILVWERDQG 336
++VWE +G
Sbjct: 1485 LIVWETKRG 1493
>MGI|MGI:1333757 [details] [associations]
symbol:Strn "striatin, calmodulin binding protein"
species:10090 "Mus musculus" [GO:0005516 "calmodulin binding"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005923
"tight junction" evidence=ISO] [GO:0007626 "locomotory behavior"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=ISO] [GO:0016020 "membrane" evidence=ISO] [GO:0016055 "Wnt
receptor signaling pathway" evidence=ISO] [GO:0016358 "dendrite
development" evidence=ISO] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0043197
"dendritic spine" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=ISO]
[GO:0051721 "protein phosphatase 2A binding" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1333757 GO:GO:0005737 GO:GO:0008285 GO:GO:0014069
GO:GO:0000159 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0045211 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016358
GO:GO:0007626 GO:GO:0005923 InterPro:IPR013258 Pfam:PF08232
GeneTree:ENSGT00520000055597 HOGENOM:HOG000236343
HOVERGEN:HBG007117 CTD:6801 OMA:FNMETRQ EMBL:AJ223777 EMBL:BC090968
EMBL:BC150727 IPI:IPI00352986 RefSeq:NP_035630.2 UniGene:Mm.311915
UniGene:Mm.391038 UniGene:Mm.486430 ProteinModelPortal:O55106
SMR:O55106 IntAct:O55106 STRING:O55106 PhosphoSite:O55106
PaxDb:O55106 PRIDE:O55106 Ensembl:ENSMUST00000145910 GeneID:268980
KEGG:mmu:268980 InParanoid:B2RWV9 NextBio:392625 PMAP-CutDB:O55106
Bgee:O55106 CleanEx:MM_STRN Genevestigator:O55106
GermOnline:ENSMUSG00000024077 Uniprot:O55106
Length = 780
Score = 155 (59.6 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 45/140 (32%), Positives = 62/140 (44%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEKHKSA 306
+H D I A+ + T S D +K+W L+ K SL + T HK
Sbjct: 461 SHFDGIRALAFHPIEPVLI-TASEDHTLKMWN-LQKTAPAKKSTSLDVEPIYTFRAHKGP 518
Query: 307 VTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAI--LC 364
V + +S++G YSG D I W N VD D VL+G L GHT A+ L
Sbjct: 519 VLCVVMSSNGEQCYSGGTDGRIQSWSTTNPN--VDPYDAYDPSVLRGPLLGHTDAVWGLA 576
Query: 365 LAVVSNLLFSGSSDNTIRIW 384
+ L S S+D T+R+W
Sbjct: 577 YSAAHQRLLSCSADGTLRLW 596
Score = 47 (21.6 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 437 SGSLDCEIKIWQI 449
SGS DC I++W +
Sbjct: 723 SGSHDCSIRLWNL 735
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 158 (60.7 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 62/284 (21%), Positives = 119/284 (41%)
Query: 143 AHQDHKIRVWKIDNNTSAYYSTSGKLKNK---YYERIATLPTLNDRFTKCFLANNYVQVR 199
AH + D+N Y + S +L+ + Y E + + L + +A+N ++
Sbjct: 301 AHTAGVVLTATADHNLLLYEARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLK 360
Query: 200 ----RHKKCTWVH-HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTS---DFRCLESVKNA 251
+ C +H H D V + D++ +IWR + C+ +
Sbjct: 361 VFELQTSACQILHGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKAGQVMCVAQ-GSG 419
Query: 252 HDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHS------LVQTLEK-HK 304
H ++ + S+ + F+ TGS D +K+W +A L N QT ++ H
Sbjct: 420 HTHSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHD 479
Query: 305 SAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILC 364
+ ++A++ + +L +G+ DR+ +W Q L G GH + + C
Sbjct: 480 KDINSVAIAPNDKLLATGSQDRTAKLWALPQCQ-------------LLGVFSGHRRGLWC 526
Query: 365 L--AVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
+ + + +L + S+D TI++W ++ D +SCL EGH
Sbjct: 527 VQFSPMDQVLATASADGTIKLW----ALQD----FSCLKTFEGH 562
Score = 44 (20.5 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 140 LFSAHQDHKIRVWKIDNNT-----SAYYS 163
LFS+ D IRVW + + + +A+YS
Sbjct: 168 LFSSATDAAIRVWSLQDRSCLAVLTAHYS 196
>UNIPROTKB|F1NH54 [details] [associations]
symbol:STRN3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000159 "protein
phosphatase type 2A complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051721 "protein
phosphatase 2A binding" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005794 GO:GO:0005654
GO:GO:0000159 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0003700 GO:GO:0000122 InterPro:IPR013258 Pfam:PF08232
GeneTree:ENSGT00520000055597 OMA:IKRPSGD EMBL:AADN02003354
IPI:IPI00584958 Ensembl:ENSGALT00000016143 ArrayExpress:F1NH54
Uniprot:F1NH54
Length = 811
Score = 155 (59.6 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 48/140 (34%), Positives = 65/140 (46%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEKHKSA 306
+H D + A+ V T S D +K+W L+ + K SL + T H
Sbjct: 492 SHFDGVRALAFHPVEPVLV-TASEDHTLKLWN-LQKTVPAKKSASLDVEPIYTFRAHIGP 549
Query: 307 VTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLA 366
V +LA+S++G +SG D +I W N VD D VL G L HT A+ LA
Sbjct: 550 VLSLAISSNGEQCFSGGIDATIQWWNMPSPN--VDPYDTYEPNVLAGTLVAHTDAVWGLA 607
Query: 367 V--VSNLLFSGSSDNTIRIW 384
V N L S S+D TIR+W
Sbjct: 608 YSGVKNHLLSCSADGTIRLW 627
Score = 47 (21.6 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 437 SGSLDCEIKIWQI 449
SGS DC I++W +
Sbjct: 754 SGSHDCSIRLWNL 766
>UNIPROTKB|O43815 [details] [associations]
symbol:STRN "Striatin" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS;NAS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0014069 "postsynaptic density" evidence=ISS]
[GO:0016358 "dendrite development" evidence=ISS] [GO:0007626
"locomotory behavior" evidence=ISS] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0051721 "protein phosphatase 2A binding"
evidence=IDA] [GO:0000159 "protein phosphatase type 2A complex"
evidence=IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0005923 "tight junction" evidence=IDA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IMP]
[GO:0016020 "membrane" evidence=ISS] [GO:0043197 "dendritic spine"
evidence=ISS] [GO:0070830 "tight junction assembly" evidence=NAS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0045211 "postsynaptic membrane" evidence=ISS]
[GO:0030331 "estrogen receptor binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008285
GO:GO:0043234 GO:GO:0014069 GO:GO:0016055 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403
GO:GO:0045211 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016358 GO:GO:0007626 GO:GO:0005923
GO:GO:0005516 Pathway_Interaction_DB:er_nongenomic_pathway
GO:GO:0051721 GO:GO:0070830 InterPro:IPR013258 Pfam:PF08232
HOGENOM:HOG000236343 HOVERGEN:HBG007117 EMBL:AJ223814 EMBL:AC007404
EMBL:AC007382 EMBL:BC106879 IPI:IPI00014456 IPI:IPI00654594
RefSeq:NP_003153.2 UniGene:Hs.127486 ProteinModelPortal:O43815
SMR:O43815 IntAct:O43815 STRING:O43815 PhosphoSite:O43815
PaxDb:O43815 PRIDE:O43815 Ensembl:ENST00000263918
Ensembl:ENST00000379213 GeneID:6801 KEGG:hsa:6801 UCSC:uc002rpn.3
UCSC:uc010ezx.3 CTD:6801 GeneCards:GC02M036987 HGNC:HGNC:11424
HPA:HPA017286 MIM:614765 neXtProt:NX_O43815 PharmGKB:PA36224
InParanoid:O43815 OMA:FNMETRQ OrthoDB:EOG43N7C6 PhylomeDB:O43815
GenomeRNAi:6801 NextBio:26559 PMAP-CutDB:O43815 ArrayExpress:O43815
Bgee:O43815 CleanEx:HS_STRN Genevestigator:O43815
GermOnline:ENSG00000115808 Uniprot:O43815
Length = 780
Score = 154 (59.3 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 44/140 (31%), Positives = 62/140 (44%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEKHKSA 306
+H D I A+ + T S D +K+W L+ K SL + T HK
Sbjct: 461 SHFDGIRALAFHPIEPVLI-TASEDHTLKMWN-LQKTAPAKKSTSLDVEPIYTFRAHKGP 518
Query: 307 VTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAI--LC 364
V + +S++G YSG D I W N +D D VL+G L GHT A+ L
Sbjct: 519 VLCVVMSSNGEQCYSGGTDGLIQGWNTTNPN--IDPYDSYDPSVLRGPLLGHTDAVWGLA 576
Query: 365 LAVVSNLLFSGSSDNTIRIW 384
+ L S S+D T+R+W
Sbjct: 577 YSAAHQRLLSCSADGTLRLW 596
Score = 47 (21.6 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 437 SGSLDCEIKIWQI 449
SGS DC I++W +
Sbjct: 723 SGSHDCSIRLWNL 735
>UNIPROTKB|F1S4P0 [details] [associations]
symbol:STRN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070016 "armadillo repeat domain binding" evidence=IEA]
[GO:0051721 "protein phosphatase 2A binding" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0030331
"estrogen receptor binding" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IEA] [GO:0005923 "tight junction"
evidence=IEA] [GO:0000159 "protein phosphatase type 2A complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0008285 GO:GO:0000159 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005923
InterPro:IPR013258 Pfam:PF08232 GeneTree:ENSGT00520000055597
CTD:6801 OMA:FNMETRQ EMBL:CU570644 EMBL:CU571019
RefSeq:XP_003125288.1 Ensembl:ENSSSCT00000009301 GeneID:100524371
KEGG:ssc:100524371 Uniprot:F1S4P0
Length = 780
Score = 154 (59.3 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 44/140 (31%), Positives = 62/140 (44%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEKHKSA 306
+H D I A+ + T S D +K+W L+ K SL + T HK
Sbjct: 461 SHFDGIRALAFHPIEPVLI-TASEDHTLKMWN-LQKTAPAKKSTSLDVEPIYTFRAHKGP 518
Query: 307 VTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAI--LC 364
V + +S++G YSG D I W N +D D VL+G L GHT A+ L
Sbjct: 519 VLCVVMSSNGEQCYSGGTDGLIQGWNTTNPN--IDPYDSYDPSVLRGPLLGHTDAVWGLA 576
Query: 365 LAVVSNLLFSGSSDNTIRIW 384
+ L S S+D T+R+W
Sbjct: 577 YSAAHQRLLSCSADGTLRLW 596
Score = 47 (21.6 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 437 SGSLDCEIKIWQI 449
SGS DC I++W +
Sbjct: 723 SGSHDCSIRLWNL 735
>UNIPROTKB|A5D7H2 [details] [associations]
symbol:STRN3 "Striatin-3" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0070016 "armadillo repeat domain binding" evidence=IEA]
[GO:0051721 "protein phosphatase 2A binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0000159 "protein phosphatase type 2A
complex" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005794 GO:GO:0005737
GO:GO:0005654 GO:GO:0000159 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0003700
GO:GO:0000122 InterPro:IPR013258 Pfam:PF08232 EMBL:BC140553
IPI:IPI00852428 RefSeq:NP_001091511.1 UniGene:Bt.56528
ProteinModelPortal:A5D7H2 Ensembl:ENSBTAT00000029119 GeneID:516375
KEGG:bta:516375 CTD:29966 GeneTree:ENSGT00520000055597
HOGENOM:HOG000236343 InParanoid:A5D7H2 OMA:IKRPSGD
OrthoDB:EOG4TMR1P NextBio:20872201 ArrayExpress:A5D7H2
Uniprot:A5D7H2
Length = 797
Score = 154 (59.3 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 46/140 (32%), Positives = 65/140 (46%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEKHKSA 306
+H D + A+ V T S D +K+W L+ + K SL + T H
Sbjct: 478 SHFDGVRALAFHPVEPVLV-TASEDHTLKLWN-LQKTVPAKKSASLDVEPIYTFRAHIGP 535
Query: 307 VTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLA 366
V +LA+S++G +SG D +I W N VD D VL G L HT A+ LA
Sbjct: 536 VLSLAISSNGEQCFSGGTDATIQWWNMPSPN--VDPYDTYEPNVLAGTLIAHTDAVWGLA 593
Query: 367 V--VSNLLFSGSSDNTIRIW 384
+ N L S S+D T+R+W
Sbjct: 594 YSGIKNQLLSCSADGTVRLW 613
Score = 47 (21.6 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 437 SGSLDCEIKIWQI 449
SGS DC I++W +
Sbjct: 740 SGSHDCSIRLWNL 752
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 153 (58.9 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 57/180 (31%), Positives = 84/180 (46%)
Query: 243 RCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEK 302
RC S+ N HD I + S S + TGS D ++W + + T++
Sbjct: 125 RCTASM-NGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDC--------DTQTPIATMKG 175
Query: 303 HKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAI 362
H + V+ +A + D +++ +G+ D +I W+ +G+ I GD ALR HTK I
Sbjct: 176 HTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPI--GD----------ALRRHTKPI 223
Query: 363 --LC-----LAVVSN--LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCL 413
LC LA S LL SGS DNT+RIW + K + L L GH P+ C+
Sbjct: 224 MALCWQPLHLAPDSGPYLLASGSKDNTVRIW--------NVKLRTLLFTLSGHTAPITCV 275
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 154 (59.3 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 50/164 (30%), Positives = 73/164 (44%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAH-DDAINAIVVSKSNDG-FVYTGSADTKIKVWKKLRA 286
S DRT +W D E H DD + ++ S DG F+ GS D I++W
Sbjct: 407 SGDRTVCLW---DVEAGEQKLILHTDDGVTTVMFSP--DGQFIAAGSLDKVIRIW----- 456
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
+LV+ L H+ +V ++A S DG L SG+ D +I +WE + +
Sbjct: 457 ----TSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKE 512
Query: 347 GHMVLKGALRGHTKAILCLAVVSN--LLFSGSSDNTIRIWRRSS 388
G + K GH IL + V + + SGS D TI+ W S
Sbjct: 513 GG-ICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDS 555
Score = 154 (59.3 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 67/259 (25%), Positives = 111/259 (42%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKY---YERIA-TLPTLNDRFTKCFLA 192
G L + +D +IR+W I Y +G + Y + + TL + + T C
Sbjct: 358 GKYLATGVEDQQIRIWDIAQKR-VYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWD 416
Query: 193 NNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAH 252
V+ K +H D V S D+ +IW TS +E + + H
Sbjct: 417 ---VEAGEQKLI--LHTDDGVTTVMFSPDGQFIAAGSLDKVIRIW-TSSGTLVEQL-HGH 469
Query: 253 DDAINAIVVSKSNDG-FVYTGSADTKIKVWKKL---RAALQVNKKHSLV-QTLEKHKSAV 307
++++ ++ S DG ++ +GS D IK+W+ A + K+ + QT HK +
Sbjct: 470 EESVYSVAFSP--DGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFI 527
Query: 308 TALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAV 367
++ +S DG + SG+ DR+I W DS H L L+GH +++ +AV
Sbjct: 528 LSVTVSPDGKWIISGSKDRTIQFWS-----------PDSPHSQL--TLQGHNNSVISVAV 574
Query: 368 VSN--LLFSGSSDNTIRIW 384
N +GS D RIW
Sbjct: 575 SPNGHCFATGSGDLRARIW 593
>UNIPROTKB|Q9NRL3 [details] [associations]
symbol:STRN4 "Striatin-4" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0051721 "protein phosphatase 2A
binding" evidence=IDA] [GO:0000159 "protein phosphatase type 2A
complex" evidence=IDA] [GO:0070016 "armadillo repeat domain
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005516 GO:GO:0051721
InterPro:IPR013258 Pfam:PF08232 HOGENOM:HOG000236343
HOVERGEN:HBG007117 EMBL:AF212940 EMBL:BC004910 EMBL:BC034604
IPI:IPI00003016 RefSeq:NP_001034966.1 RefSeq:NP_037535.2
UniGene:Hs.631590 ProteinModelPortal:Q9NRL3 SMR:Q9NRL3
IntAct:Q9NRL3 MINT:MINT-1371553 STRING:Q9NRL3 PhosphoSite:Q9NRL3
DMDM:152031693 PaxDb:Q9NRL3 PRIDE:Q9NRL3 Ensembl:ENST00000263280
GeneID:29888 KEGG:hsa:29888 UCSC:uc002pfl.3 CTD:29888
GeneCards:GC19M047222 H-InvDB:HIX0096898 HGNC:HGNC:15721
HPA:HPA043527 MIM:614767 neXtProt:NX_Q9NRL3 PharmGKB:PA134863218
PhylomeDB:Q9NRL3 ChiTaRS:STRN4 GenomeRNAi:29888 NextBio:52431
PMAP-CutDB:Q9NRL3 ArrayExpress:Q9NRL3 Bgee:Q9NRL3 CleanEx:HS_STRN4
Genevestigator:Q9NRL3 GermOnline:ENSG00000090372 Uniprot:Q9NRL3
Length = 753
Score = 151 (58.2 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 47/146 (32%), Positives = 67/146 (45%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEKHKSA 306
+H D I ++ S + T S D +K+W L+ A+ K +L + H+
Sbjct: 436 SHYDGIRSLAFHHSQSALL-TASEDGTLKLWN-LQKAVTAKKNAALDVEPIHAFRAHRGP 493
Query: 307 VTALALSTDGTVLYSGACDRSILVWE-RDQGNYIVDGDDDSGHMVLKGALRGHTKAI--L 363
V A+A+ ++ YSG D I W+ D DG D S VL L GH A+ L
Sbjct: 494 VLAVAMGSNSEYCYSGGADACIHSWKIPDLSMDPYDGYDPS---VLSHVLEGHGDAVWGL 550
Query: 364 CLAVVSNLLFSGSSDNTIRIWRRSSS 389
+ S L S S+D T+RIW SSS
Sbjct: 551 AFSPTSQRLASCSADGTVRIWDPSSS 576
Score = 105 (42.0 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 44/173 (25%), Positives = 67/173 (38%)
Query: 176 IATLPTLNDRFTKCFLANNYVQVRR--HKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRT 233
+A L ND C L+++ ++ + K T H D + S D T
Sbjct: 402 LADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSALLTASEDGT 461
Query: 234 FKIWRTSDFRCLESVKNAHDDA--INAI---------VVSKSNDGFVYTGSADTKIKVWK 282
K+W + + + KNA D I+A V SN + Y+G AD I WK
Sbjct: 462 LKLWNLQ--KAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSWK 519
Query: 283 KLRAALQVNKKHS---LVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWE 332
++ + L LE H AV LA S L S + D ++ +W+
Sbjct: 520 IPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVRIWD 572
Score = 72 (30.4 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 358 HTKAILCLAVVSN--LLFSGSSDNTIRIWRRSSS-----VTDHQKGYS-CLAVLEGHRRP 409
H A+ CLAV N L SGS D ++R+W + +T H+K + + + H P
Sbjct: 678 HLDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACH--P 735
Query: 410 VKCLTAVVDSD 420
K L A +D
Sbjct: 736 SKALIASAGAD 746
Score = 49 (22.3 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 389 SVTDHQ-KGYSCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIW 447
++T H +G L G +PV + A +D+ + D + +FL+ SGS DC +++W
Sbjct: 652 TITAHDDRGIRFLDNRTG--KPVHSMVAHLDA-VTCLAVDPNG-AFLM-SGSHDCSLRLW 706
Query: 448 QI 449
+
Sbjct: 707 SL 708
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 132 (51.5 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 43/159 (27%), Positives = 74/159 (46%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S+D+T K+W +C + + H I + + + V TGS DT K+W +
Sbjct: 154 SFDKTCKLWSVETGKCYHTFRG-HTAEIVCLSFNPQST-LVATGSMDTTAKLWD-----I 206
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
Q ++ V TL H + + +L+ +T G + +G+ D ++ VWE D G +
Sbjct: 207 QSGEE---VFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVY-------- 255
Query: 349 MVLKGALRGHTKAILCLAVVS---NLLFSGSSDNTIRIW 384
L GH A + AV + +L+ +GS D T ++W
Sbjct: 256 -----TLIGHC-AEISSAVFNWDCSLILTGSMDKTCKLW 288
Score = 129 (50.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 41/159 (25%), Positives = 71/159 (44%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S D+T K+W + +C+ ++ HDD I + + T SAD +++ AA
Sbjct: 280 SMDKTCKLWDAVNGKCVATL-TGHDDEILDSCFDYTGK-LIATASADGTARIFS---AAT 334
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
+ V LE H+ ++ ++ + G L +G+ D++ +W+ G +
Sbjct: 335 R-----ECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQ-------- 381
Query: 349 MVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWR 385
L GHT I A +++ +GS DNT RIWR
Sbjct: 382 -----VLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIWR 415
Score = 104 (41.7 bits), Expect = 9.0e-08, Sum P(3) = 9.0e-08
Identities = 26/111 (23%), Positives = 53/111 (47%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S+DRT K+W T+ L +++ H + + AI + + TGS D K+W ++
Sbjct: 111 SYDRTCKLWDTASGEELHTLEG-HRNVVYAIAFNNPYGDKIATGSFDKTCKLW-----SV 164
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYI 339
+ K + T H + + L+ + T++ +G+ D + +W+ G +
Sbjct: 165 ETGKCY---HTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEV 212
Score = 78 (32.5 bits), Expect = 9.0e-08, Sum P(3) = 9.0e-08
Identities = 24/54 (44%), Positives = 27/54 (50%)
Query: 355 LRGHTKAILCLAV--VSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
L GH I ++ N L +GSSD T RIW D Q G CL VLEGH
Sbjct: 341 LEGHEGEISKISFNPQGNRLLTGSSDKTARIW-------DAQTG-QCLQVLEGH 386
Score = 67 (28.6 bits), Expect = 0.00082, Sum P(3) = 0.00082
Identities = 42/225 (18%), Positives = 83/225 (36%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYSTSG---KLKNKYYERIATLPTLNDRFTKCFLAN 193
GDK+ + D ++W ++ Y++ G ++ + +TL T L +
Sbjct: 147 GDKIATGSFDKTCKLWSVETG-KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Query: 194 NYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHD 253
+Q + T H + S+D T +W R + ++ H
Sbjct: 206 --IQ-SGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIG-HC 261
Query: 254 DAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA---ALQVNKKHSLVQTLEKHKSAVTAL 310
I++ V + + + TGS D K+W + A ++ + + + A
Sbjct: 262 AEISSAVFNW-DCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIAT 320
Query: 311 ALSTDGTV-LYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGA 354
A S DGT ++S A + E +G + G+ +L G+
Sbjct: 321 A-SADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGS 364
Score = 52 (23.4 bits), Expect = 9.0e-08, Sum P(3) = 9.0e-08
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 103 DPNNYVNITSTDVGDHANVVATGNGDAVKSLVV-LGDKLFSAHQDHKIRVWKI 154
DP+ V+ ++ ++ D VK L+ L +KL H +HK ++K+
Sbjct: 36 DPSTDVSALVEEIQKAEPLITASRSDQVKLLIQRLQNKL-GQHSNHKFYLFKV 87
Score = 38 (18.4 bits), Expect = 0.00082, Sum P(3) = 0.00082
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 434 LVYSGSLDCEIKIW 447
L+ +GS+D K+W
Sbjct: 275 LILTGSMDKTCKLW 288
>UNIPROTKB|F8VYA6 [details] [associations]
symbol:STRN4 "Striatin-4" species:9606 "Homo sapiens"
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0043197
"dendritic spine" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043197 InterPro:IPR013258 Pfam:PF08232
EMBL:AC008622 EMBL:AC008635 RefSeq:NP_001034966.1 UniGene:Hs.631590
GeneID:29888 KEGG:hsa:29888 CTD:29888 HGNC:HGNC:15721 ChiTaRS:STRN4
GenomeRNAi:29888 NextBio:52431 OMA:RPHEGSF IPI:IPI00741970
ProteinModelPortal:F8VYA6 SMR:F8VYA6 PRIDE:F8VYA6
Ensembl:ENST00000391910 UCSC:uc002pfm.3 ArrayExpress:F8VYA6
Bgee:F8VYA6 Uniprot:F8VYA6
Length = 760
Score = 151 (58.2 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 47/146 (32%), Positives = 67/146 (45%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEKHKSA 306
+H D I ++ S + T S D +K+W L+ A+ K +L + H+
Sbjct: 443 SHYDGIRSLAFHHSQSALL-TASEDGTLKLWN-LQKAVTAKKNAALDVEPIHAFRAHRGP 500
Query: 307 VTALALSTDGTVLYSGACDRSILVWE-RDQGNYIVDGDDDSGHMVLKGALRGHTKAI--L 363
V A+A+ ++ YSG D I W+ D DG D S VL L GH A+ L
Sbjct: 501 VLAVAMGSNSEYCYSGGADACIHSWKIPDLSMDPYDGYDPS---VLSHVLEGHGDAVWGL 557
Query: 364 CLAVVSNLLFSGSSDNTIRIWRRSSS 389
+ S L S S+D T+RIW SSS
Sbjct: 558 AFSPTSQRLASCSADGTVRIWDPSSS 583
Score = 105 (42.0 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 44/173 (25%), Positives = 67/173 (38%)
Query: 176 IATLPTLNDRFTKCFLANNYVQVRR--HKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRT 233
+A L ND C L+++ ++ + K T H D + S D T
Sbjct: 409 LADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSALLTASEDGT 468
Query: 234 FKIWRTSDFRCLESVKNAHDDA--INAI---------VVSKSNDGFVYTGSADTKIKVWK 282
K+W + + + KNA D I+A V SN + Y+G AD I WK
Sbjct: 469 LKLWNLQ--KAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSWK 526
Query: 283 KLRAALQVNKKHS---LVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWE 332
++ + L LE H AV LA S L S + D ++ +W+
Sbjct: 527 IPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVRIWD 579
Score = 72 (30.4 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 358 HTKAILCLAVVSN--LLFSGSSDNTIRIWRRSSS-----VTDHQKGYS-CLAVLEGHRRP 409
H A+ CLAV N L SGS D ++R+W + +T H+K + + + H P
Sbjct: 685 HLDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACH--P 742
Query: 410 VKCLTAVVDSD 420
K L A +D
Sbjct: 743 SKALIASAGAD 753
Score = 49 (22.3 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 389 SVTDHQ-KGYSCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIW 447
++T H +G L G +PV + A +D+ + D + +FL+ SGS DC +++W
Sbjct: 659 TITAHDDRGIRFLDNRTG--KPVHSMVAHLDA-VTCLAVDPNG-AFLM-SGSHDCSLRLW 713
Query: 448 QI 449
+
Sbjct: 714 SL 715
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 155 (59.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 49/169 (28%), Positives = 78/169 (46%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQV 290
D+T ++W T R + + H+ ++ + N +V+TGS+D +++W A+
Sbjct: 382 DKTARLWVTDHIR-QQRIFVGHEQDVDCVCFHP-NSAYVFTGSSDRTVRMW-----AVTT 434
Query: 291 NKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMV 350
+ V+ H +TALA S DG L S SIL+W+ G +
Sbjct: 435 G---NAVRMFTGHTGNITALACSRDGKTLASADDHGSILLWDLGPGR------------L 479
Query: 351 LKGALRGHTKA---ILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKG 396
LK +RGH K L +V SN+L SG +D T+R+W D +G
Sbjct: 480 LK-RMRGHGKGGIWSLSWSVESNVLVSGGADGTVRVWDVMGPAHDPSQG 527
Score = 41 (19.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 140 LFSAHQDHKIRVWKID 155
L S+ D IR+W +D
Sbjct: 334 LLSSSADRTIRLWSLD 349
Score = 40 (19.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 128 DAVKSLVVLGDKLFSAH--QDHKIRVWKID 155
D + L D L A Q+ IRVW +D
Sbjct: 254 DGINCLDFSDDNLLVAAGMQESYIRVWSLD 283
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 138 (53.6 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 52/210 (24%), Positives = 87/210 (41%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
H D+V S D T K+W F C+ ++ + HD ++++ + + D
Sbjct: 149 HTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
V + S D IK+W +V + V+T H+ V + + DGT++ S + D+++
Sbjct: 208 V-SASRDKTIKMW-------EVATGYC-VKTFTGHREWVRMVRPNQDGTLIASSSNDQTV 258
Query: 329 LVW---------ERDQGNYIVD---GDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGS 376
VW E + ++V+ +S H + A TK L SGS
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKS---GKPGPFLLSGS 315
Query: 377 SDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
D TI++W S + CL L GH
Sbjct: 316 RDKTIKMWDVSIGM--------CLMTLVGH 337
Score = 126 (49.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 54/228 (23%), Positives = 95/228 (41%)
Query: 229 SWDRTFKIW--RTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
S D T K+W T DF E H D++ I + + + SAD IK+W
Sbjct: 127 SEDATIKVWDHETGDF---ERTLKGHTDSVQDISFDHTGK-LLASCSADMTIKLWDF--- 179
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
+ ++T+ H V+++A+ +G + S + D++I +WE G Y V +
Sbjct: 180 -----QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATG-YCVK--TFT 231
Query: 347 GHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW-----RRSSSVTDHQKGYSCLA 401
GH +R + L+ S S+D T+R+W + + +H+ C++
Sbjct: 232 GHREWVRMVRPNQDG--------TLIASSSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 402 VLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
P ++++ S FL+ SGS D IK+W +
Sbjct: 284 WAPESAHPT-----ILEATGSETKKSGKPGPFLL-SGSRDKTIKMWDV 325
Score = 52 (23.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 411 KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+C + ++ + D T+ V +GS+D +K+W+ R
Sbjct: 371 RCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 38 (18.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 140 LFSAHQDHKIRVWKIDNNTSAYYST 164
+ SA +D I+VW D+ T + T
Sbjct: 123 IVSASEDATIKVW--DHETGDFERT 145
>TAIR|locus:2061997 [details] [associations]
symbol:AT2G47410 "AT2G47410" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0009630 "gravitropism"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
EMBL:CP002685 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0080008
KO:K11797 IPI:IPI00537086 RefSeq:NP_850474.3 UniGene:At.36365
ProteinModelPortal:F4IL43 PRIDE:F4IL43 EnsemblPlants:AT2G47410.1
GeneID:819354 KEGG:ath:AT2G47410 OMA:CDSSMIP Uniprot:F4IL43
Length = 1520
Score = 157 (60.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 56/190 (29%), Positives = 85/190 (44%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQV 290
DR KIW CL S + H+ I + VS SN+ V + S D I+VW+ L + +
Sbjct: 257 DRLVKIWSMETALCLASCRG-HEGDITDLAVS-SNNALVASASNDFVIRVWR-LPDGMPI 313
Query: 291 NKKHSLVQTLEKHKSAVTALALSTDGTVLY---SGACDRSILVWERDQGNYI----VDGD 343
+ L H AVTA+A S +Y S + D + +W+ ++ V
Sbjct: 314 S-------VLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLPRIYVPSP 366
Query: 344 DDSGHMVLKGALRGHTKAILCLAVVSN--LLFSGSSDNTIRIWRRSS-SVTDHQKGYSCL 400
D+ A + H ILC A +N + +GSSD+ R+W S ++ D ++ L
Sbjct: 367 SDANTGSTSNASQSHQ--ILCCAYNANGTIFVTGSSDSNARVWSASKPNLDDAEQPTHEL 424
Query: 401 AVLEGHRRPV 410
VL GH V
Sbjct: 425 DVLRGHENDV 434
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 51/185 (27%), Positives = 88/185 (47%)
Query: 231 DRTFKIWRTSDF-RCLES--VKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
D+T ++W SD R + + + H I + S ++ + S DT + VW K
Sbjct: 35 DKTIRVWNKSDTDRWVAQTVLTDGHTRTIRELAWSCCGH-YLASASFDTTVAVWDKKSGE 93
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSG 347
+ N TLE H + V ++ S G +L + + D+S+ +WE ++ D +D+
Sbjct: 94 FECNA------TLEGHDNEVKSVTWSRSGNLLATCSRDKSVWIWEI---HHAPDQEDEYE 144
Query: 348 HMVLKGALRGHTKAI--LCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEG 405
+ + L GHT+ + +C +LL S S DNTIR++R+ + D + + L LE
Sbjct: 145 CVAV---LNGHTQDVKKVCWHPQEDLLASASYDNTIRMYRQD--LADSE--WEMLEPLES 197
Query: 406 HRRPV 410
H V
Sbjct: 198 HSSTV 202
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 47/213 (22%), Positives = 98/213 (46%)
Query: 241 DFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTL 300
++ C+ +V N H + + D + + S D I+++++ A + + +++ L
Sbjct: 142 EYECV-AVLNGHTQDVKKVCWHPQED-LLASASYDNTIRMYRQDLA----DSEWEMLEPL 195
Query: 301 EKHKSAVTALALSTDGTVLYSGACDRSILVWER-DQGNYIVDGDDDSGHM-VLKGALRG- 357
E H S V +++ G L S + D ++ VW++ N + D G + L G
Sbjct: 196 ESHSSTVWSISFDATGQRLASCSEDTTVKVWQQYGPDNALGIPCPDRGTIWKCVCTLSGY 255
Query: 358 HTKAILCL--AVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTA 415
H++++ + + LL + D+T+RI+R +S ++ + + +E H
Sbjct: 256 HSRSVYDIDWCKQTGLLATACGDDTVRIFREASDSDRNEPTFELVVTVEAH--------- 306
Query: 416 VVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQ 448
S +N+ + H + L+ + S D EIK+WQ
Sbjct: 307 ---SQDANKVAWHPTVPGLLLTASDDGEIKLWQ 336
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 135 (52.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 51/210 (24%), Positives = 88/210 (41%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
H D+V S D T K+W F C+ ++ + HD ++++ + + D
Sbjct: 84 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 142
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
V + S D IK+W+ +Q V+T H+ V + + DGT++ S + D+++
Sbjct: 143 V-SASRDKTIKMWE-----VQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 193
Query: 329 LVW---------ERDQGNYIVD---GDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGS 376
VW E + ++V+ +S + + A TK L SGS
Sbjct: 194 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKS---GKPGPFLLSGS 250
Query: 377 SDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
D TI++W S+ + CL L GH
Sbjct: 251 RDKTIKMWDVSTGM--------CLMTLVGH 272
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 55/228 (24%), Positives = 96/228 (42%)
Query: 229 SWDRTFKIW--RTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
S D T K+W T DF E H D++ I S + + SAD IK+W
Sbjct: 62 SEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDF--- 114
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
+ ++T+ H V+++A+ +G + S + D++I +WE G Y V +
Sbjct: 115 -----QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG-YCVK--TFT 166
Query: 347 GHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW-----RRSSSVTDHQKGYSCLA 401
GH +R + L+ S S+D T+R+W + + +H+ C++
Sbjct: 167 GHREWVRMVRPNQDG--------TLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 218
Query: 402 VLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
P +++ ++ S FL+ SGS D IK+W +
Sbjct: 219 WA-----PESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDV 260
Score = 114 (45.2 bits), Expect = 0.00089, P = 0.00089
Identities = 59/283 (20%), Positives = 120/283 (42%)
Query: 71 VKGNSSYIPSLAI--AGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGD 128
+KG++ + ++ +GKLL S++ I+ W D + I + DH NV +
Sbjct: 81 LKGHTDSVQDISFDHSGKLLASCSADMTIKLW--DFQGFECIRTMHGHDH-NVSSV---- 133
Query: 129 AVKSLVVLGDKLFSAHQDHKIRVWKIDNNTSAYYSTSGK--LKNKYYERIATL--PTLND 184
+++ GD + SA +D I++W++ T + ++ + TL ND
Sbjct: 134 ---AIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 190
Query: 185 RFTKCFLANNY---VQVRRHK---KC-TWVHH--VDTVXXXXXXXXXXXXX------XTS 229
+ + ++ ++R H+ +C +W ++ S
Sbjct: 191 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 250
Query: 230 WDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQ 289
D+T K+W S CL ++ HD+ + ++ S F+ + + D ++VW
Sbjct: 251 RDKTIKMWDVSTGMCLMTLVG-HDNWVRGVLFH-SGGKFILSCADDKTLRVWD------Y 302
Query: 290 VNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWE 332
NK+ ++TL H+ VT+L + +G+ D+++ VWE
Sbjct: 303 KNKR--CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 54 (24.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 411 KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+C+ + ++ + D T+ V +GS+D +K+W+ R
Sbjct: 306 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 149 (57.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 59/228 (25%), Positives = 98/228 (42%)
Query: 229 SWDRTFKIW--RTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
S D T +IW T ++ S+K H D++ + + + SAD IK+W
Sbjct: 127 SEDATIRIWDFETGEYE--RSLKG-HTDSVQDVAFDAQGK-LLASCSADLSIKLW----- 177
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
+ + ++T+ H V+++A G + S + DR+I +WE G Y V +
Sbjct: 178 --DFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATG-YCVK--TYT 232
Query: 347 GHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSS-----VTDHQKGYSCLA 401
GH +R H + + A SN D TIR+W +S + DH+ C+A
Sbjct: 233 GHREWVRMVRVHIEGSI-FATCSN-------DQTIRVWLTNSKDCKVELRDHEHTVECIA 284
Query: 402 VLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
P +A+ ++ ++ H FL SGS D I+IW +
Sbjct: 285 WA-----PEAAASAINEAAGADNKKGHHQGPFLA-SGSRDKTIRIWDV 326
Score = 125 (49.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 64/283 (22%), Positives = 119/283 (42%)
Query: 71 VKGNSSYIPSLAI--AGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGD 128
+KG++ + +A GKLL S++ I+ W+ +Y I + DH NV +
Sbjct: 146 LKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ-QSYECIKTMHGHDH-NVSSV---- 199
Query: 129 AVKSLVVLGDKLFSAHQDHKIRVWKIDNNTSAYYSTSGK----LKNKYYERIATLPTLND 184
+ V GD + SA +D I++W++ T + + + E ND
Sbjct: 200 ---AFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSND 256
Query: 185 RFTKCFLANNY---VQVRRHK---KC-TW--------VHHVDTVXXXXXXXXXXXXXXTS 229
+ + +L N+ V++R H+ +C W ++ S
Sbjct: 257 QTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGS 316
Query: 230 WDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQ 289
D+T +IW S CL ++ + HD+ + + ++ + S D I+VW LR
Sbjct: 317 RDKTIRIWDVSVGLCLLTL-SGHDNWVRGLAFHPGGK-YLVSASDDKTIRVWD-LR---- 369
Query: 290 VNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWE 332
NK+ ++TL H+ T++ + SG+ D+++ VWE
Sbjct: 370 -NKR--CMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 137 (53.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 51/210 (24%), Positives = 88/210 (41%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
H D+V S D T K+W F C+ ++ + HD ++++ + + D
Sbjct: 149 HTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
V + S D IK+W+ +Q V+T H+ V + + DGT++ S + D+++
Sbjct: 208 V-SASRDKTIKMWE-----VQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 329 LVW---------ERDQGNYIVD---GDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGS 376
VW E + ++V+ +S + + A TK L SGS
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKS---GKPGPFLLSGS 315
Query: 377 SDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
D TI++W S+ + CL L GH
Sbjct: 316 RDKTIKMWDISTGM--------CLMTLVGH 337
Score = 125 (49.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 55/228 (24%), Positives = 95/228 (41%)
Query: 229 SWDRTFKIW--RTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
S D T K+W T DF E H D++ I + + + SAD IK+W
Sbjct: 127 SEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHTGK-LLASCSADMTIKLWDF--- 179
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
+ ++T+ H V+++A+ +G + S + D++I +WE G Y V +
Sbjct: 180 -----QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG-YCVK--TFT 231
Query: 347 GHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW-----RRSSSVTDHQKGYSCLA 401
GH +R + L+ S S+D T+R+W + + +H+ C++
Sbjct: 232 GHREWVRMVRPNQDG--------TLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 402 VLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
P + + ++ S FL+ SGS D IK+W I
Sbjct: 284 WA-----PESSYSTISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDI 325
Score = 54 (24.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 411 KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+C+ + ++ + D T+ V +GS+D +K+W+ R
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 67/293 (22%), Positives = 118/293 (40%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYV 196
G L S D KIR+W + ++ S + + ++A P N + F A +
Sbjct: 28 GTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCI 87
Query: 197 QVRRHK--KC--TWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSD---FRCLESVK 249
+ +C T H + V S D++ +W + + C+ SV
Sbjct: 88 WKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECV-SVL 146
Query: 250 NAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTA 309
N+H + +V S + + + S D +K+++ + TLE H+S V +
Sbjct: 147 NSHTQDVKHVVWHPSQE-LLASASYDDTVKLYQ------EEGDDWVCCATLEGHESTVWS 199
Query: 310 LALSTDGTVLYSGACDRSILVWER-----DQGNYIVDGDDDSGHMVLKGALRG-HTKAIL 363
+A G L S + DR++ +W + +QG G D S V L G HT+ I
Sbjct: 200 IAFDPSGQRLASCSDDRTVRIWRQYLPGNEQG-VACSGSDPSWKCVC--TLSGFHTRTIY 256
Query: 364 CLA--VVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL-EGHRRPVKCL 413
+A ++ L + D+ IR++ Q +S A L + H + V C+
Sbjct: 257 DVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCV 309
>CGD|CAL0005182 [details] [associations]
symbol:orf19.5413 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005182 GO:GO:0005737 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
GO:GO:0007049 EMBL:AACQ01000051 EMBL:AACQ01000050 KO:K12862
RefSeq:XP_717691.1 RefSeq:XP_717785.1 ProteinModelPortal:Q5A7Q3
STRING:Q5A7Q3 GeneID:3640515 GeneID:3640625 KEGG:cal:CaO19.12868
KEGG:cal:CaO19.5413 Uniprot:Q5A7Q3
Length = 389
Score = 142 (55.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 41/153 (26%), Positives = 72/153 (47%)
Query: 240 SDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQT 299
++++ L ++ AH I AI + + + + TGSAD+ IK+W + +SL
Sbjct: 72 AEWKLLRTLAGAHQGWIRAIALDEITNKWYVTGSADSTIKIWDF--------ENNSLKAV 123
Query: 300 LEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHT 359
L H + +L +S L+SG D+S+ W+ ++ N D+G + + GH
Sbjct: 124 LTGHVLGIRSLCISKRHPYLFSGGEDKSLRCWDLERSN------SDAGCQIR--SYHGHL 175
Query: 360 KAILCLAVVSNL--LFSGSSDNTIRIWRRSSSV 390
+ + + L LFSG D +R+W S V
Sbjct: 176 GGVYSIGLHPELDVLFSGGKDCVVRVWDIRSRV 208
Score = 117 (46.2 bits), Expect = 0.00051, P = 0.00051
Identities = 45/174 (25%), Positives = 76/174 (43%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S D T KIW + L++V H I ++ +SK + ++++G D ++ W R+
Sbjct: 105 SADSTIKIWDFEN-NSLKAVLTGHVLGIRSLCISKRHP-YLFSGGEDKSLRCWDLERSNS 162
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
+ +++ H V ++ L + VL+SG D + VW D
Sbjct: 163 DAGCQ---IRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVW-------------DIRS 206
Query: 349 MVLKGALRGHTKAILCLAVVSN--LLFSGSSDNTIRIW--RRSSS---VTDHQK 395
V L GHT I + N + + S D TIR+W R+S + +T+H K
Sbjct: 207 RVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKSKTELLITNHSK 260
Score = 47 (21.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 13/56 (23%), Positives = 29/56 (51%)
Query: 396 GYSCLAVLEGHRRPVKCLTAVVDS-DYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
G C+ + R V+ +T + + D ++ +D++ V + S+D I++W +R
Sbjct: 194 GKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQ--VITSSMDGTIRLWDLR 247
>UNIPROTKB|Q5A7Q3 [details] [associations]
symbol:PRP46 "Pre-mRNA-splicing factor PRP46"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005182 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0005681 GO:GO:0007049 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K12862 RefSeq:XP_717691.1 RefSeq:XP_717785.1
ProteinModelPortal:Q5A7Q3 STRING:Q5A7Q3 GeneID:3640515
GeneID:3640625 KEGG:cal:CaO19.12868 KEGG:cal:CaO19.5413
Uniprot:Q5A7Q3
Length = 389
Score = 142 (55.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 41/153 (26%), Positives = 72/153 (47%)
Query: 240 SDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQT 299
++++ L ++ AH I AI + + + + TGSAD+ IK+W + +SL
Sbjct: 72 AEWKLLRTLAGAHQGWIRAIALDEITNKWYVTGSADSTIKIWDF--------ENNSLKAV 123
Query: 300 LEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHT 359
L H + +L +S L+SG D+S+ W+ ++ N D+G + + GH
Sbjct: 124 LTGHVLGIRSLCISKRHPYLFSGGEDKSLRCWDLERSN------SDAGCQIR--SYHGHL 175
Query: 360 KAILCLAVVSNL--LFSGSSDNTIRIWRRSSSV 390
+ + + L LFSG D +R+W S V
Sbjct: 176 GGVYSIGLHPELDVLFSGGKDCVVRVWDIRSRV 208
Score = 117 (46.2 bits), Expect = 0.00051, P = 0.00051
Identities = 45/174 (25%), Positives = 76/174 (43%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S D T KIW + L++V H I ++ +SK + ++++G D ++ W R+
Sbjct: 105 SADSTIKIWDFEN-NSLKAVLTGHVLGIRSLCISKRHP-YLFSGGEDKSLRCWDLERSNS 162
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
+ +++ H V ++ L + VL+SG D + VW D
Sbjct: 163 DAGCQ---IRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVW-------------DIRS 206
Query: 349 MVLKGALRGHTKAILCLAVVSN--LLFSGSSDNTIRIW--RRSSS---VTDHQK 395
V L GHT I + N + + S D TIR+W R+S + +T+H K
Sbjct: 207 RVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKSKTELLITNHSK 260
Score = 47 (21.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 13/56 (23%), Positives = 29/56 (51%)
Query: 396 GYSCLAVLEGHRRPVKCLTAVVDS-DYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
G C+ + R V+ +T + + D ++ +D++ V + S+D I++W +R
Sbjct: 194 GKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQ--VITSSMDGTIRLWDLR 247
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 57/195 (29%), Positives = 85/195 (43%)
Query: 205 TWVHHVDTVXXXXXXXXXXXXXXT-SWDRTFKIWRT---SDFRCLESVKNAHDDAINAIV 260
T+ HH V T S D T +I T R + + H DAINAI
Sbjct: 209 TYTHHSSIVNDVQHHPLHSSLIGTVSDDITLQILDTRVAETTRAAATAEGQHRDAINAIA 268
Query: 261 VSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALST-DGTVL 319
+ + + + TGSAD I +W LR N K L TLE H +VT+++ + VL
Sbjct: 269 FNPAAETVLATGSADKTIGLWD-LR-----NLKTKL-HTLENHTDSVTSISWHPFEEAVL 321
Query: 320 YSGACDRSILVWERDQ-GNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN---LLFSG 375
S + DR I+ W+ + G D G L GHT I + N +L S
Sbjct: 322 ASASYDRKIMFWDLSRAGEEQTPEDAQDGPPELLFMHGGHTNRISDFSWNLNDPWVLCSA 381
Query: 376 SSDNTIRIWRRSSSV 390
+ DN +++W+ + ++
Sbjct: 382 AEDNLLQVWKVADAI 396
>CGD|CAL0005179 [details] [associations]
symbol:orf19.5410 species:5476 "Candida albicans" [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005179 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000922 GO:GO:0005874 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K01062 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 RefSeq:XP_717688.1
RefSeq:XP_717782.1 ProteinModelPortal:Q5A7Q6 STRING:Q5A7Q6
GeneID:3640588 GeneID:3640622 KEGG:cal:CaO19.12865
KEGG:cal:CaO19.5410 Uniprot:Q5A7Q6
Length = 486
Score = 120 (47.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 48/198 (24%), Positives = 83/198 (41%)
Query: 151 VWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYVQVRRHKKCTWV--- 207
V K+DN +ST +L+ K + + LN+ NN + + + K W+
Sbjct: 54 VEKVDNYLEKRWSTVLRLQKKIIDLENEISNLNNIINSTNSDNNGIILSKDK-INWIPKG 112
Query: 208 -----HHVDTVXXXXXXXXXXXXXXTSW-DRTFKIWRTS--DFRCLESVKNAHDDAINAI 259
+ + + D IW S D E + AH AIN I
Sbjct: 113 AVKQSYQCENIVTTVKLHPNLPLVLNGCNDGNLYIWNISNDDNTIPEKMIKAHTRAINKI 172
Query: 260 VVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALS-TDGTV 318
+ ++ T S+D IK+W ++K + ++TL H+ V+++ S D ++
Sbjct: 173 CFTYKKPYYLATCSSDLTIKIW---------DEKFNHIRTLNGHEHTVSSIQFSPVDNSI 223
Query: 319 LYSGACDRSILVWERDQG 336
LYS + D++I VW+ QG
Sbjct: 224 LYSVSRDKNIRVWDIFQG 241
Score = 73 (30.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 29/102 (28%), Positives = 42/102 (41%)
Query: 355 LRGHTKAILCLAVVSN--LLFSGSSDNTIRIWRRSSSVTDHQKGY-SCLAVLEGHR---R 408
L+GH+ + L V N + SGS D TI+ W S + + GY + + + GH
Sbjct: 387 LKGHSSWVKSLCVHPNGKFIISGSDDKTIKFWDLSGLL---ETGYVNVVKTIIGHDGFIN 443
Query: 409 PVKCLTAVVDSDYSNRN---SDHSSTSFLVYSGSLDCEIKIW 447
+ SD S + L SGS D IK+W
Sbjct: 444 DIDFARLKEASDVSEEDLLKQVEKRMRCLFISGSADNSIKLW 485
Score = 53 (23.7 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 21/78 (26%), Positives = 34/78 (43%)
Query: 374 SGSSDNTIRIWR-RSSSVTDHQ----KGYS-----CLAVLEGHRRPVKCLTAVVDSDYSN 423
+ S DNTI++W ++ H+ Y+ +A L+GH VK L + +
Sbjct: 348 TASRDNTIKLWLIPPPTIAPHRPPLPSKYNNSQSWLIAELKGHSSWVKSLCVHPNGKFII 407
Query: 424 RNSDHSSTSFLVYSGSLD 441
SD + F SG L+
Sbjct: 408 SGSDDKTIKFWDLSGLLE 425
>RGD|1307030 [details] [associations]
symbol:Strn4 "striatin, calmodulin binding protein 4"
species:10116 "Rattus norvegicus" [GO:0008150 "biological_process"
evidence=ND] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0032403 "protein complex binding"
evidence=ISO;IPI] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0051721 "protein
phosphatase 2A binding" evidence=ISO] [GO:0070016 "armadillo repeat
domain binding" evidence=ISO] [GO:0000159 "protein phosphatase type
2A complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307030 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043197 InterPro:IPR013258
Pfam:PF08232 GeneTree:ENSGT00520000055597 CTD:29888 OMA:RPHEGSF
IPI:IPI00213355 RefSeq:NP_001100950.2 UniGene:Rn.137083
ProteinModelPortal:F1M6V8 PRIDE:F1M6V8 Ensembl:ENSRNOT00000021976
GeneID:308392 KEGG:rno:308392 UCSC:RGD:1307030 NextBio:658751
ArrayExpress:F1M6V8 Uniprot:F1M6V8
Length = 759
Score = 149 (57.5 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 51/157 (32%), Positives = 70/157 (44%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEKHKSA 306
+H D I ++ S + T S D +K+W L+ A+ K +L + H+
Sbjct: 442 SHYDGIRSLAFHHSQSALL-TASEDGTLKLWN-LQKAVTAKKNAALDVEPIHAFRAHRGP 499
Query: 307 VTALALSTDGTVLYSGACDRSILVWERDQGNYI-VDGDDDSGHMVLKGALRGHTKAI--L 363
V A+ + ++ YSG D I W+ N DG D S VL L GH A+ L
Sbjct: 500 VLAVTMGSNSEYCYSGGADARIHSWKIPDLNMDPYDGYDPS---VLSCVLEGHGDAVWGL 556
Query: 364 CLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCL 400
+ S L S S+D TIRIW SSS G SCL
Sbjct: 557 AFSPTSQRLASCSADGTIRIWDPSSS------GSSCL 587
Score = 107 (42.7 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 46/173 (26%), Positives = 68/173 (39%)
Query: 176 IATLPTLNDRFTKCFLANNYVQVRR--HKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRT 233
+A L ND C L+++ ++ + K T H D + S D T
Sbjct: 408 LADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSALLTASEDGT 467
Query: 234 FKIWRTSDFRCLESVKNAHDDA--INAI---------VVSKSNDGFVYTGSADTKIKVWK 282
K+W + + + KNA D I+A V SN + Y+G AD +I WK
Sbjct: 468 LKLWNLQ--KAVTAKKNAALDVEPIHAFRAHRGPVLAVTMGSNSEYCYSGGADARIHSWK 525
Query: 283 --KLRAALQVNKKHSLVQ-TLEKHKSAVTALALSTDGTVLYSGACDRSILVWE 332
L S++ LE H AV LA S L S + D +I +W+
Sbjct: 526 IPDLNMDPYDGYDPSVLSCVLEGHGDAVWGLAFSPTSQRLASCSADGTIRIWD 578
Score = 73 (30.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 343 DDDSGHMVLKGALRGHTKAILCLAVVSN--LLFSGSSDNTIRIWRRSSS-----VTDHQK 395
D+ +G V ++ H A+ CLAV N L SGS D ++R+W + +T H+K
Sbjct: 671 DNRTGKSV--HSMVAHLDAVTCLAVDPNGVFLMSGSHDCSLRLWSLDNKTCVQEITAHRK 728
Query: 396 GYS-CLAVLEGHRRPVKCLTAVVDSD 420
+ + + H P K L A +D
Sbjct: 729 KHEEAIHAVACH--PSKALIASAGAD 752
Score = 47 (21.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 433 FLVYSGSLDCEIKIWQI 449
FL+ SGS DC +++W +
Sbjct: 699 FLM-SGSHDCSLRLWSL 714
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 135 (52.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 51/210 (24%), Positives = 88/210 (41%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
H D+V S D T K+W F C+ ++ + HD ++++ + + D
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
V + S D IK+W+ +Q V+T H+ V + + DGT++ S + D+++
Sbjct: 208 V-SASRDKTIKMWE-----VQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 329 LVW---------ERDQGNYIVD---GDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGS 376
VW E + ++V+ +S + + A TK L SGS
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKS---GKPGPFLLSGS 315
Query: 377 SDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
D TI++W S+ + CL L GH
Sbjct: 316 RDKTIKMWDVSTGM--------CLMTLVGH 337
Score = 128 (50.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 55/228 (24%), Positives = 96/228 (42%)
Query: 229 SWDRTFKIW--RTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
S D T K+W T DF E H D++ I S + + SAD IK+W
Sbjct: 127 SEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDF--- 179
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
+ ++T+ H V+++A+ +G + S + D++I +WE G Y V +
Sbjct: 180 -----QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG-YCVK--TFT 231
Query: 347 GHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW-----RRSSSVTDHQKGYSCLA 401
GH +R + L+ S S+D T+R+W + + +H+ C++
Sbjct: 232 GHREWVRMVRPNQDG--------TLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 402 VLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
P +++ ++ S FL+ SGS D IK+W +
Sbjct: 284 WA-----PESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDV 325
Score = 54 (24.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 411 KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+C+ + ++ + D T+ V +GS+D +K+W+ R
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 135 (52.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 51/210 (24%), Positives = 88/210 (41%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
H D+V S D T K+W F C+ ++ + HD ++++ + + D
Sbjct: 149 HTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
V + S D IK+W+ +Q V+T H+ V + + DGT++ S + D+++
Sbjct: 208 V-SASRDKTIKMWE-----VQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 329 LVW---------ERDQGNYIVD---GDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGS 376
VW E + ++V+ +S + + A TK L SGS
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKS---GKPGPFLLSGS 315
Query: 377 SDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
D TI++W S+ + CL L GH
Sbjct: 316 RDKTIKMWDVSTGM--------CLMTLVGH 337
Score = 128 (50.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 55/228 (24%), Positives = 96/228 (42%)
Query: 229 SWDRTFKIW--RTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
S D T K+W T DF E H D++ I S + + SAD IK+W
Sbjct: 127 SEDATIKVWDYETGDF---ERTLKGHTDSVEDISFDHSGK-LLASCSADMTIKLWDF--- 179
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
+ ++T+ H V+++A+ +G + S + D++I +WE G Y V +
Sbjct: 180 -----QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG-YCVK--TFT 231
Query: 347 GHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW-----RRSSSVTDHQKGYSCLA 401
GH +R + L+ S S+D T+R+W + + +H+ C++
Sbjct: 232 GHREWVRMVRPNQDG--------TLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 402 VLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
P +++ ++ S FL+ SGS D IK+W +
Sbjct: 284 WA-----PESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDV 325
Score = 54 (24.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 411 KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+C+ + ++ + D T+ V +GS+D +K+W+ R
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 135 (52.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 51/210 (24%), Positives = 88/210 (41%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
H D+V S D T K+W F C+ ++ + HD ++++ + + D
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
V + S D IK+W+ +Q V+T H+ V + + DGT++ S + D+++
Sbjct: 208 V-SASRDKTIKMWE-----VQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 329 LVW---------ERDQGNYIVD---GDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGS 376
VW E + ++V+ +S + + A TK L SGS
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKS---GKPGPFLLSGS 315
Query: 377 SDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
D TI++W S+ + CL L GH
Sbjct: 316 RDKTIKMWDVSTGM--------CLMTLVGH 337
Score = 128 (50.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 55/228 (24%), Positives = 96/228 (42%)
Query: 229 SWDRTFKIW--RTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
S D T K+W T DF E H D++ I S + + SAD IK+W
Sbjct: 127 SEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDF--- 179
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
+ ++T+ H V+++A+ +G + S + D++I +WE G Y V +
Sbjct: 180 -----QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG-YCVK--TFT 231
Query: 347 GHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW-----RRSSSVTDHQKGYSCLA 401
GH +R + L+ S S+D T+R+W + + +H+ C++
Sbjct: 232 GHREWVRMVRPNQDG--------TLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 402 VLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
P +++ ++ S FL+ SGS D IK+W +
Sbjct: 284 WA-----PESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDV 325
Score = 54 (24.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 411 KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+C+ + ++ + D T+ V +GS+D +K+W+ R
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 135 (52.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 51/210 (24%), Positives = 88/210 (41%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
H D+V S D T K+W F C+ ++ + HD ++++ + + D
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
V + S D IK+W+ +Q V+T H+ V + + DGT++ S + D+++
Sbjct: 208 V-SASRDKTIKMWE-----VQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 329 LVW---------ERDQGNYIVD---GDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGS 376
VW E + ++V+ +S + + A TK L SGS
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKS---GKPGPFLLSGS 315
Query: 377 SDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
D TI++W S+ + CL L GH
Sbjct: 316 RDKTIKMWDVSTGM--------CLMTLVGH 337
Score = 128 (50.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 55/228 (24%), Positives = 96/228 (42%)
Query: 229 SWDRTFKIW--RTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
S D T K+W T DF E H D++ I S + + SAD IK+W
Sbjct: 127 SEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDF--- 179
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
+ ++T+ H V+++A+ +G + S + D++I +WE G Y V +
Sbjct: 180 -----QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG-YCVK--TFT 231
Query: 347 GHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW-----RRSSSVTDHQKGYSCLA 401
GH +R + L+ S S+D T+R+W + + +H+ C++
Sbjct: 232 GHREWVRMVRPNQDG--------TLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 402 VLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
P +++ ++ S FL+ SGS D IK+W +
Sbjct: 284 WA-----PESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDV 325
Score = 54 (24.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 411 KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+C+ + ++ + D T+ V +GS+D +K+W+ R
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 135 (52.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 51/210 (24%), Positives = 88/210 (41%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
H D+V S D T K+W F C+ ++ + HD ++++ + + D
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
V + S D IK+W+ +Q V+T H+ V + + DGT++ S + D+++
Sbjct: 208 V-SASRDKTIKMWE-----VQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 329 LVW---------ERDQGNYIVD---GDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGS 376
VW E + ++V+ +S + + A TK L SGS
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKS---GKPGPFLLSGS 315
Query: 377 SDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
D TI++W S+ + CL L GH
Sbjct: 316 RDKTIKMWDVSTGM--------CLMTLVGH 337
Score = 128 (50.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 55/228 (24%), Positives = 96/228 (42%)
Query: 229 SWDRTFKIW--RTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
S D T K+W T DF E H D++ I S + + SAD IK+W
Sbjct: 127 SEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDF--- 179
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
+ ++T+ H V+++A+ +G + S + D++I +WE G Y V +
Sbjct: 180 -----QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG-YCVK--TFT 231
Query: 347 GHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW-----RRSSSVTDHQKGYSCLA 401
GH +R + L+ S S+D T+R+W + + +H+ C++
Sbjct: 232 GHREWVRMVRPNQDG--------TLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 402 VLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
P +++ ++ S FL+ SGS D IK+W +
Sbjct: 284 WA-----PESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDV 325
Score = 54 (24.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 411 KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+C+ + ++ + D T+ V +GS+D +K+W+ R
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 135 (52.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 51/210 (24%), Positives = 88/210 (41%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
H D+V S D T K+W F C+ ++ + HD ++++ + + D
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
V + S D IK+W+ +Q V+T H+ V + + DGT++ S + D+++
Sbjct: 208 V-SASRDKTIKMWE-----VQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 329 LVW---------ERDQGNYIVD---GDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGS 376
VW E + ++V+ +S + + A TK L SGS
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKS---GKPGPFLLSGS 315
Query: 377 SDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
D TI++W S+ + CL L GH
Sbjct: 316 RDKTIKMWDVSTGM--------CLMTLVGH 337
Score = 128 (50.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 55/228 (24%), Positives = 96/228 (42%)
Query: 229 SWDRTFKIW--RTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
S D T K+W T DF E H D++ I S + + SAD IK+W
Sbjct: 127 SEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDF--- 179
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
+ ++T+ H V+++A+ +G + S + D++I +WE G Y V +
Sbjct: 180 -----QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG-YCVK--TFT 231
Query: 347 GHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW-----RRSSSVTDHQKGYSCLA 401
GH +R + L+ S S+D T+R+W + + +H+ C++
Sbjct: 232 GHREWVRMVRPNQDG--------TLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 402 VLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
P +++ ++ S FL+ SGS D IK+W +
Sbjct: 284 WA-----PESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDV 325
Score = 54 (24.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 411 KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+C+ + ++ + D T+ V +GS+D +K+W+ R
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 135 (52.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 51/210 (24%), Positives = 88/210 (41%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
H D+V S D T K+W F C+ ++ + HD ++++ + + D
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
V + S D IK+W+ +Q V+T H+ V + + DGT++ S + D+++
Sbjct: 208 V-SASRDKTIKMWE-----VQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 329 LVW---------ERDQGNYIVD---GDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGS 376
VW E + ++V+ +S + + A TK L SGS
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKS---GKPGPFLLSGS 315
Query: 377 SDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
D TI++W S+ + CL L GH
Sbjct: 316 RDKTIKMWDVSTGM--------CLMTLVGH 337
Score = 128 (50.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 55/228 (24%), Positives = 96/228 (42%)
Query: 229 SWDRTFKIW--RTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
S D T K+W T DF E H D++ I S + + SAD IK+W
Sbjct: 127 SEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDF--- 179
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
+ ++T+ H V+++A+ +G + S + D++I +WE G Y V +
Sbjct: 180 -----QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG-YCVK--TFT 231
Query: 347 GHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW-----RRSSSVTDHQKGYSCLA 401
GH +R + L+ S S+D T+R+W + + +H+ C++
Sbjct: 232 GHREWVRMVRPNQDG--------TLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 402 VLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
P +++ ++ S FL+ SGS D IK+W +
Sbjct: 284 WA-----PESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDV 325
Score = 54 (24.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 411 KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+C+ + ++ + D T+ V +GS+D +K+W+ R
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 135 (52.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 51/210 (24%), Positives = 88/210 (41%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
H D+V S D T K+W F C+ ++ + HD ++++ + + D
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
V + S D IK+W+ +Q V+T H+ V + + DGT++ S + D+++
Sbjct: 208 V-SASRDKTIKMWE-----VQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 329 LVW---------ERDQGNYIVD---GDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGS 376
VW E + ++V+ +S + + A TK L SGS
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKS---GKPGPFLLSGS 315
Query: 377 SDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
D TI++W S+ + CL L GH
Sbjct: 316 RDKTIKMWDVSTGM--------CLMTLVGH 337
Score = 128 (50.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 55/228 (24%), Positives = 96/228 (42%)
Query: 229 SWDRTFKIW--RTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
S D T K+W T DF E H D++ I S + + SAD IK+W
Sbjct: 127 SEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDF--- 179
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
+ ++T+ H V+++A+ +G + S + D++I +WE G Y V +
Sbjct: 180 -----QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG-YCVK--TFT 231
Query: 347 GHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW-----RRSSSVTDHQKGYSCLA 401
GH +R + L+ S S+D T+R+W + + +H+ C++
Sbjct: 232 GHREWVRMVRPNQDG--------TLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 402 VLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
P +++ ++ S FL+ SGS D IK+W +
Sbjct: 284 WA-----PESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDV 325
Score = 54 (24.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 411 KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+C+ + ++ + D T+ V +GS+D +K+W+ R
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 135 (52.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 51/210 (24%), Positives = 88/210 (41%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
H D+V S D T K+W F C+ ++ + HD ++++ + + D
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
V + S D IK+W+ +Q V+T H+ V + + DGT++ S + D+++
Sbjct: 208 V-SASRDKTIKMWE-----VQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 329 LVW---------ERDQGNYIVD---GDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGS 376
VW E + ++V+ +S + + A TK L SGS
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKS---GKPGPFLLSGS 315
Query: 377 SDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
D TI++W S+ + CL L GH
Sbjct: 316 RDKTIKMWDVSTGM--------CLMTLVGH 337
Score = 128 (50.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 55/228 (24%), Positives = 96/228 (42%)
Query: 229 SWDRTFKIW--RTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
S D T K+W T DF E H D++ I S + + SAD IK+W
Sbjct: 127 SEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDF--- 179
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
+ ++T+ H V+++A+ +G + S + D++I +WE G Y V +
Sbjct: 180 -----QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG-YCVK--TFT 231
Query: 347 GHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW-----RRSSSVTDHQKGYSCLA 401
GH +R + L+ S S+D T+R+W + + +H+ C++
Sbjct: 232 GHREWVRMVRPNQDG--------TLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 402 VLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
P +++ ++ S FL+ SGS D IK+W +
Sbjct: 284 WA-----PESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDV 325
Score = 54 (24.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 411 KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+C+ + ++ + D T+ V +GS+D +K+W+ R
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 145 (56.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 65/293 (22%), Positives = 120/293 (40%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYV 196
G L S D +IR+W + ++ S + + ++A P N + F A +
Sbjct: 28 GTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCI 87
Query: 197 QVRRHK--KC--TWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSD---FRCLESVK 249
+ +C T H + V S D++ +W + + C+ SV
Sbjct: 88 WKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECV-SVL 146
Query: 250 NAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTA 309
N+H + +V S + + + S D +K+++ + TLE H+S V +
Sbjct: 147 NSHTQDVKHVVWHPSQE-LLASASYDDTVKLYR------EEEDDWVCCATLEGHESTVWS 199
Query: 310 LALSTDGTVLYSGACDRSILVWER-----DQGNYIVDGDDDSGHMVLKGALRG-HTKAIL 363
LA G L S + DR++ +W + +QG G D S + L G H++ I
Sbjct: 200 LAFDPSGQRLASCSDDRTVRIWRQYLPGNEQG-VACSGSDPSWKCIC--TLSGFHSRTIY 256
Query: 364 CLA--VVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL-EGHRRPVKCL 413
+A ++ L + D+ IR+++ + Q +S A L + H + V C+
Sbjct: 257 DIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCV 309
>MGI|MGI:2142346 [details] [associations]
symbol:Strn4 "striatin, calmodulin binding protein 4"
species:10090 "Mus musculus" [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0051721 "protein phosphatase 2A binding"
evidence=ISO] [GO:0070016 "armadillo repeat domain binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2142346 GO:GO:0005737 GO:GO:0043234
GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043197 InterPro:IPR013258 Pfam:PF08232
GeneTree:ENSGT00520000055597 HOGENOM:HOG000236343
HOVERGEN:HBG007117 CTD:29888 EMBL:AF414080 EMBL:AC148981
EMBL:BC004025 EMBL:BC080283 IPI:IPI00119524 IPI:IPI01008021
RefSeq:NP_001034967.1 RefSeq:NP_598550.2 UniGene:Mm.21612
ProteinModelPortal:P58404 SMR:P58404 PhosphoSite:P58404
PaxDb:P58404 PRIDE:P58404 Ensembl:ENSMUST00000019220
Ensembl:ENSMUST00000108495 GeneID:97387 KEGG:mmu:97387
UCSC:uc009fif.2 InParanoid:P58404 OMA:RPHEGSF OrthoDB:EOG4R23TB
NextBio:352759 Bgee:P58404 CleanEx:MM_STRN4 Genevestigator:P58404
GermOnline:ENSMUSG00000030374 Uniprot:P58404
Length = 760
Score = 148 (57.2 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 50/157 (31%), Positives = 70/157 (44%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEKHKSA 306
+H D I ++ S + T S D +K+W L+ A+ K +L + H+
Sbjct: 443 SHYDGIRSLAFHHSQSALL-TASEDGTLKLWN-LQKAVTAKKNAALDVEPIHAFRAHRGP 500
Query: 307 VTALALSTDGTVLYSGACDRSILVWERDQGNYI-VDGDDDSGHMVLKGALRGHTKAI--L 363
V A+ + ++ YSG D I W+ N DG D S VL L GH A+ L
Sbjct: 501 VLAVTMGSNSEYCYSGGADARIHSWKIPDLNMDPYDGYDPS---VLSHVLEGHGDAVWGL 557
Query: 364 CLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCL 400
+ S L S S+D T+RIW SSS G SCL
Sbjct: 558 AFSPTSQRLASCSADGTVRIWDPSSS------GPSCL 588
Score = 107 (42.7 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 44/173 (25%), Positives = 67/173 (38%)
Query: 176 IATLPTLNDRFTKCFLANNYVQVRR--HKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRT 233
+A L ND C L+++ ++ + K T H D + S D T
Sbjct: 409 LADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSALLTASEDGT 468
Query: 234 FKIWRTSDFRCLESVKNAHDDA--INAI---------VVSKSNDGFVYTGSADTKIKVWK 282
K+W + + + KNA D I+A V SN + Y+G AD +I WK
Sbjct: 469 LKLWNLQ--KAVTAKKNAALDVEPIHAFRAHRGPVLAVTMGSNSEYCYSGGADARIHSWK 526
Query: 283 KLRAALQVNKKHS---LVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWE 332
+ + L LE H AV LA S L S + D ++ +W+
Sbjct: 527 IPDLNMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVRIWD 579
Score = 73 (30.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 343 DDDSGHMVLKGALRGHTKAILCLAVVSN--LLFSGSSDNTIRIWRRSSS-----VTDHQK 395
D+ +G V ++ H A+ CLAV N L SGS D ++R+W + +T H+K
Sbjct: 672 DNRTGKSV--HSMVAHLDAVTCLAVDPNGVFLMSGSHDCSLRLWSLDNKTCVQEITAHRK 729
Query: 396 GYS-CLAVLEGHRRPVKCLTAVVDSD 420
+ + + H P K L A +D
Sbjct: 730 KHEEAIHAVACH--PSKALIASAGAD 753
Score = 47 (21.6 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 433 FLVYSGSLDCEIKIWQI 449
FL+ SGS DC +++W +
Sbjct: 700 FLM-SGSHDCSLRLWSL 715
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 151 (58.2 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 59/272 (21%), Positives = 115/272 (42%)
Query: 155 DNNTSAYYSTSGKLKNK---YYERIATLPTLNDRFTKCFLANNYVQVR----RHKKCTWV 207
D+N Y + S +L+ + Y E + + L + +A+N ++ + C +
Sbjct: 313 DHNLLLYDARSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFDLQTSACQIL 372
Query: 208 H-HVDTVXXXXXXXXXXXXXXTSWDRTFKIWR---TSDFRCLESVKNAHDDAINAIVVSK 263
H H D V + D++ ++WR + + C+ + H ++ I S+
Sbjct: 373 HGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEVACVAQ-GSGHTHSVGTICCSR 431
Query: 264 SNDGFVYTGSADTKIKVWKKLRAALQVNKKHS----LVQ---TLEKHKSAVTALALSTDG 316
+ F+ TGS D +K+W A L H +Q T H + ++A++ +
Sbjct: 432 LKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQHCHDKDINSVAVAPND 491
Query: 317 TVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCL--AVVSNLLFS 374
+L +G+ DR+ +W + L G GH + + C+ + + +L +
Sbjct: 492 KLLATGSQDRTAKLWALPRCQ-------------LLGTFSGHRRGLWCVQFSPMDQVLAT 538
Query: 375 GSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
S+D TI++W ++ D +SCL EGH
Sbjct: 539 ASADGTIKLW----ALQD----FSCLKTFEGH 562
Score = 44 (20.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 140 LFSAHQDHKIRVWKIDNNT-----SAYYS 163
LFS+ D IRVW + + +A+YS
Sbjct: 168 LFSSAADTSIRVWSLQERSCLAVLTAHYS 196
Score = 38 (18.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 12/73 (16%), Positives = 31/73 (42%)
Query: 64 QCSATLKVKGNSSYIPSLAI----AGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHA 119
+C T +G+ + +A A LL+ +++ IR W+ + + + +
Sbjct: 140 RCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVLTAHYSAVT 199
Query: 120 NVVATGNGDAVKS 132
++ + +G + S
Sbjct: 200 SLTFSADGHTMLS 212
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 134 (52.2 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 51/210 (24%), Positives = 87/210 (41%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
H D+V S D T K+W F C+ ++ + HD ++++ + + D
Sbjct: 149 HTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
V + S D +K+W +V + V+T H+ V + + DGT+L S + D+++
Sbjct: 208 V-SASRDKTMKMW-------EVATGYC-VKTFTGHREWVRMVRPNQDGTLLASCSNDQTV 258
Query: 329 LVW---------ERDQGNYIVD---GDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGS 376
VW E + ++V+ +S H + A K L SGS
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKS---GKPGPFLLSGS 315
Query: 377 SDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
D TI++W S+ + CL L GH
Sbjct: 316 RDKTIKMWDISTGM--------CLMTLVGH 337
Score = 53 (23.7 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 411 KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+C+ + ++ + D S V +GS+D +K+W+ R
Sbjct: 371 RCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 150 (57.9 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 58/272 (21%), Positives = 115/272 (42%)
Query: 155 DNNTSAYYSTSGKLKNK---YYERIATLPTLNDRFTKCFLANNYVQVR----RHKKCTWV 207
D+N Y + S +L+ + Y E + + L + +A+N ++ + C +
Sbjct: 313 DHNLLLYDAHSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFDLQTSACQIL 372
Query: 208 H-HVDTVXXXXXXXXXXXXXXTSWDRTFKIWR---TSDFRCLESVKNAHDDAINAIVVSK 263
H H D V + D++ ++WR + + C+ + H ++ I S+
Sbjct: 373 HGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEVACVAQ-GSGHTHSVGTICCSR 431
Query: 264 SNDGFVYTGSADTKIKVWKKLRAALQVNKKHS------LVQTLEK-HKSAVTALALSTDG 316
+ F+ TGS D +K+W A L H Q ++ H + ++A++ +
Sbjct: 432 LKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQRCHDKDINSVAVAPND 491
Query: 317 TVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCL--AVVSNLLFS 374
+L +G+ DR+ +W + L G GH + + C+ + + +L +
Sbjct: 492 KLLATGSQDRTAKLWALPRCQ-------------LLGTFSGHRRGLWCVQFSPMDQVLAT 538
Query: 375 GSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
S+D TI++W ++ D +SCL EGH
Sbjct: 539 ASADGTIKLW----ALQD----FSCLKTFEGH 562
Score = 44 (20.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 140 LFSAHQDHKIRVWKIDNNT-----SAYYS 163
LFS+ D IRVW + + +A+YS
Sbjct: 168 LFSSAADTSIRVWSLQERSCLAVLTAHYS 196
Score = 38 (18.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 12/73 (16%), Positives = 31/73 (42%)
Query: 64 QCSATLKVKGNSSYIPSLAI----AGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHA 119
+C T +G+ + +A A LL+ +++ IR W+ + + + +
Sbjct: 140 RCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVLTAHYSAVT 199
Query: 120 NVVATGNGDAVKS 132
++ + +G + S
Sbjct: 200 SLTFSADGHTMLS 212
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 148 (57.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 62/266 (23%), Positives = 107/266 (40%)
Query: 125 GNGDAVKSLVVLGDK--LFSAHQDHKIRVWKIDNNT--SAYYSTSGKLKNKYYERIATLP 180
G+ + VKS+V D L SA D +++W T + +++ + + L
Sbjct: 303 GHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLI 362
Query: 181 TL--NDRFTKCFLANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWR 238
NDR + + + RH T+ H D+V S KIW
Sbjct: 363 ASGSNDRTVRIW--ETTTGLLRH---TFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWD 417
Query: 239 TSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQ 298
T L++V HDD +N++ S + + + S D +K+W +LQ +
Sbjct: 418 TRT-GSLQNVLEGHDDCVNSVSFSPDSR-LLASASDDRTVKIWHAATGSLQ--------R 467
Query: 299 TLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGH 358
TLE H V ++ S D ++ S + D ++ +W D + + +S ++ + H
Sbjct: 468 TLEGHNDWVRSVVFSHDSRLIASASDDMTVKIW--DTATVPLQNNLESHDNWVRSVVFSH 525
Query: 359 TKAILCLAVVSNLLFSGSSDNTIRIW 384
S LL S S D T++IW
Sbjct: 526 D---------SRLLASASDDMTVKIW 542
Score = 141 (54.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 47/176 (26%), Positives = 75/176 (42%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
H D V S D T KIW T+ L++ +HD+ + ++V S +
Sbjct: 472 HNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVP-LQNNLESHDNWVRSVVFSHDSR-L 529
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
+ + S D +K+W +L+ TLE H V +++ S D +L S + D ++
Sbjct: 530 LASASDDMTVKIWDTATGSLE--------NTLEGHDDRVNSVSFSPDSRLLASASDDGTV 581
Query: 329 LVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
+W G + D SG + + A HT SNLL S D T++IW
Sbjct: 582 KIWYAATGT-VQHTFDGSGRVAISLAF-SHT---------SNLLASAMDDGTVKIW 626
Score = 125 (49.1 bits), Expect = 0.00051, P = 0.00051
Identities = 46/217 (21%), Positives = 86/217 (39%)
Query: 188 KCFLANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLES 247
KC Y + H V S D T KIW T+ L++
Sbjct: 241 KCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTAT-SFLQN 299
Query: 248 VKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAV 307
H++ + ++V S + + + S D +K+W LQ + L+ H +V
Sbjct: 300 TLEGHNEWVKSVVFSHDSR-LLASASDDGTVKIWDTATGTLQ--------RMLKGHNDSV 350
Query: 308 TALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAV 367
++ S D ++ SG+ DR++ +WE G +L+ H +++ ++
Sbjct: 351 RSVVFSHDSRLIASGSNDRTVRIWETTTG-------------LLRHTFEDHEDSVMAVSF 397
Query: 368 V--SNLLFSGSSDNTIRIW-RRSSSVTDHQKGYS-CL 400
S L S S ++IW R+ S+ + +G+ C+
Sbjct: 398 AHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCV 434
Score = 61 (26.5 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 20/87 (22%), Positives = 44/87 (50%)
Query: 71 VKGNSSYIPSLAIA--GKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGD 128
++G++ ++ S+ + +LL S +G ++ W+ T+T G ++ G+ D
Sbjct: 301 LEGHNEWVKSVVFSHDSRLLASASDDGTVKIWD---------TAT--GTLQRMLK-GHND 348
Query: 129 AVKSLVVLGDK--LFSAHQDHKIRVWK 153
+V+S+V D + S D +R+W+
Sbjct: 349 SVRSVVFSHDSRLIASGSNDRTVRIWE 375
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 132 (51.5 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 50/210 (23%), Positives = 88/210 (41%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
H D+V S D T K+W F C+ ++ + HD ++++ + + D
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
V + + D IK+W+ +Q V+T H+ V + + DGT++ S + D+++
Sbjct: 208 V-SAARDKTIKMWE-----VQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 329 LVW---------ERDQGNYIVD---GDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGS 376
VW E + ++V+ +S + + A TK L SGS
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKS---GKPGPFLLSGS 315
Query: 377 SDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
D TI++W S+ + CL L GH
Sbjct: 316 RDKTIKMWDVSTGM--------CLMTLVGH 337
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 56/228 (24%), Positives = 96/228 (42%)
Query: 229 SWDRTFKIW--RTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
S D T K+W T DF E H D++ I S + + SAD IK+W
Sbjct: 127 SEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDF--- 179
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
+ ++T+ H V+++A+ +G + S A D++I +WE G Y V +
Sbjct: 180 -----QGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTG-YCVK--TFT 231
Query: 347 GHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW-----RRSSSVTDHQKGYSCLA 401
GH +R + L+ S S+D T+R+W + + +H+ C++
Sbjct: 232 GHREWVRMVRPNQDG--------TLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 402 VLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
P +++ ++ S FL+ SGS D IK+W +
Sbjct: 284 WA-----PESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDV 325
Score = 54 (24.1 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 411 KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+C+ + ++ + D T+ V +GS+D +K+W+ R
Sbjct: 371 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 146 (56.5 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 43/133 (32%), Positives = 62/133 (46%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
K ++ TL H V +S G + SG+ DR++ VW VDG L
Sbjct: 285 KGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWST------VDGS-------LL 331
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKC 412
L+GHT + C+A+ ++L +GS D T+R+W D + G LA L GH V+C
Sbjct: 332 HTLQGHTSTVRCMAMAGSILVTGSRDTTLRVW-------DVESGRH-LATLHGHHAAVRC 383
Query: 413 L----TAVVDSDY 421
+ T VV Y
Sbjct: 384 VQFDGTTVVSGGY 396
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 48/202 (23%), Positives = 80/202 (39%)
Query: 142 SAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYVQV--- 198
+A + +R KI+ N +A + + + + T ++D +N ++V
Sbjct: 224 AADKSRYLRADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVWCI 283
Query: 199 -RRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAIN 257
+ T V H V S DRT K+W T D L +++ H +
Sbjct: 284 DKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQG-HTSTVR 342
Query: 258 AIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGT 317
+ ++ S + TGS DT ++VW V L TL H +AV + DGT
Sbjct: 343 CMAMAGS---ILVTGSRDTTLRVW-------DVESGRHLA-TLHGHHAAVRCVQF--DGT 389
Query: 318 VLYSGACDRSILVWERDQGNYI 339
+ SG D ++ +W G I
Sbjct: 390 TVVSGGYDFTVKIWNAHTGRCI 411
Score = 43 (20.2 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 135 VLGDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLK 169
++G + H+DH I +I ++ S LK
Sbjct: 245 IMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLK 279
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 146 (56.5 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 43/133 (32%), Positives = 62/133 (46%)
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
K ++ TL H V +S G + SG+ DR++ VW VDG L
Sbjct: 285 KGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWST------VDGS-------LL 331
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKC 412
L+GHT + C+A+ ++L +GS D T+R+W D + G LA L GH V+C
Sbjct: 332 HTLQGHTSTVRCMAMAGSILVTGSRDTTLRVW-------DVESGRH-LATLHGHHAAVRC 383
Query: 413 L----TAVVDSDY 421
+ T VV Y
Sbjct: 384 VQFDGTTVVSGGY 396
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 48/202 (23%), Positives = 80/202 (39%)
Query: 142 SAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYVQV--- 198
+A + +R KI+ N +A + + + + T ++D +N ++V
Sbjct: 224 AADKSRYLRADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVWCI 283
Query: 199 -RRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAIN 257
+ T V H V S DRT K+W T D L +++ H +
Sbjct: 284 DKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQG-HTSTVR 342
Query: 258 AIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGT 317
+ ++ S + TGS DT ++VW V L TL H +AV + DGT
Sbjct: 343 CMAMAGS---ILVTGSRDTTLRVW-------DVESGRHLA-TLHGHHAAVRCVQF--DGT 389
Query: 318 VLYSGACDRSILVWERDQGNYI 339
+ SG D ++ +W G I
Sbjct: 390 TVVSGGYDFTVKIWNAHTGRCI 411
Score = 43 (20.2 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 135 VLGDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLK 169
++G + H+DH I +I ++ S LK
Sbjct: 245 IMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLK 279
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 42/163 (25%), Positives = 76/163 (46%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S+D+T K+W +C + + H I + + + V TGS DT K+W +
Sbjct: 154 SFDKTCKLWSAETGKCYHTFRG-HTAEIVCLSFNPQST-VVATGSMDTTAKLWD-----I 206
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
Q ++ V TL H + + +L+ T G + +G+ D +++VW+ G + H
Sbjct: 207 QSGEE---VVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKV--------H 255
Query: 349 MVLKGALRGHTKAILCLAVVS---NLLFSGSSDNTIRIWRRSS 388
++ GH A + A+ S +L+ +GS D T +W +S
Sbjct: 256 TLI-----GHC-AEISSALFSWDCSLILTGSMDKTCMLWDATS 292
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 39/159 (24%), Positives = 69/159 (43%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S D+T +W + +C+ ++ HDD I + + T SAD +V+
Sbjct: 280 SMDKTCMLWDATSGKCVATL-TGHDDEILDSCFDYTGK-LIATASADGTARVYNA----- 332
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
+K + LE H+ ++ ++ + G L +G+ D++ +W+ G +
Sbjct: 333 -TTRK--CITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQ-------- 381
Query: 349 MVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWR 385
L GHT I A N++ +GS DN+ RIWR
Sbjct: 382 -----VLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIWR 415
Score = 110 (43.8 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 28/112 (25%), Positives = 53/112 (47%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S+DRT K+W T+ L +++ H + + AI + + TGS D K+W +
Sbjct: 111 SYDRTCKVWDTASGEELHTLEG-HRNVVYAIAFNNPYGDKIATGSFDKTCKLW-----SA 164
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIV 340
+ K + T H + + L+ + TV+ +G+ D + +W+ G +V
Sbjct: 165 ETGKCY---HTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVV 213
Score = 77 (32.2 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 24/54 (44%), Positives = 27/54 (50%)
Query: 355 LRGHTKAILCLAV--VSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
L GH I ++ N L +GSSD T RIW D Q G CL VLEGH
Sbjct: 341 LEGHEGEISKISFNPQGNRLLTGSSDKTARIW-------DVQTG-QCLQVLEGH 386
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 141 (54.7 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 63/286 (22%), Positives = 110/286 (38%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYV 196
G+ S +D IR+W + NT + + + P + F A +
Sbjct: 26 GNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSPCGEYLASASFDATTAI 85
Query: 197 QVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTS---DFRCLESVKNAHD 253
+ T H + V S D++ IW + +F C +V NAH
Sbjct: 86 WSKHECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECA-AVLNAHS 144
Query: 254 DAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALS 313
+ +V + + + + S D IK++ + +AL + TL H S V ++
Sbjct: 145 QDVKRVVWHPTKE-ILASASYDNTIKMYAE--SAL--DSDWDCTATLSSHTSTVWSIDFD 199
Query: 314 TDGTVLYSGACDRSILVWER-DQGNYI-VDGDDDSGHMVLKGALRG-HTKAILCLA--VV 368
DG L S + D ++ +W GN + D + L G HT+AI ++ +
Sbjct: 200 ADGERLVSCSDDATLKIWRAYHPGNEAGIATPDKTTVWKCVCTLSGLHTRAIYDVSWCKL 259
Query: 369 SNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEG-HRRPVKCL 413
+ L+ S D+ IRI++ SS + L E H + V +
Sbjct: 260 TGLIASACGDDAIRIFKESSDSKRDAPSFELLTSEESAHEQDVNAV 305
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 131 (51.2 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 47/164 (28%), Positives = 72/164 (43%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDD-AINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQ 289
D T K+W D R +++ D I A+ S + D ++TG D +KVW LR
Sbjct: 160 DGTAKLW---DMRQRGAIQTFPDKYQITAVSFSDAADK-IFTGGVDNDVKVWD-LR---- 210
Query: 290 VNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHM 349
K TLE H+ +T ++LS DG+ L + D + VW D Y +
Sbjct: 211 ---KGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVW--DMRPY---APQNRCVK 262
Query: 350 VLKGALRGHTKAIL-CL-AVVSNLLFSGSSDNTIRIWRRSSSVT 391
+ +G K +L C + + +GSSD + IW +S T
Sbjct: 263 IFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRT 306
Score = 51 (23.0 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 22/75 (29%), Positives = 34/75 (45%)
Query: 84 AGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHAN-VVATGNGDAVKSL--VVLGDKL 140
AG L+ GS + EI W V+ GD N +V G+ +A+ L G ++
Sbjct: 64 AGTLIASGSHDREIFLWR------VH------GDCKNFMVLKGHKNAILDLHWTSDGSQI 111
Query: 141 FSAHQDHKIRVWKID 155
SA D +R W ++
Sbjct: 112 VSASPDKTVRAWDVE 126
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 141 (54.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 65/293 (22%), Positives = 118/293 (40%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYV 196
G L S D KIR+W + ++ S + + ++A P N + F A +
Sbjct: 28 GTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCI 87
Query: 197 QVRRHK--KC--TWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSD---FRCLESVK 249
+ +C T H + V S D++ +W + + C+ SV
Sbjct: 88 WKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECV-SVL 146
Query: 250 NAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTA 309
++H + +V S + + + S D +K+++ + TLE H+S V +
Sbjct: 147 SSHTQDVKHVVWHPSQE-LLASASYDDTVKLYQ------EEGDDWVCCATLEGHESTVWS 199
Query: 310 LALSTDGTVLYSGACDRSILVWER-----DQGNYIVDGDDDSGHMVLKGALRG-HTKAIL 363
+A G L S + DR++ +W + +QG G D S + L G HT+ I
Sbjct: 200 IAFDPSGQRLASCSDDRTVRIWRQYLPGNEQG-VACSGSDPSWKCIC--TLSGFHTRTIY 256
Query: 364 CLA--VVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL-EGHRRPVKCL 413
+A ++ L + D+ IR++ Q +S A L + H + V C+
Sbjct: 257 DVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCV 309
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 148 (57.2 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 65/244 (26%), Positives = 106/244 (43%)
Query: 105 NNYVNITSTDVGDHANVVATGNGDAVKSLV---------VLGDK-LFSAHQDHKIRVWKI 154
+NY+ +S D +++ +GN +++LV V +K LFS D I+VW
Sbjct: 922 SNYIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVANEKYLFSCSYDKTIKVW-- 979
Query: 155 DNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYVQVRRHKKCTWVH----HV 210
D +T + + KY + +A L+ R+ + + V + + + H
Sbjct: 980 DLSTFKEIKSFEGVHTKYIKTLA----LSGRYLFSGGNDQIIYVWDTETLSMLFNMQGHE 1035
Query: 211 DTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVY 270
D V TS D KIW S+F C++++K H +++++ VV D ++Y
Sbjct: 1036 DWVLSLHCTASYLFS--TSKDNVIKIWDLSNFSCIDTLKG-HWNSVSSCVVK---DRYLY 1089
Query: 271 TGSADTKIKVWK--KLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
+GS D IKVW L + K HSL V L + + + S A D SI
Sbjct: 1090 SGSEDNSIKVWDLDTLECVYTIPKSHSL---------GVKCLMVFNNQII--SAAFDGSI 1138
Query: 329 LVWE 332
VWE
Sbjct: 1139 KVWE 1142
Score = 128 (50.1 bits), Expect = 0.00014, P = 0.00014
Identities = 67/287 (23%), Positives = 118/287 (41%)
Query: 128 DAVKSLVVLGD-KLFSA-HQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDR 185
+ V S+ + KL A + D RV+ +++N Y+ +G K+ E IA N
Sbjct: 870 ERVNSIAFFDNQKLLCAGYGDGTYRVFDVNDNWKCLYTVNGHRKS--IESIAC--NSNYI 925
Query: 186 FTKCFLANNYVQVR--R--HKKC--TWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRT 239
FT +N ++V R + KC T V H V S+D+T K+W
Sbjct: 926 FTSS--PDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVANEKYLFS--CSYDKTIKVWDL 981
Query: 240 SDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQT 299
S F+ ++S + H I + +S ++++G D I VW ++ N +
Sbjct: 982 STFKEIKSFEGVHTKYIKTLALSGR---YLFSGGNDQIIYVWDTETLSMLFNMQGHEDWV 1038
Query: 300 LEKHKSAVTALALSTDGTV----LYSGACDRSILV-WERDQG-----NYIVDGDDDSGHM 349
L H +A + S D + L + +C ++ W Y+ G +D+
Sbjct: 1039 LSLHCTASYLFSTSKDNVIKIWDLSNFSCIDTLKGHWNSVSSCVVKDRYLYSGSEDNSIK 1098
Query: 350 V-----LKGAL---RGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSS 388
V L+ + H+ + CL V +N + S + D +I++W S
Sbjct: 1099 VWDLDTLECVYTIPKSHSLGVKCLMVFNNQIISAAFDGSIKVWEWQS 1145
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 128 (50.1 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 35/109 (32%), Positives = 57/109 (52%)
Query: 299 TLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGH 358
TL+ H AV L +TDG++L+S + D+++ VW D ++G V + L+GH
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW-----------DSETGERVKR--LKGH 151
Query: 359 TKAI-LCLAVVSN--LLFSGSSDNTIRIW--RRSSSVTDHQKGYSCLAV 402
T + C L+ +GS D T+++W R+ ++V Q Y LAV
Sbjct: 152 TSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAV 200
Score = 127 (49.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 60/260 (23%), Positives = 109/260 (41%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYST---SGKLKNKYYERIATL--PTLNDRFTKCFL 191
G L SA D I +W + + Y + SG + +Y ++ D+ +
Sbjct: 79 GSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD 138
Query: 192 ANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXT-SWDRTFKIWRTSDFRCLESVKN 250
+ +V+R K H V T S D T K+W +++ +N
Sbjct: 139 SETGERVKRLKG-----HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQN 193
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTAL 310
+ + A+ + ++D + +G D IKVW L+ NK L T+ H +VT L
Sbjct: 194 TYQ--VLAVTFNDTSDQII-SGGIDNDIKVWD-----LRQNK---LTYTMRGHADSVTGL 242
Query: 311 ALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAIL-CL-AVV 368
+LS++G+ L S A D ++ VW D + + + +G + K +L C +
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVW--DVRPF---APKERCVKIFQGNVHNFEKNLLRCSWSPD 297
Query: 369 SNLLFSGSSDNTIRIWRRSS 388
+ + +GS+D + +W +S
Sbjct: 298 GSKIAAGSADRFVYVWDTTS 317
Score = 54 (24.1 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
+ TS + SG +D +IK+W +R
Sbjct: 203 NDTSDQIISGGIDNDIKVWDLR 224
Score = 41 (19.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
S S+L+ S ++D +++W +R
Sbjct: 246 SEGSYLL-SNAMDNTVRVWDVR 266
>POMBASE|SPAC664.15 [details] [associations]
symbol:caf4 "CCR4-Not complex subunit Caf4/Mdv1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000002
"mitochondrial genome maintenance" evidence=ISO] [GO:0000266
"mitochondrial fission" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=ISO] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0030014 "CCR4-NOT complex"
evidence=ISO] [GO:0030015 "CCR4-NOT core complex" evidence=NAS]
[GO:0051020 "GTPase binding" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC664.15 EMBL:CU329670
GO:GO:0006355 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000002
GO:GO:0030015 OrthoDB:EOG469V30 GO:GO:0000266 GO:GO:0006354
GO:GO:0051020 OMA:CVQTLDV PIR:T50245 PIR:T50289
RefSeq:XP_001713057.1 ProteinModelPortal:Q9P7I3 STRING:Q9P7I3
EnsemblFungi:SPAC664.15.1 GeneID:3361526 KEGG:spo:SPAC664.15
NextBio:20811568 Uniprot:Q9P7I3
Length = 651
Score = 138 (53.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 48/190 (25%), Positives = 84/190 (44%)
Query: 163 STSGKLKNKYYERIATLPTLNDRFTKCFLANNYVQVRRHKKCTWVHHVDTVXXXXXXXXX 222
ST+ ++ + Y+E+ + + T+ + NY+ K+ + H + +
Sbjct: 288 STASEVVSDYFEQNSAFSKAPEN-TESSVNQNYIVGNLVKQ--FQAHSEYITSLDFSHPF 344
Query: 223 XXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK 282
S D+T K+W + L S+K H D ++ + + D F+ TGS DT +++W
Sbjct: 345 GTLATASTDKTVKVWDMAGVVYLGSLKG-HSDYVSCLAIQ---DSFIATGSMDTTVRLWN 400
Query: 283 KLRAALQVNK--KHSL-----------VQTLEKHKSAVTALALSTDGTVLYSGACDRSIL 329
L + + SL L H + VTALALS+D VL +GA D+++
Sbjct: 401 LDNDVLHKDNPVEESLNSPPDQPVDNATNVLTSHTAPVTALALSSDD-VLITGADDKTVR 459
Query: 330 VWERDQGNYI 339
W+ G I
Sbjct: 460 QWDIVTGRCI 469
Score = 122 (48.0 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 37/155 (23%), Positives = 73/155 (47%)
Query: 295 SLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGA 354
+LV+ + H +T+L S L + + D+++ VW D +V G+
Sbjct: 323 NLVKQFQAHSEYITSLDFSHPFGTLATASTDKTVKVW-------------DMAGVVYLGS 369
Query: 355 LRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLT 414
L+GH+ + CLA+ + + +GS D T+R+W + V H+ ++ +PV T
Sbjct: 370 LKGHSDYVSCLAIQDSFIATGSMDTTVRLWNLDNDVL-HKDNPVEESLNSPPDQPVDNAT 428
Query: 415 AVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
V+ S + + S+ ++ +G+ D ++ W I
Sbjct: 429 NVLTSHTAPVTALALSSDDVLITGADDKTVRQWDI 463
Score = 51 (23.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 435 VYSGSLDCEIKIWQIR 450
+YSGS D ++IW +R
Sbjct: 549 LYSGSYDNSVRIWDLR 564
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 62/305 (20%), Positives = 124/305 (40%)
Query: 95 GEIRAWNRDPNNYV-NITSTDVGDHANVVATGNGDAVKSLVVLGDKLFSAHQDHKIRVWK 153
G +R W + + + S+D+ ++ + G +++ L D + +
Sbjct: 279 GVVRIWKSEGSICLYEQKSSDITVSSDDEESKRGFTAAAMLPSDHGLLCVTADQQFFFYS 338
Query: 154 IDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYVQVRRHK----KCTWV-- 207
+ N K Y E IA + L D +A N +VR + C++V
Sbjct: 339 VVENVEETELVLSKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLA 398
Query: 208 HHVDTVXXXXXXXXXXXXXXT---SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKS 264
H + V S D+T ++W + C+ V H+ I A+ +K
Sbjct: 399 GHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCI-GVGTGHNGDILAVAFAKK 457
Query: 265 NDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQT---LEKHKSAVTALALSTDGTVLYS 321
+ F +GS D +KVW L + +++ ++T + H + ++A++ + +++ +
Sbjct: 458 SFSFFVSGSGDRTLKVWS-LDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCT 516
Query: 322 GACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCL--AVVSNLLFSGSSDN 379
G+ DR+ +W D H+V L+GH + I + + V + + S D
Sbjct: 517 GSEDRTASIWRLP----------DLVHVV---TLKGHKRRIFSVEFSTVDQCVMTASGDK 563
Query: 380 TIRIW 384
T++IW
Sbjct: 564 TVKIW 568
Score = 137 (53.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 37/133 (27%), Positives = 58/133 (43%)
Query: 203 KC--TWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIV 260
KC +W H V DR +W C + H +++I+
Sbjct: 93 KCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRG-HKGVVSSIL 151
Query: 261 VSK-SNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVL 319
SN + +GS D ++VW L A N + + +EKH SAVT++ALS DG L
Sbjct: 152 FHPDSNKNILISGSDDATVRVWD-LNAK---NTEKKCLAIMEKHFSAVTSIALSEDGLTL 207
Query: 320 YSGACDRSILVWE 332
+S D+ + +W+
Sbjct: 208 FSAGRDKVVNLWD 220
Score = 129 (50.5 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 40/162 (24%), Positives = 76/162 (46%)
Query: 245 LESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHK 304
++S D + A+ +S +D +++ +I+VW L+ K +++ + H+
Sbjct: 52 VKSTIEGESDTLTALALSP-DDKLLFSAGHSRQIRVWD-----LETLK---CIRSWKGHE 102
Query: 305 SAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILC 364
V +A G +L + DR +LVW+ D G + GH + ++ H +
Sbjct: 103 GPVMGMACHASGGLLATAGADRKVLVWDVD-GGFCTHYF--RGHKGVVSSILFHPDSN-- 157
Query: 365 LAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
N+L SGS D T+R+W ++ T+ + CLA++E H
Sbjct: 158 ----KNILISGSDDATVRVWDLNAKNTEKK----CLAIMEKH 191
Score = 122 (48.0 bits), Expect = 0.00045, P = 0.00045
Identities = 50/211 (23%), Positives = 92/211 (43%)
Query: 235 KIWRTSDFRCLESVKNAHDDAINAI--VVSKSNDGFVYTGSADTKIKVWKKLRAALQVNK 292
+++ + C V H + + ++ VS S + + TGS D +++W +K
Sbjct: 384 RVYDVATMSC-SYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNA------TSK 436
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLY-SGACDRSILVWERDQGNYIVDGDDDSGHMVL 351
S + H + A+A + + SG+ DR++ VW D G I + ++ ++
Sbjct: 437 --SCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLD-G--ISEDSEEPINLKT 491
Query: 352 KGALRGHTKAILCLAVVSN--LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRP 409
+ + H K I +AV N L+ +GS D T IWR V H + L+GH+R
Sbjct: 492 RSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLV--H------VVTLKGHKRR 543
Query: 410 VKCLT-AVVDSDYSNRNSDHSSTSFLVYSGS 439
+ + + VD + D + + + GS
Sbjct: 544 IFSVEFSTVDQCVMTASGDKTVKIWAISDGS 574
Score = 117 (46.2 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 52/198 (26%), Positives = 83/198 (41%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S DRT IWR D + ++K H I ++ S + D V T S D +K+W A+
Sbjct: 518 SEDRTASIWRLPDLVHVVTLKG-HKRRIFSVEFS-TVDQCVMTASGDKTVKIW-----AI 570
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
S ++T E H S+V + TDGT S D + +W + I D
Sbjct: 571 SDG---SCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQ---- 623
Query: 349 MVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCL--AVLE 404
H + LAV + ++ +G D I +W S+ +D + + A+L
Sbjct: 624 ---------HEDKVWALAVGKKTEMIATGGGDAVINLWH-DSTASDKEDDFRKEEEAILR 673
Query: 405 GHRRPVKCLTAVVDSDYS 422
G AV+D++Y+
Sbjct: 674 GQELE----NAVLDAEYT 687
Score = 50 (22.7 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 15/69 (21%), Positives = 29/69 (42%)
Query: 87 LLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVLGDKLFSAHQD 146
L+ GS + +R WN + + + + G + +++A S V G D
Sbjct: 418 LIVTGSKDKTVRLWNATSKSCIGVGT---GHNGDILAVAFAKKSFSFFVSGSG------D 468
Query: 147 HKIRVWKID 155
++VW +D
Sbjct: 469 RTLKVWSLD 477
Score = 43 (20.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 28/106 (26%), Positives = 43/106 (40%)
Query: 345 DSGHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTD-HQKGYSCLAVL 403
D M L GH + +L L + S S + I + +V + SC+ V
Sbjct: 387 DVATMSCSYVLAGHKEVVLSL----DTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVG 442
Query: 404 EGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
GH + AV ++ + S SF V SGS D +K+W +
Sbjct: 443 TGHNGDI---LAVA---FAKK-----SFSFFV-SGSGDRTLKVWSL 476
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 133 (51.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 54/233 (23%), Positives = 101/233 (43%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S D T K+W F C+ ++ + HD ++++ + + D V + S D IK+W+ +
Sbjct: 1 SADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWE-----V 53
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
Q V+T H+ V + + DGT++ S + D+++ VW +V +
Sbjct: 54 QTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-------VVATKE---- 99
Query: 349 MVLKGALRGHTKAILCLAVVSNLLFSGSSDNT-IRI----WRRSSSVTDHQKGYSCLAVL 403
K LR H + C++ +S S+ T + W R V H G L+
Sbjct: 100 --CKAELREHEHVVECISWAPESSYSSISEATGSEVGHDNWVRG--VLFHSGGKFILSCA 155
Query: 404 EGHRRPV------KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+ V +C+ + ++ + D T+ V +GS+D +K+W+ R
Sbjct: 156 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 208
>DICTYBASE|DDB_G0282489 [details] [associations]
symbol:mhkD "putative myosin heavy chain kinase D"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;ISS] [GO:0006468 "protein
phosphorylation" evidence=IEA;ISS] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA;ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR004166 InterPro:IPR011009
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320 SMART:SM00811
dictyBase:DDB_G0282489 GO:GO:0005524 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000047 GenomeReviews:CM000152_GR SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:Q923J1
GO:GO:0031037 ProtClustDB:CLSZ2429540 GO:GO:0016905
RefSeq:XP_640080.1 ProteinModelPortal:Q54SF9
EnsemblProtists:DDB0220109 GeneID:8623609 KEGG:ddi:DDB_G0282489
OMA:FRAHRRS Uniprot:Q54SF9
Length = 941
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 68/338 (20%), Positives = 142/338 (42%)
Query: 64 QCSATLKVKGNSSYIPSLAI-AGKL-LYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANV 121
+ ++ + + G+ + SL I K LY S++G ++ WN N +++ + D
Sbjct: 626 ELTSIVHLSGHDERVCSLLINQDKTKLYSASADGYVKIWNLTNNE--DLSKIQMIDSFRA 683
Query: 122 VATGNGDAVKSLVVLGDKLFSAHQDHKIRVWKIDNNTSAYYST--SGKLKNKYYERIATL 179
+ +++ +++ LF+A D I++W + T+ ++ S + YE I L
Sbjct: 684 ----HRRSIEKMLLNEKYLFTASSDGTIKIWSLPTTTTTTTTSKQSSSSSSSSYECIGKL 739
Query: 180 PTLNDRFTK-CF-LANNYV-------QVRRHK----KCTWVHHVDTVXXXXXXXXXXXXX 226
C + NN++ Q++ + KC +
Sbjct: 740 EDHTAEVNDMCIDIENNFLVSCSFDKQIKIYDLSTFKCIKSLNAHGKSIKSIYMSGKYLF 799
Query: 227 XTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
+S D++ KIW C+ + +AHD I ++ + + +++ S D +IK W +
Sbjct: 800 SSSNDQSIKIWDLEMCMCVYGMNDAHDAPITSLRMFGNR---LFSASKDGEIKDWNL--S 854
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
Q TL++H A+T + ++++G L+ + D +I I+D + +
Sbjct: 855 TFQPTT------TLDQHNMAITDILVTSNG-YLFVSSDDSTIR---------IIDISNQN 898
Query: 347 GHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
+ + + + H + LA +FSG DN I++W
Sbjct: 899 EPIKIISSTKAHRSGVNSLATDGKRIFSGGCDNLIKVW 936
>UNIPROTKB|Q32SG6 [details] [associations]
symbol:Q32SG6 "Protein HIRA" species:4577 "Zea mays"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011494 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07569 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006351
GO:GO:0016568 KO:K11293 EMBL:AY940678 RefSeq:NP_001105835.1
UniGene:Zm.22931 ProteinModelPortal:Q32SG6 IntAct:Q32SG6
GeneID:732736 KEGG:zma:732736 Gramene:Q32SG6 Uniprot:Q32SG6
Length = 964
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 48/154 (31%), Positives = 75/154 (48%)
Query: 271 TGSADTKIKVWKKLRAALQVN----KKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDR 326
TG D K+++W + + + N K L+ TL H +V + + G L SG+ D+
Sbjct: 30 TGGGDQKVRIWS-MESVHKDNTNNDSKQRLLATLRDHFGSVNCVRWAKHGRYLASGSDDQ 88
Query: 327 SILVWERDQGNYIVD---GDD-DSGHMVLKGALRGHTKAILCLAVV--SNLLFSGSSDNT 380
IL+ ER G+ + G+ D+ + + RGHT ++ L+ + L SGS DNT
Sbjct: 89 VILIHERKAGSGTSEFGSGEPPDAENWKVIMTWRGHTADVVDLSWSPDDSTLASGSLDNT 148
Query: 381 IRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLT 414
I IW ++ + C AVL GH VK +T
Sbjct: 149 IHIWNMNNGI--------CTAVLRGHTSLVKGVT 174
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 74/294 (25%), Positives = 118/294 (40%)
Query: 105 NNYVNITSTDVGDHANVVATGNGDAVKSLVVL-GDKLFSAHQDHKIRVWKIDNNTSAYYS 163
N N+T + D + +VA G D+ L L G L S + + K NT
Sbjct: 459 NTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDR---HKPQENTRKLIG 515
Query: 164 TSGKLKNKYY--ERIATLPTLNDRFTKCFLANNYVQVRRHKKCTWVHHVDTVXXXXXXXX 221
SG + + + L D+ + + + Y + +K H V
Sbjct: 516 HSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKG-----HTQPVWDVKFSPL 570
Query: 222 XXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVW 281
S D+T ++W T L + H + ++ + N +V+TGS+D ++W
Sbjct: 571 GHYFVTASHDQTARLWATDHIYPLR-IFAGHINDVDCVEFHP-NSNYVFTGSSDKTCRMW 628
Query: 282 KKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
V+ + V+ H ++V LA+S DG L SG D I VW D G
Sbjct: 629 -------DVHTGNC-VRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVW--DIG----- 673
Query: 342 GDDDSGHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDNTIRIWRRSSSVTD 392
SG LK ++RGH +A L S +L SG +DN++R+W + D
Sbjct: 674 ----SGRR-LK-SMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDVKKNTND 721
Score = 129 (50.5 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 60/256 (23%), Positives = 105/256 (41%)
Query: 87 LLYGGSSNGEIRAWNRDPNNYVNITSTDVGD-HANV-VATGNGDAVKSLVVLGDK--LFS 142
L+ G + I+ W+ D ++ D N G+ V + D L S
Sbjct: 475 LVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSPDNKYLLS 534
Query: 143 AHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLP----TLNDRFTKCFLANNYVQV 198
+D +R+W +D T A S G + + + + L T + T A +++
Sbjct: 535 CSEDKTVRLWSLDTYT-ALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYP 593
Query: 199 RRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINA 258
R + H++ V S D+T ++W C+ V H +++N
Sbjct: 594 LR----IFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVR-VFLGHTNSVNC 648
Query: 259 IVVSKSNDG-FVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKH-KSAVTALALSTDG 316
+ VS DG ++ +G D I VW + L +++ H ++++ +LA S DG
Sbjct: 649 LAVSP--DGRWLASGGEDGIICVW-------DIGSGRRL-KSMRGHARASLYSLAFSRDG 698
Query: 317 TVLYSGACDRSILVWE 332
TVL SG D S+ VW+
Sbjct: 699 TVLVSGCADNSVRVWD 714
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 60/260 (23%), Positives = 109/260 (41%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYST---SGKLKNKYYERIATL--PTLNDRFTKCFL 191
G L SA D I +W + + Y + SG + +Y ++ D+ +
Sbjct: 78 GSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD 137
Query: 192 ANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXT-SWDRTFKIWRTSDFRCLESVKN 250
+ +V+R K H V T S D T K+W +++ +N
Sbjct: 138 SETGERVKRLKG-----HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN 192
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTAL 310
+ + A+ + ++D + +G D IKVW L+ NK L T+ H +VT L
Sbjct: 193 TYQ--VLAVTFNDTSDQII-SGGIDNDIKVWD-----LRQNK---LTYTMRGHADSVTGL 241
Query: 311 ALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAIL-CL-AVV 368
+LS++G+ L S A D ++ VW D + + + +G + K +L C +
Sbjct: 242 SLSSEGSYLLSNAMDNTVRVW--DVRPF---APKERCVKIFQGNVHNFEKNLLRCSWSPD 296
Query: 369 SNLLFSGSSDNTIRIWRRSS 388
+ + +GS+D + +W +S
Sbjct: 297 GSKIAAGSADRFVYVWDTTS 316
Score = 127 (49.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 299 TLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGH 358
TL+ H AV L +TDG++L+S + D+++ VW D ++G V + L+GH
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW-----------DSETGERVKR--LKGH 150
Query: 359 TKAI-LCLAVVSN--LLFSGSSDNTIRIW--RRSSSVTDHQKGYSCLAV 402
T + C L+ +GS D T+++W R+ +++ Q Y LAV
Sbjct: 151 TSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAV 199
Score = 54 (24.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
+ TS + SG +D +IK+W +R
Sbjct: 202 NDTSDQIISGGIDNDIKVWDLR 223
Score = 41 (19.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
S S+L+ S ++D +++W +R
Sbjct: 245 SEGSYLL-SNAMDNTVRVWDVR 265
>UNIPROTKB|E1C837 [details] [associations]
symbol:STRN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000159 "protein phosphatase type 2A complex"
evidence=IEA] [GO:0005923 "tight junction" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0051721
"protein phosphatase 2A binding" evidence=IEA] [GO:0070016
"armadillo repeat domain binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008285 GO:GO:0000159
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005923
InterPro:IPR013258 Pfam:PF08232 GeneTree:ENSGT00520000055597
OMA:FNMETRQ EMBL:AADN02011831 IPI:IPI00580740
Ensembl:ENSGALT00000017218 Uniprot:E1C837
Length = 800
Score = 143 (55.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 42/141 (29%), Positives = 61/141 (43%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEKHKSA 306
+H D I + + T S D +K+W L+ K SL + T H
Sbjct: 481 SHFDGIRGLAFHPVEPVLI-TASEDHTLKMWN-LQKTAPAKKSASLDVEPIYTFRAHSGP 538
Query: 307 VTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAI--LC 364
V + +S++G YSG D I W N +D D VL+GA GHT A+ L
Sbjct: 539 VLCVVMSSNGEQCYSGGTDGLIHGWNTTNPN--IDPYDSYDPSVLRGAFVGHTDAVWGLV 596
Query: 365 LAVVSNLLFSGSSDNTIRIWR 385
+ L S S+D T+R+W+
Sbjct: 597 YSGTHQRLLSCSADGTVRLWK 617
Score = 47 (21.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 437 SGSLDCEIKIWQI 449
SGS DC I++W +
Sbjct: 743 SGSHDCSIRLWNL 755
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 60/260 (23%), Positives = 109/260 (41%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYST---SGKLKNKYYERIATL--PTLNDRFTKCFL 191
G L SA D I +W + + Y + SG + +Y ++ D+ +
Sbjct: 79 GSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD 138
Query: 192 ANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXT-SWDRTFKIWRTSDFRCLESVKN 250
+ +V+R K H V T S D T K+W +++ +N
Sbjct: 139 SETGERVKRLKG-----HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN 193
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTAL 310
+ + A+ + ++D + +G D IKVW L+ NK L T+ H +VT L
Sbjct: 194 TYQ--VLAVTFNDTSDQII-SGGIDNDIKVWD-----LRQNK---LTYTMRGHADSVTGL 242
Query: 311 ALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAIL-CL-AVV 368
+LS++G+ L S A D ++ VW D + + + +G + K +L C +
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVW--DVRPF---APKERCVKIFQGNVHNFEKNLLRCSWSPD 297
Query: 369 SNLLFSGSSDNTIRIWRRSS 388
+ + +GS+D + +W +S
Sbjct: 298 GSKIAAGSADRFVYVWDTTS 317
Score = 127 (49.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 299 TLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGH 358
TL+ H AV L +TDG++L+S + D+++ VW D ++G V + L+GH
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW-----------DSETGERVKR--LKGH 151
Query: 359 TKAI-LCLAVVSN--LLFSGSSDNTIRIW--RRSSSVTDHQKGYSCLAV 402
T + C L+ +GS D T+++W R+ +++ Q Y LAV
Sbjct: 152 TSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAV 200
Score = 54 (24.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
+ TS + SG +D +IK+W +R
Sbjct: 203 NDTSDQIISGGIDNDIKVWDLR 224
Score = 41 (19.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
S S+L+ S ++D +++W +R
Sbjct: 246 SEGSYLL-SNAMDNTVRVWDVR 266
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 60/260 (23%), Positives = 109/260 (41%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYST---SGKLKNKYYERIATL--PTLNDRFTKCFL 191
G L SA D I +W + + Y + SG + +Y ++ D+ +
Sbjct: 79 GSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD 138
Query: 192 ANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXT-SWDRTFKIWRTSDFRCLESVKN 250
+ +V+R K H V T S D T K+W +++ +N
Sbjct: 139 SETGERVKRLKG-----HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN 193
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTAL 310
+ + A+ + ++D + +G D IKVW L+ NK L T+ H +VT L
Sbjct: 194 TYQ--VLAVTFNDTSDQII-SGGIDNDIKVWD-----LRQNK---LTYTMRGHADSVTGL 242
Query: 311 ALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAIL-CL-AVV 368
+LS++G+ L S A D ++ VW D + + + +G + K +L C +
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVW--DVRPF---APKERCVRIFQGNVHNFEKNLLRCSWSPD 297
Query: 369 SNLLFSGSSDNTIRIWRRSS 388
+ + +GS+D + +W +S
Sbjct: 298 GSKIAAGSADRFVYVWDTTS 317
Score = 127 (49.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 299 TLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGH 358
TL+ H AV L +TDG++L+S + D+++ VW D ++G V + L+GH
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW-----------DSETGERVKR--LKGH 151
Query: 359 TKAI-LCLAVVSN--LLFSGSSDNTIRIW--RRSSSVTDHQKGYSCLAV 402
T + C L+ +GS D T+++W R+ +++ Q Y LAV
Sbjct: 152 TSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAV 200
Score = 54 (24.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
+ TS + SG +D +IK+W +R
Sbjct: 203 NDTSDQIISGGIDNDIKVWDLR 224
Score = 41 (19.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
S S+L+ S ++D +++W +R
Sbjct: 246 SEGSYLL-SNAMDNTVRVWDVR 266
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 60/260 (23%), Positives = 109/260 (41%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYST---SGKLKNKYYERIATL--PTLNDRFTKCFL 191
G L SA D I +W + + Y + SG + +Y ++ D+ +
Sbjct: 79 GSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD 138
Query: 192 ANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXT-SWDRTFKIWRTSDFRCLESVKN 250
+ +V+R K H V T S D T K+W +++ +N
Sbjct: 139 SETGERVKRLKG-----HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN 193
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTAL 310
+ + A+ + ++D + +G D IKVW L+ NK L T+ H +VT L
Sbjct: 194 TYQ--VLAVTFNDTSDQII-SGGIDNDIKVWD-----LRQNK---LTYTMRGHADSVTGL 242
Query: 311 ALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAIL-CL-AVV 368
+LS++G+ L S A D ++ VW D + + + +G + K +L C +
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVW--DVRPF---APKERCVKIFQGNVHNFEKNLLRCSWSPD 297
Query: 369 SNLLFSGSSDNTIRIWRRSS 388
+ + +GS+D + +W +S
Sbjct: 298 GSKIAAGSADRFVYVWDTTS 317
Score = 127 (49.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 299 TLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGH 358
TL+ H AV L +TDG++L+S + D+++ VW D ++G V + L+GH
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW-----------DSETGERVKR--LKGH 151
Query: 359 TKAI-LCLAVVSN--LLFSGSSDNTIRIW--RRSSSVTDHQKGYSCLAV 402
T + C L+ +GS D T+++W R+ +++ Q Y LAV
Sbjct: 152 TSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAV 200
Score = 54 (24.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
+ TS + SG +D +IK+W +R
Sbjct: 203 NDTSDQIISGGIDNDIKVWDLR 224
Score = 41 (19.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
S S+L+ S ++D +++W +R
Sbjct: 246 SEGSYLL-SNAMDNTVRVWDVR 266
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 128 (50.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 35/109 (32%), Positives = 57/109 (52%)
Query: 299 TLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGH 358
TL+ H AV L +TDG++L+S + D+++ VW D ++G V + L+GH
Sbjct: 131 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW-----------DSETGERVKR--LKGH 177
Query: 359 TKAI-LCLAVVSN--LLFSGSSDNTIRIW--RRSSSVTDHQKGYSCLAV 402
T + C L+ +GS D T+++W R+ ++V Q Y LAV
Sbjct: 178 TSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAV 226
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 59/260 (22%), Positives = 109/260 (41%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYST---SGKLKNKYYERIATL--PTLNDRFTKCFL 191
G+ L SA D I +W + + Y + SG + +Y ++ D+ +
Sbjct: 105 GNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD 164
Query: 192 ANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXT-SWDRTFKIWRTSDFRCLESVKN 250
+ +V+R K H V T S D T K+W +++ +N
Sbjct: 165 SETGERVKRLKG-----HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQN 219
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTAL 310
+ + A+ + ++D + +G D IKVW L+ NK L T+ H +VT L
Sbjct: 220 TYQ--VLAVTFNDTSDQII-SGGIDNDIKVWD-----LRQNK---LTYTMRGHADSVTGL 268
Query: 311 ALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAIL-CL-AVV 368
+LS++G+ L S A D ++ +W D + + + +G + K +L C +
Sbjct: 269 SLSSEGSYLLSNAMDNTVRIW--DVRPF---APKERCVKIFQGNVHNFEKNLLRCSWSPD 323
Query: 369 SNLLFSGSSDNTIRIWRRSS 388
+ + GS+D + +W +S
Sbjct: 324 GSKIAGGSADRFVYVWDTTS 343
Score = 54 (24.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
+ TS + SG +D +IK+W +R
Sbjct: 229 NDTSDQIISGGIDNDIKVWDLR 250
Score = 42 (19.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
S S+L+ S ++D ++IW +R
Sbjct: 272 SEGSYLL-SNAMDNTVRIWDVR 292
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 127 (49.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 299 TLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGH 358
TL+ H AV L +TDG++L+S + D+++ VW D ++G V + L+GH
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW-----------DSETGERVKR--LKGH 151
Query: 359 TKAI-LCLAVVSN--LLFSGSSDNTIRIW--RRSSSVTDHQKGYSCLAV 402
T + C L+ +GS D T+++W R+ +++ Q Y LAV
Sbjct: 152 TSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAV 200
Score = 126 (49.4 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 50/202 (24%), Positives = 86/202 (42%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYST---SGKLKNKYYERIATL--PTLNDRFTKCFL 191
G L SA D I +W + + Y + SG + +Y ++ D+ +
Sbjct: 79 GSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD 138
Query: 192 ANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXT-SWDRTFKIWRTSDFRCLESVKN 250
+ +V+R K H V T S D T K+W +++ +N
Sbjct: 139 SETGERVKRLKG-----HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN 193
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTAL 310
+ + A+ + ++D + +G D IKVW L+ NK L T+ H +VT L
Sbjct: 194 TYQ--VLAVTFNDTSDQII-SGGIDNDIKVWD-----LRQNK---LTYTMRGHADSVTGL 242
Query: 311 ALSTDGTVLYSGACDRSILVWE 332
+LS++G+ L S A D ++ VW+
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVWD 264
Score = 54 (24.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
+ TS + SG +D +IK+W +R
Sbjct: 203 NDTSDQIISGGIDNDIKVWDLR 224
Score = 41 (19.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
S S+L+ S ++D +++W +R
Sbjct: 246 SEGSYLL-SNAMDNTVRVWDVR 266
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 135 (52.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 40/114 (35%), Positives = 57/114 (50%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAI-VVSKSNDGFVYTGSADTKIKVWKKLRAA 287
S DR KIW C S+ AHDD++ + V+KS+ +T D KIK W
Sbjct: 605 SADRNVKIWGLDFGDCHRSLF-AHDDSVMYLQFVAKSH--LFFTAGKDNKIKQWDA---- 657
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
K +QTLE H V LALS +G + S + D+S+ +WER + I++
Sbjct: 658 ----DKFEHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWERTREPLILE 707
Score = 57 (25.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 108 VNITSTDVGDHANVVATGNGDAVKSLVV--LGDKLFSAHQDHKIRVWKIDNNTSAY 161
+ I S G+ A+V G+ AV +L LG +L S +D + VW + N + Y
Sbjct: 88 IRIFSLLSGE-ASVAFNGHKAAVTALQYDQLGGRLVSGSKDTDVIVWDVINESGLY 142
>UNIPROTKB|Q05B17 [details] [associations]
symbol:wdr48 "WD repeat-containing protein 48" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:BC123017
RefSeq:NP_001072858.1 UniGene:Str.41632 ProteinModelPortal:Q05B17
STRING:Q05B17 Ensembl:ENSXETT00000009249 GeneID:780319
KEGG:xtr:780319 Xenbase:XB-GENE-976371 Bgee:Q05B17 Uniprot:Q05B17
Length = 678
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 58/218 (26%), Positives = 100/218 (45%)
Query: 231 DRTFKIWRTSDFR---CLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
D +IW + + + S+++ H D +N IV+ N + + S+DT +KVW
Sbjct: 51 DSIIRIWNVNQHKQDPYIASMEH-HTDWVNDIVLC-CNGKTLISASSDTTVKVWNA---- 104
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSG 347
K + TL HK V ALA + D ++ S DR I +W+ + + S
Sbjct: 105 ----HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA----SN 156
Query: 348 HMVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEG 405
+ V +L G+ +I LA+ + ++ SGS++ +R+W + QK L L+G
Sbjct: 157 NTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTC----QK----LMKLKG 208
Query: 406 HRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYS-GSLDC 442
H VK L +++ D + S S + ++S G C
Sbjct: 209 HTDNVKAL--LLNRDGTQCLSGSSDGTIRLWSLGQQRC 244
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 125 (49.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 50/182 (27%), Positives = 82/182 (45%)
Query: 231 DRTFKIWRT-SDFRCLES-VKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D+ IW T S+ S + +AH +N + + ++ + TGSAD + +W LR
Sbjct: 239 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD-LR--- 294
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDG-TVLYSGACDRSILVWERDQ-GNYIVDGDDDS 346
N K L T E HK + + S T+L S DR + VW+ + G D +
Sbjct: 295 --NLKLKL-HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 351
Query: 347 GHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
G L GHT I + N ++ S S DN ++IW+ + ++ + ++ + L
Sbjct: 352 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 411
Query: 404 EG 405
EG
Sbjct: 412 EG 413
Score = 57 (25.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 25/104 (24%), Positives = 48/104 (46%)
Query: 64 QCSATLKVKGNSSYIPSLA----IAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHA 119
+C+ L+++G+ L+ ++G LL S + + W D N + D A
Sbjct: 156 ECNPDLRLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLW--DIN--AGPKEGKIVD-A 209
Query: 120 NVVATGNGDAVKSLV--VLGDKLF-SAHQDHKIRVWKIDNNTSA 160
+ TG+ V+ + +L + LF S D K+ +W +NT++
Sbjct: 210 KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTS 253
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 125 (49.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 50/182 (27%), Positives = 82/182 (45%)
Query: 231 DRTFKIWRT-SDFRCLES-VKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D+ IW T S+ S + +AH +N + + ++ + TGSAD + +W LR
Sbjct: 239 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD-LR--- 294
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDG-TVLYSGACDRSILVWERDQ-GNYIVDGDDDS 346
N K L T E HK + + S T+L S DR + VW+ + G D +
Sbjct: 295 --NLKLKL-HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 351
Query: 347 GHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
G L GHT I + N ++ S S DN ++IW+ + ++ + ++ + L
Sbjct: 352 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 411
Query: 404 EG 405
EG
Sbjct: 412 EG 413
Score = 57 (25.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 25/104 (24%), Positives = 48/104 (46%)
Query: 64 QCSATLKVKGNSSYIPSLA----IAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHA 119
+C+ L+++G+ L+ ++G LL S + + W D N + D A
Sbjct: 156 ECNPDLRLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLW--DIN--AGPKEGKIVD-A 209
Query: 120 NVVATGNGDAVKSLV--VLGDKLF-SAHQDHKIRVWKIDNNTSA 160
+ TG+ V+ + +L + LF S D K+ +W +NT++
Sbjct: 210 KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTS 253
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 130 (50.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 39/114 (34%), Positives = 56/114 (49%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAI-VVSKSNDGFVYTGSADTKIKVWKKLRAA 287
S DR KIW C +S+ AHDD++ + V KS+ +T D KIK W
Sbjct: 610 SADRNVKIWGLDFGDCHKSLF-AHDDSVMYLKFVPKSH--LFFTAGKDRKIKQWDA---- 662
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
K VQTLE H + LA+S G + S + D+S+ +WER + I++
Sbjct: 663 ----DKFEHVQTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLWERTREPLILE 712
Score = 61 (26.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 108 VNITSTDVGDHANVVATGNGDAVKSLVV--LGDKLFSAHQDHKIRVWKIDNNTSAY 161
+ I S G+ NV G+ AV SL LG +L S +D I VW + N + Y
Sbjct: 89 IRIFSLLSGE-GNVTFNGHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLY 143
>WB|WBGene00017435 [details] [associations]
symbol:F13H8.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006898 GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:FO080709 RefSeq:NP_495256.1
ProteinModelPortal:Q19433 SMR:Q19433 DIP:DIP-25827N
MINT:MINT-1128581 STRING:Q19433 PaxDb:Q19433 EnsemblMetazoa:F13H8.2
GeneID:174038 KEGG:cel:CELE_F13H8.2 UCSC:F13H8.2 CTD:174038
WormBase:F13H8.2 InParanoid:Q19433 NextBio:882237 Uniprot:Q19433
Length = 929
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 34/113 (30%), Positives = 59/113 (52%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S D++ K+W C +S +AHDDA+ +++ + ++ D KIK W +
Sbjct: 605 SVDKSVKVWGLDFGDCHKSF-HAHDDAVTSVLFCPGEEQLFWSAGKDGKIKQWDAV---- 659
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
K +VQ L++H + LA T+G+V++S + D+SI WE+ IV+
Sbjct: 660 ----KFIMVQVLDRHTLDIRCLAQFTNGSVMFSASHDKSIRCWEKTDEILIVE 708
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 125 (49.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 50/182 (27%), Positives = 82/182 (45%)
Query: 231 DRTFKIWRT-SDFRCLES-VKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D+ IW T S+ S + +AH +N + + ++ + TGSAD + +W LR
Sbjct: 248 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD-LR--- 303
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDG-TVLYSGACDRSILVWERDQ-GNYIVDGDDDS 346
N K L T E HK + + S T+L S DR + VW+ + G D +
Sbjct: 304 --NLKLKL-HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
Query: 347 GHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
G L GHT I + N ++ S S DN ++IW+ + ++ + ++ + L
Sbjct: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 420
Query: 404 EG 405
EG
Sbjct: 421 EG 422
Score = 57 (25.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 25/104 (24%), Positives = 48/104 (46%)
Query: 64 QCSATLKVKGNSSYIPSLA----IAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHA 119
+C+ L+++G+ L+ ++G LL S + + W D N + D A
Sbjct: 165 ECNPDLRLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLW--DIN--AGPKEGKIVD-A 218
Query: 120 NVVATGNGDAVKSLV--VLGDKLF-SAHQDHKIRVWKIDNNTSA 160
+ TG+ V+ + +L + LF S D K+ +W +NT++
Sbjct: 219 KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTS 262
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 125 (49.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 50/182 (27%), Positives = 82/182 (45%)
Query: 231 DRTFKIWRT-SDFRCLES-VKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D+ IW T S+ S + +AH +N + + ++ + TGSAD + +W LR
Sbjct: 248 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD-LR--- 303
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDG-TVLYSGACDRSILVWERDQ-GNYIVDGDDDS 346
N K L T E HK + + S T+L S DR + VW+ + G D +
Sbjct: 304 --NLKLKL-HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
Query: 347 GHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
G L GHT I + N ++ S S DN ++IW+ + ++ + ++ + L
Sbjct: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 420
Query: 404 EG 405
EG
Sbjct: 421 EG 422
Score = 57 (25.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 25/104 (24%), Positives = 48/104 (46%)
Query: 64 QCSATLKVKGNSSYIPSLA----IAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHA 119
+C+ L+++G+ L+ ++G LL S + + W D N + D A
Sbjct: 165 ECNPDLRLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLW--DIN--AGPKEGKIVD-A 218
Query: 120 NVVATGNGDAVKSLV--VLGDKLF-SAHQDHKIRVWKIDNNTSA 160
+ TG+ V+ + +L + LF S D K+ +W +NT++
Sbjct: 219 KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTS 262
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 125 (49.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 50/182 (27%), Positives = 82/182 (45%)
Query: 231 DRTFKIWRT-SDFRCLES-VKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D+ IW T S+ S + +AH +N + + ++ + TGSAD + +W LR
Sbjct: 248 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD-LR--- 303
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDG-TVLYSGACDRSILVWERDQ-GNYIVDGDDDS 346
N K L T E HK + + S T+L S DR + VW+ + G D +
Sbjct: 304 --NLKLKL-HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
Query: 347 GHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
G L GHT I + N ++ S S DN ++IW+ + ++ + ++ + L
Sbjct: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 420
Query: 404 EG 405
EG
Sbjct: 421 EG 422
Score = 57 (25.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 25/104 (24%), Positives = 48/104 (46%)
Query: 64 QCSATLKVKGNSSYIPSLA----IAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHA 119
+C+ L+++G+ L+ ++G LL S + + W D N + D A
Sbjct: 165 ECNPDLRLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLW--DIN--AGPKEGKIVD-A 218
Query: 120 NVVATGNGDAVKSLV--VLGDKLF-SAHQDHKIRVWKIDNNTSA 160
+ TG+ V+ + +L + LF S D K+ +W +NT++
Sbjct: 219 KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTS 262
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 125 (49.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 50/182 (27%), Positives = 82/182 (45%)
Query: 231 DRTFKIWRT-SDFRCLES-VKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D+ IW T S+ S + +AH +N + + ++ + TGSAD + +W LR
Sbjct: 248 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD-LR--- 303
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDG-TVLYSGACDRSILVWERDQ-GNYIVDGDDDS 346
N K L T E HK + + S T+L S DR + VW+ + G D +
Sbjct: 304 --NLKLKL-HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
Query: 347 GHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
G L GHT I + N ++ S S DN ++IW+ + ++ + ++ + L
Sbjct: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 420
Query: 404 EG 405
EG
Sbjct: 421 EG 422
Score = 57 (25.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 25/104 (24%), Positives = 48/104 (46%)
Query: 64 QCSATLKVKGNSSYIPSLA----IAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHA 119
+C+ L+++G+ L+ ++G LL S + + W D N + D A
Sbjct: 165 ECNPDLRLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLW--DIN--AGPKEGKIVD-A 218
Query: 120 NVVATGNGDAVKSLV--VLGDKLF-SAHQDHKIRVWKIDNNTSA 160
+ TG+ V+ + +L + LF S D K+ +W +NT++
Sbjct: 219 KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTS 262
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 125 (49.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 50/182 (27%), Positives = 82/182 (45%)
Query: 231 DRTFKIWRT-SDFRCLES-VKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D+ IW T S+ S + +AH +N + + ++ + TGSAD + +W LR
Sbjct: 248 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD-LR--- 303
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDG-TVLYSGACDRSILVWERDQ-GNYIVDGDDDS 346
N K L T E HK + + S T+L S DR + VW+ + G D +
Sbjct: 304 --NLKLKL-HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
Query: 347 GHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
G L GHT I + N ++ S S DN ++IW+ + ++ + ++ + L
Sbjct: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL 420
Query: 404 EG 405
EG
Sbjct: 421 EG 422
Score = 57 (25.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 25/104 (24%), Positives = 48/104 (46%)
Query: 64 QCSATLKVKGNSSYIPSLA----IAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHA 119
+C+ L+++G+ L+ ++G LL S + + W D N + D A
Sbjct: 165 ECNPDLRLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLW--DIN--AGPKEGKIVD-A 218
Query: 120 NVVATGNGDAVKSLV--VLGDKLF-SAHQDHKIRVWKIDNNTSA 160
+ TG+ V+ + +L + LF S D K+ +W +NT++
Sbjct: 219 KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTS 262
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 125 (49.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 50/182 (27%), Positives = 82/182 (45%)
Query: 231 DRTFKIWRT-SDFRCLES-VKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D+ IW T S+ S + +AH +N + + ++ + TGSAD + +W LR
Sbjct: 248 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD-LR--- 303
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDG-TVLYSGACDRSILVWERDQ-GNYIVDGDDDS 346
N K L T E HK + + S T+L S DR + VW+ + G D +
Sbjct: 304 --NLKLKL-HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
Query: 347 GHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
G L GHT I + N ++ S S DN ++IW+ + ++ + ++ + L
Sbjct: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 420
Query: 404 EG 405
EG
Sbjct: 421 EG 422
Score = 57 (25.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 25/104 (24%), Positives = 48/104 (46%)
Query: 64 QCSATLKVKGNSSYIPSLA----IAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHA 119
+C+ L+++G+ L+ ++G LL S + + W D N + D A
Sbjct: 165 ECNPDLRLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLW--DIN--AGPKEGKIVD-A 218
Query: 120 NVVATGNGDAVKSLV--VLGDKLF-SAHQDHKIRVWKIDNNTSA 160
+ TG+ V+ + +L + LF S D K+ +W +NT++
Sbjct: 219 KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTS 262
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 128 (50.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 60/260 (23%), Positives = 109/260 (41%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYST---SGKLKNKYYERIATL--PTLNDRFTKCFL 191
G L SA D I +W + + Y + SG + +Y ++ D+ +
Sbjct: 78 GSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD 137
Query: 192 ANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXT-SWDRTFKIWRTSDFRCLESVKN 250
+ +V+R K H V T S D T K+W +++ +N
Sbjct: 138 SETGERVKRLKG-----HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN 192
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTAL 310
+ + A+ + ++D + +G D IKVW L+ NK L T+ H +VT L
Sbjct: 193 TYQ--VLAVTFNDTSDQII-SGGIDNDIKVWD-----LRQNK---LTYTMRGHADSVTGL 241
Query: 311 ALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAIL-CL-AVV 368
+LS++G+ L S A D ++ VW D + + + +G + K +L C +
Sbjct: 242 SLSSEGSYLLSNAMDNTVRVW--DVRPF---APKERCVKIFQGNVHNFEKNLLRCSWSPD 296
Query: 369 SNLLFSGSSDNTIRIWRRSS 388
+ + +GS+D + +W +S
Sbjct: 297 GSKIAAGSADRFVYVWDTTS 316
Score = 127 (49.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 299 TLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGH 358
TL+ H AV L +TDG++L+S + D+++ VW D ++G V + L+GH
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVW-----------DSETGERVKR--LKGH 150
Query: 359 TKAI-LCLAVVSN--LLFSGSSDNTIRIW--RRSSSVTDHQKGYSCLAV 402
T + C L+ +GS D T+++W R+ +++ Q Y LAV
Sbjct: 151 TSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAV 199
Score = 54 (24.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
+ TS + SG +D +IK+W +R
Sbjct: 202 NDTSDQIISGGIDNDIKVWDLR 223
Score = 41 (19.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
S S+L+ S ++D +++W +R
Sbjct: 245 SEGSYLL-SNAMDNTVRVWDVR 265
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 48/153 (31%), Positives = 71/153 (46%)
Query: 248 VKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAV 307
V AH AINA+ ++ ND + T SAD + +W LR Q + H TLE H+ V
Sbjct: 276 VIQAHSKAINAVAINPFNDYLLATASADKTVALWD-LRNPYQ--RLH----TLEGHEDEV 328
Query: 308 TALALST-DGTVLYSGACDRSILVWERDQ-GNYIVDGDDDSGHMVLKGALRGHTKAILCL 365
L S D +L S + DR + +W+ ++ G D + G L GHT I
Sbjct: 329 YGLEWSPHDEPILASSSTDRRVCIWDLEKIGEEQTPEDAEDGSPELLFMHGGHTNRISEF 388
Query: 366 AVVSN---LLFSGSSDNTIRIWRRSSSV--TDH 393
+ N ++ S + DN ++IW S + DH
Sbjct: 389 SWCPNERWVVGSLADDNILQIWSPSRVIWGRDH 421
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 126 (49.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 34/104 (32%), Positives = 55/104 (52%)
Query: 239 TSDFRCLESVKNAHDDAINAIVVSK-SNDG--FVYTGSADTKIKVWKKLRAALQVNKKHS 295
++ + L ++AH+DAI ++ K SNDG V +GS D +KVWK L+
Sbjct: 2 STQYSILFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLE------ 55
Query: 296 LVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYI 339
L TLE H+ V ++ +S G ++ S + D I +W+ + G I
Sbjct: 56 LQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQI 99
Score = 50 (22.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 24/70 (34%), Positives = 30/70 (42%)
Query: 360 KAILCLAVVSN--LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAVV 417
K IL +A + L SG+ D I I+ D G L LEGH P++ LT
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIF-------DIATG-KLLHTLEGHAMPIRSLTFSP 200
Query: 418 DSDYSNRNSD 427
DS SD
Sbjct: 201 DSQLLVTASD 210
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 137 (53.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 58/256 (22%), Positives = 109/256 (42%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAY---YSTSGKLKNKYYERIATLP--TLNDRFTKCFL 191
G S D +I +W + + Y G + + + R + + + +D +
Sbjct: 62 GSYFASGGMDRQILLWNVFGDVKNYGVLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWD 121
Query: 192 ANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXT-SWDRTFKIWRTSDFRCLESVKN 250
A + ++R+HK H V + S D T K+W + C+++++
Sbjct: 122 AVSGQKIRKHKG-----HAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIEE 176
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTAL 310
+ + A+ +++ V+ G D IK+W LR N S V L+ HK +T+L
Sbjct: 177 KYP--LTAVAIAQQGTQ-VFIGGIDGAIKIWD-LR-----NNHCSHV--LKGHKDIITSL 225
Query: 311 ALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN 370
A+S DG+ L S + D ++ ++ D + + +GA+ G +L +A N
Sbjct: 226 AISKDGSSLLSNSMDNTVRIF--DVKPF---ASAQRQLQIFEGAIHGQEHNLLGVAWSRN 280
Query: 371 LLF--SGSSDNTIRIW 384
F +GSSD + +W
Sbjct: 281 SRFVGAGSSDKNVYVW 296
>ZFIN|ZDB-GENE-070112-1172 [details] [associations]
symbol:zgc:158357 "zgc:158357" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-070112-1172 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013258 Pfam:PF08232
EMBL:GQ131851 IPI:IPI00805985 UniGene:Dr.90294
ProteinModelPortal:C5MQH8 Uniprot:C5MQH8
Length = 782
Score = 142 (55.0 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 44/159 (27%), Positives = 70/159 (44%)
Query: 247 SVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL----VQTLEK 302
+++N H D+I + + T S D +K+W L+ K +L + T
Sbjct: 460 TLRN-HFDSIRGLAFHPIEPVLI-TASEDHTLKMWN-LQKTAPAKKCAALDVEPIYTFRA 516
Query: 303 HKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAI 362
H+ V +S+ G +SG D +I W N +D D VL+G+L GHT A+
Sbjct: 517 HRGPVLCEVMSSSGEQCFSGGLDGTIQSWNTPNPN--IDPYDSYESSVLRGSLSGHTDAV 574
Query: 363 --LCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSC 399
L + L S S+D T+R+W S D + +C
Sbjct: 575 WGLVFSSAHQRLLSCSADGTVRLW----SAADTEPAIAC 609
Score = 45 (20.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 437 SGSLDCEIKIWQI 449
SGS DC +++W +
Sbjct: 725 SGSHDCSVRLWNM 737
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 125 (49.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 50/182 (27%), Positives = 82/182 (45%)
Query: 231 DRTFKIWRT-SDFRCLES-VKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D+ IW T S+ S + +AH +N + + ++ + TGSAD + +W LR
Sbjct: 292 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD-LR--- 347
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDG-TVLYSGACDRSILVWERDQ-GNYIVDGDDDS 346
N K L T E HK + + S T+L S DR + VW+ + G D +
Sbjct: 348 --NLKLKL-HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 404
Query: 347 GHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
G L GHT I + N ++ S S DN ++IW+ + ++ + ++ + L
Sbjct: 405 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 464
Query: 404 EG 405
EG
Sbjct: 465 EG 466
Score = 57 (25.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 25/104 (24%), Positives = 48/104 (46%)
Query: 64 QCSATLKVKGNSSYIPSLA----IAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHA 119
+C+ L+++G+ L+ ++G LL S + + W D N + D A
Sbjct: 209 ECNPDLRLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLW--DIN--AGPKEGKIVD-A 262
Query: 120 NVVATGNGDAVKSLV--VLGDKLF-SAHQDHKIRVWKIDNNTSA 160
+ TG+ V+ + +L + LF S D K+ +W +NT++
Sbjct: 263 KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTS 306
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 125 (49.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 50/182 (27%), Positives = 82/182 (45%)
Query: 231 DRTFKIWRT-SDFRCLES-VKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D+ IW T S+ S + +AH +N + + ++ + TGSAD + +W LR
Sbjct: 292 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD-LR--- 347
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDG-TVLYSGACDRSILVWERDQ-GNYIVDGDDDS 346
N K L T E HK + + S T+L S DR + VW+ + G D +
Sbjct: 348 --NLKLKL-HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 404
Query: 347 GHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
G L GHT I + N ++ S S DN ++IW+ + ++ + ++ + L
Sbjct: 405 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 464
Query: 404 EG 405
EG
Sbjct: 465 EG 466
Score = 57 (25.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 25/104 (24%), Positives = 48/104 (46%)
Query: 64 QCSATLKVKGNSSYIPSLA----IAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHA 119
+C+ L+++G+ L+ ++G LL S + + W D N + D A
Sbjct: 209 ECNPDLRLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLW--DIN--AGPKEGKIVD-A 262
Query: 120 NVVATGNGDAVKSLV--VLGDKLF-SAHQDHKIRVWKIDNNTSA 160
+ TG+ V+ + +L + LF S D K+ +W +NT++
Sbjct: 263 KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTS 306
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 126 (49.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 51/178 (28%), Positives = 76/178 (42%)
Query: 243 RCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEK 302
RC S++ H +A+ ++ S + ++ +GS DT ++ W Q T +
Sbjct: 118 RCTSSLEG-HTEAVISVAFSPTGK-YLASGSGDTTVRFWDLSTETPQF--------TAKG 167
Query: 303 HKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAI 362
H+ V ++A S DG L SG + I +W+ GN I G + L GH+K I
Sbjct: 168 HRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQI-------GRV-----LTGHSKWI 215
Query: 363 LCLA-------VVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCL 413
CL L S S D +IRIW D G C +L GH + V C+
Sbjct: 216 TCLCWEPLHINPECRYLASASKDGSIRIW-------DTLMG-RCDKILTGHTQSVTCV 265
Score = 116 (45.9 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 42/159 (26%), Positives = 67/159 (42%)
Query: 231 DRTFKIWRTS-DFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQ 289
D T +WR + D + LE + H IN ++ S + + S D IK+W+
Sbjct: 363 DFTLFLWRPAEDKKPLERM-TGHQALINQVLFSPDTR-IIASASFDKSIKLWE------- 413
Query: 290 VNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHM 349
+ + +L H SAV +A S D +L SG+ D ++ VW+ + +D
Sbjct: 414 -GRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAID-------- 464
Query: 350 VLKGALRGHTKAILCL--AVVSNLLFSGSSDNTIRIWRR 386
L GH + + + SG D +RIWRR
Sbjct: 465 -----LPGHADEVFATDWSPDGQRVASGGKDKCLRIWRR 498
Score = 106 (42.4 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 32/95 (33%), Positives = 47/95 (49%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S D + +IW T RC + + H ++ V DG +Y+ S D IKVW+
Sbjct: 236 SKDGSIRIWDTLMGRC-DKILTGHTQSVTC--VKWGGDGLLYSSSQDRTIKVWR------ 286
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGA 323
++ L +TL+ H V +ALSTD VL +GA
Sbjct: 287 --SQDGILCRTLQGHAHWVNTMALSTD-YVLRTGA 318
Score = 98 (39.6 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S+D++ K+W + L S++ H A+ I S ++ + +GS+D+ +KVW L
Sbjct: 404 SFDKSIKLWEGRTGKYLTSLRG-HVSAVYQIAWS-ADSRLLVSGSSDSTLKVWDAETKKL 461
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWER 333
++ L H V A S DG + SG D+ + +W R
Sbjct: 462 AID--------LPGHADEVFATDWSPDGQRVASGGKDKCLRIWRR 498
Score = 55 (24.4 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 108 VNITSTDVGDHANVVATGNGDAVKSLVVLGDKL-FSAHQDHKIRVWK 153
+ I T +G + + TG+ +V + GD L +S+ QD I+VW+
Sbjct: 241 IRIWDTLMG-RCDKILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVWR 286
Score = 50 (22.7 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 64 QCSATLKVKGNSSYIPSLAIA--GKLLYGGSSNGEIRAWN 101
+C+++L+ G++ + S+A + GK L GS + +R W+
Sbjct: 118 RCTSSLE--GHTEAVISVAFSPTGKYLASGSGDTTVRFWD 155
Score = 50 (22.7 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 26/90 (28%), Positives = 40/90 (44%)
Query: 72 KGNSSYIPSLAIA--GKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDA 129
KG+ ++ S+A + GK L G N +I W DP T +G V TG+
Sbjct: 166 KGHRHWVLSIAWSPDGKKLASGCKNSQIFLW--DP-----ATGNQIGR----VLTGHSKW 214
Query: 130 VKSL----VVLGDK---LFSAHQDHKIRVW 152
+ L + + + L SA +D IR+W
Sbjct: 215 ITCLCWEPLHINPECRYLASASKDGSIRIW 244
Score = 46 (21.3 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 429 SSTSFLVYSGSLDCEIKIW 447
S+ S L+ SGS D +K+W
Sbjct: 436 SADSRLLVSGSSDSTLKVW 454
Score = 39 (18.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 434 LVYSGSLDCEIKIWQIR 450
++ S S D IK+W+ R
Sbjct: 399 IIASASFDKSIKLWEGR 415
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 136 (52.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 65/287 (22%), Positives = 113/287 (39%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYV 196
G+ L + D I++W D N S + K R+A P F A+ +
Sbjct: 36 GEILATCANDKYIQIWSKDTNGKWGLVQSLEGHEKTVRRVAWSPCGRFLAGASFDASTSI 95
Query: 197 QVRRHKKCTWVH------HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRT---SDFRCLES 247
+ + + H H V S D++ IW+ +DF CL S
Sbjct: 96 WEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQMEDDNDFECL-S 154
Query: 248 VKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAV 307
+ + H I V+ N+ + + S D IK WK ++ + TL H+S++
Sbjct: 155 INSGHGQDIKC-VLWHPNEELLASSSYDDTIKFWK------DIDGDWECINTLTGHESSI 207
Query: 308 TALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCL-- 365
LA + DG L S D+ +L W+ D+ N + + K +++ I +
Sbjct: 208 WDLAFNKDGDKLVSCGEDKLVLFWKFDKEN-------EKWINIFKFK-NENSRPIYSIDW 259
Query: 366 AVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKC 412
+ ++N + +GS+D++I + + S T K L H V C
Sbjct: 260 SSLTNTIVTGSADDSIIFYEQESDDTP-DKYKIILKKKNAHDSDVNC 305
Score = 134 (52.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 44/151 (29%), Positives = 70/151 (46%)
Query: 265 NDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGAC 324
N + T + D I++W K N K LVQ+LE H+ V +A S G L +
Sbjct: 35 NGEILATCANDKYIQIWSK-----DTNGKWGLVQSLEGHEKTVRRVAWSPCGRFLAGASF 89
Query: 325 DRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN--LLFSGSSDNTIR 382
D S +WE+ + + H+ +L GHT + +A S LL + S D +I
Sbjct: 90 DASTSIWEKSKDEL------EFTHV---SSLEGHTYEVKSVAWDSTGTLLATCSRDKSIW 140
Query: 383 IWRRSSSVTDHQKGYSCLAVLEGHRRPVKCL 413
IW+ D+ + CL++ GH + +KC+
Sbjct: 141 IWQMED---DND--FECLSINSGHGQDIKCV 166
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 129 (50.5 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 38/118 (32%), Positives = 58/118 (49%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAI-VVSKSNDGFVYTGSADTKIKVWKKLRAA 287
S DR KIW C +S+ AHDD++ + V KS+ +T D KIK W
Sbjct: 610 SADRNVKIWGLDFGDCHKSLF-AHDDSVMYLRFVPKSH--LFFTAGKDRKIKQWDA---- 662
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDD 345
K +QTLE H + LA+S G + S + D+S+ +WER + I++ + +
Sbjct: 663 ----DKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWERTREPLILEEEKE 716
Score = 60 (26.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 108 VNITSTDVGDHANVVATGNGDAVKSLVV--LGDKLFSAHQDHKIRVWKIDNNTSAY 161
+ I S G+ NV G+ A+ SL LG +L S +D I VW + N + Y
Sbjct: 89 IRIFSLLSGE-GNVTFNGHKAAITSLKYDQLGGRLASGSKDTDIIVWDVINESGLY 143
>TAIR|locus:2092722 [details] [associations]
symbol:LST8-1 "AT3G18140" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005768 "endosome"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0048571
"long-day photoperiodism" evidence=IMP] [GO:1900088 "regulation of
inositol biosynthetic process" evidence=IMP] [GO:1900091
"regulation of raffinose biosynthetic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002686 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005768 InterPro:IPR020472
PRINTS:PR00320 EMBL:AB020749 HSSP:P16649 GO:GO:0048571 OMA:NNKGNCY
EMBL:AY087463 EMBL:BT002312 IPI:IPI00542303 RefSeq:NP_188442.1
UniGene:At.6055 ProteinModelPortal:Q9LV27 SMR:Q9LV27 IntAct:Q9LV27
STRING:Q9LV27 PRIDE:Q9LV27 EnsemblPlants:AT3G18140.1 GeneID:821339
KEGG:ath:AT3G18140 TAIR:At3g18140 InParanoid:Q9LV27
PhylomeDB:Q9LV27 ProtClustDB:CLSN2683726 Genevestigator:Q9LV27
GO:GO:1900088 GO:GO:1900091 Uniprot:Q9LV27
Length = 305
Score = 135 (52.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 75/314 (23%), Positives = 132/314 (42%)
Query: 140 LFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYVQVR 199
L +A DH IR W+ + T Y T + + + R+ P + C V
Sbjct: 8 LATASYDHTIRFWEAE--TGRCYRTI-QYPDSHVNRLEITPDKHYLAAACNPHIRLFDVN 64
Query: 200 RHKK---CTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAI 256
+ T+ H + V S D T KIW C + ++ A+
Sbjct: 65 SNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVA--AV 122
Query: 257 NAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDG 316
N +V+ + + +G + I+VW LRA + LV ++ +AV +L + DG
Sbjct: 123 NTVVLHPNQTELI-SGDQNGNIRVWD-LRAN---SCSCELVPEVD---TAVRSLTVMWDG 174
Query: 317 TVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGS 376
T++ + + VW +G + + + H + A GH L L+ + L + S
Sbjct: 175 TMVVAANNRGTCYVWRLLRGKQTMT-EFEPLHKLQ--AHNGHILKCL-LSPANKYLATAS 230
Query: 377 SDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPV-KCLTAVVDSDYS-NRNSDHSSTSFL 434
SD T++IW D G+ VL GH+R V C+ +V D ++ +SD ++ +
Sbjct: 231 SDKTVKIWN-----VD---GFKLEKVLTGHQRWVWDCVFSV-DGEFLVTASSDMTARLWS 281
Query: 435 VYSGSLDCEIKIWQ 448
+ +G E+K++Q
Sbjct: 282 MPAGK---EVKVYQ 292
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 145 (56.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 61/271 (22%), Positives = 113/271 (41%)
Query: 155 DNNTSAYYSTSGKLKNK---YYERIATLPTLNDRFTKCFLANNYVQVR----RHKKCTWV 207
D+N Y + S +L+ + Y E + + L + +A+N ++ + C +
Sbjct: 310 DHNLLLYEARSLQLQKQFAGYSEEVLDVRFLGPEDSHIVVASNSPSLKVFELQTMTCQIL 369
Query: 208 H-HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVK--NAHDDAINAIVVSKS 264
H H D V + D++ IWR + + V + H ++ I S+
Sbjct: 370 HGHTDIVLALDVFRKGRLFASCAKDQSICIWRMNKAGRVACVAQGSGHTHSVGTICCSRL 429
Query: 265 NDGFVYTGSADTKIKVWKKLRAALQVNKKHS----LVQ---TLEKHKSAVTALALSTDGT 317
+ F+ TGS D +K+W A L L+Q T H + ++A++ +
Sbjct: 430 KETFLVTGSQDCTVKLWPIPEALLSKGTAPDSGPILLQAQATQRCHDKDINSVAVAPNDK 489
Query: 318 VLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCL--AVVSNLLFSG 375
+L +G+ DR+ +W H L G GH + + C+ + + +L +
Sbjct: 490 LLATGSQDRTAKLWALP-------------HCQLLGIFSGHRRGLWCVQFSPMDQVLATA 536
Query: 376 SSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
S+D TI++W ++ D +SCL EGH
Sbjct: 537 SADGTIKLW----ALQD----FSCLKTFEGH 559
Score = 41 (19.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 140 LFSAHQDHKIRVWKIDNNT-----SAYYS 163
LFS+ D IR+W + + + +A+YS
Sbjct: 165 LFSSAADATIRMWSLQDQSCLAVMTAHYS 193
>CGD|CAL0002484 [details] [associations]
symbol:CDC4 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IGI] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin
ligase complex" evidence=IGI] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IGI] [GO:0044182 "filamentous growth
of a population of unicellular organisms" evidence=IMP] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0007126 "meiosis" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 51/192 (26%), Positives = 94/192 (48%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK-KLRAALQ 289
D+ I+ T + ++ V H+ + A+ K + TGS D ++VW K
Sbjct: 428 DKCILIYSTQTGQLMK-VLEGHEGGVWAL---KYTGNTLVTGSTDRTVRVWNMKTGQCTH 483
Query: 290 VNKKH-SLVQTLEKHKSAVTALALSTDGT--------VLYSGACDRSILVWER----DQG 336
+ + H S ++ L+ AV + + DG +L +G+ D +I VW+ D
Sbjct: 484 IFRGHTSTIRCLDIIHPAV--IGKNQDGEDIVFPEYPLLITGSRDHNIHVWKLPVVDDSQ 541
Query: 337 NYI--VDGDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQ 394
+YI +G+ D+ +++ L GHT+++ ++ N++ SGS D+T+R+W + D
Sbjct: 542 DYIETFEGEFDNPYLI--AVLSGHTQSVRSISGYGNIIISGSYDSTVRVW----DLLDD- 594
Query: 395 KGYSCLAVLEGH 406
G+ C VL+GH
Sbjct: 595 -GH-CTHVLQGH 604
Score = 89 (36.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 300 LEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHT 359
L+ H V + A+ +SG+ D +I VW + G LK L GH
Sbjct: 601 LQGHLDRVYSTAIDFHSKTCFSGSMDSNINVWNFETGE-------------LKKVLVGHA 647
Query: 360 KAILCLAVVSNLLFSGSSDNTIRIW-RRSSSVTDHQKGY 397
+ L +V ++L S ++D T+RIW ++ + KG+
Sbjct: 648 SLVGLLDLVDDVLVSAAADATLRIWDAKTGELRSKLKGH 686
Score = 82 (33.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 33/121 (27%), Positives = 52/121 (42%)
Query: 64 QCSATLKV-KGNSSYIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNI----TST----D 114
Q +KV +G+ + +L G L GS++ +R WN +I TST D
Sbjct: 437 QTGQLMKVLEGHEGGVWALKYTGNTLVTGSTDRTVRVWNMKTGQCTHIFRGHTSTIRCLD 496
Query: 115 VGDHANVVATGNGDAVKSLVVLGDKLFSAHQDHKIRVWKID--NNTSAYYST-SGKLKNK 171
+ H V+ N D + L + +DH I VWK+ +++ Y T G+ N
Sbjct: 497 I-IHPAVIGK-NQDGEDIVFPEYPLLITGSRDHNIHVWKLPVVDDSQDYIETFEGEFDNP 554
Query: 172 Y 172
Y
Sbjct: 555 Y 555
>UNIPROTKB|Q5A9A6 [details] [associations]
symbol:CDC4 "Potential ubiquitin ligase F-box subunit"
species:237561 "Candida albicans SC5314" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=IGI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IGI] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IGI] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 51/192 (26%), Positives = 94/192 (48%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK-KLRAALQ 289
D+ I+ T + ++ V H+ + A+ K + TGS D ++VW K
Sbjct: 428 DKCILIYSTQTGQLMK-VLEGHEGGVWAL---KYTGNTLVTGSTDRTVRVWNMKTGQCTH 483
Query: 290 VNKKH-SLVQTLEKHKSAVTALALSTDGT--------VLYSGACDRSILVWER----DQG 336
+ + H S ++ L+ AV + + DG +L +G+ D +I VW+ D
Sbjct: 484 IFRGHTSTIRCLDIIHPAV--IGKNQDGEDIVFPEYPLLITGSRDHNIHVWKLPVVDDSQ 541
Query: 337 NYI--VDGDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQ 394
+YI +G+ D+ +++ L GHT+++ ++ N++ SGS D+T+R+W + D
Sbjct: 542 DYIETFEGEFDNPYLI--AVLSGHTQSVRSISGYGNIIISGSYDSTVRVW----DLLDD- 594
Query: 395 KGYSCLAVLEGH 406
G+ C VL+GH
Sbjct: 595 -GH-CTHVLQGH 604
Score = 89 (36.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 300 LEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHT 359
L+ H V + A+ +SG+ D +I VW + G LK L GH
Sbjct: 601 LQGHLDRVYSTAIDFHSKTCFSGSMDSNINVWNFETGE-------------LKKVLVGHA 647
Query: 360 KAILCLAVVSNLLFSGSSDNTIRIW-RRSSSVTDHQKGY 397
+ L +V ++L S ++D T+RIW ++ + KG+
Sbjct: 648 SLVGLLDLVDDVLVSAAADATLRIWDAKTGELRSKLKGH 686
Score = 82 (33.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 33/121 (27%), Positives = 52/121 (42%)
Query: 64 QCSATLKV-KGNSSYIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNI----TST----D 114
Q +KV +G+ + +L G L GS++ +R WN +I TST D
Sbjct: 437 QTGQLMKVLEGHEGGVWALKYTGNTLVTGSTDRTVRVWNMKTGQCTHIFRGHTSTIRCLD 496
Query: 115 VGDHANVVATGNGDAVKSLVVLGDKLFSAHQDHKIRVWKID--NNTSAYYST-SGKLKNK 171
+ H V+ N D + L + +DH I VWK+ +++ Y T G+ N
Sbjct: 497 I-IHPAVIGK-NQDGEDIVFPEYPLLITGSRDHNIHVWKLPVVDDSQDYIETFEGEFDNP 554
Query: 172 Y 172
Y
Sbjct: 555 Y 555
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 123 (48.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 50/182 (27%), Positives = 81/182 (44%)
Query: 231 DRTFKIWRT-SDFRCLES-VKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D+ IW T S+ S + +AH +N + + ++ + TGSAD + +W LR
Sbjct: 248 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD-LR--- 303
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDG-TVLYSGACDRSILVWERDQ-GNYIVDGDDDS 346
N K L T E HK + + S T+L S DR + VW+ + G D +
Sbjct: 304 --NLKLKL-HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
Query: 347 GHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
G L GHT I + N ++ S S DN ++IW+ + ++ + ++ L
Sbjct: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTPEL 420
Query: 404 EG 405
EG
Sbjct: 421 EG 422
Score = 57 (25.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 25/104 (24%), Positives = 48/104 (46%)
Query: 64 QCSATLKVKGNSSYIPSLA----IAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHA 119
+C+ L+++G+ L+ ++G LL S + + W D N + D A
Sbjct: 165 ECNPDLRLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLW--DIN--AGPKEGKIVD-A 218
Query: 120 NVVATGNGDAVKSLV--VLGDKLF-SAHQDHKIRVWKIDNNTSA 160
+ TG+ V+ + +L + LF S D K+ +W +NT++
Sbjct: 219 KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTS 262
>DICTYBASE|DDB_G0290687 [details] [associations]
symbol:mhkC "myosin heavy chain kinase C"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0005826 "actomyosin
contractile ring" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IMP] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0005938 "cell cortex" evidence=IEA;IDA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;ISS;IDA] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0045159 "myosin II
binding" evidence=ISS] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0032154 "cleavage furrow"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0290687
GO:GO:0005524 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
GO:GO:0000910 GO:GO:0005826 GO:GO:0018107 GO:GO:0032154 HSSP:P16649
BRENDA:2.7.11.7 EMBL:AAFI02000166 GO:GO:0031037 GO:GO:0045159
GO:GO:0016905 ProtClustDB:CLSZ2846619 EMBL:AB079663 EMBL:AF079447
RefSeq:XP_635600.1 ProteinModelPortal:Q8MY12
EnsemblProtists:DDB0216199 GeneID:8627781 KEGG:ddi:DDB_G0290687
OMA:NTRSSIL Uniprot:Q8MY12
Length = 780
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 56/231 (24%), Positives = 101/231 (43%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQV 290
D K W + + ++ +K +++ +N I + D +YTG D +KVW
Sbjct: 573 DSLVKEWDINTQQTIKEIKESNE--VNTIFIQ---DNLLYTGCNDKTVKVWDM------- 620
Query: 291 NKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMV 350
+ + V+TL H A+ ++ G +L+SG+ D+ I VW G + +
Sbjct: 621 -RSYECVKTLSGHTRAIKSVCAM--GNLLFSGSNDQQIYVWNLATGTILTN--------- 668
Query: 351 LKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIWR-RSSSVTDHQKGYSCLAVLEGHRRP 409
+GH + L +N+L+SGS D TIRIW +++ + K + L +
Sbjct: 669 ----FQGHEGWVKTLYAHNNMLYSGSHDETIRIWDLKTTRCVNTIKCKDRVETLHVTNQG 724
Query: 410 VKCLTA----VVDSD-YSNRNSDHSSTSFL--------VYSGSLDCEIKIW 447
+ + V D Y N S ++ +S L +++GSL +K+W
Sbjct: 725 IFAGSGDWLQVFSHDKYENLASLNTRSSILCLWRNQNQLFTGSLASNLKVW 775
>UNIPROTKB|I3LMJ3 [details] [associations]
symbol:LOC100738291 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50145 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 EMBL:FP102909
Ensembl:ENSSSCT00000027206 Uniprot:I3LMJ3
Length = 512
Score = 117 (46.2 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 42/143 (29%), Positives = 61/143 (42%)
Query: 242 FRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLE 301
F+C + H + + V D +++GS+D IKVW + +TLE
Sbjct: 228 FKC-KGTFVGHQGPVWCLCVYSVGD-LLFSGSSDKTIKVWDTCTT-------YKCQKTLE 278
Query: 302 KHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKA 361
H V LAL G LYSG+ D +I+VW D ++ +R H
Sbjct: 279 GHDGIV--LALCIQGCRLYSGSADCTIIVW-------------DIQNLQKVNTIRAHDNP 323
Query: 362 ILCLAVVSNLLFSGSSDNTIRIW 384
+ L NLLFSGS I++W
Sbjct: 324 VCTLVSSHNLLFSGSL-KAIKVW 345
Score = 113 (44.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 256 INAIVVSKSNDGFVYTGSADTKIKV---WKKLRAALQVNKKHSLVQTLEKHKSAVTALA- 311
++ I V +++ G VY+ + V ++ L + K V+TL H V ALA
Sbjct: 391 LDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQ-VRTLTGHVGTVYALAV 449
Query: 312 LST-DGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN 370
+ST D T ++S + DRS+ VW D +M+ L H ++ LAV
Sbjct: 450 ISTPDQTKVFSASYDRSLRVWSMD-------------NMICTQTLLRHQGSVTALAVSRG 496
Query: 371 LLFSGSSDNTIRIW 384
LFSG+ D+T+++W
Sbjct: 497 RLFSGAVDSTVKVW 510
Score = 106 (42.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 25/57 (43%), Positives = 31/57 (54%)
Query: 352 KGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
KG GH + CL V V +LLFSGSSD TI++W ++ Y C LEGH
Sbjct: 231 KGTFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTT-------YKCQKTLEGH 280
Score = 104 (41.7 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 38/133 (28%), Positives = 64/133 (48%)
Query: 203 KC--TWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRT-SDFRCLESVKNAHDDAINAI 259
KC T+V H V S D+T K+W T + ++C ++++ HD + A+
Sbjct: 229 KCKGTFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQKTLEG-HDGIVLAL 287
Query: 260 VVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVL 319
+ +Y+GSAD I VW +Q +K V T+ H + V L S + +L
Sbjct: 288 CIQGCR---LYSGSADCTIIVWD-----IQNLQK---VNTIRAHDNPVCTLVSSHN--LL 334
Query: 320 YSGACDRSILVWE 332
+SG+ ++I VW+
Sbjct: 335 FSGSL-KAIKVWD 346
Score = 76 (31.8 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 31/103 (30%), Positives = 44/103 (42%)
Query: 312 LSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN- 370
L T G +YS A +V + N I D +S V L GH + LAV+S
Sbjct: 397 LQTSGGSVYSIAVTNHHIVCGTYE-NLIHVWDIESKEQVR--TLTGHVGTVYALAVISTP 453
Query: 371 ---LLFSGSSDNTIRIWRRSSSVTD-----HQKGYSCLAVLEG 405
+FS S D ++R+W + + HQ + LAV G
Sbjct: 454 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRG 496
Score = 69 (29.3 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 63 HQCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAW---NRDPNNYV----NITSTDV 115
++C TL+ G+ + +L I G LY GS++ I W N N + N T V
Sbjct: 271 YKCQKTLE--GHDGIVLALCIQGCRLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLV 328
Query: 116 GDHANVVATGNGDAVKSLVVLGDKL 140
H N++ +G+ A+K ++G +L
Sbjct: 329 SSH-NLLFSGSLKAIKVWDIVGTEL 352
Score = 55 (24.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 435 VYSGSLDCEIKIWQIR 450
+YSGS DC I +W I+
Sbjct: 294 LYSGSADCTIIVWDIQ 309
Score = 42 (19.8 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 435 VYSGSLDCEIKIW 447
++SG++D +K+W
Sbjct: 498 LFSGAVDSTVKVW 510
>RGD|1559653 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=ISO] [GO:0000185 "activation of
MAPKKK activity" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043410 "positive regulation of MAPK
cascade" evidence=ISO] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 RGD:1559653 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 IPI:IPI00198753 ProteinModelPortal:D4A5P7
Ensembl:ENSRNOT00000004222 UCSC:RGD:1559653 ArrayExpress:D4A5P7
Uniprot:D4A5P7
Length = 629
Score = 113 (44.8 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 256 INAIVVSKSNDGFVYTGSADTKIKV---WKKLRAALQVNKKHSLVQTLEKHKSAVTALA- 311
++ I V +++ G VY+ + V ++ L + K V+TL H V ALA
Sbjct: 508 LDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQ-VRTLTGHVGTVYALAV 566
Query: 312 LST-DGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN 370
+ST D T ++S + DRS+ VW D +M+ L H ++ LAV
Sbjct: 567 ISTPDQTKVFSASYDRSLRVWSMD-------------NMICTQTLLRHQGSVTALAVSRG 613
Query: 371 LLFSGSSDNTIRIW 384
LFSG+ D+T+++W
Sbjct: 614 RLFSGAVDSTVKVW 627
Score = 104 (41.7 bits), Expect = 3.4e-06, Sum P(4) = 3.4e-06
Identities = 38/133 (28%), Positives = 64/133 (48%)
Query: 203 KC--TWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRT-SDFRCLESVKNAHDDAINAI 259
KC T+V H V S D+T K+W T + ++C ++++ HD + A+
Sbjct: 346 KCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEG-HDGIVLAL 404
Query: 260 VVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVL 319
+ +Y+GSAD I VW +Q +K V T+ H + V L S + +L
Sbjct: 405 CIQGCK---LYSGSADCTIIVWD-----IQNLQK---VNTIRAHDNPVCTLVSSHN--ML 451
Query: 320 YSGACDRSILVWE 332
+SG+ ++I VW+
Sbjct: 452 FSGSL-KAIKVWD 463
Score = 76 (31.8 bits), Expect = 3.4e-06, Sum P(4) = 3.4e-06
Identities = 31/103 (30%), Positives = 44/103 (42%)
Query: 312 LSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN- 370
L T G +YS A +V + N I D +S V L GH + LAV+S
Sbjct: 514 LQTSGGSVYSIAVTNHHIVCGTYE-NLIHVWDIESKEQVR--TLTGHVGTVYALAVISTP 570
Query: 371 ---LLFSGSSDNTIRIWRRSSSVTD-----HQKGYSCLAVLEG 405
+FS S D ++R+W + + HQ + LAV G
Sbjct: 571 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRG 613
Score = 69 (29.3 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 63 HQCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAW---NRDPNNYV----NITSTDV 115
++C TL+ G+ + +L I G LY GS++ I W N N + N T V
Sbjct: 388 YKCQKTLE--GHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLV 445
Query: 116 GDHANVVATGNGDAVKSLVVLGDKL 140
H N++ +G+ A+K ++G +L
Sbjct: 446 SSH-NMLFSGSLKAIKVWDIVGTEL 469
Score = 42 (19.8 bits), Expect = 3.4e-06, Sum P(4) = 3.4e-06
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 435 VYSGSLDCEIKIW 447
++SG++D +K+W
Sbjct: 615 LFSGAVDSTVKVW 627
Score = 39 (18.8 bits), Expect = 3.4e-06, Sum P(4) = 3.4e-06
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 201 HKKCTWVHHVDT 212
H KCT++ + DT
Sbjct: 222 HSKCTFIGNQDT 233
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 114 (45.2 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 38/117 (32%), Positives = 52/117 (44%)
Query: 268 FVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRS 327
FV +GS DT IK+W V +K + + + H AV L S DG L S A D +
Sbjct: 119 FVASGSLDTDIKLW-------DVRRKGCIFK-YKSHTQAVRCLRFSPDGKWLASAADDHT 170
Query: 328 ILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
+ +W+ G + + SG + + H L L SGSSD TIR W
Sbjct: 171 VKLWDLTAGKVMFEFTGHSGPV---NVVEFHPSEYL--------LASGSSDRTIRFW 216
Score = 71 (30.1 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 61 SEHQCSATLKVKGNSSYIPSLAIAGK--LLYGGSSNGEIRAWNRDP--------NNYVNI 110
S ++ + + + G+++ I SL I+ K L+ GS +G IR W+ + + NI
Sbjct: 49 SVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANI 108
Query: 111 TSTDVGDHANVVATGNGD 128
S D + + VA+G+ D
Sbjct: 109 CSLDFHPYGSFVASGSLD 126
Score = 61 (26.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 22/90 (24%), Positives = 40/90 (44%)
Query: 70 KVKGNSSYIPSLAIA---GKLLYGGSSNGEIRAWN-RDPNNYVNITSTDVGDHANVVATG 125
++ +SS + SL + G+LL G + + W+ PN +++T H + +
Sbjct: 15 EIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTG-----HTTPIESL 69
Query: 126 NGDAVKSLVVLGDKLFSAHQDHKIRVWKID 155
A + L+V G Q IRVW ++
Sbjct: 70 QISAKEELIVAGS------QSGSIRVWDLE 93
>UNIPROTKB|Q6Q0C0 [details] [associations]
symbol:TRAF7 "E3 ubiquitin-protein ligase TRAF7"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=NAS] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0000185 "activation of MAPKKK activity"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0006915 "apoptotic process" evidence=IDA] [GO:0043410 "positive
regulation of MAPK cascade" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0006355 GO:GO:0042981 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016023 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GO:GO:0000185 EMBL:AY569455
EMBL:AL136921 IPI:IPI00395631 IPI:IPI00470778 RefSeq:NP_115647.2
UniGene:Hs.713632 ProteinModelPortal:Q6Q0C0 SMR:Q6Q0C0
IntAct:Q6Q0C0 MINT:MINT-1161375 STRING:Q6Q0C0 PhosphoSite:Q6Q0C0
DMDM:54036486 PaxDb:Q6Q0C0 PRIDE:Q6Q0C0 Ensembl:ENST00000326181
GeneID:84231 KEGG:hsa:84231 UCSC:uc002cow.3 CTD:84231
GeneCards:GC16P002205 HGNC:HGNC:20456 HPA:HPA041229 MIM:606692
neXtProt:NX_Q6Q0C0 PharmGKB:PA134917323 HOGENOM:HOG000220840
HOVERGEN:HBG055270 InParanoid:Q6Q0C0 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 PhylomeDB:Q6Q0C0 ChiTaRS:TRAF7 GenomeRNAi:84231
NextBio:73692 ArrayExpress:Q6Q0C0 Bgee:Q6Q0C0 CleanEx:HS_TRAF7
Genevestigator:Q6Q0C0 GermOnline:ENSG00000131653 Uniprot:Q6Q0C0
Length = 670
Score = 113 (44.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 256 INAIVVSKSNDGFVYTGSADTKIKV---WKKLRAALQVNKKHSLVQTLEKHKSAVTALA- 311
++ I V +++ G VY+ + V ++ L + K V+TL H V ALA
Sbjct: 549 LDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQ-VRTLTGHVGTVYALAV 607
Query: 312 LST-DGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN 370
+ST D T ++S + DRS+ VW D +M+ L H ++ LAV
Sbjct: 608 ISTPDQTKVFSASYDRSLRVWSMD-------------NMICTQTLLRHQGSVTALAVSRG 654
Query: 371 LLFSGSSDNTIRIW 384
LFSG+ D+T+++W
Sbjct: 655 RLFSGAVDSTVKVW 668
Score = 107 (42.7 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 39/133 (29%), Positives = 64/133 (48%)
Query: 203 KC--TWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRT-SDFRCLESVKNAHDDAINAI 259
KC T+V H V S D+T K+W T + ++C ++++ HD + A+
Sbjct: 387 KCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEG-HDGIVLAL 445
Query: 260 VVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVL 319
+ +Y+GSAD I VW +Q +K V T+ H + V L S + VL
Sbjct: 446 CIQGCK---LYSGSADCTIIVWD-----IQNLQK---VNTIRAHDNPVCTLVSSHN--VL 492
Query: 320 YSGACDRSILVWE 332
+SG+ ++I VW+
Sbjct: 493 FSGSL-KAIKVWD 504
Score = 76 (31.8 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 31/103 (30%), Positives = 44/103 (42%)
Query: 312 LSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN- 370
L T G +YS A +V + N I D +S V L GH + LAV+S
Sbjct: 555 LQTSGGSVYSIAVTNHHIVCGTYE-NLIHVWDIESKEQVR--TLTGHVGTVYALAVISTP 611
Query: 371 ---LLFSGSSDNTIRIWRRSSSVTD-----HQKGYSCLAVLEG 405
+FS S D ++R+W + + HQ + LAV G
Sbjct: 612 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRG 654
Score = 72 (30.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 63 HQCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAW---NRDPNNYV----NITSTDV 115
++C TL+ G+ + +L I G LY GS++ I W N N + N T V
Sbjct: 429 YKCQKTLE--GHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLV 486
Query: 116 GDHANVVATGNGDAVKSLVVLGDKL 140
H NV+ +G+ A+K ++G +L
Sbjct: 487 SSH-NVLFSGSLKAIKVWDIVGTEL 510
Score = 42 (19.8 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 435 VYSGSLDCEIKIW 447
++SG++D +K+W
Sbjct: 656 LFSGAVDSTVKVW 668
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 134 (52.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 61/286 (21%), Positives = 109/286 (38%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYV 196
G+ S +D IR+W NT + + + P + F A +
Sbjct: 26 GNSFASCGEDKAIRIWSQSGNTWTTKTILSDGHKRTIREVRWSPCGEYLASASFDATTAI 85
Query: 197 QVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTS---DFRCLESVKNAHD 253
+ T H + V S D++ IW + +F C +V NAH
Sbjct: 86 WSKHECNATLEGHENEVKSVSWSQSGGLLATCSRDKSVWIWEVAGDDEFECA-AVLNAHT 144
Query: 254 DAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALS 313
+ +V S + + + S D IK++ + +AL + TL H S V ++
Sbjct: 145 QDVKRVVWHPSKE-ILASASYDNTIKMYAE--SAL--DSDWDCTATLSSHTSTVWSIDFE 199
Query: 314 TDGTVLYSGACDRSILVWER-DQGNY--IVDGDDDSGHMVLKGALRGHTKAILCLA--VV 368
DG L S + D ++ +W GN I D + + H++A+ ++ +
Sbjct: 200 ADGERLVSCSDDTTLKIWRAYHPGNEAGIATPDKTTVWKCVCTVAGQHSRAVYDVSWCKL 259
Query: 369 SNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEG-HRRPVKCL 413
+ L+ S D+ IRI++ SS + + L E H + V +
Sbjct: 260 TGLIASACGDDGIRIFKESSDSKRDEPTFELLTAEESAHEQDVNAV 305
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 46/194 (23%), Positives = 81/194 (41%)
Query: 231 DRTFKIWRTSD--FRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D+ +IW S + + + H I + S + ++ + S D +W K
Sbjct: 35 DKAIRIWSQSGNTWTTKTILSDGHKRTIREVRWSPCGE-YLASASFDATTAIWSK----- 88
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
H TLE H++ V +++ S G +L + + D+S+ +WE V GDD+
Sbjct: 89 -----HECNATLEGHENEVKSVSWSQSGGLLATCSRDKSVWIWE-------VAGDDE--- 133
Query: 349 MVLKGALRGHTKAILCLA--VVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
L HT+ + + +L S S DNTI+++ S+ +D + C A L H
Sbjct: 134 FECAAVLNAHTQDVKRVVWHPSKEILASASYDNTIKMYAESALDSD----WDCTATLSSH 189
Query: 407 RRPVKCLTAVVDSD 420
V + D +
Sbjct: 190 TSTVWSIDFEADGE 203
>ZFIN|ZDB-GENE-070112-2212 [details] [associations]
symbol:traf7 "TNF receptor-associated factor 7"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-070112-2212 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:BX572621 EMBL:CR450851 EMBL:BC129220
IPI:IPI00488353 RefSeq:NP_001073654.1 UniGene:Dr.124692
Ensembl:ENSDART00000084579 Ensembl:ENSDART00000132703 GeneID:563746
KEGG:dre:563746 InParanoid:A1L1U9 NextBio:20885047 Uniprot:A1L1U9
Length = 639
Score = 112 (44.5 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 39/135 (28%), Positives = 65/135 (48%)
Query: 255 AINAIVVSKSNDGFVYTGSADTKIKV---WKKLRAALQVNKKHSLVQTLEKHKSAVTALA 311
++ + V +++ G VY+ + V ++ L + K V+TL H V ALA
Sbjct: 517 SLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQ-VRTLTGHVGTVYALA 575
Query: 312 -LST-DGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVS 369
+ST D T ++S + DRS+ VW D +M+ L H ++ LAV
Sbjct: 576 VISTPDQTKVFSASYDRSLRVWSMD-------------NMICTQTLLRHQGSVTALAVSR 622
Query: 370 NLLFSGSSDNTIRIW 384
LFSG+ D+T+++W
Sbjct: 623 GRLFSGAVDSTVKVW 637
Score = 72 (30.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 63 HQCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVN-ITSTD------V 115
++C TL+ G+ + +L I G LY GS++ I W+ VN I + D V
Sbjct: 398 YKCQKTLE--GHDGIVLALCIQGNKLYSGSADCTIIVWDIQTLQKVNTIRAHDNPVCTLV 455
Query: 116 GDHANVVATGNGDAVKSLVVLGDKL 140
H N++ +G+ A+K ++G +L
Sbjct: 456 SSH-NMLFSGSLKAIKVWDIVGTEL 479
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 134 (52.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 48/184 (26%), Positives = 83/184 (45%)
Query: 231 DRTFKIW-RTSD-FRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
DR+ +IW R D + C + H + + S + ++ + S D +WKK
Sbjct: 37 DRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGN-YLASASFDATTCIWKKNEDDF 95
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
+ V TLE H++ V ++A + G +L + + D+S+ VWE D+ +D
Sbjct: 96 EC------VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE--------EDEYE 141
Query: 349 MVLKGALRGHTKAILCLA--VVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
V L HT+ + + LL S S D+T++++R + + + C A LEGH
Sbjct: 142 CV--SVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYR------EEEDDWVCCATLEGH 193
Query: 407 RRPV 410
V
Sbjct: 194 ESTV 197
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 135 (52.6 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 54/214 (25%), Positives = 91/214 (42%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVK-NAHDDAINAIVVSKSNDG 267
H D V +S D+T ++W S ESV AH ++ ++ S
Sbjct: 59 HKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKG--ESVLFRAHTGSVRSVCFSADGQS 116
Query: 268 FVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRS 327
+ T S D IK+W V+++ ++ TL +H + V S DG ++ S + DR+
Sbjct: 117 LL-TASDDQSIKLWS-------VHRQ-KIICTLREHNNWVRCARFSPDGQLMVSVSDDRT 167
Query: 328 ILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIWR-R 386
+ +W+ I + G+ + H + C+A + SSDNT+R+W R
Sbjct: 168 VKLWDASSRQLIHTFCEPGGY---SSYVDFHPSST-CIA-------TASSDNTVRVWDIR 216
Query: 387 SSSVTDHQKGYSCLA-VLEGHRRPVKCLTAVVDS 419
+ ++ H + +S L H LTA DS
Sbjct: 217 THTLLQHYQVHSAAVNALSFHPSGNHLLTASSDS 250
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 63/295 (21%), Positives = 117/295 (39%)
Query: 124 TGNGDAVKSLVVLGDK--LFSAHQDHKIRVW--KIDNNTSAYYSTSGKLKNKYY--ERIA 177
TG+ DAV + L S+ +D +R+W + + + + +G +++ + + +
Sbjct: 57 TGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQS 116
Query: 178 TLPTLNDRFTKCFLANNYVQVRRHKK-CTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKI 236
L +D+ K + V R K CT H + V S DRT K+
Sbjct: 117 LLTASDDQSIKLW------SVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKL 170
Query: 237 WRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL 296
W S + + + ++ V + + T S+D ++VW +R H+L
Sbjct: 171 WDASSRQLIHTF--CEPGGYSSYVDFHPSSTCIATASSDNTVRVWD-IRT-------HTL 220
Query: 297 VQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALR 356
+Q + H +AV AL+ G L + + D ++ + + +G + L
Sbjct: 221 LQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLY-------------TLH 267
Query: 357 GHTKAILCLAVV-SNLLF-SGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRP 409
GH + C++ S F S SD + +WR + D+ + L HR P
Sbjct: 268 GHQGSASCVSFSRSGDQFASAGSDQQVMVWRTNFDSVDYSR---VLQQKRDHRTP 319
>MGI|MGI:3042141 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000185 "activation of MAPKKK activity"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=ISA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043410 "positive regulation of MAPK cascade"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:3042141 Pfam:PF00097
Prosite:PS00518 GO:GO:0006915 GO:GO:0006355 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016023
GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GO:GO:0000185 GermOnline:ENSMUSG00000052752 HOGENOM:HOG000220840
HOVERGEN:HBG055270 EMBL:BC005649 EMBL:BC008598 IPI:IPI00474463
UniGene:Mm.275150 ProteinModelPortal:Q922B6 SMR:Q922B6
STRING:Q922B6 PaxDb:Q922B6 PRIDE:Q922B6 UCSC:uc008awq.2
NextBio:377255 Bgee:Q922B6 CleanEx:MM_TRAF7 Genevestigator:Q922B6
Uniprot:Q922B6
Length = 594
Score = 113 (44.8 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 256 INAIVVSKSNDGFVYTGSADTKIKV---WKKLRAALQVNKKHSLVQTLEKHKSAVTALA- 311
++ I V +++ G VY+ + V ++ L + K V+TL H V ALA
Sbjct: 473 LDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQ-VRTLTGHVGTVYALAV 531
Query: 312 LST-DGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN 370
+ST D T ++S + DRS+ VW D +M+ L H ++ LAV
Sbjct: 532 ISTPDQTKVFSASYDRSLRVWSMD-------------NMICTQTLLRHQGSVTALAVSRG 578
Query: 371 LLFSGSSDNTIRIW 384
LFSG+ D+T+++W
Sbjct: 579 RLFSGAVDSTVKVW 592
Score = 104 (41.7 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 38/133 (28%), Positives = 64/133 (48%)
Query: 203 KC--TWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRT-SDFRCLESVKNAHDDAINAI 259
KC T+V H V S D+T K+W T + ++C ++++ HD + A+
Sbjct: 311 KCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEG-HDGIVLAL 369
Query: 260 VVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVL 319
+ +Y+GSAD I VW +Q +K V T+ H + V L S + +L
Sbjct: 370 CIQGCK---LYSGSADCTIIVWD-----IQNLQK---VNTIRAHDNPVCTLVSSHN--ML 416
Query: 320 YSGACDRSILVWE 332
+SG+ ++I VW+
Sbjct: 417 FSGSL-KAIKVWD 428
Score = 76 (31.8 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 31/103 (30%), Positives = 44/103 (42%)
Query: 312 LSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN- 370
L T G +YS A +V + N I D +S V L GH + LAV+S
Sbjct: 479 LQTSGGSVYSIAVTNHHIVCGTYE-NLIHVWDIESKEQVR--TLTGHVGTVYALAVISTP 535
Query: 371 ---LLFSGSSDNTIRIWRRSSSVTD-----HQKGYSCLAVLEG 405
+FS S D ++R+W + + HQ + LAV G
Sbjct: 536 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRG 578
Score = 69 (29.3 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 63 HQCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAW---NRDPNNYV----NITSTDV 115
++C TL+ G+ + +L I G LY GS++ I W N N + N T V
Sbjct: 353 YKCQKTLE--GHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLV 410
Query: 116 GDHANVVATGNGDAVKSLVVLGDKL 140
H N++ +G+ A+K ++G +L
Sbjct: 411 SSH-NMLFSGSLKAIKVWDIVGTEL 434
Score = 42 (19.8 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 435 VYSGSLDCEIKIW 447
++SG++D +K+W
Sbjct: 580 LFSGAVDSTVKVW 592
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 127 (49.8 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 52/229 (22%), Positives = 99/229 (43%)
Query: 233 TFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNK 292
T K+W F C+ ++ + HD ++++ + + D V + S D IK+W+ +Q
Sbjct: 2 TIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWE-----VQTGY 54
Query: 293 KHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK 352
V+T H+ V + + DGT++ S + D+++ VW +V + K
Sbjct: 55 ---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW-------VVATKE------CK 98
Query: 353 GALRGHTKAILCLAVVSNLLFSGSSDNT-IRI----WRRSSSVTDHQKGYSCLAVLEGHR 407
LR H + C++ +S S+ T + W R V H G L+ +
Sbjct: 99 AELREHEHVVECISWAPESSYSSISEATGSEVGHDNWVRG--VLFHSGGKFILSCADDKT 156
Query: 408 RPV------KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
V +C+ + ++ + D T+ V +GS+D +K+W+ R
Sbjct: 157 LRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 205
>TAIR|locus:2173103 [details] [associations]
symbol:AT5G51980 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000571 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50103
PROSITE:PS50294 SMART:SM00320 SMART:SM00356 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB015478 HOGENOM:HOG000239729 ProtClustDB:CLSN2687444
EMBL:AJ252064 EMBL:BX831861 IPI:IPI00541710 IPI:IPI00657147
RefSeq:NP_001032059.1 RefSeq:NP_200011.1 UniGene:At.29648
UniGene:At.9328 ProteinModelPortal:Q9FNZ1 SMR:Q9FNZ1 STRING:Q9FNZ1
PaxDb:Q9FNZ1 PRIDE:Q9FNZ1 EnsemblPlants:AT5G51980.2 GeneID:835273
KEGG:ath:AT5G51980 GeneFarm:3786 TAIR:At5g51980 InParanoid:Q9FJ94
OMA:ATNCFEP PhylomeDB:Q9FNZ1 Genevestigator:Q9FNZ1 Uniprot:Q9FNZ1
Length = 443
Score = 108 (43.1 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 298 QTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRG 357
Q+L V +L + TD +L++G D SIL W + + +L G
Sbjct: 224 QSLSGPVGQVYSLVVGTD--LLFAGTQDGSILAWRYNAATNCFEPS---------ASLTG 272
Query: 358 HTKAILCLAVVSNLLFSGSSDNTIRIWRRSS-----SVTDH 393
HT A++ L V +N L+SGS D TI++W + ++TDH
Sbjct: 273 HTLAVVTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTDH 313
Score = 97 (39.2 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 64 QCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVA 123
+ +A + G + SL + LL+ G+ +G I AW Y N + A++
Sbjct: 219 ETNADQSLSGPVGQVYSLVVGTDLLFAGTQDGSILAWR-----Y-NAATNCFEPSASL-- 270
Query: 124 TGNGDAVKSLVVLGDKLFSAHQDHKIRVWKIDN 156
TG+ AV +L V ++L+S D I+VW +DN
Sbjct: 271 TGHTLAVVTLYVGANRLYSGSMDKTIKVWSLDN 303
Score = 83 (34.3 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 16/67 (23%), Positives = 35/67 (52%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA- 287
S D+T K+W + +C++++ + H + +++ D F+ + S D +K+W +
Sbjct: 291 SMDKTIKVWSLDNLQCIQTLTD-HSSVVMSLICW---DQFLLSCSLDNTVKIWAAIEGGN 346
Query: 288 LQVNKKH 294
L+V H
Sbjct: 347 LEVTYTH 353
Score = 63 (27.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 232 RTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVW 281
R W + L + + H+ ++ I + +D +YTGS D ++VW
Sbjct: 130 RYLHCWSKGESFALLTQLDGHEKLVSGIALPSGSDK-LYTGSKDETLRVW 178
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 129 (50.5 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 46/188 (24%), Positives = 80/188 (42%)
Query: 231 DRTFKIW-RTSD-FRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
DRT +IW R D + C +++ H + + S + ++ + S D +WKK
Sbjct: 37 DRTIRIWGREGDSWECKTVLQDGHQRTVRKVAWSPCGN-YLASASFDATTCIWKKK---- 91
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
N + LE H++ V +A + G +L + + D+S+ +WE D+ N
Sbjct: 92 --NDDFECLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEEN----------E 139
Query: 349 MVLKGALRGHTKAILCLA--VVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
+ HT+ + + LL S S DN + +++ + + C A LEGH
Sbjct: 140 YECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYK------EEDDDWECRATLEGH 193
Query: 407 RRPVKCLT 414
V LT
Sbjct: 194 TSTVWGLT 201
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 60/287 (20%), Positives = 113/287 (39%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYV 196
G L S D IR+W + ++ + + ++A P N + F A +
Sbjct: 28 GTLLASCGGDRTIRIWGREGDSWECKTVLQDGHQRTVRKVAWSPCGNYLASASFDATTCI 87
Query: 197 QVRRHK--KCTWV--HHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRT---SDFRCLESVK 249
+++ +C V H + V S D++ IW +++ C+ SV
Sbjct: 88 WKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEENEYECV-SVV 146
Query: 250 NAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTA 309
N+H + +V + + + + S D + V+K + + TLE H S V
Sbjct: 147 NSHTQDVKHVVWHPTQE-LLASCSYDNNVCVYK------EEDDDWECRATLEGHTSTVWG 199
Query: 310 LALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMV--LKGALRGHTKAILCLAV 367
L G L S + D ++ +W+ Q +G D + V L G G T +
Sbjct: 200 LTFDPSGQRLASCSDDCTVKIWKECQPEGGQEGTDAAWKCVCTLSG-FHGRTVYDIAWCP 258
Query: 368 VSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLA-VLEGHRRPVKCL 413
++ L + D+ +R+++ + Q +S A V + H + V C+
Sbjct: 259 LTGALATACGDDGVRVFKEDETADPDQPAFSLSAHVPKAHTQDVNCI 305
Score = 114 (45.2 bits), Expect = 0.00083, P = 0.00083
Identities = 41/127 (32%), Positives = 59/127 (46%)
Query: 290 VNKKHSLVQTLEKHK-SAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
+N +L+Q H S +A + GT+L S DR+I +W R+ GD
Sbjct: 1 MNDTLALLQKFNAHPDSRCWYVAWNPKGTLLASCGGDRTIRIWGRE-------GDSWECK 53
Query: 349 MVLKGALRGHTKAILCLA--VVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
VL+ GH + + +A N L S S D T IW++ + D + CL VLEGH
Sbjct: 54 TVLQD---GHQRTVRKVAWSPCGNYLASASFDATTCIWKKKND--D----FECLTVLEGH 104
Query: 407 RRPVKCL 413
VKC+
Sbjct: 105 ENEVKCV 111
Score = 44 (20.5 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 397 YSCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQ 448
+ C A LEGH V LT D S + + S S DC +KIW+
Sbjct: 184 WECRATLEGHTSTVWGLTF----DPSGQR---------LASCSDDCTVKIWK 222
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 133 (51.9 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 67/293 (22%), Positives = 118/293 (40%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATL---PTLNDRFTKCFLAN 193
G+ S +D IRVW + NT +ST L + + I + P + F A
Sbjct: 26 GNVFASCGEDKAIRVWSLSGNT---WSTKTILSDGHKRTIREIRWSPCGQYLASASFDAT 82
Query: 194 NYVQVRRHKK--C--TWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTS---DFRCLE 246
+ + + C T H + V S D++ IW + +F C
Sbjct: 83 TAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECA- 141
Query: 247 SVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSA 306
+V NAH + +V + D + + S D IK++ A Q++ TL H S
Sbjct: 142 AVLNAHTQDVKRVVWHPTKD-ILASASYDNTIKMF----AESQLDSDWDCTATLSSHTST 196
Query: 307 VTALALSTDGTVLYSGACDRSILVWER-DQGNYI-VDGDDDSGHMVLKGALRG-HTKAIL 363
V ++ +G L S + D+++ +W GN + D L G H++AI
Sbjct: 197 VWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVWKCVCTLSGQHSRAIY 256
Query: 364 CLA--VVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLE-GHRRPVKCL 413
++ ++ L+ +G D+ IRI++ +S + + L E H + V +
Sbjct: 257 DVSWCKLTGLIATGCGDDGIRIFKETSDSKRDEPTFEQLTAEETAHEQDVNAV 309
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 133 (51.9 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 67/293 (22%), Positives = 118/293 (40%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATL---PTLNDRFTKCFLAN 193
G+ S +D IRVW + NT +ST L + + I + P + F A
Sbjct: 26 GNVFASCGEDKAIRVWSLSGNT---WSTKTILSDGHKRTIREIRWSPCGQYLASASFDAT 82
Query: 194 NYVQVRRHKK--C--TWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTS---DFRCLE 246
+ + + C T H + V S D++ IW + +F C
Sbjct: 83 TAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECA- 141
Query: 247 SVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSA 306
+V NAH + +V + D + + S D IK++ A Q++ TL H S
Sbjct: 142 AVLNAHTQDVKRVVWHPTKD-ILASASYDNTIKMF----AESQLDSDWDCTATLSSHTST 196
Query: 307 VTALALSTDGTVLYSGACDRSILVWER-DQGNYI-VDGDDDSGHMVLKGALRG-HTKAIL 363
V ++ +G L S + D+++ +W GN + D L G H++AI
Sbjct: 197 VWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVWKCVCTLSGQHSRAIY 256
Query: 364 CLA--VVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLE-GHRRPVKCL 413
++ ++ L+ +G D+ IRI++ +S + + L E H + V +
Sbjct: 257 DVSWCKLTGLIATGCGDDGIRIFKETSDSKRDEPTFEQLTAEETAHEQDVNAV 309
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 108 (43.1 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S+DRT KIW T+ L +++ H + + AI + V TGS D K+W +
Sbjct: 111 SYDRTCKIWDTASGEELHTLEG-HRNVVYAIAFNNPYGDKVATGSFDKTCKLW-----SA 164
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYI 339
+ K T H + + LA + T++ +G+ D + +W+ + G +
Sbjct: 165 ETGK---CFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEV 212
Score = 70 (29.7 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 33/107 (30%), Positives = 43/107 (40%)
Query: 343 DDDSGHMVLKGALRGHTKAI--LCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCL 400
D +SG V L GH I LC + L +GS D+T +W S H
Sbjct: 205 DVESGEEV--STLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVH------- 255
Query: 401 AVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIW 447
VL GHR + C+ N D S L+ + SLD K+W
Sbjct: 256 -VLSGHRGEISCVQF---------NWDCS----LIATASLDKSCKVW 288
Score = 67 (28.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 28/100 (28%), Positives = 42/100 (42%)
Query: 344 DDSGHMVLKGALRGHTKAIL--CLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLA 401
D G L L GH +L C L+ + S+D T R++ TD + CL
Sbjct: 289 DAEGGQCL-ATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFS-----TDT---FQCLC 339
Query: 402 VLEGHRRPVK--CLTAVVDSDYSNRNSDHSSTSFLVYSGS 439
LEGH+ + C A S + D +S + V +G+
Sbjct: 340 QLEGHKGEISKVCFNAQ-GSRVLTASVDKTSRVWCVKTGA 378
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 122 (48.0 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 51/182 (28%), Positives = 83/182 (45%)
Query: 231 DRTFKIWRT-SDFRCLESVK-NAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D+ IW T S+ S +AH +N + + ++ + TGSAD + +W LR L
Sbjct: 247 DQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD-LRN-L 304
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDG-TVLYSGACDRSILVWERDQ-GNYIVDGDDDS 346
++ K HS E HK + + S T+L S DR + VW+ + G D +
Sbjct: 305 KL-KLHSF----ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 359
Query: 347 GHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVL 403
G L GHT I + N ++ S S DN ++IW+ + ++ + ++ A L
Sbjct: 360 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAEL 419
Query: 404 EG 405
EG
Sbjct: 420 EG 421
Score = 55 (24.4 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 119 ANVVATGNGDAVKSLV--VLGDKLF-SAHQDHKIRVWKIDNNTSAYYSTS 165
A + TG+ V+ + +L + LF S D K+ +W +NT++ S S
Sbjct: 217 AKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHS 266
Score = 39 (18.8 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 140 LFSAHQDHKIRVWKI 154
L SA DH + +W I
Sbjct: 191 LLSASDDHTVCLWDI 205
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 133 (51.9 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 46/181 (25%), Positives = 79/181 (43%)
Query: 229 SWDRTFKIWRTSD----FRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKL 284
S D T +IW S + C ++ H + + S S + T S D +WK
Sbjct: 46 SGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQ-LLATASFDGTTGIWKNY 104
Query: 285 RAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDD 344
+ + + TLE H++ V +++ + G+ L + + D+S+ +WE +GN +
Sbjct: 105 GSEFEC------ISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGN-----EY 153
Query: 345 DSGHMVLKGALRGHTKAILCLA--VVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAV 402
D L GHT+ + + ++LFS S DNTI++W D Y C+
Sbjct: 154 DCA-----AVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSE----DDDGEYQCVQT 204
Query: 403 L 403
L
Sbjct: 205 L 205
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 141 (54.7 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 61/271 (22%), Positives = 114/271 (42%)
Query: 155 DNNTSAYYSTSGKLKNK---YYERIATLPTLNDRFTKCFLANNYVQVRRHK----KCTWV 207
D+N Y + S +L+ + Y E + + L + +A+N ++ + C +
Sbjct: 313 DHNLLLYEARSLQLQKQFAGYSEEVLDVRFLGPNDSHIIVASNSPCLKVFELQTLACQIL 372
Query: 208 H-HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVK--NAHDDAINAIVVSKS 264
H H D V + D++ +IWR + + V + H ++ I S+
Sbjct: 373 HGHTDIVLALDVFRKGWLFASCAKDQSIRIWRMNKAGQVACVAQGSGHTHSVGTICCSRL 432
Query: 265 NDGFVYTGSADTKIKVWKKLRAALQVNKKHS--LV----QTLEK-HKSAVTALALSTDGT 317
+ F+ TGS D +K+W A N L+ Q+ ++ H + +LA+S +
Sbjct: 433 KESFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQRCHDKDINSLAVSPNDK 492
Query: 318 VLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAI--LCLAVVSNLLFSG 375
+L +G+ DR+ +W Q L G GH + + + + +L +
Sbjct: 493 LLATGSQDRTAKLWALPQCQ-------------LLGVFSGHRRGLWNVQFSPTDQVLATA 539
Query: 376 SSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
S+D TI++W ++ D +SCL EGH
Sbjct: 540 SADGTIKLW----ALQD----FSCLKTFEGH 562
Score = 44 (20.5 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 140 LFSAHQDHKIRVWKIDNNT-----SAYYS 163
LFS+ D IRVW + + + +A+YS
Sbjct: 168 LFSSAVDTSIRVWSLQDRSCLAVLTAHYS 196
Score = 37 (18.1 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 116 GDHANVVATGNGDAVKSL 133
G N++ +GD ++SL
Sbjct: 44 GTKVNILDVASGDLIRSL 61
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 137 (53.3 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 53/195 (27%), Positives = 90/195 (46%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQV 290
D IW S C+ S+ H A+ I + S + V GS +++W L AA
Sbjct: 42 DCRVNIWAVSKPNCIMSL-TGHTSAVGCIQFNSSEERVV-AGSLSGSLRLWD-LEAA--- 95
Query: 291 NKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWE-RDQGNYIVDGDDDSGHM 349
+++TL HK+++++L G L SG+ D +I +W+ R +G
Sbjct: 96 ----KILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKG------------C 139
Query: 350 VLKGALRGHTKAILCLAVVSN--LLFSGSSDNTIRIWR--RSSSVTDHQKGYSCLAVLEG 405
V + +GHT+A+ CLA + L S S D+T+++W +T+ S + V++
Sbjct: 140 VFR--YKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQF 197
Query: 406 HRRPVKCLTAVVDSD 420
H P + L A +D
Sbjct: 198 H--PNEYLLASGSAD 210
Score = 44 (20.5 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 433 FLVYSGSLDCEIKIWQI 449
+L+ SGS D +K+W +
Sbjct: 202 YLLASGSADRTVKLWDL 218
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 133 (51.9 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 47/230 (20%), Positives = 97/230 (42%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQV 290
D T ++W + RC++ ++ H I + ++ + + +GS+D I +W
Sbjct: 90 DLTIRLWNITQQRCIKLLRK-HTYHITTLKFTQKGN-ILISGSSDETITIWDI------T 141
Query: 291 NKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYI--VDGDDDSGH 348
+ ++ TL H V+++AL+ D +++ S + D + +++ + + GH
Sbjct: 142 SNGGKILTTLAAHSDPVSSIALTPDDSIIVSASYDGLMRLFDLQTSQCLKTLTNSTFGGH 201
Query: 349 MVLKGALRGHTKAILCLAVVS---NLLFSGSSDNTIRIWR-RSSSVTDHQKGYSCLAVLE 404
+ + +S + + S D IR+W + V +G + + E
Sbjct: 202 GTATASTNDVINFPIAKVELSPNGQFILNSSLDGKIRLWNYMENKVYKTYQGINGEKICE 261
Query: 405 GHRRPVKCLTAVVDSDY----SNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+K +T V+S+ SN N D + L+ SGS + IW I+
Sbjct: 262 KFNCDIKFITRNVNSNAITITSNNNDDEQYNNVLIVSGSDSTGLLIWDIQ 311
>UNIPROTKB|Q5EA56 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 GO:GO:0000185 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:DAAA02057310 EMBL:DAAA02057311 EMBL:BT020713
IPI:IPI00696466 RefSeq:NP_001019692.1 UniGene:Bt.2084 STRING:Q5EA56
Ensembl:ENSBTAT00000025393 GeneID:511692 KEGG:bta:511692
InParanoid:Q5EA56 NextBio:20870056 Uniprot:Q5EA56
Length = 669
Score = 113 (44.8 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 256 INAIVVSKSNDGFVYTGSADTKIKV---WKKLRAALQVNKKHSLVQTLEKHKSAVTALA- 311
++ I V +++ G VY+ + V ++ L + K V+TL H V ALA
Sbjct: 548 LDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQ-VRTLTGHVGTVYALAV 606
Query: 312 LST-DGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN 370
+ST D T ++S + DRS+ VW D +M+ L H ++ LAV
Sbjct: 607 ISTPDQTKVFSASYDRSLRVWSMD-------------NMICTQTLLRHQGSVTALAVSRG 653
Query: 371 LLFSGSSDNTIRIW 384
LFSG+ D+T+++W
Sbjct: 654 RLFSGAVDSTVKVW 667
Score = 104 (41.7 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 38/133 (28%), Positives = 64/133 (48%)
Query: 203 KC--TWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRT-SDFRCLESVKNAHDDAINAI 259
KC T+V H V S D+T K+W T + ++C ++++ HD + A+
Sbjct: 386 KCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEG-HDGIVLAL 444
Query: 260 VVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVL 319
+ +Y+GSAD I VW +Q +K V T+ H + V L S + +L
Sbjct: 445 CIQGCK---LYSGSADCTIIVWD-----IQNLQK---VNTIRAHDNPVCTLVSSHN--ML 491
Query: 320 YSGACDRSILVWE 332
+SG+ ++I VW+
Sbjct: 492 FSGSL-KAIKVWD 503
Score = 76 (31.8 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 31/103 (30%), Positives = 44/103 (42%)
Query: 312 LSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN- 370
L T G +YS A +V + N I D +S V L GH + LAV+S
Sbjct: 554 LQTSGGSVYSIAVTNHHIVCGTYE-NLIHVWDIESKEQVR--TLTGHVGTVYALAVISTP 610
Query: 371 ---LLFSGSSDNTIRIWRRSSSVTD-----HQKGYSCLAVLEG 405
+FS S D ++R+W + + HQ + LAV G
Sbjct: 611 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRG 653
Score = 69 (29.3 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 63 HQCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAW---NRDPNNYV----NITSTDV 115
++C TL+ G+ + +L I G LY GS++ I W N N + N T V
Sbjct: 428 YKCQKTLE--GHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLV 485
Query: 116 GDHANVVATGNGDAVKSLVVLGDKL 140
H N++ +G+ A+K ++G +L
Sbjct: 486 SSH-NMLFSGSLKAIKVWDIVGTEL 509
Score = 42 (19.8 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 435 VYSGSLDCEIKIW 447
++SG++D +K+W
Sbjct: 655 LFSGAVDSTVKVW 667
>UNIPROTKB|E2QXW8 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849
GO:GO:0000185 CTD:84231 KO:K10646 OMA:ALCIQGN EMBL:AAEX03004625
RefSeq:XP_852015.1 ProteinModelPortal:E2QXW8
Ensembl:ENSCAFT00000030876 GeneID:609824 KEGG:cfa:609824
NextBio:20895405 Uniprot:E2QXW8
Length = 670
Score = 113 (44.8 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 256 INAIVVSKSNDGFVYTGSADTKIKV---WKKLRAALQVNKKHSLVQTLEKHKSAVTALA- 311
++ I V +++ G VY+ + V ++ L + K V+TL H V ALA
Sbjct: 549 LDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQ-VRTLTGHVGTVYALAV 607
Query: 312 LST-DGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN 370
+ST D T ++S + DRS+ VW D +M+ L H ++ LAV
Sbjct: 608 ISTPDQTKVFSASYDRSLRVWSMD-------------NMICTQTLLRHQGSVTALAVSRG 654
Query: 371 LLFSGSSDNTIRIW 384
LFSG+ D+T+++W
Sbjct: 655 RLFSGAVDSTVKVW 668
Score = 104 (41.7 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 38/133 (28%), Positives = 64/133 (48%)
Query: 203 KC--TWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRT-SDFRCLESVKNAHDDAINAI 259
KC T+V H V S D+T K+W T + ++C ++++ HD + A+
Sbjct: 387 KCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEG-HDGIVLAL 445
Query: 260 VVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVL 319
+ +Y+GSAD I VW +Q +K V T+ H + V L S + +L
Sbjct: 446 CIQGCK---LYSGSADCTIIVWD-----IQNLQK---VNTIRAHDNPVCTLVSSHN--ML 492
Query: 320 YSGACDRSILVWE 332
+SG+ ++I VW+
Sbjct: 493 FSGSL-KAIKVWD 504
Score = 76 (31.8 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 31/103 (30%), Positives = 44/103 (42%)
Query: 312 LSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN- 370
L T G +YS A +V + N I D +S V L GH + LAV+S
Sbjct: 555 LQTSGGSVYSIAVTNHHIVCGTYE-NLIHVWDIESKEQVR--TLTGHVGTVYALAVISTP 611
Query: 371 ---LLFSGSSDNTIRIWRRSSSVTD-----HQKGYSCLAVLEG 405
+FS S D ++R+W + + HQ + LAV G
Sbjct: 612 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRG 654
Score = 69 (29.3 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 63 HQCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAW---NRDPNNYV----NITSTDV 115
++C TL+ G+ + +L I G LY GS++ I W N N + N T V
Sbjct: 429 YKCQKTLE--GHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLV 486
Query: 116 GDHANVVATGNGDAVKSLVVLGDKL 140
H N++ +G+ A+K ++G +L
Sbjct: 487 SSH-NMLFSGSLKAIKVWDIVGTEL 510
Score = 42 (19.8 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 435 VYSGSLDCEIKIW 447
++SG++D +K+W
Sbjct: 656 LFSGAVDSTVKVW 668
>UNIPROTKB|F1RFA9 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231 KO:K10646
OMA:ALCIQGN EMBL:FP102350 RefSeq:XP_003124781.1 UniGene:Ssc.21218
Ensembl:ENSSSCT00000008814 GeneID:100516964 KEGG:ssc:100516964
Uniprot:F1RFA9
Length = 670
Score = 113 (44.8 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 256 INAIVVSKSNDGFVYTGSADTKIKV---WKKLRAALQVNKKHSLVQTLEKHKSAVTALA- 311
++ I V +++ G VY+ + V ++ L + K V+TL H V ALA
Sbjct: 549 LDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQ-VRTLTGHVGTVYALAV 607
Query: 312 LST-DGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN 370
+ST D T ++S + DRS+ VW D +M+ L H ++ LAV
Sbjct: 608 ISTPDQTKVFSASYDRSLRVWSMD-------------NMICTQTLLRHQGSVTALAVSRG 654
Query: 371 LLFSGSSDNTIRIW 384
LFSG+ D+T+++W
Sbjct: 655 RLFSGAVDSTVKVW 668
Score = 104 (41.7 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 38/133 (28%), Positives = 64/133 (48%)
Query: 203 KC--TWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRT-SDFRCLESVKNAHDDAINAI 259
KC T+V H V S D+T K+W T + ++C ++++ HD + A+
Sbjct: 387 KCKGTFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQKTLEG-HDGIVLAL 445
Query: 260 VVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVL 319
+ +Y+GSAD I VW +Q +K V T+ H + V L S + +L
Sbjct: 446 CIQGCR---LYSGSADCTIIVWD-----IQNLQK---VNTIRAHDNPVCTLVSSHN--LL 492
Query: 320 YSGACDRSILVWE 332
+SG+ ++I VW+
Sbjct: 493 FSGSL-KAIKVWD 504
Score = 76 (31.8 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 31/103 (30%), Positives = 44/103 (42%)
Query: 312 LSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN- 370
L T G +YS A +V + N I D +S V L GH + LAV+S
Sbjct: 555 LQTSGGSVYSIAVTNHHIVCGTYE-NLIHVWDIESKEQVR--TLTGHVGTVYALAVISTP 611
Query: 371 ---LLFSGSSDNTIRIWRRSSSVTD-----HQKGYSCLAVLEG 405
+FS S D ++R+W + + HQ + LAV G
Sbjct: 612 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRG 654
Score = 69 (29.3 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 63 HQCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAW---NRDPNNYV----NITSTDV 115
++C TL+ G+ + +L I G LY GS++ I W N N + N T V
Sbjct: 429 YKCQKTLE--GHDGIVLALCIQGCRLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLV 486
Query: 116 GDHANVVATGNGDAVKSLVVLGDKL 140
H N++ +G+ A+K ++G +L
Sbjct: 487 SSH-NLLFSGSLKAIKVWDIVGTEL 510
Score = 42 (19.8 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 435 VYSGSLDCEIKIW 447
++SG++D +K+W
Sbjct: 656 LFSGAVDSTVKVW 668
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 111 (44.1 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 37/117 (31%), Positives = 52/117 (44%)
Query: 268 FVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRS 327
FV +GS DT IK+W V +K + + + H AV L S DG L S A D +
Sbjct: 119 FVASGSLDTDIKLW-------DVRRKGCIFK-YKSHTQAVRCLRFSPDGKWLASAADDHT 170
Query: 328 ILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
+ +W+ G + + +GH + H + LL SGSS TIR W
Sbjct: 171 VKLWDLTAGKVMFEF---TGHYGPVNVVEFHPS-------IEYLLASGSSSMTIRFW 217
Score = 71 (30.1 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 61 SEHQCSATLKVKGNSSYIPSLAIAGK--LLYGGSSNGEIRAWNRDP--------NNYVNI 110
S ++ + + + G+++ I SL I+ K L+ GS +G IR W+ + + NI
Sbjct: 49 SVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANI 108
Query: 111 TSTDVGDHANVVATGNGD 128
S D + + VA+G+ D
Sbjct: 109 CSLDFHPYGSFVASGSLD 126
Score = 61 (26.5 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 22/90 (24%), Positives = 40/90 (44%)
Query: 70 KVKGNSSYIPSLAIA---GKLLYGGSSNGEIRAWN-RDPNNYVNITSTDVGDHANVVATG 125
++ +SS + SL + G+LL G + + W+ PN +++T H + +
Sbjct: 15 EIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTG-----HTTPIESL 69
Query: 126 NGDAVKSLVVLGDKLFSAHQDHKIRVWKID 155
A + L+V G Q IRVW ++
Sbjct: 70 QISAKEELIVAGS------QSGSIRVWDLE 93
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 136 (52.9 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 45/158 (28%), Positives = 74/158 (46%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S DRT ++W T+ L + H N + N ++ TGS D ++W+ +
Sbjct: 740 SHDRTARLWTTNHISPLR-IFTGHLSDCNTVRFHP-NINYLATGSNDKSARLWE-----I 792
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
Q K V+ H++ + +A S DG +L + D S+++W D +G
Sbjct: 793 QTGK---CVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILW-----------DLSTGK 838
Query: 349 MVLKGALRGHTKAILCL--AVVSNLLFSGSSDNTIRIW 384
V K + GHTK + L + ++L SGSSD T+R+W
Sbjct: 839 KVKK--MDGHTKCVYSLDFSCDGSILASGSSDCTVRLW 874
Score = 48 (22.0 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 105 NNYVNITSTDVGDHANVVATGNGDA-VK--SLVVLGDKLFSAHQDHKIRVWKIDN-NTSA 160
N Y + +TD+ A +VA G D+ VK +L + ++ Q + + + N N +
Sbjct: 556 NTYQGLNTTDISKDAQLVAGGFSDSSVKIWNLKEMKEQRLQQQQQQQQQQQQQQNSNQNG 615
Query: 161 YY 162
Y+
Sbjct: 616 YF 617
>UNIPROTKB|F1NEH1 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000185 "activation of
MAPKKK activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Pfam:PF00097
Prosite:PS00518 GO:GO:0043231 GO:GO:0005886 GO:GO:0006915
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 GO:GO:0000185
OMA:ALCIQGN EMBL:AADN02023658 EMBL:AADN02023655 EMBL:AADN02023656
EMBL:AADN02023657 IPI:IPI00600547 Ensembl:ENSGALT00000009263
ArrayExpress:F1NEH1 Uniprot:F1NEH1
Length = 670
Score = 110 (43.8 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 32/90 (35%), Positives = 47/90 (52%)
Query: 297 VQTLEKHKSAVTALA-LST-DGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGA 354
V+TL H V ALA +ST D T ++S + DRS+ VW D +M+
Sbjct: 592 VRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMD-------------NMICTQT 638
Query: 355 LRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
L H ++ LAV LFSG+ D+T+++W
Sbjct: 639 LLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 106 (42.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 38/133 (28%), Positives = 65/133 (48%)
Query: 203 KC--TWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRT-SDFRCLESVKNAHDDAINAI 259
KC T+V H V S D+T K+W T + ++C ++++ HD + A+
Sbjct: 387 KCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTLEG-HDGIVLAL 445
Query: 260 VVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVL 319
+ + +Y+GSAD I VW +Q +K V T+ H + V L S + +L
Sbjct: 446 CIQGNK---LYSGSADCTIIVWD-----IQNLQK---VNTIRAHDNPVCTLVSSHN--ML 492
Query: 320 YSGACDRSILVWE 332
+SG+ ++I VW+
Sbjct: 493 FSGSL-KAIKVWD 504
Score = 105 (42.0 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 40/165 (24%), Positives = 68/165 (41%)
Query: 124 TGNGDAVKSLVVLGDKLFSAHQDHKIRVWKIDNNTSAYY-STSGKLKNKYYERIATLPTL 182
TG V++LV + L+S I++W I N + TSG Y T
Sbjct: 517 TGLNHWVRALVASQNYLYSGSYQ-TIKIWDIRNLECVHVLQTSG---GSVYSIAVT---- 568
Query: 183 NDRFTKCFLANNYVQV----RRHKKCTWVHHVDTVXXXXXXXX--XXXXXXTSWDRTFKI 236
N C N + V + + T HV TV S+DR+ ++
Sbjct: 569 NHHIV-CGTYENLIHVWDIETKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRV 627
Query: 237 WRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVW 281
W + C +++ H ++ A+ VS+ G +++G+ D+ +KVW
Sbjct: 628 WSMDNMICTQTLLR-HQGSVTALAVSR---GRLFSGAVDSTVKVW 668
Score = 73 (30.8 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 30/103 (29%), Positives = 44/103 (42%)
Query: 312 LSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN- 370
L T G +YS A +V + N I D ++ V L GH + LAV+S
Sbjct: 555 LQTSGGSVYSIAVTNHHIVCGTYE-NLIHVWDIETKEQVR--TLTGHVGTVYALAVISTP 611
Query: 371 ---LLFSGSSDNTIRIWRRSSSVTD-----HQKGYSCLAVLEG 405
+FS S D ++R+W + + HQ + LAV G
Sbjct: 612 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRG 654
Score = 72 (30.4 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 63 HQCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAW---NRDPNNYV----NITSTDV 115
++C TL+ G+ + +L I G LY GS++ I W N N + N T V
Sbjct: 429 YKCQKTLE--GHDGIVLALCIQGNKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLV 486
Query: 116 GDHANVVATGNGDAVKSLVVLGDKL 140
H N++ +G+ A+K ++G +L
Sbjct: 487 SSH-NMLFSGSLKAIKVWDIVGTEL 510
Score = 42 (19.8 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 435 VYSGSLDCEIKIW 447
++SG++D +K+W
Sbjct: 656 LFSGAVDSTVKVW 668
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 127 (49.8 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 38/114 (33%), Positives = 56/114 (49%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAI-VVSKSNDGFVYTGSADTKIKVWKKLRAA 287
S DR KIW C +S+ AHDD++ + V KS+ +T D KIK W
Sbjct: 610 SADRNVKIWGLDFGDCHKSLF-AHDDSVMYLQFVPKSH--LFFTAGKDHKIKQWDA---- 662
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
K +QTLE H + LA+S G + S + D+S+ +WER + I++
Sbjct: 663 ----DKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWERTREPLILE 712
Score = 57 (25.1 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 108 VNITSTDVGDHANVVATGNGDAVKSLVV--LGDKLFSAHQDHKIRVWKIDNNTSAY 161
+ I S G+ NV G+ A+ +L LG +L S +D I VW + N + Y
Sbjct: 89 IRIFSLLSGE-GNVTFNGHKAAITTLKYDQLGGRLASGSKDTDIIVWDVINESGLY 143
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 126 (49.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 38/114 (33%), Positives = 55/114 (48%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAI-VVSKSNDGFVYTGSADTKIKVWKKLRAA 287
S DR KIW C S+ AHDD++ + V KS+ +T D KIK W
Sbjct: 609 SADRNVKIWGLDFGDCHRSLF-AHDDSVMYLRFVPKSH--LFFTAGKDHKIKQWDA---- 661
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
K +QTLE H + LA+S G + S + D+S+ +WER + I++
Sbjct: 662 ----DKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWERTREPLILE 711
Score = 58 (25.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 108 VNITSTDVGDHANVVATGNGDAVKSLVV--LGDKLFSAHQDHKIRVWKIDNNTSAY 161
+ I S G+ N+ G+ AV SL LG +L S +D + +W + N + Y
Sbjct: 89 IRIFSLLSGE-GNITFNGHKAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLY 143
>ASPGD|ASPL0000060163 [details] [associations]
symbol:AN1385 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0002098 "tRNA wobble uridine modification"
evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000208901 EMBL:AACD01000019 RefSeq:XP_658989.1
ProteinModelPortal:Q5BDJ5 STRING:Q5BDJ5 GeneID:2877158
KEGG:ani:AN1385.2 OMA:TAIWENI OrthoDB:EOG4CVKH5 Uniprot:Q5BDJ5
Length = 446
Score = 106 (42.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 34/109 (31%), Positives = 58/109 (53%)
Query: 300 LEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHT 359
L+ H S V +++ S G +L + + D+SI +WE D + DGD++ + + ++ H
Sbjct: 142 LDGHDSEVKSVSWSASGMLLATCSRDKSIWIWE-D----LEDGDNNFETVAV---MQEHE 193
Query: 360 KAILCLA--VVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
+ C+A L SGS D+TIRIWR + D + +A ++GH
Sbjct: 194 GDVKCVAWHPAEECLASGSYDDTIRIWRED--IDD----WGQVACIKGH 236
Score = 71 (30.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIV--VSKSNDGFVYTGSADTKIKVWKK 283
S D+T +++ +FR L ++ H +I + S + + TGS D + +W++
Sbjct: 46 SSDKTVRVYSLVNFRLLSTISGGHKRSIRTCAWKPNVSGESVLATGSFDATVGIWRR 102
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 109 (43.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 54/204 (26%), Positives = 88/204 (43%)
Query: 243 RCLESVKNAHDDAINAIVVSKSNDGF-VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLE 301
RC +++ H +A+ + VS S DG + +GS DT +++W + + L T +
Sbjct: 100 RCSQTIAG-HAEAV--LCVSFSPDGKQLASGSGDTTVRLW-------DLYTETPLF-TCK 148
Query: 302 KHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKA 361
HK+ V +A S DG L SG+ I W +G ++G +GH K + G +
Sbjct: 149 GHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGE--LEGSPLTGH---KKWITGISWE 203
Query: 362 ILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAVVDSDY 421
+ L+ + S D RIW +T +K CL+ GH V C+ D
Sbjct: 204 PVHLSSPCRRFVTSSKDGDARIW----DIT-LKKSIICLS---GHTLAVTCVKWGGDGII 255
Query: 422 SNRNSDHSSTSFLVYSGSLDCEIK 445
+ D + + G L E+K
Sbjct: 256 YTGSQDCTIKMWETTQGKLIRELK 279
Score = 94 (38.1 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 30/100 (30%), Positives = 47/100 (47%)
Query: 228 TSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
+S D +IW D +S+ + V DG +YTGS D IK+W+ +
Sbjct: 217 SSKDGDARIW---DITLKKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQG- 272
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRS 327
L++ L+ H + +LALST+ VL +GA D +
Sbjct: 273 -------KLIRELKGHGHWINSLALSTE-YVLRTGAFDHT 304
Score = 59 (25.8 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 72 KGNSSYIPSLAIA--GKLLYGGSSNGEIRAWN 101
KG+ +++ ++A + GK L GS +GEI WN
Sbjct: 148 KGHKNWVLTVAWSPDGKHLVSGSKSGEICCWN 179
Score = 58 (25.5 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
S+ S L+ SGS D +KIW+IR
Sbjct: 411 SADSRLLLSGSKDSTLKIWEIR 432
Score = 49 (22.3 bits), Expect = 9.6e-05, Sum P(4) = 9.6e-05
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 63 HQCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAWN 101
++CS T+ + S + GK L GS + +R W+
Sbjct: 99 NRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWD 137
Score = 40 (19.1 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 372 LFSGSSDNTIRIWRRSSS 389
L SGS D T+ +W S S
Sbjct: 332 LVSGSDDFTMFLWEPSVS 349
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 120 (47.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 239 TSDFRCLESVKNAHDDAINAIVVSKSN-DGF--VYTGSADTKIKVWKKLRAALQVNKKHS 295
T+ + L + AHDDAI ++ K+ DG V +GS D +KVWK ++K
Sbjct: 2 TTQYGILFKQEQAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWK------WNDEKLD 55
Query: 296 LVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYI 339
L TLE H+ V ++ +S G++ S + D I +W+ + G I
Sbjct: 56 LQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQI 99
Score = 50 (22.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 24/70 (34%), Positives = 30/70 (42%)
Query: 360 KAILCLAVVSN--LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAVV 417
K IL +A + L SG+ D I I+ D G L LEGH P++ LT
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIF-------DIATG-KLLHTLEGHAMPIRSLTFSP 200
Query: 418 DSDYSNRNSD 427
DS SD
Sbjct: 201 DSQLLVTASD 210
>TAIR|locus:2082891 [details] [associations]
symbol:RID3 "AT3G49180" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AL132956 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0080008 UniGene:At.46259 UniGene:At.48755
UniGene:At.72728 EMBL:BT004624 EMBL:AK227986 IPI:IPI00544514
PIR:T45823 RefSeq:NP_190487.1 ProteinModelPortal:Q9M3B4 SMR:Q9M3B4
IntAct:Q9M3B4 STRING:Q9M3B4 PRIDE:Q9M3B4 DNASU:824079
EnsemblPlants:AT3G49180.1 GeneID:824079 KEGG:ath:AT3G49180
TAIR:At3g49180 InParanoid:Q9M3B4 OMA:SEDRTCK PhylomeDB:Q9M3B4
ProtClustDB:CLSN2684231 Genevestigator:Q9M3B4 Uniprot:Q9M3B4
Length = 438
Score = 124 (48.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 54/185 (29%), Positives = 79/185 (42%)
Query: 250 NAHDDAINAIVVSKSN-DGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVT 308
N H ++ IV+ + + + S D KVW R L N ++ S +
Sbjct: 170 NEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKN----II-----FPSVIN 220
Query: 309 ALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVV 368
ALAL G V Y+GA D I + G ++ + G VL G++ KAI CLA
Sbjct: 221 ALALDPGGCVFYAGARDSKIYI-----G--AINATSEYGTQVL-GSVSEKGKAITCLAYC 272
Query: 369 S--NLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRR-PVKCLTAVVDSDYSNRN 425
+ NLL SGS D + +W S H + L +G R+ PV + V + +N N
Sbjct: 273 ADGNLLISGSEDGVVCVWDPKS--LRHVR---TLIHAKGSRKGPVNNIQIVRKTIVANSN 327
Query: 426 SDHSS 430
S
Sbjct: 328 KTQVS 332
Score = 112 (44.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 228 TSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
+S DRT K+W S + L+++ INA+ + F Y G+ D+KI + + A
Sbjct: 193 SSEDRTCKVWSLSRGKLLKNI--IFPSVINALALDPGGCVF-YAGARDSKIYIGA-INAT 248
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWE 332
+ + L EK K A+T LA DG +L SG+ D + VW+
Sbjct: 249 SEYGTQ-VLGSVSEKGK-AITCLAYCADGNLLISGSEDGVVCVWD 291
Score = 51 (23.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 125 GNGDAVKSLVVLGDK--LFSAHQDHKIRVWKI 154
G+ +V LV GD L S QD IRVW +
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 137 (53.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 72/318 (22%), Positives = 130/318 (40%)
Query: 155 DNNTSAYYSTSGKLKNK---YYERIATLPTLNDRFTKCFLANNYVQVRRHK----KCTWV 207
D+N Y + S +L+ + Y E + + L + +A+N ++ + C +
Sbjct: 313 DHNLLLYEAHSLQLQKQFAGYSEEVLDVRFLGPSDSHIVVASNSPCLKVFELQTLACQIL 372
Query: 208 H-HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVK--NAHDDAINAIVVSKS 264
H H D V + D++ +IW+ + + V + H ++ I S+
Sbjct: 373 HGHTDIVLALDVFRKGWLFASCAKDQSIRIWKMNKAGQVACVAQGSGHTHSVGTICCSRL 432
Query: 265 NDGFVYTGSADTKIKVWKKLRAALQVNKKHS----LVQ---TLEKHKSAVTALALSTDGT 317
+ F+ TGS D +K+W A L + L+Q T H + +LA+S +
Sbjct: 433 KESFLVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRCHDKDINSLAVSPNDK 492
Query: 318 VLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAI--LCLAVVSNLLFSG 375
+L +G+ DR+ +W Q L G GH + + + + +L +
Sbjct: 493 LLATGSQDRTAKLWALPQCQ-------------LLGVFTGHRRGLWNVQFSPTDQVLATA 539
Query: 376 SSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAVV-DSDYSNRNSDHSSTSFL 434
S+D TI++W ++ D +SCL EGH V + V S + SD +
Sbjct: 540 SADGTIKLW----ALQD----FSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWT 591
Query: 435 VYSG----SLDC-EIKIW 447
+ S +LD E K+W
Sbjct: 592 IKSNECVRTLDAHEDKVW 609
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 140 LFSAHQDHKIRVWKIDNNT-----SAYYS 163
LFS+ D IRVW + + + +A+YS
Sbjct: 168 LFSSAVDTSIRVWSLQDRSCLAVLTAHYS 196
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 118 (46.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 32/104 (30%), Positives = 54/104 (51%)
Query: 239 TSDFRCLESVKNAHDDAINAIVVSK-SNDG--FVYTGSADTKIKVWKKLRAALQVNKKHS 295
++ + L ++AH+DAI ++ K SNDG V +GS D +KVWK L++
Sbjct: 2 STQYSILFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQ---- 57
Query: 296 LVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYI 339
LE H+ V ++ +S G ++ S + D I +W+ + G I
Sbjct: 58 --WALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQI 99
Score = 52 (23.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 24/70 (34%), Positives = 30/70 (42%)
Query: 360 KAILCLAVVSN--LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAVV 417
K IL +A + L SG+ D I I+ D G L LEGH P++ LT
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIF-------DIATG-KLLHTLEGHAMPIRSLTFST 200
Query: 418 DSDYSNRNSD 427
DS SD
Sbjct: 201 DSQLLVTASD 210
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 126 (49.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 38/114 (33%), Positives = 55/114 (48%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAI-VVSKSNDGFVYTGSADTKIKVWKKLRAA 287
S DR KIW C S+ AHDD++ + V KS+ +T D KIK W
Sbjct: 609 SADRNVKIWGLDFGDCHRSLF-AHDDSVMHLRFVPKSH--LFFTAGKDHKIKQWDA---- 661
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVD 341
K +QTLE H + LA+S G + S + D+S+ +WER + I++
Sbjct: 662 ----DKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWERTREPLILE 711
Score = 57 (25.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 120 NVVATGNGDAVKSLVV--LGDKLFSAHQDHKIRVWKIDNNTSAY 161
N+ G+ AV SL LG +L S +D + +W + N + Y
Sbjct: 100 NITFNGHRAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLY 143
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 111 (44.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 34/143 (23%), Positives = 62/143 (43%)
Query: 206 WVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKN-AHDDAINAIVVS-K 263
+V H V S D+T K+W T C +V++ +H + ++ + S
Sbjct: 60 FVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-CKYTVQDESHSEWVSCVRFSPN 118
Query: 264 SNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGA 323
S++ + + D +KVW L+ N H H + + +S DG++ SG
Sbjct: 119 SSNPIIVSCGWDKLVKVWNLANCKLKTN--HI------GHTGYLNTVTVSPDGSLCASGG 170
Query: 324 CDRSILVWERDQGN--YIVDGDD 344
D ++W+ ++G Y +DG D
Sbjct: 171 KDGQAMLWDLNEGKHLYTLDGGD 193
Score = 49 (22.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 9/33 (27%), Positives = 20/33 (60%)
Query: 71 VKGNSSYIPSLAIA--GKLLYGGSSNGEIRAWN 101
++G+S ++ + I+ G+ GS +G +R W+
Sbjct: 18 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 50
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 49/180 (27%), Positives = 81/180 (45%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQV 290
DR KIW + + L+ H ++I I +SK N ++++ D ++K W L+
Sbjct: 307 DRLIKIWDLASCK-LKLTLTGHINSIRDIKISKKNP-YLFSCGEDNRVKCWD-----LEY 359
Query: 291 NKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWE-RDQGNYIVDGDDDSGHM 349
NK +++ H S V L+L +L SG D + VW+ R + + V
Sbjct: 360 NK---VIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFV--------- 407
Query: 350 VLKGALRGHTKAIL--CLAVVSNLLFSGSSDNTIRIWRRSS-----SVTDHQKGYSCLAV 402
L GHT ++ C V + SGS D IR+W ++ S+T H+K L++
Sbjct: 408 -----LSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSI 462
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 49/180 (27%), Positives = 81/180 (45%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQV 290
DR KIW + + L+ H ++I I +SK N ++++ D ++K W L+
Sbjct: 307 DRLIKIWDLASCK-LKLTLTGHINSIRDIKISKKNP-YLFSCGEDNRVKCWD-----LEY 359
Query: 291 NKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWE-RDQGNYIVDGDDDSGHM 349
NK +++ H S V L+L +L SG D + VW+ R + + V
Sbjct: 360 NK---VIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFV--------- 407
Query: 350 VLKGALRGHTKAIL--CLAVVSNLLFSGSSDNTIRIWRRSS-----SVTDHQKGYSCLAV 402
L GHT ++ C V + SGS D IR+W ++ S+T H+K L++
Sbjct: 408 -----LSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSI 462
>UNIPROTKB|G4MZP1 [details] [associations]
symbol:MGG_07030 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K14793 RefSeq:XP_003715212.1 ProteinModelPortal:G4MZP1
EnsemblFungi:MGG_07030T0 GeneID:2683044 KEGG:mgr:MGG_07030
Uniprot:G4MZP1
Length = 609
Score = 114 (45.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 45/137 (32%), Positives = 63/137 (45%)
Query: 250 NAHDDAINAIVVSKSNDG-FVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVT 308
+ H AI + V+ S DG +V T AD +I V Q K V+ L H+ AVT
Sbjct: 243 HGHTGAI--LAVAASQDGKWVVTAGADKRIVVHDA-----QTLKP---VRALTHHRDAVT 292
Query: 309 ALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVV 368
+LA LYSG+ DR++ VW D YI + GH + H I LA
Sbjct: 293 SLAFQRGTNQLYSGSRDRTVKVWNIDNLAYI---ETLFGH-------QDHVVDIDALAQ- 341
Query: 369 SNLLFSGSSDNTIRIWR 385
+ +G+ D T R+W+
Sbjct: 342 ERCVSAGARDRTARLWK 358
Score = 65 (27.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 25/67 (37%), Positives = 30/67 (44%)
Query: 369 SNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAVVDSDYSNR---- 424
S+L+ SGS D +RIWR S D +K VL G T+ D D SN
Sbjct: 473 SDLILSGSWDGCVRIWRLS----DDKKKLEAAGVL-GEPLEQSQDTSASDKDKSNGKAIT 527
Query: 425 --NSDHS 429
NS HS
Sbjct: 528 NGNSSHS 534
>FB|FBgn0033526 [details] [associations]
symbol:Caf1-105 "Caf1-105" species:7227 "Drosophila
melanogaster" [GO:0006333 "chromatin assembly or disassembly"
evidence=ISS] [GO:0006334 "nucleosome assembly" evidence=NAS]
[GO:0003677 "DNA binding" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677
eggNOG:COG2319 GeneTree:ENSGT00550000074968 KO:K10751
RefSeq:NP_610589.2 UniGene:Dm.4362 ProteinModelPortal:A1Z898
SMR:A1Z898 STRING:A1Z898 PaxDb:A1Z898 PRIDE:A1Z898
EnsemblMetazoa:FBtr0088310 GeneID:36107 KEGG:dme:Dmel_CG12892
UCSC:CG12892-RA CTD:36107 FlyBase:FBgn0033526 InParanoid:A1Z898
OMA:PIAFRRK OrthoDB:EOG476HFQ PhylomeDB:A1Z898 GenomeRNAi:36107
NextBio:796901 Bgee:A1Z898 Uniprot:A1Z898
Length = 747
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 44/141 (31%), Positives = 66/141 (46%)
Query: 271 TGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILV 330
+G +D + +W R+ L L +H+ AV A+ S +G +L SG + + +
Sbjct: 38 SGGSDAHVLIWYVNRSDDAEGVDVELAADLSRHQRAVNAVRWSPNGELLASGDDESVVFI 97
Query: 331 WERDQGNY---IVDGD-----DDSGHMVLKGALRGHTKAI--LCLAVVSNLLFSGSSDNT 380
W++ + IVD D D + LK LRGH + I L A S L SGS DNT
Sbjct: 98 WKQKADHEVVNIVDADGCSEQDKEVWLTLK-VLRGHREDIYDLSWAPNSQFLVSGSVDNT 156
Query: 381 IRIWR----RSSSVTDHQKGY 397
+W +S ++ D KGY
Sbjct: 157 AMLWDVHSGKSLAILDDHKGY 177
>UNIPROTKB|F1NIY8 [details] [associations]
symbol:F1NIY8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00550000075093 OMA:AAKDCTI EMBL:AADN02052957
EMBL:AADN02052958 IPI:IPI00601574 ProteinModelPortal:F1NIY8
Ensembl:ENSGALT00000002170 Uniprot:F1NIY8
Length = 364
Score = 128 (50.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 36/118 (30%), Positives = 59/118 (50%)
Query: 297 VQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNY--IVDGDDDSGHMVLKGA 354
++ L H+ +VT L +S D ++S A D S++ WE + G +V G G +G
Sbjct: 82 IRVLRGHQHSVTCLVVSPDDKFIFSAAKDGSVIKWEVESGKKLCVVPG----GKKSTEGQ 137
Query: 355 LRGHTKAILCLAVVSN--LLFSGSSDNTIRIW-----RRSSSVTDHQKGYSCLAVLEG 405
GHT +LC+A+ S+ L +G + I IW +R + T H+ S L+ +G
Sbjct: 138 PMGHTAHVLCIAISSDGKYLATGDRNKLILIWEAATCKRLYTFTGHRDAVSGLSFRKG 195
Score = 43 (20.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 432 SFLVYSGSLDCEIKIWQI 449
++ +YS S D +K+W +
Sbjct: 196 TYQLYSASHDRSVKVWNV 213
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 117 (46.2 bits), Expect = 0.00081, P = 0.00081
Identities = 45/163 (27%), Positives = 72/163 (44%)
Query: 252 HDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALA 311
H + I S ++ + TGS D ++W A KH TL+ H V ++
Sbjct: 151 HGEPILCAQFSPASSARLATGSGDNTARIWD----AETGTPKH----TLKGHAGWVLGVS 202
Query: 312 LSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCL-AVVSN 370
S DGT L + + D+++ +W+ + G + G + GH ++G L L +
Sbjct: 203 WSPDGTRLATCSMDKTVRIWDPETGKQV--GSELKGHAKW---VQGIAWEPLHLWRDGTP 257
Query: 371 LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCL 413
L S S D T RIW ++ T+H VL GH+ V C+
Sbjct: 258 RLVSASKDFTARIWTVNTGRTEH--------VLSGHKGSVSCV 292
Score = 96 (38.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 30/88 (34%), Positives = 42/88 (47%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSND-GFVYTGSADTKIKVWKKLRAA 287
S D T +IW + R E V + H +++ + N G VYT S D +KVW +
Sbjct: 263 SKDFTARIWTVNTGRT-EHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAV--- 318
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTD 315
K +L+ L+ H V LALSTD
Sbjct: 319 -----KGTLLHDLKSHAHWVNHLALSTD 341
Score = 82 (33.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/94 (26%), Positives = 39/94 (41%)
Query: 303 HKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAI 362
H+ V + S DG+++ S D + +W G +I LRGH +
Sbjct: 412 HQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFI-------------NTLRGHVAPV 458
Query: 363 L-C-LAVVSNLLFSGSSDNTIRIW--RRSSSVTD 392
C + S LL + S D T+++W R TD
Sbjct: 459 YQCSFSADSRLLVTASKDTTLKVWNVRTGKLATD 492
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 37/106 (34%), Positives = 55/106 (51%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S DRT KIW + D R L ++K AHD I +K ND V TGS D I++W +
Sbjct: 167 SGDRTLKIWDSRDNRSLNTIK-AHDHEILTCDWNKYNDKEVVTGSVDKTIRIWD-----I 220
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDG-TVLYSGACDRSILVWER 333
+ + + + L H AV + S ++L S + D S++VW+R
Sbjct: 221 RYPDRPTTI--LRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDR 264
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 116 (45.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 45/172 (26%), Positives = 78/172 (45%)
Query: 231 DRTFKIWRTSDFRCLES--VKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D+ IW T + + +AH +N + + ++ + TGSAD + +W LR L
Sbjct: 253 DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD-LRN-L 310
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDG-TVLYSGACDRSILVWERDQ-GNYIVDGDDDS 346
++ K HS E HK + + S T+L S DR + VW+ + G D +
Sbjct: 311 KL-KLHSF----ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 365
Query: 347 GHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDNTIRIWRRSSSVTDHQK 395
G L GHT I + N ++ S S DN +++W+ + +V + ++
Sbjct: 366 GPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEE 417
Score = 58 (25.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 31/108 (28%), Positives = 51/108 (47%)
Query: 64 QCSATLKVKGNS------SYIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTD--V 115
+C L+++G+ S+ P+L G LL S + I W+ +N T + V
Sbjct: 170 ECQPDLRLRGHQKEGYGLSWNPNLN--GYLL-SASDDHTICLWD------INATPKEHRV 220
Query: 116 GDHANVVATGNGDAVKSLV--VLGDKLF-SAHQDHKIRVWKI-DNNTS 159
D N+ TG+ V+ + +L + LF S D K+ +W +NNTS
Sbjct: 221 IDAKNIF-TGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS 267
>WB|WBGene00010631 [details] [associations]
symbol:cash-1 species:6239 "Caenorhabditis elegans"
[GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0002009 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0040035 EMBL:Z71181 InterPro:IPR013258 Pfam:PF08232
GeneTree:ENSGT00520000055597 EMBL:Z71177 PIR:T18598
RefSeq:NP_505664.2 ProteinModelPortal:G5EE12 SMR:G5EE12
IntAct:G5EE12 EnsemblMetazoa:K07C5.8 GeneID:179445
KEGG:cel:CELE_K07C5.8 CTD:179445 WormBase:K07C5.8 OMA:IRFWDNT
NextBio:905428 Uniprot:G5EE12
Length = 678
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 47/140 (33%), Positives = 63/140 (45%)
Query: 251 AHDDAINAIVVSKSNDGFVYTGSADTKIKVW----KKLRAALQVNKKHSLVQTLEKHKSA 306
+H D+I A+ + ++T S D IK+W KK + V T HK
Sbjct: 357 SHLDSIRAMQFHPV-EPVLFTASEDGLIKLWNLDQKKDEKHNSGGTELEPVYTFRGHKGP 415
Query: 307 VTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLA 366
V L LS G LY+G D +I + N D D VL L GHT AI +A
Sbjct: 416 VLCLVLSPTGDHLYTGGIDGNICCFNVPSSNG--DPFDSYDPRVLTETLTGHTDAIWSVA 473
Query: 367 VVSN--LLFSGSSDNTIRIW 384
S+ L S SSD+T+R+W
Sbjct: 474 YHSSNSRLVSASSDSTVRLW 493
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 75/334 (22%), Positives = 141/334 (42%)
Query: 129 AVKSLVVLGDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLK-NKYYERIATLPTLNDRFT 187
A+ + V D + ++ +D I +WK+ +Y ++ + ++ + L + + +F
Sbjct: 20 AIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS-DGQFA 78
Query: 188 KCFLANNYV-QVRRHKKCT------WVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTS 240
L+ ++ ++R T +V H V S DRT K+W T
Sbjct: 79 ---LSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL 135
Query: 241 DFRCLESVKNA--HDDAINAIVVSKSN-DGFVYTGSADTKIKVWKKLRAALQVNKKHSLV 297
C ++ A H + ++ + S + + + S D +KVW LQ N K L
Sbjct: 136 G-ECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN-----LQ-NCK--LR 186
Query: 298 QTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRG 357
TL H + +A+S DG++ SG D IL+W+ +G + + +G ++
Sbjct: 187 NTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE--AGSII------- 237
Query: 358 HTKAILCLAVVSNLLFSGSSDNTIRIWR-RSSSVTDHQK-GYSCLAVLEGHRRPVKCLTA 415
H+ LC + + +++N+IRIW S SV + K A + T
Sbjct: 238 HS---LCFSP-NRYWLCAATENSIRIWDLESKSVVEDLKVDLKAEAEKTDGSTGIGNKTK 293
Query: 416 VVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQI 449
V+ N ++D ++ ++SG D I++W I
Sbjct: 294 VIYCTSLNWSADGNT----LFSGYTDGVIRVWGI 323
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 39/143 (27%), Positives = 63/143 (44%)
Query: 245 LESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQT-LEKH 303
L+ AH D + AI N + T S D I +WK + +K + + Q + H
Sbjct: 7 LKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKE----DKSYGVAQRRMTGH 62
Query: 304 KSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAIL 363
V + LS+DG SG+ D + +W+ G + + V GHTK +L
Sbjct: 63 SHFVQDVVLSSDGQFALSGSWDGELRLWDLATG-------ESTRRFV------GHTKDVL 109
Query: 364 CLAVVSN--LLFSGSSDNTIRIW 384
+A ++ + S S D TI++W
Sbjct: 110 SVAFSTDNRQIVSASRDRTIKLW 132
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 45/184 (24%), Positives = 86/184 (46%)
Query: 231 DRTFKIW-RTSD-FRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
DRT +IW + D + C + H + + S + ++ + S D +W K +
Sbjct: 37 DRTIRIWGKDGDNWVCKSVLGEGHQRTVRKVSWSPCGN-YLASASFDATTCIWMKKK--- 92
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
++ + TLE H++ V ++A + G++L + + D+S+ VWE D+ ++
Sbjct: 93 ---EEFECITTLEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDE--------EEEYE 141
Query: 349 MVLKGALRGHTKAILCLAVVSN--LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
V L HT+ + + N LL S S D++++++R + + + C A LEGH
Sbjct: 142 CV--SVLNSHTQDVKHVVWHPNQELLASASYDDSVKLYR------EEEDDWVCCATLEGH 193
Query: 407 RRPV 410
V
Sbjct: 194 TSTV 197
Score = 125 (49.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 46/190 (24%), Positives = 82/190 (43%)
Query: 229 SWDRTFKIW--RTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
S+D T IW + +F C+ +++ H++ + ++ + S + T S D + VW+
Sbjct: 80 SFDATTCIWMKKKEEFECITTLEG-HENEVKSVAWAPSGS-LLATCSRDKSVWVWE---- 133
Query: 287 ALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDS 346
+ +++ V L H V + + +L S + D S+ ++ ++ DD
Sbjct: 134 -VDEEEEYECVSVLNSHTQDVKHVVWHPNQELLASASYDDSVKLYREEE--------DD- 183
Query: 347 GHMVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIWRRSSSVTDHQKG---YSCLA 401
V L GHT + LA L + S D T+RIWR+ + K + C+
Sbjct: 184 --WVCCATLEGHTSTVWSLAFDQTGEQLATCSDDKTVRIWRQLGTGEQGSKSDPNWKCVC 241
Query: 402 VLEG-HRRPV 410
L G H R V
Sbjct: 242 TLTGYHTRTV 251
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 65/278 (23%), Positives = 118/278 (42%)
Query: 124 TGNGDAVKSLVVL--GDKLFSAHQDHKIRVWKID-NNTSAYYSTSGKLKNKYYERIATLP 180
TG+ V+ ++V LFS +D +++ W ++ N +Y G L Y + P
Sbjct: 243 TGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYH--GHLSAVY--GLDLHP 298
Query: 181 TLNDRFTKCFLANNYVQVRRHKKCTWVH----HVDTVXXXXXXXXXXXXXXTSWDRTFKI 236
T+ D C ++ ++ + VH H + V S D T ++
Sbjct: 299 TI-DVLVTCS-RDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRL 356
Query: 237 WRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL 296
W + ++ N H ++ A+V+ + F +GS D IK WK
Sbjct: 357 WDLVAGKTRVTLTN-HKKSVRAVVLHPLHYTFA-SGSPDN-IKQWKF--------PDGGF 405
Query: 297 VQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK-GAL 355
+Q L H + + LA++TDG VL SGA + ++ +W+ G Y + H ++ G+L
Sbjct: 406 IQNLSGHNAIINTLAVNTDG-VLVSGADNGTMHLWDWRTG-Y----NFQRVHAAVQPGSL 459
Query: 356 RGHTKAILCLAVVS-NLLFSGSSDNTIRIWRRSSSVTD 392
+ C S + L + +D TI+++R + T+
Sbjct: 460 DSESGIFACAFDRSESRLLTAEADKTIKVYREDETATE 497
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 118 (46.6 bits), Expect = 0.00094, P = 0.00094
Identities = 47/190 (24%), Positives = 90/190 (47%)
Query: 245 LESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA-ALQVNKKH-SLVQTLE- 301
LE+ H + + A+ K ++ + +GS D ++VW +A + + H S+++ LE
Sbjct: 383 LEARLEGHKEGVWAV---KIHENTLVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLEI 439
Query: 302 KHKSAVTALALST---DGTVLYSGACDRSILVWERDQGN---YIVDGDDD----SGHMVL 351
S + + D + SG+ D ++ VW+ + Y+ D + +
Sbjct: 440 LVPSRLIRHGVEIVEPDQPYIVSGSRDHTLRVWKLPKNTDPPYLPDNTNSIDRWEKNPYF 499
Query: 352 KGALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSS-VTDHQKGYSC--LAVLEGHRR 408
L GHT ++ ++ ++L SGS D++IRIWR S+ H +G+S +VL R
Sbjct: 500 VHTLIGHTDSVRTISGYGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPER 559
Query: 409 PVKCLTAVVD 418
+ C++ +D
Sbjct: 560 NI-CISGSMD 568
Score = 101 (40.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 32/112 (28%), Positives = 47/112 (41%)
Query: 300 LEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHT 359
L H + ++ + + SG+ D+SI VW+ G K L GH
Sbjct: 543 LRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGT-------------CKYVLEGHD 589
Query: 360 KAILCLAVVSNLLFSGSSDNTIRIWRRSSS----VTDHQKGYSCLAVLEGHR 407
+ L V N L SGS+D+TIRIW ++ V GY V + H+
Sbjct: 590 AFVTLLNVFQNRLISGSADSTIRIWDLNTGKPLMVLPSNSGYISSFVSDEHK 641
Score = 101 (40.6 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 35/145 (24%), Positives = 62/145 (42%)
Query: 205 TWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKS 264
T + H D+V S+D + +IWR S CL ++ H I +++
Sbjct: 502 TLIGHTDSVRTISGYGDILVSG--SYDSSIRIWRVSTGECLYHLRG-HSLRIYSVLYEPE 558
Query: 265 NDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGAC 324
+ +GS D I+VW + LE H + VT L + + L SG+
Sbjct: 559 RN-ICISGSMDKSIRVWDLSTGTCKY--------VLEGHDAFVTLLNVFQNR--LISGSA 607
Query: 325 DRSILVWERDQGNYIVDGDDDSGHM 349
D +I +W+ + G ++ +SG++
Sbjct: 608 DSTIRIWDLNTGKPLMVLPSNSGYI 632
Score = 79 (32.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 26/91 (28%), Positives = 42/91 (46%)
Query: 88 LYGGSSNGEIRAW----NRDPNNYV--NITSTDVGD-HANVVAT--GNGDAVKSLVVLGD 138
+ GS + +R W N DP Y+ N S D + + V T G+ D+V+++ GD
Sbjct: 460 IVSGSRDHTLRVWKLPKNTDPP-YLPDNTNSIDRWEKNPYFVHTLIGHTDSVRTISGYGD 518
Query: 139 KLFSAHQDHKIRVWKIDNNTSAYYSTSGKLK 169
L S D IR+W++ Y+ L+
Sbjct: 519 ILVSGSYDSSIRIWRVSTGECLYHLRGHSLR 549
Score = 64 (27.6 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 22/97 (22%), Positives = 42/97 (43%)
Query: 70 KVKGNSSYIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDA 129
+++G+ + ++ I L GS + +R WN + +I + +
Sbjct: 386 RLEGHKEGVWAVKIHENTLVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLEILVPSRL 445
Query: 130 VKSLV--VLGDK--LFSAHQDHKIRVWKIDNNTSAYY 162
++ V V D+ + S +DH +RVWK+ NT Y
Sbjct: 446 IRHGVEIVEPDQPYIVSGSRDHTLRVWKLPKNTDPPY 482
>UNIPROTKB|F1P0J6 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 EMBL:AADN02023658
EMBL:AADN02023655 EMBL:AADN02023656 EMBL:AADN02023657
IPI:IPI00822582 Ensembl:ENSGALT00000040411 ArrayExpress:F1P0J6
Uniprot:F1P0J6
Length = 660
Score = 106 (42.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 38/133 (28%), Positives = 65/133 (48%)
Query: 203 KC--TWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRT-SDFRCLESVKNAHDDAINAI 259
KC T+V H V S D+T K+W T + ++C ++++ HD + A+
Sbjct: 377 KCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTLEG-HDGIVLAL 435
Query: 260 VVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVL 319
+ + +Y+GSAD I VW +Q +K V T+ H + V L S + +L
Sbjct: 436 CIQGNK---LYSGSADCTIIVWD-----IQNLQK---VNTIRAHDNPVCTLVSSHN--ML 482
Query: 320 YSGACDRSILVWE 332
+SG+ ++I VW+
Sbjct: 483 FSGSL-KAIKVWD 494
Score = 99 (39.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 297 VQTLEKHKSAVTALA-LST-DGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGA 354
V+TL H V ALA +ST D T ++S + DRS+ VW D +M+
Sbjct: 582 VRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMD-------------NMICTQT 628
Query: 355 LRGHTKAILCLAVVSNLLFSGSSDNTIRI 383
L H ++ LAV LFSG+ D+T+++
Sbjct: 629 LLRHQGSVTALAVSRGRLFSGAVDSTVKV 657
Score = 73 (30.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/103 (29%), Positives = 44/103 (42%)
Query: 312 LSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN- 370
L T G +YS A +V + N I D ++ V L GH + LAV+S
Sbjct: 545 LQTSGGSVYSIAVTNHHIVCGTYE-NLIHVWDIETKEQVR--TLTGHVGTVYALAVISTP 601
Query: 371 ---LLFSGSSDNTIRIWRRSSSVTD-----HQKGYSCLAVLEG 405
+FS S D ++R+W + + HQ + LAV G
Sbjct: 602 DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRG 644
Score = 72 (30.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 63 HQCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAW---NRDPNNYV----NITSTDV 115
++C TL+ G+ + +L I G LY GS++ I W N N + N T V
Sbjct: 419 YKCQKTLE--GHDGIVLALCIQGNKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLV 476
Query: 116 GDHANVVATGNGDAVKSLVVLGDKL 140
H N++ +G+ A+K ++G +L
Sbjct: 477 SSH-NMLFSGSLKAIKVWDIVGTEL 500
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 129 (50.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 49/177 (27%), Positives = 82/177 (46%)
Query: 299 TLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGH 358
TL+ H AV L +TDG++L+S + D+++ VW D ++G V + L+GH
Sbjct: 94 TLKGHSGAVMELHYNTDGSLLFSASTDKTVCVW-----------DSETGERVKR--LKGH 140
Query: 359 TKAI-LCLAVVSN--LLFSGSSDNTIRIW--RRSSSVTDHQKGYSCLAVLEGHRRPVKCL 413
T + C L +GS D T+++W R+ +SV Q Y L+V + +
Sbjct: 141 TSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFNDTSD-QII 199
Query: 414 TAVVDSD------------YSNRNSDHSST--------SFLVYSGSLDCEIKIWQIR 450
+ +D+D YS + S T S+L+ S S+D +++W IR
Sbjct: 200 SGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLL-SNSMDNSVRVWDIR 255
Score = 123 (48.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 40/156 (25%), Positives = 75/156 (48%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQV 290
D T K+W + + +N + + ++ + ++D + +G D IKVW L+
Sbjct: 163 DGTVKLWDIRKKASVHTFQNTYQ--VLSVTFNDTSDQII-SGGIDNDIKVWD-----LRQ 214
Query: 291 NKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMV 350
NK L+ +++ H +VT L+LS DG+ L S + D S+ VW D + + +
Sbjct: 215 NK---LIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVW--DIRPF---APKERCVKI 266
Query: 351 LKGALRGHTKAIL-CL-AVVSNLLFSGSSDNTIRIW 384
+G + K +L C + + + +GS+D + IW
Sbjct: 267 FQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIW 302
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 133 (51.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 57/251 (22%), Positives = 100/251 (39%)
Query: 105 NNYVNITSTDVGDHANVVATGNGDA-VKSLVVLGDKLFSAHQDHKIRVW---KIDNNTSA 160
N++ +T ++ D + ++A G GD+ V+ + KL + +R D N
Sbjct: 375 NSHQGVTCAEISDDSTMLACGFGDSSVRIWSLTPAKLRTLKDADSLRELDKESADINVRM 434
Query: 161 YYSTSGKLKNKYYE------RIATLPTLNDRFTKCFLANNYVQVRRHKKCTWV------H 208
SG++ R A P +N C + +R TW
Sbjct: 435 LDDRSGEVTRSLMGHTGPVYRCAFAPEMN-LLLSC---SEDSTIRLWSLLTWSCVVTYRG 490
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
HV V S+D+T ++W T + L V H ++ + N +
Sbjct: 491 HVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALR-VFVGHLSDVDCVQFHP-NSNY 548
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
V TGS+D +++W N V+ + HK +V++LA S G L SG+ D +I
Sbjct: 549 VATGSSDRTVRLWD--------NMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNI 600
Query: 329 LVWERDQGNYI 339
++W+ G+ +
Sbjct: 601 IIWDLSNGSLV 611
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 40/143 (27%), Positives = 64/143 (44%)
Query: 245 LESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQT-LEKH 303
L+ + AH D + AI N + T S D I +WK + +K + + Q L H
Sbjct: 7 LKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKD----DKSYGVAQRRLTGH 62
Query: 304 KSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAIL 363
V + LS+DG SG+ D + +W+ G + + V GHTK +L
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWDGELRLWDLATG-------ETTRRFV------GHTKDVL 109
Query: 364 CLAVVSN--LLFSGSSDNTIRIW 384
+A ++ + S S D TI++W
Sbjct: 110 SVAFSTDNRQIVSASRDRTIKLW 132
Score = 116 (45.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 58/249 (23%), Positives = 105/249 (42%)
Query: 206 WVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRT-SDFRCLESVKNAHDDAINAIVVSKS 264
+V H V S DRT K+W T + + S + H + ++ + S +
Sbjct: 101 FVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPN 160
Query: 265 N-DGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGA 323
+ + S D +KVW L ++SLV H + +A+S DG++ SG
Sbjct: 161 TLVPTIVSASWDKTVKVWNLQNCKL----RNSLVG----HSGYLNTVAVSPDGSLCASGG 212
Query: 324 CDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRI 383
D IL+W+ +G + + +G ++ H+ LC + + +++N+IRI
Sbjct: 213 KDGVILLWDLAEGKKLYSLE--AGSII-------HS---LCFSP-NRYWLCAATENSIRI 259
Query: 384 WR-RSSSVTDHQKGYSCLAVLEGHRRPVKC--LTAVVDSDYSNRNSDHSSTSFLVYSGSL 440
W S SV + K + E + V V+ N ++D S+ ++SG
Sbjct: 260 WDLESKSVVEDLK-VDLKSEAEKNEGGVGTGNQKKVIYCTSLNWSADGST----LFSGYT 314
Query: 441 DCEIKIWQI 449
D +++W I
Sbjct: 315 DGVVRVWGI 323
Score = 42 (19.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 129 AVKSLVVLGDKLFSAHQDHKIRVWKIDNNTSAY 161
A+ + + D + +A +D I +WK+ + +Y
Sbjct: 20 AIATPIDNSDIIVTASRDKSIILWKLTKDDKSY 52
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 111 (44.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 37/117 (31%), Positives = 52/117 (44%)
Query: 268 FVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRS 327
FV +GS DT IK+W V +K + + + H AV L S DG L S A D +
Sbjct: 118 FVASGSLDTDIKLW-------DVRRKGCIFK-YKSHTQAVRCLRFSPDGKWLASAADDHT 169
Query: 328 ILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
+ +W+ G + + +GH + H + LL SGSS TIR W
Sbjct: 170 VKLWDLTAGKVMFEF---TGHYGPVNVVEFHPS-------IEYLLASGSSSMTIRFW 216
Score = 67 (28.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 73 GNSSYIPSLAIAGK--LLYGGSSNGEIRAWNRDP--------NNYVNITSTDVGDHANVV 122
G+++ I SL I+ K L+ GS +G IR W+ + + NI S D + + V
Sbjct: 60 GHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFV 119
Query: 123 ATGNGD 128
A+G+ D
Sbjct: 120 ASGSLD 125
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 126 (49.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 48/219 (21%), Positives = 93/219 (42%)
Query: 140 LFSAHQDHKIRVWKIDNNTS--AYYSTSGKLKNKYYERIAT--LPTLNDRFTKCFLANNY 195
L S+ +D +R+W + T Y + + + + + +DR + + ++Y
Sbjct: 558 LLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY 617
Query: 196 VQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDA 255
+R + H+ V S DRT ++W + C+ + H
Sbjct: 618 QPLR-----IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGP 671
Query: 256 INAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTD 315
I+++ S N F+ TG+ D ++ +W + L V + L+ H V +L S D
Sbjct: 672 IHSLTFSP-NGRFLATGATDGRVLLWD-IGHGLMVGE-------LKGHTDTVCSLRFSRD 722
Query: 316 GTVLYSGACDRSILVWERDQGNYIVDGDD---DSGHMVL 351
G +L SG+ D ++ +W+ + V+ DD +GH+ L
Sbjct: 723 GEILASGSMDNTVRLWDAVKAFEDVETDDFTTATGHINL 761
Score = 118 (46.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 30/90 (33%), Positives = 45/90 (50%)
Query: 297 VQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALR 356
V+ HK + +L S +G L +GA D +L+W D GH ++ G L+
Sbjct: 662 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW-------------DIGHGLMVGELK 708
Query: 357 GHTKAILCLAVVSN--LLFSGSSDNTIRIW 384
GHT + L + +L SGS DNT+R+W
Sbjct: 709 GHTDTVCSLRFSRDGEILASGSMDNTVRLW 738
Score = 53 (23.7 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 105 NNYVNITSTDVGDHANVVATGNGDA-VKSLVVLGDKLFSAHQ 145
N Y +T+ DV D ++++A G D+ V+ V KL S Q
Sbjct: 468 NAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQ 509
Score = 38 (18.4 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 87 LLYGGSSNGEIRAWNRDP 104
L+ GG ++ +R W+ P
Sbjct: 484 LIAGGFADSTVRVWSVTP 501
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 47/188 (25%), Positives = 81/188 (43%)
Query: 231 DRTFKIW-RTSD-FRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
DR +IW R D + C +++ H A+ + S + ++ + S D +WKK
Sbjct: 37 DRAIRIWGREGDSWECKTVLQDGHQRAVRKVAWSPCGN-YLASASFDATTCIWKKK---- 91
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
N + LE H++ V +A + G L + + D+S+ +WE D+ +D
Sbjct: 92 --NDDFECLTVLEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVDE--------EDEYE 141
Query: 349 MVLKGALRGHTKAILCLA--VVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
V + HT+ + + LL S S DN + +++ + + C A LEGH
Sbjct: 142 CV--SVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYK------EEDDDWECRATLEGH 193
Query: 407 RRPVKCLT 414
V LT
Sbjct: 194 TSTVWGLT 201
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 61/287 (21%), Positives = 112/287 (39%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLPTLNDRFTKCFLANNYV 196
G L S D IR+W + ++ + + ++A P N + F A +
Sbjct: 28 GTLLASCGGDRAIRIWGREGDSWECKTVLQDGHQRAVRKVAWSPCGNYLASASFDATTCI 87
Query: 197 QVRRHK--KCTWV--HHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSD---FRCLESVK 249
+++ +C V H + V S D++ IW + + C+ SV
Sbjct: 88 WKKKNDDFECLTVLEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVDEEDEYECV-SVV 146
Query: 250 NAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTA 309
N+H + +V + + + + S D + V+K + + TLE H S V
Sbjct: 147 NSHTQDVKHVVWHPTQE-LLASCSYDNNVCVYK------EEDDDWECRATLEGHTSTVWG 199
Query: 310 LALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMV--LKGALRGHTKAILCLAV 367
L G L S + DR++ +W+ Q G D + V L G G T +
Sbjct: 200 LTFDPSGQRLASCSDDRTVKIWKECQPG---GGQDTAWKCVCTLSG-FHGRTVYDIAWCP 255
Query: 368 VSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLA-VLEGHRRPVKCL 413
++ L + D+ +R+++ + Q +S A V + H + V C+
Sbjct: 256 LTGALATACGDDGVRVFKEDETADPDQPVFSLSAHVPKAHSQDVNCI 302
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 41/122 (33%), Positives = 58/122 (47%)
Query: 295 SLVQTLEKHK-SAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKG 353
+L+Q H S +A + GT+L S DR+I +W R+ GD VL+
Sbjct: 6 ALLQKFNAHPDSRCWYVAWNPKGTLLASCGGDRAIRIWGRE-------GDSWECKTVLQD 58
Query: 354 ALRGHTKAILCLA--VVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVK 411
GH +A+ +A N L S S D T IW++ + D + CL VLEGH VK
Sbjct: 59 ---GHQRAVRKVAWSPCGNYLASASFDATTCIWKKKND--D----FECLTVLEGHENEVK 109
Query: 412 CL 413
C+
Sbjct: 110 CV 111
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 70/300 (23%), Positives = 118/300 (39%)
Query: 105 NNYVNITSTDVGDHANVVATGNGDAVKSLVVL-------GDKLFSAHQDHKIRVWKIDNN 157
N I + G+ V+ N D L + G L + +D +IRVW I
Sbjct: 319 NRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSPDGKYLATGAEDKQIRVWDITTR 378
Query: 158 TSAYYSTSGKLKNKYYERIA----TLPT-LNDRFTKCFLANNYVQVRRHKKCTWVHHVDT 212
T +G ++ Y A T+ + DR + + N + T D
Sbjct: 379 TIRI-QFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTAL------TVFTIEDG 431
Query: 213 VXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVK--NAHDDAINAIVVSKSNDGFVY 270
V S D++ ++W + +E ++ + H D++ ++ S + V
Sbjct: 432 VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLV- 490
Query: 271 TGSADTKIKVWKKL--RAALQV--NKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDR 326
TGS D IK+W+ R +Q +K V+T E H+ V ++AL+ D + SG+ DR
Sbjct: 491 TGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDR 550
Query: 327 SILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIW 384
+ W D +G L L+GH +++ +A +GS D RIW
Sbjct: 551 GVQFW-----------DPRTGSTQLM--LQGHKNSVISVAPSPTGGFFATGSGDMRARIW 597
Score = 130 (50.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 52/212 (24%), Positives = 92/212 (43%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDG-FVYTGSADTKIKVWKKLRAALQ 289
D+ ++W + R + H+ I ++ ++ DG + +GS D +++W ++
Sbjct: 367 DKQIRVWDITT-RTIRIQFAGHEQDIYSLDFAR--DGRTIASGSGDRTVRLWD-----IE 418
Query: 290 VNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYI--VDGDDDSG 347
N V T+E VT +A+S D + +G+ D+S+ VW+ QG + ++G D
Sbjct: 419 -NGTALTVFTIE---DGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPD--- 471
Query: 348 HMVLKGALRGHTKAILCLAVVSNL--LFSGSSDNTIRIWR----RSSSVTDHQKGYSCLA 401
GH ++ +A N L +GS D TI++W R + KG C+
Sbjct: 472 ---------GHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVK 522
Query: 402 VLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSF 433
EGHR V + D+ + S F
Sbjct: 523 TFEGHRDFVLSVALTPDNQWVMSGSKDRGVQF 554
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 121 (47.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 36/136 (26%), Positives = 63/136 (46%)
Query: 252 HDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA-ALQVNKKHSLVQTLEKHKSAVTAL 310
H+ + +I VS N + + S D + VW+ A K H ++L+ H V +
Sbjct: 20 HNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAH---RSLKGHSHFVQDV 76
Query: 311 ALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSN 370
+S DG SG+ D ++ +W+ +G V +GHT+ ++ +A S+
Sbjct: 77 VISHDGQFALSGSWDNTLRLWDITKG-------------VSTRLFKGHTQDVMSVAFSSD 123
Query: 371 --LLFSGSSDNTIRIW 384
+ SGS D TI++W
Sbjct: 124 NRQIISGSRDATIKVW 139
Score = 47 (21.6 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 435 VYSGSLDCEIKIWQIR 450
+ SGS D ++KIW I+
Sbjct: 171 IVSGSWDNKVKIWDIK 186
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 119 (46.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 49/183 (26%), Positives = 85/183 (46%)
Query: 231 DRTFKIWRT---SDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
D+ IW T + + SV +AH +N + + ++ + TGSAD + +W LR
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALWD-LRN- 305
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDG-TVLYSGACDRSILVWERDQ-GNYIVDGDDD 345
L++ K HS E HK + + S T+L S DR + VW+ + G D +
Sbjct: 306 LKL-KLHSF----ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 360
Query: 346 SGHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAV 402
G L GHT I + N ++ S S DN +++W+ + ++ + ++ + +
Sbjct: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASE 420
Query: 403 LEG 405
LEG
Sbjct: 421 LEG 423
Score = 53 (23.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 30/105 (28%), Positives = 48/105 (45%)
Query: 65 CSATLKVKGNS------SYIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDH 118
CS L+++G+ S+ P+L+ G LL S + I W D + + D
Sbjct: 167 CSPDLRLRGHQKEGYGLSWNPNLS--GNLL-SASDDHTICLW--DISGAPK--EGKIVD- 218
Query: 119 ANVVATGNGDAVKSLV--VLGDKLF-SAHQDHKIRVWKI-DNNTS 159
A + TG+ V+ + +L + LF S D K+ +W NNTS
Sbjct: 219 AKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTS 263
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 136 (52.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 52/144 (36%), Positives = 68/144 (47%)
Query: 286 AALQVNKKHSLVQTLEKHKS-AVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDD 344
A L + + L+ T K +S AV +A TD T+ R +LV R N +VD DD
Sbjct: 303 AVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITL-------RRVLVGHRAAVN-VVDFDD 354
Query: 345 D-----SGHMVLK----------GALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSS 389
SG +K L GH + I CL L+ SGSSDNTIR+W
Sbjct: 355 KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW----- 409
Query: 390 VTDHQKGYSCLAVLEGHRRPVKCL 413
D + G +CL VLEGH V+C+
Sbjct: 410 --DIECG-ACLRVLEGHEELVRCI 430
Score = 37 (18.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 148 KIRVWKIDNNTSAYYSTSGKLKNKYYER 175
K +W+I N TS+ + + YE+
Sbjct: 24 KNTLWQISNGTSSVIVSRKRPSEGNYEK 51
>UNIPROTKB|B4JPT9 [details] [associations]
symbol:GH13339 "Ribosome biogenesis protein WDR12 homolog"
species:7222 "Drosophila grimshawi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH916372 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001992994.1 ProteinModelPortal:B4JPT9 STRING:B4JPT9
EnsemblMetazoa:FBtr0148753 GeneID:6566798 KEGG:dgr:Dgri_GH13339
FlyBase:FBgn0120815 InParanoid:B4JPT9 Uniprot:B4JPT9
Length = 419
Score = 125 (49.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 36/116 (31%), Positives = 66/116 (56%)
Query: 228 TSWDRTFKIWRTS-DFRCLE--SVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK-K 283
TS D+T +W+ + D ++ SV H+ +++++ VS F TGS DT +K+W +
Sbjct: 165 TSQDQTAMLWQWNIDSNAVDCVSVCKGHERSVDSVAVSPDAQRFA-TGSWDTMLKLWSAE 223
Query: 284 LRAALQVNKKH---SLVQT----LEKHKSAVTALALSTDGTVLYSGACDRSILVWE 332
L A++ + K S V+T L+ H+ +++A+ DGT L +G+ D ++ VW+
Sbjct: 224 LEDAVEGSAKRAKESGVRTPKMTLQGHRESISAVQWM-DGTTLLTGSWDHTLKVWD 278
Score = 46 (21.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
++ FL SGS D + K+W R
Sbjct: 346 TTEEFLFVSGSYDNQNKLWDCR 367
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 123 (48.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 48/163 (29%), Positives = 77/163 (47%)
Query: 230 WDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYT-GSADTKIKVWKKLRAAL 288
WDRT K+W ++ + L++ + H+ +N + VS DG + T G D+K +W
Sbjct: 171 WDRTVKVWNLANCK-LKNNHHGHNGYLNTVTVSP--DGSLCTSGGKDSKALLW------- 220
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
+N +L TLE H + AL S + L A SI +W+ + ++
Sbjct: 221 DLNDGKNLY-TLE-HNDIINALCFSPNRYWLCV-AYGPSIKIWDLACKKTV----EELRP 273
Query: 349 MVLKGALRGHTKAILCLAVVSN--LLFSGSSDNTIRIWRRSSS 389
V+ + L LA ++ LF+G SDNTIR+W+ S S
Sbjct: 274 EVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSVS 316
Score = 44 (20.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 138 DKLFSAHQDHKIRVWKIDNNTSAYY 162
D + SA +D + VWK+ + Y
Sbjct: 29 DTIISASRDKTLIVWKLTRDEDTNY 53
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 116 (45.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 48/183 (26%), Positives = 83/183 (45%)
Query: 231 DRTFKIWRT-SDFRCLES-VKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D+ +W T S+ S + +AH +N + + ++ + TGSAD + +W LR
Sbjct: 248 DQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD-LR--- 303
Query: 289 QVNKKHSLVQTLEKHKSAVTALALST--DGTVLYSGACDRSILVWERDQ-GNYIVDGDDD 345
N K L T E HK + + + + T+L S DR + VW+ + G D +
Sbjct: 304 --NLKLKL-HTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 360
Query: 346 SGHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAV 402
G L GHT I + N ++ S S DN ++IW+ + ++ + ++ +
Sbjct: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSE 420
Query: 403 LEG 405
LEG
Sbjct: 421 LEG 423
Score = 56 (24.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 26/104 (25%), Positives = 48/104 (46%)
Query: 64 QCSATLKVKGNSSYIPSLA----IAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHA 119
+C+ L+++G+ L+ ++G LL S + + W D N + D A
Sbjct: 165 ECNPDLRLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLW--DIN--AGPKEGKIVD-A 218
Query: 120 NVVATGNGDAVKSLV--VLGDKLF-SAHQDHKIRVWKIDNNTSA 160
V TG+ V+ + +L + LF S D K+ +W +NT++
Sbjct: 219 KAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTS 262
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 113 (44.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 47/172 (27%), Positives = 79/172 (45%)
Query: 231 DRTFKIWRT-SDFRCLESVK-NAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D+ IW T S+ S +AH +N + + ++ + TGSAD + +W LR L
Sbjct: 248 DQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD-LRN-L 305
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDG-TVLYSGACDRSILVWERDQ-GNYIVDGDDDS 346
++ K HS E HK + + S T+L S DR + VW+ + G D +
Sbjct: 306 KL-KLHSF----ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
Query: 347 GHMVLKGALRGHTKAILCLAVVSN---LLFSGSSDNTIRIWRRSSSVTDHQK 395
G L GHT I + N ++ S S DN ++IW+ + ++ + ++
Sbjct: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
Score = 59 (25.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 28/109 (25%), Positives = 49/109 (44%)
Query: 64 QCSATLKVKGNSSYIPSLA----IAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHA 119
+CS L+++G+ L+ ++G LL S + + W+ V D A
Sbjct: 165 ECSPDLRLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDISAGP----KEGKVVD-A 218
Query: 120 NVVATGNGDAVKSLV--VLGDKLF-SAHQDHKIRVWKIDNNTSAYYSTS 165
V TG+ V+ + +L + LF S D K+ +W +NT++ S S
Sbjct: 219 KAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHS 267
>UNIPROTKB|Q13112 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9606 "Homo sapiens" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0042393 "histone binding" evidence=NAS]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0033186
"CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin assembly"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=TAS]
[GO:0051082 "unfolded protein binding" evidence=TAS] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=TAS]
[GO:0006461 "protein complex assembly" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005737 GO:GO:0006461
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 GO:GO:0051082 GO:GO:0006281
eggNOG:COG2319 GO:GO:0006351 GO:GO:0003682 GO:GO:0007049
GO:GO:0042393 GO:GO:0006335 GO:GO:0033186 HOGENOM:HOG000183312
KO:K10751 OMA:VYDICWT CTD:8208 OrthoDB:EOG4G4GQD PRINTS:PR00319
EMBL:U20980 EMBL:AP000694 EMBL:AP001725 EMBL:BC021218 EMBL:X98262
IPI:IPI00011857 PIR:B56731 RefSeq:NP_005432.1 UniGene:Hs.75238
ProteinModelPortal:Q13112 SMR:Q13112 DIP:DIP-29243N IntAct:Q13112
STRING:Q13112 PhosphoSite:Q13112 DMDM:3121829 PaxDb:Q13112
PRIDE:Q13112 DNASU:8208 Ensembl:ENST00000314103 GeneID:8208
KEGG:hsa:8208 UCSC:uc002yvj.3 GeneCards:GC21P037757 HGNC:HGNC:1911
HPA:CAB033604 HPA:HPA021679 MIM:601245 neXtProt:NX_Q13112
PharmGKB:PA26447 HOVERGEN:HBG050780 InParanoid:Q13112
PhylomeDB:Q13112 ChiTaRS:CHAF1B GenomeRNAi:8208 NextBio:30919
Bgee:Q13112 CleanEx:HS_CHAF1B CleanEx:HS_MPP7 Genevestigator:Q13112
GermOnline:ENSG00000159259 Uniprot:Q13112
Length = 559
Score = 130 (50.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 41/142 (28%), Positives = 62/142 (43%)
Query: 271 TGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILV 330
+ DT +++WK + + L +H AV + S G +L SG D IL+
Sbjct: 34 SAGVDTNVRIWK-VEKGPDGKAIVEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVILL 92
Query: 331 W---ERDQGNYIVDGDDDSGHM------VLKGALRGHTKAI--LCLAVVSNLLFSGSSDN 379
W + + I D+D + V+K LRGH + + +C A NL+ S S DN
Sbjct: 93 WKVNDNKEPEQIAFQDEDEAQLNKENWTVVK-TLRGHLEDVYDICWATDGNLMASASVDN 151
Query: 380 TIRIWRRSS----SVTDHQKGY 397
T IW S S+ + K Y
Sbjct: 152 TAIIWDVSKGQKISIFNEHKSY 173
Score = 44 (20.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 139 KLFSAHQDHKIRVWKID 155
+L SA D +R+WK++
Sbjct: 31 RLASAGVDTNVRIWKVE 47
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 40/158 (25%), Positives = 72/158 (45%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S+D+T K+W +C + + H I + + + V TGS DT K+W +
Sbjct: 154 SFDKTCKLWSVETGKCYHTFRG-HTAEIVCLSFNPQST-LVATGSMDTTAKLWD-----I 206
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
Q ++ V TL H + + +L+ +T G + +G+ D +++VW+ D G +
Sbjct: 207 QNGEE---VYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKV--------- 254
Query: 349 MVLKGALRGHTKAILCLAVV--SNLLFSGSSDNTIRIW 384
L GH I + +L+ +GS D T ++W
Sbjct: 255 ----NILIGHCAEISSASFNWDCSLILTGSMDKTCKLW 288
Score = 104 (41.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 26/111 (23%), Positives = 53/111 (47%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S+DRT K+W T+ L +++ H + + AI + + TGS D K+W ++
Sbjct: 111 SYDRTCKLWDTASGEELNTLEG-HRNVVYAIAFNNPYGDKIATGSFDKTCKLW-----SV 164
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYI 339
+ K + T H + + L+ + T++ +G+ D + +W+ G +
Sbjct: 165 ETGKCY---HTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEV 212
Score = 63 (27.2 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 24/66 (36%), Positives = 32/66 (48%)
Query: 343 DDDSGHMVLKGALRGHTKAIL--CLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCL 400
D +G V L GH IL C L+ + S+D T RI+ S+ T +K C+
Sbjct: 289 DATNGKCV--ATLTGHDDEILDSCFDYTGKLIATASADGTARIF---SAAT--RK---CI 338
Query: 401 AVLEGH 406
A LEGH
Sbjct: 339 AKLEGH 344
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 128 (50.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 44/134 (32%), Positives = 60/134 (44%)
Query: 297 VQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALR 356
V LE H S VT L D L SG+ D++I +W NY + + L
Sbjct: 306 VALLEGHSSGVTCLQF--DQCKLISGSMDKTIRIW-----NY------RTSECI--SILH 350
Query: 357 GHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAV 416
GHT ++LCL S LL SGS+D T+++W H G + L GH PV + +
Sbjct: 351 GHTDSVLCLTFDSTLLVSGSADCTVKLW--------HFSGGKRIT-LRGHTGPVNSVRII 401
Query: 417 VDSDYSNRNSDHSS 430
D SD S+
Sbjct: 402 RDRGLVLSGSDDST 415
Score = 121 (47.7 bits), Expect = 0.00036, P = 0.00036
Identities = 62/283 (21%), Positives = 112/283 (39%)
Query: 121 VVATGNGDAVKSLVVLGDKLFSAHQDHKIRVWKIDN--NTSAYYSTSGKLKNKYYERIAT 178
VV +G+ D V L ++ + L S D IR+W + + S + +++
Sbjct: 267 VVLSGHSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKL 326
Query: 179 LPTLNDRFTKCFLANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWR 238
+ D+ + + NY R +C + H T S D T K+W
Sbjct: 327 ISGSMDKTIRIW---NY----RTSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWH 379
Query: 239 TSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWK-KLRAALQVNKKH-SL 296
S + + H +N++ + + G V +GS D+ IK+W + L H
Sbjct: 380 FSGGKRI--TLRGHTGPVNSVRIIRDR-GLVLSGSDDSTIKIWSLETNTCLHTFSAHIGP 436
Query: 297 VQTLEKHKSAVTALALSTDGTV----LYSGACDRSIL-----VWERDQGNY-IVDGDDDS 346
VQ+L S + + +L DGT+ + C ++ VWE + ++ G D
Sbjct: 437 VQSLALADSRLFSCSL--DGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLRLISGAHDG 494
Query: 347 GHMVLKGA-----LRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
V + L+ H++ + +A+ + SGS D I +W
Sbjct: 495 VVKVWEACECVHTLKNHSEPVTSVALGDCEVVSGSEDGKIYLW 537
Score = 47 (21.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 434 LVYSGSLDCEIKIWQI 449
LV SGS D IKIW +
Sbjct: 406 LVLSGSDDSTIKIWSL 421
>MGI|MGI:1314881 [details] [associations]
symbol:Chaf1b "chromatin assembly factor 1, subunit B (p60)"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0031497
"chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1 complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:1314881 GO:GO:0005829
GO:GO:0005813 GO:GO:0005654 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0007049
GO:GO:0031497 GO:GO:0033186 GeneTree:ENSGT00550000074968
HOGENOM:HOG000183312 KO:K10751 OMA:VYDICWT CTD:8208
OrthoDB:EOG4G4GQD PRINTS:PR00319 HOVERGEN:HBG050780 EMBL:AK011243
EMBL:BC013532 IPI:IPI00132770 RefSeq:NP_082359.1 UniGene:Mm.274222
ProteinModelPortal:Q9D0N7 SMR:Q9D0N7 STRING:Q9D0N7
PhosphoSite:Q9D0N7 PRIDE:Q9D0N7 Ensembl:ENSMUST00000023666
Ensembl:ENSMUST00000117099 GeneID:110749 KEGG:mmu:110749
UCSC:uc008aac.1 InParanoid:Q9D0N7 NextBio:364585 Bgee:Q9D0N7
CleanEx:MM_CHAF1B Genevestigator:Q9D0N7
GermOnline:ENSMUSG00000022945 Uniprot:Q9D0N7
Length = 572
Score = 132 (51.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 41/142 (28%), Positives = 63/142 (44%)
Query: 271 TGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILV 330
+ DT +++WK L + L +H AV + S G +L SG D IL+
Sbjct: 34 SAGVDTAVRIWK-LERGPDGKAIVEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVILL 92
Query: 331 WERDQGN---YIVDGDDDSGHM------VLKGALRGHTKAI--LCLAVVSNLLFSGSSDN 379
W+ + I D++ + V+K LRGH + + +C A NL+ S S DN
Sbjct: 93 WKMNDSKEPEQIAFQDEEEAQLNKENWTVVK-TLRGHLEDVYDICWATDGNLMTSASVDN 151
Query: 380 TIRIWRRSS----SVTDHQKGY 397
T+ IW S S+ + K Y
Sbjct: 152 TVIIWDVSKGQKISIFNEHKSY 173
Score = 42 (19.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 139 KLFSAHQDHKIRVWKID 155
+L SA D +R+WK++
Sbjct: 31 RLASAGVDTAVRIWKLE 47
>RGD|1307634 [details] [associations]
symbol:Chaf1b "chromatin assembly factor 1, subunit B (p60)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0031497 "chromatin
assembly" evidence=IEA;ISO] [GO:0033186 "CAF-1 complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:1307634 GO:GO:0005829 GO:GO:0005813
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 HOGENOM:HOG000183312 KO:K10751
OMA:VYDICWT CTD:8208 OrthoDB:EOG4G4GQD PRINTS:PR00319
HOVERGEN:HBG050780 EMBL:CH474083 EMBL:BC097460 IPI:IPI00370803
RefSeq:NP_001019912.1 UniGene:Rn.159953 STRING:Q4V8B4
Ensembl:ENSRNOT00000002299 GeneID:288242 KEGG:rno:288242
UCSC:RGD:1307634 InParanoid:Q4V8B4 NextBio:627840
Genevestigator:Q4V8B4 Uniprot:Q4V8B4
Length = 572
Score = 131 (51.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 40/142 (28%), Positives = 63/142 (44%)
Query: 271 TGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILV 330
+ DT +++WK + + L +H AV + S G +L SG D IL+
Sbjct: 34 SAGVDTAVRIWK-VEKGPDGKAIVEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVILL 92
Query: 331 WERDQGN---YIVDGDDDSGHM------VLKGALRGHTKAI--LCLAVVSNLLFSGSSDN 379
W+ + I D+D + V+K LRGH + + +C A N++ S S DN
Sbjct: 93 WKMNDSKEPEQIAFQDEDEAQLNKENWTVVK-TLRGHLEDVYDICWATDGNMMASASVDN 151
Query: 380 TIRIWRRSS----SVTDHQKGY 397
T+ IW S S+ + K Y
Sbjct: 152 TVIIWDVSKGQKISIFNEHKSY 173
Score = 43 (20.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 139 KLFSAHQDHKIRVWKID 155
+L SA D +R+WK++
Sbjct: 31 RLASAGVDTAVRIWKVE 47
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 117 (46.2 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 32/110 (29%), Positives = 50/110 (45%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQV 290
D T KIW + ++ K H+ +N S + ++ +GS+D+ IK+ L L
Sbjct: 207 DNTIKIWDIRTNKLIQHYK-VHNAGVNCFSFHPSGN-YLISGSSDSTIKILDLLEGRL-- 262
Query: 291 NKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWER--DQGNY 338
+ TL HK V + S DG + SG D +L+W+ D NY
Sbjct: 263 ------IYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTNFDSLNY 306
Score = 117 (46.2 bits), Expect = 0.00073, P = 0.00073
Identities = 54/256 (21%), Positives = 103/256 (40%)
Query: 137 GDKLFSAHQDHKIRVW--KIDNNTSAYYSTSGKLKNKYYERIAT-LPTLND-RFTKCFLA 192
G + S+ +D +R+W I ++ + + + +++ ++ R L T +D + K +
Sbjct: 72 GSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVW-- 129
Query: 193 NNYVQVRRHKKCTWVH-HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNA 251
V R K ++ H + V DRT ++W TS +C+ +
Sbjct: 130 ----GVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDY 185
Query: 252 HDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALA 311
A V S+ + + AD IK+W ++ NK L+Q + H + V +
Sbjct: 186 GGSA--TFVDFNSSGTCIASSGADNTIKIWD-----IRTNK---LIQHYKVHNAGVNCFS 235
Query: 312 LSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAVV--S 369
G L SG+ D +I + + +G I L GH +L +
Sbjct: 236 FHPSGNYLISGSSDSTIKILDLLEGRLIY-------------TLHGHKGPVLTVTFSRDG 282
Query: 370 NLLFSGSSDNTIRIWR 385
+L SG +D+ + +W+
Sbjct: 283 DLFASGGADSQVLMWK 298
Score = 111 (44.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 32/127 (25%), Positives = 56/127 (44%)
Query: 206 WVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSN 265
+V H D + +S D+T ++W T + +V AH ++ ++ S+
Sbjct: 56 FVGHTDVITGVNFAPSGSLVASSSRDQTVRLW-TPSIKGESTVFKAHTASVRSVHFSRDG 114
Query: 266 DGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACD 325
V T S D +KVW V +K L +L +H + V S DG ++ S D
Sbjct: 115 QRLV-TASDDKSVKVWG-------VERKKFLY-SLNRHTNWVRCARFSPDGRLIASCGDD 165
Query: 326 RSILVWE 332
R++ +W+
Sbjct: 166 RTVRLWD 172
Score = 56 (24.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 20/73 (27%), Positives = 32/73 (43%)
Query: 85 GKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVLGDKLFSAH 144
G+L+ + +R W+ + +NI TD G A V D S G + S+
Sbjct: 156 GRLIASCGDDRTVRLWDTSSHQCINIF-TDYGGSATFV-----DFNSS----GTCIASSG 205
Query: 145 QDHKIRVWKIDNN 157
D+ I++W I N
Sbjct: 206 ADNTIKIWDIRTN 218
Score = 53 (23.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 411 KCLTAVVDSDYSNRNSDHSSTSFLVYSGSLDCEIKIWQIR 450
+C+ D S D +S+ + S D IKIW IR
Sbjct: 177 QCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIR 216
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 64/278 (23%), Positives = 118/278 (42%)
Query: 124 TGNGDAVKSLVVL--GDKLFSAHQDHKIRVWKID-NNTSAYYSTSGKLKNKYYERIATLP 180
TG+ V+ ++V LFS +D +++ W ++ N +Y G L Y + P
Sbjct: 243 TGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYH--GHLSAVY--GLDLHP 298
Query: 181 TLNDRFTKCFLANNYVQVRRHKKCTWVH----HVDTVXXXXXXXXXXXXXXTSWDRTFKI 236
T+ D C ++ ++ + VH H + V S D T ++
Sbjct: 299 TI-DVLVTCS-RDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRL 356
Query: 237 WRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSL 296
W + ++ N H ++ A+V+ + F +GS D IK WK S
Sbjct: 357 WDLVAGKTRVTLTN-HKKSVRAVVLHPRHYTFA-SGSPDN-IKQWKF--------PDGSF 405
Query: 297 VQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLK-GAL 355
+Q L H + + L +++DG VL SGA + ++ +W+ G Y + H ++ G+L
Sbjct: 406 IQNLSGHNAIINTLTVNSDG-VLVSGADNGTMHLWDWRTG-Y----NFQRVHAAVQPGSL 459
Query: 356 RGHTKAILCLAVVS-NLLFSGSSDNTIRIWRRSSSVTD 392
+ C S + L + +D TI+++R + T+
Sbjct: 460 DSESGIFACAFDQSESRLLTAEADKTIKVYREDDTATE 497
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 127 (49.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 45/156 (28%), Positives = 77/156 (49%)
Query: 232 RTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDG-FVYTGSADTKIKVWKKLRAALQV 290
+T I +T ++ L+ H +I+++ S DG ++ + SAD IK+W +
Sbjct: 26 QTESIPQTPNY-ILKYTLKGHLKSISSVKFSP--DGKWLASASADKTIKIWGAYDGKFE- 81
Query: 291 NKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMV 350
+TLE HK ++ +A S D ++ S + D++I +W D +SG MV
Sbjct: 82 -------RTLEGHKEGISDIAWSQDSKLICSASDDKTIKIW-----------DVESGKMV 123
Query: 351 LKGALRGHTKAILCLAV--VSNLLFSGSSDNTIRIW 384
L+GH + + ++ SNL+ SGS D +RIW
Sbjct: 124 K--TLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIW 157
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 34/154 (22%), Positives = 70/154 (45%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQV 290
D+T KIW + ++++K H + + + + ++ + +GS D +++W V
Sbjct: 109 DKTIKIWDVESGKMVKTLKG-HKEYVFGVSFNPQSN-LIVSGSFDENVRIW-------DV 159
Query: 291 NKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMV 350
N + + H VT + + DGT++ SG+ D ++ +W+ G + + G V
Sbjct: 160 NTGEC-TKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEV 218
Query: 351 LKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIW 384
+ K +L +G+ DNT+R+W
Sbjct: 219 SFVKFSPNGKFVL----------AGTLDNTLRLW 242
Score = 114 (45.2 bits), Expect = 0.00084, P = 0.00084
Identities = 32/134 (23%), Positives = 60/134 (44%)
Query: 203 KCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVS 262
K T H+ ++ S D+T KIW D + E H + I+ I S
Sbjct: 39 KYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGK-FERTLEGHKEGISDIAWS 97
Query: 263 KSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSG 322
+ + + + S D IK+W ++ K +V+TL+ HK V ++ + ++ SG
Sbjct: 98 QDSK-LICSASDDKTIKIWD-----VESGK---MVKTLKGHKEYVFGVSFNPQSNLIVSG 148
Query: 323 ACDRSILVWERDQG 336
+ D ++ +W+ + G
Sbjct: 149 SFDENVRIWDVNTG 162
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 116 (45.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 239 TSDFRCLESVKNAHDDAINAIVVSKSN-DGF--VYTGSADTKIKVWKKLRAALQVNKKHS 295
++ + L ++AH+DAI +S DG + TGS D +KVWK ++K
Sbjct: 2 STQYSILFKQEHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWK------WSDEKLE 55
Query: 296 LVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGD 343
L TLE H+ V ++ +S +G + S + D I +W+ + G I D
Sbjct: 56 LQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMD 103
Score = 50 (22.7 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 24/70 (34%), Positives = 30/70 (42%)
Query: 360 KAILCLAVVSN--LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAVV 417
K IL +A + L SG+ D I I+ D G L LEGH P++ LT
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIF-------DIATG-KLLHTLEGHAMPIRSLTFSP 200
Query: 418 DSDYSNRNSD 427
DS SD
Sbjct: 201 DSQLLVTASD 210
>TAIR|locus:2096254 [details] [associations]
symbol:LRS1 "AT3G05090" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010311 KO:K15361
InterPro:IPR021772 Pfam:PF11816 GO:GO:0080008 HOGENOM:HOG000007343
OMA:NRLYSAG EMBL:AY056292 EMBL:AY127022 EMBL:AY142674 EMBL:BT000631
EMBL:AK226843 IPI:IPI00517137 RefSeq:NP_566246.1 RefSeq:NP_850516.1
UniGene:At.48620 ProteinModelPortal:Q93ZS6 SMR:Q93ZS6 PaxDb:Q93ZS6
PRIDE:Q93ZS6 EnsemblPlants:AT3G05090.1 EnsemblPlants:AT3G05090.2
GeneID:819671 KEGG:ath:AT3G05090 TAIR:At3g05090 InParanoid:Q93ZS6
PhylomeDB:Q93ZS6 ProtClustDB:CLSN2688081 ArrayExpress:Q93ZS6
Genevestigator:Q93ZS6 Uniprot:Q93ZS6
Length = 753
Score = 122 (48.0 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 287 ALQVNKKHSLVQTLEK-HKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDD 345
++Q + H T+ K HK +V ALA++ GT+L SG ++ + VW D
Sbjct: 195 SVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVW-----------DPR 243
Query: 346 SGHMVLKGALRGHTK--AILCLAVVSNLLFSGSSDNTIRIW 384
+G +K LRGHT +L L SGSSD+ IR+W
Sbjct: 244 TGSKSMK--LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLW 282
Score = 55 (24.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 61 SEHQCSATLKVKGNSSYIPSLAIAGK---LLYGGSSNGEIRAWN 101
S+ C+ TL+ +S Y+ LA+A K ++ G GE+ W+
Sbjct: 114 SDGVCTRTLRQ--HSDYVTCLAVAAKNNNVVASGGLGGEVFIWD 155
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 115 (45.5 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 45/184 (24%), Positives = 78/184 (42%)
Query: 231 DRTFKIWRTSD--FRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
D+ +IW + + + + H I I S ++ + S D +W K
Sbjct: 35 DKAIRIWSLNGNTWTTKTILSDGHKRTIREIRWSPCGQ-YLASASFDGTTAIWSKSSGEF 93
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
+ N TLE H++ V +++ S G +L + + D+S+ +WE V GDD+
Sbjct: 94 ECNA------TLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWE-------VAGDDE--- 137
Query: 349 MVLKGALRGHTKAILCLA--VVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
L HT+ + + LL S S DNTI+++ + +D + C+A L H
Sbjct: 138 FECAAVLNPHTQDVKRVVWHPTKELLASASYDNTIKMFAEDALDSD----WDCVATLSSH 193
Query: 407 RRPV 410
V
Sbjct: 194 TSTV 197
Score = 48 (22.0 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 137 GDKLFSAHQDHKIRVWKIDNNT 158
G+ S +D IR+W ++ NT
Sbjct: 26 GNVFASCGEDKAIRIWSLNGNT 47
Score = 39 (18.8 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 427 DHSSTSFLVYSGSLDCEIKIWQ 448
D +T + S S D +KIWQ
Sbjct: 201 DFDATGERLVSCSDDTSLKIWQ 222
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 123 (48.4 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 56/230 (24%), Positives = 101/230 (43%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF-VYTGSADTKIKVWKKLRAA 287
S D+T +IW L + K+ H + + ++ S D + + + +I +W +
Sbjct: 124 SGDQTMRIWDIELELPLHTCKS-HKSWV--LCIAWSPDATKIASACKNGEICIWNA-KTG 179
Query: 288 LQVNKKHSLVQTLEKHKSAVTALA---LSTDGTVLYSGAC--DRSILVWERDQGNYIVDG 342
Q+ K TL++HK +T+LA + D T +C D +I +W+ QG +
Sbjct: 180 EQIGK------TLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTVV--- 230
Query: 343 DDDSGHMVLKGALRGHTKAILCLAVVSN-LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLA 401
L GHT ++ CL L++SGS D T+++WR G C
Sbjct: 231 ----------RCLSGHTASVTCLRWGGEGLIYSGSQDRTVKMWRADD-------GVMCRN 273
Query: 402 VLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLD-CEIKIWQIR 450
+ GH + T +++DY+ R S + + +++ C+ K+ Q R
Sbjct: 274 -MTGHAHWIN--TLALNTDYALRTSCFEPSKRCIKPDTVEECQ-KVAQTR 319
Score = 43 (20.2 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 429 SSTSFLVYSGSLDCEIKIWQIR 450
S+ S L+ SGS D +K+++++
Sbjct: 411 SADSRLLVSGSADSTLKVFELK 432
Score = 42 (19.8 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 64 QCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAWN 101
+CSA++ G + G+ L GS + +R W+
Sbjct: 96 RCSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWD 133
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 125 GNGDAVKSLVVLGDK--LFSAHQDHKIRVWKID 155
G+G+ V S D L S D +R+W I+
Sbjct: 103 GHGEPVISAQFSPDGRGLASGSGDQTMRIWDIE 135
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 129 (50.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 47/184 (25%), Positives = 82/184 (44%)
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
H D V S+D +IW T++ +C++++ + + + A V N +
Sbjct: 204 HSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPV-AFVKFSPNGKY 262
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
+ + + D +K+W + + K++ Q E +K + A T G + SG+ D I
Sbjct: 263 ILSSNLDNTLKLWDFGKG--KTLKQY---QGHENNKYCIFANFSVTGGKWIISGSEDCKI 317
Query: 329 LVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAV--VSNLLFSGS--SDNTIRIW 384
VW Q +V +L GHT+A++ + N++ SG+ DNTIRIW
Sbjct: 318 YVWNL-QTKEVVQ------------SLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
Query: 385 RRSS 388
R S
Sbjct: 365 RSDS 368
Score = 38 (18.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 71 VKGNSSYIPSLAIA--GKLLYGGSSNGEIRAWN 101
++G++ I ++ + GK L S++ ++ WN
Sbjct: 75 IEGHTKSISAVKFSPCGKFLGTSSADKTVKIWN 107
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 128 (50.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 49/198 (24%), Positives = 84/198 (42%)
Query: 243 RCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEK 302
RC S++ H +A+ ++ S + ++ +GS DT ++ W L H T +
Sbjct: 56 RCTSSLEG-HSEAVISVAFSPTGK-YLASGSGDTTVRFWD-----LSTETPHF---TCQG 105
Query: 303 HKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAI 362
H+ V +++ S DG L SG + IL+W+ G + G +GH + G +
Sbjct: 106 HRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGKQV--GRVLAGHSKW---ITGLSWEP 160
Query: 363 LCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAVVDSDYS 422
L + S S D ++R+W D G C +L GH + V CL D
Sbjct: 161 LHANPECRYMASSSKDGSVRVW-------DTTAG-RCERILTGHTQSVTCLRWGGDGLLY 212
Query: 423 NRNSDHSSTSFLVYSGSL 440
+ + D + + + G L
Sbjct: 213 SASQDRTIKVWRAHDGVL 230
Score = 94 (38.1 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 37/158 (23%), Positives = 63/158 (39%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQV 290
D T +W ++ + + H IN ++ S + + + S D IK+W
Sbjct: 301 DFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSR-IIASASFDKSIKLWD-------- 351
Query: 291 NKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMV 350
+ + +L H +AV +A S D +L SG+ D ++ VW+ D
Sbjct: 352 GRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAAD--------- 402
Query: 351 LKGALRGHTKAILCL--AVVSNLLFSGSSDNTIRIWRR 386
L GH + + + + SG D +RIWRR
Sbjct: 403 ----LPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 436
Score = 60 (26.2 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 108 VNITSTDVGDHANVVATGNGDAVKSLVVLGDKL-FSAHQDHKIRVWK 153
V + T G + TG+ +V L GD L +SA QD I+VW+
Sbjct: 179 VRVWDTTAG-RCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWR 224
Score = 53 (23.7 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 64 QCSATLKVKGNSSYIPSLAIA--GKLLYGGSSNGEIRAWN 101
+C+++L+ G+S + S+A + GK L GS + +R W+
Sbjct: 56 RCTSSLE--GHSEAVISVAFSPTGKYLASGSGDTTVRFWD 93
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 47/188 (25%), Positives = 83/188 (44%)
Query: 231 DRTFKIW-RTSD-FRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
DR +IW + D + C + + H + + S ++ + S D +WKK
Sbjct: 37 DRAIRIWGKEGDSWECKCVLSDGHQRTVRKVAWSPCGK-YLASASFDATTCIWKK----- 90
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGH 348
++ + LE H++ V +A + G++L + + D+S+ +WE VD +D+ +
Sbjct: 91 -TDEDFECLTVLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWE-------VDEEDE--Y 140
Query: 349 MVLKGALRGHTKAILCLA--VVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGH 406
L + HT+ + + LL S S DN I I++ + + C A LEGH
Sbjct: 141 ECLS-VVNSHTQDVKHVVWHPTQELLASASYDNKICIYK------EEDDDWECRATLEGH 193
Query: 407 RRPVKCLT 414
V LT
Sbjct: 194 ESTVWSLT 201
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 46/193 (23%), Positives = 86/193 (44%)
Query: 229 SWDRTFKIWRTSD---FRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLR 285
S D++ IW + + CL SV N+H + +V + + + + S D KI ++K
Sbjct: 124 SRDKSVWIWEVDEEDEYECL-SVVNSHTQDVKHVVWHPTQE-LLASASYDNKICIYK--- 178
Query: 286 AALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDD 345
+ + TLE H+S V +L +G L S + DR++ +W+ DG D
Sbjct: 179 ---EEDDDWECRATLEGHESTVWSLTFDPEGRRLASCSDDRTVKIWKESTTG---DGSSD 232
Query: 346 SGHMVLKGALRG-HTKAILCLAV--VSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLA- 401
+ L G H + I +A ++ L + D+ +R++ + Q ++ A
Sbjct: 233 ESWKCIC-TLSGFHGRTIYDIAWCRLTGALATACGDDGVRVFSEDPTADPEQPIFALSAH 291
Query: 402 VLEGHRRPVKCLT 414
V + H + V C++
Sbjct: 292 VPKAHNQDVNCVS 304
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 130 (50.8 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 37/112 (33%), Positives = 56/112 (50%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAI-NAIVVSKSNDGFVYTGSADTKIKVWKKLRAA 287
S DRT +IW +C+++++ H AI I +S+ V + +AD +KVW L +
Sbjct: 526 SGDRTIRIWNVDTQQCVQTLEG-HTGAILKLIYISQGTQ--VVSAAADGLVKVWS-LSSG 581
Query: 288 LQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYI 339
V TL+ H+ V ALA DG++L SG D + VW+ YI
Sbjct: 582 -------ECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEEYI 626
Score = 121 (47.7 bits), Expect = 0.00050, P = 0.00050
Identities = 69/299 (23%), Positives = 113/299 (37%)
Query: 107 YVNITSTDVGDHANVVATGNGDAVKSLVVLGDKLFSAH--QDHKIRVWKI---DNNTSAY 161
++++ STD G V G+ D V +L D ++ A +D+ +R+W + DN
Sbjct: 345 FIDVISTD-GTQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCI 403
Query: 162 YSTSGKLKNKYYERIATL-----PTL-----NDRFTKCF-LANNYVQVRRHKKCTWV--H 208
+ +G + + L PT DR K F L + + + W
Sbjct: 404 HVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKA 463
Query: 209 HVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGF 268
H V S D+T K+W +S + V H + A + +
Sbjct: 464 HDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVV-GVLRGHRRGVWACSFNPFSRQL 522
Query: 269 VYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSI 328
+GS D I++W V+ + VQTLE H A+ L + GT + S A D +
Sbjct: 523 A-SGSGDRTIRIWN-------VDTQQC-VQTLEGHTGAILKLIYISQGTQVVSAAADGLV 573
Query: 329 LVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLA--VVSNLLFSGSSDNTIRIWR 385
VW G + D+ H + LA +LL SG +D + +W+
Sbjct: 574 KVWSLSSGECVATLDN-------------HEDRVWALASRFDGSLLVSGGADAVVSVWK 619
Score = 46 (21.3 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 16/79 (20%), Positives = 31/79 (39%)
Query: 83 IAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVV--LGDKL 140
+ L +G N + A D + V + + + V G+ ++ L G L
Sbjct: 147 VISALCFGKHQNTWVLASGADDSR-VRLWDLN-SSRSMAVFEGHSSVIRGLTFEPTGSFL 204
Query: 141 FSAHQDHKIRVWKIDNNTS 159
S +D ++VW I ++
Sbjct: 205 LSGSRDKTVQVWNIKKRSA 223
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 125 (49.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 36/135 (26%), Positives = 66/135 (48%)
Query: 252 HDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALA 311
H A++++ S + + ++ + SAD IK+W + +T+ HK ++ +A
Sbjct: 18 HTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFE--------KTISGHKLGISDVA 68
Query: 312 LSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAILCLAV--VS 369
S+D +L S + D+++ +W+ G LK L+GH+ + C S
Sbjct: 69 WSSDSNLLVSASDDKTLKIWDVSSGK------------CLK-TLKGHSNYVFCCNFNPQS 115
Query: 370 NLLFSGSSDNTIRIW 384
NL+ SGS D ++RIW
Sbjct: 116 NLIVSGSFDESVRIW 130
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 40/175 (22%), Positives = 75/175 (42%)
Query: 231 DRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQV 290
D+T KIW S +CL+++K H + + + ++ + +GS D +++W
Sbjct: 82 DKTLKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSN-LIVSGSFDESVRIWDV------- 132
Query: 291 NKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMV 350
K ++TL H V+A+ + DG+++ S + D +W+ G + DD V
Sbjct: 133 -KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 191
Query: 351 LKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSS-----SVTDHQKGYSCL 400
+ K IL + DNT+++W S + T H+ C+
Sbjct: 192 SFVKFSPNGKYILAATL----------DNTLKLWDYSKGKCLKTYTGHKNEKYCI 236
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 115 (45.5 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 33/104 (31%), Positives = 54/104 (51%)
Query: 239 TSDFRCLESVKNAHDDAINAIVVSKSN-DGF--VYTGSADTKIKVWKKLRAALQVNKKHS 295
T+ + L + AHDDAI ++ K+ +G V +GS D +KVWK ++K
Sbjct: 2 TTQYGILFKQEQAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWK------WNDEKLD 55
Query: 296 LVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYI 339
L TLE H+ V ++ +S G++ S + D I +W+ + G I
Sbjct: 56 LQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQI 99
Score = 50 (22.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 24/70 (34%), Positives = 30/70 (42%)
Query: 360 KAILCLAVVSN--LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAVV 417
K IL +A + L SG+ D I I+ D G L LEGH P++ LT
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIF-------DIATG-KLLHTLEGHAMPIRSLTFSP 200
Query: 418 DSDYSNRNSD 427
DS SD
Sbjct: 201 DSQLLVTASD 210
>DICTYBASE|DDB_G0284471 [details] [associations]
symbol:kif8 "kinesin-4" species:44689 "Dictyostelium
discoideum" [GO:0007018 "microtubule-based movement" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003777 "microtubule
motor activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001752 InterPro:IPR015943
InterPro:IPR019821 Pfam:PF00225 Pfam:PF00400 PRINTS:PR00380
PROSITE:PS00411 PROSITE:PS50067 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00129 SMART:SM00320 dictyBase:DDB_G0284471 GO:GO:0005524
GO:GO:0005737 GO:GO:0005875 GO:GO:0051301 GO:GO:0007067
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 GO:GO:0003777
GO:GO:0007018 Gene3D:3.40.850.10 EMBL:AAFI02000066 HSSP:P33173
EMBL:AY484462 EMBL:U69985 RefSeq:XP_638546.1
ProteinModelPortal:Q6S003 EnsemblProtists:DDB0191403 GeneID:8624639
KEGG:ddi:DDB_G0284471 InParanoid:Q6S003 Uniprot:Q6S003
Length = 1873
Score = 135 (52.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 58/258 (22%), Positives = 111/258 (43%)
Query: 80 SLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVLGDK 139
S+++ K L GS + I ++RD ++V H D V S+ VL D
Sbjct: 1643 SMSVTSKYLVTGSRDHTINLFHRD--SFVLAQKLQPPHH---------DGVTSIAVLDDV 1691
Query: 140 LFSAHQDHKIRVWKIDN-NTSAYYSTSGKLKNKYYERIA--TLPTL-NDRFTKCFLANNY 195
++S +D I+ W + + N + N ++A T+P L N + NN
Sbjct: 1692 IYSGSRDRTIKRWDVSSINNLINNNGENNSNNLITTQLAQQTVPILSNTPSNSNLIINNN 1751
Query: 196 VQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDR-TFKIWRTSDFRCLESVKNAHDD 254
+ + + + +S D TF + + ++ + NAH+D
Sbjct: 1752 NNIINNNNNN-NNSSNNNKSSSAPSSTTSSLSSSLDNSTFSL--LNQYQQNRLLNNAHND 1808
Query: 255 AINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALST 314
+N + + ++G +++G D+ IK W L ++ +SL L H+S+++ L S
Sbjct: 1809 WVNCLCI---HNGMIFSGGKDSNIKGWDPLLSS------NSL---LLGHESSISCLTSSK 1856
Query: 315 DGTVLYSGACDRSILVWE 332
+ L+SG+ D+ I +W+
Sbjct: 1857 E--FLFSGSTDKCIKIWK 1872
Score = 96 (38.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 45/200 (22%), Positives = 75/200 (37%)
Query: 88 LYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDAVKSLVVLGDK--LFSAHQ 145
LY G S+ I+ W+ GD N++ + V+SL + G +FS
Sbjct: 1524 LYSGGSDKNIKLWD-----------LHTGD--NMLDLSSPGPVRSLCINGSSGCMFSGGA 1570
Query: 146 DHKIRVWKIDN--NTS-AYYSTSGKLKNKY-YERIATLPTLNDRFTKCFLANNYVQVRRH 201
+ ++VW I + NT+ + T + Y N F K + + + +
Sbjct: 1571 ERTVKVWDIRSPGNTNLCIFKTPSDVNCLVTYGNYVVSGLENGTF-KVWDIRHMQKPLKT 1629
Query: 202 KKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDAINAIVV 261
T HH T+ S D T ++ F + ++ H D + +I V
Sbjct: 1630 PLTTTPHHTGTIFSMSVTSKYLVTG--SRDHTINLFHRDSFVLAQKLQPPHHDGVTSIAV 1687
Query: 262 SKSNDGFVYTGSADTKIKVW 281
D +Y+GS D IK W
Sbjct: 1688 L---DDVIYSGSRDRTIKRW 1704
Score = 91 (37.1 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 21/89 (23%), Positives = 43/89 (48%)
Query: 250 NAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTA 309
N HD + +V+ + N +Y+G +D IK+W ++ +++ V +
Sbjct: 1505 NGHDGGLLTLVLDEQNPSTLYSGGSDKNIKLW-------DLHTGDNMLDL--SSPGPVRS 1555
Query: 310 LALSTDGTVLYSGACDRSILVWE-RDQGN 337
L ++ ++SG +R++ VW+ R GN
Sbjct: 1556 LCINGSSGCMFSGGAERTVKVWDIRSPGN 1584
Score = 84 (34.6 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 37/123 (30%), Positives = 56/123 (45%)
Query: 336 GNYIVDGDD-------DSGHMV--LKGALRG---HTKAILCLAVVSNLLFSGSSDNTIRI 383
GNY+V G + D HM LK L HT I ++V S L +GS D+TI +
Sbjct: 1603 GNYVVSGLENGTFKVWDIRHMQKPLKTPLTTTPHHTGTIFSMSVTSKYLVTGSRDHTINL 1662
Query: 384 WRRSSSVT------DHQKGYSCLAVLE-----GHR-RPVKCLTAVVDSDYSNRNSDHSST 431
+ R S V H G + +AVL+ G R R +K ++ N N +++S
Sbjct: 1663 FHRDSFVLAQKLQPPHHDGVTSIAVLDDVIYSGSRDRTIKRWDVSSINNLINNNGENNSN 1722
Query: 432 SFL 434
+ +
Sbjct: 1723 NLI 1725
Score = 80 (33.2 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 355 LRGHTKAILCLAVVSNLLFSGSSDNTIRIWR 385
L GH +I CL LFSGS+D I+IW+
Sbjct: 1842 LLGHESSISCLTSSKEFLFSGSTDKCIKIWK 1872
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 122 (48.0 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 36/115 (31%), Positives = 54/115 (46%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S D+ KIW C +S AHDD+I + S F+ + S D +IK W
Sbjct: 592 SADKNIKIWGLDYGDCHKSFF-AHDDSIMQVSFIPSTHHFI-SASKDKRIKYWDA----- 644
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGD 343
K +QT+E H V +LA+ + G SG+ DRSI ++ + + V+ D
Sbjct: 645 ---DKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIFNQTETPIFVESD 696
Score = 56 (24.8 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 26/105 (24%), Positives = 45/105 (42%)
Query: 66 SATLKVKGNSSYIPSLAIAGKL--LYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVV- 122
S +++G+ I S+ + + L S +G I+ W+ + + + T VG H N +
Sbjct: 134 SGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQ---TIVG-HRNPIW 189
Query: 123 -ATGNGDAVKSLVVLGDKLFSAHQDHKIRVWKIDNNTSAYYSTSG 166
N D + L S D++IR W+I +N SG
Sbjct: 190 GIDVNPDETR--------LCSCTSDNQIRFWRIPSNERQREDGSG 226
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 139 (54.0 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 38/117 (32%), Positives = 61/117 (52%)
Query: 297 VQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALR 356
++TL H V + +S G ++ SG+ DR++ VW+ D G + H L+
Sbjct: 1028 LRTLVGHTGGVWSSQMS--GNIIISGSTDRTLKVWDMDSGACV--------H-----TLQ 1072
Query: 357 GHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCL 413
GHT + C+ + + + SGS D T+R+W D ++G SCL VL GH V+C+
Sbjct: 1073 GHTSTVRCMHLHGSKVVSGSRDATLRVW-------DIEQG-SCLHVLVGHLAAVRCV 1121
Score = 127 (49.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 62/249 (24%), Positives = 105/249 (42%)
Query: 229 SWDRTFKIWRTSDFRCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAAL 288
S DRT K+W C+ +++ H + + + S V +GS D ++VW
Sbjct: 1052 STDRTLKVWDMDSGACVHTLQG-HTSTVRCMHLHGSK---VVSGSRDATLRVWDI----- 1102
Query: 289 QVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVW--ERDQ----------- 335
++ S + L H +AV + DG ++ SGA D + +W ER +
Sbjct: 1103 ---EQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNR 1157
Query: 336 -------GNYIVDGDDDSGHMV-------LKGALRGHTKAILCLAVVSNLLFSGSSDNTI 381
G ++V G D+ V K L GH + + N+L SG++D+T+
Sbjct: 1158 VYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNILVSGNADSTV 1217
Query: 382 RIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTAVVDSDYSNRNSDHSSTSFLVYSGSLD 441
++W +T Q CL L G P K +AV +++R F+V S D
Sbjct: 1218 KVW----DITTGQ----CLQTLSG---PNKHHSAVTCLQFNSR--------FVVTSSD-D 1257
Query: 442 CEIKIWQIR 450
+K+W ++
Sbjct: 1258 GTVKLWDVK 1266
Score = 54 (24.1 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 22/92 (23%), Positives = 40/92 (43%)
Query: 71 VKGNSSY-IPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVATGNGDA 129
+KG+ + I L +G + GS + ++ W+ + T VG H TG
Sbjct: 990 LKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLR---TLVG-H-----TGG--- 1037
Query: 130 VKSLVVLGDKLFSAHQDHKIRVWKIDNNTSAY 161
V S + G+ + S D ++VW +D+ +
Sbjct: 1038 VWSSQMSGNIIISGSTDRTLKVWDMDSGACVH 1069
Score = 38 (18.4 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 170 NKY-YERIATLPTLNDRFTKCFLANN 194
+KY Y+ ++T PT + ++T L+ +
Sbjct: 427 SKYTYKDLSTTPTSSRKYTNSRLSKS 452
>DICTYBASE|DDB_G0292834 [details] [associations]
symbol:DDB_G0292834 "cyclin-like F-box containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
dictyBase:DDB_G0292834 InterPro:IPR001480 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000197 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 PROSITE:PS50927 RefSeq:XP_629376.1
ProteinModelPortal:Q54CP0 STRING:Q54CP0 EnsemblProtists:DDB0237860
GeneID:8628894 KEGG:ddi:DDB_G0292834 OMA:HNEGIRA Uniprot:Q54CP0
Length = 569
Score = 129 (50.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 64/239 (26%), Positives = 100/239 (41%)
Query: 229 SWDRTFKIWRTSDFRCLESVK--NAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRA 286
S D T K+W ++ +S++ + ++ A+ + ND F S + + +
Sbjct: 332 SSDSTVKVWNIAEI-INDSIEIPDTEEEEEEALQDNVMNDPFAVNNSFTSLPDINEPDHV 390
Query: 287 ---ALQVNKK-------HSLVQTLE-KHKSAVTALALSTDGTVLYSGACDRSILVWERDQ 335
+ VN K H+L T KH+S VT L + G +L SG DR + VW+ +
Sbjct: 391 HTNIVSVNDKTSTRYRNHNLSSTHTFKHQSCVTCLQVY--GNILMSGGSDRVVRVWDLNT 448
Query: 336 GNYIVDGDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRIWRRSSSVTDHQK 395
I L GH + I L N+L +GS D T+R+W D +
Sbjct: 449 SQPIQ-------------ILSGHNEGIRALQFNGNVLVTGSDDTTVRVW-------DLRS 488
Query: 396 GYSCLAVLEGHRRPVKCL-----TAVVDS-DYS------NRNSDHSSTSFLVYSGSLDC 442
S ++ L GH V+CL T + S D S N +SD S F ++ S+ C
Sbjct: 489 KNSNISTLRGHNGSVRCLQWDGTTLITGSNDQSVRWWNLNYDSDQSKELFS-FNSSISC 546
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 84/345 (24%), Positives = 134/345 (38%)
Query: 64 QCSATLKVKGNSSYIPSLAIAGKLLYGGSSNGEIRAWNRDPNNYVNITSTDVGDHANVVA 123
+C TL G+ I L + ++ GS + IR W+ + I +T H
Sbjct: 264 KCRFTLA--GHYYPIQCLDVNNNIMATGSLDNSIRIWDLEKGKSKGILTTRA--H----- 314
Query: 124 TGNGDAVKSLVVLGDKLFSAHQDHKIRVWKIDNNTSAYYSTSGKLKNKYYERIATLP--T 181
N D V L +GD++ S D ++VW N + + S ++ + E L
Sbjct: 315 --NFD-VFCLQQIGDQIISGSSDSTVKVW----NIAEIINDSIEIPDTEEEEEEALQDNV 367
Query: 182 LNDRFTKCFLANNYVQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSD 241
+ND F + N++ + + VH + V S TFK S
Sbjct: 368 MNDPFA---VNNSFTSLPDINEPDHVH-TNIVSVNDKTSTRYRNHNLSSTHTFK--HQSC 421
Query: 242 FRCLESVKN----AHDDAINAI----------VVSKSNDGF---------VYTGSADTKI 278
CL+ N D + + ++S N+G + TGS DT +
Sbjct: 422 VTCLQVYGNILMSGGSDRVVRVWDLNTSQPIQILSGHNEGIRALQFNGNVLVTGSDDTTV 481
Query: 279 KVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNY 338
+VW LR+ K+S + TL H +V L DGT L +G+ D+S+ W NY
Sbjct: 482 RVWD-LRS------KNSNISTLRGHNGSVRCL--QWDGTTLITGSNDQSVRWWNL---NY 529
Query: 339 IVDGDDDSGHMVLKGALRGHTKAILCLAVVSNLLFSGSSDNTIRI 383
D D L +I CL +++L G SD+ ++I
Sbjct: 530 --DSDQSK-------ELFSFNSSISCLQFTNSILMCGLSDSKVQI 565
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 53/205 (25%), Positives = 89/205 (43%)
Query: 243 RCLESVKNAHDDAINAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEK 302
RC S++ H +A+ ++ S + ++ +GS DT ++ W L H T +
Sbjct: 105 RCTSSLEG-HSEAVISVAFSPTGK-YLASGSGDTTVRFWD-----LSTETPHF---TCQG 154
Query: 303 HKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALRGHTKAI 362
H+ V +++ S DG L SG + IL+W+ G + G AL GH+K I
Sbjct: 155 HRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQV-------GR-----ALAGHSKWI 202
Query: 363 LCLA---VVSN----LLFSGSSDNTIRIWRRSSSVTDHQKGYSCLAVLEGHRRPVKCLTA 415
L+ + +N + S S D ++R+W D G C +L GH + V CL
Sbjct: 203 TALSWEPLHANPECRYVASSSKDGSVRVW-------DTTAG-RCERILTGHTQSVTCLRW 254
Query: 416 VVDSDYSNRNSDHSSTSFLVYSGSL 440
D + + D + + + G L
Sbjct: 255 GGDGLLYSASQDRTIKVWRAHDGVL 279
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 123 (48.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 47/219 (21%), Positives = 93/219 (42%)
Query: 140 LFSAHQDHKIRVWKIDNNTS--AYYSTSGKLKNKYYERIAT--LPTLNDRFTKCFLANNY 195
L S+ +D +R+W + T Y + + + + + +DR + + ++Y
Sbjct: 556 LLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY 615
Query: 196 VQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDA 255
+R + H+ V S DRT ++W + C+ + H
Sbjct: 616 QPLR-----IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGP 669
Query: 256 INAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTD 315
I+++ S N F+ TG+ D ++ +W + L V + L+ H V +L S D
Sbjct: 670 IHSLTFSP-NGRFLATGATDGRVLLWD-IGHGLMVGE-------LKGHTDTVCSLRFSRD 720
Query: 316 GTVLYSGACDRSILVWERDQGNYIVDGDD---DSGHMVL 351
G +L SG+ D ++ +W+ + ++ DD +GH+ L
Sbjct: 721 GEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINL 759
Score = 118 (46.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 30/90 (33%), Positives = 45/90 (50%)
Query: 297 VQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALR 356
V+ HK + +L S +G L +GA D +L+W D GH ++ G L+
Sbjct: 660 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW-------------DIGHGLMVGELK 706
Query: 357 GHTKAILCLAVVSN--LLFSGSSDNTIRIW 384
GHT + L + +L SGS DNT+R+W
Sbjct: 707 GHTDTVCSLRFSRDGEILASGSMDNTVRLW 736
Score = 53 (23.7 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 105 NNYVNITSTDVGDHANVVATGNGDA-VKSLVVLGDKLFSAHQ 145
N Y +T+ DV D ++++A G D+ V+ V KL S Q
Sbjct: 466 NAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQ 507
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 123 (48.4 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 47/219 (21%), Positives = 93/219 (42%)
Query: 140 LFSAHQDHKIRVWKIDNNTS--AYYSTSGKLKNKYYERIAT--LPTLNDRFTKCFLANNY 195
L S+ +D +R+W + T Y + + + + + +DR + + ++Y
Sbjct: 558 LLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY 617
Query: 196 VQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDA 255
+R + H+ V S DRT ++W + C+ + H
Sbjct: 618 QPLR-----IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGP 671
Query: 256 INAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTD 315
I+++ S N F+ TG+ D ++ +W + L V + L+ H V +L S D
Sbjct: 672 IHSLTFSP-NGRFLATGATDGRVLLWD-IGHGLMVGE-------LKGHTDTVCSLRFSRD 722
Query: 316 GTVLYSGACDRSILVWERDQGNYIVDGDD---DSGHMVL 351
G +L SG+ D ++ +W+ + ++ DD +GH+ L
Sbjct: 723 GEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINL 761
Score = 118 (46.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 30/90 (33%), Positives = 45/90 (50%)
Query: 297 VQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALR 356
V+ HK + +L S +G L +GA D +L+W D GH ++ G L+
Sbjct: 662 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW-------------DIGHGLMVGELK 708
Query: 357 GHTKAILCLAVVSN--LLFSGSSDNTIRIW 384
GHT + L + +L SGS DNT+R+W
Sbjct: 709 GHTDTVCSLRFSRDGEILASGSMDNTVRLW 738
Score = 53 (23.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 105 NNYVNITSTDVGDHANVVATGNGDA-VKSLVVLGDKLFSAHQ 145
N Y +T+ DV D ++++A G D+ V+ V KL S Q
Sbjct: 468 NAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQ 509
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 123 (48.4 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 47/219 (21%), Positives = 93/219 (42%)
Query: 140 LFSAHQDHKIRVWKIDNNTS--AYYSTSGKLKNKYYERIAT--LPTLNDRFTKCFLANNY 195
L S+ +D +R+W + T Y + + + + + +DR + + ++Y
Sbjct: 559 LLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY 618
Query: 196 VQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDA 255
+R + H+ V S DRT ++W + C+ + H
Sbjct: 619 QPLR-----IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGP 672
Query: 256 INAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTD 315
I+++ S N F+ TG+ D ++ +W + L V + L+ H V +L S D
Sbjct: 673 IHSLTFSP-NGRFLATGATDGRVLLWD-IGHGLMVGE-------LKGHTDTVCSLRFSRD 723
Query: 316 GTVLYSGACDRSILVWERDQGNYIVDGDD---DSGHMVL 351
G +L SG+ D ++ +W+ + ++ DD +GH+ L
Sbjct: 724 GEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINL 762
Score = 118 (46.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 30/90 (33%), Positives = 45/90 (50%)
Query: 297 VQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALR 356
V+ HK + +L S +G L +GA D +L+W D GH ++ G L+
Sbjct: 663 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW-------------DIGHGLMVGELK 709
Query: 357 GHTKAILCLAVVSN--LLFSGSSDNTIRIW 384
GHT + L + +L SGS DNT+R+W
Sbjct: 710 GHTDTVCSLRFSRDGEILASGSMDNTVRLW 739
Score = 53 (23.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 105 NNYVNITSTDVGDHANVVATGNGDA-VKSLVVLGDKLFSAHQ 145
N Y +T+ DV D ++++A G D+ V+ V KL S Q
Sbjct: 469 NAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQ 510
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 123 (48.4 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 47/219 (21%), Positives = 93/219 (42%)
Query: 140 LFSAHQDHKIRVWKIDNNTS--AYYSTSGKLKNKYYERIAT--LPTLNDRFTKCFLANNY 195
L S+ +D +R+W + T Y + + + + + +DR + + ++Y
Sbjct: 559 LLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY 618
Query: 196 VQVRRHKKCTWVHHVDTVXXXXXXXXXXXXXXTSWDRTFKIWRTSDFRCLESVKNAHDDA 255
+R + H+ V S DRT ++W + C+ + H
Sbjct: 619 QPLR-----IFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVR-IFTGHKGP 672
Query: 256 INAIVVSKSNDGFVYTGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTD 315
I+++ S N F+ TG+ D ++ +W + L V + L+ H V +L S D
Sbjct: 673 IHSLTFSP-NGRFLATGATDGRVLLWD-IGHGLMVGE-------LKGHTDTVCSLRFSRD 723
Query: 316 GTVLYSGACDRSILVWERDQGNYIVDGDD---DSGHMVL 351
G +L SG+ D ++ +W+ + ++ DD +GH+ L
Sbjct: 724 GEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINL 762
Score = 118 (46.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 30/90 (33%), Positives = 45/90 (50%)
Query: 297 VQTLEKHKSAVTALALSTDGTVLYSGACDRSILVWERDQGNYIVDGDDDSGHMVLKGALR 356
V+ HK + +L S +G L +GA D +L+W D GH ++ G L+
Sbjct: 663 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW-------------DIGHGLMVGELK 709
Query: 357 GHTKAILCLAVVSN--LLFSGSSDNTIRIW 384
GHT + L + +L SGS DNT+R+W
Sbjct: 710 GHTDTVCSLRFSRDGEILASGSMDNTVRLW 739
Score = 53 (23.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 105 NNYVNITSTDVGDHANVVATGNGDA-VKSLVVLGDKLFSAHQ 145
N Y +T+ DV D ++++A G D+ V+ V KL S Q
Sbjct: 469 NAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQ 510
>UNIPROTKB|A5D9H4 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9913 "Bos taurus" [GO:0033186 "CAF-1 complex" evidence=IEA]
[GO:0031497 "chromatin assembly" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005829 GO:GO:0005813 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 HOGENOM:HOG000183312 KO:K10751
OMA:VYDICWT CTD:8208 OrthoDB:EOG4G4GQD PRINTS:PR00319
HOVERGEN:HBG050780 EMBL:DAAA02003568 EMBL:BT030593 IPI:IPI00852539
RefSeq:NP_001091483.1 UniGene:Bt.24966 STRING:A5D9H4
Ensembl:ENSBTAT00000015764 GeneID:511654 KEGG:bta:511654
InParanoid:A5D9H4 NextBio:20870035 Uniprot:A5D9H4
Length = 575
Score = 128 (50.1 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 40/142 (28%), Positives = 63/142 (44%)
Query: 271 TGSADTKIKVWKKLRAALQVNKKHSLVQTLEKHKSAVTALALSTDGTVLYSGACDRSILV 330
+ DT ++VWK + + L +H AV + S +G +L SG D IL+
Sbjct: 34 SAGVDTAVRVWK-VEKGPDGKAIVEFLSNLARHTKAVNVVRFSPNGEILASGGDDAVILL 92
Query: 331 W---ERDQGNYIVDGDDDSGHM------VLKGALRGHTKAI--LCLAVVSNLLFSGSSDN 379
W + + + D+D + V+K LRGH + + +C A NL+ S S DN
Sbjct: 93 WKVNDNKEPEQVAFQDEDEAQLNKENWTVVK-TLRGHLEDVYDICWATDGNLMASASVDN 151
Query: 380 TIRIWRRSS----SVTDHQKGY 397
T +W S S+ + K Y
Sbjct: 152 TAIMWDVSKGQKISIFNEHKSY 173
Score = 44 (20.5 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 139 KLFSAHQDHKIRVWKID 155
+L SA D +RVWK++
Sbjct: 31 RLASAGVDTAVRVWKVE 47
WARNING: HSPs involving 183 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 450 409 0.00079 118 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 433
No. of states in DFA: 622 (66 KB)
Total size of DFA: 291 KB (2149 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.47u 0.10s 33.57t Elapsed: 00:00:02
Total cpu time: 33.55u 0.11s 33.66t Elapsed: 00:00:02
Start: Fri May 10 07:41:29 2013 End: Fri May 10 07:41:31 2013
WARNINGS ISSUED: 2