BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>041329
MAKSESPDIEVGNMYFCYADHFPGRILSMCKLSSVVKAIEEKLTKRQLSMLKNDIFGHFL
ECQSFSFSRVILHNLLLRQVAHEEDSREDQLWFQIGEHLIRLSIVEWCLVTGLSFGVDTK
RKIDEMEERLRNTYFGGVHRKINVNEFDAVFKELKFEEMDDMDALKIALFYFADIVLNAR
NNHCQINFDWLDEVDDIEYFRKCPWGLLSWKMIYESLDNALFEKDEKFKRTRLKNPDHNI
EKYNLYGFTSGVQVFLNQLWNNGDCAVDSLVFDDRLNSYLCGRQHTMSKSMTDVDMPLEV
IFPRWLEYVGFYNIRPELRSADPWKVIAVKSAPQQEPGTGDCGVFVLMVTMYLMFGLRLE
FNASHVEYFRKKIAVDIFNDDIVL

High Scoring Gene Products

Symbol, full name Information P value
AT1G31150 protein from Arabidopsis thaliana 6.6e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041329
        (384 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2029549 - symbol:AT1G31150 species:3702 "Arabi...   155  6.6e-08   1


>TAIR|locus:2029549 [details] [associations]
            symbol:AT1G31150 species:3702 "Arabidopsis thaliana"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007020 "microtubule nucleation" evidence=RCA]
            InterPro:IPR002487 Pfam:PF01486 PROSITE:PS51297 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 EMBL:AC004793
            InterPro:IPR015410 Pfam:PF09331 IPI:IPI00521034 PIR:B86437
            RefSeq:NP_174400.1 UniGene:At.11080 PRIDE:Q9SA08
            EnsemblPlants:AT1G31150.1 GeneID:840000 KEGG:ath:AT1G31150
            TAIR:At1g31150 eggNOG:NOG271629 PhylomeDB:Q9SA08
            ProtClustDB:CLSN2914161 Genevestigator:Q9SA08 Uniprot:Q9SA08
        Length = 673

 Score = 155 (59.6 bits), Expect = 6.6e-08, P = 6.6e-08
 Identities = 54/198 (27%), Positives = 93/198 (46%)

Query:    17 CYADHFPGRILSMCK-LSSVVKAIEEKLTKRQLSMLKNDIFGHFLE--CQSFSFSRVILH 73
             CY D     I S  + L ++   ++      +   +K+  FG   E      S S  ++H
Sbjct:    20 CYPDKARLNIYSRPEYLGTIANLLKGS---EEWERIKSSQFGKLFEFPVARCSHSGKLIH 76

Query:    74 NLLLRQVAHEEDSREDQLWFQIGEHLIRLSIVEWCLVTGLSFGV-----DTKRKIDEMEE 128
              LL RQV  +   ++ +LWF  G H IR SI E+ +VTGL  G      + K+  D    
Sbjct:    77 GLLSRQVVTK---KKHELWFVFGGHPIRFSIREFHIVTGLRCGKLPTEDEVKKHQDSKYL 133

Query:   129 RLRNTYFGGVHRKINVNEFDAVFKELKFEEMDDMDALKIALFYFADIVLNARNNHCQINF 188
              + N  FG   R + + +   V + L+ +++     L +AL    D V+   N+   +  
Sbjct:   134 SVWNRLFGE-KRMVTIGD---VLEMLQKKKLSSWKKLCLALIVIVDGVVVC-NDQSFVTL 188

Query:   189 DWLDEVDDIEYFRKCPWG 206
             D+++ ++DI++F + PWG
Sbjct:   189 DFVEMLNDIDFFLEYPWG 206


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.140   0.437    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      384       384   0.00091  117 3  11 22  0.47    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  623 (66 KB)
  Total size of DFA:  285 KB (2148 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  33.15u 0.11s 33.26t   Elapsed:  00:00:02
  Total cpu time:  33.15u 0.11s 33.26t   Elapsed:  00:00:02
  Start:  Fri May 10 07:56:29 2013   End:  Fri May 10 07:56:31 2013

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