Query 041332
Match_columns 753
No_of_seqs 198 out of 768
Neff 5.0
Searched_HMMs 46136
Date Fri Mar 29 06:03:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041332.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041332hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00148 potassium transporter 100.0 3E-242 5E-247 2049.1 65.7 745 6-753 1-785 (785)
2 PLN00149 potassium transporter 100.0 7E-240 1E-244 2031.3 66.2 746 6-753 1-779 (779)
3 PLN00151 potassium transporter 100.0 9E-240 2E-244 2025.5 65.6 746 5-753 78-852 (852)
4 PLN00150 potassium ion transpo 100.0 3E-239 7E-244 2022.2 66.1 741 6-753 25-779 (779)
5 TIGR00794 kup potassium uptake 100.0 3E-230 6E-235 1941.5 60.5 687 28-753 1-688 (688)
6 PRK10745 trkD potassium transp 100.0 6E-219 1E-223 1824.4 54.3 609 27-753 11-622 (622)
7 COG3158 Kup K+ transporter [In 100.0 7E-212 2E-216 1726.2 51.9 612 24-753 14-627 (627)
8 PF02705 K_trans: K+ potassium 100.0 1E-200 3E-205 1664.0 43.4 534 29-603 1-534 (534)
9 TIGR00911 2A0308 L-type amino 93.2 0.27 5.8E-06 56.5 8.3 101 199-303 166-272 (501)
10 PF13520 AA_permease_2: Amino 81.3 9.3 0.0002 42.5 10.2 251 172-438 89-369 (426)
11 COG0531 PotE Amino acid transp 80.7 16 0.00036 40.7 11.9 177 197-379 133-324 (466)
12 PRK15049 L-asparagine permease 80.6 19 0.00041 41.8 12.7 175 201-380 147-342 (499)
13 TIGR00909 2A0306 amino acid tr 79.7 9 0.0002 42.8 9.4 167 200-379 135-316 (429)
14 TIGR03813 put_Glu_GABA_T putat 78.5 28 0.00061 39.9 13.1 121 201-326 126-254 (474)
15 PRK10435 cadB lysine/cadaverin 78.3 41 0.00089 38.1 14.2 23 201-223 124-146 (435)
16 TIGR00907 2A0304 amino acid pe 74.5 22 0.00047 40.8 10.8 25 199-223 144-168 (482)
17 TIGR00930 2a30 K-Cl cotranspor 73.6 83 0.0018 40.0 16.2 25 198-222 203-227 (953)
18 TIGR03810 arg_ornith_anti argi 68.5 74 0.0016 36.4 13.3 45 336-380 273-317 (468)
19 PRK10655 potE putrescine trans 66.7 80 0.0017 35.6 13.0 43 200-242 125-170 (438)
20 PRK11021 putative transporter; 60.2 1.4E+02 0.0031 33.4 13.4 172 198-380 115-299 (410)
21 PRK10249 phenylalanine transpo 58.8 84 0.0018 36.0 11.4 114 201-317 138-259 (458)
22 PRK10746 putative transport pr 57.2 1.8E+02 0.0039 33.5 13.7 30 18-53 10-39 (461)
23 TIGR00906 2A0303 cationic amin 53.9 2.1E+02 0.0045 34.0 13.9 45 198-242 161-208 (557)
24 TIGR00908 2A0305 ethanolamine 52.8 1E+02 0.0022 34.9 10.7 24 200-223 123-146 (442)
25 PRK10580 proY putative proline 52.3 1.2E+02 0.0026 34.6 11.3 25 477-501 423-447 (457)
26 TIGR00905 2A0302 transporter, 51.1 1E+02 0.0022 35.4 10.5 43 337-379 278-320 (473)
27 PRK10238 aromatic amino acid t 51.0 1.1E+02 0.0024 34.9 10.8 115 201-319 129-252 (456)
28 PF06570 DUF1129: Protein of u 50.9 48 0.001 34.2 7.1 21 478-498 179-199 (206)
29 TIGR00910 2A0307_GadC glutamat 50.1 2.8E+02 0.0061 32.4 14.0 46 276-321 202-249 (507)
30 PRK10644 arginine:agmatin anti 48.7 1.3E+02 0.0028 34.1 10.8 23 201-223 128-150 (445)
31 PRK11357 frlA putative fructos 47.5 1.5E+02 0.0031 33.7 10.9 44 200-243 129-175 (445)
32 PF14362 DUF4407: Domain of un 46.3 95 0.0021 33.6 8.9 54 417-470 12-69 (301)
33 TIGR01773 GABAperm gamma-amino 43.1 4.9E+02 0.011 29.6 14.3 176 200-379 128-323 (452)
34 COG4059 MtrE Tetrahydromethano 41.3 22 0.00047 37.7 2.8 32 474-505 257-288 (304)
35 PRK11049 D-alanine/D-serine/gl 37.9 1.8E+02 0.004 33.3 9.9 106 273-379 216-332 (469)
36 KOG3145 Cystine transporter Cy 37.0 61 0.0013 36.0 5.4 37 264-301 288-341 (372)
37 TIGR00913 2A0310 amino acid pe 36.3 3.9E+02 0.0084 30.6 12.2 102 277-379 206-327 (478)
38 PRK11387 S-methylmethionine tr 34.7 6.6E+02 0.014 28.8 13.7 21 202-222 133-153 (471)
39 KOG4742 Predicted chitinase [G 32.3 21 0.00045 39.1 1.1 34 290-332 171-210 (286)
40 KOG3643 GABA receptor [Signal 28.8 46 0.00099 38.6 3.0 105 358-466 209-324 (459)
41 KOG3788 Predicted divalent cat 23.9 6.1E+02 0.013 29.6 10.5 125 353-490 112-261 (441)
42 TIGR03428 ureacarb_perm permea 23.1 1.2E+03 0.025 26.8 16.3 25 199-223 145-169 (475)
43 PF05545 FixQ: Cbb3-type cytoc 22.2 72 0.0016 25.6 2.2 29 487-515 19-47 (49)
44 PRK13108 prolipoprotein diacyl 20.8 84 0.0018 36.8 3.3 107 199-316 28-141 (460)
45 PF04725 PsbR: Photosystem II 20.3 77 0.0017 29.4 2.2 36 41-82 49-84 (99)
No 1
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=2.5e-242 Score=2049.08 Aligned_cols=745 Identities=61% Similarity=1.055 Sum_probs=684.8
Q ss_pred cccccccccc-ccccccHhH---HHHHHHhhcceeecccCcchhHHHHhhccCCCCCCCCchhhhhhhHHHHHHHHHHHh
Q 041332 6 EFLEQGISQQ-NFKRVSCTT---VVSLAYQSLGVVYGDLSTSPLYVYKTAFSGKLSLHENDEEIYGVLSFIFWTFTLIAL 81 (753)
Q Consensus 6 ~~~~~~~~~~-~~~~~~w~~---~~~La~~alGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~liv~ 81 (753)
||.|+|.++. +++..+|++ ++.|++||||||||||||||||||+++|+++++.+++++||+|+|||||||||||++
T Consensus 1 ~~~~~~~~~~~~~~~~~w~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~~~~~~~~~~~ilGvLSLIfWtLtLiv~ 80 (785)
T PLN00148 1 MEAESGVSPSRNPSQLSWVNLSRNLLLAYQSFGVVYGDLSTSPLYVYKSTFSGKLQKHQNEETIFGAFSLIFWTFTLIPL 80 (785)
T ss_pred CCcccCCCCCCCCCcchhhHHhHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHHHhHHHHHHHHHHHHHH
Confidence 7999998754 455668988 789999999999999999999999999987666678999999999999999999999
Q ss_pred hheeeEEEEecCCCCchHHhHHHHHhcccccccCCCCccchhhhcccccCCCCccccchhhHHHhhhccchhhHHHHHHH
Q 041332 82 LKYVFVVMSADDNGEGGTVALYSLLCRHARLSTLPNQQATDEKLSSYATDGSADTWQSSGLKALFEKHQRFSNMLLIFVL 161 (753)
Q Consensus 82 iKYv~ivlradn~GEGGi~AL~sL~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~l~l 161 (753)
+|||+|||||||||||||||||||+||++|++++||||..|+++++|+++.+..++.++++|++||+|++.|.+++++|+
T Consensus 81 iKYV~ivlrAdn~GEGG~fALysLl~r~~~~~~~pn~~~~d~~ls~~~~~~~~~~~~~~~~k~~lE~~~~~~~~ll~l~l 160 (785)
T PLN00148 81 LKYVTILLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSTQTVGSSPLKRFLEKHKRLRTALLLVVL 160 (785)
T ss_pred HhheEEEEEecCCCCchHHHHHHHHHHhcccccCccchhhhhhhhhhccCccccchhhhHHHHHhhhchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999887765567778899999999999999999999
Q ss_pred HhhhhhccCccccchhhhhhhcccceeecccCCcceEeehhHHHHHHHHhhhhccccchhhhhhhHHHHHHHHHHHHHHH
Q 041332 162 LGTSMAIGDGVLTPTISVLSAVSGVQVKIRELHENYVVLISCVILVGLFSLQHHGTHRVAFIFAPIVTTWLLCISSIGIY 241 (753)
Q Consensus 162 ~G~al~~gDgviTPAISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIml~WF~~l~~~Gi~ 241 (753)
+|+||+||||+||||||||||||||++..|++++++|+||||+||++||++||+||+|||++|||||++||++|+++|+|
T Consensus 161 ~G~am~~gDgvlTPAISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGiy 240 (785)
T PLN00148 161 FGACMVIGDGVLTPAISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLY 240 (785)
T ss_pred HHHHHHHhccccchhHHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888999999999999999999999999999999999999999999999
Q ss_pred hhcccCcceeeecCHHHHHHHHHhcCcceeeeecceeeeecchhhhhccCCCCCccchhhhhhHhHHHHHHHhhcchhhH
Q 041332 242 NIFQWNPHIFNALSPVYMLKFFRSTGIDGWISLGGVVLSITGVETMFADLGHFSSLSIKVAFTFLVYPCLILAYMGEAAF 321 (753)
Q Consensus 242 ~I~~~~P~Vl~AlnP~yai~f~~~~~~~g~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~PaL~LnY~GQgA~ 321 (753)
||++|||+||+|+||+|+++||.+||..||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+|||||
T Consensus 241 ni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ 320 (785)
T PLN00148 241 NIIHWNPKIIHALSPYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAF 320 (785)
T ss_pred HHHhcCHHHhhhcCHHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCcCcccCcccccccccchHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHhcCCCccceEEecCCccCCceeehhhHHH
Q 041332 322 LTKHHEDIQRSFYKAIPEAVFWPVFIVATFAAIVGSQAVISATFSIISQCCALNCFPSVKIIHTSSKIYGQIYIPEVNWM 401 (753)
Q Consensus 322 ll~~p~~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~ 401 (753)
|++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+
T Consensus 321 ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~ 400 (785)
T PLN00148 321 LSKNIPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWI 400 (785)
T ss_pred HhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhheeeEeecCchhhhhhhheeehhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhccccCCccH
Q 041332 402 LMCLCLAVTIGLRDTNMIGHAYGLAVTTVMLVTTCLMGQVMITVWKQRIFIVVAFLLFFGSVELLYISACVYKIPEGGWI 481 (753)
Q Consensus 402 Lmi~~i~vv~~F~~S~~la~AYGiAVt~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~an~~Ki~~GGW~ 481 (753)
||++|+++|++||||++||+|||+||++||++||+|+++||+.+||||++++++|+++|+++|++||+||+.||+||||+
T Consensus 401 Lmv~~i~vv~~F~~s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~ 480 (785)
T PLN00148 401 LMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWV 480 (785)
T ss_pred HHHHHHHhheeeccchhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHhhhhhcCCChhhHHhcCCCCCCccccceEEEEeCCCCCchhhhHhhhhcCCccceeE
Q 041332 482 PLVLSFIFMAVMYIWNYGTMKKHDFDMENKVSMDSIVALGPSLGMVRVPGIGLVYTNLATGVPAIFGHFVTNLPAFHQVL 561 (753)
Q Consensus 482 pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~v 561 (753)
||++|++++++|++||||++++++++.++++++++|.++.++.++.||||+|+|||++.+++|++|.||++|||++||++
T Consensus 481 pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe~~ 560 (785)
T PLN00148 481 PLVLSAIFMSIMYIWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVL 560 (785)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceE
Confidence 99999999999999999999999999999999999988877777889999999999999999999999999999999999
Q ss_pred EEEEEEEecccccCCCceEEEEEeccCCccEEEEEEEEeeeccCCchHhHHHHHHHHHHHHHhhccccccc----cc--c
Q 041332 562 VFVCIKSVQVPHVSENERLLISRVGLKEYGMFRCIVRYGYKDLQQENYDFENTLVSAIVQFVETEGEDESS----RE--A 635 (753)
Q Consensus 562 vfl~i~~~~vP~V~~~eR~~v~~l~~~~~g~~rv~~ryGf~e~~~~~~~l~~~lv~~L~~fI~~e~~~~~~----~~--~ 635 (753)
||+||+++|+|+||++||+++++++++++++|||++||||||..+.+++||++|+++|++|||+|+.+.+. ++ |
T Consensus 561 Vfv~ik~~~vP~V~~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~~ 640 (785)
T PLN00148 561 VFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEFIQMEAEEPQSSASESSSND 640 (785)
T ss_pred EEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcccccchHHHHHHHHHHHHHHHhhhhccccccccccccc
Confidence 99999999999999999999999999888899999999999998889999999999999999998854210 11 1
Q ss_pred CCcccccccCCCCCCC-----------------CCCccccccc--ccCCccccCC-CCCCCC----------ccchhHhH
Q 041332 636 GDMDIEVLHAPEHPVK-----------------NSNCNEKLKQ--SSYGTQVTKS-GIRHPE----------NFMLKDES 685 (753)
Q Consensus 636 ~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~--~~~~~~~s~~-~~~~~~----------~~~~~~El 685 (753)
+++ +..+.+..... ++....+.+. +..+. ++++ ..+++. +.++++|+
T Consensus 641 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~El 717 (785)
T PLN00148 641 GRM--AVISTRDVQSSSLLMVSEQELADIDDSIQSSKSLTLQSLQSAYED-ENPGQSRRRRVRFQLPENPGMDPSVREEL 717 (785)
T ss_pred ccc--ccccccccccccccccccccccccccccccccccccccccccccc-cccccccccceeecccccccccchHHHHH
Confidence 111 11111110000 0000000000 00000 0111 111122 22579999
Q ss_pred HHHHHhhhcCcEEEEeeceEeecCCchhHHHHhHHHHHHHHHhhccCCcccccCCCCCEEEEeeEEEC
Q 041332 686 LEILKAKESGVAYIIGHSYAKAKKSSTILKKFAINVVYAFLSKNFREPEVGLNVPHASLLEVGMIYYV 753 (753)
Q Consensus 686 ~~l~~A~e~~~sYflGr~~v~a~~~s~~~kklvin~lF~fL~rNar~~~~~f~IP~~rvVEVG~~y~i 753 (753)
+++++|+|+|++|++||++++++++|+|+||++||++|.|||||||++...|+|||+|++||||+|||
T Consensus 718 ~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 718 MDLIEAKEAGVAYIMGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred HHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999997
No 2
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=6.6e-240 Score=2031.34 Aligned_cols=746 Identities=57% Similarity=1.010 Sum_probs=677.2
Q ss_pred ccccccccccccccccHhHHHHHHHhhcceeecccCcchhHHHHhhccCCCCCCCCchhhhhhhHHHHHHHHHHHhhhee
Q 041332 6 EFLEQGISQQNFKRVSCTTVVSLAYQSLGVVYGDLSTSPLYVYKTAFSGKLSLHENDEEIYGVLSFIFWTFTLIALLKYV 85 (753)
Q Consensus 6 ~~~~~~~~~~~~~~~~w~~~~~La~~alGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~liv~iKYv 85 (753)
||+|+|..+...++.+|+.++.|++||||||||||||||||||+++|+++++..++++||+|+||||||||||++++|||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~~~ilGvLSLIfWtL~Liv~iKYv 80 (779)
T PLN00149 1 MDLEGGSPQNHVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIFGVLSFVFWTLTLIPLLKYV 80 (779)
T ss_pred CCcccCccccccccccHHHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHhhhHHHHHHHHHHHHHhhhhE
Confidence 79999986655667899998999999999999999999999999999876666789999999999999999999999999
Q ss_pred eEEEEecCCCCchHHhHHHHHhcccccccCCCCccchhhhcccccCCC----CccccchhhHHHhhhccchhhHHHHHHH
Q 041332 86 FVVMSADDNGEGGTVALYSLLCRHARLSTLPNQQATDEKLSSYATDGS----ADTWQSSGLKALFEKHQRFSNMLLIFVL 161 (753)
Q Consensus 86 ~ivlradn~GEGGi~AL~sL~~r~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~l~~l~l 161 (753)
+|||||||||||||||||||+||++|..++||||++|+++++|+++.+ ++.+++.++|++||+++..|++++++|+
T Consensus 81 ~ivlrAdn~GEGGtfALysLl~r~~~~~l~pn~~~~d~~ls~~~~~~~~~~~~~~~~~~~~k~~le~~~~~~~~ll~l~l 160 (779)
T PLN00149 81 FIVLRADDNGEGGTFALYSLLCRHARVNSLPNCQLADEELSEYKKDSGSSSMPLSGFGSSLKSTLEKHRVLQRFLLVLAL 160 (779)
T ss_pred EEEEEecCCCCchHHHHHHHHHHhccccCCccccchhhhhhhhhccccccccccchhhhHHHHHHhhhhHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988753 2234568899999999989999999999
Q ss_pred HhhhhhccCccccchhhhhhhcccceeecccCCcceE-eehhHHHHHHHHhhhhccccchhhhhhhHHHHHHHHHHHHHH
Q 041332 162 LGTSMAIGDGVLTPTISVLSAVSGVQVKIRELHENYV-VLISCVILVGLFSLQHHGTHRVAFIFAPIVTTWLLCISSIGI 240 (753)
Q Consensus 162 ~G~al~~gDgviTPAISVLSAVeGl~v~~p~~~~~~v-v~is~~ILv~LF~iQ~~GT~kvg~~FgPIml~WF~~l~~~Gi 240 (753)
+|+||+|||||||||||||||||||++..|...++++ +||||+||++||++||+||+|||++|||||++||++||++|+
T Consensus 161 ~G~~m~igDgvlTPAISVLSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~~iGi 240 (779)
T PLN00149 161 IGTCMVIGDGVLTPAISVFSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAIGV 240 (779)
T ss_pred HHHHHHHhccccchhHHHHHHhhcccccCCCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999966434355 999999999999999999999999999999999999999999
Q ss_pred HhhcccCcceeeecCHHHHHHHHHhcCcceeeeecceeeeecchhhhhccCCCCCccchhhhhhHhHHHHHHHhhcchhh
Q 041332 241 YNIFQWNPHIFNALSPVYMLKFFRSTGIDGWISLGGVVLSITGVETMFADLGHFSSLSIKVAFTFLVYPCLILAYMGEAA 320 (753)
Q Consensus 241 ~~I~~~~P~Vl~AlnP~yai~f~~~~~~~g~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~PaL~LnY~GQgA 320 (753)
|||++|||+||+|+||+|+++||.+||..||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||
T Consensus 241 yni~~~~p~Vl~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~GQaA 320 (779)
T PLN00149 241 YNIFHWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAA 320 (779)
T ss_pred HHHHhcCHhHhhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCcC---cccCcccccccccchHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHhcCCCccceEEecCCccCCceeehh
Q 041332 321 FLTKHHE---DIQRSFYKAIPEAVFWPVFIVATFAAIVGSQAVISATFSIISQCCALNCFPSVKIIHTSSKIYGQIYIPE 397 (753)
Q Consensus 321 ~ll~~p~---~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~ 397 (753)
||++||+ +.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+
T Consensus 321 ~l~~~p~~~~~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIYIP~ 400 (779)
T PLN00149 321 YLSKHHVIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPE 400 (779)
T ss_pred HHhcCcchhccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHH
Confidence 9999997 4566999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhheeeEeecCchhhhhhhheeehhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhccccC
Q 041332 398 VNWMLMCLCLAVTIGLRDTNMIGHAYGLAVTTVMLVTTCLMGQVMITVWKQRIFIVVAFLLFFGSVELLYISACVYKIPE 477 (753)
Q Consensus 398 vNw~Lmi~~i~vv~~F~~S~~la~AYGiAVt~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~an~~Ki~~ 477 (753)
|||+||++|+++|++||||++||||||+||++||++||+|+++||+.+|+||++++++|+++|+++|++|||||+.||+|
T Consensus 401 vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~ 480 (779)
T PLN00149 401 INWTLMLLCLAVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFLE 480 (779)
T ss_pred HHHHHHHHHHhheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHhhhhhhhhhhHHHHHhhhhhcCCChhhHHhcCCCCCCccccceEEEEeCCCCCchhhhHhhhhcCCcc
Q 041332 478 GGWIPLVLSFIFMAVMYIWNYGTMKKHDFDMENKVSMDSIVALGPSLGMVRVPGIGLVYTNLATGVPAIFGHFVTNLPAF 557 (753)
Q Consensus 478 GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h~l~~~~~l 557 (753)
|||+||++|++++++|++||||++++++++.++++|++++.++.++.++.||||+|+|||++.+++|++|.||++|||++
T Consensus 481 GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~~~~l 560 (779)
T PLN00149 481 GAWVPIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAF 560 (779)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHhCCcc
Confidence 99999999999999999999999999999999999999998888777788999999999999999999999999999999
Q ss_pred ceeEEEEEEEEecccccCCCceEEEEEeccCCccEEEEEEEEeeeccCCchHhHHHHHHHHHHHHHhhccccccccc---
Q 041332 558 HQVLVFVCIKSVQVPHVSENERLLISRVGLKEYGMFRCIVRYGYKDLQQENYDFENTLVSAIVQFVETEGEDESSRE--- 634 (753)
Q Consensus 558 he~vvfl~i~~~~vP~V~~~eR~~v~~l~~~~~g~~rv~~ryGf~e~~~~~~~l~~~lv~~L~~fI~~e~~~~~~~~--- 634 (753)
||++||+|||++|+|+||++||+++++++++++++|||++||||||....+++||++|+++|++|||+|+.+...++
T Consensus 561 he~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d~~dFE~~Lve~L~~FI~~e~~~~~~~~~~~ 640 (779)
T PLN00149 561 HQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSEKPEPNGAPENE 640 (779)
T ss_pred cceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEeeccccccchHHHHHHHHHHHHHHHhhhhccccccccc
Confidence 99999999999999999999999999999988889999999999999888999999999999999999874322111
Q ss_pred ---cCCcccccccCCCCCCCCC-----------Ccc-cccccccCCccccCC--C-----CCCCCccchhHhHHHHHHhh
Q 041332 635 ---AGDMDIEVLHAPEHPVKNS-----------NCN-EKLKQSSYGTQVTKS--G-----IRHPENFMLKDESLEILKAK 692 (753)
Q Consensus 635 ---~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~~~~s~~--~-----~~~~~~~~~~~El~~l~~A~ 692 (753)
|+++ +..+..+.+.++. +.. .+.....+.+++++. . .....+.+++||++++++|+
T Consensus 641 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~ 718 (779)
T PLN00149 641 EGEDERM--TVVGTCSTHLEGIQLREDDSDKQEPAGTSELREIRSPPVSRPKKRVRFVVPESPKIDRGAREELQELMEAR 718 (779)
T ss_pred ccccccc--cccccccccccccccccccccccccccccccccccCccccCcccceeeccccccccchhHHHHHHHHHHHH
Confidence 1111 1111111000000 000 000000000000000 0 00011235799999999999
Q ss_pred hcCcEEEEeeceEeecCCchhHHHHhHHHHHHHHHhhccCCcccccCCCCCEEEEeeEEEC
Q 041332 693 ESGVAYIIGHSYAKAKKSSTILKKFAINVVYAFLSKNFREPEVGLNVPHASLLEVGMIYYV 753 (753)
Q Consensus 693 e~~~sYflGr~~v~a~~~s~~~kklvin~lF~fL~rNar~~~~~f~IP~~rvVEVG~~y~i 753 (753)
|+|++|++||++++++++|+|+||++||++|.|||||||++...|+|||+|++||||+|||
T Consensus 719 eaGVvYIlG~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 719 EAGMAYILGHSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred HcCcEEEecCceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999997
No 3
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=9e-240 Score=2025.51 Aligned_cols=746 Identities=44% Similarity=0.799 Sum_probs=677.2
Q ss_pred cccccccccccc-----cccccHhHHHHHHHhhcceeecccCcchhHHHHhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 041332 5 EEFLEQGISQQN-----FKRVSCTTVVSLAYQSLGVVYGDLSTSPLYVYKTAFSGKLSLHENDEEIYGVLSFIFWTFTLI 79 (753)
Q Consensus 5 ~~~~~~~~~~~~-----~~~~~w~~~~~La~~alGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~li 79 (753)
.||+|+++..+. ++...|+ ++.|++||||||||||||||||||+++|++ .+ .++++||+|+|||||||||||
T Consensus 78 ~~~~e~~~~~~~~~~~~~~~~~w~-~l~La~qslGVVyGDIGTSPLYv~~s~F~~-~~-~~~~~dIlGvLSLIfWtLtLi 154 (852)
T PLN00151 78 SFDVEAMEIPGAHRHDSEDLSVGR-TLALAFQTLGVVFGDVGTSPLYTFSVMFSK-VP-IKSEEDVLGALSLVLYTLILI 154 (852)
T ss_pred hhhhcccccccccccccccccHHH-HHHHHHhhhceEeCcCCCCHHHHHHHHhcC-CC-CCChhheeeehHHHHHHHHHH
Confidence 388999876321 2345675 588999999999999999999999999975 21 258999999999999999999
Q ss_pred HhhheeeEEEEecCCCCchHHhHHHHHhcccccccCCCCccchhhhcccccCCC-CccccchhhHHHhhhccchhhHHHH
Q 041332 80 ALLKYVFVVMSADDNGEGGTVALYSLLCRHARLSTLPNQQATDEKLSSYATDGS-ADTWQSSGLKALFEKHQRFSNMLLI 158 (753)
Q Consensus 80 v~iKYv~ivlradn~GEGGi~AL~sL~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~l~~ 158 (753)
+++|||+|||||||||||||||||||+||++|++++||||++|+++|+|+.+.+ ++.+++.++|++||+|++.|.++++
T Consensus 155 v~iKYV~iVLrAdd~GEGGtfALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~lE~s~~~k~~ll~ 234 (852)
T PLN00151 155 PLAKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKERLETSSLLKKLLLL 234 (852)
T ss_pred HHHhheeEEEEecCCCCchHHHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccchhHHHHHHhhhhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998865 5566788999999999999999999
Q ss_pred HHHHhhhhhccCccccchhhhhhhcccceeecccCCcceEeehhHHHHHHHHhhhhccccchhhhhhhHHHHHHHHHHHH
Q 041332 159 FVLLGTSMAIGDGVLTPTISVLSAVSGVQVKIRELHENYVVLISCVILVGLFSLQHHGTHRVAFIFAPIVTTWLLCISSI 238 (753)
Q Consensus 159 l~l~G~al~~gDgviTPAISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIml~WF~~l~~~ 238 (753)
+|++|+||+|||||||||||||||||||++..|++++++|+||||+||++||++||+||+|||++|||||++||++|+++
T Consensus 235 l~l~GtamviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPImllWFl~i~~i 314 (852)
T PLN00151 235 LVLAGTSMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSLGGI 314 (852)
T ss_pred HHHHhHHHHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCcceeeecCHHHHHHHHHhcCcceeeeecceeeeecchhhhhccCCCCCccchhhhhhHhHHHHHHHhhcch
Q 041332 239 GIYNIFQWNPHIFNALSPVYMLKFFRSTGIDGWISLGGVVLSITGVETMFADLGHFSSLSIKVAFTFLVYPCLILAYMGE 318 (753)
Q Consensus 239 Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~~~g~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~PaL~LnY~GQ 318 (753)
|+|||++|||+||+||||+|+++||.+||..||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||
T Consensus 315 GiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~P~LlL~Y~GQ 394 (852)
T PLN00151 315 GIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVLPCLLLAYMGQ 394 (852)
T ss_pred HHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhhHHHHHHHHHcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhhcCcCcccCcccccccccchHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHhcCCCccceEEecCCccCCceeehhh
Q 041332 319 AAFLTKHHEDIQRSFYKAIPEAVFWPVFIVATFAAIVGSQAVISATFSIISQCCALNCFPSVKIIHTSSKIYGQIYIPEV 398 (753)
Q Consensus 319 gA~ll~~p~~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~v 398 (753)
||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|
T Consensus 395 aA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~~~GQIYIP~v 474 (852)
T PLN00151 395 AAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVI 474 (852)
T ss_pred HHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhheeeEeecCchhhhhhhheeehhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhccccCC
Q 041332 399 NWMLMCLCLAVTIGLRDTNMIGHAYGLAVTTVMLVTTCLMGQVMITVWKQRIFIVVAFLLFFGSVELLYISACVYKIPEG 478 (753)
Q Consensus 399 Nw~Lmi~~i~vv~~F~~S~~la~AYGiAVt~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~an~~Ki~~G 478 (753)
||+||++|+++|++||||++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++||+||+.||+||
T Consensus 475 Nw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~G 554 (852)
T PLN00151 475 NWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDG 554 (852)
T ss_pred HHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHhhhhhhhhhhHHHHHhhhhhcCCChhhHHhcCCCCCCccccceEEEEeCCCCCchhhhHhhhhcCCccc
Q 041332 479 GWIPLVLSFIFMAVMYIWNYGTMKKHDFDMENKVSMDSIVALGPSLGMVRVPGIGLVYTNLATGVPAIFGHFVTNLPAFH 558 (753)
Q Consensus 479 GW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lh 558 (753)
||+||++|++++++|++||||++++++++.++++++++|.++.++.++.||||+|+|||++.+++|++|.||++|||++|
T Consensus 555 GW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~h~i~~~~alH 634 (852)
T PLN00151 555 GWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIH 634 (852)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCccc
Confidence 99999999999999999999999999999999999999999988888889999999999999999999999999999999
Q ss_pred eeEEEEEEEEecccccCCCceEEEEEeccCCccEEEEEEEEeeeccCC-chHhHHHHHHHHHHHHHhhccccccccccCC
Q 041332 559 QVLVFVCIKSVQVPHVSENERLLISRVGLKEYGMFRCIVRYGYKDLQQ-ENYDFENTLVSAIVQFVETEGEDESSREAGD 637 (753)
Q Consensus 559 e~vvfl~i~~~~vP~V~~~eR~~v~~l~~~~~g~~rv~~ryGf~e~~~-~~~~l~~~lv~~L~~fI~~e~~~~~~~~~~~ 637 (753)
|++||||||++|+|+||++||+++++++++++|+|||++||||||..+ .+++||++|+++|++|||+|+.+...+++.+
T Consensus 635 e~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~~~~~~ 714 (852)
T PLN00151 635 STIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGN 714 (852)
T ss_pred ceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhhhhhcccccccc
Confidence 999999999999999999999999999999999999999999999975 7899999999999999999875431111111
Q ss_pred ccc-c-------cccCCCCCCC---CCCcccccccc---cC-----CccccC-C--CCCCCCccchhHhHHHHHHhhhcC
Q 041332 638 MDI-E-------VLHAPEHPVK---NSNCNEKLKQS---SY-----GTQVTK-S--GIRHPENFMLKDESLEILKAKESG 695 (753)
Q Consensus 638 ~~~-~-------~~~~~~~~~~---~~~~~~~~~~~---~~-----~~~~s~-~--~~~~~~~~~~~~El~~l~~A~e~~ 695 (753)
.+. + .....+..+. +.+.+.+...+ .. .+.+++ + .+....+.++++|++++++|+|+|
T Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~~l~~a~e~G 794 (852)
T PLN00151 715 DDTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMSSDEDQSLEYELSFIREAKESG 794 (852)
T ss_pred ccccccccccccccccCCCcccccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHcC
Confidence 000 0 0000000000 00000000000 00 000000 0 000011235799999999999999
Q ss_pred cEEEEeeceEeecCCchhHHHHhHHHHHHHHHhhccCCcccccCCCCCEEEEeeEEEC
Q 041332 696 VAYIIGHSYAKAKKSSTILKKFAINVVYAFLSKNFREPEVGLNVPHASLLEVGMIYYV 753 (753)
Q Consensus 696 ~sYflGr~~v~a~~~s~~~kklvin~lF~fL~rNar~~~~~f~IP~~rvVEVG~~y~i 753 (753)
++|++||++++++++|+|+||++||++|.|||||||++...++|||+|++||||+|||
T Consensus 795 v~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 795 VVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred cEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999999999999999999999997
No 4
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=3.3e-239 Score=2022.18 Aligned_cols=741 Identities=48% Similarity=0.885 Sum_probs=677.0
Q ss_pred ccccccccc--cccccccHhHHHHHHHhhcceeecccCcchhHHHHhhccCCCCCCCCchhhhhhhHHHHHHHHHHHhhh
Q 041332 6 EFLEQGISQ--QNFKRVSCTTVVSLAYQSLGVVYGDLSTSPLYVYKTAFSGKLSLHENDEEIYGVLSFIFWTFTLIALLK 83 (753)
Q Consensus 6 ~~~~~~~~~--~~~~~~~w~~~~~La~~alGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~liv~iK 83 (753)
||+|+++.+ +..++.+|+.++.|++||||||||||||||||||+++|++.+ .+++|||+|+||||||||||++++|
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~--~~~~~~ilGvLSLIfWtLtLiv~iK 102 (779)
T PLN00150 25 LGVDADSVRSMYFSSPNWPKVIMHLAYQSLGVVYGDLGTSPLYVFKSTFANVG--VKNNDDIIGALSLIIYTLTIIPLIK 102 (779)
T ss_pred cCcchhhcccccccccccHHHHHHHHHhccCeEeCcCccchHHHHHHHhcCCC--CCCHHHhHhHHHHHHHHHHHHHHHh
Confidence 999999876 456788999999999999999999999999999999997532 5789999999999999999999999
Q ss_pred eeeEEEEecCCCCchHHhHHHHHhcccccccCCCCccchhhhcccccCCCCccccchhhHHHhhhccchhhHHHHHHHHh
Q 041332 84 YVFVVMSADDNGEGGTVALYSLLCRHARLSTLPNQQATDEKLSSYATDGSADTWQSSGLKALFEKHQRFSNMLLIFVLLG 163 (753)
Q Consensus 84 Yv~ivlradn~GEGGi~AL~sL~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~l~l~G 163 (753)
||+|||||||||||||||||||+|||+|++++||++..|+++++|+.+ +..+..++|++||+++..|++++++|++|
T Consensus 103 YV~ivLrAdn~GEGGtfALysLl~r~aki~l~~~~~~~~~~~s~~~~~---~~~r~~~~k~~lE~~~~~~~~l~~l~l~G 179 (779)
T PLN00150 103 YVFIVLRANDNGEGGSFALYSLLCRYCNISLLPNQHPTDVELTTYVVD---NMNRKTRIQRKLENSRVWQNVLLLIVLLG 179 (779)
T ss_pred heeEEEEccCCCCcchhhHHHHHhhhcccccCCccccchhhhhhcccc---cchhhhHHHHhhhcchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998763 23334569999999998999999999999
Q ss_pred hhhhccCccccchhhhhhhcccceeecccCCcceEeehhHHHHHHHHhhhhccccchhhhhhhHHHHHHHHHHHHHHHhh
Q 041332 164 TSMAIGDGVLTPTISVLSAVSGVQVKIRELHENYVVLISCVILVGLFSLQHHGTHRVAFIFAPIVTTWLLCISSIGIYNI 243 (753)
Q Consensus 164 ~al~~gDgviTPAISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIml~WF~~l~~~Gi~~I 243 (753)
+||+||||+||||||||||||||++..|++++++|+||||+||++||++||+||+|||++|||||++||++||++|+|||
T Consensus 180 ~~m~~gDgviTPAISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIm~~Wf~~i~~iGiyni 259 (779)
T PLN00150 180 TCMVIGDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAPIFLCWFFSLALIGCYNI 259 (779)
T ss_pred HHHHhcccccccchhhhhhhccccccCCCCCCCeehhhHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988899999999999999999999999999999999999999999999999
Q ss_pred cccCcceeeecCHHHHHHHHHhcCcceeeeecceeeeecchhhhhccCCCCCccchhhhhhHhHHHHHHHhhcchhhHhh
Q 041332 244 FQWNPHIFNALSPVYMLKFFRSTGIDGWISLGGVVLSITGVETMFADLGHFSSLSIKVAFTFLVYPCLILAYMGEAAFLT 323 (753)
Q Consensus 244 ~~~~P~Vl~AlnP~yai~f~~~~~~~g~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll 323 (753)
++|||+||+|+||+||++||.+||..||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||+
T Consensus 260 ~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~LlL~Y~GQaA~ll 339 (779)
T PLN00150 260 IKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTSLVYPCLLLTYLGQAAYLV 339 (779)
T ss_pred HhcCHHHHhhcCHHHHHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceeeeehhhHHHHHHHHHcchHHHHh
Confidence 99899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCcccCcccccccccchHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHhcCCCccceEEecCCccCCceeehhhHHHHH
Q 041332 324 KHHEDIQRSFYKAIPEAVFWPVFIVATFAAIVGSQAVISATFSIISQCCALNCFPSVKIIHTSSKIYGQIYIPEVNWMLM 403 (753)
Q Consensus 324 ~~p~~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~Lm 403 (753)
+||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||
T Consensus 340 ~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS~~~~GQIYIP~vNw~Lm 419 (779)
T PLN00150 340 KHMEDVNDPFYRSLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNKVHGQVYIPEINWILM 419 (779)
T ss_pred cCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhheeeEeecCchhhhhhhheeehhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhccccCCccHHH
Q 041332 404 CLCLAVTIGLRDTNMIGHAYGLAVTTVMLVTTCLMGQVMITVWKQRIFIVVAFLLFFGSVELLYISACVYKIPEGGWIPL 483 (753)
Q Consensus 404 i~~i~vv~~F~~S~~la~AYGiAVt~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~an~~Ki~~GGW~pl 483 (753)
++|+++|++||||++||+|||+||++||++||+|+++||+.+||||++++++|+++|+++|++||+||+.||+||||+||
T Consensus 420 v~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl 499 (779)
T PLN00150 420 VLCLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYFSAVLFKVTQGGWVPL 499 (779)
T ss_pred HHHHhheEEecChHHHHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhHHHHHhhhhhcCCChhhHHhcCCCCCCccccceEEEEeCCCCCchhhhHhhhhcCCccceeEEE
Q 041332 484 VLSFIFMAVMYIWNYGTMKKHDFDMENKVSMDSIVALGPSLGMVRVPGIGLVYTNLATGVPAIFGHFVTNLPAFHQVLVF 563 (753)
Q Consensus 484 ~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~vvf 563 (753)
++|++++++|++||||++++++++.+|++|+++|.++.++.++.||||+|+|||++.+++|++|.||++|||++||++||
T Consensus 500 ~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~v~~~~~lhe~~Vf 579 (779)
T PLN00150 500 VIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPPLFSHFITNLPAIHSTVVF 579 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCCCCCCCHHHHHHHHhCCcccceEEE
Confidence 99999999999999999999999999999999998887777788999999999999999999999999999999999999
Q ss_pred EEEEEecccccCCCceEEEEEeccCCccEEEEEEEEeeeccCCchHhHHHHHHHHHHHHHhhccccccccccCC-ccccc
Q 041332 564 VCIKSVQVPHVSENERLLISRVGLKEYGMFRCIVRYGYKDLQQENYDFENTLVSAIVQFVETEGEDESSREAGD-MDIEV 642 (753)
Q Consensus 564 l~i~~~~vP~V~~~eR~~v~~l~~~~~g~~rv~~ryGf~e~~~~~~~l~~~lv~~L~~fI~~e~~~~~~~~~~~-~~~~~ 642 (753)
+||+++|+|+||++||+++++++++++++|||++||||||....+++||++|+++|++||++|+.+...+++.+ .+.+.
T Consensus 580 l~i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~vvryGy~d~~~d~~dFE~~LvesL~~FIr~e~~~~~~~~~~~~~~~~~ 659 (779)
T PLN00150 580 VCIKYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLEKKDDNFEQLLIASLERFIEIESFREQSDLESMAASWTP 659 (779)
T ss_pred EEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcCcccchHHHHHHHHHHHHHHHhhhhccccccccccccccc
Confidence 99999999999999999999999987789999999999999888999999999999999999875332221110 00000
Q ss_pred cc---CCCCC----CCCCCcc-cccccccCCccccCCCCC---CCCccchhHhHHHHHHhhhcCcEEEEeeceEeecCCc
Q 041332 643 LH---APEHP----VKNSNCN-EKLKQSSYGTQVTKSGIR---HPENFMLKDESLEILKAKESGVAYIIGHSYAKAKKSS 711 (753)
Q Consensus 643 ~~---~~~~~----~~~~~~~-~~~~~~~~~~~~s~~~~~---~~~~~~~~~El~~l~~A~e~~~sYflGr~~v~a~~~s 711 (753)
.. ..+.+ +++.+.. .+.+ +.++. +++..++ ...+.+++||++++++|+|+|++|++||++++++++|
T Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~Ak~~S 737 (779)
T PLN00150 660 EELMGEGNSVGSGLFTQYDQSDINFA-TSQEW-KRPSSQEDSVSGHSSDTQDEVAFLNKCKEAGVVYILGNNDVKARKDS 737 (779)
T ss_pred ccccccCCcccccccccccccccccc-ccccc-ccccccccccccccccHHHHHHHHHHHHHcCcEEEeccceEEEcCCC
Confidence 00 00000 0000000 0000 00000 0000000 0112357999999999999999999999999999999
Q ss_pred hhHHHHhHHHHHHHHHhhccCCcccccCCCCCEEEEeeEEEC
Q 041332 712 TILKKFAINVVYAFLSKNFREPEVGLNVPHASLLEVGMIYYV 753 (753)
Q Consensus 712 ~~~kklvin~lF~fL~rNar~~~~~f~IP~~rvVEVG~~y~i 753 (753)
+|+||++||++|.|||||||++...++|||+|++||||+|||
T Consensus 738 s~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 738 GFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred cHHHHHHHHHHHHHHHHhccCCccccCCChHHeEEeceEEEC
Confidence 999999999999999999999999999999999999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=2.7e-230 Score=1941.55 Aligned_cols=687 Identities=50% Similarity=0.866 Sum_probs=651.3
Q ss_pred HHHhhcceeecccCcchhHHHHhhccCCCCCCCCchhhhhhhHHHHHHHHHHHhhheeeEEEEecCCCCchHHhHHHHHh
Q 041332 28 LAYQSLGVVYGDLSTSPLYVYKTAFSGKLSLHENDEEIYGVLSFIFWTFTLIALLKYVFVVMSADDNGEGGTVALYSLLC 107 (753)
Q Consensus 28 La~~alGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~liv~iKYv~ivlradn~GEGGi~AL~sL~~ 107 (753)
|++||||||||||||||||||+++|+++ ++++|||+|+|||||||||++|++|||++||||||||||||||||||+|
T Consensus 1 La~~alGvVyGDIGTSPLY~~~~~f~~~---~~~~~~ilGvlSLIfWtL~livtiKYv~ivlrAdn~GEGGi~AL~sL~~ 77 (688)
T TIGR00794 1 LAFQSLGVIYGDIGTSPLYVLSSTFSGG---FPTERDIFGVLSLIFWLLTFIVSFKYIFIVLRADNNGEGGTFALYSLIG 77 (688)
T ss_pred CcceeeeeEeCcCcCCHHHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHH
Confidence 5799999999999999999999999653 4789999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCccchhhhcccccCCCCccccchhhHHHhhhccchhhHHHHHHHHhhhhhccCccccchhhhhhhcccce
Q 041332 108 RHARLSTLPNQQATDEKLSSYATDGSADTWQSSGLKALFEKHQRFSNMLLIFVLLGTSMAIGDGVLTPTISVLSAVSGVQ 187 (753)
Q Consensus 108 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~l~l~G~al~~gDgviTPAISVLSAVeGl~ 187 (753)
|++|.+.+|++++.|+++++|+.+.+++..++.++|+++|++++.|++++++|++|+||+||||+||||||||||||||+
T Consensus 78 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~~~l~G~al~~gDgviTPAiSVLSAVeGl~ 157 (688)
T TIGR00794 78 RYAKISARPVHQELDRAESSYSTKSPNLLNKTTSLKTKLELSKFISKFLVIFGLLGGSMVMGDGVLTPAISVLSAVSGLE 157 (688)
T ss_pred HhccccCCCcccchhhhhhhcccccccccchhhHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhcccc
Confidence 99999999999999999999999887766777899999999988888999999999999999999999999999999999
Q ss_pred eecccCCcceEeehhHHHHHHHHhhhhccccchhhhhhhHHHHHHHHHHHHHHHhhcccCcceeeecCHHHHHHHHHhcC
Q 041332 188 VKIRELHENYVVLISCVILVGLFSLQHHGTHRVAFIFAPIVTTWLLCISSIGIYNIFQWNPHIFNALSPVYMLKFFRSTG 267 (753)
Q Consensus 188 v~~p~~~~~~vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIml~WF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~ 267 (753)
++.|++++++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+||
T Consensus 158 v~~p~~~~~~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~~ 237 (688)
T TIGR00794 158 IVAPSLSDTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIVKFNPEVLKALSPYYAVQFFIEYG 237 (688)
T ss_pred ccCCCCCCCeehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHHHHHHHHCC
Confidence 99999977799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeecceeeeecchhhhhccCCCCCccchhhhhhHhHHHHHHHhhcchhhHhhcCcCcccCcccccccccchHHHHH
Q 041332 268 IDGWISLGGVVLSITGVETMFADLGHFSSLSIKVAFTFLVYPCLILAYMGEAAFLTKHHEDIQRSFYKAIPEAVFWPVFI 347 (753)
Q Consensus 268 ~~g~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~P~~v 347 (753)
..||.+||+||||+|||||||||||||||+|||+||+++|||||+|||+|||||+++||++.+||||+++|+|++|||++
T Consensus 238 ~~~~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~~v 317 (688)
T TIGR00794 238 TVGWVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKHPEAIKNPFFLSIPDWALWPLFI 317 (688)
T ss_pred CceeeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcCcchhcCcHHHhCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHhcCCCccceEEecCCccCCceeehhhHHHHHHHhheeeEeecCchhhhhhhheee
Q 041332 348 VATFAAIVGSQAVISATFSIISQCCALNCFPSVKIIHTSSKIYGQIYIPEVNWMLMCLCLAVTIGLRDTNMIGHAYGLAV 427 (753)
Q Consensus 348 lAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~S~~la~AYGiAV 427 (753)
|||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||+|||+|||+||
T Consensus 318 lAtlAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S~~la~AYGiaV 397 (688)
T TIGR00794 318 IATLAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDTNNLGAAYGIAV 397 (688)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHheeEEecChHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhccccCCccHHHHHHHHHhhhhhhhhhhHHHHHhhh
Q 041332 428 TTVMLVTTCLMGQVMITVWKQRIFIVVAFLLFFGSVELLYISACVYKIPEGGWIPLVLSFIFMAVMYIWNYGTMKKHDFD 507 (753)
Q Consensus 428 t~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~an~~Ki~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~ 507 (753)
++||+|||+|++++|+.+||||++++++++++|+.+|++||+||+.||+||||+||++|++++++|++|+|||+++++++
T Consensus 398 t~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~ 477 (688)
T TIGR00794 398 TGTFLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTWRYGRFRKLRRD 477 (688)
T ss_pred hhhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCChhhHHhcCCCCC-CccccceEEEEeCCCCCchhhhHhhhhcCCccceeEEEEEEEEecccccCCCceEEEEEec
Q 041332 508 MENKVSMDSIVALGPSLG-MVRVPGIGLVYTNLATGVPAIFGHFVTNLPAFHQVLVFVCIKSVQVPHVSENERLLISRVG 586 (753)
Q Consensus 508 ~~~~~~l~~~~~~~~~~~-~~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~vvfl~i~~~~vP~V~~~eR~~v~~l~ 586 (753)
+++++|+++|++.+.+.. ..|+||+|+|||+..+++|+++.||++|||++||++||+||+++|+||||++||+++++++
T Consensus 478 ~~~~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp~~eR~~v~~l~ 557 (688)
T TIGR00794 478 HEHRVSISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVHNEERVQISQVG 557 (688)
T ss_pred hhcCCCHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccceEEEEEEEEECCCCcCCcceEEEEEEEc
Confidence 999999999988554444 4799999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccEEEEEEEEeeeccCCchHhHHHHHHHHHHHHHhhccccccccccCCcccccccCCCCCCCCCCcccccccccCCc
Q 041332 587 LKEYGMFRCIVRYGYKDLQQENYDFENTLVSAIVQFVETEGEDESSREAGDMDIEVLHAPEHPVKNSNCNEKLKQSSYGT 666 (753)
Q Consensus 587 ~~~~g~~rv~~ryGf~e~~~~~~~l~~~lv~~L~~fI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (753)
+++ |+|||++||||||+||+|++|+++++++|++|++++..+...+.+ +.
T Consensus 558 ~~~-g~~rv~~~yGf~e~~~~~~~l~~~ii~~L~~fi~~~~~~~~~~~~-~~---------------------------- 607 (688)
T TIGR00794 558 PTE-GMYRCVIRYGFMDTPNEPKELAAHIVNSIVEFVEHECGFNLNNLE-EL---------------------------- 607 (688)
T ss_pred CCC-CEEEEEEEecCCcCCCcHHHHHHHHHHHHHHHHHHHhhhcccccc-cc----------------------------
Confidence 743 899999999999999999999999999999999776431100000 00
Q ss_pred cccCCCCCCCCccchhHhHHHHHHhhhcCcEEEEeeceEeecCCchhHHHHhHHHHHHHHHhhccCCcccccCCCCCEEE
Q 041332 667 QVTKSGIRHPENFMLKDESLEILKAKESGVAYIIGHSYAKAKKSSTILKKFAINVVYAFLSKNFREPEVGLNVPHASLLE 746 (753)
Q Consensus 667 ~~s~~~~~~~~~~~~~~El~~l~~A~e~~~sYflGr~~v~a~~~s~~~kklvin~lF~fL~rNar~~~~~f~IP~~rvVE 746 (753)
++ + ..+...+||+++++++.|+|++||+||+++++++++++.||..||++|+||+||||+++++|+||+||+||
T Consensus 608 -~~---~--~~~~~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~~~~~~~~I~~lf~~l~rn~~~~~~~~~iP~~rvve 681 (688)
T TIGR00794 608 -SD---K--RCRMPIEEIFENAMETKEHGYSYFMGEESLILKKRSPILRKIRVNHVFLFIRRNARRAPKVLEIPPDRLLE 681 (688)
T ss_pred -cc---c--ccccchHHHHHHHHHHhhcCCEEEeeceEEEECCCccHHHHHHHHHHHHHHHHhccChhhheeCChhhEEE
Confidence 00 0 01112588999999999999999999999999999998899888999999999999999999999999999
Q ss_pred EeeEEEC
Q 041332 747 VGMIYYV 753 (753)
Q Consensus 747 VG~~y~i 753 (753)
||++|||
T Consensus 682 vG~~~~i 688 (688)
T TIGR00794 682 VGTVVEI 688 (688)
T ss_pred EeeEEEC
Confidence 9999996
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=6.1e-219 Score=1824.37 Aligned_cols=609 Identities=32% Similarity=0.600 Sum_probs=584.0
Q ss_pred HHHHhhcceeecccCcchhHHHHhhccCCCCCCCCchhhhhhhHHHHHHHHHHHhhheeeEEEEecCCCCchHHhHHHHH
Q 041332 27 SLAYQSLGVVYGDLSTSPLYVYKTAFSGKLSLHENDEEIYGVLSFIFWTFTLIALLKYVFVVMSADDNGEGGTVALYSLL 106 (753)
Q Consensus 27 ~La~~alGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~liv~iKYv~ivlradn~GEGGi~AL~sL~ 106 (753)
+++++||||||||||||||||++++|.++++.++++|||+|++||||||||++|++|||+++|||||||||||||||||+
T Consensus 11 ~l~l~aLGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~livtiKYv~ivlrADn~GEGGi~AL~aL~ 90 (622)
T PRK10745 11 AITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLILVVSIKYLTFVMRADNAGEGGILTLMSLA 90 (622)
T ss_pred HHHHhhcceEecCCCCChHHHHHHHhccCCCCCCChhHeehhhHHHHHHHHHHHHHHhheEEEecCCCCCchHHHHHHHH
Confidence 48899999999999999999999999876666789999999999999999999999999999999999999999999999
Q ss_pred hcccccccCCCCccchhhhcccccCCCCccccchhhHHHhhhccchhhHHHHHHHHhhhhhccCccccchhhhhhhcccc
Q 041332 107 CRHARLSTLPNQQATDEKLSSYATDGSADTWQSSGLKALFEKHQRFSNMLLIFVLLGTSMAIGDGVLTPTISVLSAVSGV 186 (753)
Q Consensus 107 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~l~l~G~al~~gDgviTPAISVLSAVeGl 186 (753)
+|+.+ ++.|.+++++|++|+||+||||+||||||||||||||
T Consensus 91 ~~~~~--------------------------------------~~~~~~l~~lgl~Gaal~~gDgvITPAISVLSAVEGL 132 (622)
T PRK10745 91 GRNTS--------------------------------------ARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEGL 132 (622)
T ss_pred hhhcc--------------------------------------cchhHHHHHHHHHHHHHHhhccccchhHHHHHHhhcc
Confidence 77532 2445578899999999999999999999999999999
Q ss_pred eeecccCCcceEeehhHHHHHHHHhhhhccccchhhhhhhHHHHHHHHHHHHHHHhhcccCcceeeecCHHHHHHHHHhc
Q 041332 187 QVKIRELHENYVVLISCVILVGLFSLQHHGTHRVAFIFAPIVTTWLLCISSIGIYNIFQWNPHIFNALSPVYMLKFFRST 266 (753)
Q Consensus 187 ~v~~p~~~~~~vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIml~WF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~ 266 (753)
++.+|++++ +|+||||+||++||++||+||+|||++|||||++||++||++|+|||.+ ||+||+|+||+||++||.+|
T Consensus 133 ~v~~p~l~~-~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~vWF~~i~~~Gi~~I~~-~P~Vl~AlnP~ya~~f~~~~ 210 (622)
T PRK10745 133 EIVAPQLDT-YIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLTLAVLGLRSIIA-NPEVLHALNPMWAVHFFLEY 210 (622)
T ss_pred cccCCCCCC-ccHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHhc-CHHHHhHhCHHHHHHHHHhC
Confidence 999999966 9999999999999999999999999999999999999999999999998 89999999999999999999
Q ss_pred CcceeeeecceeeeecchhhhhccCCCCCccchhhhhhHhHHHHHHHhhcchhhHhhcCcCcccCcccccccccchHHHH
Q 041332 267 GIDGWISLGGVVLSITGVETMFADLGHFSSLSIKVAFTFLVYPCLILAYMGEAAFLTKHHEDIQRSFYKAIPEAVFWPVF 346 (753)
Q Consensus 267 ~~~g~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~P~~ 346 (753)
|..||.+||+||||+|||||||||||||||+|||+||+++|||||+|||+||||++++||++.+||||+++|+|++|||+
T Consensus 211 ~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~v 290 (622)
T PRK10745 211 KTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLL 290 (622)
T ss_pred CCceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchHHHHhcCchhhcCcHHHhCChhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhHHHHHHhcCCCccceEEecCCccCCceeehhhHHHHHHHhheeeEeecCchhhhhhhhee
Q 041332 347 IVATFAAIVGSQAVISATFSIISQCCALNCFPSVKIIHTSSKIYGQIYIPEVNWMLMCLCLAVTIGLRDTNMIGHAYGLA 426 (753)
Q Consensus 347 vlAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~S~~la~AYGiA 426 (753)
+|||+||||||||+|||+||++|||+|||||||+||+|||++++||||||+|||+||++|+++|++||||+|||+|||+|
T Consensus 291 iLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vNw~Lmv~~i~~vl~F~sS~~La~AYGiA 370 (622)
T PRK10745 291 ILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVNWLLYVAVVIVIVSFEHSSNLAAAYGIA 370 (622)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHeeEEEecCchHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ehhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhccccCCccHHHHHHHHHhhhhhhhhhhHHHHHhh
Q 041332 427 VTTVMLVTTCLMGQVMITVWKQRIFIVVAFLLFFGSVELLYISACVYKIPEGGWIPLVLSFIFMAVMYIWNYGTMKKHDF 506 (753)
Q Consensus 427 Vt~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~an~~Ki~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~ 506 (753)
||+||++||+|++++++.+|+|+++++++++++|+.+|+.||+||+.|++||||+|+++|++++++|+||++||++++++
T Consensus 371 Vt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~v~~~iM~tW~~G~~~~~~~ 450 (622)
T PRK10745 371 VTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSLGLVMFIVMTTWKSERFRLLRR 450 (622)
T ss_pred heeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCChhhHHhcCCCCCCccccceEEEEeCCCCCchhhhHhhhhcCCccceeEEEEEEEEecccccCCCceEEEEEec
Q 041332 507 DMENKVSMDSIVALGPSLGMVRVPGIGLVYTNLATGVPAIFGHFVTNLPAFHQVLVFVCIKSVQVPHVSENERLLISRVG 586 (753)
Q Consensus 507 ~~~~~~~l~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~vvfl~i~~~~vP~V~~~eR~~v~~l~ 586 (753)
++++++++++|++.+++.++.|+||||+|+|+.++++|+++.||+||||++||++||+||+++|+|||+++||+++++++
T Consensus 451 ~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lhe~~v~l~v~~~~~P~V~~~eR~~v~~l~ 530 (622)
T PRK10745 451 MHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLS 530 (622)
T ss_pred HHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccceEEEEEEEEECCCcccCcccEEEEEEEC
Confidence 99999999999998877777799999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccEEEEEEEEeeeccCCchHhHHHHHHHHHHHHHhhccccccccccCCcccccccCCCCCCCCCCcccccccccCCc
Q 041332 587 LKEYGMFRCIVRYGYKDLQQENYDFENTLVSAIVQFVETEGEDESSREAGDMDIEVLHAPEHPVKNSNCNEKLKQSSYGT 666 (753)
Q Consensus 587 ~~~~g~~rv~~ryGf~e~~~~~~~l~~~lv~~L~~fI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (753)
+ |+|||++||||||+||+|+.+++ +
T Consensus 531 ~---g~~rv~~~yGf~e~~~i~~~L~~---------~------------------------------------------- 555 (622)
T PRK10745 531 P---TFWRVVASYGWRETPNVEEVFHR---------C------------------------------------------- 555 (622)
T ss_pred C---CEEEEEEEecCCCCCCHHHHHHH---------H-------------------------------------------
Confidence 7 89999999999999999999987 2
Q ss_pred cccCCCCCCCCccchhHhHHHHHHhhhcCcEEEEeeceEeecCCch---hHHHHhHHHHHHHHHhhccCCcccccCCCCC
Q 041332 667 QVTKSGIRHPENFMLKDESLEILKAKESGVAYIIGHSYAKAKKSST---ILKKFAINVVYAFLSKNFREPEVGLNVPHAS 743 (753)
Q Consensus 667 ~~s~~~~~~~~~~~~~~El~~l~~A~e~~~sYflGr~~v~a~~~s~---~~kklvin~lF~fL~rNar~~~~~f~IP~~r 743 (753)
+.+|.++ |++ +++||+||++++++++++ |+|| +|+||+|||++++++|+||+||
T Consensus 556 ------~~~g~~~-------~~~-----~~s~fl~r~~l~~~~~~~m~~wr~~-----lF~~m~rna~~~~~~f~lP~~r 612 (622)
T PRK10745 556 ------GLEGLSC-------RMM-----ETSFFMSHESLILGKRPWYLRLRGK-----LFLLLQRNALRAPDQFEIPPNR 612 (622)
T ss_pred ------HhCCCCC-------Ccc-----ceEEEEeeEEEEeCCCCCcHHHHHH-----HHHHHHHcCCCHHHHhCCCccc
Confidence 1123334 455 899999999999887776 6555 8999999999999999999999
Q ss_pred EEEEeeEEEC
Q 041332 744 LLEVGMIYYV 753 (753)
Q Consensus 744 vVEVG~~y~i 753 (753)
|||+|+++|+
T Consensus 613 vvelG~~v~i 622 (622)
T PRK10745 613 VIELGTQVEI 622 (622)
T ss_pred EEEEeeEEeC
Confidence 9999999986
No 7
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.2e-212 Score=1726.19 Aligned_cols=612 Identities=35% Similarity=0.650 Sum_probs=593.9
Q ss_pred HHHHHHHhhcceeecccCcchhHHHHhhccCCCCCCCCchhhhhhhHHHHHHHHHHHhhheeeEEEEecCCCCchHHhHH
Q 041332 24 TVVSLAYQSLGVVYGDLSTSPLYVYKTAFSGKLSLHENDEEIYGVLSFIFWTFTLIALLKYVFVVMSADDNGEGGTVALY 103 (753)
Q Consensus 24 ~~~~La~~alGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~liv~iKYv~ivlradn~GEGGi~AL~ 103 (753)
.+.+++++|+|||||||||||||+++|+|.+.++...++++|+|++||||||||+|||+|||+++|||||||||||++|+
T Consensus 14 ~~~~l~lgAiGVVyGDIGTSPLYa~~e~~~~~~~~~v~~~~VlGvlSLi~WtLtlIVTiKYv~~vlRADN~GEGGilsL~ 93 (627)
T COG3158 14 STKALTLGAIGVVYGDIGTSPLYALREALSGQGGLGVSRDEVLGVLSLIIWTLTLIVTIKYVLFVLRADNNGEGGILSLM 93 (627)
T ss_pred cchhHhhheeeeEeccCCCChHHHHHHHhccCCCCCCCcceeeeHHHHHHHHHHHHHHHhhheeEEecCCCCCchhhhHH
Confidence 35678999999999999999999999999987777789999999999999999999999999999999999999999999
Q ss_pred HHHhcccccccCCCCccchhhhcccccCCCCccccchhhHHHhhhccchhhHHHHHHHHhhhhhccCccccchhhhhhhc
Q 041332 104 SLLCRHARLSTLPNQQATDEKLSSYATDGSADTWQSSGLKALFEKHQRFSNMLLIFVLLGTSMAIGDGVLTPTISVLSAV 183 (753)
Q Consensus 104 sL~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~l~l~G~al~~gDgviTPAISVLSAV 183 (753)
+|++|.++ |...++.++|++|+|+|||||+|||||||||||
T Consensus 94 aL~~~~~~---------------------------------------~~~~~l~~~g~iGaalf~GD~vITPAiSVlSAv 134 (627)
T COG3158 94 ALARRAAP---------------------------------------RRTALLIILGLIGAALFYGDAVITPAISVLSAV 134 (627)
T ss_pred HHHHhhcC---------------------------------------CCchhhhhHHHHhHHHHhcccccchhHHHHHHh
Confidence 99988652 456688999999999999999999999999999
Q ss_pred ccceeecccCCcceEeehhHHHHHHHHhhhhccccchhhhhhhHHHHHHHHHHHHHHHhhcccCcceeeecCHHHHHHHH
Q 041332 184 SGVQVKIRELHENYVVLISCVILVGLFSLQHHGTHRVAFIFAPIVTTWLLCISSIGIYNIFQWNPHIFNALSPVYMLKFF 263 (753)
Q Consensus 184 eGl~v~~p~~~~~~vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIml~WF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~ 263 (753)
|||++++|.+++ +|+|||++||++||++||+||++||++|||||++||+++|++|++||.+ ||+||+|+||+||++|+
T Consensus 135 EGL~iv~p~~~~-~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~lWF~~l~~~Gl~~i~~-~p~IL~AiNP~yAi~fl 212 (627)
T COG3158 135 EGLEIVTPALDP-YVVPITLIILVLLFLIQRFGTGRVGKLFGPVMLLWFLALAVLGLINIID-DPEILRAINPYYAVHFL 212 (627)
T ss_pred ccccccCccccC-ccHHHHHHHHHHHHHHhcccchhhhhhhccHHHHHHHHHHHHHHHHHhc-CHHHHHHhChHHHHHHH
Confidence 999999999986 9999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred HhcCcceeeeecceeeeecchhhhhccCCCCCccchhhhhhHhHHHHHHHhhcchhhHhhcCcCcccCcccccccccchH
Q 041332 264 RSTGIDGWISLGGVVLSITGVETMFADLGHFSSLSIKVAFTFLVYPCLILAYMGEAAFLTKHHEDIQRSFYKAIPEAVFW 343 (753)
Q Consensus 264 ~~~~~~g~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~ 343 (753)
.++|..||++||+||||+|||||||||||||||+|||.||+++|+|||+|||+||||++|+||++..||||.++|+|+++
T Consensus 213 ~~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQGA~vL~~p~a~~npFF~~~P~~ali 292 (627)
T COG3158 213 LEEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQGALLLSNPEAIGNPFFLLAPDWALI 292 (627)
T ss_pred HhCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHccccceeccCcccccCcHHHhChhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhHHHHHHhcCCCccceEEecCCccCCceeehhhHHHHHHHhheeeEeecCchhhhhhh
Q 041332 344 PVFIVATFAAIVGSQAVISATFSIISQCCALNCFPSVKIIHTSSKIYGQIYIPEVNWMLMCLCLAVTIGLRDTNMIGHAY 423 (753)
Q Consensus 344 P~~vlAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~S~~la~AY 423 (753)
||++|||+||||||||+|||+||++|||||||++|||||.|||+++.||||||.|||+|+++++.++++||+|++||+||
T Consensus 293 P~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN~~L~~~V~~~vl~F~~S~~LAaAY 372 (627)
T COG3158 293 PLVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVNWLLLVAVVFVVLGFGSSSNLAAAY 372 (627)
T ss_pred HHHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHHHHHHHHHhheeeEecChHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred heeehhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhccccCCccHHHHHHHHHhhhhhhhhhhHHHH
Q 041332 424 GLAVTTVMLVTTCLMGQVMITVWKQRIFIVVAFLLFFGSVELLYISACVYKIPEGGWIPLVLSFIFMAVMYIWNYGTMKK 503 (753)
Q Consensus 424 GiAVt~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~an~~Ki~~GGW~pl~ia~~~~~iM~~W~~G~~~~ 503 (753)
|+|||+||+|||+|++++++..|||+++.+.++.++|+.+|..||+||+.|++||||+|+++|++++++|+||++|++++
T Consensus 373 GiAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GGw~pllia~~i~~vM~tW~~g~~~l 452 (627)
T COG3158 373 GIAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGGWLPLLLAAVIFFVMWTWKRGRQIL 452 (627)
T ss_pred ChheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcCCChhhHHhcCCCCCCccccceEEEEeCCCCCchhhhHhhhhcCCccceeEEEEEEEEecccccCCCceEEEE
Q 041332 504 HDFDMENKVSMDSIVALGPSLGMVRVPGIGLVYTNLATGVPAIFGHFVTNLPAFHQVLVFVCIKSVQVPHVSENERLLIS 583 (753)
Q Consensus 504 ~~~~~~~~~~l~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~vvfl~i~~~~vP~V~~~eR~~v~ 583 (753)
+++.+++++|+|.|++.+++.++.||||||||+|+.++.+|.+++||+|||+++||+|||+||+++|+|||+++||++++
T Consensus 453 ~~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvlhe~nv~ltv~t~~~P~v~~~~r~~ve 532 (627)
T COG3158 453 FEKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVLHERNVFLTVRTEDVPYVHPTDRVKVE 532 (627)
T ss_pred HHHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhheeeeeEEEEEEEecCCCCCCccceeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCccEEEEEEEEeeeccCCchHhHHHHHHHHHHHHHhhccccccccccCCcccccccCCCCCCCCCCccccccccc
Q 041332 584 RVGLKEYGMFRCIVRYGYKDLQQENYDFENTLVSAIVQFVETEGEDESSREAGDMDIEVLHAPEHPVKNSNCNEKLKQSS 663 (753)
Q Consensus 584 ~l~~~~~g~~rv~~ryGf~e~~~~~~~l~~~lv~~L~~fI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (753)
++++ +++|++++|||||+||+|+.++.
T Consensus 533 ~l~~---~f~rV~l~~Gfme~pnvp~~l~~-------------------------------------------------- 559 (627)
T COG3158 533 QLSD---DFVRVVLHFGFMETPNVPRALRL-------------------------------------------------- 559 (627)
T ss_pred eccC---ceEEEEEEeeccCCCCHHHHHHH--------------------------------------------------
Confidence 9998 79999999999999999999988
Q ss_pred CCccccCCCCCCCCccchhHhHHHHHHhhhcCcEEEEeeceEeecCCch--hHHHHhHHHHHHHHHhhccCCcccccCCC
Q 041332 664 YGTQVTKSGIRHPENFMLKDESLEILKAKESGVAYIIGHSYAKAKKSST--ILKKFAINVVYAFLSKNFREPEVGLNVPH 741 (753)
Q Consensus 664 ~~~~~s~~~~~~~~~~~~~~El~~l~~A~e~~~sYflGr~~v~a~~~s~--~~kklvin~lF~fL~rNar~~~~~f~IP~ 741 (753)
|+++|+++ |+| +++||+|||+++++++++ .||. ++|++|.||+.+++++|+||+
T Consensus 560 --------~~~~G~~f-------~im-----~tsFfl~re~l~~~~~~g~~~w~~----~lfi~l~r~aa~~~~~F~lp~ 615 (627)
T COG3158 560 --------CRKKGLKF-------DIM-----ETSFFLSRESLIASKNSGMPRWRD----RLFIALARNAASPTDYFKLPP 615 (627)
T ss_pred --------HhhcCcee-------ccc-----ceEEEEEeeeeecCCCCCchHHHH----HHHHHHHHhcCCHHHhhCCCC
Confidence 35557778 888 899999999999999887 3444 489999999999999999999
Q ss_pred CCEEEEeeEEEC
Q 041332 742 ASLLEVGMIYYV 753 (753)
Q Consensus 742 ~rvVEVG~~y~i 753 (753)
|||||+|.|.||
T Consensus 616 ~rvvElGtqveI 627 (627)
T COG3158 616 NRVVELGTQVEI 627 (627)
T ss_pred CcEEEeeeeeeC
Confidence 999999999986
No 8
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=1.4e-200 Score=1664.05 Aligned_cols=534 Identities=45% Similarity=0.835 Sum_probs=521.2
Q ss_pred HHhhcceeecccCcchhHHHHhhccCCCCCCCCchhhhhhhHHHHHHHHHHHhhheeeEEEEecCCCCchHHhHHHHHhc
Q 041332 29 AYQSLGVVYGDLSTSPLYVYKTAFSGKLSLHENDEEIYGVLSFIFWTFTLIALLKYVFVVMSADDNGEGGTVALYSLLCR 108 (753)
Q Consensus 29 a~~alGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~liv~iKYv~ivlradn~GEGGi~AL~sL~~r 108 (753)
|++|||||||||||||||+|+++| ++++.++++|||+|+|||||||||++|++|||+++|||||||||||||||||+||
T Consensus 1 a~~alGVVyGDIGTSPLY~~~~~f-~~~~~~~~~~~vlG~lSlIfWtL~liv~iKYv~ivlradn~GEGGi~aL~sL~~~ 79 (534)
T PF02705_consen 1 ALGALGVVYGDIGTSPLYVFKEIF-GSHGLPPTEENVLGVLSLIFWTLTLIVTIKYVLIVLRADNNGEGGIFALYSLIRR 79 (534)
T ss_pred CceeEEEEeCCCCCCHHHHHHHHH-hhcccCCcHHHHHHHHHHHHHHHHHHHHHheEEEEEEeCCCCChhHHHHHHHHHH
Confidence 589999999999999999999999 4455679999999999999999999999999999999999999999999999986
Q ss_pred ccccccCCCCccchhhhcccccCCCCccccchhhHHHhhhccchhhHHHHHHHHhhhhhccCccccchhhhhhhccccee
Q 041332 109 HARLSTLPNQQATDEKLSSYATDGSADTWQSSGLKALFEKHQRFSNMLLIFVLLGTSMAIGDGVLTPTISVLSAVSGVQV 188 (753)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~l~l~G~al~~gDgviTPAISVLSAVeGl~v 188 (753)
.. |++++.+..++++|++|+||+||||+||||||||||||||++
T Consensus 80 ~~------------------------------------~~~~~~~~~l~~l~l~G~al~~gDgviTPAISVlSAvEGl~v 123 (534)
T PF02705_consen 80 FL------------------------------------KSSKRRRWLLLILGLLGAALFYGDGVITPAISVLSAVEGLEV 123 (534)
T ss_pred hh------------------------------------ccchhHHHHHHHHHHHHhhhhhcceeecchHHHHHHhhhhhc
Confidence 43 245667777899999999999999999999999999999999
Q ss_pred ecccCCcceEeehhHHHHHHHHhhhhccccchhhhhhhHHHHHHHHHHHHHHHhhcccCcceeeecCHHHHHHHHHhcCc
Q 041332 189 KIRELHENYVVLISCVILVGLFSLQHHGTHRVAFIFAPIVTTWLLCISSIGIYNIFQWNPHIFNALSPVYMLKFFRSTGI 268 (753)
Q Consensus 189 ~~p~~~~~~vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIml~WF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~~ 268 (753)
.+|++++ +|+||||+||++||++||+||+|||++|||||++||++||++|+|||++ +|+||+|+||+||++||.+||+
T Consensus 124 ~~p~~~~-~Vv~it~~ILv~LF~iQ~~GT~~ig~~FgPim~~WF~~l~~~G~~~I~~-~p~Vl~A~nP~yai~f~~~~~~ 201 (534)
T PF02705_consen 124 ATPSLEP-YVVPITIAILVGLFAIQRFGTAKIGKLFGPIMLLWFLTLGVLGLYNIIQ-HPEVLKALNPYYAIRFFIRNGW 201 (534)
T ss_pred cCCCCcc-eehhHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHhh-CHHHHHHhCHHHHHHHHHHcCC
Confidence 9999985 9999999999999999999999999999999999999999999999999 6999999999999999999999
Q ss_pred ceeeeecceeeeecchhhhhccCCCCCccchhhhhhHhHHHHHHHhhcchhhHhhcCcCcccCcccccccccchHHHHHH
Q 041332 269 DGWISLGGVVLSITGVETMFADLGHFSSLSIKVAFTFLVYPCLILAYMGEAAFLTKHHEDIQRSFYKAIPEAVFWPVFIV 348 (753)
Q Consensus 269 ~g~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~P~~vl 348 (753)
.||.+||+||||+||+||||||||||||+|||+||+++|||||+|||+||||++++||++.+||||+++|+|++||++++
T Consensus 202 ~~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~il 281 (534)
T PF02705_consen 202 IGFFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQGALLLSHPEAVSNPFFLLIPEWLLWPMVIL 281 (534)
T ss_pred chhhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHHHHHHcCcchhhhHHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHHhcCCCccceEEecCCccCCceeehhhHHHHHHHhheeeEeecCchhhhhhhheeeh
Q 041332 349 ATFAAIVGSQAVISATFSIISQCCALNCFPSVKIIHTSSKIYGQIYIPEVNWMLMCLCLAVTIGLRDTNMIGHAYGLAVT 428 (753)
Q Consensus 349 AtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~S~~la~AYGiAVt 428 (753)
||+||||||||+|||+||++|||++||||||+||+|||++++||||||+|||+||++|++++++||||+|||+|||+||+
T Consensus 282 AtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S~~la~AYGiAVt 361 (534)
T PF02705_consen 282 ATLATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSSSNLAAAYGIAVT 361 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHHHHHHHHHHhhheEECChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhccccCCccHHHHHHHHHhhhhhhhhhhHHHHHhhhh
Q 041332 429 TVMLVTTCLMGQVMITVWKQRIFIVVAFLLFFGSVELLYISACVYKIPEGGWIPLVLSFIFMAVMYIWNYGTMKKHDFDM 508 (753)
Q Consensus 429 ~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~an~~Ki~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~ 508 (753)
+||++||+|++++++.+||||++++++++++|+.+|+.||+||+.||+||||+||++|++++++|+||++||++++++++
T Consensus 362 ~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~ 441 (534)
T PF02705_consen 362 GTMLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTWRRGRKLLYEFER 441 (534)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCChhhHHhcCCCCCCccccceEEEEeCCCCCchhhhHhhhhcCCccceeEEEEEEEEecccccCCCceEEEEEeccC
Q 041332 509 ENKVSMDSIVALGPSLGMVRVPGIGLVYTNLATGVPAIFGHFVTNLPAFHQVLVFVCIKSVQVPHVSENERLLISRVGLK 588 (753)
Q Consensus 509 ~~~~~l~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~vvfl~i~~~~vP~V~~~eR~~v~~l~~~ 588 (753)
++++++++|.++.++.+++|+||+|+|+|+.++++|+++.||++||+++||+++|+||+++|+|+||++||+++++++++
T Consensus 442 ~~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~~~R~~v~~l~~~ 521 (534)
T PF02705_consen 442 ENKLPLDDFLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPPEERYEVERLGPD 521 (534)
T ss_pred hcCCCHHHHHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCcccceEEEEEEEEeccCCCCCceEEEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999963
Q ss_pred CccEEEEEEEEeeec
Q 041332 589 EYGMFRCIVRYGYKD 603 (753)
Q Consensus 589 ~~g~~rv~~ryGf~e 603 (753)
|+|||++||||||
T Consensus 522 --g~~rv~~ryGf~e 534 (534)
T PF02705_consen 522 --GFYRVTLRYGFME 534 (534)
T ss_pred --CEEEEEEEecCCC
Confidence 8999999999998
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=93.19 E-value=0.27 Score=56.53 Aligned_cols=101 Identities=13% Similarity=0.075 Sum_probs=48.7
Q ss_pred eehhHHHHHHHHhhhhccccchhhh---hhhHHHHHHHHHHHHHHHhhcccCcceeeecCHHHHHHHHHhcCcceee-ee
Q 041332 199 VLISCVILVGLFSLQHHGTHRVAFI---FAPIVTTWLLCISSIGIYNIFQWNPHIFNALSPVYMLKFFRSTGIDGWI-SL 274 (753)
Q Consensus 199 v~is~~ILv~LF~iQ~~GT~kvg~~---FgPIml~WF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~~~g~~-~L 274 (753)
..+++++++++..+.-+|....+++ +.-+.++=++.+.+.|++.+.+-+++ ..+|.....-. .++..+|. .+
T Consensus 166 ~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~~~~~~---~~~~~~~f~~~-~~~~~~~~~a~ 241 (501)
T TIGR00911 166 RLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVE---SLNPKNAFEGT-ETSAGGIVLAF 241 (501)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCcccccCCC-CCcHHHHHHHH
Confidence 4577788888899999997665553 33333322233344555544321111 11222110000 01222333 45
Q ss_pred cceeeeecchhhhhccCC--CCCccchhhhh
Q 041332 275 GGVVLSITGVETMFADLG--HFSSLSIKVAF 303 (753)
Q Consensus 275 G~V~L~iTGaEALyADmG--HFg~~~Ir~aw 303 (753)
..++.+.+|-|+.=.--| +-.+|.|.+|-
T Consensus 242 ~~~~~af~G~e~~~~~a~E~knP~r~iPrAi 272 (501)
T TIGR00911 242 YSGIWAYGGWNYLNFVTEEVKNPYRTLPIAI 272 (501)
T ss_pred HHHHHHHHhHHHHhhhHHHhcCchhhhHHHH
Confidence 667778888886433222 23345555543
No 10
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=81.29 E-value=9.3 Score=42.50 Aligned_cols=251 Identities=14% Similarity=0.104 Sum_probs=132.6
Q ss_pred cccchhhhhhhcccceee-cccCCcc--eEeehhHHHHHHHHhhhhccccchhhh---hhhHHH-HHHHHHHHHHHHhhc
Q 041332 172 VLTPTISVLSAVSGVQVK-IRELHEN--YVVLISCVILVGLFSLQHHGTHRVAFI---FAPIVT-TWLLCISSIGIYNIF 244 (753)
Q Consensus 172 viTPAISVLSAVeGl~v~-~p~~~~~--~vv~is~~ILv~LF~iQ~~GT~kvg~~---FgPIml-~WF~~l~~~Gi~~I~ 244 (753)
+.+.++...++.+-+... .|.+.++ ....+++++++..+.+.-+|....+++ .+=+.+ .-++.+.+.|++...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~~~ 168 (426)
T PF13520_consen 89 ILSLASVASSFASYLLSLFGPDLNPSPWPQFLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVSFS 168 (426)
T ss_dssp HHHHHHHHHHHHHHHTTTTTGGGTCSHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred eccccccccchhhhhhhccccccccccchheeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEeeec
Confidence 334444444455544332 2333221 234577888888899999998776664 333333 344455566666554
Q ss_pred ccCcce-----eeecCHHHHHHHHHhcCcc-eeeeecceeeeecchhhhhccCCCCCccchhhhhhHhHHHHHHHhhcch
Q 041332 245 QWNPHI-----FNALSPVYMLKFFRSTGID-GWISLGGVVLSITGVETMFADLGHFSSLSIKVAFTFLVYPCLILAYMGE 318 (753)
Q Consensus 245 ~~~P~V-----l~AlnP~yai~f~~~~~~~-g~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~PaL~LnY~GQ 318 (753)
+ +..- ....+|. +.. -+..+...+.+.+|-|+.=.-.+-.-+|.+.++=..-+.-+.++.-+..
T Consensus 169 ~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~ 238 (426)
T PF13520_consen 169 F-SGFNSLSFSLSTFFPS---------GWPGFLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFS 238 (426)
T ss_dssp C-CHHH----SHSCSSCS---------SSSHHHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c-cccccccccccccCCc---------cccchhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhh
Confidence 3 1111 1112221 111 1445666788889988865444445557777765553333333333333
Q ss_pred hhHhhcCcCc----ccC---c---ccccc-cccchHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHhcCCCccceEEecCC
Q 041332 319 AAFLTKHHED----IQR---S---FYKAI-PEAVFWPVFIVATFAAIVGSQAVISATFSIISQCCALNCFPSVKIIHTSS 387 (753)
Q Consensus 319 gA~ll~~p~~----~~n---p---Ff~~~-P~~~~~P~~vlAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~ 387 (753)
-++...-|.+ .+| | +++.. .++..+.+.+.+.++++-+-.+.+.+.--++.+.-+-|.+|+ +..++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~~k 317 (426)
T PF13520_consen 239 IALLGALPDDELANSSNSPSPFAVLASAVGGSWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPK-WFAKVNK 317 (426)
T ss_dssp HHHHTTSTHCHHHTTTCHHCHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTTSS
T ss_pred heeeecccchhhhcccccccccchhhccccccccccccccccccccccccchhhcchhhcccccccccchhh-hhhhccc
Confidence 3444432321 112 2 23332 467788888888887777777777776667777888999993 2333331
Q ss_pred ccCCceeehhhHHHHHHHhh-eee--Eeec---CchhhhhhhheeehhHHHHHHHHH
Q 041332 388 KIYGQIYIPEVNWMLMCLCL-AVT--IGLR---DTNMIGHAYGLAVTTVMLVTTCLM 438 (753)
Q Consensus 388 ~~~GQIYIP~vNw~Lmi~~i-~vv--~~F~---~S~~la~AYGiAVt~~M~iTT~L~ 438 (753)
+|. |..-.++...+- ++. ..|- +.+.+.+.+.+......+++.+-.
T Consensus 318 --~~~---P~~a~~~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 369 (426)
T PF13520_consen 318 --FGT---PYNAIILVAVISSILLLLFLFIPQSSFDILVSLSSVGYLISYILVILAV 369 (426)
T ss_dssp --SSS---CHHHHHHHHHHHHHHHHHTTTSSSSHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred --cCC---ceeeehhhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 554444333332 222 2332 335566666666666666664333
No 11
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=80.67 E-value=16 Score=40.70 Aligned_cols=177 Identities=17% Similarity=0.133 Sum_probs=104.1
Q ss_pred eEeehhHHHHHHHHhhhhccccchhhhhhhHHHHHHHHHHHHHHHhhcccCcceeeecCHHHHHHHHHhcC--cceeeee
Q 041332 197 YVVLISCVILVGLFSLQHHGTHRVAFIFAPIVTTWLLCISSIGIYNIFQWNPHIFNALSPVYMLKFFRSTG--IDGWISL 274 (753)
Q Consensus 197 ~vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIml~WF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~--~~g~~~L 274 (753)
....++.+++++++.++-+|....++...-..++=++.+.++.+..+..++......+++... ..+ ..-...+
T Consensus 133 ~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 207 (466)
T COG0531 133 LIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP-----GGGSFGGILAAI 207 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc-----ccchHHHHHHHH
Confidence 466789999999999999999988887666665555555555555555533322222221111 000 0123445
Q ss_pred cceeeeecchhhh--hcc-CCCCCccchhhhhhHhHHHHHHHhhcchhhHhhcCcC-ccc-----Cccc---cccc-ccc
Q 041332 275 GGVVLSITGVETM--FAD-LGHFSSLSIKVAFTFLVYPCLILAYMGEAAFLTKHHE-DIQ-----RSFY---KAIP-EAV 341 (753)
Q Consensus 275 G~V~L~iTGaEAL--yAD-mGHFg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~-~~~-----npFf---~~~P-~~~ 341 (753)
+.++.+.+|-|+. +|+ +=+ .+|.|-.|-..-..-+.++-.+++-+..-.-|. +.. +|+. .... .+.
T Consensus 208 ~~~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~ 286 (466)
T COG0531 208 LLAFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNWG 286 (466)
T ss_pred HHHHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccHH
Confidence 5668888998865 442 334 556666666554444444444444444443332 111 4542 2233 366
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHhcCCCcc
Q 041332 342 FWPVFIVATFAAIVGSQAVISATFSIISQCCALNCFPS 379 (753)
Q Consensus 342 ~~P~~vlAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr 379 (753)
.+-+.+++.+++.-+..+.+.+.--+..+.-+-|++|+
T Consensus 287 ~~~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 287 AIIIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 66666666666666667777776667777778999998
No 12
>PRK15049 L-asparagine permease; Provisional
Probab=80.64 E-value=19 Score=41.84 Aligned_cols=175 Identities=18% Similarity=0.116 Sum_probs=76.1
Q ss_pred hhHHHHHHHHhhhhccccchhh---hhhhHHHHHHHHHHHHHHHhhcccCcceeeecCHHHHHHHHHhcC---ccee---
Q 041332 201 ISCVILVGLFSLQHHGTHRVAF---IFAPIVTTWLLCISSIGIYNIFQWNPHIFNALSPVYMLKFFRSTG---IDGW--- 271 (753)
Q Consensus 201 is~~ILv~LF~iQ~~GT~kvg~---~FgPIml~WF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~---~~g~--- 271 (753)
++.++++++..+.-+|....++ .+.=+.++=.+.+.++|+.-+..-+|.--... ...++..++ ..||
T Consensus 147 ~~~~~~~l~~~iN~~gvk~~~~i~~~~~~iki~~l~~~ii~~i~~~~~~~~~~~~~~----~f~~~~~~~~~~p~g~~~~ 222 (499)
T PRK15049 147 FALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLVVGTVFLGSGQPLDGNTT----GFHLITDNGGFFPHGLLPA 222 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCc----ccccccCCCCcccccHHHH
Confidence 4677777888889898776665 44433322233333444443322111100000 011111111 1122
Q ss_pred e-eecceeeeecchhh--hhccCCCCCccchhhhhhHhHHHHHHHhhcchhhHhh-----cCcCcccCccccccc----c
Q 041332 272 I-SLGGVVLSITGVET--MFADLGHFSSLSIKVAFTFLVYPCLILAYMGEAAFLT-----KHHEDIQRSFYKAIP----E 339 (753)
Q Consensus 272 ~-~LG~V~L~iTGaEA--LyADmGHFg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll-----~~p~~~~npFf~~~P----~ 339 (753)
. .+..++.+.+|-|. ..|+==+--+|+|-+|-.. +.-...+.|++-...+. ++.+....||....- +
T Consensus 223 ~~~~~~~~faf~G~e~i~~~aeE~knP~r~iPrAi~~-~~~~i~~~yi~~~~~~~~~~p~~~~~~~~sP~~~~~~~~g~~ 301 (499)
T PRK15049 223 LVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINS-VIWRIGLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGVP 301 (499)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHhcChhhHHHHHHHH-HHHHHHHHHHHHHHHHheecchhccCcCCCHHHHHHHHcCch
Confidence 1 12246677788774 3444445566777777643 22233333555332222 122334567643221 1
Q ss_pred cchHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHhcCCCccc
Q 041332 340 AVFWPVFIVATFAAIVGSQAVISATFSIISQCCALNCFPSV 380 (753)
Q Consensus 340 ~~~~P~~vlAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~ 380 (753)
++-.-+.++..+|.+-+..+.+.++--+....-+-|.+|+.
T Consensus 302 ~~~~ii~~~ilia~~ss~ns~~~~~sR~l~a~Ardg~lP~~ 342 (499)
T PRK15049 302 YIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSF 342 (499)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHH
Confidence 11111222222222222223344444445555577999954
No 13
>TIGR00909 2A0306 amino acid transporter.
Probab=79.66 E-value=9 Score=42.84 Aligned_cols=167 Identities=16% Similarity=0.116 Sum_probs=81.7
Q ss_pred ehhHHHHHHHHhhhhccccchhh---hhhhHHHHHHHHHHHHHHHhhcccCcceeeecCHHHHHHHHHhcCccee-eeec
Q 041332 200 LISCVILVGLFSLQHHGTHRVAF---IFAPIVTTWLLCISSIGIYNIFQWNPHIFNALSPVYMLKFFRSTGIDGW-ISLG 275 (753)
Q Consensus 200 ~is~~ILv~LF~iQ~~GT~kvg~---~FgPIml~WF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f~~~~~~~g~-~~LG 275 (753)
.++++++++...+..+|....++ .++.+.++=++.+.+.|+.+. ++.-+..+.|. +..++ ..+.
T Consensus 135 ~~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~~~ 202 (429)
T TIGR00909 135 LPALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHF---ASNNYTPFMPM---------GFGGVGAATA 202 (429)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhC---cHHhcCCCCCC---------cHHHHHHHHH
Confidence 35677778888899989765554 666665554444444554432 22222222221 11121 1233
Q ss_pred ceeeeecchhhhhc--cCCCCCccchhhhhhHhHHHHHHHhhcchhhHhhcC-c-C---cccCccc----ccccccchHH
Q 041332 276 GVVLSITGVETMFA--DLGHFSSLSIKVAFTFLVYPCLILAYMGEAAFLTKH-H-E---DIQRSFY----KAIPEAVFWP 344 (753)
Q Consensus 276 ~V~L~iTGaEALyA--DmGHFg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~-p-~---~~~npFf----~~~P~~~~~P 344 (753)
..+.+.+|=|+.-. +-=+-.+|.+.+|-..-+.-+. +.|+.-....... | + ..++|+. +...++..+-
T Consensus 203 ~~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~~~~-v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (429)
T TIGR00909 203 LVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLIVVT-LLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGGLI 281 (429)
T ss_pred HHHHHHhhHHHHHhhHHhccCccccccHHHHHHHHHHH-HHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHHHH
Confidence 35566677776543 3334455667766654222222 2254443333221 1 1 1223442 2233444444
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhHHHHHHhcCCCcc
Q 041332 345 VFIVATFAAIVGSQAVISATFSIISQCCALNCFPS 379 (753)
Q Consensus 345 ~~vlAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr 379 (753)
+.+.+.++..-+..+.+.+.==+....-+.|.+|+
T Consensus 282 ~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~ 316 (429)
T TIGR00909 282 LTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPG 316 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcH
Confidence 44444444444444444444444555558899997
No 14
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=78.45 E-value=28 Score=39.85 Aligned_cols=121 Identities=12% Similarity=0.069 Sum_probs=53.5
Q ss_pred hhHHHHHHHHhhhhccccchhhh---hhhH-HHHHHHHHHHHHHHhhcc-cCcceeeecCHHHHHHHHHh-cCcceeeee
Q 041332 201 ISCVILVGLFSLQHHGTHRVAFI---FAPI-VTTWLLCISSIGIYNIFQ-WNPHIFNALSPVYMLKFFRS-TGIDGWISL 274 (753)
Q Consensus 201 is~~ILv~LF~iQ~~GT~kvg~~---FgPI-ml~WF~~l~~~Gi~~I~~-~~P~Vl~AlnP~yai~f~~~-~~~~g~~~L 274 (753)
++++++.++-.++-+|.+..|++ ++=+ .++=++.+.++|+..... ..+.. ..+ + -+++-. .+..++...
T Consensus 126 ~~l~~~~~~~~in~~gv~~~~~i~~~~~~~~~ii~~~~~ii~~~~~~~~g~~~~~--~~~--~-~~~~p~~~~~~~~~~~ 200 (474)
T TIGR03813 126 SVLFVYWLATFIALRGVAAFTKVAKWGGIVGTIIPAAILVILGISYLLTGGESQI--PLR--W-DDAFPDFTNFDNVVLA 200 (474)
T ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC--CCC--H-HHhCCCccccccHHHH
Confidence 44555555667899998755443 2111 112223333445443222 11211 011 0 012211 122333333
Q ss_pred cceeeeecchhhh--hccCCCCCccchhhhhhHhHHHHHHHhhcchhhHhhcCc
Q 041332 275 GGVVLSITGVETM--FADLGHFSSLSIKVAFTFLVYPCLILAYMGEAAFLTKHH 326 (753)
Q Consensus 275 G~V~L~iTGaEAL--yADmGHFg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p 326 (753)
++++.+.+|-|.. +|+==+--+|.+-+|-..-+.-+.++-.+++-++...-|
T Consensus 201 ~~~~~af~G~e~~~~~a~E~knP~r~iPrAi~~~~~~~~~~y~l~~~~~~~~~~ 254 (474)
T TIGR03813 201 ASIFLFYAGMEMNAVHVKDVDNPDKNYPIAILIAALGTVLIFVLGTLAIAFIIP 254 (474)
T ss_pred HHHHHHHhchhHhHHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 4456678888743 444334556666666555444444444444444443333
No 15
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=78.33 E-value=41 Score=38.13 Aligned_cols=23 Identities=13% Similarity=0.034 Sum_probs=17.3
Q ss_pred hhHHHHHHHHhhhhccccchhhh
Q 041332 201 ISCVILVGLFSLQHHGTHRVAFI 223 (753)
Q Consensus 201 is~~ILv~LF~iQ~~GT~kvg~~ 223 (753)
++++++..+..+..+|+...+++
T Consensus 124 ~~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 124 ACIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH
Confidence 34566667888999999877765
No 16
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=74.53 E-value=22 Score=40.75 Aligned_cols=25 Identities=16% Similarity=-0.114 Sum_probs=18.3
Q ss_pred eehhHHHHHHHHhhhhccccchhhh
Q 041332 199 VLISCVILVGLFSLQHHGTHRVAFI 223 (753)
Q Consensus 199 v~is~~ILv~LF~iQ~~GT~kvg~~ 223 (753)
..+.+++++++..+.-+|....++.
T Consensus 144 ~~i~~~~~~~~~~in~~g~k~~~~~ 168 (482)
T TIGR00907 144 FGIMIGIHLIHALINSLPTKWLPRI 168 (482)
T ss_pred hhhHHHHHHHHHHHHHhhHhHHHHH
Confidence 4566777888888899987655544
No 17
>TIGR00930 2a30 K-Cl cotransporter.
Probab=73.59 E-value=83 Score=40.04 Aligned_cols=25 Identities=16% Similarity=0.210 Sum_probs=18.7
Q ss_pred EeehhHHHHHHHHhhhhccccchhh
Q 041332 198 VVLISCVILVGLFSLQHHGTHRVAF 222 (753)
Q Consensus 198 vv~is~~ILv~LF~iQ~~GT~kvg~ 222 (753)
+-.++++++++++.+--+|....++
T Consensus 203 ~~iia~i~l~ll~~In~~Gvk~~ak 227 (953)
T TIGR00930 203 IRIYGTVTVVVLLGISFAGMEWENK 227 (953)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHH
Confidence 3457778888888899999865554
No 18
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=68.55 E-value=74 Score=36.44 Aligned_cols=45 Identities=7% Similarity=-0.183 Sum_probs=30.2
Q ss_pred cccccchHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHhcCCCccc
Q 041332 336 AIPEAVFWPVFIVATFAAIVGSQAVISATFSIISQCCALNCFPSV 380 (753)
Q Consensus 336 ~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~ 380 (753)
...+|..+.+.+.+.++++-+..+.+.++=-+..+.-+-|.+|+.
T Consensus 273 ~~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 273 MVGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred HcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 344565555555566666666666666666667777789999964
No 19
>PRK10655 potE putrescine transporter; Provisional
Probab=66.71 E-value=80 Score=35.64 Aligned_cols=43 Identities=19% Similarity=0.016 Sum_probs=25.0
Q ss_pred ehhHHHHHHHHhhhhccccchhhh---hhhHHHHHHHHHHHHHHHh
Q 041332 200 LISCVILVGLFSLQHHGTHRVAFI---FAPIVTTWLLCISSIGIYN 242 (753)
Q Consensus 200 ~is~~ILv~LF~iQ~~GT~kvg~~---FgPIml~WF~~l~~~Gi~~ 242 (753)
.+++++++.+..+.-+|....+++ ..-.+++-++.+.+.|++.
T Consensus 125 ~~~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~~ 170 (438)
T PRK10655 125 LATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWFW 170 (438)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666677888999998766664 2333334344444555443
No 20
>PRK11021 putative transporter; Provisional
Probab=60.20 E-value=1.4e+02 Score=33.36 Aligned_cols=172 Identities=15% Similarity=0.147 Sum_probs=76.8
Q ss_pred EeehhHHHHHHHHhhhhccccchhhhhhhHHHHHHHHHHHHHHHhhc-ccCcceeeecCHHHHHHHHHhcCccee-eeec
Q 041332 198 VVLISCVILVGLFSLQHHGTHRVAFIFAPIVTTWLLCISSIGIYNIF-QWNPHIFNALSPVYMLKFFRSTGIDGW-ISLG 275 (753)
Q Consensus 198 vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIml~WF~~l~~~Gi~~I~-~~~P~Vl~AlnP~yai~f~~~~~~~g~-~~LG 275 (753)
..++++++++.+..+.-+|.+..+++-.=+. ++.+.++++.-.. +.+++-+ .+++ +..++..++ ..+.
T Consensus 115 ~~~~~~~~~~~~~~ln~~Gv~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~ 184 (410)
T PRK11021 115 LLLAELLTLALLWLLNLRGASSSANLQTVIA---LLIVALVVAIWWAGDIKPADI-PFPA------PGSIEWSGLFAALG 184 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH---HHHHHHHHHHHHHcCCchhcC-CCCC------CCCccHHHHHHHHH
Confidence 3467788888889999999888877543211 1122222222111 1122211 0110 001122222 2234
Q ss_pred ceeeeecchhhh--hccCCCCCccchhhhhhHhHHHHHHHhhcchhhHhh-----cCcCcccCcc----cccccccchHH
Q 041332 276 GVVLSITGVETM--FADLGHFSSLSIKVAFTFLVYPCLILAYMGEAAFLT-----KHHEDIQRSF----YKAIPEAVFWP 344 (753)
Q Consensus 276 ~V~L~iTGaEAL--yADmGHFg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll-----~~p~~~~npF----f~~~P~~~~~P 344 (753)
..+.+.+|-|+. +|+==+-.+|.|.+|-..-+.-+ .+-|+.-...++ ++++....|+ .+...++..+-
T Consensus 185 ~~~~af~G~e~~~~~a~E~k~P~k~iPrAi~~~~~~~-~~lYil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i 263 (410)
T PRK11021 185 VMFWCFVGIEAFAHLASEFKNPERDFPRALMIGLLLA-GLVYWACTVVVLHFPAYGDKQAAAASLPGIFVQLFGGYALWV 263 (410)
T ss_pred HHHHHHhcHHHHHhhHHhccCccccccHHHHHHHHHH-HHHHHHHHHHHHhcCCCcchhhccccHHHHHHHHhCchhHHH
Confidence 456677887764 44444556677777665533322 333554433222 1121122342 22223333222
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhHHHHHHhcCCCccc
Q 041332 345 VFIVATFAAIVGSQAVISATFSIISQCCALNCFPSV 380 (753)
Q Consensus 345 ~~vlAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~ 380 (753)
+.+++.++++-+-.+.+.+.=-+....-+-|.+||.
T Consensus 264 i~i~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~~ 299 (410)
T PRK11021 264 ICVIGYLACFASVNIYTQSFARLVWSQAREGRPPSY 299 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHH
Confidence 222233333223333333333344555578999964
No 21
>PRK10249 phenylalanine transporter; Provisional
Probab=58.82 E-value=84 Score=35.97 Aligned_cols=114 Identities=20% Similarity=0.262 Sum_probs=58.5
Q ss_pred hhHHHHHHHHhhhhccccchhhh---hhhHHHHHHHHHHHHHHHhhcccCcceeeecCHHHHHHH--HHhcCcce-eeee
Q 041332 201 ISCVILVGLFSLQHHGTHRVAFI---FAPIVTTWLLCISSIGIYNIFQWNPHIFNALSPVYMLKF--FRSTGIDG-WISL 274 (753)
Q Consensus 201 is~~ILv~LF~iQ~~GT~kvg~~---FgPIml~WF~~l~~~Gi~~I~~~~P~Vl~AlnP~yai~f--~~~~~~~g-~~~L 274 (753)
++.++++++.++.-+|....+++ +.=+-++..+.+.++|+.-+...++. ...++.+.... +..++..| +..+
T Consensus 138 ~~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~ 215 (458)
T PRK10249 138 WAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGG--EKASIDNLWRYGGFFATGWNGLILSL 215 (458)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC--CCCChhhccCCCCCCCCcHHHHHHHH
Confidence 45667777788888888766653 33333445555555666544331221 01121110000 00122233 3445
Q ss_pred cceeeeecchhhh--hccCCCCCccchhhhhhHhHHHHHHHhhcc
Q 041332 275 GGVVLSITGVETM--FADLGHFSSLSIKVAFTFLVYPCLILAYMG 317 (753)
Q Consensus 275 G~V~L~iTGaEAL--yADmGHFg~~~Ir~aw~~~V~PaL~LnY~G 317 (753)
..++.+.+|-|.. .|+=-+-.+|.|-+|-.. ..-...+-|++
T Consensus 216 ~~~~~af~G~e~~~~~a~E~~~P~k~iPrai~~-~~~~~~~~y~~ 259 (458)
T PRK10249 216 AVIMFSFGGLELIGITAAEARDPEKSIPKAVNQ-VVYRILLFYIG 259 (458)
T ss_pred HHHHHHHcCHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHH
Confidence 5567778888865 666556677777766554 22334444444
No 22
>PRK10746 putative transport protein YifK; Provisional
Probab=57.20 E-value=1.8e+02 Score=33.48 Aligned_cols=30 Identities=3% Similarity=0.086 Sum_probs=21.2
Q ss_pred ccccHhHHHHHHHhhcceeecccCcchhHHHHhhcc
Q 041332 18 KRVSCTTVVSLAYQSLGVVYGDLSTSPLYVYKTAFS 53 (753)
Q Consensus 18 ~~~~w~~~~~La~~alGVVyGDIGTSPLY~~~~~f~ 53 (753)
++.+.|+...+++++. |||.-+..-+..+.
T Consensus 10 r~L~~~~~~~i~ig~~------IGtGlf~~~g~~l~ 39 (461)
T PRK10746 10 RGLEARHIELIALGGT------IGVGLFMGAASTLK 39 (461)
T ss_pred ccCcHHHHHHHHHHhh------hhhhHHHHhHHHHH
Confidence 3445566766776655 99998888887774
No 23
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=53.93 E-value=2.1e+02 Score=34.02 Aligned_cols=45 Identities=22% Similarity=0.293 Sum_probs=26.8
Q ss_pred EeehhHHHHHHHHhhhhccccchhh---hhhhHHHHHHHHHHHHHHHh
Q 041332 198 VVLISCVILVGLFSLQHHGTHRVAF---IFAPIVTTWLLCISSIGIYN 242 (753)
Q Consensus 198 vv~is~~ILv~LF~iQ~~GT~kvg~---~FgPIml~WF~~l~~~Gi~~ 242 (753)
...+++++++++..+--+|+...++ .+.-+-++-++.+.+.|+..
T Consensus 161 ~~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~~ 208 (557)
T TIGR00906 161 PDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTK 208 (557)
T ss_pred chHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHhh
Confidence 3446777777778888899766655 34444333344444555543
No 24
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=52.79 E-value=1e+02 Score=34.85 Aligned_cols=24 Identities=17% Similarity=0.243 Sum_probs=17.6
Q ss_pred ehhHHHHHHHHhhhhccccchhhh
Q 041332 200 LISCVILVGLFSLQHHGTHRVAFI 223 (753)
Q Consensus 200 ~is~~ILv~LF~iQ~~GT~kvg~~ 223 (753)
.+++++++.+..+.-+|.+..+++
T Consensus 123 ~~~~~~~~~~~~ln~~g~~~~~~i 146 (442)
T TIGR00908 123 LAALVFYIVFIGINILGVGEAAKL 146 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 356666777788888898777764
No 25
>PRK10580 proY putative proline-specific permease; Provisional
Probab=52.29 E-value=1.2e+02 Score=34.59 Aligned_cols=25 Identities=16% Similarity=0.173 Sum_probs=19.1
Q ss_pred CCccHHHHHHHHHhhhhhhhhhhHH
Q 041332 477 EGGWIPLVLSFIFMAVMYIWNYGTM 501 (753)
Q Consensus 477 ~GGW~pl~ia~~~~~iM~~W~~G~~ 501 (753)
.+.++.+.++.+.+.+.+.++.-.+
T Consensus 423 p~~~~~~~~~~~~~~~~~~~y~~~~ 447 (457)
T PRK10580 423 PDTRISLYVGFAWIVLLLIGWMFKR 447 (457)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3577788888888888888876543
No 26
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=51.05 E-value=1e+02 Score=35.39 Aligned_cols=43 Identities=5% Similarity=-0.099 Sum_probs=24.8
Q ss_pred ccccchHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHhcCCCcc
Q 041332 337 IPEAVFWPVFIVATFAAIVGSQAVISATFSIISQCCALNCFPS 379 (753)
Q Consensus 337 ~P~~~~~P~~vlAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr 379 (753)
..++...-+.+.+.+++.-+.-+.+.+.--+..+.-+-|.+||
T Consensus 278 ~g~~~~~~i~i~~~is~~~~~~~~~~~~sR~~~amardg~lP~ 320 (473)
T TIGR00905 278 VGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPK 320 (473)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH
Confidence 3444444333334444444445556666556666778999997
No 27
>PRK10238 aromatic amino acid transporter; Provisional
Probab=51.04 E-value=1.1e+02 Score=34.93 Aligned_cols=115 Identities=19% Similarity=0.239 Sum_probs=55.0
Q ss_pred hhHHHHHHHHhhhhccccchhhh---hhhHHHHHHHHHHHHHHHhhccc--Ccc-eeeecCHHHHHHHHHhcCccee-ee
Q 041332 201 ISCVILVGLFSLQHHGTHRVAFI---FAPIVTTWLLCISSIGIYNIFQW--NPH-IFNALSPVYMLKFFRSTGIDGW-IS 273 (753)
Q Consensus 201 is~~ILv~LF~iQ~~GT~kvg~~---FgPIml~WF~~l~~~Gi~~I~~~--~P~-Vl~AlnP~yai~f~~~~~~~g~-~~ 273 (753)
..++++++++.+.-+|+...+++ +.-+-++-++.+-++|+.-+... .|. .+.-+.+. .-+..++..++ ..
T Consensus 129 ~~~i~~~~~~~lN~~gv~~~~~~~~~~~~iki~~i~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~ 205 (456)
T PRK10238 129 SAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQ---GGFLPHGFTGLVMM 205 (456)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccCCC---CCCccccHHHHHHH
Confidence 45566677788888898766652 22332322333333344332220 221 11111000 00011122222 23
Q ss_pred ecceeeeecchhh--hhccCCCCCccchhhhhhHhHHHHHHHhhcchh
Q 041332 274 LGGVVLSITGVET--MFADLGHFSSLSIKVAFTFLVYPCLILAYMGEA 319 (753)
Q Consensus 274 LG~V~L~iTGaEA--LyADmGHFg~~~Ir~aw~~~V~PaL~LnY~GQg 319 (753)
++.++.+.+|-|. ..|.=-+-.+|.+-+|-.. +...+.+.|++=-
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~~~ 252 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIGSL 252 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHHHH
Confidence 4556777888887 4455446667778777643 3445555566533
No 28
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=50.89 E-value=48 Score=34.16 Aligned_cols=21 Identities=14% Similarity=0.452 Sum_probs=17.1
Q ss_pred CccHHHHHHHHHhhhhhhhhh
Q 041332 478 GGWIPLVLSFIFMAVMYIWNY 498 (753)
Q Consensus 478 GGW~pl~ia~~~~~iM~~W~~ 498 (753)
.+|+-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999988766654
No 29
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=50.15 E-value=2.8e+02 Score=32.40 Aligned_cols=46 Identities=15% Similarity=0.185 Sum_probs=25.2
Q ss_pred ceeeeecchhhh--hccCCCCCccchhhhhhHhHHHHHHHhhcchhhH
Q 041332 276 GVVLSITGVETM--FADLGHFSSLSIKVAFTFLVYPCLILAYMGEAAF 321 (753)
Q Consensus 276 ~V~L~iTGaEAL--yADmGHFg~~~Ir~aw~~~V~PaL~LnY~GQgA~ 321 (753)
+++.+.+|-|+. +|+==+--+|.+-+|-...+.-+.++.++|--++
T Consensus 202 ~~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~~~~i 249 (507)
T TIGR00910 202 AFIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIGGFSI 249 (507)
T ss_pred HHHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHHHHHH
Confidence 345567888865 4554455566666665554444444444444333
No 30
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=48.74 E-value=1.3e+02 Score=34.10 Aligned_cols=23 Identities=17% Similarity=0.184 Sum_probs=16.4
Q ss_pred hhHHHHHHHHhhhhccccchhhh
Q 041332 201 ISCVILVGLFSLQHHGTHRVAFI 223 (753)
Q Consensus 201 is~~ILv~LF~iQ~~GT~kvg~~ 223 (753)
+.+++++.+..+.-+|+...+++
T Consensus 128 ~~~~~~~~~~~ln~~gvk~~~~i 150 (445)
T PRK10644 128 TCVVVLWIFVLLNIVGPKMITRV 150 (445)
T ss_pred HHHHHHHHHHHHHHhchHHHHHH
Confidence 45566667788888898776663
No 31
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=47.55 E-value=1.5e+02 Score=33.70 Aligned_cols=44 Identities=9% Similarity=0.207 Sum_probs=25.7
Q ss_pred ehhHHHHHHHHhhhhcccc---chhhhhhhHHHHHHHHHHHHHHHhh
Q 041332 200 LISCVILVGLFSLQHHGTH---RVAFIFAPIVTTWLLCISSIGIYNI 243 (753)
Q Consensus 200 ~is~~ILv~LF~iQ~~GT~---kvg~~FgPIml~WF~~l~~~Gi~~I 243 (753)
.+++++++.+..+.-+|.+ |+...+.=+.++=++.+.++|+..+
T Consensus 129 ~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~~ 175 (445)
T PRK11357 129 FIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWF 175 (445)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4566666777788989876 4444444334444444555666543
No 32
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=46.33 E-value=95 Score=33.64 Aligned_cols=54 Identities=20% Similarity=0.273 Sum_probs=38.6
Q ss_pred hhhhhhhheeehhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH----HHHHHHHH
Q 041332 417 NMIGHAYGLAVTTVMLVTTCLMGQVMITVWKQRIFIVVAFLLFFGS----VELLYISA 470 (753)
Q Consensus 417 ~~la~AYGiAVt~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~----id~~ff~a 470 (753)
.+-=..||.+|-.|.++.++-++..+....+.+.+.++++.++++. +|-..+++
T Consensus 12 r~k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss 69 (301)
T PF14362_consen 12 RNKYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSS 69 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3344578888988999888888888888888887776666655554 45544444
No 33
>TIGR01773 GABAperm gamma-aminobutyrate permease. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity.
Probab=43.10 E-value=4.9e+02 Score=29.55 Aligned_cols=176 Identities=16% Similarity=0.118 Sum_probs=77.2
Q ss_pred ehhHHHHHHHHhhhhccccchhhhhhh---HHHHHHHHHHHHHHHhhcccCcce----eeecCHHHHHHHHHhcCcce-e
Q 041332 200 LISCVILVGLFSLQHHGTHRVAFIFAP---IVTTWLLCISSIGIYNIFQWNPHI----FNALSPVYMLKFFRSTGIDG-W 271 (753)
Q Consensus 200 ~is~~ILv~LF~iQ~~GT~kvg~~FgP---Iml~WF~~l~~~Gi~~I~~~~P~V----l~AlnP~yai~f~~~~~~~g-~ 271 (753)
.+++++++.+..+.-+|+...+++--. +.++-++.+.++|+..+..++|.. +.-+.+.-. +..++..+ +
T Consensus 128 ~~~~~~~~~~~~~n~~gv~~~~~~~~~~~~~ki~~l~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~ 204 (452)
T TIGR01773 128 LFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIILGAVAIFGFAPGSEVSGFSNLTGKGG---FFPNGIGAVL 204 (452)
T ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCccccccCCCC---cCcccHHHHH
Confidence 356666777778888998777765433 223333333445555443323321 111100000 00111111 1
Q ss_pred eeecceeeeecchhhh--hccCCCCCccchhhhhhHhHHHHHHHhhcchhhHhhc-Cc----Cccc-Ccccc---cc-cc
Q 041332 272 ISLGGVVLSITGVETM--FADLGHFSSLSIKVAFTFLVYPCLILAYMGEAAFLTK-HH----EDIQ-RSFYK---AI-PE 339 (753)
Q Consensus 272 ~~LG~V~L~iTGaEAL--yADmGHFg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~-~p----~~~~-npFf~---~~-P~ 339 (753)
..+...+.+.+|-|+. +|+-=+--+|.|..|-.. +.....+.|+.=-..... -| +..+ .||-. .. .+
T Consensus 205 ~a~~~~~~af~G~e~~~~~a~E~k~P~r~iPrAi~~-~~~~~~~~y~l~~~~~~~~~p~~~~~~~~~~p~~~~~~~~g~~ 283 (452)
T TIGR01773 205 LAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNS-VIWRIIVFYLGSIFIVVALLPWNSPNLLEVGSYVAVLELLGIP 283 (452)
T ss_pred HHHHHHHHHhccHHHHhHHHHhhcChhhHHHHHHHH-HHHHHHHHHHHHHHHHeeEeCCCCcccccCCcHHHHHHHcCCh
Confidence 2333456677788864 233334445667777532 223334445553222221 12 2112 26532 11 12
Q ss_pred cchHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHhcCCCcc
Q 041332 340 AVFWPVFIVATFAAIVGSQAVISATFSIISQCCALNCFPS 379 (753)
Q Consensus 340 ~~~~P~~vlAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr 379 (753)
+..+-+.+++.++.+-+..+.+.++=-+....-+-|.+|+
T Consensus 284 ~~~~ii~~~~~~~~~~~~~~~~~~~sR~~~a~ardg~lP~ 323 (452)
T TIGR01773 284 HAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPR 323 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCH
Confidence 2222222222233333334444444445555668899995
No 34
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=41.27 E-value=22 Score=37.68 Aligned_cols=32 Identities=31% Similarity=0.656 Sum_probs=26.8
Q ss_pred cccCCccHHHHHHHHHhhhhhhhhhhHHHHHh
Q 041332 474 KIPEGGWIPLVLSFIFMAVMYIWNYGTMKKHD 505 (753)
Q Consensus 474 Ki~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~ 505 (753)
|=.+|||..++.+.++..+..+|+|--+.+.+
T Consensus 257 ~~i~~G~isiv~Gliiv~iLii~N~kvEv~AR 288 (304)
T COG4059 257 VSIQGGWISIVAGLIIVLILIIWNRKVEVKAR 288 (304)
T ss_pred cccccchhhhHHHHHHHHHHHHhcchhhhhhh
Confidence 34589999999999999999999986666543
No 35
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=37.91 E-value=1.8e+02 Score=33.34 Aligned_cols=106 Identities=13% Similarity=0.055 Sum_probs=51.3
Q ss_pred eecceeeeecchhhh--hccCCCCCccchhhhhhHhHHHHHHHhhcchhhHhhc--CcCc---ccCccccc----ccccc
Q 041332 273 SLGGVVLSITGVETM--FADLGHFSSLSIKVAFTFLVYPCLILAYMGEAAFLTK--HHED---IQRSFYKA----IPEAV 341 (753)
Q Consensus 273 ~LG~V~L~iTGaEAL--yADmGHFg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~--~p~~---~~npFf~~----~P~~~ 341 (753)
.+..++.+.+|-|+. .|.==+-.+|+|.+|-.. +.-...+-|+-....+.. .+++ .++||-.. --++.
T Consensus 216 ~~~~~~~af~G~e~~~~~a~E~knP~r~iPrai~~-~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 294 (469)
T PRK11049 216 GFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINS-IPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAA 294 (469)
T ss_pred HHHHHHHHHhcHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChhH
Confidence 334456667787754 333335566777777642 333334445544443322 2222 23565322 11222
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHhcCCCcc
Q 041332 342 FWPVFIVATFAAIVGSQAVISATFSIISQCCALNCFPS 379 (753)
Q Consensus 342 ~~P~~vlAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr 379 (753)
..-+.+++.++.+-+..+.+.+.=-+....-+-|.+|+
T Consensus 295 ~~~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~ 332 (469)
T PRK11049 295 ASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPK 332 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 22233333334444444444454455555668899995
No 36
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]
Probab=37.04 E-value=61 Score=35.98 Aligned_cols=37 Identities=24% Similarity=0.591 Sum_probs=28.1
Q ss_pred HhcCcceeeeecceeeeecchhh-----------------hhccCCCCCccchhh
Q 041332 264 RSTGIDGWISLGGVVLSITGVET-----------------MFADLGHFSSLSIKV 301 (753)
Q Consensus 264 ~~~~~~g~~~LG~V~L~iTGaEA-----------------LyADmGHFg~~~Ir~ 301 (753)
.|....|| +.|+|+|=+|||-| .|+|+|-||-.=+.+
T Consensus 288 tRKSt~gw-sIgnIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~vSi 341 (372)
T KOG3145|consen 288 TRKSTVGW-SIGNILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLVSI 341 (372)
T ss_pred eecccccc-ccccEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhHHH
Confidence 34445676 67999999999965 689999999665443
No 37
>TIGR00913 2A0310 amino acid permease (yeast).
Probab=36.32 E-value=3.9e+02 Score=30.55 Aligned_cols=102 Identities=13% Similarity=0.055 Sum_probs=48.5
Q ss_pred eeeeecchhhh--hccCCCCCccchhhhhhHhHHHHHHHhhcchhhHh-hcCc-C------------cccCccccc---c
Q 041332 277 VVLSITGVETM--FADLGHFSSLSIKVAFTFLVYPCLILAYMGEAAFL-TKHH-E------------DIQRSFYKA---I 337 (753)
Q Consensus 277 V~L~iTGaEAL--yADmGHFg~~~Ir~aw~~~V~PaL~LnY~GQgA~l-l~~p-~------------~~~npFf~~---~ 337 (753)
++.+.+|-|+. +|+==+-.+|.|-+|-..-+.-+ .+-|+.....+ ..-| + ....||... .
T Consensus 206 ~~~af~G~e~~~~~a~E~knP~r~iPrai~~~~~~~-~~~Y~l~~~~~~~~~p~~~~~l~~~~~~~~~~~~p~~~~~~~~ 284 (478)
T TIGR00913 206 AAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRI-LVFYILTLFLIGFLVPYNDPRLLSSSSSSDSAASPFVIAIQNH 284 (478)
T ss_pred HHhhhccHHHHHHHHHhhcChhhHHHHHHHHHHHHH-HHHHHHHHHHheeeccCCChhhcccccCCCcCCCcHHHHHHHc
Confidence 45677787753 45555666777777654423222 33355543221 1112 1 012565421 1
Q ss_pred c-ccchHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHhcCCCcc
Q 041332 338 P-EAVFWPVFIVATFAAIVGSQAVISATFSIISQCCALNCFPS 379 (753)
Q Consensus 338 P-~~~~~P~~vlAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr 379 (753)
- ++...-+.+.+.++.+-+..+.+.++=-++.+.-+-|.+|+
T Consensus 285 g~~~~~~~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~ 327 (478)
T TIGR00913 285 GIKVLPHIFNAVILISVLSAANSSLYASSRTLYALAHQGLAPK 327 (478)
T ss_pred CCchHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCcccH
Confidence 1 23222233333333333334444444455666668899996
No 38
>PRK11387 S-methylmethionine transporter; Provisional
Probab=34.67 E-value=6.6e+02 Score=28.83 Aligned_cols=21 Identities=19% Similarity=0.088 Sum_probs=13.5
Q ss_pred hHHHHHHHHhhhhccccchhh
Q 041332 202 SCVILVGLFSLQHHGTHRVAF 222 (753)
Q Consensus 202 s~~ILv~LF~iQ~~GT~kvg~ 222 (753)
.+++++.+..+.-+|....++
T Consensus 133 ~~~~~~~~~~in~~gvk~~~~ 153 (471)
T PRK11387 133 CLLFCALIFGLNVVSTRFFAE 153 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHH
Confidence 344455667778888776554
No 39
>KOG4742 consensus Predicted chitinase [General function prediction only]
Probab=32.33 E-value=21 Score=39.09 Aligned_cols=34 Identities=15% Similarity=0.268 Sum_probs=25.7
Q ss_pred cCCCCCccchhhhhhHhHHHHHHHhhcchhh-----HhhcCcCccc-Cc
Q 041332 290 DLGHFSSLSIKVAFTFLVYPCLILAYMGEAA-----FLTKHHEDIQ-RS 332 (753)
Q Consensus 290 DmGHFg~~~Ir~aw~~~V~PaL~LnY~GQgA-----~ll~~p~~~~-np 332 (753)
+=++|||.+||++|=+ ..||+. =||+|||-+. ||
T Consensus 171 gk~Y~GRG~iQlsWNy---------NYG~ag~alg~dLL~~Pe~V~~np 210 (286)
T KOG4742|consen 171 GKSYYGRGPIQLSWNY---------NYGAAGKALGLDLLRNPELVAMNP 210 (286)
T ss_pred CCcccccCcccccccc---------cccHhHhhcCchhhcCcchhccCc
Confidence 4579999999999987 445543 4778998765 55
No 40
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=28.76 E-value=46 Score=38.55 Aligned_cols=105 Identities=19% Similarity=0.202 Sum_probs=65.2
Q ss_pred hhhhhhhhhHHH-HHHhcCCCccceEEecCCccCC----ceeehhhHHHHHHHhheeeEeecCchhhhhhhheeehhHHH
Q 041332 358 QAVISATFSIIS-QCCALNCFPSVKIIHTSSKIYG----QIYIPEVNWMLMCLCLAVTIGLRDTNMIGHAYGLAVTTVML 432 (753)
Q Consensus 358 QA~Isg~FSl~~-Qai~Lg~~Pr~~I~hTS~~~~G----QIYIP~vNw~Lmi~~i~vv~~F~~S~~la~AYGiAVt~~M~ 432 (753)
|=.|.+.+...+ +.-..|-.||+.+...=+...| |+|+|.+= +-.+-=|-.-=|-++-++=-.++||.+..
T Consensus 209 qFti~~~~~~s~~~~~sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L----iVilSWVSFWin~~a~pARv~lGITTVLT 284 (459)
T KOG3643|consen 209 QFTITEYHVTSRLVSFSTGNYSRLSLSFQLRRNIGFYILQTYIPSTL----IVILSWVSFWINRDASPARVALGITTVLT 284 (459)
T ss_pred ceEEEEEEEEEEEEEEccccceeEEEEEEEEeeccEEEEeeecchhh----hhHHhHhHhhhccccchhheeeceehHHh
Confidence 445555554422 2234899999999988888787 99999862 11112222233556667778999999999
Q ss_pred HHHHHHHHHHH-----HHhhhhhHHHHHHHHHHHH-HHHH
Q 041332 433 VTTCLMGQVMI-----TVWKQRIFIVVAFLLFFGS-VELL 466 (753)
Q Consensus 433 iTT~L~~~v~~-----~~w~~~~~~~~~~~~~f~~-id~~ 466 (753)
|||++...=.- ++.-.-..+.++|+.+|++ +|-+
T Consensus 285 MTTl~t~~n~slPrvSYVKAiDiYL~vCFvfVF~sLLEYA 324 (459)
T KOG3643|consen 285 MTTLMTSTNESLPRVSYVKAIDVYLGVCFVFVFLSLLEYA 324 (459)
T ss_pred HHHHHhhhhccCCCccceeeehhhhhHHHHHHHHHHHHHH
Confidence 99998764211 1222334556666666665 4443
No 41
>KOG3788 consensus Predicted divalent cation transporter [Inorganic ion transport and metabolism]
Probab=23.88 E-value=6.1e+02 Score=29.60 Aligned_cols=125 Identities=20% Similarity=0.288 Sum_probs=65.5
Q ss_pred HHHHHhhhhhhhhhHHHHHHhcCCCccceEEecCCccCCceeehhhHHH-------------HHH-HhheeeEeec----
Q 041332 353 AIVGSQAVISATFSIISQCCALNCFPSVKIIHTSSKIYGQIYIPEVNWM-------------LMC-LCLAVTIGLR---- 414 (753)
Q Consensus 353 tIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~-------------Lmi-~~i~vv~~F~---- 414 (753)
+.+.-||.|-| |-..--|+.+|..| +|-.|++-.=-+ ++. .-++++.+=|
T Consensus 112 aLvqvQatvvg-fla~i~a~~lg~~p-----------~~~~~~~~~llL~~SSv~ta~las~vl~~lmv~vIi~srk~~i 179 (441)
T KOG3788|consen 112 ALVQVQATVVG-FLAAIAAIALGIIP-----------EGDFDIEHSLLLCASSVATATLASLVLGILMVVVIIGSRKYDI 179 (441)
T ss_pred HHHHHHHHHHH-HHHHHHHHHhccCc-----------cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccCC
Confidence 34555666665 55555677899998 566776643221 111 1122233322
Q ss_pred CchhhhhhhheeehhHHHHHHHHHHHHH--HHHhhhhhHHHHHHHHHHHHHHH-----HHHHHhhccccCCccHHHHHHH
Q 041332 415 DTNMIGHAYGLAVTTVMLVTTCLMGQVM--ITVWKQRIFIVVAFLLFFGSVEL-----LYISACVYKIPEGGWIPLVLSF 487 (753)
Q Consensus 415 ~S~~la~AYGiAVt~~M~iTT~L~~~v~--~~~w~~~~~~~~~~~~~f~~id~-----~ff~an~~Ki~~GGW~pl~ia~ 487 (753)
|-+|++.=-+ |-.|+|+--++|.++-- +..-+.+.++..+...+|+++-- ++=..-..|+++-||+|+++|.
T Consensus 180 NPDNIatPia-ASlGDl~Tl~~L~~~~~~~~~~~~~~~~l~~~v~~~flal~pvwi~ia~~~~~t~~Vlk~gw~pvi~Am 258 (441)
T KOG3788|consen 180 NPDNIATPIA-ASLGDLLTLSSLAFFGSLFYNASDTSSYLTVLVVVFFLALLPVWIMIAAEDEGTRRVLKQGWEPVIIAM 258 (441)
T ss_pred Cchhhcchhh-hhhhhHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHHhHHHHhhhccCchhhhhHhcccHHHHHHH
Confidence 3455543322 33456665555555433 22233343444455555555322 2223446778899999998887
Q ss_pred HHh
Q 041332 488 IFM 490 (753)
Q Consensus 488 ~~~ 490 (753)
.+-
T Consensus 259 ~IS 261 (441)
T KOG3788|consen 259 MIS 261 (441)
T ss_pred HHH
Confidence 654
No 42
>TIGR03428 ureacarb_perm permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
Probab=23.12 E-value=1.2e+03 Score=26.82 Aligned_cols=25 Identities=24% Similarity=0.314 Sum_probs=17.8
Q ss_pred eehhHHHHHHHHhhhhccccchhhh
Q 041332 199 VLISCVILVGLFSLQHHGTHRVAFI 223 (753)
Q Consensus 199 v~is~~ILv~LF~iQ~~GT~kvg~~ 223 (753)
..++++++++...+.-+|+...+++
T Consensus 145 ~~~~~~~~~~~~~in~~g~k~~~~i 169 (475)
T TIGR03428 145 VLLGSVLLVLTTVINCIGVEWMSRV 169 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 4566667777888888998766553
No 43
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=22.20 E-value=72 Score=25.57 Aligned_cols=29 Identities=28% Similarity=0.705 Sum_probs=15.3
Q ss_pred HHHhhhhhhhhhhHHHHHhhhhhcCCChh
Q 041332 487 FIFMAVMYIWNYGTMKKHDFDMENKVSMD 515 (753)
Q Consensus 487 ~~~~~iM~~W~~G~~~~~~~~~~~~~~l~ 515 (753)
.++|+....|.+-++++.+++....+|++
T Consensus 19 ~~~F~gi~~w~~~~~~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 19 FVFFIGIVIWAYRPRNKKRFEEAANLPLD 47 (49)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHccCcc
Confidence 33344444555554545555556566665
No 44
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=20.84 E-value=84 Score=36.78 Aligned_cols=107 Identities=20% Similarity=0.226 Sum_probs=0.0
Q ss_pred eehhHHHHHHHHhhhhcccc-chhhhhhhHHHHHHHHHHHHH--HHhhcccCcceeeec--CHH-HHHHHHHhcCcceee
Q 041332 199 VLISCVILVGLFSLQHHGTH-RVAFIFAPIVTTWLLCISSIG--IYNIFQWNPHIFNAL--SPV-YMLKFFRSTGIDGWI 272 (753)
Q Consensus 199 v~is~~ILv~LF~iQ~~GT~-kvg~~FgPIml~WF~~l~~~G--i~~I~~~~P~Vl~Al--nP~-yai~f~~~~~~~g~~ 272 (753)
+.++++|++++++.+|+... ++-.=-.--+++|-+.-+++| +|+++. +|+-+..- ||. -++++. +| |+.
T Consensus 28 l~ialGil~a~~l~~r~~kr~g~~~~~i~dl~i~~vi~giIGARL~yVl~-~~~~y~~~~~~P~~~il~iw--~G--GLs 102 (460)
T PRK13108 28 VCVITGIIVALLIGDRRLTARGGERGMTYDIALWAVPFGLIGGRLYHLAT-DWRTYFGDGGAGLAAALRIW--DG--GLG 102 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHHHHhc-CHHHHhccccChHHHHHhhc--cC--Cch
Q ss_pred eecceeeeecchhhhhccCCCCCccchhh-hhhHhHHHHHHHhhc
Q 041332 273 SLGGVVLSITGVETMFADLGHFSSLSIKV-AFTFLVYPCLILAYM 316 (753)
Q Consensus 273 ~LG~V~L~iTGaEALyADmGHFg~~~Ir~-aw~~~V~PaL~LnY~ 316 (753)
.-||++..+.|+- +|+ -++-|.. .|.=++-|++.|.++
T Consensus 103 i~GGlIGg~l~~~-~y~-----r~~ki~~~~~~D~~ap~l~lGqa 141 (460)
T PRK13108 103 IWGAVTLGVMGAW-IGC-----RRCGIPLPVLLDAVAPGVVLAQA 141 (460)
T ss_pred HHHHHHHHHHHHH-HHH-----HHhCCCHHHHHHHHHHHHHHHHH
No 45
>PF04725 PsbR: Photosystem II 10 kDa polypeptide PsbR; InterPro: IPR006814 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight intrinsic protein PsbR found in PSII, which is also known as the 10 kDa polypeptide. The PsbR gene is found only in the nucleus of green algae and higher plants. PsbR may provide a binding site for the extrinsic oxygen-evolving complex protein PsbP to the thylakoid membrane. PsbR has a transmembrane domain to anchor it to the thylakoid membrane, and a charged N-terminal domain capable of forming ion bridges with extrinsic proteins, allowing PsbR to act as a docking protein. PsbR may be a pH-dependent stabilising protein that functions at both donor and acceptor sides of PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009654 oxygen evolving complex, 0042651 thylakoid membrane
Probab=20.34 E-value=77 Score=29.44 Aligned_cols=36 Identities=28% Similarity=0.471 Sum_probs=27.3
Q ss_pred CcchhHHHHhhccCCCCCCCCchhhhhhhHHHHHHHHHHHhh
Q 041332 41 STSPLYVYKTAFSGKLSLHENDEEIYGVLSFIFWTFTLIALL 82 (753)
Q Consensus 41 GTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~liv~i 82 (753)
|-||+|+=.+-=.. -+.-..|..-|++|+.++...+
T Consensus 49 gYSPIY~p~~Ws~~------GD~Y~gGt~gL~~WA~~l~glL 84 (99)
T PF04725_consen 49 GYSPIYTPDEWSPS------GDVYVGGTTGLLIWAVTLAGLL 84 (99)
T ss_pred ccCCCcChhhcCCC------CCeecCChhhHHHHHHHHHHHH
Confidence 78999997665322 1456778999999999998765
Done!