Query 041333
Match_columns 513
No_of_seqs 454 out of 3943
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 09:56:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041333.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041333hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 2.2E-41 7.7E-46 374.6 38.4 332 93-438 136-510 (802)
2 3bcv_A Putative glycosyltransf 99.9 1.3E-27 4.5E-32 227.3 15.8 206 95-312 3-223 (240)
3 1qg8_A Protein (spore coat pol 99.9 7.2E-28 2.5E-32 231.3 10.2 214 97-332 1-235 (255)
4 1xhb_A Polypeptide N-acetylgal 99.9 2E-26 6.9E-31 241.5 18.8 240 93-342 25-299 (472)
5 2d7i_A Polypeptide N-acetylgal 99.9 8.8E-26 3E-30 241.4 16.6 237 94-339 109-374 (570)
6 2z86_A Chondroitin synthase; G 99.9 7.2E-25 2.5E-29 237.7 23.0 219 95-322 91-338 (625)
7 2z86_A Chondroitin synthase; G 99.9 7.9E-25 2.7E-29 237.4 16.2 223 94-337 372-598 (625)
8 2ffu_A Ppgalnact-2, polypeptid 99.9 1.1E-24 3.8E-29 229.9 16.5 209 93-314 62-290 (501)
9 4fix_A UDP-galactofuranosyl tr 99.9 1.5E-24 5.1E-29 233.7 11.8 217 94-317 177-420 (657)
10 3ckj_A Putative uncharacterize 99.9 1.1E-22 3.9E-27 202.7 18.2 205 94-313 45-263 (329)
11 3l7i_A Teichoic acid biosynthe 99.9 4.5E-23 1.5E-27 227.1 0.0 199 97-311 2-203 (729)
12 3f1y_A Mannosyl-3-phosphoglyce 99.8 4E-20 1.4E-24 187.0 16.7 196 95-313 92-308 (387)
13 2fy7_A Beta-1,4-galactosyltran 99.8 2.8E-20 9.5E-25 180.5 7.5 179 95-337 63-263 (287)
14 2nxv_A ATP synthase subunits r 99.8 2.2E-19 7.6E-24 171.6 12.1 184 94-315 13-204 (249)
15 2bo4_A Mannosylglycerate synth 99.6 3.7E-15 1.3E-19 150.3 17.8 193 101-309 4-212 (397)
16 2wvl_A Mannosyl-3-phosphoglyce 99.2 7.5E-11 2.6E-15 113.5 11.4 106 96-209 52-181 (391)
17 2zu9_A Mannosyl-3-phosphoglyce 99.0 1.1E-08 3.7E-13 101.6 17.6 105 97-212 51-184 (394)
18 1fo8_A Alpha-1,3-mannosyl-glyc 99.0 1.6E-09 5.6E-14 106.6 10.6 117 97-224 2-139 (343)
19 3lw6_A FI08434P, beta-4-galact 98.1 8.2E-06 2.8E-10 76.3 9.3 179 96-337 50-250 (287)
20 2c0n_A A197; thermophil protei 97.0 0.0017 5.8E-08 57.2 7.4 116 172-303 37-165 (203)
21 1omz_A Alpha-1,4-N-acetylhexos 95.2 0.1 3.5E-06 49.4 10.1 119 95-226 26-144 (293)
22 3tqd_A 3-deoxy-manno-octuloson 95.1 0.06 2.1E-06 50.5 8.6 182 110-307 35-234 (256)
23 2d0j_A Galactosylgalactosylxyl 93.9 0.54 1.8E-05 43.1 11.3 102 96-208 2-121 (246)
24 3k8d_A 3-deoxy-manno-octuloson 93.7 0.24 8.3E-06 46.5 9.2 92 110-217 44-136 (264)
25 3cu0_A Galactosylgalactosylxyl 93.4 0.56 1.9E-05 43.7 10.6 105 93-208 17-153 (281)
26 3oam_A 3-deoxy-manno-octuloson 92.5 0.33 1.1E-05 45.2 8.1 183 108-307 26-225 (252)
27 1v84_A Galactosylgalactosylxyl 91.7 0.61 2.1E-05 42.9 8.5 102 96-208 2-127 (253)
28 4fcu_A 3-deoxy-manno-octuloson 91.1 1.4 4.7E-05 41.0 10.6 97 107-218 24-122 (253)
29 2wee_A MOBA-related protein; u 87.2 3.2 0.00011 36.3 9.7 91 107-211 29-120 (197)
30 2y6p_A 3-deoxy-manno-octuloson 87.1 3.4 0.00011 37.4 10.1 90 107-217 25-116 (234)
31 2waw_A MOBA relate protein; un 85.0 7.9 0.00027 33.7 11.1 91 107-211 29-120 (199)
32 2j0a_A Beta-1,3-N-acetylglucos 83.3 1.3 4.3E-05 42.0 5.2 108 186-307 92-210 (280)
33 1h7e_A 3-deoxy-manno-octuloson 82.6 16 0.00054 33.0 12.5 91 107-215 25-117 (245)
34 4fce_A Bifunctional protein GL 81.5 4.9 0.00017 40.5 9.3 98 107-221 34-132 (459)
35 3f1c_A Putative 2-C-methyl-D-e 80.8 12 0.00041 34.1 10.9 100 107-216 30-134 (246)
36 3d5n_A Q97W15_sulso; NESG, SSR 80.7 2 6.9E-05 38.0 5.3 84 107-212 26-112 (197)
37 3st8_A Bifunctional protein GL 80.7 10 0.00034 38.9 11.4 109 96-215 30-139 (501)
38 2qh5_A PMI, ALGA, mannose-6-ph 80.0 11 0.00039 35.7 10.8 95 102-211 30-128 (308)
39 3ngw_A Molybdopterin-guanine d 79.7 7.9 0.00027 34.5 9.0 85 107-213 24-109 (208)
40 3q80_A 2-C-methyl-D-erythritol 77.0 18 0.00063 32.7 10.8 97 107-218 33-131 (231)
41 1ezi_A CMP-N-acetylneuraminic 76.1 9.7 0.00033 34.1 8.6 92 107-213 27-123 (228)
42 3juk_A UDP-glucose pyrophospho 76.1 3.4 0.00012 38.7 5.7 56 157-216 94-153 (281)
43 4ecm_A Glucose-1-phosphate thy 75.9 6.1 0.00021 36.7 7.4 179 107-306 53-235 (269)
44 1vic_A 3-deoxy-manno-octuloson 75.9 24 0.0008 32.4 11.5 92 107-214 25-118 (262)
45 1e5k_A Molybdopterin-guanine d 75.7 7.4 0.00025 34.4 7.5 84 107-211 31-116 (201)
46 2v0h_A Bifunctional protein GL 74.9 11 0.00038 37.8 9.6 90 108-213 32-122 (456)
47 1qwj_A Cytidine monophospho-N- 74.5 39 0.0013 30.1 12.3 92 107-215 26-123 (229)
48 2e8b_A Probable molybdopterin- 73.4 12 0.00041 32.9 8.3 78 110-209 41-120 (201)
49 1vgw_A 4-diphosphocytidyl-2C-m 73.0 31 0.0011 30.6 11.3 96 107-215 32-132 (231)
50 1fxo_A Glucose-1-phosphate thy 70.4 11 0.00037 35.6 7.7 99 102-212 27-125 (293)
51 2yc3_A 2-C-methyl-D-erythritol 67.6 10 0.00034 34.0 6.6 95 107-214 30-125 (228)
52 1lvw_A Glucose-1-phosphate thy 65.5 22 0.00076 33.4 8.8 99 102-212 28-126 (295)
53 1i52_A 4-diphosphocytidyl-2-C- 65.4 32 0.0011 30.8 9.6 94 107-215 33-127 (236)
54 2vsh_A TARI, 2-C-methyl-D-eryt 64.8 23 0.00077 31.6 8.5 100 107-215 29-134 (236)
55 2xwl_A 2-C-methyl-D-erythritol 64.6 31 0.0011 30.4 9.3 90 107-212 28-118 (223)
56 2ux8_A Glucose-1-phosphate uri 63.8 12 0.00039 35.3 6.4 104 103-215 40-161 (297)
57 2xme_A CTP-inositol-1-phosphat 61.4 7.3 0.00025 35.1 4.4 87 108-210 44-130 (232)
58 1hm9_A GLMU, UDP-N-acetylgluco 61.1 27 0.00092 35.1 9.1 96 103-215 34-130 (468)
59 2e3d_A UTP--glucose-1-phosphat 61.0 19 0.00063 33.9 7.4 55 157-215 101-162 (302)
60 3pnn_A Conserved domain protei 60.4 38 0.0013 31.8 9.5 100 102-213 25-140 (303)
61 1w55_A ISPD/ISPF bifunctional 55.9 26 0.00091 34.2 7.6 88 107-215 29-117 (371)
62 1mc3_A Glucose-1-phosphate thy 53.9 23 0.00079 33.3 6.6 99 102-212 28-126 (296)
63 2pa4_A UTP-glucose-1-phosphate 52.4 29 0.001 33.0 7.2 58 157-216 104-162 (323)
64 3rsb_A Adenosylcobinamide-phos 52.2 28 0.00096 30.0 6.5 94 107-214 25-119 (196)
65 2gak_A Beta-1,6-N-acetylglucos 49.5 1.3E+02 0.0045 29.4 11.5 106 96-210 83-197 (391)
66 3kcq_A Phosphoribosylglycinami 43.8 1.7E+02 0.0059 25.9 10.8 94 99-207 9-102 (215)
67 3tzt_A Glycosyl transferase fa 40.8 1.3E+02 0.0045 27.6 9.6 99 99-203 6-116 (276)
68 1vpa_A 2-C-methyl-D-erythritol 35.3 52 0.0018 29.2 5.7 43 172-214 91-134 (234)
69 4ds3_A Phosphoribosylglycinami 35.0 2.3E+02 0.008 24.9 10.1 95 100-207 9-106 (209)
70 3cgx_A Putative nucleotide-dip 34.0 1.5E+02 0.0052 26.7 8.6 45 168-212 83-128 (242)
71 1ll2_A Glycogenin-1; protein-s 30.5 1.3E+02 0.0046 28.6 7.9 18 186-203 93-110 (333)
72 1g9r_A Glycosyl transferase; a 29.4 1.2E+02 0.0039 28.6 7.2 86 110-203 13-111 (311)
73 2x65_A Mannose-1-phosphate gua 26.0 1.2E+02 0.0042 28.8 6.8 95 102-209 27-122 (336)
74 2dpw_A Hypothetical protein TT 25.4 2.1E+02 0.0072 25.1 7.9 77 107-210 30-107 (232)
75 1yp2_A Glucose-1-phosphate ade 22.5 3.4E+02 0.011 26.6 9.6 105 102-214 45-161 (451)
76 3av3_A Phosphoribosylglycinami 22.2 4E+02 0.014 23.3 10.7 94 101-207 6-102 (212)
77 3p9x_A Phosphoribosylglycinami 21.2 4.2E+02 0.014 23.2 11.2 92 103-207 7-101 (211)
78 3brk_X Glucose-1-phosphate ade 20.8 1.7E+02 0.0057 28.6 6.8 103 103-214 38-151 (420)
79 2ywr_A Phosphoribosylglycinami 20.6 4.3E+02 0.015 23.1 9.0 94 101-207 4-100 (216)
80 3u2u_A Glycogenin-1, GN-1, GN1 20.1 1.9E+02 0.0066 26.4 6.5 17 187-203 95-111 (263)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=2.2e-41 Score=374.59 Aligned_cols=332 Identities=24% Similarity=0.369 Sum_probs=233.9
Q ss_pred CCCCCcEEEEEeccCChHH-HHHHHHHHHcCCCCCCeeEEEEEeC-CCchhHH----HHHHH------HHHHhhccCccE
Q 041333 93 NSSYPMVLVQIPMFNEREV-YQLSIGAACGLSWPSDRLIIQVLDD-STDLTIK----DMVEL------ECQRWASKGINI 160 (513)
Q Consensus 93 ~~~~P~VsIiIP~yne~~~-l~~~l~sl~~q~yp~~~i~IiV~Dd-s~D~t~~----~l~~~------~~~~~~~~~~~v 160 (513)
+++.|+|||+||+|||++. +++|++|+.+|+||+++++|+|+|| |+|+|.+ +..++ ..+++. ++.++
T Consensus 136 ~~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~-~~~~v 214 (802)
T 4hg6_A 136 PEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLC-RELGV 214 (802)
T ss_dssp TTTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHH-HHHTC
T ss_pred ccCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHH-HhcCc
Confidence 4678999999999999954 5999999999999987666666665 7777732 11111 112221 23478
Q ss_pred EEEEcCCCCCCChhHHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHHHHHH
Q 041333 161 KYEVRDNRKGYKAGALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMTRLQE 240 (513)
Q Consensus 161 ~~~~~~~~~g~Ka~aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~ 240 (513)
+++.+++++++|++|+|.|++.+ ++|||+++|+|+.++||++++++..+++||++++|+++....|++. .......
T Consensus 215 ~~i~~~~~~~GKa~alN~gl~~a---~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~-~~~~~~~ 290 (802)
T 4hg6_A 215 VYSTRERNEHAKAGNMSAALERL---KGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDP-IQRNLAL 290 (802)
T ss_dssp EEEECSSCCSHHHHHHHHHHHHC---CCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCH-HHHHHTC
T ss_pred EEEEecCCCCcchHHHHHHHHhc---CCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCch-HhhhhhH
Confidence 88888888778999999999999 9999999999999999999999999988999999999988877642 1111110
Q ss_pred hh-----hcchhhHHhhhcccCCCccccccceeeeeHHHHHHcCCCCCCCccchHHHHHHHhhCCCeEEEeccccccccc
Q 041333 241 MS-----LDYHFTVEQEVGSSTHAFFGFNGTAGVWRIAAVNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGTVKVKNEL 315 (513)
Q Consensus 241 ~~-----~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~gg~~~~~~~ED~~l~~rl~~~G~~i~~~~~~~~~~~~ 315 (513)
.. ....+...+...+..... .++|+++++||++++++|||+++.++||.+++.|+.++||++.++|++.++++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~~~Rr~al~~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~~~~~~~~ 369 (802)
T 4hg6_A 291 GDRCPPENEMFYGKIHRGLDRWGGA-FFCGSAAVLRRRALDEAGGFAGETITEDAETALEIHSRGWKSLYIDRAMIAGLQ 369 (802)
T ss_dssp CTTSCCTTHHHHHTHHHHHHHTTCC-CCCSSSEEEEHHHHHHHTTCCCSSSSHHHHHHHHHHTTTCCEEECCCCCEEECC
T ss_pred HhhhhHHHHHHHHHHHhhHhhcCCc-eecccchhhhHHHHHHcCCcCCCCcchHHHHHHHHHHcCCeEEEecCCEEEecC
Confidence 00 011122222222222222 367999999999999999999999999999999999999999999999999999
Q ss_pred CcCHHHHHHHHHhhhhchhHHHHhhccccccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc-cc
Q 041333 316 PSTFKAYRYQQHRWSCGPANLFRKMVMEIVRNKKVSLWKKVHVIYSFFFVRKIIAHIITFVLYCVVLPATVVIPEVQ-VP 394 (513)
Q Consensus 316 p~~~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~-~p 394 (513)
|++++++.+||.||.+|.+|.++++ ..+..+++++.+++.++..+..+. .++..++ ..+.|+..++..+. ++
T Consensus 370 p~t~~~~~~Qr~RW~~G~~q~l~~~--~pl~~~~l~~~~rl~~l~~~~~~~---~~~~~li--~ll~p~~~ll~~~~~~~ 442 (802)
T 4hg6_A 370 PETFASFIQQRGRWATGMMQMLLLK--NPLFRRGLGIAQRLCYLNSMSFWF---FPLVRMM--FLVAPLIYLFFGIEIFV 442 (802)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHS--CTTSCSSCCHHHHHHHHHHHHHTT---HHHHHHH--HHHHHHHHHHHCCCCSC
T ss_pred CCCHHHHHHHHHHHHccHHHHHHHh--CccccCCCCHHHHHHHHHHHHHHH---HHHHHHH--HHHHHHHHHHHhHHHhh
Confidence 9999999999999999999999875 234456678888887765544211 1111100 11122222111100 00
Q ss_pred -----hhHHHHH--------------------HHHHHHHHHHHHHHHHHHHHHhcCCCccceEEeeecc
Q 041333 395 -----KSIHLLV--------------------FWILFENVMSLHRTMATFIGLLEGVRVNEWIVTEKLG 438 (513)
Q Consensus 395 -----~~~~~~~--------------------~~~~~~~~~s~~~~~a~~~~l~~~~~~~~~~~T~K~g 438 (513)
.....++ .-.+++.+++++...+++.++++ .++.+|.+|+|.+
T Consensus 443 ~~~~~~~~~~lp~~l~~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~a~l~~l~~-~~~~~f~VT~Kg~ 510 (802)
T 4hg6_A 443 ATFEEVLAYMPGYLAVSFLVQNALFARQRWPLVSEVYEVAQAPYLARAIVTTLLR-PRSARFAVTAKDE 510 (802)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTTSCTTHHHHHHHHHHHHHHHHHHHHHHS-TTCCCCCCCCCCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCCcceECCCCc
Confidence 0000000 01234556778888899999995 2456899999943
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.95 E-value=1.3e-27 Score=227.26 Aligned_cols=206 Identities=14% Similarity=0.102 Sum_probs=138.9
Q ss_pred CCCcEEEEEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChh
Q 041333 95 SYPMVLVQIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAG 174 (513)
Q Consensus 95 ~~P~VsIiIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~ 174 (513)
..|+|||+||+||+++.+++||+|+++|+|++.+++| |+|+|+|+|.+. +++.. ++..++++++. ++.| ++.
T Consensus 3 ~~p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~~eiIv-vDd~S~d~t~~~-~~~~~----~~~~~i~~i~~-~n~G-~~~ 74 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIIL-IDDESPDNCPKI-CDDYA----AQYPNIKVIHK-KNAG-LGM 74 (240)
T ss_dssp CCCSEEEEEEESSCTTTHHHHHHHHHTCSSSSEEEEE-EECCCSSSHHHH-HHHHH----HHCSSEEEEEC-CCCC-HHH
T ss_pred CCCcEEEEEecCCCHHHHHHHHHHHHhCcCCCeEEEE-EECCCCcCHHHH-HHHHH----hhCCCEEEEEC-CCCC-hHH
Confidence 3588999999999999999999999999999766544 777799988774 44333 33467888863 4555 899
Q ss_pred HHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHHHHHHhhh-cchhh---HH
Q 041333 175 ALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMTRLQEMSL-DYHFT---VE 250 (513)
Q Consensus 175 aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~-~~~~~---~~ 250 (513)
|+|.|++.| +||||+++|+|+.++|++|++++..+++ ++.+++.+.....+.+............ ...+. ..
T Consensus 75 a~N~g~~~a---~g~~i~~lD~Dd~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (240)
T 3bcv_A 75 ACNSGLDVA---TGEYVAFCDSDDYVDSDMYMTMYNVAQK-YTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIH 150 (240)
T ss_dssp HHHHHHHHC---CSSEEEECCTTCCCCTTHHHHHHHHHHH-HTCSEEEC--------------------CEEECSHHHHH
T ss_pred HHHHHHHHc---CCCEEEEECCCCcCCHHHHHHHHHHHHh-cCCCEEEEeeEEEccCCccccccccccccccccCHHHHH
Confidence 999999999 9999999999999999999999999954 3555665544333322210000000000 00000 00
Q ss_pred hhhcccCCC--------ccccccceeeeeHHHHHHcC-CCCCC--CccchHHHHHHHhhCCCeEEEecccccc
Q 041333 251 QEVGSSTHA--------FFGFNGTAGVWRIAAVNEAG-GWKDR--TTVEDMDLAVRASLKGWKFLYLGTVKVK 312 (513)
Q Consensus 251 ~~~~~~~~~--------~~~~~G~~~~~rr~~l~~~g-g~~~~--~~~ED~~l~~rl~~~G~~i~~~~~~~~~ 312 (513)
......... ....+|+++++||++++++| ||++. ...||.+++.|+.++|+++.++|++..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~~~~ 223 (240)
T 3bcv_A 151 TLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQTFYN 223 (240)
T ss_dssp HHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC-----
T ss_pred HHHHHHhhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCCeEE
Confidence 000000110 11245788999999999999 99987 4689999999999999999999998654
No 3
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.94 E-value=7.2e-28 Score=231.29 Aligned_cols=214 Identities=13% Similarity=0.143 Sum_probs=153.4
Q ss_pred CcEEEEEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcC--------CC
Q 041333 97 PMVLVQIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRD--------NR 168 (513)
Q Consensus 97 P~VsIiIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~--------~~ 168 (513)
|+|||+||+||+++.+++||+|+++|+||+.+++| |+|+|+|+|.+.+ +++.. +.+++++..+ ++
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~q~~~~~eiiv-vDd~S~d~t~~~~-----~~~~~-~~~i~~i~~~~~~~~~~~~n 73 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFI-MDDNSNEETLNVI-----RPFLN-DNRVRFYQSDISGVKERTEK 73 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEE-EECSCCHHHHHHH-----GGGGG-STTEEEEECCCCSHHHHHSS
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHhccCCceEEEE-EECCCCchHHHHH-----HHHhh-cCCEEEEecccccccccccc
Confidence 68999999999999999999999999999766544 7777889887744 23433 6789999887 56
Q ss_pred CCCChhHHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEe--cCCCchHHHHHHhhhcch
Q 041333 169 KGYKAGALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFV--NADECLMTRLQEMSLDYH 246 (513)
Q Consensus 169 ~g~Ka~aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~--n~~~~~~~~~~~~~~~~~ 246 (513)
.| ++.|+|.|++.| +||||+++|+|+.++|++|++++..++++|++++|++..... +.+...... ..
T Consensus 74 ~G-~~~a~N~gi~~a---~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-------~~ 142 (255)
T 1qg8_A 74 TR-YAALINQAIEMA---EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKE-------TV 142 (255)
T ss_dssp CH-HHHHHHHHHHHC---CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEE-------EE
T ss_pred cC-HHHHHHHHHHHc---CCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhh-------cc
Confidence 55 899999999999 999999999999999999999999998889999999987765 432211100 00
Q ss_pred hhHHhhhcccCCCccccccceeeeeHHHHHHcC-CC------CCC-CccchHHHHHHHhhCCCeEEEecccccccc-cCc
Q 041333 247 FTVEQEVGSSTHAFFGFNGTAGVWRIAAVNEAG-GW------KDR-TTVEDMDLAVRASLKGWKFLYLGTVKVKNE-LPS 317 (513)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~g-g~------~~~-~~~ED~~l~~rl~~~G~~i~~~~~~~~~~~-~p~ 317 (513)
... ..........++|+++++||++++++| || ++. ...||.+++.|+.++| ++.++|++.+.+. .+.
T Consensus 143 ~~~---~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~~~~~r~~~~ 218 (255)
T 1qg8_A 143 RPA---AQVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDEELDLNYITDQ 218 (255)
T ss_dssp ECC---CSCBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEEEEEEEEC--
T ss_pred Cch---HHHHHhhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhC-CEEEecCcEEEEEEcCC
Confidence 000 000001223356899999999999998 78 433 3789999999999987 6999999877533 344
Q ss_pred CHHHH--HHHHHhhhhc
Q 041333 318 TFKAY--RYQQHRWSCG 332 (513)
Q Consensus 318 ~~~~~--~~Qr~RW~~G 332 (513)
+.... .+|+.+|.+.
T Consensus 219 s~s~~~~~~~~~~~~~~ 235 (255)
T 1qg8_A 219 SIHFQLFELEKNEFVRN 235 (255)
T ss_dssp ------------CTGGG
T ss_pred ccchhHHHHHHHHHHHh
Confidence 44433 3455555543
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.94 E-value=2e-26 Score=241.52 Aligned_cols=240 Identities=15% Similarity=0.106 Sum_probs=168.5
Q ss_pred CCCCCcEEEEEeccCCh-HHHHHHHHHHHcCCCCCCeeEEE-EEeCCCch-hHHHHHHHHHHHhhccCc-cEEEEEcCCC
Q 041333 93 NSSYPMVLVQIPMFNER-EVYQLSIGAACGLSWPSDRLIIQ-VLDDSTDL-TIKDMVELECQRWASKGI-NIKYEVRDNR 168 (513)
Q Consensus 93 ~~~~P~VsIiIP~yne~-~~l~~~l~sl~~q~yp~~~i~Ii-V~Dds~D~-t~~~l~~~~~~~~~~~~~-~v~~~~~~~~ 168 (513)
+++.|+||||||+|||+ +.+.+||+|+++|+||+...+|+ |+|+|+|+ +.+ .+++..+ +.. ++++++.+++
T Consensus 25 ~~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~-~l~~~~~----~~~~~v~vi~~~~n 99 (472)
T 1xhb_A 25 PDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKR-PLESYVK----KLKVPVHVIRMEQR 99 (472)
T ss_dssp CSCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTH-HHHHHHH----SSSSCEEEEECSSC
T ss_pred CcCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHH-HHHHHHH----HCCCcEEEEECCCC
Confidence 35689999999999999 99999999999999987533344 55568885 555 4443333 334 7999988888
Q ss_pred CCCChhHHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHH---HHH--Hhhh
Q 041333 169 KGYKAGALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMT---RLQ--EMSL 243 (513)
Q Consensus 169 ~g~Ka~aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~---~~~--~~~~ 243 (513)
.| +++|+|.|++.| +||||+++|+|+.++|++|++++..++++++++++ +.....+.+..... ... .+..
T Consensus 100 ~G-~~~a~N~g~~~A---~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (472)
T 1xhb_A 100 SG-LIRARLKGAAVS---RGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVC-PIIDVISDDTFEYMAGSDMTYGGFNW 174 (472)
T ss_dssp CC-HHHHHHHHHHHC---CSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEE-EEEEEECSSSCCEECCCTTEEEEECT
T ss_pred CC-hHHHHHHHHHhc---cCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEE-eeeeeEcCCCceeccCCCcccceeec
Confidence 77 899999999999 99999999999999999999999999778876544 44433332211000 000 0000
Q ss_pred cchhh------HHh--hhc--ccCCCccccccceeeeeHHHHHHcCCCCCCCc---cchHHHHHHHhhCCCeEEEecccc
Q 041333 244 DYHFT------VEQ--EVG--SSTHAFFGFNGTAGVWRIAAVNEAGGWKDRTT---VEDMDLAVRASLKGWKFLYLGTVK 310 (513)
Q Consensus 244 ~~~~~------~~~--~~~--~~~~~~~~~~G~~~~~rr~~l~~~gg~~~~~~---~ED~~l~~rl~~~G~~i~~~~~~~ 310 (513)
...+. ... ... .........+|+++++||++++++|||++... +||.|+++|+.+.|+++.++|.+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~ 254 (472)
T 1xhb_A 175 KLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSH 254 (472)
T ss_dssp TCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEE
T ss_pred cceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcE
Confidence 00000 000 000 00111223568999999999999999998763 799999999999999999999998
Q ss_pred cccccCcC-------------HHHHHHHHHhhhhchhHHHHhhcc
Q 041333 311 VKNELPST-------------FKAYRYQQHRWSCGPANLFRKMVM 342 (513)
Q Consensus 311 ~~~~~p~~-------------~~~~~~Qr~RW~~G~~~~~~~~~~ 342 (513)
++|....+ .++..+...+|..+..+.+....+
T Consensus 255 v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~~p 299 (472)
T 1xhb_A 255 VGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISP 299 (472)
T ss_dssp EEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHHTST
T ss_pred EEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 87654333 335556667898888776655433
No 5
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.93 E-value=8.8e-26 Score=241.36 Aligned_cols=237 Identities=14% Similarity=0.122 Sum_probs=168.4
Q ss_pred CCCCcEEEEEeccCCh-HHHHHHHHHHHcCCCCCCeeEEE-EEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCC
Q 041333 94 SSYPMVLVQIPMFNER-EVYQLSIGAACGLSWPSDRLIIQ-VLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGY 171 (513)
Q Consensus 94 ~~~P~VsIiIP~yne~-~~l~~~l~sl~~q~yp~~~i~Ii-V~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~ 171 (513)
++.|+||||||+|||+ +.+.+||+|+++|+||+...+|+ |+|+|+|+|..+++++. .++..++++++.+++.|
T Consensus 109 ~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~----~~~~~~v~vi~~~~n~G- 183 (570)
T 2d7i_A 109 ETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDY----MALFPSVRILRTKKREG- 183 (570)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHH----HTTSTTEEEEECSSCCC-
T ss_pred CCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHH----HHhCCeEEEEECCCCCC-
Confidence 5679999999999998 99999999999999987532333 66668999833344433 33446899998887777
Q ss_pred ChhHHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHHH--HH----Hhhhcc
Q 041333 172 KAGALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMTR--LQ----EMSLDY 245 (513)
Q Consensus 172 Ka~aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~--~~----~~~~~~ 245 (513)
++.|+|.|++.| ++|||+++|+|+.++|+||+.++..+.+++++ +|++.....+.+...... .. .+....
T Consensus 184 ~~~A~N~G~~~A---~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~-vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (570)
T 2d7i_A 184 LIRTRMLGASVA---TGDVITFLDSHCEANVNWLPPLLDRIARNRKT-IVCPMIDVIDHDDFRYETQAGDAMRGAFDWEM 259 (570)
T ss_dssp HHHHHHHHHHHC---CSSEEEECCSSEEECTTCSHHHHHHHHHCTTE-EEEEEEEEECTTTCCEECCTTSSCEEEECTTC
T ss_pred HHHHHHHHHHhc---CCCEEEEEcCCccccccHHHHHHHHHHhCCCE-EEeeeeeccCCCchhhccccCCcccccccccc
Confidence 899999999999 99999999999999999999999999777765 566655544432110000 00 000000
Q ss_pred hhhHH---h--hhc--ccCCCccccccceeeeeHHHHHHcCCCCCCCc---cchHHHHHHHhhCCCeEEEeccccccccc
Q 041333 246 HFTVE---Q--EVG--SSTHAFFGFNGTAGVWRIAAVNEAGGWKDRTT---VEDMDLAVRASLKGWKFLYLGTVKVKNEL 315 (513)
Q Consensus 246 ~~~~~---~--~~~--~~~~~~~~~~G~~~~~rr~~l~~~gg~~~~~~---~ED~~l~~rl~~~G~~i~~~~~~~~~~~~ 315 (513)
.+... . ... ........++|+++++||++++++|||++... .||.|+++|+.+.|+++.++|.+.++|..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~ 339 (570)
T 2d7i_A 260 YYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIY 339 (570)
T ss_dssp CEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECC
T ss_pred cccccccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEc
Confidence 00000 0 000 00111223669999999999999999998763 79999999999999999999999887642
Q ss_pred ----CcC-------HHHHHHHHHhhhhchhHHHHh
Q 041333 316 ----PST-------FKAYRYQQHRWSCGPANLFRK 339 (513)
Q Consensus 316 ----p~~-------~~~~~~Qr~RW~~G~~~~~~~ 339 (513)
|.+ .++..+-..+|.....+.+.+
T Consensus 340 r~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~ 374 (570)
T 2d7i_A 340 RKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQ 374 (570)
T ss_dssp CSSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHT
T ss_pred cccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 211 345556667898887766544
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.93 E-value=7.2e-25 Score=237.72 Aligned_cols=219 Identities=17% Similarity=0.224 Sum_probs=160.5
Q ss_pred CCCcEEEEEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChh
Q 041333 95 SYPMVLVQIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAG 174 (513)
Q Consensus 95 ~~P~VsIiIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~ 174 (513)
..|.|||+||+|||++.+.+||+|+.+|+++....+|+|+|+|+|++.+.+ + ++ ....+++++.++++.+++++
T Consensus 91 ~~p~vsviIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~-~----~~-~~~~~i~~i~~~~~~~g~~~ 164 (625)
T 2z86_A 91 IIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIV-R----EF-ESLLNIKYVRQKDYGYQLCA 164 (625)
T ss_dssp CCCCEEEEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHH-H----TT-TTTSCEEEEEECCCSCCHHH
T ss_pred cCCcEEEEEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHH-H----Hh-hhcCCeEEEEeCCCCcchhH
Confidence 458999999999999999999999999988743223336667888876643 3 23 22357888887766556999
Q ss_pred HHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHHHHHHhhhcc---------
Q 041333 175 ALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMTRLQEMSLDY--------- 245 (513)
Q Consensus 175 aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~--------- 245 (513)
|+|.|++.| ++|+|+++|+|+.++|++|++++..++++|+++++++.....+................
T Consensus 165 a~N~g~~~a---~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (625)
T 2z86_A 165 VRNLGLRAA---KYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNN 241 (625)
T ss_dssp HHHHHHHHC---CSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC-----
T ss_pred HHHHHHHhC---CcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCC
Confidence 999999999 99999999999999999999999999888999888887766554322222211100000
Q ss_pred --------------h---hhHHhhhcccCCCccccccceeeeeHHHHHHcCCCCCCCc---cchHHHHHHHhhCCCeEEE
Q 041333 246 --------------H---FTVEQEVGSSTHAFFGFNGTAGVWRIAAVNEAGGWKDRTT---VEDMDLAVRASLKGWKFLY 305 (513)
Q Consensus 246 --------------~---~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~gg~~~~~~---~ED~~l~~rl~~~G~~i~~ 305 (513)
. +...............++|+++++||++++++|||++... +||.|++.|+.++|+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~ 321 (625)
T 2z86_A 242 QVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRS 321 (625)
T ss_dssp ----------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEE
T ss_pred chhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEE
Confidence 0 0000000111122233779999999999999999998763 6999999999999999999
Q ss_pred ecccccccccCcCHHHH
Q 041333 306 LGTVKVKNELPSTFKAY 322 (513)
Q Consensus 306 ~~~~~~~~~~p~~~~~~ 322 (513)
+|++.++|..|.+....
T Consensus 322 ~p~~~v~H~~~~~~~~~ 338 (625)
T 2z86_A 322 VEGAMAYHQEPPGKENE 338 (625)
T ss_dssp CGGGCEEEECCC-----
T ss_pred cccchhhccCCccccch
Confidence 99999998887765433
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.92 E-value=7.9e-25 Score=237.42 Aligned_cols=223 Identities=16% Similarity=0.151 Sum_probs=166.8
Q ss_pred CCCCcEEEEEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCCh
Q 041333 94 SSYPMVLVQIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKA 173 (513)
Q Consensus 94 ~~~P~VsIiIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka 173 (513)
...|.|||+||+||+++.+++||+|+++|+|++.+++| |+|+|+|+|.+.+.+ +..+..+++++. +++.| ++
T Consensus 372 ~~~~~vsiii~~yn~~~~l~~~l~s~~~q~~~~~eiiv-vdd~S~d~t~~~~~~-----~~~~~~~i~~~~-~~n~G-~~ 443 (625)
T 2z86_A 372 KRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCI-CDDGSTDDTLRILQE-----HYANHPRVRFIS-QKNKG-IG 443 (625)
T ss_dssp CSSCSEEEEEEESSCTTTHHHHHHHHHSSSCCSEEEEE-EEESCSSSHHHHHHH-----HHTTCTTEEEEE-ECCCC-HH
T ss_pred ccCCeEEEEEeCCCCHHHHHHHHHHHHhCcCCCeEEEE-EECcCChhHHHHHHH-----HHhhCCcEEEEe-CCCCC-HH
Confidence 35689999999999999999999999999999776655 788899999875432 333456788886 44555 89
Q ss_pred hHHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHHHHHHhhhcchhhHHhhh
Q 041333 174 GALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMTRLQEMSLDYHFTVEQEV 253 (513)
Q Consensus 174 ~aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~ 253 (513)
.|+|.|++.| +||||+++|+|+.++|++|++++..++++|++++|++.....+.+........ ... .+.....
T Consensus 444 ~a~n~g~~~a---~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~- 516 (625)
T 2z86_A 444 SASNTAVRLC---RGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGY--NWP-IYSREKL- 516 (625)
T ss_dssp HHHHHHHHHC---CSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEECC--CCS-SCCHHHH-
T ss_pred HHHHHHHHhc---CCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccCc--ccc-cCCHHHH-
Confidence 9999999999 99999999999999999999999999889999999998776665443221100 000 0000000
Q ss_pred cccCCCccccccceeeeeHHHHHHcCCCCCCC-ccchHHHHHHHhhCCCeEEEecccccc---cccCcCHHHHHHHHHhh
Q 041333 254 GSSTHAFFGFNGTAGVWRIAAVNEAGGWKDRT-TVEDMDLAVRASLKGWKFLYLGTVKVK---NELPSTFKAYRYQQHRW 329 (513)
Q Consensus 254 ~~~~~~~~~~~G~~~~~rr~~l~~~gg~~~~~-~~ED~~l~~rl~~~G~~i~~~~~~~~~---~~~p~~~~~~~~Qr~RW 329 (513)
.. ..++|+++++||++++++|||++.. .+||+|++.|+.++| ++.++|++..+ |....+.+....|+.+|
T Consensus 517 ---~~--~~~~~~~~~~~r~~~~~~ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~~~~~r~h~~~~s~~~~~~~~~~~ 590 (625)
T 2z86_A 517 ---TS--AMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVG-PFKHINKICYNRVLHGENTSIKKLDIQKENH 590 (625)
T ss_dssp ---TT--SCCCCSCEEEEHHHHTTTTCCCSSCSSCHHHHHHHHHTTTS-CEEEEEEEEEEEECC----CCSSHHHHHHHH
T ss_pred ---hh--cccCCceEEEEHHHHHHhCCCCCccCChHHHHHHHHHHHhC-CEEEeCCcEEEEEECCCccchhhHHHHHHHH
Confidence 01 1256888999999999999999875 789999999999999 99999998764 44455556666676666
Q ss_pred hhchhHHH
Q 041333 330 SCGPANLF 337 (513)
Q Consensus 330 ~~G~~~~~ 337 (513)
.+...+.+
T Consensus 591 ~~~~~~~l 598 (625)
T 2z86_A 591 FKVVNESL 598 (625)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 65444444
No 8
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.92 E-value=1.1e-24 Score=229.90 Aligned_cols=209 Identities=15% Similarity=0.118 Sum_probs=152.5
Q ss_pred CCCCCcEEEEEeccCChH-HHHHHHHHHHcCCCCCCeeEEE-EEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCC
Q 041333 93 NSSYPMVLVQIPMFNERE-VYQLSIGAACGLSWPSDRLIIQ-VLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKG 170 (513)
Q Consensus 93 ~~~~P~VsIiIP~yne~~-~l~~~l~sl~~q~yp~~~i~Ii-V~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g 170 (513)
+++.|.||||||+|||++ .+.+||+|+++|++|+...+|+ |+|+|+|+|.+... ++..++++++.+++.|
T Consensus 62 ~~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~--------~~~~~v~vi~~~~n~G 133 (501)
T 2ffu_A 62 RVDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALL--------GKIEKVRVLRNDRREG 133 (501)
T ss_dssp CSSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGG--------GGBTTEEEEECSSCCH
T ss_pred CcCCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHH--------hcCCCEEEEECCCCcC
Confidence 456899999999999996 9999999999999987533333 55668898865332 2356899998887777
Q ss_pred CChhHHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHH-HH----HHhhhcc
Q 041333 171 YKAGALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMT-RL----QEMSLDY 245 (513)
Q Consensus 171 ~Ka~aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~-~~----~~~~~~~ 245 (513)
++.|+|.|++.| +||||+++|+|+.++|++|+.++..+++++. ++|++.....+.+..... .. ..+....
T Consensus 134 -~~~A~N~G~~~A---~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (501)
T 2ffu_A 134 -LMRSRVRGADAA---QAKVLTFLDSHCECNEHWLEPLLERVAEDRT-RVVSPIIDVINMDNFQYVGASADLKGGFDWNL 208 (501)
T ss_dssp -HHHHHHHHHHHC---CSSEEEECCSSEEECTTCHHHHHHHHHHCTT-EEEEEEEEEECTTTCCEECBCSSEEEEECTTC
T ss_pred -HHHHHHHHHHhc---CCCEEEEECCCcccCccHHHHHHHHHHhCCC-eEEEeeeccCcCCCceeecCCcccceEeeecC
Confidence 899999999999 9999999999999999999999999966665 577766554443210000 00 0000000
Q ss_pred hh------hHHhhhc--cc--CCCccccccceeeeeHHHHHHcCCCCCCCc---cchHHHHHHHhhCCCeEEEecccccc
Q 041333 246 HF------TVEQEVG--SS--THAFFGFNGTAGVWRIAAVNEAGGWKDRTT---VEDMDLAVRASLKGWKFLYLGTVKVK 312 (513)
Q Consensus 246 ~~------~~~~~~~--~~--~~~~~~~~G~~~~~rr~~l~~~gg~~~~~~---~ED~~l~~rl~~~G~~i~~~~~~~~~ 312 (513)
.+ ......+ .. ........|+++++||++++++|||++... +||.|+++|+.+.|+++.++|++.+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~ 288 (501)
T 2ffu_A 209 VFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVG 288 (501)
T ss_dssp CEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccCcEEE
Confidence 00 0000000 00 111123568999999999999999999762 89999999999999999999998887
Q ss_pred cc
Q 041333 313 NE 314 (513)
Q Consensus 313 ~~ 314 (513)
|.
T Consensus 289 H~ 290 (501)
T 2ffu_A 289 HV 290 (501)
T ss_dssp EC
T ss_pred EE
Confidence 75
No 9
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.91 E-value=1.5e-24 Score=233.75 Aligned_cols=217 Identities=14% Similarity=0.114 Sum_probs=151.7
Q ss_pred CCCCcEEEEEeccCChHHHHHHHHHHHcCCC---CCCeeEEEEEeCCCchh-HHHHHHHHHHHhhccCccEEEEEcCCCC
Q 041333 94 SSYPMVLVQIPMFNEREVYQLSIGAACGLSW---PSDRLIIQVLDDSTDLT-IKDMVELECQRWASKGINIKYEVRDNRK 169 (513)
Q Consensus 94 ~~~P~VsIiIP~yne~~~l~~~l~sl~~q~y---p~~~i~IiV~Dds~D~t-~~~l~~~~~~~~~~~~~~v~~~~~~~~~ 169 (513)
...|+||||||+||+++.+.+||+|+.+|+| +.++++| |+|+|+|++ .....+.. + ..+.+++++..+ |.
T Consensus 177 ~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIV-VDNgStD~s~~~~~~e~~-~---~~~~~I~vI~~~-N~ 250 (657)
T 4fix_A 177 PGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIV-PDQGERKVRDHPDFPAAA-A---RLGSRLSIHDQP-NL 250 (657)
T ss_dssp CSCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEE-EECSSSCGGGSTTHHHHH-H---HHGGGEEEEECC-CC
T ss_pred CCCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEE-EECcCCCccchHHHHHHH-H---hcCCCEEEEECC-CC
Confidence 3468999999999999999999999999998 3334332 555577743 11122211 1 124589999877 66
Q ss_pred CCChhHHHHHHHhcccC-CCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCc------hHHH-----
Q 041333 170 GYKAGALREGMKRGYVK-SCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFVNADEC------LMTR----- 237 (513)
Q Consensus 170 g~Ka~aln~gl~~a~~~-~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~------~~~~----- 237 (513)
| .++|+|.|++.|... ++|||+++|+|+.++|++|++++..++.+|++++|++.....+.... +...
T Consensus 251 G-~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~ 329 (657)
T 4fix_A 251 G-GSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMW 329 (657)
T ss_dssp H-HHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEE
T ss_pred C-HHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccc
Confidence 6 799999999998332 46899999999999999999999999888899999887654433210 0000
Q ss_pred --HHHhhhcchh-----h---HHhhhcccCCCccccccceeeeeHHHHHHcCCCCCCC-ccchHHHHHHHhhCCCeEEEe
Q 041333 238 --LQEMSLDYHF-----T---VEQEVGSSTHAFFGFNGTAGVWRIAAVNEAGGWKDRT-TVEDMDLAVRASLKGWKFLYL 306 (513)
Q Consensus 238 --~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~gg~~~~~-~~ED~~l~~rl~~~G~~i~~~ 306 (513)
.....+...+ . ................|+++++||++++++||+++.. ..||.|+++|+.++||++.++
T Consensus 330 ~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~~F~~~ED~Dl~lR~~~~G~ki~~~ 409 (657)
T 4fix_A 330 TAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHGYPTVTL 409 (657)
T ss_dssp EECTTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCSCSSSSHHHHHHHHHHHTTCCEEEE
T ss_pred cccccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChhHhccCcHHHHHHHHHHcCCeEEEE
Confidence 0000000000 0 0000011122233467899999999999999998543 579999999999999999999
Q ss_pred cccccccccCc
Q 041333 307 GTVKVKNELPS 317 (513)
Q Consensus 307 ~~~~~~~~~p~ 317 (513)
|++.++|....
T Consensus 410 p~a~V~H~~~~ 420 (657)
T 4fix_A 410 PGAAIWHMAWS 420 (657)
T ss_dssp EEEEEEECCSS
T ss_pred CCEEEEEcCcC
Confidence 99999886543
No 10
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.89 E-value=1.1e-22 Score=202.66 Aligned_cols=205 Identities=16% Similarity=0.077 Sum_probs=138.0
Q ss_pred CCCCcEEEEEeccCChHHHHHHHHHHHcCCCCC-CeeEEEEEeCCCchhHHHHHHHHHHHhhcc-CccEEEEE-cCCCCC
Q 041333 94 SSYPMVLVQIPMFNEREVYQLSIGAACGLSWPS-DRLIIQVLDDSTDLTIKDMVELECQRWASK-GINIKYEV-RDNRKG 170 (513)
Q Consensus 94 ~~~P~VsIiIP~yne~~~l~~~l~sl~~q~yp~-~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~-~~~v~~~~-~~~~~g 170 (513)
...|+|||+||+|||++.+++||+|+.+|+||. .+++| |+|+|+|+|.+.+.+ +..+ ..+++++. .+++.
T Consensus 45 ~~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~~~eiiv-VDdgS~D~t~~~~~~-----~~~~~~~~~~~~~~~~~n~- 117 (329)
T 3ckj_A 45 KAGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIV-LDSGSTDDTEIRAVA-----AGARVVSREQALPEVPIRP- 117 (329)
T ss_dssp TTTCCEEEEEEESSCTTTHHHHHHHHGGGBTTTBSEEEE-EECSCCSSHHHHHHH-----TTCEEEEHHHHCTTSCCCC-
T ss_pred ccCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCCCcEEEE-EeCCCCchHHHHHHH-----hhhhhccceeeeccCCCCC-
Confidence 446899999999999999999999999999985 45444 777799999875432 2111 01111221 34444
Q ss_pred CChhHHHHHHHhcccCCCcEEEEEcCCCC-CChHHHHHHHHHHhcCCCeeEEEeeEEEecC-C-------CchHHHHHHh
Q 041333 171 YKAGALREGMKRGYVKSCDFVVIFDADFQ-PESDFLTRTIPFLVHNPQLALVQARWEFVNA-D-------ECLMTRLQEM 241 (513)
Q Consensus 171 ~Ka~aln~gl~~a~~~~~d~I~~lDaD~~-~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~-~-------~~~~~~~~~~ 241 (513)
||+.|+|.|++.| +||||+++|+|+. ++|++|++++..+.++|++++|+|....... + .....+....
T Consensus 118 G~~~a~n~g~~~a---~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (329)
T 3ckj_A 118 GKGEALWRSLAAS---RGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTEL 194 (329)
T ss_dssp SHHHHHHHHHHHC---CCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------CHHHHH
T ss_pred CHHHHHHHHHHhC---CCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCCCceehh
Confidence 4999999999999 9999999999999 8999999999997688999999987653221 0 0111111111
Q ss_pred hhcchhhHHhhhcccCCCccccccceeeeeHHHHHHcCCCCCCCccchHHHHHHHhh-CCCe-EEEeccccccc
Q 041333 242 SLDYHFTVEQEVGSSTHAFFGFNGTAGVWRIAAVNEAGGWKDRTTVEDMDLAVRASL-KGWK-FLYLGTVKVKN 313 (513)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~gg~~~~~~~ED~~l~~rl~~-~G~~-i~~~~~~~~~~ 313 (513)
.....+... ...........|++.++||++++++| |++. ..||.++..++.+ .|++ +..+|.....|
T Consensus 195 ~~~~~~~~~---~~~~~~~~~~~~g~~~~rr~~l~~i~-f~~~-~~~D~~l~~r~~~~~g~~~i~~v~~~~r~h 263 (329)
T 3ckj_A 195 VARPLLAAL---RPELGCILQPLGGEYAATRELLTSVP-FAPG-YGVEIGLLVDTFDRLGLDAIAQVNLGVREH 263 (329)
T ss_dssp THHHHHHHH---CGGGGGCSCTTCSCEEEEHHHHTTSC-BCCG-GGHHHHHHHHHHHHHCGGGEEEEEEEECEE
T ss_pred hHHHHHHHh---hhhhccccCCCccceeeeHHHHHhCC-CCCC-CcccHHHHHHHHHhcCCccEeeecceEEec
Confidence 000001000 01111122245777899999999996 7543 5699999999986 6775 77776544444
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.85 E-value=4.5e-23 Score=227.06 Aligned_cols=199 Identities=18% Similarity=0.166 Sum_probs=0.0
Q ss_pred CcEEEEEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHH
Q 041333 97 PMVLVQIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGAL 176 (513)
Q Consensus 97 P~VsIiIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~al 176 (513)
|+||||||+||+++.|++||+|+++|+|++.|++| |+|+|+|+|.+.+ ++..+++ +.+++++..+++.| .++|+
T Consensus 2 p~vSVIIp~yN~~~~L~~~L~Sll~Qt~~~~EIIV-VDDgStD~t~~il-~~~~~~~---~~~i~~i~~~~n~G-~~~ar 75 (729)
T 3l7i_A 2 NKLTIIVTYYNAEEYITGCLESIKQQRTQDFNLII-VNDGSTDQSKKLM-DEAIKDY---DKNIRFIDLDENSG-HAHAR 75 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEcCCCHHHHHHHHHHHHhCCCCCeEEEE-EECCCCCcHHHHH-HHHHHhC---CCCEEEEECCCCCC-HHHHH
Confidence 68999999999999999999999999999777655 7778999888744 3332222 45788888777766 89999
Q ss_pred HHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHHHHHHhhhcchhhHHhhhccc
Q 041333 177 REGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMTRLQEMSLDYHFTVEQEVGSS 256 (513)
Q Consensus 177 n~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (513)
|.|++.| +||||+++|+|+.++|++|++++..++ ++++ +.+.....+.+.............. ........
T Consensus 76 N~gi~~A---~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~--v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-- 146 (729)
T 3l7i_A 76 NIALEEV---ETPYFMFLDADDELASYAITFYLEKFN-NTDG--LIAPIHSFTTQRPQFVDLDRVRVEY-FNAKENIN-- 146 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhc---cCCEEEEECCCCCCChhHHHHHHHHhc-CCCE--EEEeeEEeecCCCccccccceeeee-ecchhhHH--
Confidence 9999999 999999999999999999999999994 4443 4333322222211111111111000 00000000
Q ss_pred CCCccccccceeeeeHHHHHHcC-CCCCCC-ccchHHHHHHHhhCCCeEEEe-ccccc
Q 041333 257 THAFFGFNGTAGVWRIAAVNEAG-GWKDRT-TVEDMDLAVRASLKGWKFLYL-GTVKV 311 (513)
Q Consensus 257 ~~~~~~~~G~~~~~rr~~l~~~g-g~~~~~-~~ED~~l~~rl~~~G~~i~~~-~~~~~ 311 (513)
.......+++.++||++++++| +|++.. ..||.+++.|+..+|+++.++ +.+..
T Consensus 147 -~~~~~~~~~~~~~rr~~l~~~gl~fde~~~~~ED~d~~~rl~~~g~~i~~~~~~~~~ 203 (729)
T 3l7i_A 147 -SFLRKQSACNIIFRTAIVRAHHIRFNENLNTYVDWSFVLEYMKYVNKFVRIFNFPFY 203 (729)
T ss_dssp ----------------------------------------------------------
T ss_pred -HHhhccchhheeeeHHHHHHcCCCcCCCCCcccCHHHHHHHHHhcCCEEEecCcEEE
Confidence 1111245778999999999999 899875 899999999999999999999 55554
No 12
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.83 E-value=4e-20 Score=187.02 Aligned_cols=196 Identities=15% Similarity=0.068 Sum_probs=136.3
Q ss_pred CCCcEEEEEeccCChHHHHHHHHHHHc--CCCC-CCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEE-------
Q 041333 95 SYPMVLVQIPMFNEREVYQLSIGAACG--LSWP-SDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEV------- 164 (513)
Q Consensus 95 ~~P~VsIiIP~yne~~~l~~~l~sl~~--q~yp-~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~------- 164 (513)
..|+|||+||+|||++.|.+||+|+.+ |+|| +.+++| |+|+|+|+|.+.+.+ + ..+++.
T Consensus 92 ~~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIV-VDDgStD~T~~i~~~-----~-----~~~v~~~~~~~i~ 160 (387)
T 3f1y_A 92 LGLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILV-VDADSEDGTAGVAAS-----H-----GAEVYSENELMSG 160 (387)
T ss_dssp HTCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEE-EECSCSSSHHHHHHH-----T-----TCEEEEGGGTTGG
T ss_pred CCCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEE-EcCcCCccHHHHHHH-----h-----CchhcccceeEec
Confidence 468999999999999999999999986 4665 445443 777799999885432 2 122332
Q ss_pred cCCCCCCChhHHHHHHHhcccCCCcEEEEEcCCCC-CChHHHHHHHHHHhcCCCeeEEEeeEEEecCC--------CchH
Q 041333 165 RDNRKGYKAGALREGMKRGYVKSCDFVVIFDADFQ-PESDFLTRTIPFLVHNPQLALVQARWEFVNAD--------ECLM 235 (513)
Q Consensus 165 ~~~~~g~Ka~aln~gl~~a~~~~~d~I~~lDaD~~-~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~--------~~~~ 235 (513)
.+.+.| |+.|+|.|++.| +||||+++|+|+. ++|++|.+++..+.++|++++|.|........ .+..
T Consensus 161 ~~~n~G-~g~A~n~G~~~A---~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~~~~g~v 236 (387)
T 3f1y_A 161 YGDAHG-KGDAMWRALSVT---RGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEEDGGGRV 236 (387)
T ss_dssp GCSCCS-HHHHHHHHTTTC---CSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CCBCCSHH
T ss_pred CCccCC-HHHHHHHHHHhc---CCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccccccCCch
Confidence 334555 999999999999 9999999999999 89999999999997788999999865422110 1111
Q ss_pred HHHHHhhhcchhhHHhhhcccCCCccccccceeeeeHHHHHHcCCCCCCCccchHHHHHHHh-hCCCe-EEEeccccccc
Q 041333 236 TRLQEMSLDYHFTVEQEVGSSTHAFFGFNGTAGVWRIAAVNEAGGWKDRTTVEDMDLAVRAS-LKGWK-FLYLGTVKVKN 313 (513)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~gg~~~~~~~ED~~l~~rl~-~~G~~-i~~~~~~~~~~ 313 (513)
.+.. ........ ...........|++.++||++++++ +|+ ...++|.++..++. +.|++ +..+|-....+
T Consensus 237 ~~~~---~~~l~~~~---~~~l~~~~d~~sG~~a~rR~~l~~i-~f~-~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h 308 (387)
T 3f1y_A 237 TELT---AKPLFNLF---YPELAGFVQPLAGEFVADRELFCSI-PFL-TGYAVETGIMIDVLKKVGLGAMAQVDLGERQN 308 (387)
T ss_dssp HHHT---HHHHHHHH---CGGGTTCSCTTCSCEEEEHHHHTTS-CEE-CSTTHHHHHHHHHHHHHCGGGEEEEEEEECCC
T ss_pred hhhh---HHHHHHHH---hHhhccccccccccEEEEHHHHHhC-CCC-CCcchHHHHHHHHHHhcCCCeEEEEecceeec
Confidence 1110 00000000 0011112223477889999999999 675 34778999998885 56987 98888766544
No 13
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.80 E-value=2.8e-20 Score=180.50 Aligned_cols=179 Identities=17% Similarity=0.188 Sum_probs=126.7
Q ss_pred CCCcEEEEEeccCChHHHHHHHHHHH---cCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCC
Q 041333 95 SYPMVLVQIPMFNEREVYQLSIGAAC---GLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGY 171 (513)
Q Consensus 95 ~~P~VsIiIP~yne~~~l~~~l~sl~---~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~ 171 (513)
..|+||||||+||+++.|++||+|+. +|++++.+ |+|+||++|.+ - +
T Consensus 63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~~E--IiVVdds~d~~---------------------------f-~ 112 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYG--IYVINQAGDTI---------------------------F-N 112 (287)
T ss_dssp CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEE--EEEEEECSSSC---------------------------C-C
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCCce--EEEEEeCCCCc---------------------------c-c
Confidence 36899999999999999999999999 68887554 45666655521 0 2
Q ss_pred ChhHHHHHH----HhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHHHHHHhhhcchh
Q 041333 172 KAGALREGM----KRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMTRLQEMSLDYHF 247 (513)
Q Consensus 172 Ka~aln~gl----~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~ 247 (513)
++.++|.|+ +.| ++|||+++|+|++++||+.... ...+|+. ... .... .. +
T Consensus 113 ~a~a~N~G~~~al~~A---~gd~i~flD~D~i~~~d~~~~~---~~~~p~~---------~~~---~~~~---~~----~ 167 (287)
T 2fy7_A 113 RAKLLNVGFQEALKDY---DYTCFVFSDVDLIPMNDHNAYR---CFSQPRH---------ISV---AMDK---FG----F 167 (287)
T ss_dssp HHHHHHHHHHHHHHHS---CCCEEEEECTTEEESBTTSCCS---CCSSCEE---------CCC---EEGG---GT----T
T ss_pred hhhhhhhHHHHHHHhC---CCCEEEEECCCcccCCCcceEe---cCCCCce---------EEE---eecc---cc----c
Confidence 678899999 888 9999999999999999962100 0011111 000 0000 00 0
Q ss_pred hHHhhhcccCCCccccccceeeeeHHHHHHcCCCCCCCc---cchHHHHHHHhhCCCeEEEecc-----ccccc------
Q 041333 248 TVEQEVGSSTHAFFGFNGTAGVWRIAAVNEAGGWKDRTT---VEDMDLAVRASLKGWKFLYLGT-----VKVKN------ 313 (513)
Q Consensus 248 ~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~gg~~~~~~---~ED~~l~~rl~~~G~~i~~~~~-----~~~~~------ 313 (513)
.. ....+.|+++++||+.++++|||++... .||.|++.|+.++|+++...+. ...+|
T Consensus 168 ------~~---~~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~ 238 (287)
T 2fy7_A 168 ------SL---PYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKN 238 (287)
T ss_dssp ------SC---SSTTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC-------
T ss_pred ------CC---CcCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCccc
Confidence 00 0123569999999999999999999763 5999999999999999884432 22222
Q ss_pred -ccCcCHHHHHHHHHhhhhchhHHH
Q 041333 314 -ELPSTFKAYRYQQHRWSCGPANLF 337 (513)
Q Consensus 314 -~~p~~~~~~~~Qr~RW~~G~~~~~ 337 (513)
..|..++...+|+.||.++.++.+
T Consensus 239 ~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 239 EPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp --CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred CCCHHHHHHHhhcccEEcCCCcccC
Confidence 356778889999999999987654
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.80 E-value=2.2e-19 Score=171.58 Aligned_cols=184 Identities=10% Similarity=0.015 Sum_probs=120.8
Q ss_pred CCCCcEEEEEeccCChHHHHHHHHHHHcC-CCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCC
Q 041333 94 SSYPMVLVQIPMFNEREVYQLSIGAACGL-SWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYK 172 (513)
Q Consensus 94 ~~~P~VsIiIP~yne~~~l~~~l~sl~~q-~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K 172 (513)
+..|.+||| |+||+++.+++||+|+.+. ..+.. .+|+|+||++.+ ..| .
T Consensus 13 ~~~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d---------------------------~~g-~ 62 (249)
T 2nxv_A 13 ESTLMFSVC-SLVRDQAKYDRLLESFERFGFTPDK-AEFLAADNREGN---------------------------QFH-G 62 (249)
T ss_dssp CCCCSEEEE-EEESCHHHHHHHHHHHHHTTCCTTT-EEEEEEECTTSC---------------------------SCC-T
T ss_pred CCcceEEEE-EeeCCHHHHHHHHHHHHHhccCCCc-EEEEEEECCCCC---------------------------ccc-H
Confidence 345789974 6799999999999977642 11222 455566764421 013 5
Q ss_pred hhHHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhc----CCCeeEEEeeEEEecCCCchHHHHHHhhhcchhh
Q 041333 173 AGALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVH----NPQLALVQARWEFVNADECLMTRLQEMSLDYHFT 248 (513)
Q Consensus 173 a~aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~----~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~ 248 (513)
+.|+|.|++.| +|||++++|+|+.++|+||++++..+++ +|++++++............. ............
T Consensus 63 a~a~N~Gi~~A---~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~g~~~-~~~~~~~~~~~~ 138 (249)
T 2nxv_A 63 FSWHKQMLPRC---KGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLNHSV-TAQALHISDVFG 138 (249)
T ss_dssp TTHHHHHGGGC---CSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCSCTTS-CCCEEEEEETTE
T ss_pred HHHHHHHHHhc---CCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEeecccccCCCCcee-eecccccCCccc
Confidence 78999999999 9999999999999999999999999965 499988875433222111000 000000000000
Q ss_pred HHhhhcccCCCccccccceeeeeHHHHHHcCCCCCCC---ccchHHHHHHHhhCCCeEEEeccccccccc
Q 041333 249 VEQEVGSSTHAFFGFNGTAGVWRIAAVNEAGGWKDRT---TVEDMDLAVRASLKGWKFLYLGTVKVKNEL 315 (513)
Q Consensus 249 ~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~gg~~~~~---~~ED~~l~~rl~~~G~~i~~~~~~~~~~~~ 315 (513)
.....+.........+|+++++||++ .|||++.. ..||.|++.|+.++|+++.+.|.. ++|..
T Consensus 139 ~~~~~~~~~~~v~~~~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~~-v~H~~ 204 (249)
T 2nxv_A 139 NDRRRGNVPCRVESLDECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDFH-LHHYG 204 (249)
T ss_dssp EEEEESCSSEEEEEECTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCCC-CEECC
T ss_pred cccccCCCceEcCeeeeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEeccE-EEECC
Confidence 00000011112223579999999999 78999743 458999999999999999999865 55544
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.64 E-value=3.7e-15 Score=150.33 Aligned_cols=193 Identities=11% Similarity=0.106 Sum_probs=120.1
Q ss_pred EEEeccCChHHHHHHHHHHH-cCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhh-ccCccEEEEEcC--C--CCCCChh
Q 041333 101 VQIPMFNEREVYQLSIGAAC-GLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWA-SKGINIKYEVRD--N--RKGYKAG 174 (513)
Q Consensus 101 IiIP~yne~~~l~~~l~sl~-~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~-~~~~~v~~~~~~--~--~~g~Ka~ 174 (513)
||||+ ||+ .+..+++++. .+.+|+.+++| |+|+|+|+|.+.+ ++..++.+ +.+.++.....+ . +. ||+.
T Consensus 4 VIiP~-~eE-~I~~vl~~l~~~~~~~~~EIIV-VDDGStD~T~eia-~~la~~~~~~~g~~vi~~~~~r~~~~n~-GkG~ 78 (397)
T 2bo4_A 4 VVFPF-KHE-HPEVLLHNVRVAAAHPRVHEVL-CIGYERDQTYEAV-ERAAPEISRATGTPVSVRLQERLGTLRP-GKGD 78 (397)
T ss_dssp EEEEC-CSS-CHHHHHHHHHHHHHSTTCCEEE-EEESSCCHHHHHH-HHHHHHHHHHHSCCEEEEECCCCSSSSS-SHHH
T ss_pred EEEeC-Ccc-CHHHHHHHHHHhccCCCeEEEE-EECcCCccHHHHH-HHhhhhcccccCCeEEEEecccCCCCCC-CHHH
Confidence 45555 544 4777887774 23456566544 8889999999954 44444443 335555444322 2 44 4999
Q ss_pred HHHHHH----HhcccCCCcEEEEEcCCCC-CChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHHHHH-Hhhhcchhh
Q 041333 175 ALREGM----KRGYVKSCDFVVIFDADFQ-PESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMTRLQ-EMSLDYHFT 248 (513)
Q Consensus 175 aln~gl----~~a~~~~~d~I~~lDaD~~-~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~-~~~~~~~~~ 248 (513)
|++.|+ +.+ +||+|+++|||.+ .+|+++.+++..+++ +.++|.+...-... .+...+.. .......+.
T Consensus 79 Al~~G~~~Al~~a---~gd~vv~mDADlq~~~P~~i~~Ll~~l~~--g~D~V~g~~~r~~~-~~~~~~~~~~~ll~~~~~ 152 (397)
T 2bo4_A 79 GMNTALRYFLEET---QWERIHFYDADITSFGPDWITKAEEAADF--GYGLVRHYFPRAST-DAMITWMITRTGFALLWP 152 (397)
T ss_dssp HHHHHHHHHHHHC---CCSEEEECCTTCSSCCHHHHHHHHHHHHT--TCSEEEEECCCCTT-SCHHHHHTHHHHHHHHCT
T ss_pred HHHHHHHHHHHhC---CCCEEEEEcCCCCCCCHHHHHHHHHHHHc--CCCEEEEEeccccC-CcHHHHHHHHHHHHHHHH
Confidence 999999 777 9999999999996 899999999998843 47778775221111 22222211 110000111
Q ss_pred HHhhhcccCCCccccccceeeeeHHHHHHcCCC----CCCCccchHHHHHHHhhCCCeEEEeccc
Q 041333 249 VEQEVGSSTHAFFGFNGTAGVWRIAAVNEAGGW----KDRTTVEDMDLAVRASLKGWKFLYLGTV 309 (513)
Q Consensus 249 ~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~gg~----~~~~~~ED~~l~~rl~~~G~~i~~~~~~ 309 (513)
.... ..... ..++..++||++++++... .....+.|.++..++.++|+++..+|-.
T Consensus 153 ~~~~--~~i~d---p~sG~~a~~R~vl~~l~~~~~~~~~~~fg~eiel~~~a~~~G~rI~EVpig 212 (397)
T 2bo4_A 153 HTEL--SWIEQ---PLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIP 212 (397)
T ss_dssp TSSG--GGCSC---TTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECT
T ss_pred Hhhc--ccccc---CCcccEEEeHHHHHHHhhhcccCcCCCcchHHHHHHHHHHcCCEEEEEECc
Confidence 0000 01111 1244558999999987321 2233678999999999999999988843
No 16
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.19 E-value=7.5e-11 Score=113.53 Aligned_cols=106 Identities=13% Similarity=0.054 Sum_probs=76.8
Q ss_pred CCcEEEEEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHH--HHHHHHHHHhhc-cCccEEEEEcCC-----
Q 041333 96 YPMVLVQIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIK--DMVELECQRWAS-KGINIKYEVRDN----- 167 (513)
Q Consensus 96 ~P~VsIiIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~--~l~~~~~~~~~~-~~~~v~~~~~~~----- 167 (513)
..++|||||||||+.. +++++++|.+.+.++++ |+|+|+|.+.. +++ ++|.+ .+.++.+++..+
T Consensus 52 ~~klSIVVPvYNEe~~---lLesVl~qi~~d~eIIl-VdDGS~D~s~~e~dil----~~~~~~~~~ri~viHQkn~gls~ 123 (391)
T 2wvl_A 52 LEQTAIVVPTRNERLK---LLEGVLSGIPHEALILV-ASNSSPDRFQMERDLL----EEFAHLTERPALIFHQKDPALAE 123 (391)
T ss_dssp HTTEEEEEEESSCCHH---HHHHHHHTSCTTSEEEE-EECCCHHHHHHHHHHH----HHHHHHTTCCEEEEETTCHHHHH
T ss_pred HhceEEEEeccCcHHH---HHHHHHhcCCCCceEEE-EECCCCCChHhHHHHH----HHHHhhcccceEEEeccChHHHH
Confidence 4679999999999974 79999999987666544 77778888843 233 34433 356788887421
Q ss_pred ----------------CCCCChhHHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHH
Q 041333 168 ----------------RKGYKAGALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTI 209 (513)
Q Consensus 168 ----------------~~g~Ka~aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~ 209 (513)
.+.||+.++-.|+..|....+|||.|+|||..++.+..+.+.
T Consensus 124 Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyvk 181 (391)
T 2wvl_A 124 ALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYVR 181 (391)
T ss_dssp HHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHHH
T ss_pred HHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHHH
Confidence 112477778888888733479999999999999777666544
No 17
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=99.00 E-value=1.1e-08 Score=101.55 Aligned_cols=105 Identities=14% Similarity=0.111 Sum_probs=68.4
Q ss_pred CcEEEEEeccCChHHHHHHHHHHHc-CCCCCCeeEEEEEeCCCchh------HHHHHHHHHHHhhccCccEEEEEcCC--
Q 041333 97 PMVLVQIPMFNEREVYQLSIGAACG-LSWPSDRLIIQVLDDSTDLT------IKDMVELECQRWASKGINIKYEVRDN-- 167 (513)
Q Consensus 97 P~VsIiIP~yne~~~l~~~l~sl~~-q~yp~~~i~IiV~Dds~D~t------~~~l~~~~~~~~~~~~~~v~~~~~~~-- 167 (513)
.++|||||+|||++.+ +..+++ ..+ ..++ |+|+|+|+|+| .+ +++..++.. .....+++.++
T Consensus 51 ~~iSVVIP~yNEE~~l---I~~vL~~i~~-~~eI-IvVDDgSrD~tD~~~~~~~-~l~~~~~~~---~~~~~Vl~~~~p~ 121 (394)
T 2zu9_A 51 GKMAVIVPMKNEKLHL---VDGVLKAIPH-KCPI-IIVSNSKREGPNRYKLEVD-LIRHFYNLT---HSKIIMIHQKDPG 121 (394)
T ss_dssp TTEEEEEEESSCCHHH---HHHHHHHSCT-TSCE-EEEECCCCSSSCHHHHHHH-HHHHHHHHH---CCCEEEEETTCHH
T ss_pred CCEEEEEecCcccHHH---HHHHHHcCCC-CcEE-EEEECcCcccccchhhHHH-HHHHHhhcc---ccceEEEecCCcc
Confidence 4699999999999643 343333 233 2343 44777786665 33 333332221 23455555543
Q ss_pred --------------------CCCCChhHHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHH
Q 041333 168 --------------------RKGYKAGALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFL 212 (513)
Q Consensus 168 --------------------~~g~Ka~aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~ 212 (513)
++ ||..|+-.|+..|...++|+|+++|||. ..|..+.+.+..+
T Consensus 122 v~~~~~~~g~~~il~~~~~~r~-GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy 184 (394)
T 2zu9_A 122 LAKAFKEVGYTDILDENGMIRS-GKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDY 184 (394)
T ss_dssp HHHHHHHHTCCTTBCTTSSBCC-SHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHH
T ss_pred hhHHhhhccccccccccccccC-ChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHh
Confidence 34 4999999999988434799999999999 6688777766554
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=98.97 E-value=1.6e-09 Score=106.64 Aligned_cols=117 Identities=14% Similarity=0.193 Sum_probs=80.7
Q ss_pred CcEEEEEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEc---------CC
Q 041333 97 PMVLVQIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVR---------DN 167 (513)
Q Consensus 97 P~VsIiIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~---------~~ 167 (513)
+.++|+|++||.++ ++++|+|+++|+.+....+|+|.||+++++++++++ ++ +.++.++.. ++
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~----~~---~~~I~~~~~~d~~~~~~~~~ 73 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIA----SY---GSAVTHIRQPDLSNIAVQPD 73 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHH----TT---GGGSEEEECSCCCCCCCCTT
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHH----Hc---CCceEEEEcCCccccccchh
Confidence 45779999999999 999999999998554434455777765555554554 22 123554432 22
Q ss_pred CCCCC---------hhHHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHH---HHHHhcCCCeeEEEee
Q 041333 168 RKGYK---------AGALREGMKRGYVKSCDFVVIFDADFQPESDFLTRT---IPFLVHNPQLALVQAR 224 (513)
Q Consensus 168 ~~g~K---------a~aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l---~~~~~~~~~v~~V~~~ 224 (513)
+.|.+ ..++|.+++.+ ++|+++++|+|+.+.||+++-+ ++.++.|+++..|++-
T Consensus 74 N~g~~~y~~ia~h~~~al~~vf~~~---~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa~ 139 (343)
T 1fo8_A 74 HRKFQGYYKIARHYRWALGQIFHNF---NYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAW 139 (343)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHTTS---CCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESC
T ss_pred hcCcccchhHhHHHHHHHHHHHHhc---cCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEecc
Confidence 22211 04677777777 8999999999999999998554 4555778999877653
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=98.12 E-value=8.2e-06 Score=76.32 Aligned_cols=179 Identities=15% Similarity=0.141 Sum_probs=113.7
Q ss_pred CCcEEEEEeccCChHHHHHHHHHHH----cCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCC
Q 041333 96 YPMVLVQIPMFNEREVYQLSIGAAC----GLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGY 171 (513)
Q Consensus 96 ~P~VsIiIP~yne~~~l~~~l~sl~----~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~ 171 (513)
.-+|+||||-+|.++.+...|..+. +|.- ...|+|++...+ ..-.
T Consensus 50 ~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l---~y~I~VieQ~~~----------------------------~~FN 98 (287)
T 3lw6_A 50 VHKMALLVPFRDRFEELLQFVPHMTAFLKRQGV---AHHIFVLNQVDR----------------------------FRFN 98 (287)
T ss_dssp CCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC---EEEEEEEEECSS----------------------------SCCC
T ss_pred cceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCC---ceEEEEEecCCC----------------------------Cccc
Confidence 4489999999999988887776553 3432 233445544321 1122
Q ss_pred ChhHHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHHHHHHhhhcchhhHHh
Q 041333 172 KAGALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMTRLQEMSLDYHFTVEQ 251 (513)
Q Consensus 172 Ka~aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 251 (513)
++..+|.|+..|. ...|++++-|.|.+|..|.... .-|+. ..+ .+...+. +.+.
T Consensus 99 Ra~LlNvGf~ea~-~~~d~~ifHDVDLlP~dd~n~Y------~c~~~---~~P-~Hls~~~----------~~~~----- 152 (287)
T 3lw6_A 99 RASLINVGFQFAS-DVYDYIAMHDVDLLPLNDNLLY------EYPSS---LGP-LHIAGPK----------LHPK----- 152 (287)
T ss_dssp HHHHHHHHHHHSC-TTCCEEEEECTTEEECCTTSCC------CCCCT---TCC-EESSCTT----------TCSS-----
T ss_pred hhheecccHHHHh-ccCCEEEEecccccccCCCccc------cCCCC---CCc-eEEeecc----------ccCC-----
Confidence 6788999999883 3589999999999987552210 01110 001 1111110 0000
Q ss_pred hhcccCCCccccccceeeeeHHHHHHcCCCCCCC---ccchHHHHHHHhhCCCeEEEeccc-c-----cc--c-------
Q 041333 252 EVGSSTHAFFGFNGTAGVWRIAAVNEAGGWKDRT---TVEDMDLAVRASLKGWKFLYLGTV-K-----VK--N------- 313 (513)
Q Consensus 252 ~~~~~~~~~~~~~G~~~~~rr~~l~~~gg~~~~~---~~ED~~l~~rl~~~G~~i~~~~~~-~-----~~--~------- 313 (513)
.....+.|+.++++|+.+.++|||++.. ..||-|+..|+..+|.++...+.. . .. +
T Consensus 153 ------~~Y~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~r 226 (287)
T 3lw6_A 153 ------YHYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKR 226 (287)
T ss_dssp ------CCCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCC
T ss_pred ------CCcCCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCC
Confidence 0112255889999999999999999876 589999999999999998765531 1 11 1
Q ss_pred ccCcCHHHHHHHHHhhhhchhHHH
Q 041333 314 ELPSTFKAYRYQQHRWSCGPANLF 337 (513)
Q Consensus 314 ~~p~~~~~~~~Qr~RW~~G~~~~~ 337 (513)
..|..+.....++.||..+.+..+
T Consensus 227 d~~k~~~~~~~~~~r~~~dGLnsl 250 (287)
T 3lw6_A 227 DTQKCFNQKEMTRKRDHKTGLDNV 250 (287)
T ss_dssp CCCCCTTHHHHHTSCCSSCSGGGC
T ss_pred cccchhhhhhhhcEEccCCCCeee
Confidence 123345556778888888777655
No 20
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=96.98 E-value=0.0017 Score=57.20 Aligned_cols=116 Identities=9% Similarity=0.020 Sum_probs=69.3
Q ss_pred ChhHHHHHHHhccc-CCCcEEEEEcCC---CCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHHHHHHhhhcchh
Q 041333 172 KAGALREGMKRGYV-KSCDFVVIFDAD---FQPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMTRLQEMSLDYHF 247 (513)
Q Consensus 172 Ka~aln~gl~~a~~-~~~d~I~~lDaD---~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~ 247 (513)
-..|+|..+..... .++|+++++||| ...+|+.+.+++. . +.++|+|.....+.+. .+ .....+
T Consensus 37 I~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl~---~--g~DVV~GsYp~K~~~~--~s---~~a~~y-- 104 (203)
T 2c0n_A 37 VAVQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKFN---E--GYDVVCGYYYLKTLRG--YS---VYRKDW-- 104 (203)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHHH---H--TCSEEEEECBCTTSSS--BS---EESSSB--
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHHh---C--CCCEEEEEeeccCCCc--cc---hHHHHH--
Confidence 44566665554221 378999999999 9999999999883 2 4567777654433211 00 000000
Q ss_pred hHHhhhcccCCCccccccceeeeeHHHHHHcC--CC----C---CCCccchHHHHHHHhhCCCeE
Q 041333 248 TVEQEVGSSTHAFFGFNGTAGVWRIAAVNEAG--GW----K---DRTTVEDMDLAVRASLKGWKF 303 (513)
Q Consensus 248 ~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~g--g~----~---~~~~~ED~~l~~rl~~~G~~i 303 (513)
..... + ..+.-..++++++||++++.+- .| + .+..+||..++..+..+|+-+
T Consensus 105 ~~~i~-~---~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~ 165 (203)
T 2c0n_A 105 EKEIF-D---GEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYAL 165 (203)
T ss_dssp CSSCC-C---EECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEE
T ss_pred HHhcc-C---ceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccccccccc
Confidence 00000 0 0122244667899999999863 22 1 123889999999999988876
No 21
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=95.16 E-value=0.1 Score=49.40 Aligned_cols=119 Identities=8% Similarity=0.100 Sum_probs=75.5
Q ss_pred CCCcEEEEEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChh
Q 041333 95 SYPMVLVQIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAG 174 (513)
Q Consensus 95 ~~P~VsIiIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~ 174 (513)
.....||+|-+|+..+.+.+.++.+.+..+- .+++| |=.+...+..+... .........++++..+.+ .-.
T Consensus 26 ~~~~FTvvi~ty~R~~~L~~lv~~~~~~~~v-~~IvV-vWn~~~~~pp~~~~----~~~~~~~vpv~v~~~~~n---sLn 96 (293)
T 1omz_A 26 ALDSFTLIMQTYNRTDLLLRLLNHYQAVPSL-HKVIV-VWNNVGEKGPEELW----NSLGPHPIPVIFKPQTAN---KMR 96 (293)
T ss_dssp CTTCEEEEEEESSCHHHHHHHHHHHTTSTTE-EEEEE-EECCTTCCCTHHHH----HHTCCCSSCEEEEECSSC---CGG
T ss_pred CCCceEEEEEeecccHHHHHHHHHHhcCCCC-CeEEE-EeCCCCCCCChhhc----cccCCCCccEEEEeCCCC---chh
Confidence 3457999999999999999999887665432 24433 33443222222111 112222466777654433 223
Q ss_pred HHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEE
Q 041333 175 ALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWE 226 (513)
Q Consensus 175 aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~ 226 (513)
++-.-.... +.|-|+.+|+|..++.+.|+.......++|+ .+|+...+
T Consensus 97 nRF~p~~~i---~T~AVLslDDDv~l~~~el~faF~vWr~~Pd-RlVGf~~R 144 (293)
T 1omz_A 97 NRLQVFPEV---ETNAVLMVDDDTLISAQDLVFAFSIWQQFPD-QIIGFVPR 144 (293)
T ss_dssp GGGSCCTTC---CSSEEEEECTTEEECHHHHHHHHHHHTTSTT-SEEESCEE
T ss_pred hccCCCccC---CcCEEEEEcCCCCCCHHHHHHHHHHHHHCcc-ceecCchh
Confidence 333333444 8999999999999999999998888878887 35555443
No 22
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=95.15 E-value=0.06 Score=50.49 Aligned_cols=182 Identities=12% Similarity=0.106 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccCCCc
Q 041333 110 EVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVKSCD 189 (513)
Q Consensus 110 ~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~~~d 189 (513)
..+..+++.+.+.. -++++| +.| ++..+... ++ .+.++.+...+...| ..+ +..+++.....+.|
T Consensus 35 Pli~~~l~~l~~~~--i~~VvV-vt~---~~~i~~~~----~~---~g~~v~~~~~~~~~G-t~~-i~~a~~~l~~~~~d 99 (256)
T 3tqd_A 35 PMIQHVYESAIKSG--AEEVVI-ATD---DKRIRQVA----ED---FGAVVCMTSSDHQSG-TER-IAEAAVALGFEDDE 99 (256)
T ss_dssp EHHHHHHHHHHHTT--CSEEEE-EES---CHHHHHHH----HH---TTCEEEECCTTCCSH-HHH-HHHHHHHTTCCTTC
T ss_pred hHHHHHHHHHHhCC--CCEEEE-ECC---HHHHHHHH----HH---cCCeEEEeCCCCCCc-HHH-HHHHHHHhCcCCCC
Confidence 47888888888754 245544 443 23322222 22 245554433333333 443 56666654112579
Q ss_pred EEEEEcCCC-CCChHHHHHHHHHHhcCCCeeEEEeeEEEec----CCCchHHHHH-HhhhcchhhHH-hh-hcccC----
Q 041333 190 FVVIFDADF-QPESDFLTRTIPFLVHNPQLALVQARWEFVN----ADECLMTRLQ-EMSLDYHFTVE-QE-VGSST---- 257 (513)
Q Consensus 190 ~I~~lDaD~-~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n----~~~~~~~~~~-~~~~~~~~~~~-~~-~~~~~---- 257 (513)
.++++++|. .++++.+.+++..+.++++.+++..-....+ .+.+...-.. .-.....|... .+ .+...
T Consensus 100 ~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~d~~g~~l~fsr~pip~~r~~~~~~~ 179 (256)
T 3tqd_A 100 IIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVLNRRNYALYFSHAPIPWGRDTFSDKE 179 (256)
T ss_dssp EEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCEEEECTTSBEEEEESSCSSCCTTTTTCGG
T ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccEEEECCCCEEeEEecCCCCCCCccccccc
Confidence 999999998 5689999999998865555433322221111 0111000000 00000011000 00 00000
Q ss_pred ----CCccccccceeeeeHHHHHHcCCCCCCCccchHHH--HHHHhhCCCeEEEec
Q 041333 258 ----HAFFGFNGTAGVWRIAAVNEAGGWKDRTTVEDMDL--AVRASLKGWKFLYLG 307 (513)
Q Consensus 258 ----~~~~~~~G~~~~~rr~~l~~~gg~~~~~~~ED~~l--~~rl~~~G~~i~~~~ 307 (513)
.....-+.+-.+||+++++....+.... -|..|- ..|+..+|+++....
T Consensus 180 ~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~s~-lE~~e~leqlr~le~G~~i~~~~ 234 (256)
T 3tqd_A 180 NLQLNGSHYRHVGIYAYRVGFLEEYLSWDACP-AEKMEALEQLRILWHGGRIHMVV 234 (256)
T ss_dssp GCCCSSCCEEEEEEEEEEHHHHHHHHHSCCCH-HHHHHTCTTHHHHHTTCCCEEEE
T ss_pred ccccCCcceEEEEEEEcCHHHHHHHHhCCCCc-ccchhhhHHHHHHHCCCeEEEEE
Confidence 0011234667899999999976665432 232221 247788999987765
No 23
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=93.85 E-value=0.54 Score=43.11 Aligned_cols=102 Identities=10% Similarity=0.126 Sum_probs=61.8
Q ss_pred CCcEEEEEeccCCh---HHHHHHHHHHHcCCCCCCeeEEEEEeCCCc--hhHHHHHHHHHHHhhccCccEEEEEcCCCCC
Q 041333 96 YPMVLVQIPMFNER---EVYQLSIGAACGLSWPSDRLIIQVLDDSTD--LTIKDMVELECQRWASKGINIKYEVRDNRKG 170 (513)
Q Consensus 96 ~P~VsIiIP~yne~---~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D--~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g 170 (513)
.|.|-||-|+|... ..+.+.-..+..- |+ -.-| |++|+.+ +.+..+++ +.|...+++..+.+..
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~~V--p~-l~WI-VVEd~~~~~~~v~~lL~-------~sgl~y~HL~~~~~~~ 70 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAELTRLANTFRQV--AQ-LHWI-LVEDAAARSELVSRFLA-------RAGLPSTHLHVPTPRR 70 (246)
T ss_dssp CCCEEEEEEECCSTTHHHHHHHHHHHHTTS--TT-EEEE-EEESSSSCCHHHHHHHH-------HSCSCEEEEECCCCCC
T ss_pred CCEEEEEeCCCCccchhHHHHHHHHHHhcC--Cc-eEEE-EEcCCCCCCHHHHHHHH-------HcCCceEEEecCCccc
Confidence 68899999999997 3455555554433 44 2334 5555333 33333433 3466655554332211
Q ss_pred CC-------hhHHHHHHHhcccC------CCcEEEEEcCCCCCChHHHHHH
Q 041333 171 YK-------AGALREGMKRGYVK------SCDFVVIFDADFQPESDFLTRT 208 (513)
Q Consensus 171 ~K-------a~aln~gl~~a~~~------~~d~I~~lDaD~~~~pd~L~~l 208 (513)
+| ...+|.|++..... ..-+|.|.|+|...+-+.++++
T Consensus 71 ~~~~~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~em 121 (246)
T 2d0j_A 71 YKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEM 121 (246)
T ss_dssp ----CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHH
Confidence 11 46899999876432 2468899999999998888774
No 24
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=93.73 E-value=0.24 Score=46.52 Aligned_cols=92 Identities=14% Similarity=0.132 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccCCCc
Q 041333 110 EVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVKSCD 189 (513)
Q Consensus 110 ~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~~~d 189 (513)
..+..+++.+.+.. -++++| +.| ++..+... ++ .+.++.+...+ ..+|..+ +..+++.....+.|
T Consensus 44 Pmi~~~l~~l~~~~--i~~IvV-~t~---~~~i~~~~----~~---~g~~v~~~~~~-~~~Gt~~-i~~~~~~l~~~~~d 108 (264)
T 3k8d_A 44 PMIVHVLERARESG--AERIIV-ATD---HEDVARAV----EA---AGGEVCMTRAD-HQSGTER-LAEVVEKCAFSDDT 108 (264)
T ss_dssp EHHHHHHHHHHHTT--CSEEEE-EES---CHHHHHHH----HH---TTCEEEECCTT-CCSHHHH-HHHHHHHHTCCTTC
T ss_pred EHHHHHHHHHHhCC--CCEEEE-ECC---HHHHHHHH----HH---cCCEEEEecCC-CCCCHHH-HHHHHHHhccCCCC
Confidence 47888998888764 245544 443 23332222 22 24444333233 3333443 55555543112579
Q ss_pred EEEEEcCCC-CCChHHHHHHHHHHhcCCC
Q 041333 190 FVVIFDADF-QPESDFLTRTIPFLVHNPQ 217 (513)
Q Consensus 190 ~I~~lDaD~-~~~pd~L~~l~~~~~~~~~ 217 (513)
+++++++|. .++++.+++++..+. +++
T Consensus 109 ~vlv~~gD~Pli~~~~i~~li~~~~-~~~ 136 (264)
T 3k8d_A 109 VIVNVQGDEPMIPATIIRQVADNLA-QRQ 136 (264)
T ss_dssp EEEEECTTCTTCCHHHHHHHHHHHH-TSS
T ss_pred EEEEEcCCcccCCHHHHHHHHHHHh-hcC
Confidence 999999998 558999999999884 443
No 25
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=93.40 E-value=0.56 Score=43.68 Aligned_cols=105 Identities=11% Similarity=0.097 Sum_probs=59.4
Q ss_pred CCCCCcEEEEEeccCCh---HHHHHHHHHHHcCCCCCCeeEEEEEeCCC--chhHHHHHHHHHHHhhccCccEEEEEcCC
Q 041333 93 NSSYPMVLVQIPMFNER---EVYQLSIGAACGLSWPSDRLIIQVLDDST--DLTIKDMVELECQRWASKGINIKYEVRDN 167 (513)
Q Consensus 93 ~~~~P~VsIiIP~yne~---~~l~~~l~sl~~q~yp~~~i~IiV~Dds~--D~t~~~l~~~~~~~~~~~~~~v~~~~~~~ 167 (513)
.+..|.|-||-|+|... ..+.+.-..+..- |+ -.-| |++|+. .+.+..+++ +.|...+++..+.
T Consensus 17 ~~~~p~IivVTPTy~R~~Q~a~LtRLa~TL~~V--p~-L~WI-VVEd~~~~t~~va~lL~-------rsGl~y~HL~~~~ 85 (281)
T 3cu0_A 17 RGSHMTIYVVTPTYARLVQKAELVRLSQTLSLV--PR-LHWL-LVEDAEGPTPLVSGLLA-------ASGLLFTHLVVLT 85 (281)
T ss_dssp ----CEEEEEEEECCSTTHHHHHHHHHHHHTTS--SS-EEEE-EEESSSSCCHHHHHHHH-------HHCSEEEEEECCC
T ss_pred CCCCCeEEEEeCCCCCcchhHHHHHHHHHHhcC--Cc-eEEE-EEcCCCCCCHHHHHHHH-------HcCCceEEeccCC
Confidence 45689999999999987 3444444444433 43 2334 455533 233333433 2355555554332
Q ss_pred CCCCC-------------hhHHHHHHHhcc--------cC------CCcEEEEEcCCCCCChHHHHHH
Q 041333 168 RKGYK-------------AGALREGMKRGY--------VK------SCDFVVIFDADFQPESDFLTRT 208 (513)
Q Consensus 168 ~~g~K-------------a~aln~gl~~a~--------~~------~~d~I~~lDaD~~~~pd~L~~l 208 (513)
+..+| ...+|.|++... .. ..-+|.|.|+|...+-+.++++
T Consensus 86 p~~~~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFdem 153 (281)
T 3cu0_A 86 PKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 153 (281)
T ss_dssp C-----------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred CccccccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHHh
Confidence 22211 467999998874 21 2357889999999998888873
No 26
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=92.49 E-value=0.33 Score=45.17 Aligned_cols=183 Identities=16% Similarity=0.154 Sum_probs=89.5
Q ss_pred ChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccCC
Q 041333 108 EREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVKS 187 (513)
Q Consensus 108 e~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~~ 187 (513)
....+..+++++.+.. -++++| +.| ++..+... ++ .+.++.+...+...| .++ ...+++.....+
T Consensus 26 GkPli~~~l~~l~~~~--~~~ivV-v~~---~~~i~~~~----~~---~g~~v~~~~~~~~~G-t~~-~~~~~~~l~~~~ 90 (252)
T 3oam_A 26 GKPMIQWVYEQAMQAG--ADRVII-ATD---DERVEQAV----QA---FGGVVCMTSPNHQSG-TER-LAEVVAKMAIPA 90 (252)
T ss_dssp TEEHHHHHHHHHHHTT--CSEEEE-EES---CHHHHHHH----HH---TTCEEEECCTTCCSH-HHH-HHHHHHHTTCCT
T ss_pred CEEHHHHHHHHHHhCC--CCeEEE-ECC---HHHHHHHH----HH---cCCEEEEcCCCCCCc-HHH-HHHHHHhcCcCC
Confidence 3458888999888765 245544 443 23222222 22 245554443333333 444 344454431115
Q ss_pred CcEEEEEcCCC-CCChHHHHHHHHHHhcC-CCeeEEEeeEE----EecCCCc-hHHHHHHhhhcch------hhHHhhhc
Q 041333 188 CDFVVIFDADF-QPESDFLTRTIPFLVHN-PQLALVQARWE----FVNADEC-LMTRLQEMSLDYH------FTVEQEVG 254 (513)
Q Consensus 188 ~d~I~~lDaD~-~~~pd~L~~l~~~~~~~-~~v~~V~~~~~----~~n~~~~-~~~~~~~~~~~~~------~~~~~~~~ 254 (513)
.|.++++++|. .++++.+.+++..+.++ .++.....+.. +.+++.. .... .+-...++ +.......
T Consensus 91 ~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~~~~~~~~p~~g~vv~d-~~g~v~~fsr~~i~~~~~~~~~ 169 (252)
T 3oam_A 91 DHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITD-KSGYALYFSRATIPWDRDNFAK 169 (252)
T ss_dssp TSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEECCHHHHTCTTSCEEEEC-TTSBEEEEESSCSSCCHHHHHS
T ss_pred CCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecCCHHHhhCCCceEEEEC-CCCeEEEEeCCCCCCCCCcccc
Confidence 79999999998 56899999999988543 23433333321 1111000 0000 00000000 00000000
Q ss_pred cc--CCCccccccceeeeeHHHHHHcCCCCCCC--ccchHHHHHHHhhCCCeEEEec
Q 041333 255 SS--THAFFGFNGTAGVWRIAAVNEAGGWKDRT--TVEDMDLAVRASLKGWKFLYLG 307 (513)
Q Consensus 255 ~~--~~~~~~~~G~~~~~rr~~l~~~gg~~~~~--~~ED~~l~~rl~~~G~~i~~~~ 307 (513)
.. .......+.+-.+|++++++.+-...... ..|..+ ..|+..+|.++...+
T Consensus 170 ~~~~~~~~~~~n~GiY~~~~~~l~~~~~~~~~~~e~~E~le-~lr~l~~G~~i~~~~ 225 (252)
T 3oam_A 170 ADKAIVQPLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLE-QLRVLWHGEKIHVAV 225 (252)
T ss_dssp SSCCCCSCEEEEEEEEEEETTHHHHHHHSCCCHHHHHHTCT-THHHHHTTCCEEEEE
T ss_pred ccccccccceEEEEEEEcCHHHHHHHHcCCCCcccccchhH-HHHHHHCCCeEEEEE
Confidence 00 01122256778899999998865443322 223222 235667899987753
No 27
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=91.72 E-value=0.61 Score=42.95 Aligned_cols=102 Identities=11% Similarity=0.084 Sum_probs=59.9
Q ss_pred CCcEEEEEeccCCh---HHHHHHHHHHHcCCCCCCeeEEEEEeCCC--chhHHHHHHHHHHHhhccCccEEEEEcCCC--
Q 041333 96 YPMVLVQIPMFNER---EVYQLSIGAACGLSWPSDRLIIQVLDDST--DLTIKDMVELECQRWASKGINIKYEVRDNR-- 168 (513)
Q Consensus 96 ~P~VsIiIP~yne~---~~l~~~l~sl~~q~yp~~~i~IiV~Dds~--D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~-- 168 (513)
.|.|-||-|+|... ..+.+.-..+.. -|+- .-| |++|+. .+.+..+++ +.|...+++..+.+
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~~--Vp~L-~WI-VVEd~~~~t~~va~lL~-------~sgl~y~HL~~~~p~~ 70 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAELTRMANTLLH--VPNL-HWL-VVEDAPRRTPLTARLLR-------DTGLNYTHLHVETPRN 70 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHHTT--SSSE-EEE-EEESSSSCCHHHHHHHH-------HHCCEEEEEECCCCHH
T ss_pred CCEEEEEeCCCCccchhHHHHHHhhhhcc--CCce-EEE-EEeCCCCCCHHHHHHHH-------HcCCceEEeecCCCcc
Confidence 68899999999997 355555555533 2533 334 444433 233333333 22555444433311
Q ss_pred ---------CCC--ChhHHHHHHHhccc------CCCcEEEEEcCCCCCChHHHHHH
Q 041333 169 ---------KGY--KAGALREGMKRGYV------KSCDFVVIFDADFQPESDFLTRT 208 (513)
Q Consensus 169 ---------~g~--Ka~aln~gl~~a~~------~~~d~I~~lDaD~~~~pd~L~~l 208 (513)
... -...+|.|++.... ...-+|.|.|+|...+-+.++++
T Consensus 71 ~~~~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~em 127 (253)
T 1v84_A 71 YKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEM 127 (253)
T ss_dssp HHCC-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHH
T ss_pred ccccccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHH
Confidence 000 13579999988732 13467899999999998888874
No 28
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=91.09 E-value=1.4 Score=40.96 Aligned_cols=97 Identities=16% Similarity=0.212 Sum_probs=58.1
Q ss_pred CChHHHHHHH-HHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhccc
Q 041333 107 NEREVYQLSI-GAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYV 185 (513)
Q Consensus 107 ne~~~l~~~l-~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~ 185 (513)
+....+..++ +++.+.. -++++| +.|+ +...... + ..+.++.+. +++..+|. +++..+++....
T Consensus 24 ~GkPli~~~i~~~~~~~~--~~~vvV-vt~~---~~i~~~~----~---~~g~~v~~~-~~~~~~Gt-~~i~~a~~~~~~ 88 (253)
T 4fcu_A 24 HDRPMILRVVDQAKKVEG--FDDLCV-ATDD---ERIAEIC----R---AEGVDVVLT-SADHPSGT-DRLSEVARIKGW 88 (253)
T ss_dssp TTEEHHHHHHHHHHTCTT--CCEEEE-EESC---HHHHHHH----H---TTTCCEEEC-CTTCCCHH-HHHHHHHHHHTC
T ss_pred CCeEhHHHHHHHHHHhcC--CCEEEE-ECCH---HHHHHHH----H---HcCCeEEEe-CCCCCChH-HHHHHHHHhcCc
Confidence 4445888999 8887643 345544 4442 2222222 2 224555433 23333322 356667766521
Q ss_pred CCCcEEEEEcCCC-CCChHHHHHHHHHHhcCCCe
Q 041333 186 KSCDFVVIFDADF-QPESDFLTRTIPFLVHNPQL 218 (513)
Q Consensus 186 ~~~d~I~~lDaD~-~~~pd~L~~l~~~~~~~~~v 218 (513)
...|+++++++|. .++++.+.+++..+.++++.
T Consensus 89 ~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~ 122 (253)
T 4fcu_A 89 DADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNC 122 (253)
T ss_dssp CTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTC
T ss_pred CCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCC
Confidence 2469999999998 66899999999988666543
No 29
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=87.16 E-value=3.2 Score=36.26 Aligned_cols=91 Identities=19% Similarity=0.139 Sum_probs=54.4
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccC
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVK 186 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~ 186 (513)
+....++.+++.+.+.. -++++| |.+.. ++. +.+ .. . ..++.++..+....+-.+++..|++... .
T Consensus 29 ~g~pll~~~l~~l~~~~--~~~i~v-v~~~~-~~~---~~~----~~-~-~~~~~~~~~~~~~~g~~~~i~~al~~~~-~ 94 (197)
T 2wee_A 29 RDTTVLGATLDVARQAG--FDQLIL-TLGGA-ASA---VRA----AM-A-LDGTDVVVVEDVERGCAASLRVALARVH-P 94 (197)
T ss_dssp TTEEHHHHHHHHHHHTT--CSEEEE-EECTT-HHH---HHH----HS-C-CTTSEEEECC----CCHHHHHHHHTTSC-T
T ss_pred CCccHHHHHHHHHHhcC--CCcEEE-EeCCC-HHH---HHH----Hh-c-cCCCEEEECCCcccCHHHHHHHHHHHhc-c
Confidence 44568889999888764 234444 44332 222 211 11 1 1244555443322236788888887751 1
Q ss_pred CCcEEEEEcCCC-CCChHHHHHHHHH
Q 041333 187 SCDFVVIFDADF-QPESDFLTRTIPF 211 (513)
Q Consensus 187 ~~d~I~~lDaD~-~~~pd~L~~l~~~ 211 (513)
+.|.++++++|. .++++.+++++..
T Consensus 95 ~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 95 RATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp TEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred cCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 368999999998 5689999999887
No 30
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=87.15 E-value=3.4 Score=37.37 Aligned_cols=90 Identities=10% Similarity=0.094 Sum_probs=54.7
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEc-CCCCCCChhHHHHHHHhccc
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVR-DNRKGYKAGALREGMKRGYV 185 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~-~~~~g~Ka~aln~gl~~a~~ 185 (513)
+....+..+++++.+. . ++++| +.++ +...... + +. +.++.. +...++.+++. .+++..
T Consensus 25 ~g~pli~~~l~~~~~~--~-~~i~v-~~~~---~~i~~~~----~----~~--~~~~~~~~~~~~g~~~~~-~~~~~~-- 84 (234)
T 2y6p_A 25 LGKPLIRWVVEGLVKT--G-ERVIL-ATDS---ERVKEVV----E----DL--CEVFLTPSDLPSGSDRVL-YVVRDL-- 84 (234)
T ss_dssp TTEEHHHHHHHHHHTT--T-SCEEE-EESC---HHHHHHH----T----TT--SEEEECCTTCCSHHHHHH-HHHTTC--
T ss_pred CCEEHHHHHHHHHHHh--C-CEEEE-ECCh---HHHHHHH----H----hc--eEEEECCcccccchHHHH-HHHHhC--
Confidence 3447888999988876 2 34544 4433 2222111 1 11 333333 22234455555 466666
Q ss_pred CCCcEEEEEcCCC-CCChHHHHHHHHHHhcCCC
Q 041333 186 KSCDFVVIFDADF-QPESDFLTRTIPFLVHNPQ 217 (513)
Q Consensus 186 ~~~d~I~~lDaD~-~~~pd~L~~l~~~~~~~~~ 217 (513)
+.|.++++++|. ..+++.+.+++..+.++++
T Consensus 85 -~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~ 116 (234)
T 2y6p_A 85 -DVDLIINYQGDEPFVYEEDIKLIFRELEKGER 116 (234)
T ss_dssp -CCSEEEECCTTCCCCCHHHHHHHHHHHHHTCS
T ss_pred -CCCEEEEecCCcCcCCHHHHHHHHHHHHhCCC
Confidence 789999999999 7788999999988754444
No 31
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=84.98 E-value=7.9 Score=33.66 Aligned_cols=91 Identities=11% Similarity=0.063 Sum_probs=55.5
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccC
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVK 186 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~ 186 (513)
+....++.+++.+.+.. -++++| |.+.. ++..+.. . . ..++.++..+....+-.+++..|++... .
T Consensus 29 ~g~pli~~~l~~l~~~~--~~~i~v-v~~~~-~~~~~~~-------~-~-~~~~~~~~~~~~~~g~~~~i~~al~~~~-~ 94 (199)
T 2waw_A 29 GDTTLLGATLAMARRCP--FDQLIV-TLGGA-ADEVLEK-------V-E-LDGLDIVLVDDAGLGCSSSLKSALTWVD-P 94 (199)
T ss_dssp TTEEHHHHHHHHHHTSS--CSEEEE-EECTT-HHHHHHH-------S-C-CTTSEEEECCCCCTTCCCHHHHHHHTSC-T
T ss_pred CccCHHHHHHHHHHhCC--CCcEEE-EeCCC-HHHHHHH-------h-c-cCCCEEEECCCcccCHHHHHHHHHHhhh-c
Confidence 44578899999988764 234444 44332 2222111 1 1 1234444433322235778999998762 1
Q ss_pred CCcEEEEEcCCCC-CChHHHHHHHHH
Q 041333 187 SCDFVVIFDADFQ-PESDFLTRTIPF 211 (513)
Q Consensus 187 ~~d~I~~lDaD~~-~~pd~L~~l~~~ 211 (513)
+.|.++++++|.. ++++.+++++..
T Consensus 95 ~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 95 TAEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp TCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred cCCeEEEEeCCcccCCHHHHHHHHhh
Confidence 3689999999986 488999998887
No 32
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=83.27 E-value=1.3 Score=41.97 Aligned_cols=108 Identities=7% Similarity=-0.021 Sum_probs=63.5
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHHHHHHhhhcchhhHHhhhcccCCCcccccc
Q 041333 186 KSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMTRLQEMSLDYHFTVEQEVGSSTHAFFGFNG 265 (513)
Q Consensus 186 ~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 265 (513)
++.+|++..|+|+.+..+-|.+++..+ ||+-....|......+... ...... . ........++..|
T Consensus 92 ~~~~Wf~~~DDDtyv~~~nL~~~L~~~--d~~~~~YiG~~~~~~~~~~-~~~~~~---~--------~~~~~~~~y~~GG 157 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVNPKALLQLLKTF--PQDRDVYVGKPSLNRPIHA-SELQSK---Q--------RTKLVRFWFATGG 157 (280)
T ss_dssp HTCSEEEEEETTEEECHHHHHHHHTTS--CTTSCCEEECEEC-------------------------------CCEECGG
T ss_pred CCCcEEEEeCCCcEEcHHHHHHHHHhC--CCCCCEEEEEeccCccccc-cccCcc---c--------cccccccCcccCC
Confidence 389999999999999999898888876 4443333333321111000 000000 0 0000111244558
Q ss_pred ceeeeeHHHHHHcCCCC----------CCCccchHHHHHHHh-hCCCeEEEec
Q 041333 266 TAGVWRIAAVNEAGGWK----------DRTTVEDMDLAVRAS-LKGWKFLYLG 307 (513)
Q Consensus 266 ~~~~~rr~~l~~~gg~~----------~~~~~ED~~l~~rl~-~~G~~i~~~~ 307 (513)
++.+++|++++++..+. .....||..++.-+. +.|.+....+
T Consensus 158 aG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~ 210 (280)
T 2j0a_A 158 AGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSP 210 (280)
T ss_dssp GCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECT
T ss_pred CEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecc
Confidence 89999999998754211 112458999999998 8898877654
No 33
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=82.61 E-value=16 Score=33.05 Aligned_cols=91 Identities=11% Similarity=0.043 Sum_probs=54.9
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcC-CCCCCChhHHHHHHHhccc
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRD-NRKGYKAGALREGMKRGYV 185 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~-~~~g~Ka~aln~gl~~a~~ 185 (513)
+....+..+++.+.+.... ++++| |.++ +..+.. +++ .++.++.++ +..++-+++ -.+++..
T Consensus 25 ~g~pli~~~i~~~~~~~~~-~~ivv-v~~~---~~i~~~----~~~-----~~~~~~~~~~~~~~g~~~~-~~~~~~~-- 87 (245)
T 1h7e_A 25 VGKPMIQHVYERALQVAGV-AEVWV-ATDD---PRVEQA----VQA-----FGGKAIMTRNDHESGTDRL-VEVMHKV-- 87 (245)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CEEEE-EESC---HHHHHH----HHH-----TTCEEEECCSCCSSHHHHH-HHHHHHS--
T ss_pred CCchHHHHHHHHHHhCCCC-CeEEE-ECCc---HHHHHH----HHH-----cCCeEEeCCCccCCcHHHH-HHHHHhC--
Confidence 4456889999998876432 34444 4443 222222 222 234555543 222334443 3556665
Q ss_pred CCCcEEEEEcCCCC-CChHHHHHHHHHHhcC
Q 041333 186 KSCDFVVIFDADFQ-PESDFLTRTIPFLVHN 215 (513)
Q Consensus 186 ~~~d~I~~lDaD~~-~~pd~L~~l~~~~~~~ 215 (513)
+.|.++++++|.- .+++.+++++..+.++
T Consensus 88 -~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~ 117 (245)
T 1h7e_A 88 -EADIYINLQGDEPMIRPRDVETLLQGMRDD 117 (245)
T ss_dssp -CCSEEEECCTTCTTCCHHHHHHHHHHHHHC
T ss_pred -CCCEEEEEcCCcCcCCHHHHHHHHHHHHhC
Confidence 6799999999985 5899999999887544
No 34
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=81.54 E-value=4.9 Score=40.53 Aligned_cols=98 Identities=14% Similarity=0.193 Sum_probs=59.9
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccC
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVK 186 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~ 186 (513)
+....++.+++++.+.. -+++.| |.... ++..+... + +.++.++..+...| -++++..|++...
T Consensus 34 ~g~pli~~~l~~l~~~~--~~~i~v-v~~~~-~~~i~~~~----~-----~~~~~~v~~~~~~g-~~~~i~~~~~~~~-- 97 (459)
T 4fce_A 34 AGKPMVQHVIDAAMKLG--AQHVHL-VYGHG-GELLKKTL----A-----DPSLNWVLQAEQLG-TGHAMQQAAPHFA-- 97 (459)
T ss_dssp TTEEHHHHHHHHHHHHT--CSCEEE-EESSC-HHHHHHHC--------------CEEECSSCCC-HHHHHHHHGGGSC--
T ss_pred CCeeHHHHHHHHHHhCC--CCcEEE-EeCCC-HHHHHHHh----c-----cCCcEEEeCCCCCC-cHHHHHHHHHhcC--
Confidence 34468888999888764 244444 44322 22222121 1 13455665554555 5788889988871
Q ss_pred CCcEEEEEcCCC-CCChHHHHHHHHHHhcCCCeeEE
Q 041333 187 SCDFVVIFDADF-QPESDFLTRTIPFLVHNPQLALV 221 (513)
Q Consensus 187 ~~d~I~~lDaD~-~~~pd~L~~l~~~~~~~~~v~~V 221 (513)
+.|.++++++|. .++++.++++++.+. +.+..+.
T Consensus 98 ~~~~~lv~~~D~P~i~~~~i~~l~~~~~-~~~~~~~ 132 (459)
T 4fce_A 98 DDEDILMLYGDVPLISVDTLQRLLAAKP-EGGIGLL 132 (459)
T ss_dssp TTSEEEEEETTCTTCCHHHHHHHHHHCC-TTSEEEE
T ss_pred CCCcEEEEeCCcccCCHHHHHHHHHHHh-hCCEEEE
Confidence 358999999998 578999999998873 3343333
No 35
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=80.82 E-value=12 Score=34.15 Aligned_cols=100 Identities=11% Similarity=0.052 Sum_probs=59.0
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhccc-
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYV- 185 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~- 185 (513)
+....+..+++++.+.... ++++| |.+....+..+.. .+++. .+..+.++... .+ ..++...|++....
T Consensus 30 ~Gkpll~~~l~~~~~~~~~-~~ivv-v~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~--~~-~~~sv~~al~~l~~~ 99 (246)
T 3f1c_A 30 NGKPIIVHTVEKFILNTRF-DKILI-SSPKEWMNHAEDN----IKKYI-SDDRIVVIEGG--ED-RNETIMNGIRFVEKT 99 (246)
T ss_dssp TTEEHHHHHHHHHHTCTTC-SEEEE-EECGGGHHHHHHH----HHHHC-CCTTEEEEECC--SS-HHHHHHHHHHHHHHH
T ss_pred CCeeHHHHHHHHHHcCCCC-CEEEE-EeCHHHHHHHHHH----HHHhC-CCCCEEEECCC--Cc-hHHHHHHHHHHHhhh
Confidence 3447899999998876432 34544 4443211112222 23331 12345555321 22 45677777776521
Q ss_pred ---CCCcEEEEEcCCC-CCChHHHHHHHHHHhcCC
Q 041333 186 ---KSCDFVVIFDADF-QPESDFLTRTIPFLVHNP 216 (513)
Q Consensus 186 ---~~~d~I~~lDaD~-~~~pd~L~~l~~~~~~~~ 216 (513)
...|+|++.|+|. .++++.+++++..+.+++
T Consensus 100 ~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~ 134 (246)
T 3f1c_A 100 YGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETG 134 (246)
T ss_dssp TCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTS
T ss_pred hcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcC
Confidence 1368999999996 669999999999885443
No 36
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=80.75 E-value=2 Score=37.97 Aligned_cols=84 Identities=15% Similarity=0.130 Sum_probs=53.2
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCC-CCCChhHHHHHHHhccc
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNR-KGYKAGALREGMKRGYV 185 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~-~g~Ka~aln~gl~~a~~ 185 (513)
+....++.+++.+.+. +++| |..+. . +.+. ++.. .++ ++.++.. .| -..++..|++..
T Consensus 26 ~g~pll~~~l~~l~~~-----~ivv-v~~~~-~---~~~~-----~~~~--~~~-~v~~~~~~~G-~~~si~~al~~~-- 84 (197)
T 3d5n_A 26 DNTPIIMRTIRIYGDL-----EKII-IVGKY-V---NEML-----PLLM--DQI-VIYNPFWNEG-ISTSLKLGLRFF-- 84 (197)
T ss_dssp SSSBHHHHHHHHTTTS-----BCCE-EECTT-H---HHHG-----GGCT--TSC-EEECTTGGGC-HHHHHHHHHHHT--
T ss_pred CceEHHHHHHHHHHhC-----CEEE-EECCC-H---HHHH-----HHhc--CCE-EEECCCCCCC-HHHHHHHHHHhh--
Confidence 4456888898887655 3444 44332 1 1121 1111 234 4544432 34 567888888887
Q ss_pred CCC-cEEEEEcCCC-CCChHHHHHHHHHH
Q 041333 186 KSC-DFVVIFDADF-QPESDFLTRTIPFL 212 (513)
Q Consensus 186 ~~~-d~I~~lDaD~-~~~pd~L~~l~~~~ 212 (513)
.. |.++++++|. .++++.+++++..+
T Consensus 85 -~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 85 -KDYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp -TTSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred -ccCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 44 8999999998 56899999998876
No 37
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=80.65 E-value=10 Score=38.86 Aligned_cols=109 Identities=21% Similarity=0.172 Sum_probs=67.8
Q ss_pred CCcEEEEEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhH
Q 041333 96 YPMVLVQIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGA 175 (513)
Q Consensus 96 ~P~VsIiIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~a 175 (513)
.|+ +++|..|.+ .|...|+++.+... .++.| |+. ...+..+...+...+ ..+.++.|+..+++.| -++|
T Consensus 30 ~pK--~l~pv~gkp-~i~~~l~~~~~~g~--~~i~v-v~~-~~~~~i~~~~~~~~~---~~~~~i~~~~q~~~lG-Ta~A 98 (501)
T 3st8_A 30 TPK--VLHTLAGRS-MLSHVLHAIAKLAP--QRLIV-VLG-HDHQRIAPLVGELAD---TLGRTIDVALQDRPLG-TGHA 98 (501)
T ss_dssp SCG--GGCEETTEE-HHHHHHHHHHHHCC--SEEEE-EEC-TTHHHHHHHHHHHHH---HHTSCCEEEECSSCCC-HHHH
T ss_pred CCH--HHeEECChh-HHHHHHHHHHhCCC--CEEEE-EeC-CCHHHHHHHHHHHHH---hcCCcEEEEEcCCCCC-cHHH
Confidence 355 367888876 77788888776542 34544 433 222333333332222 2367899998888877 6899
Q ss_pred HHHHHHhcccCCCcEEEEEcCC-CCCChHHHHHHHHHHhcC
Q 041333 176 LREGMKRGYVKSCDFVVIFDAD-FQPESDFLTRTIPFLVHN 215 (513)
Q Consensus 176 ln~gl~~a~~~~~d~I~~lDaD-~~~~pd~L~~l~~~~~~~ 215 (513)
+..+.+.......+.++++..| ....++.+.+++.....+
T Consensus 99 v~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~ 139 (501)
T 3st8_A 99 VLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAV 139 (501)
T ss_dssp HHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhc
Confidence 9998887632223345555555 566889999998876433
No 38
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=79.98 E-value=11 Score=35.65 Aligned_cols=95 Identities=15% Similarity=0.232 Sum_probs=59.0
Q ss_pred EEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhc-cCc-cEEEEEcCCCCCCChhHHHHH
Q 041333 102 QIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWAS-KGI-NIKYEVRDNRKGYKAGALREG 179 (513)
Q Consensus 102 iIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~-~~~-~v~~~~~~~~~g~Ka~aln~g 179 (513)
++|..+....+..+++.+.+. -.+++| |.+....+. +.+ .+.. .+. ++.++..+...| -++++..+
T Consensus 30 ll~i~gg~pli~~~l~~l~~~---~~~i~v-v~~~~~~~~---i~~----~~~~~~~~~~~~~i~~~~~~g-t~~al~~a 97 (308)
T 2qh5_A 30 FLKLFDHKSLFELSFKRNASL---VDETLI-VCNEKHYFL---ALE----EIKNEIKNKSVGFLLESLSKN-TANAIALS 97 (308)
T ss_dssp GCTTBTTBCHHHHHHHHHHTT---CSEEEE-EEEGGGHHH---HHH----HTTTTCSSCEEEEEEESSCCC-HHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHcc---CCCEEE-EEChhHHHH---HHH----HHHHhhCCCccEEEeCCCCCC-hHHHHHHH
Confidence 345544566888999988876 245544 444321111 211 1111 233 556666555555 68888888
Q ss_pred HHhcccCC-CcEEEEEcCCCCC-ChHHHHHHHHH
Q 041333 180 MKRGYVKS-CDFVVIFDADFQP-ESDFLTRTIPF 211 (513)
Q Consensus 180 l~~a~~~~-~d~I~~lDaD~~~-~pd~L~~l~~~ 211 (513)
.... . .++++++.+|... +++.+.+++..
T Consensus 98 ~~~l---~~~~~~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 98 ALMS---DKEDLLIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp HHTS---CTTSEEEEEESSCBCCCHHHHHHHHHH
T ss_pred HHHh---CCCCeEEEEcCCccccCHHHHHHHHHH
Confidence 8776 4 5679999999887 78888888865
No 39
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=79.75 E-value=7.9 Score=34.51 Aligned_cols=85 Identities=7% Similarity=0.053 Sum_probs=53.2
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccC
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVK 186 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~ 186 (513)
+....++.+++.+.+. +++| |.++ ++..+.+. . ..++.++..+....+...++..|++.+
T Consensus 24 ~G~pli~~~~~~l~~~-----~vvv-v~~~--~~~~~~~~--------~-~~~~~~v~d~~~~~G~~~si~~gl~~~--- 83 (208)
T 3ngw_A 24 CGKKLIEWVLEKYSPF-----QTVF-VCRD--EKQAEKLS--------S-RYEAEFIWDLHKGVGSIAGIHAALRHF--- 83 (208)
T ss_dssp TTEEHHHHHHHHHTTS-----EEEE-ECSS--HHHHHHHH--------T-TSCSCEECCTTCCCSHHHHHHHHHHHH---
T ss_pred CCeeHHHHHHHHhcCC-----CEEE-EECC--HHHHHHHH--------H-hcCCeEEecCCCCCChHHHHHHHHHHc---
Confidence 5667899999988765 4433 4422 22222111 1 123444543332223557888888876
Q ss_pred CCcEEEEEcCCC-CCChHHHHHHHHHHh
Q 041333 187 SCDFVVIFDADF-QPESDFLTRTIPFLV 213 (513)
Q Consensus 187 ~~d~I~~lDaD~-~~~pd~L~~l~~~~~ 213 (513)
.|++ ++++|. .++++.+++++..+.
T Consensus 84 -~~~v-v~~~D~P~i~~~~i~~l~~~~~ 109 (208)
T 3ngw_A 84 -GSCV-VAAIDMPFVKPEVLEHLYKEGE 109 (208)
T ss_dssp -SSEE-EEETTCTTCCHHHHHHHHHHHH
T ss_pred -CCCE-EEECCccCCCHHHHHHHHHHhh
Confidence 5889 999997 459999999998874
No 40
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=77.04 E-value=18 Score=32.67 Aligned_cols=97 Identities=7% Similarity=0.099 Sum_probs=56.2
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhccc-
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYV- 185 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~- 185 (513)
+....+..+++++.+.... ++++| |.+....+..+.. . .. ++.++... .+ ...+...|++....
T Consensus 33 ~Gkpll~~~l~~~~~~~~~-~~ivV-v~~~~~~~~~~~~----~----~~--~v~~v~gg--~~-r~~sv~~gl~~~~~~ 97 (231)
T 3q80_A 33 DGQTLIERAVDGLLDSGVV-DTVVV-AVPADRTDEARQI----L----GH--RAMIVAGG--SN-RTDTVNLALTVLSGT 97 (231)
T ss_dssp TTEEHHHHHHHHHHHTSCC-CEEEE-EECGGGHHHHHHH----H----GG--GCEEEECC--SS-HHHHHHHHHGGGC--
T ss_pred CCeEHHHHHHHHHHhCCCC-CeEEE-ECChHHHHHHHHH----h----cC--CeEEEcCC--Cc-hHHHHHHHHHHhhhc
Confidence 4556889999998765322 34444 4443211111211 1 11 34444311 11 35677788887621
Q ss_pred CCCcEEEEEcCCC-CCChHHHHHHHHHHhcCCCe
Q 041333 186 KSCDFVVIFDADF-QPESDFLTRTIPFLVHNPQL 218 (513)
Q Consensus 186 ~~~d~I~~lDaD~-~~~pd~L~~l~~~~~~~~~v 218 (513)
...|++++.|+|. .++++.+++++..+.++.+.
T Consensus 98 ~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~~~~~ 131 (231)
T 3q80_A 98 AEPEFVLVHDAARALTPPALVARVVEALRDGYAA 131 (231)
T ss_dssp -CCSEEEECCTTCTTCCHHHHHHHHHHHHTTCSE
T ss_pred CCCCEEEEEcCCcCCCCHHHHHHHHHHHhhcCCe
Confidence 0158999999996 55999999999988442343
No 41
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=76.12 E-value=9.7 Score=34.12 Aligned_cols=92 Identities=13% Similarity=0.152 Sum_probs=53.1
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCC--CC--CChhHHHHHHHh
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNR--KG--YKAGALREGMKR 182 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~--~g--~Ka~aln~gl~~ 182 (513)
+....+..+++.+.+...- ++++| +.++ +..+.. +++ .+. .++.++.. .+ +...++..|++.
T Consensus 27 ~gkpll~~~l~~~~~~~~~-~~ivv-v~~~---~~i~~~----~~~---~~~--~~~~~~~~~~~~~~g~~~sv~~~l~~ 92 (228)
T 1ezi_A 27 NGISLLGHTINAAISSKCF-DRIIV-STDG---GLIAEE----AKN---FGV--EVVLRPAELASDTASSISGVIHALET 92 (228)
T ss_dssp TTEEHHHHHHHHHHHHCCC-SEEEE-EESC---HHHHHH----HHH---TTC--EEEECCC------CHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHhCCCC-CEEEE-ECCC---HHHHHH----HHH---cCC--EEEeCchHHcCCCCChHHHHHHHHHH
Confidence 3446788888888765321 34444 4432 222222 222 233 33444321 12 235667777776
Q ss_pred cccCCCcEEEEEcCCCC-CChHHHHHHHHHHh
Q 041333 183 GYVKSCDFVVIFDADFQ-PESDFLTRTIPFLV 213 (513)
Q Consensus 183 a~~~~~d~I~~lDaD~~-~~pd~L~~l~~~~~ 213 (513)
. ..+.|.++++++|.- .+++.+++++..+.
T Consensus 93 ~-~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~ 123 (228)
T 1ezi_A 93 I-GSNSGTVTLLQPTSPLRTGAHIREAFSLFD 123 (228)
T ss_dssp H-TCCSEEEEECCTTCTTCCHHHHHHHHTTCC
T ss_pred h-CCCCCEEEEEcCCCCcCCHHHHHHHHHHHH
Confidence 6 113689999999975 58999999998773
No 42
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=76.09 E-value=3.4 Score=38.70 Aligned_cols=56 Identities=16% Similarity=0.057 Sum_probs=42.7
Q ss_pred CccEEEEEcCCCCCCChhHHHHHHHhcccCCCcEEEEEcCCCCCChH----HHHHHHHHHhcCC
Q 041333 157 GINIKYEVRDNRKGYKAGALREGMKRGYVKSCDFVVIFDADFQPESD----FLTRTIPFLVHNP 216 (513)
Q Consensus 157 ~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~~~d~I~~lDaD~~~~pd----~L~~l~~~~~~~~ 216 (513)
+.++.++..+...| -++++..+++.. +.|.++++.+|...+++ .+.+++..+.++.
T Consensus 94 ~~~i~~~~~~~~~G-t~~al~~a~~~l---~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~ 153 (281)
T 3juk_A 94 KCCFSYVRQKQMKG-LGHAILTGEALI---GNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQ 153 (281)
T ss_dssp HCEEEEEECSSCCC-HHHHHHHTHHHH---CSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHC
T ss_pred CccEEEEecCCCCC-cHHHHHHHHHHc---CCCCEEEEeCCeeccCccchHHHHHHHHHHHHcC
Confidence 35666776665555 678888888887 66889999999988888 8999998774433
No 43
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=75.88 E-value=6.1 Score=36.68 Aligned_cols=179 Identities=10% Similarity=-0.002 Sum_probs=89.8
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccC
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVK 186 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~ 186 (513)
+....+..+++++.+.. -++++| |.+....+...... ......+.++.+...+...| -++++..+++..
T Consensus 53 ~g~pli~~~l~~l~~~g--~~~iiv-v~~~~~~~~~~~~~----~~~~~~~~~i~~~~~~~~~G-~~~al~~a~~~~--- 121 (269)
T 4ecm_A 53 GRYPMIYHAVYKLKQCD--ITDIMI-ITGKEHMGDVVSFL----GSGQEFGVSFTYRVQDKAGG-IAQALGLCEDFV--- 121 (269)
T ss_dssp TTEEHHHHHHHHHHHTT--CCEEEE-EECTTTHHHHHHHH----TTSGGGTCEEEEEECSSCCC-HHHHHHTTHHHH---
T ss_pred CCEEHHHHHHHHHHHCC--CCEEEE-ECChhhHHHHHHHH----hhccccCceEEEeeCCccCc-HHHHHHHHHHhc---
Confidence 34568889999988764 234444 44432222222111 11111245666665554445 678888888877
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHhcC-CCeeEEEeeEEEecCCCchHHHHHHhhhcchhhHHhhhcc-cCCCccccc
Q 041333 187 SCDFVVIFDADFQPESDFLTRTIPFLVHN-PQLALVQARWEFVNADECLMTRLQEMSLDYHFTVEQEVGS-STHAFFGFN 264 (513)
Q Consensus 187 ~~d~I~~lDaD~~~~pd~L~~l~~~~~~~-~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 264 (513)
+.|.++++.+|.... ..+.+++..+.++ .++.++..+. .+ .+-+.. +..+.. .+...... ........+
T Consensus 122 ~~~~~lv~~~D~~~~-~~l~~l~~~~~~~~~~~~~~~~~~--~~--~~~~g~---v~~d~g-~v~~~~ekp~~~~~~~~~ 192 (269)
T 4ecm_A 122 GNDRMVVILGDNIFS-DDIRPYVEEFTNQKEGAKVLLQSV--DD--PERFGV---ANIQNR-KIIEIEEKPKEPKSSYAV 192 (269)
T ss_dssp TTSEEEEEETTEEES-SCSHHHHHHHHTSSSSEEEEEEEC--SC--GGGSEE---EEEETT-EEEEEEESCSSCSCSEEE
T ss_pred CCCcEEEEeCCccCc-cCHHHHHHHHHhcCCCeEEEEEEC--CC--CCCceE---EEEcCC-EEEEEEECCCCCCCcEEE
Confidence 678999999998665 5577777766332 2333333221 11 110000 000000 00000000 001112245
Q ss_pred cceeeeeHHHHHHcCCCCCCCc--cchHHHHHHHhhCCCeEEEe
Q 041333 265 GTAGVWRIAAVNEAGGWKDRTT--VEDMDLAVRASLKGWKFLYL 306 (513)
Q Consensus 265 G~~~~~rr~~l~~~gg~~~~~~--~ED~~l~~rl~~~G~~i~~~ 306 (513)
++..+++++.++.+.......- .|=.++...+...| ++...
T Consensus 193 ~Giy~~~~~~l~~l~~~~~~~~ge~~l~d~l~~l~~~g-~v~~~ 235 (269)
T 4ecm_A 193 TGIYLYDSKVFSYIKELKPSARGELEITDINNWYLKRG-VLTYN 235 (269)
T ss_dssp EEEEEECTTHHHHHTSCCBCTTSCBCHHHHHHHHHHTT-CEEEE
T ss_pred EEEEEECHHHHHhhhhcCCCCCCeeeHHHHHHHHHHcC-CEEEE
Confidence 7778899999877654322111 12245556666777 55444
No 44
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=75.87 E-value=24 Score=32.36 Aligned_cols=92 Identities=14% Similarity=0.142 Sum_probs=52.4
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcC-CCCCCChhHHHHHHHhccc
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRD-NRKGYKAGALREGMKRGYV 185 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~-~~~g~Ka~aln~gl~~a~~ 185 (513)
+....+..+++++.+... ++++| |.++ +..... +++ .++.++.++ ...++.+ .+..+++....
T Consensus 25 ~gkpli~~~l~~l~~~~~--~~ivv-v~~~---~~i~~~----~~~-----~~~~~~~~~~~~~~g~~-~~~~~~~~l~~ 88 (262)
T 1vic_A 25 KGKPMIQHVFEKALQSGA--SRVII-ATDN---ENVADV----AKS-----FGAEVCMTSVNHNSGTE-RLAEVVEKLAI 88 (262)
T ss_dssp TTEEHHHHHHHHHHHTTC--SEEEE-EESC---HHHHHH----HHH-----TTCEEEECCCSSCCHHH-HHHHHHHHTTC
T ss_pred CCeEHHHHHHHHHHhCCC--ceEEE-ECCc---HHHHHH----HHh-----cCCEEEECCccccCChH-HHHHHHHHhcc
Confidence 344788999999887653 45444 4432 222222 222 234445443 2233333 33334433211
Q ss_pred CCCcEEEEEcCCC-CCChHHHHHHHHHHhc
Q 041333 186 KSCDFVVIFDADF-QPESDFLTRTIPFLVH 214 (513)
Q Consensus 186 ~~~d~I~~lDaD~-~~~pd~L~~l~~~~~~ 214 (513)
.+.|.++++++|. .++++.+++++..+.+
T Consensus 89 ~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 118 (262)
T 1vic_A 89 PDNEIIVNIQGDEPLIPPVIVRQVADNLAK 118 (262)
T ss_dssp CTTCEEEECCTTCTTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCcCccCHHHHHHHHHHHHh
Confidence 2579999999998 4689999999987743
No 45
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=75.71 E-value=7.4 Score=34.36 Aligned_cols=84 Identities=10% Similarity=0.061 Sum_probs=53.0
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCC-CCChhHHHHHHHhccc
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRK-GYKAGALREGMKRGYV 185 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~-g~Ka~aln~gl~~a~~ 185 (513)
+....++.+++.+... .++++| |.++. . +... .. ++.++..+... .+-..++..|++..
T Consensus 31 ~G~pli~~~l~~l~~~---~~~ivv-v~~~~-~---~~~~--------~~--~~~~v~~~~~~~~G~~~si~~~l~~~-- 90 (201)
T 1e5k_A 31 NGKPLWQHVADALMTQ---LSHVVV-NANRH-Q---EIYQ--------AS--GLKVIEDSLADYPGPLAGMLSVMQQE-- 90 (201)
T ss_dssp TTEEHHHHHHHHHHHH---CSCEEE-ECSSS-H---HHHH--------TT--SCCEECCCTTCCCSHHHHHHHHHHHC--
T ss_pred CceeHHHHHHHHHHhh---CCEEEE-EcCCc-H---HHHh--------hc--CCeEEecCCCCCCCHHHHHHHHHHhC--
Confidence 3446788888887742 234433 43321 1 1111 12 34444443222 23678888999988
Q ss_pred CCCcEEEEEcCCC-CCChHHHHHHHHH
Q 041333 186 KSCDFVVIFDADF-QPESDFLTRTIPF 211 (513)
Q Consensus 186 ~~~d~I~~lDaD~-~~~pd~L~~l~~~ 211 (513)
+.|+++++++|. .++++.+++++..
T Consensus 91 -~~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 91 -AGEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp -CSSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred -CCCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 789999999998 5689999998876
No 46
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=74.88 E-value=11 Score=37.77 Aligned_cols=90 Identities=13% Similarity=0.156 Sum_probs=57.5
Q ss_pred ChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccCC
Q 041333 108 EREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVKS 187 (513)
Q Consensus 108 e~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~~ 187 (513)
....++.+++++.+.. -+++.| +.+.. .+. +.+ .+ .. .++.++..+...| -++++..+++... +
T Consensus 32 gkpli~~~l~~l~~~~--~~~iiv-v~~~~-~~~---i~~----~~-~~-~~~~~v~~~~~~g-~~~~~~~~~~~~~--~ 95 (456)
T 2v0h_A 32 GKPMVKHVIDTAHQLG--SENIHL-IYGHG-GDL---MRT----HL-AN-EQVNWVLQTEQLG-TAHAVQQAAPFFK--D 95 (456)
T ss_dssp TEEHHHHHHHHHHHTT--CSCEEE-EECTT-HHH---HHH----HT-TT-CCCEEEECSCCCC-HHHHHHHHGGGCC--T
T ss_pred CccHHHHHHHHHHhCC--CCcEEE-EeCCC-HHH---HHH----Hh-hc-CCcEEEeCCCCCC-cHHHHHHHHHhcC--C
Confidence 3468889999988764 234444 44432 222 211 11 11 1456665554445 5778888887761 2
Q ss_pred CcEEEEEcCCC-CCChHHHHHHHHHHh
Q 041333 188 CDFVVIFDADF-QPESDFLTRTIPFLV 213 (513)
Q Consensus 188 ~d~I~~lDaD~-~~~pd~L~~l~~~~~ 213 (513)
.|.++++++|. .++++.+++++..+.
T Consensus 96 ~~~vlv~~~D~P~i~~~~i~~l~~~~~ 122 (456)
T 2v0h_A 96 NENIVVLYGDAPLITKETLEKLIEAKP 122 (456)
T ss_dssp TSEEEEEETTCTTCCHHHHHHHHHHCC
T ss_pred CCeEEEEcCCcceeCHHHHHHHHHHHh
Confidence 79999999998 468899999988763
No 47
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=74.47 E-value=39 Score=30.13 Aligned_cols=92 Identities=13% Similarity=0.086 Sum_probs=54.2
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCC-----CCCCChhHHHHHHH
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDN-----RKGYKAGALREGMK 181 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~-----~~g~Ka~aln~gl~ 181 (513)
+....+..+++.+.+...- ++++| +.| ++..+... ++ .+. .++.+++ ..+ -.+++..|++
T Consensus 26 ~Gkpli~~~i~~~~~~~~~-~~ivv-~~~---~~~i~~~~----~~---~g~--~~~~~~~~~~~~~~~-~~~~v~~al~ 90 (229)
T 1qwj_A 26 AGVPLIGWVLRAALDAGVF-QSVWV-STD---HDEIENVA----KQ---FGA--QVHRRSSETSKDSST-SLDAIVEFLN 90 (229)
T ss_dssp TTEEHHHHHHHHHHHHTCC-SEEEE-EES---CHHHHHHH----HH---TTC--EEEECCGGGSSTTCC-HHHHHHHHHT
T ss_pred CCEEHHHHHHHHHHhCCCc-CEEEE-ECC---hHHHHHHH----HH---cCC--EEEeChhhhcCCCCc-HHHHHHHHHH
Confidence 3445788888888765321 34444 443 22222222 22 233 3444431 222 2356677777
Q ss_pred hcccCCCcEEEEEcCCCC-CChHHHHHHHHHHhcC
Q 041333 182 RGYVKSCDFVVIFDADFQ-PESDFLTRTIPFLVHN 215 (513)
Q Consensus 182 ~a~~~~~d~I~~lDaD~~-~~pd~L~~l~~~~~~~ 215 (513)
.. ...|.++++++|.- ++++.+.+++..+.++
T Consensus 91 ~~--~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~ 123 (229)
T 1qwj_A 91 YH--NEVDIVGNIQATSPCLHPTDLQKVAEMIREE 123 (229)
T ss_dssp TC--TTCSEEEEECTTCTTCCHHHHHHHHHHHHSS
T ss_pred hc--CCCCEEEEecCCCCcCCHHHHHHHHHHHHhC
Confidence 65 25799999999985 5899999999887443
No 48
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=73.36 E-value=12 Score=32.88 Aligned_cols=78 Identities=13% Similarity=0.110 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccCCCc
Q 041333 110 EVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVKSCD 189 (513)
Q Consensus 110 ~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~~~d 189 (513)
..++.+++.+.+. .++++| |.++..+ + .+. ++.++..+....+-.+++..|++.. +.|
T Consensus 41 pll~~~l~~l~~~---~~~i~v-v~~~~~~---~--------~~~----~~~~v~~~~~~~g~~~~i~~al~~~---~~~ 98 (201)
T 2e8b_A 41 KVIERVYETAKSV---FKEVYI-VAKDREK---F--------SFL----NAPVVLDEFEESASIIGLYTALKHA---KEE 98 (201)
T ss_dssp HHHHHHHHHHHTT---CSEEEE-EESCSGG---G--------GGG----TCCEEECCCSSCCHHHHHHHHHHHC---SSS
T ss_pred EHHHHHHHHHHHh---CCEEEE-EeCcHHH---h--------hcC----CceEEecCCCCCCcHHHHHHHHHHc---CCC
Confidence 4677788877665 245544 4443221 1 111 3445544432223678899999988 789
Q ss_pred EEEEEcCCCC-CChHHHHH-HH
Q 041333 190 FVVIFDADFQ-PESDFLTR-TI 209 (513)
Q Consensus 190 ~I~~lDaD~~-~~pd~L~~-l~ 209 (513)
.++++++|.- ++++.+++ ++
T Consensus 99 ~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 99 NVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp EEEEEETTCTTCCHHHHHHHHH
T ss_pred CEEEEeCCcCcCCHHHHHHHHh
Confidence 9999999985 48888888 76
No 49
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=72.98 E-value=31 Score=30.65 Aligned_cols=96 Identities=16% Similarity=0.130 Sum_probs=56.5
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccC
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVK 186 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~ 186 (513)
+....++.+++.+.+.... ++++| |..... +..+.+ .++ ....+.++ +...| ...++..|++.....
T Consensus 32 ~gkpli~~~l~~l~~~~~~-~~ivv-v~~~~~-~~~~~~-----~~~--~~~~i~~~--~~~~~-~~~si~~~l~~~~~~ 98 (231)
T 1vgw_A 32 GSKTVLEHVLGIFERHEAV-DLTVV-VVSPED-TFADKV-----QTA--FPQVRVWK--NGGQT-RAETVRNGVAKLLET 98 (231)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CEEEE-ECCTTC-STHHHH-----HHH--CTTSEEEC--CCCSS-HHHHHHHHHHHHHHH
T ss_pred CCeEHHHHHHHHHHcCCCC-CeEEE-EECccH-HHHHHH-----Hhc--CCCceEEE--cCCCc-HHHHHHHHHHHHhhh
Confidence 4557899999998865422 34433 443222 233322 121 11245443 22333 567777777765210
Q ss_pred ----CCcEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 041333 187 ----SCDFVVIFDADF-QPESDFLTRTIPFLVHN 215 (513)
Q Consensus 187 ----~~d~I~~lDaD~-~~~pd~L~~l~~~~~~~ 215 (513)
..|.++++++|. .++++.+.+++..+.++
T Consensus 99 ~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~ 132 (231)
T 1vgw_A 99 GLAAETDNILVHDAARCCLPSEALARLIEQAGNA 132 (231)
T ss_dssp SSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTC
T ss_pred ccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhc
Confidence 368999999997 45899999999887443
No 50
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=70.44 E-value=11 Score=35.56 Aligned_cols=99 Identities=11% Similarity=0.153 Sum_probs=55.8
Q ss_pred EEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHH
Q 041333 102 QIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMK 181 (513)
Q Consensus 102 iIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~ 181 (513)
++|.++. ..+..+++.+.... -.++.| |..+...+..+... .+-.+.+.++.+...+...| -++++..|.+
T Consensus 27 llpi~gk-pli~~~l~~l~~~g--i~~I~v-v~~~~~~~~i~~~l----~~g~~~g~~i~~~~~~~~~G-~~~al~~a~~ 97 (293)
T 1fxo_A 27 LLPVYDK-PMIYYPLSTLMLAG--IREILI-ISTPQDTPRFQQLL----GDGSNWGLDLQYAVQPSPDG-LAQAFLIGES 97 (293)
T ss_dssp GSEETTE-ETTHHHHHHHHHTT--CCEEEE-EECTTTHHHHHHHH----TTSGGGTCEEEEEECSSCCC-GGGHHHHTHH
T ss_pred eCeECCE-eHHHHHHHHHHHCC--CCEEEE-EeccccHHHHHHHH----hcccccCceEEEeeCCCCCC-HHHHHHHHHH
Confidence 3566665 56777888777654 234433 44332223222222 11111245666776555555 6888888888
Q ss_pred hcccCCCcEEEEEcCCCCCChHHHHHHHHHH
Q 041333 182 RGYVKSCDFVVIFDADFQPESDFLTRTIPFL 212 (513)
Q Consensus 182 ~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~ 212 (513)
.. ..|-++++.+|....+.-+.+++..+
T Consensus 98 ~i---~~~~~~lv~gD~~~~~~~l~~~l~~~ 125 (293)
T 1fxo_A 98 FI---GNDLSALVLGDNLYYGHDFHELLGSA 125 (293)
T ss_dssp HH---TTSEEEEEETTEEEECTTHHHHHHHH
T ss_pred Hh---CCCCEEEEECChhccCccHHHHHHHH
Confidence 77 54555555599766435577777766
No 51
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=67.65 E-value=10 Score=33.96 Aligned_cols=95 Identities=9% Similarity=0.087 Sum_probs=54.6
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccC
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVK 186 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~ 186 (513)
+....+..+++.+.+.... ++++| |.+.. .+. +.+...++ .+.++.++. + ..| ..+++..|++... .
T Consensus 30 ~g~pli~~~l~~l~~~~~~-~~ivv-v~~~~-~~~---~~~~~~~~---~~~~v~~~~-~-~~~-~~~sv~~al~~~~-~ 96 (228)
T 2yc3_A 30 LGQPIALYSFFTFSRMPEV-KEIVV-VCDPF-FRD---IFEEYEES---IDVDLSFAI-P-GKE-RQDSVYSGLQEID-V 96 (228)
T ss_dssp TTEEHHHHHHHHHHHCTTE-EEEEE-ECCGG-GHH---HHHTTTTT---SSSEEEEEC-C-CSS-HHHHHHHHHTTSC-T
T ss_pred CCEEHHHHHHHHHHcCCCC-CeEEE-EEChH-HHH---HHHHHHHh---CCCcEEEEC-C-CCC-HHHHHHHHHHhhc-c
Confidence 3446888899988765221 23333 43322 111 21111111 123455543 2 223 5677888887761 1
Q ss_pred CCcEEEEEcCCC-CCChHHHHHHHHHHhc
Q 041333 187 SCDFVVIFDADF-QPESDFLTRTIPFLVH 214 (513)
Q Consensus 187 ~~d~I~~lDaD~-~~~pd~L~~l~~~~~~ 214 (513)
..++++++|+|. .++++.+++++..+.+
T Consensus 97 ~~~~vl~~d~d~P~~~~~~i~~l~~~~~~ 125 (228)
T 2yc3_A 97 NSELVCIHDSARPLVNTEDVEKVLKDGSA 125 (228)
T ss_dssp TCSEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCccCCHHHHHHHHHHHHh
Confidence 358999999996 6689999999987743
No 52
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=65.50 E-value=22 Score=33.43 Aligned_cols=99 Identities=11% Similarity=0.170 Sum_probs=55.3
Q ss_pred EEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHH
Q 041333 102 QIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMK 181 (513)
Q Consensus 102 iIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~ 181 (513)
++|.++. ..+..+++.+.... -.++.| |......+..+... .+..+.+.++.+...+...| -++++..|.+
T Consensus 28 llpi~gk-pli~~~l~~l~~~g--i~~Iiv-v~~~~~~~~i~~~l----~~g~~~g~~i~~~~~~~~~G-~~~al~~a~~ 98 (295)
T 1lvw_A 28 LLPIYDK-PMIYYPLSVLMLAG--IRDILI-ISTPRDLPLYRDLL----GDGSQFGVRFSYRVQEEPRG-IADAFIVGKD 98 (295)
T ss_dssp GSEETTE-ETTHHHHHHHHHTT--CCEEEE-EECTTTHHHHHHHH----TTSGGGTSEEEEEECSSCCC-GGGHHHHTHH
T ss_pred ecEECCe-eHHHHHHHHHHHCC--CCeEEE-EeccchHHHHHHHh----hhccccCceEEEeeCCCCCC-hHHHHHHHHH
Confidence 4566665 56777888777654 234433 44322222222221 11111245666776665555 6888888887
Q ss_pred hcccCCCcEEEEEcCCCCCChHHHHHHHHHH
Q 041333 182 RGYVKSCDFVVIFDADFQPESDFLTRTIPFL 212 (513)
Q Consensus 182 ~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~ 212 (513)
... +.+++++. +|....+.-+.+++...
T Consensus 99 ~i~--~~~~~lv~-gD~~~~~~~l~~~l~~~ 126 (295)
T 1lvw_A 99 FIG--DSKVALVL-GDNVFYGHRFSEILRRA 126 (295)
T ss_dssp HHT--TSCEEEEE-TTCCEECTTHHHHHHHH
T ss_pred HhC--CCcEEEEE-CCccccCcCHHHHHHHH
Confidence 761 34566655 89776335667777766
No 53
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=65.36 E-value=32 Score=30.79 Aligned_cols=94 Identities=15% Similarity=0.189 Sum_probs=56.5
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccC
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVK 186 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~ 186 (513)
+....++.+++.+.+.... ++++| |.+...+. ...+ +.+ ...++.++. + ..| ...++..|++...
T Consensus 33 ~g~pll~~~i~~l~~~~~~-~~ivv-v~~~~~~~-~~~~-----~~~--~~~~v~~~~-~-~~g-~~~~i~~al~~~~-- 97 (236)
T 1i52_A 33 GNQTILEHSVHALLAHPRV-KRVVI-AISPGDSR-FAQL-----PLA--NHPQITVVD-G-GDE-RADSVLAGLKAAG-- 97 (236)
T ss_dssp TTEEHHHHHHHHHHTSTTE-EEEEE-EECTTCCS-GGGS-----GGG--GCTTEEEEE-C-CSS-HHHHHHHHHHTST--
T ss_pred CCEEHHHHHHHHHHhCCCC-CeEEE-EeCccHHH-HHHH-----Hhc--CCCCEEEEC-C-CCC-HHHHHHHHHHhcC--
Confidence 4456888999988765321 24433 44433222 2211 111 112455543 2 233 5677888888761
Q ss_pred CCcEEEEEcCCCC-CChHHHHHHHHHHhcC
Q 041333 187 SCDFVVIFDADFQ-PESDFLTRTIPFLVHN 215 (513)
Q Consensus 187 ~~d~I~~lDaD~~-~~pd~L~~l~~~~~~~ 215 (513)
+.|.++++++|.- ++++.+++++..+.++
T Consensus 98 ~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~ 127 (236)
T 1i52_A 98 DAQWVLVHDAARPCLHQDDLARLLALSETS 127 (236)
T ss_dssp TCSEEEECCTTCTTCCHHHHHHHHGGGGTC
T ss_pred CCCEEEEEcCccccCCHHHHHHHHHHHHhc
Confidence 3799999999974 5899999999887443
No 54
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=64.79 E-value=23 Score=31.61 Aligned_cols=100 Identities=9% Similarity=0.075 Sum_probs=55.3
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhc-cCccEEEEEcCCCCCCChhHHHHHHHhccc
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWAS-KGINIKYEVRDNRKGYKAGALREGMKRGYV 185 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~-~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~ 185 (513)
+....+..+++++.+.... ++++| |.+....+..+.. .+++.- -..+..+. +...| ...++..|++....
T Consensus 29 ~g~pli~~~l~~l~~~~~~-~~i~v-v~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~-~~~~i~~~l~~~~~ 99 (236)
T 2vsh_A 29 GDRPILIHTIEKFVLEPSI-EKIVV-GVHGDWVSHAEDL----VDKYLPLYKERIIIT--KGGAD-RNTSIKNIIEAIDA 99 (236)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CCEEE-EECGGGHHHHHHH----HHHHCGGGGGGEEEE--ECCSS-HHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHcCCCC-CeEEE-EeCHHHHHHHHHH----HHhccccccCceEEE--CCCCc-hHHHHHHHHHHHHh
Confidence 3457889999988865322 34444 4443221222222 222210 00122222 11122 45667777776521
Q ss_pred --C--CCcEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 041333 186 --K--SCDFVVIFDADF-QPESDFLTRTIPFLVHN 215 (513)
Q Consensus 186 --~--~~d~I~~lDaD~-~~~pd~L~~l~~~~~~~ 215 (513)
. ..|+++++++|. .++++.+++++..+.++
T Consensus 100 ~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 134 (236)
T 2vsh_A 100 YRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNH 134 (236)
T ss_dssp HSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHS
T ss_pred hccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhc
Confidence 1 248999999998 67899999999887444
No 55
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=64.64 E-value=31 Score=30.39 Aligned_cols=90 Identities=11% Similarity=0.158 Sum_probs=54.1
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccC
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVK 186 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~ 186 (513)
+....++.+++.+.+.... ++++| |.++. + .+.+.+ +.. +.++.++... .+ ...++..|++.. .
T Consensus 28 ~g~pli~~~l~~l~~~~~~-~~i~v-v~~~~-~--~~~~~~-----~~~-~~~v~~~~~~--~~-~~~~i~~al~~~--~ 91 (223)
T 2xwl_A 28 GGTPLLEHALSGLRASGVI-DRIVI-AVPPA-L--TDESKL-----VFG-GEDSVIVSGG--VD-RTESVALALEAA--G 91 (223)
T ss_dssp TTEEHHHHHHHHHHHHSCC-SEEEE-EECGG-G--HHHHHH-----HTC-BTTEEEEECC--SS-HHHHHHHHHTTC--T
T ss_pred CCeEHHHHHHHHHhcCCCC-CeEEE-EEccc-H--HHHHHH-----Hhc-cCCeEEEcCC--CC-HHHHHHHHHHhc--C
Confidence 3446788888888764322 34444 44331 1 111211 111 3456555432 23 466778888765 2
Q ss_pred CCcEEEEEcCCC-CCChHHHHHHHHHH
Q 041333 187 SCDFVVIFDADF-QPESDFLTRTIPFL 212 (513)
Q Consensus 187 ~~d~I~~lDaD~-~~~pd~L~~l~~~~ 212 (513)
+.|+++++++|. .++++.+++++..+
T Consensus 92 ~~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 92 DAEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp TCSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CCCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 568999999998 56899999999877
No 56
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=63.77 E-value=12 Score=35.31 Aligned_cols=104 Identities=15% Similarity=0.144 Sum_probs=62.4
Q ss_pred EeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHH---HHHHhhc-------------cCccEEEEEcC
Q 041333 103 IPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVEL---ECQRWAS-------------KGINIKYEVRD 166 (513)
Q Consensus 103 IP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~---~~~~~~~-------------~~~~v~~~~~~ 166 (513)
+|.-+ ...+..+++.+.+.. -++++| |.+.. .+..+...+. ..++..+ .+.++.++..+
T Consensus 40 l~i~g-kpli~~~l~~l~~~g--~~~i~v-v~~~~-~~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~i~~~~~~ 114 (297)
T 2ux8_A 40 LPVVD-RPLIQYAVDEAVEAG--IEQMIF-VTGRG-KSALEDHFDIAYELEATMAARGKSLDVLDGTRLKPGNIAYVRQQ 114 (297)
T ss_dssp CEETT-EEHHHHHHHHHHHTT--CCEEEE-EECTT-CHHHHHHTSCCHHHHHHHHTTTCCGGGGTTSCCSTTSEEEEECC
T ss_pred eeECC-eEHHHHHHHHHHhCC--CCEEEE-EeCCC-HHHHHHHHhhhhhhhhhhhhccchhhhhhhcccCCCceEEEeCC
Confidence 34434 468888999888764 234444 44433 2222222110 0000000 24567777655
Q ss_pred CCCCCChhHHHHHHHhcccCCCcEEEEEcCCCCCC--hHHHHHHHHHHhcC
Q 041333 167 NRKGYKAGALREGMKRGYVKSCDFVVIFDADFQPE--SDFLTRTIPFLVHN 215 (513)
Q Consensus 167 ~~~g~Ka~aln~gl~~a~~~~~d~I~~lDaD~~~~--pd~L~~l~~~~~~~ 215 (513)
...| -++++..+.+.. +.|.++++.+|.... +..+++++....++
T Consensus 115 ~~~G-t~~al~~a~~~~---~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~ 161 (297)
T 2ux8_A 115 EPMG-LGHAVWCARDIV---GDEPFAVLLPDDFMFGQPGCLKQMVDAYNKV 161 (297)
T ss_dssp SCCC-HHHHHHTTHHHH---CSSCEEEECTTEEEESSSCHHHHHHHHHHHH
T ss_pred CCCC-hHHHHHHHHHHc---CCCcEEEEeCCeecCCChHHHHHHHHHHHhc
Confidence 5555 677888887776 668899999998877 67899998877433
No 57
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=61.40 E-value=7.3 Score=35.10 Aligned_cols=87 Identities=15% Similarity=0.098 Sum_probs=50.8
Q ss_pred ChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccCC
Q 041333 108 EREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVKS 187 (513)
Q Consensus 108 e~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~~ 187 (513)
....++.+++.+.+. -+++.| |. ...++..+ ...++ .+.++.++..+....|-++++..|++.. +
T Consensus 44 g~pli~~~l~~l~~~---~~~i~v-v~-~~~~~~~~----~~~~~---~~~~~~~v~~~~~~~g~~~~i~~a~~~~---~ 108 (232)
T 2xme_A 44 GCEIILRTMKLLSPH---VSEFII-VA-SRYADDID----AFLKD---KGFNYKIVRHDRPEKGNGYSLLVAKNHV---E 108 (232)
T ss_dssp TEEHHHHHHHHHGGG---EEEEEE-EE-STTHHHHH----HHHTT---SCCCEEEEECSCGGGCHHHHHHTTGGGC---C
T ss_pred CEEHHHHHHHHHHHh---CCEEEE-Ee-CChHHHHH----HHHHh---cCCcEEEEECCCCCCCcHHHHHHHHHHC---C
Confidence 346888888888765 234444 44 32222212 11111 2446777765443222567777788776 5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHH
Q 041333 188 CDFVVIFDADFQPESDFLTRTIP 210 (513)
Q Consensus 188 ~d~I~~lDaD~~~~pd~L~~l~~ 210 (513)
.+ ++++.+|...+++.+++++.
T Consensus 109 ~~-~lv~~~D~p~~~~~~~~l~~ 130 (232)
T 2xme_A 109 DR-FILTMGDHVYSQQFIEKAVR 130 (232)
T ss_dssp SS-EEEEETTEEECHHHHHHHTT
T ss_pred CC-EEEEcCCcccCHHHHHHHHh
Confidence 44 56788998778888887654
No 58
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=61.08 E-value=27 Score=35.05 Aligned_cols=96 Identities=8% Similarity=0.095 Sum_probs=59.4
Q ss_pred EeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHh
Q 041333 103 IPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKR 182 (513)
Q Consensus 103 IP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~ 182 (513)
+|.-+ ...++.+++.+.+.. -+++.| |.+.. + +.+.+ +... ++.++..+...| -++++..+++.
T Consensus 34 ~~i~g-kpli~~~l~~l~~~g--~~~iiv-v~~~~-~---~~i~~-----~~~~--~i~~v~~~~~~G-~~~sl~~a~~~ 97 (468)
T 1hm9_A 34 HKVAG-ISMLEHVFRSVGAIQ--PEKTVT-VVGHK-A---ELVEE-----VLAG--QTEFVTQSEQLG-TGHAVMMTEPI 97 (468)
T ss_dssp SEETT-EEHHHHHHHHHHTTC--CSEEEE-EECTT-H---HHHHH-----SSSS--SSEEEECSSCCC-HHHHHHTTHHH
T ss_pred eEECC-ccHHHHHHHHHHhcC--CCCEEE-EECCC-H---HHHHH-----HhCC--CcEEEeCCccCC-hHHHHHHHHHH
Confidence 34434 478899999988764 245444 44332 2 22211 1111 456665554444 67788778777
Q ss_pred cccCCCcEEEEEcCCCC-CChHHHHHHHHHHhcC
Q 041333 183 GYVKSCDFVVIFDADFQ-PESDFLTRTIPFLVHN 215 (513)
Q Consensus 183 a~~~~~d~I~~lDaD~~-~~pd~L~~l~~~~~~~ 215 (513)
.. ...|.++++++|.. +.++.+++++..+.++
T Consensus 98 ~~-~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~ 130 (468)
T 1hm9_A 98 LE-GLSGHTLVIAGDTPLITGESLKNLIDFHINH 130 (468)
T ss_dssp HT-TCCSEEEEEETTCTTCCHHHHHHHHHHHHHT
T ss_pred hc-cCCCeEEEEeCCccccCHHHHHHHHHHHHhc
Confidence 61 12689999999985 6889999999877443
No 59
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=61.03 E-value=19 Score=33.91 Aligned_cols=55 Identities=15% Similarity=-0.014 Sum_probs=39.7
Q ss_pred CccEEEEEcCCCCCCChhHHHHHHHhcccCCCcEEEEEcCCCCCC----hH---HHHHHHHHHhcC
Q 041333 157 GINIKYEVRDNRKGYKAGALREGMKRGYVKSCDFVVIFDADFQPE----SD---FLTRTIPFLVHN 215 (513)
Q Consensus 157 ~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~~~d~I~~lDaD~~~~----pd---~L~~l~~~~~~~ 215 (513)
+.++.++..+...| -++++..+.+.. ..|.++++.+|...+ ++ .+.+++....++
T Consensus 101 ~~~i~~~~~~~~~G-t~~al~~a~~~~---~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~ 162 (302)
T 2e3d_A 101 HVTIMQVRQGLAKG-LGHAVLCAHPVV---GDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDET 162 (302)
T ss_dssp TCEEEEEECSSCCC-HHHHHHHTHHHH---CSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHH
T ss_pred CcceEEeeCCccCC-HHHHHHHHHHHc---CCCcEEEEcCCccccCccccchHHHHHHHHHHHHhc
Confidence 44566666555555 678888888877 567899999998776 45 688888876433
No 60
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=60.40 E-value=38 Score=31.82 Aligned_cols=100 Identities=14% Similarity=0.116 Sum_probs=58.0
Q ss_pred EEecc-CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcC--------------
Q 041333 102 QIPMF-NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRD-------------- 166 (513)
Q Consensus 102 iIP~y-ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~-------------- 166 (513)
++|.- +....+..+++.+.+.. -.+++| |......+..+.... +.+ ..+.++.++..+
T Consensus 25 l~~ig~~g~pli~~~l~~~~~~~--~~~i~v-v~~~~~~~~~~~~~~---~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~ 97 (303)
T 3pnn_A 25 LDGIGPGGDTIMDYSVYDAIRAG--FGRLVF-VIRHSFEKEFREKIL---TKY-EGRIPVELVFQELDRLPEGFSCPEGR 97 (303)
T ss_dssp CCCCSTTSCCHHHHHHHHHHHHT--CCEEEE-EECGGGHHHHHHHTH---HHH-TTTSCEEEEECCTTCCCTTCCCCTTC
T ss_pred EeEcCCCCeeHHHHHHHHHHHCC--CCeEEE-EcCchHHHHHHHHHH---HHh-ccCCcEEEEecccccccccccccccc
Confidence 34552 34468888888877653 234444 443221122222221 111 234667777655
Q ss_pred -CCCCCChhHHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHh
Q 041333 167 -NRKGYKAGALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLV 213 (513)
Q Consensus 167 -~~~g~Ka~aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~ 213 (513)
...| -++|+..+.+.. +.++ +++.+|...+++.+++++....
T Consensus 98 ~~~~G-t~~al~~a~~~i---~~~~-lV~~gD~l~~~~~~~~l~~~~~ 140 (303)
T 3pnn_A 98 EKPWG-TNHAVLMGRDAI---REPF-AVINADDFYGRNGFEVLARKLM 140 (303)
T ss_dssp CSCCC-HHHHHHTTTTTC---CSCE-EEEESSCBCCHHHHHHHHHHHH
T ss_pred cccCC-cHHHHHHHHHhc---CCCE-EEEECCeecCHHHHHHHHHHHH
Confidence 2334 567777666665 5555 5567999889999999998874
No 61
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=55.91 E-value=26 Score=34.21 Aligned_cols=88 Identities=11% Similarity=0.211 Sum_probs=54.8
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccC
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVK 186 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~ 186 (513)
+....++.+++.+.+.... ++++| |.+ .++. + + ++. .+ +.++ +...| ...++..|++..
T Consensus 29 ~GkPLi~~~l~~l~~~~~~-~~IvV-vt~--~~~~---i-~----~~~-~~--v~~v--~~g~g-~~~sv~~aL~~l--- 87 (371)
T 1w55_A 29 GNDPLWLYATKNLSSFYPF-KKIVV-TSS--NITY---M-K----KFT-KN--YEFI--EGGDT-RAESLKKALELI--- 87 (371)
T ss_dssp BTEEHHHHHHHHHHTTSCC-SCEEE-EES--CHHH---H-H----TTC-SS--SEEE--ECCSS-HHHHHHHHHTTC---
T ss_pred CCeEHHHHHHHHHHccCCC-CeEEE-EcC--CHHH---H-H----HHh-CC--CEEE--eCCCC-hHHHHHHHHHhc---
Confidence 3456888999988763322 34444 554 2221 1 1 111 11 4444 11222 457888888887
Q ss_pred CCcEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 041333 187 SCDFVVIFDADF-QPESDFLTRTIPFLVHN 215 (513)
Q Consensus 187 ~~d~I~~lDaD~-~~~pd~L~~l~~~~~~~ 215 (513)
+.|+++++|+|. .++++.+++++..+.++
T Consensus 88 ~~d~vlv~~~D~Pli~~~~i~~li~~~~~~ 117 (371)
T 1w55_A 88 DSEFVMVSDVARVLVSKNLFDRLIENLDKA 117 (371)
T ss_dssp CSSEEEEEETTCTTCCHHHHHHHHTTGGGC
T ss_pred CCCeEEEEeCCcccCCHHHHHHHHHHHHhc
Confidence 689999999997 55899999999887433
No 62
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=53.94 E-value=23 Score=33.31 Aligned_cols=99 Identities=10% Similarity=0.126 Sum_probs=53.9
Q ss_pred EEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHH
Q 041333 102 QIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMK 181 (513)
Q Consensus 102 iIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~ 181 (513)
++|.++. ..+..+++.+.... -.++.| |......+..+... .+..+.+.++.+...+...| -++++..|.+
T Consensus 28 llpi~gk-pli~~~l~~l~~~g--i~~I~v-v~~~~~~~~i~~~l----~~g~~~g~~i~~~~~~~~~G-~~~al~~a~~ 98 (296)
T 1mc3_A 28 LLPIYDK-PMIYYPLSVLMLAG--IREILI-ITTPEDKGYFQRLL----GDGSEFGIQLEYAEQPSPDG-LAQAFIIGET 98 (296)
T ss_dssp GSEETTE-ETTHHHHHHHHHTT--CCEEEE-EECTTTHHHHHHHH----TTSGGGTCEEEEEECSSCCC-STHHHHHTHH
T ss_pred eeEECCe-eHHHHHHHHHHhCC--CCcEEE-EechhHHHHHHHHH----hcccccCceEEEeccCCCCC-HHHHHHHHHH
Confidence 3466665 56777777777643 234433 44322222222221 11111245666776665555 6788888887
Q ss_pred hcccCCCcEEEEEcCCCCCChHHHHHHHHHH
Q 041333 182 RGYVKSCDFVVIFDADFQPESDFLTRTIPFL 212 (513)
Q Consensus 182 ~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~ 212 (513)
... +.+++++. +|....+..+.+++...
T Consensus 99 ~i~--~~~~~lv~-gD~~~~~~~l~~~l~~~ 126 (296)
T 1mc3_A 99 FLN--GEPSCLVL-GDNIFFGQGFSPKLRHV 126 (296)
T ss_dssp HHT--TSCEEEEE-TTEEEECSSCHHHHHHH
T ss_pred HhC--CCCEEEEE-CCccccccCHHHHHHHH
Confidence 761 24555555 88765334567777665
No 63
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=52.44 E-value=29 Score=32.98 Aligned_cols=58 Identities=14% Similarity=-0.039 Sum_probs=39.3
Q ss_pred CccEEEEEcCCCCCCChhHHHHHHHhcccCCCcEEEEEcCCCCCC-hHHHHHHHHHHhcCC
Q 041333 157 GINIKYEVRDNRKGYKAGALREGMKRGYVKSCDFVVIFDADFQPE-SDFLTRTIPFLVHNP 216 (513)
Q Consensus 157 ~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~~~d~I~~lDaD~~~~-pd~L~~l~~~~~~~~ 216 (513)
+.++.++..+...| -++++..+.+... ...|.++++.+|...+ +..+.+++..+.++.
T Consensus 104 g~~i~~~~~~~~~G-t~~al~~a~~~l~-~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~ 162 (323)
T 2pa4_A 104 LIKAVPVTQDKPLG-LGHAVGLAESVLD-DDEDVVAVMLPDDLVLPTGVMERMAQVRAEFG 162 (323)
T ss_dssp HCEEEEEECSSCCC-HHHHHHTTGGGSC-SSCCEEEEECTTEEEESSCHHHHHHHHHHTTC
T ss_pred CcceEEEeCCccCC-cHHHHHHHHHHhc-CCCCeEEEEeCCcccCchHHHHHHHHHHHhcC
Confidence 34566666555555 6777777776651 1235589999998886 688999988874433
No 64
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=52.18 E-value=28 Score=30.05 Aligned_cols=94 Identities=12% Similarity=0.151 Sum_probs=52.3
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccC
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVK 186 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~ 186 (513)
+....+..+++.+.+.. -++++| |.+.. ++..+...+ +.+ ....++.++..+ ..| ...++..|++..
T Consensus 25 ~g~pli~~~l~~l~~~~--~~~v~v-v~~~~-~~~i~~~~~---~~~-~~~~~~~~~~~~-~~g-~~~si~~al~~~--- 91 (196)
T 3rsb_A 25 CGRCLIDYVVSPLLKSK--VNNIFI-ATSPN-TPKTKEYIN---SAY-KDYKNIVVIDTS-GKG-YIEDLNECIGYF--- 91 (196)
T ss_dssp TTEEHHHHHHHHHHSSS--CCCEEE-ECCTT-CHHHHHHHH---HHT-TTTTEEEE----------CCCCCTTTTTC---
T ss_pred CCEEHHHHHHHHHHHCC--CCEEEE-EeCCC-hHHHHHHHH---hhc-cCCCCEEEEECC-CCC-cHHHHHHHHHhC---
Confidence 34468999999988765 234444 44332 333232322 112 111245444322 233 345555566554
Q ss_pred CCcEEEEEcCCC-CCChHHHHHHHHHHhc
Q 041333 187 SCDFVVIFDADF-QPESDFLTRTIPFLVH 214 (513)
Q Consensus 187 ~~d~I~~lDaD~-~~~pd~L~~l~~~~~~ 214 (513)
.|.++++++|. .++++.+++++..+.+
T Consensus 92 -~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 92 -SEPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp -SSCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred -CCCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 68899999997 5699999999998853
No 65
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=49.55 E-value=1.3e+02 Score=29.38 Aligned_cols=106 Identities=13% Similarity=0.030 Sum_probs=58.0
Q ss_pred CCcEEEEEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeC-CCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChh
Q 041333 96 YPMVLVQIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDD-STDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAG 174 (513)
Q Consensus 96 ~P~VsIiIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dd-s~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~ 174 (513)
.++++.+|-++++.+.+++.++++ ..|...+.| -+|. +++...+.+ +... ....++.+............
T Consensus 83 ~~kiAflil~h~d~~~l~rll~~l---y~p~n~y~I-HvD~ks~~~~~~~~-~~~~----~~f~NV~v~~~~~~v~WGg~ 153 (391)
T 2gak_A 83 GFPIAYSIVVHHKIEMLDRLLRAI---YMPQNFYCI-HVDRKAEESFLAAV-QGIA----SCFDNVFVASQLESVVYASW 153 (391)
T ss_dssp TSCEEEEEEECSCHHHHHHHHHHH---CCTTSEEEE-EECTTSCHHHHHHH-HHHH----HTCTTEEECSSCCCCCTTSH
T ss_pred CCCEEEEEEecCCHHHHHHHHHHH---hCCCCeEEE-EEeCCCCHHHHHHH-HHHH----hcCCCEEEeccCcccccCCc
Confidence 357999999999888888888776 235444445 4554 444322222 2111 12367777633322221112
Q ss_pred HH----HHHHHhccc--CCCcEEEEEcCCCCC--ChHHHHHHHH
Q 041333 175 AL----REGMKRGYV--KSCDFVVIFDADFQP--ESDFLTRTIP 210 (513)
Q Consensus 175 al----n~gl~~a~~--~~~d~I~~lDaD~~~--~pd~L~~l~~ 210 (513)
.+ -.+++.+.. .+-+|++.+-+++.| +.+.+.+.+.
T Consensus 154 S~v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~ 197 (391)
T 2gak_A 154 TRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLK 197 (391)
T ss_dssp HHHHHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHH
Confidence 22 223333322 278999988888877 4555555443
No 66
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=43.78 E-value=1.7e+02 Score=25.87 Aligned_cols=94 Identities=11% Similarity=0.008 Sum_probs=57.1
Q ss_pred EEEEEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHH
Q 041333 99 VLVQIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALRE 178 (513)
Q Consensus 99 VsIiIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~ 178 (513)
.-|.|-+-+....++..++++.+...+ .++..++.|. .|....+.++ +.+..+.+.... ..+..++..
T Consensus 9 ~ri~vl~SG~gsnl~all~~~~~~~~~-~~I~~Vis~~-~~a~~l~~A~-------~~gIp~~~~~~~---~~~~~~~~~ 76 (215)
T 3kcq_A 9 LRVGVLISGRGSNLEALAKAFSTEESS-VVISCVISNN-AEARGLLIAQ-------SYGIPTFVVKRK---PLDIEHIST 76 (215)
T ss_dssp EEEEEEESSCCHHHHHHHHHTCCC-CS-EEEEEEEESC-TTCTHHHHHH-------HTTCCEEECCBT---TBCHHHHHH
T ss_pred CEEEEEEECCcHHHHHHHHHHHcCCCC-cEEEEEEeCC-cchHHHHHHH-------HcCCCEEEeCcc---cCChHHHHH
Confidence 345555557778888899888665554 4565545543 3332221221 235665544221 223456667
Q ss_pred HHHhcccCCCcEEEEEcCCCCCChHHHHH
Q 041333 179 GMKRGYVKSCDFVVIFDADFQPESDFLTR 207 (513)
Q Consensus 179 gl~~a~~~~~d~I~~lDaD~~~~pd~L~~ 207 (513)
.++.. +.|+++...--.++++++++.
T Consensus 77 ~L~~~---~~Dlivlagy~~IL~~~~l~~ 102 (215)
T 3kcq_A 77 VLREH---DVDLVCLAGFMSILPEKFVTD 102 (215)
T ss_dssp HHHHT---TCSEEEESSCCSCCCHHHHHH
T ss_pred HHHHh---CCCEEEEeCCceEeCHHHHhh
Confidence 77777 899999998888889887766
No 67
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=40.81 E-value=1.3e+02 Score=27.64 Aligned_cols=99 Identities=6% Similarity=-0.071 Sum_probs=49.3
Q ss_pred EEEEEeccCCh--HHHHHHHHHHHcCCCCCCeeEEEEE-eCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCC--CCCh
Q 041333 99 VLVQIPMFNER--EVYQLSIGAACGLSWPSDRLIIQVL-DDSTDLTIKDMVELECQRWASKGINIKYEVRDNRK--GYKA 173 (513)
Q Consensus 99 VsIiIP~yne~--~~l~~~l~sl~~q~yp~~~i~IiV~-Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~--g~Ka 173 (513)
+.|++.+ |+. ..+..++.|+++..- +..+.++|. |+-+++..+. +++..+ ..+..+..+..+... +.+.
T Consensus 6 i~I~~~~-d~~Y~~~~~v~i~Sl~~~~~-~~~~~~~il~~~is~~~~~~-L~~~~~---~~~~~i~~~~~~~~~~~~~~~ 79 (276)
T 3tzt_A 6 DALLLTL-DENYIPQMKVLMTSIYINNP-GRIFDVYLIHSRISEDKLKD-LGEDLK---KFSYTLYPIRATDDLFSFAKV 79 (276)
T ss_dssp EEEEEEC-CGGGHHHHHHHHHHHHHHST-TCCEEEEEEESCCCHHHHHH-HHHHHH---TTTCEEEEEECC---------
T ss_pred EEEEEEe-CHhHHHHHHHHHHHHHHhCC-CCceEEEEEeCCCCHHHHHH-HHHHHH---HcCCEEEEEEeCHHHHhcCcc
Confidence 6677555 443 788889999986542 234555444 4444444443 333322 234556666443211 0000
Q ss_pred ---h-HHHHH---HHhcccCCCcEEEEEcCCCCCChH
Q 041333 174 ---G-ALREG---MKRGYVKSCDFVVIFDADFQPESD 203 (513)
Q Consensus 174 ---~-aln~g---l~~a~~~~~d~I~~lDaD~~~~pd 203 (513)
. -.+.. +......+.|-|+.+|+|.++..|
T Consensus 80 ~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~d 116 (276)
T 3tzt_A 80 TDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINP 116 (276)
T ss_dssp ----CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSC
T ss_pred ccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCC
Confidence 0 01110 000111257999999999887543
No 68
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=35.29 E-value=52 Score=29.15 Aligned_cols=43 Identities=9% Similarity=0.084 Sum_probs=31.2
Q ss_pred ChhHHHHHHHhcccCCCcEEEEEcCCC-CCChHHHHHHHHHHhc
Q 041333 172 KAGALREGMKRGYVKSCDFVVIFDADF-QPESDFLTRTIPFLVH 214 (513)
Q Consensus 172 Ka~aln~gl~~a~~~~~d~I~~lDaD~-~~~pd~L~~l~~~~~~ 214 (513)
...++..|++.+.....|+++++++|. .++++.+.+++..+.+
T Consensus 91 ~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~ 134 (234)
T 1vpa_A 91 RSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARE 134 (234)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHh
Confidence 345577777765210368999999998 5699999999987743
No 69
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=35.00 E-value=2.3e+02 Score=24.86 Aligned_cols=95 Identities=16% Similarity=0.107 Sum_probs=55.5
Q ss_pred EEEEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCCh---hHH
Q 041333 100 LVQIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKA---GAL 176 (513)
Q Consensus 100 sIiIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka---~al 176 (513)
-|.|-+-+....++..++++.+...+ .++..+|.|. .|....+.++ +.+..+.+....+-.. |. ..+
T Consensus 9 ri~vl~SG~gsnl~all~~~~~~~l~-~~I~~Visn~-~~a~~l~~A~-------~~gIp~~~~~~~~~~~-r~~~d~~~ 78 (209)
T 4ds3_A 9 RVVIFISGGGSNMEALIRAAQAPGFP-AEIVAVFSDK-AEAGGLAKAE-------AAGIATQVFKRKDFAS-KEAHEDAI 78 (209)
T ss_dssp EEEEEESSCCHHHHHHHHHHTSTTCS-EEEEEEEESC-TTCTHHHHHH-------HTTCCEEECCGGGSSS-HHHHHHHH
T ss_pred cEEEEEECCcHHHHHHHHHHHcCCCC-cEEEEEEECC-cccHHHHHHH-------HcCCCEEEeCccccCC-HHHHHHHH
Confidence 35555567778899999988765554 4565545543 3332221222 2366665543221111 21 344
Q ss_pred HHHHHhcccCCCcEEEEEcCCCCCChHHHHH
Q 041333 177 REGMKRGYVKSCDFVVIFDADFQPESDFLTR 207 (513)
Q Consensus 177 n~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~ 207 (513)
-..++.. +.|+++...=-.++++++++.
T Consensus 79 ~~~l~~~---~~Dliv~agy~~il~~~~l~~ 106 (209)
T 4ds3_A 79 LAALDVL---KPDIICLAGYMRLLSGRFIAP 106 (209)
T ss_dssp HHHHHHH---CCSEEEESSCCSCCCHHHHGG
T ss_pred HHHHHhc---CCCEEEEeccccCcCHHHHhh
Confidence 4556666 889999988888888887665
No 70
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=33.98 E-value=1.5e+02 Score=26.66 Aligned_cols=45 Identities=13% Similarity=0.271 Sum_probs=34.6
Q ss_pred CCCCChhHHHHHHHhcccCCCcEEEEEcCCC-CCChHHHHHHHHHH
Q 041333 168 RKGYKAGALREGMKRGYVKSCDFVVIFDADF-QPESDFLTRTIPFL 212 (513)
Q Consensus 168 ~~g~Ka~aln~gl~~a~~~~~d~I~~lDaD~-~~~pd~L~~l~~~~ 212 (513)
..++-...++.|++.+....++-++++-+|+ .++++.|.++...+
T Consensus 83 ~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l 128 (242)
T 3cgx_A 83 QGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDL 128 (242)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHh
Confidence 4445778888888875333567899999996 55899999998877
No 71
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=30.49 E-value=1.3e+02 Score=28.55 Aligned_cols=18 Identities=22% Similarity=0.182 Sum_probs=14.6
Q ss_pred CCCcEEEEEcCCCCCChH
Q 041333 186 KSCDFVVIFDADFQPESD 203 (513)
Q Consensus 186 ~~~d~I~~lDaD~~~~pd 203 (513)
.+.|-|+.+|+|+++-.|
T Consensus 93 ~~ydrvlYLDaD~lv~~d 110 (333)
T 1ll2_A 93 TQYSKCVFMDADTLVLAN 110 (333)
T ss_dssp TTCSEEEEECTTEEECSC
T ss_pred cCCCeEEEEeCCEEeccC
Confidence 378999999999887543
No 72
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=29.36 E-value=1.2e+02 Score=28.55 Aligned_cols=86 Identities=9% Similarity=0.051 Sum_probs=43.1
Q ss_pred HHHHHHHHHH-HcCCCCCCeeEEE-EEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCC--------CCC-ChhH--H
Q 041333 110 EVYQLSIGAA-CGLSWPSDRLIIQ-VLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNR--------KGY-KAGA--L 176 (513)
Q Consensus 110 ~~l~~~l~sl-~~q~yp~~~i~Ii-V~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~--------~g~-Ka~a--l 176 (513)
..+..++.|+ +... + ..+.++ +.|+-+++..+.+ ++..+ ..+..+..+..+.. .+. ...+ +
T Consensus 13 ~~~~vli~Sl~l~~~-~-~~~~f~il~~~ls~~~~~~L-~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~s~~~y~R 86 (311)
T 1g9r_A 13 AYLCVAAKSVEAAHP-D-TEIRFHVLDAGISEANRAAV-AANLR---GGGGNIRFIDVNPEDFAGFPLNIRHISITTYAR 86 (311)
T ss_dssp HHHHHHHHHHHHTCT-T-SCCEEEEEESSCCHHHHHHH-HHHSG---GGTTTEEEEECCGGGGTTSCCCCTTCCGGGGGG
T ss_pred HHHHHHHHHHHHHcC-C-CCceEEEEECCCCHHHHHHH-HHHHH---HcCCEEEEEEcCHHHHhcCccccccCCHHHHHH
Confidence 6788899999 6543 2 234443 4444444444433 32222 22556666543211 110 0001 1
Q ss_pred HHHHHhcccCCCcEEEEEcCCCCCChH
Q 041333 177 REGMKRGYVKSCDFVVIFDADFQPESD 203 (513)
Q Consensus 177 n~gl~~a~~~~~d~I~~lDaD~~~~pd 203 (513)
-..-+.. ++.|-|+.+|+|.++-.|
T Consensus 87 l~l~~ll--~~~~kvlyLD~D~iv~~d 111 (311)
T 1g9r_A 87 LKLGEYI--ADCDKVLYLDIDVLVRDS 111 (311)
T ss_dssp GGHHHHC--CSCSCEEEECSSEEECSC
T ss_pred HHHHHHh--hhcCEEEEEcCCeEeccC
Confidence 1111111 367999999999888654
No 73
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=25.96 E-value=1.2e+02 Score=28.78 Aligned_cols=95 Identities=13% Similarity=0.133 Sum_probs=51.4
Q ss_pred EEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHH
Q 041333 102 QIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMK 181 (513)
Q Consensus 102 iIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~ 181 (513)
++|..++...+..+++.+.+..- -.++.| |.+... .+.+.+ .+.+ .....++..+...| -+.++..+..
T Consensus 27 ll~l~g~~pli~~~l~~l~~~~~-~~~iiv-vt~~~~---~~~i~~----~l~~-~~~~~ii~e~~~~g-ta~ai~~a~~ 95 (336)
T 2x65_A 27 FLKLFGNKSLMRWTFERVLEEMD-PKDVIV-VTHKDY---VERTKK----ELPE-LPDENIIAEPMKKN-TAPACFIGTK 95 (336)
T ss_dssp GCCCBTTBCHHHHHHHHHHTTCC-GGGEEE-EEEGGG---HHHHHH----HCTT-SCGGGEEEESSCCC-HHHHHHHHHT
T ss_pred EEECCCCCcHHHHHHHHHhccCC-CCcEEE-EcChHH---HHHHHH----Hhhc-cccceEEeCCCCCC-cHHHHHHHHH
Confidence 35666656789999999887521 134544 444321 121221 1111 11122344554455 5677766665
Q ss_pred hcccCCCcEEEEEcCCCCC-ChHHHHHHH
Q 041333 182 RGYVKSCDFVVIFDADFQP-ESDFLTRTI 209 (513)
Q Consensus 182 ~a~~~~~d~I~~lDaD~~~-~pd~L~~l~ 209 (513)
.. ...+.++++.+|... +++.+.+++
T Consensus 96 ~~--~~~~~~lvl~~D~~~~~~~~~~~~l 122 (336)
T 2x65_A 96 LA--DDDEPVLVLPADHRIPDTKKFWKTV 122 (336)
T ss_dssp TS--CTTCEEEEEETTCBCCCHHHHHHHH
T ss_pred hh--CCCCEEEEEcCCceeccHHHHHHHH
Confidence 43 135789999999876 455544433
No 74
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=25.39 E-value=2.1e+02 Score=25.15 Aligned_cols=77 Identities=12% Similarity=0.143 Sum_probs=50.0
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccC
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVK 186 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~ 186 (513)
+....++.+++.+.+... +++| |.++ + . +. ++ .++.+ +...| -++++..|++..
T Consensus 30 ~g~pll~~~l~~l~~~~~---~ivv-v~~~--~-~---i~-----~~----~~~~~---~~~~g-~~~~i~~a~~~~--- 83 (232)
T 2dpw_A 30 RGRPMVEWVLEALYAAGL---SPVY-VGEN--P-G---LV-----PA----PALTL---PDRGG-LLENLEQALEHV--- 83 (232)
T ss_dssp TTEETHHHHHHHHHHTTC---EEEE-ESCC--S-S---CS-----SC----CSEEE---CCCSS-HHHHHHHHHHTC---
T ss_pred CCEEHHHHHHHHHHhcCC---EEEE-EeCh--H-H---Hh-----hh----cCeEe---cCCCC-HHHHHHHHHHHc---
Confidence 345678888888877642 4333 3222 2 1 11 11 13444 33344 678888998887
Q ss_pred CCcEEEEEcCCCC-CChHHHHHHHH
Q 041333 187 SCDFVVIFDADFQ-PESDFLTRTIP 210 (513)
Q Consensus 187 ~~d~I~~lDaD~~-~~pd~L~~l~~ 210 (513)
+ |.++++++|.- ++++.+++++.
T Consensus 84 ~-~~~lv~~~D~P~~~~~~i~~l~~ 107 (232)
T 2dpw_A 84 E-GRVLVATGDIPHLTEEAVRFVLD 107 (232)
T ss_dssp C-SEEEEEETTCTTCCHHHHHHHHH
T ss_pred C-CCEEEEeCCcccCCHHHHHHHHh
Confidence 6 89999999985 58999999988
No 75
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=22.48 E-value=3.4e+02 Score=26.62 Aligned_cols=105 Identities=8% Similarity=0.052 Sum_probs=54.3
Q ss_pred EEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHh--h-c---cCccEEEEEcCC---C---C
Q 041333 102 QIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRW--A-S---KGINIKYEVRDN---R---K 169 (513)
Q Consensus 102 iIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~--~-~---~~~~v~~~~~~~---~---~ 169 (513)
++|.-+....++.+++.+.+... .++.| |.....+ ......+ +.+ . . ....+.++...+ + .
T Consensus 45 llpi~g~~pli~~~l~~l~~~g~--~~i~v-v~~~~~~-~i~~~~~---~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~ 117 (451)
T 1yp2_A 45 AVPLGANYRLIDIPVSNCLNSNI--SKIYV-LTQFNSA-SLNRHLS---RAYASNMGGYKNEGFVEVLAAQQSPENPDWF 117 (451)
T ss_dssp GCEETTTEETTHHHHHHHHHTTC--CEEEE-EESCCCH-HHHHHHH---HHCC--------CCEEEEEESCSSTTSCCCC
T ss_pred eeEECCcceeHHHHHHHHHHCCC--CEEEE-EeccCHH-HHHHHHh---hhhhcccccccccCcEEEecccccccccccc
Confidence 34555654677888888877642 34444 4443322 2222221 111 0 0 011233442111 1 1
Q ss_pred CCChhHHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhc
Q 041333 170 GYKAGALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVH 214 (513)
Q Consensus 170 g~Ka~aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~ 214 (513)
.+-++++..+++.......|.++++.+|...+.+ +.+++..+.+
T Consensus 118 ~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~-l~~l~~~~~~ 161 (451)
T 1yp2_A 118 QGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMD-YEKFIQAHRE 161 (451)
T ss_dssp CSHHHHHHHTHHHHTTSCCSEEEEECSCEECCCC-HHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHhcCCCeEEEecCcEEEcCC-HHHHHHHHHH
Confidence 2356778777776621125899999999866654 6777776633
No 76
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=22.21 E-value=4e+02 Score=23.30 Aligned_cols=94 Identities=12% Similarity=0.098 Sum_probs=53.4
Q ss_pred EEEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCC---hhHHH
Q 041333 101 VQIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYK---AGALR 177 (513)
Q Consensus 101 IiIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K---a~aln 177 (513)
|.|-..+..+....+++++.+...+ .++..+|.| ..|....+.+ + +.+..+.++...+-.. + ...+.
T Consensus 6 i~vl~sG~g~~~~~~l~~l~~~~l~-~~I~~Vit~-~~~~~v~~~A----~---~~gIp~~~~~~~~~~~-~~~~~~~~~ 75 (212)
T 3av3_A 6 LAVFASGSGTNFQAIVDAAKRGDLP-ARVALLVCD-RPGAKVIERA----A---RENVPAFVFSPKDYPS-KAAFESEIL 75 (212)
T ss_dssp EEEECCSSCHHHHHHHHHHHTTCCC-EEEEEEEES-STTCHHHHHH----H---HTTCCEEECCGGGSSS-HHHHHHHHH
T ss_pred EEEEEECCcHHHHHHHHHHHhCCCC-CeEEEEEeC-CCCcHHHHHH----H---HcCCCEEEeCcccccc-hhhhHHHHH
Confidence 4555567777888999988876433 455554544 3333322222 2 2356655443221111 2 12344
Q ss_pred HHHHhcccCCCcEEEEEcCCCCCChHHHHH
Q 041333 178 EGMKRGYVKSCDFVVIFDADFQPESDFLTR 207 (513)
Q Consensus 178 ~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~ 207 (513)
..++.. +.|+++..-=--++++++++.
T Consensus 76 ~~l~~~---~~Dliv~a~y~~il~~~~l~~ 102 (212)
T 3av3_A 76 RELKGR---QIDWIALAGYMRLIGPTLLSA 102 (212)
T ss_dssp HHHHHT---TCCEEEESSCCSCCCHHHHHH
T ss_pred HHHHhc---CCCEEEEchhhhhCCHHHHhh
Confidence 455555 889998887777888887765
No 77
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=21.25 E-value=4.2e+02 Score=23.24 Aligned_cols=92 Identities=14% Similarity=0.055 Sum_probs=53.6
Q ss_pred EeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCCh---hHHHHH
Q 041333 103 IPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKA---GALREG 179 (513)
Q Consensus 103 IP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka---~aln~g 179 (513)
|=+-+....++..+++..+-+.+ .++..+|.|. .|....+.++ +.+..+.+....+-.. |. ..+...
T Consensus 7 vl~Sg~Gsnl~ali~~~~~~~l~-~eI~~Visn~-~~a~v~~~A~-------~~gIp~~~~~~~~~~~-r~~~d~~~~~~ 76 (211)
T 3p9x_A 7 IFASGSGTNAEAIIQSQKAGQLP-CEVALLITDK-PGAKVVERVK-------VHEIPVCALDPKTYPS-KEAYEIEVVQQ 76 (211)
T ss_dssp EECCTTCHHHHHHHHHHHTTCCS-SEEEEEEESC-SSSHHHHHHH-------TTTCCEEECCGGGSSS-HHHHHHHHHHH
T ss_pred EEEeCCchHHHHHHHHHHcCCCC-cEEEEEEECC-CCcHHHHHHH-------HcCCCEEEeChhhcCc-hhhhHHHHHHH
Confidence 33344567788888887766655 4666655554 3333222222 3466665443221111 21 244555
Q ss_pred HHhcccCCCcEEEEEcCCCCCChHHHHH
Q 041333 180 MKRGYVKSCDFVVIFDADFQPESDFLTR 207 (513)
Q Consensus 180 l~~a~~~~~d~I~~lDaD~~~~pd~L~~ 207 (513)
++.. +.|+++..--.-++++++++.
T Consensus 77 l~~~---~~Dliv~agy~~Il~~~~l~~ 101 (211)
T 3p9x_A 77 LKEK---QIDFVVLAGYMRLVGPTLLGA 101 (211)
T ss_dssp HHHT---TCCEEEESSCCSCCCHHHHHH
T ss_pred HHhc---CCCEEEEeCchhhcCHHHHhh
Confidence 6666 899999988888888887766
No 78
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=20.77 E-value=1.7e+02 Score=28.64 Aligned_cols=103 Identities=11% Similarity=0.147 Sum_probs=54.1
Q ss_pred EeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhc----cCccEEEEEcCC----C---CCC
Q 041333 103 IPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWAS----KGINIKYEVRDN----R---KGY 171 (513)
Q Consensus 103 IP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~----~~~~v~~~~~~~----~---~g~ 171 (513)
+|.-+....+..+++.+.+.. -+++.| |.+... +..+...+ +.|.. ....+.++.... . .|
T Consensus 38 lpi~gk~pli~~~l~~l~~~g--i~~i~v-v~~~~~-~~i~~~~~---~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~G- 109 (420)
T 3brk_X 38 VYFGGKARIIDFALSNALNSG--IRRIGV-ATQYKA-HSLIRHLQ---RGWDFFRPERNESFDILPASQRVSETQWYEG- 109 (420)
T ss_dssp SEETTTEETHHHHHHHHHHTT--CCEEEE-EECTTC-HHHHHHHH---HHSCCCCGGGTCEEEEECCC-------CCCC-
T ss_pred cccCCCCcHHHHHHHHHHhCC--CCeEEE-EeCCCh-HHHHHHHh---hhhccccccccCCEEEeCccccccCCccccC-
Confidence 455555367888898888764 234444 444332 22222222 11210 011244442211 2 33
Q ss_pred ChhHHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhc
Q 041333 172 KAGALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVH 214 (513)
Q Consensus 172 Ka~aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~ 214 (513)
-++++..+++.......|.++++.+|...+.+ +.+++..+.+
T Consensus 110 t~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~-l~~l~~~~~~ 151 (420)
T 3brk_X 110 TADAVYQNIDIIEPYAPEYMVILAGDHIYKMD-YEYMLQQHVD 151 (420)
T ss_dssp HHHHHHTTHHHHHHHCCSEEEEEESSCEECBC-THHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEecccEEEchH-HHHHHHHHHH
Confidence 56777777766511124889999999965554 6777776633
No 79
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=20.62 E-value=4.3e+02 Score=23.12 Aligned_cols=94 Identities=13% Similarity=0.082 Sum_probs=52.7
Q ss_pred EEEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCCh---hHHH
Q 041333 101 VQIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKA---GALR 177 (513)
Q Consensus 101 IiIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka---~aln 177 (513)
|++-+-+..+....+++++.+..++ .++..+|.+ .+|....+.+ + +.+..+.++...+-.. +. ..+.
T Consensus 4 I~vl~SG~g~~~~~~l~~l~~~~~~-~~i~~Vvs~-~~~~~~~~~A----~---~~gIp~~~~~~~~~~~-r~~~~~~~~ 73 (216)
T 2ywr_A 4 IGVLVSGRGSNLQAIIDAIESGKVN-ASIELVISD-NPKAYAIERC----K---KHNVECKVIQRKEFPS-KKEFEERMA 73 (216)
T ss_dssp EEEEECSCCHHHHHHHHHHHTTSSC-EEEEEEEES-CTTCHHHHHH----H---HHTCCEEECCGGGSSS-HHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCC-CeEEEEEeC-CCChHHHHHH----H---HcCCCEEEeCcccccc-hhhhhHHHH
Confidence 4444456677888999998876553 345443444 3333322222 2 2356655443221111 11 2344
Q ss_pred HHHHhcccCCCcEEEEEcCCCCCChHHHHH
Q 041333 178 EGMKRGYVKSCDFVVIFDADFQPESDFLTR 207 (513)
Q Consensus 178 ~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~ 207 (513)
..++.. +.|+++...-.-+++++.++.
T Consensus 74 ~~l~~~---~~Dliv~a~y~~il~~~~l~~ 100 (216)
T 2ywr_A 74 LELKKK---GVELVVLAGFMRILSHNFLKY 100 (216)
T ss_dssp HHHHHT---TCCEEEESSCCSCCCHHHHTT
T ss_pred HHHHhc---CCCEEEEeCchhhCCHHHHhh
Confidence 455555 889999888888888876644
No 80
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=20.08 E-value=1.9e+02 Score=26.41 Aligned_cols=17 Identities=24% Similarity=0.190 Sum_probs=14.3
Q ss_pred CCcEEEEEcCCCCCChH
Q 041333 187 SCDFVVIFDADFQPESD 203 (513)
Q Consensus 187 ~~d~I~~lDaD~~~~pd 203 (513)
+.|-|+.+|+|+.+-.+
T Consensus 95 ~~~~vlylD~D~~v~~~ 111 (263)
T 3u2u_A 95 QYSKCVFMDADTLVLAN 111 (263)
T ss_dssp TCSEEEEECTTEEECSC
T ss_pred CcceEEEEcCCEeeccC
Confidence 78999999999887543
Done!