Query 041333
Match_columns 513
No_of_seqs 454 out of 3943
Neff 9.1
Searched_HMMs 13730
Date Mon Mar 25 09:56:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041333.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/041333hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xhba2 c.68.1.17 (A:95-422) P 100.0 3.1E-29 2.3E-33 247.9 20.2 214 93-314 18-251 (328)
2 d1qg8a_ c.68.1.1 (A:) Spore co 99.9 3.8E-24 2.8E-28 203.1 15.5 203 97-318 1-219 (255)
3 d1omza_ c.68.1.15 (A:) Alpha-1 99.8 5.2E-21 3.8E-25 179.3 8.2 185 96-299 2-194 (265)
4 d2bo4a1 c.68.1.18 (A:2-382) Ma 99.4 8.2E-12 6E-16 121.8 18.9 196 101-310 3-212 (381)
5 d1pzta_ c.68.1.2 (A:) beta 1,4 98.0 1.9E-06 1.4E-10 79.3 4.7 180 96-337 48-247 (271)
6 d1fo8a_ c.68.1.10 (A:) N-acety 97.9 2.9E-05 2.1E-09 73.2 10.4 182 98-308 3-205 (343)
7 d1v82a_ c.68.1.7 (A:) Beta-1,3 91.3 0.36 2.6E-05 42.2 8.8 102 96-208 1-126 (252)
8 d3cu0a1 c.68.1.7 (A:75-335) 1, 89.1 1.3 9.8E-05 38.5 10.5 99 99-208 3-133 (261)
9 d1g97a2 c.68.1.5 (A:2-251) N-a 87.0 2.4 0.00018 36.1 11.3 95 107-216 27-121 (250)
10 d1qwja_ c.68.1.13 (A:) CMP acy 85.1 6 0.00044 33.1 12.9 109 97-222 2-129 (228)
11 d1fxoa_ c.68.1.6 (A:) RmlA (Rf 78.4 3.1 0.00023 37.1 8.4 102 102-215 26-127 (292)
12 d1eyra_ c.68.1.13 (A:) CMP acy 77.2 2.5 0.00018 35.6 7.1 93 107-214 27-124 (225)
13 d1h7ea_ c.68.1.13 (A:) CMP:2-k 73.6 23 0.0017 29.5 14.5 183 107-307 25-216 (245)
14 d1mc3a_ c.68.1.6 (A:) RffH {Es 70.2 3.3 0.00024 36.9 6.2 191 102-313 26-223 (291)
15 d1lvwa_ c.68.1.6 (A:) RmlA (Rf 69.0 8.1 0.00059 34.1 8.8 99 103-212 29-127 (295)
16 d1w55a1 c.68.1.13 (A:3-207) Is 61.3 29 0.0021 28.5 10.4 156 107-309 27-184 (205)
17 d2oi6a2 c.68.1.5 (A:4-251) N-a 60.8 42 0.003 27.6 12.0 94 103-212 25-118 (248)
18 d1vgwa_ c.68.1.13 (A:) 4-dipho 55.3 25 0.0018 29.1 9.1 103 107-220 29-134 (226)
19 d1vpaa_ c.68.1.13 (A:) 4-dipho 51.2 11 0.00083 31.3 6.0 99 103-215 26-125 (221)
20 d1w77a1 c.68.1.13 (A:75-300) 4 50.3 25 0.0018 29.1 8.3 94 107-215 30-126 (226)
21 d1e5ka_ c.68.1.8 (A:) Molybden 47.0 37 0.0027 26.7 8.6 37 173-212 77-114 (188)
22 d1ga8a_ c.68.1.4 (A:) Galactos 44.2 20 0.0015 30.9 6.8 96 101-203 3-111 (282)
23 d2cu2a2 c.68.1.20 (A:1-268) Pu 43.5 14 0.001 32.0 5.5 89 102-204 28-116 (268)
24 d1vh1a_ c.68.1.13 (A:) CMP:2-k 43.5 81 0.0059 25.8 17.0 94 108-216 25-119 (246)
25 d1vica_ c.68.1.13 (A:) CMP:2-k 43.0 83 0.006 25.8 12.6 93 108-215 25-118 (255)
26 d1ll2a_ c.68.1.14 (A:) Glycoge 41.3 43 0.0031 28.2 8.5 18 186-203 93-110 (263)
27 d1i52a_ c.68.1.13 (A:) 4-dipho 41.2 83 0.006 25.3 10.3 103 102-220 25-128 (225)
28 d2dpwa1 c.68.1.19 (A:1-231) Un 32.1 50 0.0036 27.0 7.2 37 172-212 72-109 (231)
29 d1yp2a2 c.68.1.6 (A:10-316) Gl 26.5 1.6E+02 0.011 24.7 10.0 117 102-221 36-160 (307)
No 1
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.96 E-value=3.1e-29 Score=247.93 Aligned_cols=214 Identities=15% Similarity=0.110 Sum_probs=153.0
Q ss_pred CCCCCcEEEEEeccCCh-HHHHHHHHHHHcCCCCCCeeEEE-EEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCC
Q 041333 93 NSSYPMVLVQIPMFNER-EVYQLSIGAACGLSWPSDRLIIQ-VLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKG 170 (513)
Q Consensus 93 ~~~~P~VsIiIP~yne~-~~l~~~l~sl~~q~yp~~~i~Ii-V~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g 170 (513)
+++.|.||||||+|||. +.|.+||+|+++|+||+...+|+ |+|+|+|++.+...++..++ ...++++++.+++.|
T Consensus 18 ~~~~P~vSIIIp~yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~~~~~---~~~~i~vi~~~~n~G 94 (328)
T d1xhba2 18 PDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKK---LKVPVHVIRMEQRSG 94 (328)
T ss_dssp CSCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHS---SSSCEEEEECSSCCC
T ss_pred CCCCCCEEEEEeccCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHHHHHHh---cCCCeEEEEeccccc
Confidence 46789999999999986 68999999999999987633333 55668898876555544332 356788888887777
Q ss_pred CChhHHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCch------HH--HHH-Hh
Q 041333 171 YKAGALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFVNADECL------MT--RLQ-EM 241 (513)
Q Consensus 171 ~Ka~aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~------~~--~~~-~~ 241 (513)
.++|+|.|++.| +||||+++|+|+.++|++|++++..+++++.. +|++.....+.+..- .. ... ..
T Consensus 95 -~~~a~N~Gi~~a---~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~-~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 169 (328)
T d1xhba2 95 -LIRARLKGAAVS---RGQVITFLDAHCECTAGWLEPLLARIKHDRRT-VVCPIIDVISDDTFEYMAGSDMTYGGFNWKL 169 (328)
T ss_dssp -HHHHHHHHHHHC---CSSEEEEEESSEEECTTCHHHHHHHHHHCTTE-EEEEEEEEECSSSCCEECCCTTEEEEECTTC
T ss_pred -chHHHHHHHHhh---hcceeeecCcccccChhHHHHHHHHHhcCCCe-EEecceeeeccCceeeccCCccccccccccc
Confidence 899999999999 99999999999999999999999999666554 455544333221100 00 000 00
Q ss_pred hhc--chhhH--Hhhhc--ccCCCccccccceeeeeHHHHHHcCCCCCCC---ccchHHHHHHHhhCCCeEEEecccccc
Q 041333 242 SLD--YHFTV--EQEVG--SSTHAFFGFNGTAGVWRIAAVNEAGGWKDRT---TVEDMDLAVRASLKGWKFLYLGTVKVK 312 (513)
Q Consensus 242 ~~~--~~~~~--~~~~~--~~~~~~~~~~G~~~~~rr~~l~~~gg~~~~~---~~ED~~l~~rl~~~G~~i~~~~~~~~~ 312 (513)
... ..... ..... ........++|+++++||++++++|||++.. .+||.|+++|+.++|+++.+.|++.++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G~~i~~~p~~~v~ 249 (328)
T d1xhba2 170 NFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVG 249 (328)
T ss_dssp CEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEE
T ss_pred cccccccchhhhhccccccccccccceecceeeeeeHHHHHHhCCCCCCCcCcCchHHHHHHHHHHhCCeEEEeCCeEEE
Confidence 000 00000 00001 1111223367999999999999999999975 369999999999999999999998887
Q ss_pred cc
Q 041333 313 NE 314 (513)
Q Consensus 313 ~~ 314 (513)
|.
T Consensus 250 H~ 251 (328)
T d1xhba2 250 HV 251 (328)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 2
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}
Probab=99.91 E-value=3.8e-24 Score=203.09 Aligned_cols=203 Identities=14% Similarity=0.137 Sum_probs=144.6
Q ss_pred CcEEEEEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCC-------CC
Q 041333 97 PMVLVQIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDN-------RK 169 (513)
Q Consensus 97 P~VsIiIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~-------~~ 169 (513)
|+|||+||+||+++.+++||+|+++|+|++.+++| |+|+|+|+|.+.+ + ++ .++.+++++..+. .+
T Consensus 1 P~vSiiip~yN~~~~l~~~l~Si~~Qt~~~~eiiv-vdd~S~d~t~~~l-~----~~-~~~~~i~~~~~~~~~~~~~~~~ 73 (255)
T d1qg8a_ 1 PKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFI-MDDNSNEETLNVI-R----PF-LNDNRVRFYQSDISGVKERTEK 73 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEE-EECSCCHHHHHHH-G----GG-GGSTTEEEEECCCCSHHHHHSS
T ss_pred CEEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEE-EECCCCccHHHHH-H----Hh-hhhccccccccccccccccccc
Confidence 78999999999999999999999999999876544 7777999998854 3 23 2346788876542 23
Q ss_pred CCChhHHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHHHHHHhhhcchhhH
Q 041333 170 GYKAGALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMTRLQEMSLDYHFTV 249 (513)
Q Consensus 170 g~Ka~aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 249 (513)
.|+++|+|.|++.| +||||+++|+|+.++|++|++++..++.+|++++|.+.....+.+.+.. ........
T Consensus 74 ~g~~~a~N~gi~~a---~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~~~- 144 (255)
T d1qg8a_ 74 TRYAALINQAIEMA---EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRD-----IVKETVRP- 144 (255)
T ss_dssp CHHHHHHHHHHHHC---CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---C-----EEEEEEEC-
T ss_pred chhccccccccccc---ccccccccccccccccchHHHHHHHHHhCCCCCeEeecceeeeeCCCCc-----Eeeeeccc-
Confidence 45899999999999 9999999999999999999999999988999999988766544332210 00000000
Q ss_pred HhhhcccCCCccccccceeeeeHHHHHHcC----CCCCCC----ccchHHHHHHHhhCCCeEEEecccccc-cccCcC
Q 041333 250 EQEVGSSTHAFFGFNGTAGVWRIAAVNEAG----GWKDRT----TVEDMDLAVRASLKGWKFLYLGTVKVK-NELPST 318 (513)
Q Consensus 250 ~~~~~~~~~~~~~~~G~~~~~rr~~l~~~g----g~~~~~----~~ED~~l~~rl~~~G~~i~~~~~~~~~-~~~p~~ 318 (513)
...........+.+++.++||+++++++ ++.++. ..||+|++.|+.+ ++++.+.++.... ...+.+
T Consensus 145 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~dl~lrl~~-~~~~~~i~~~l~~~~~~~~s 219 (255)
T d1qg8a_ 145 --AAQVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH-FYPFYPLDEELDLNYITDQS 219 (255)
T ss_dssp --CCSCBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-TCCBEEEEEEEEEEEEC---
T ss_pred --chhhhhhhcccccchhHHHHHHHHHHHHHhhCCCccccchhcchhhHHHHHHHHc-CCCEEEecCCEEEEEEcCCc
Confidence 0111122223356778899999998763 444322 5799999999975 6688888876553 333443
No 3
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=5.2e-21 Score=179.31 Aligned_cols=185 Identities=8% Similarity=0.027 Sum_probs=124.2
Q ss_pred CCcEEEEEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhH
Q 041333 96 YPMVLVQIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGA 175 (513)
Q Consensus 96 ~P~VsIiIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~a 175 (513)
+.++||+||+||+++.|++||+|+++|+|++ + +|+|+|||+|++.+.+.+ .+.+ .+..++..+++.| +++|
T Consensus 2 ~~~~tvii~tyn~~~~l~~~l~sl~~q~~~~-~-~iiV~d~~sd~~~~~i~~----~~~~--~~~~~~~~~~~~g-~~~a 72 (265)
T d1omza_ 2 LDSFTLIMQTYNRTDLLLRLLNHYQAVPSLH-K-VIVVWNNVGEKGPEELWN----SLGP--HPIPVIFKPQTAN-KMRN 72 (265)
T ss_dssp TTCEEEEEEESSCHHHHHHHHHHHTTSTTEE-E-EEEEECCTTCCCTHHHHH----HTCC--CSSCEEEEECSSC-CGGG
T ss_pred CCcEEEEEEcCCCHHHHHHHHHHHHcCCCcC-e-EEEEECCCCCccHHHHHH----Hhcc--cceEEEEecCCCC-chhh
Confidence 3479999999999999999999999999996 4 355888899888886654 2222 2223333344555 8999
Q ss_pred HHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHHHHHHhhhcchhhHHhhhcc
Q 041333 176 LREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMTRLQEMSLDYHFTVEQEVGS 255 (513)
Q Consensus 176 ln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (513)
+|.|++.| +||||+++|+|+.++|++|+++++.++++|+..+++........+... .. ............
T Consensus 73 ~n~~~~~a---~ge~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~ 142 (265)
T d1omza_ 73 RLQVFPEV---ETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIGFVPRKHVSTSSGI-YS------YGGFELQTPGPG 142 (265)
T ss_dssp GGSCCTTC---CSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEESCEEEEEEEETTE-EE------EECTTSCCCSSS
T ss_pred hhhhHHhC---CcCEEEEeCcccCCCHHHHHHHHHHHHhCCCcceecccccccccCCcc-cc------cccccccccccc
Confidence 99999999 999999999999999999999999997777766555544332211110 00 000000000111
Q ss_pred cCCCccccccceeeeeHHHHHHcCCCCCC--------CccchHHHHHHHhhC
Q 041333 256 STHAFFGFNGTAGVWRIAAVNEAGGWKDR--------TTVEDMDLAVRASLK 299 (513)
Q Consensus 256 ~~~~~~~~~G~~~~~rr~~l~~~gg~~~~--------~~~ED~~l~~rl~~~ 299 (513)
.........|++.++||+.++..+.+... ...+|.+........
T Consensus 143 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 194 (265)
T d1omza_ 143 NGDQYSMVLIGASFFNSKYLELFQKQPAAVHALIDETQNCDDIAMNFLVTRH 194 (265)
T ss_dssp SSCCBSEECTTEEEEETHHHHHHHTSCHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred cccccceeccceeEecHHHHHHHhhhHHHHhhhhhhhcchHHHHHHHHHHHh
Confidence 11122224588889999999877655432 256777776666543
No 4
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}
Probab=99.38 E-value=8.2e-12 Score=121.78 Aligned_cols=196 Identities=14% Similarity=0.079 Sum_probs=116.3
Q ss_pred EEEeccCCh-HHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCC---CCCCChh--
Q 041333 101 VQIPMFNER-EVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDN---RKGYKAG-- 174 (513)
Q Consensus 101 IiIP~yne~-~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~---~~g~Ka~-- 174 (513)
||||+|||+ +.+..+++.+.+. |..++ |+|+|||+|+|...+.+...+.-...+..+....+++ .+.||..
T Consensus 3 VVIP~~NEe~~il~~~v~~~a~~--P~~~e-IvVvDdsSdDtt~~i~~~~~~~~~~~~~~v~~~~~~~l~~~~~GKG~g~ 79 (381)
T d2bo4a1 3 VVFPFKHEHPEVLLHNVRVAAAH--PRVHE-VLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGM 79 (381)
T ss_dssp EEEECCSSCHHHHHHHHHHHHHS--TTCCE-EEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHH
T ss_pred EEEEcCCCcHHHHHHHHHHHHhC--CCeeE-EEEEcCCCCCcHHHHHHHhhhhhccccccchhhhhcccccccCCCcHHH
Confidence 899999998 6777777654443 44444 4478888888877665544333222333443332221 1223654
Q ss_pred --HHHHHHHhcccCCCcEEEEEcCCC-CCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHHHHHHhh-hcchhhHH
Q 041333 175 --ALREGMKRGYVKSCDFVVIFDADF-QPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMTRLQEMS-LDYHFTVE 250 (513)
Q Consensus 175 --aln~gl~~a~~~~~d~I~~lDaD~-~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~ 250 (513)
|+..|++.+ +||+|+++|||. -++|+++.+++..++ .+.++|.+... .....+-.++.-... +...+..
T Consensus 80 ~~A~~~g~~~a---~gd~lvflDADl~~~~pe~i~~L~~~i~--~g~d~V~g~y~-R~~~~grvt~~l~~pll~~l~~~- 152 (381)
T d2bo4a1 80 NTALRYFLEET---QWERIHFYDADITSFGPDWITKAEEAAD--FGYGLVRHYFP-RASTDAMITWMITRTGFALLWPH- 152 (381)
T ss_dssp HHHHHHHHHHC---CCSEEEECCTTCSSCCHHHHHHHHHHHH--TTCSEEEEECC-CCTTSCHHHHHTHHHHHHHHCTT-
T ss_pred HHHHHHHHHhC---CCCEEEEEcCCcCcCCHHHHHHHHHHHh--hhcCeEEEeec-cccCCCceehHhhHHHHHHHhhh-
Confidence 566666778 999999999997 578999999999984 34556655321 112222233211110 0010100
Q ss_pred hhhcccCCCccccccceeeeeHHHHHHcC----CCCCCCccchHHHHHHHhhCCCeEEEecccc
Q 041333 251 QEVGSSTHAFFGFNGTAGVWRIAAVNEAG----GWKDRTTVEDMDLAVRASLKGWKFLYLGTVK 310 (513)
Q Consensus 251 ~~~~~~~~~~~~~~G~~~~~rr~~l~~~g----g~~~~~~~ED~~l~~rl~~~G~~i~~~~~~~ 310 (513)
........ .-|+..+++|++++++- .+.+...+=|.++...+.++|.|+..+|.+.
T Consensus 153 -~~~~~i~d---Pl~G~~a~~R~~~~~L~~~~~v~~~~~~G~Di~lt~~A~~~G~rI~EV~i~~ 212 (381)
T d2bo4a1 153 -TELSWIEQ---PLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIPE 212 (381)
T ss_dssp -SSGGGCSC---TTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECTT
T ss_pred -hccccccc---CCcccceeeHHHHHHhhhhccccccCCcccchHHHHHHHHcCCeEEecCCCH
Confidence 00111111 12556799999997651 1122346789999999999999999887543
No 5
>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]}
Probab=97.99 E-value=1.9e-06 Score=79.28 Aligned_cols=180 Identities=16% Similarity=0.130 Sum_probs=108.4
Q ss_pred CCcEEEEEeccCChHHHHHHHHHHH---c-CCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCC
Q 041333 96 YPMVLVQIPMFNEREVYQLSIGAAC---G-LSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGY 171 (513)
Q Consensus 96 ~P~VsIiIP~yne~~~l~~~l~sl~---~-q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~ 171 (513)
.-+|+||||-+|.++.+...+..+. + |. ....|+|++..++. .-.
T Consensus 48 ~~kvaIIIPyRdR~~hL~~fl~~l~~~L~~q~---~~y~I~vieQ~~~~----------------------------~FN 96 (271)
T d1pzta_ 48 PHKVAIIIPFRNRQEHLKYWLYYLHPILQRQQ---LDYGIYVINQAGES----------------------------MFN 96 (271)
T ss_dssp SCEEEEEEEESSCHHHHHHHHHHHHHHHHHTT---CEEEEEEEEECSSS----------------------------CCC
T ss_pred cceEEEEEecCChHHHHHHHHHHHHHHHHhcC---CCEEEEEEeccCCc----------------------------chh
Confidence 3479999999999987776555543 2 32 23445455543321 122
Q ss_pred ChhHHHHHHHhccc-CCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHHHHHHhhhcchhhHH
Q 041333 172 KAGALREGMKRGYV-KSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMTRLQEMSLDYHFTVE 250 (513)
Q Consensus 172 Ka~aln~gl~~a~~-~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 250 (513)
++..+|.|+..|.. ...+++++.|.|..|..+.... .. .+. ..+.....+ ....
T Consensus 97 Rg~llNiGf~~a~~~~~~~~~ifHDVDllP~~~~~~Y---~~--~~~-------p~h~~~~~~------~~~~------- 151 (271)
T d1pzta_ 97 RAKLLNVGFKEALKDYDYNCFVFSDVDLIPMNDHNTY---RC--FSQ-------PRHISVAMD------KFGF------- 151 (271)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEECTTEEESBTTSCC---SC--CSS-------CEECCCEEG------GGTT-------
T ss_pred hhhhhhHHHHHhhhccCccEEEEecCCcCcccccccc---cc--ccc-------Ccceeeecc------cccc-------
Confidence 66788998887632 3678899999999986654211 00 010 000000000 0000
Q ss_pred hhhcccCCCccccccceeeeeHHHHHHcCCCCCCC---ccchHHHHHHHhhCCCeEEEeccccc-----cc-------cc
Q 041333 251 QEVGSSTHAFFGFNGTAGVWRIAAVNEAGGWKDRT---TVEDMDLAVRASLKGWKFLYLGTVKV-----KN-------EL 315 (513)
Q Consensus 251 ~~~~~~~~~~~~~~G~~~~~rr~~l~~~gg~~~~~---~~ED~~l~~rl~~~G~~i~~~~~~~~-----~~-------~~ 315 (513)
......+.|+..+++++.+++++||++.. .+||-|+..|+..+|.++...+.... .| .-
T Consensus 152 ------~~~y~~~~GGv~~~~k~~f~kINGfsN~ywGWGgEDddl~~R~~~~g~~i~R~~~~~~~y~~l~H~~d~~~~~n 225 (271)
T d1pzta_ 152 ------SLPYVQYFGGVSALSKQQFLSINGFPNNYWGAGGEDDDIYNRLAFRGMSVSRPNAVIGKTRMIRHSRDKKNEPN 225 (271)
T ss_dssp ------SCSCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCCTTTTEEEECCCSSCCCCCCC
T ss_pred ------ccccccccceeeeecHHHHhhcCCCCccccCCccccHHHHHHHHHcCCeEEccCCCccccceeeccCCcccccc
Confidence 00011134778889999999999999876 78999999999999988765433221 11 12
Q ss_pred CcCHHHHHHHHHhhhhchhHHH
Q 041333 316 PSTFKAYRYQQHRWSCGPANLF 337 (513)
Q Consensus 316 p~~~~~~~~Qr~RW~~G~~~~~ 337 (513)
+..+....+.+.||....+..+
T Consensus 226 ~~r~~~l~~~~~~~~~dGLnsl 247 (271)
T d1pzta_ 226 PQRFDRIAHTKETMLSDGLNSL 247 (271)
T ss_dssp CCCCCCHHHHHHHTTTSSGGGC
T ss_pred hHHHHHHHHHhhcccCCCCcce
Confidence 3345566677788876655443
No 6
>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=97.86 E-value=2.9e-05 Score=73.19 Aligned_cols=182 Identities=14% Similarity=0.094 Sum_probs=97.4
Q ss_pred cEEEEEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCC------C
Q 041333 98 MVLVQIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKG------Y 171 (513)
Q Consensus 98 ~VsIiIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g------~ 171 (513)
-|-|+|-+||.+ .+++||+|++++.-..++..|+|..|+.++..+..++ ++ +..+.++..++... .
T Consensus 3 viPVlv~a~NRP-~l~r~LesLlk~~p~~~~~~I~Vs~DG~~~~~~~~v~----~~---~~~v~~I~~~~~~~~~~~~~~ 74 (343)
T d1fo8a_ 3 VIPILVIACDRS-TVRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIA----SY---GSAVTHIRQPDLSNIAVQPDH 74 (343)
T ss_dssp CCCEEEEESSCT-THHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHH----TT---GGGSEEEECSCCCCCCCCTTC
T ss_pred cccEEEEEcCHH-HHHHHHHHHHhcCccccCccEEEEecCCchhHHHHHH----HH---HHHHHHhcCCccccceecchh
Confidence 355999999998 5899999998764223333233444444443333333 22 12344443321111 0
Q ss_pred ChhHHHHH--------HHhccc-CCCcEEEEEcCCCCCChHHH---HHHHHHHhcCCCeeEEEeeEEEecCCCchHHHHH
Q 041333 172 KAGALREG--------MKRGYV-KSCDFVVIFDADFQPESDFL---TRTIPFLVHNPQLALVQARWEFVNADECLMTRLQ 239 (513)
Q Consensus 172 Ka~aln~g--------l~~a~~-~~~d~I~~lDaD~~~~pd~L---~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~ 239 (513)
+...-|.+ +..... .++|.++++.+|..+.||++ ..+++.++.|+++..|++--. |........
T Consensus 75 ~k~~~n~giarhy~~AL~~~F~~~~~~~~IiLEDDl~~spdFf~y~~~~l~~~~~D~~i~~IS~wNd--nG~~~~~~~-- 150 (343)
T d1fo8a_ 75 RKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAWND--NGKEQMVDS-- 150 (343)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESCCT--TCBGGGSCT--
T ss_pred hcccchhHHHHHHHHHHHHHhcccCCceEEEEecCceeeHHHHHHHHHHHHHHhcCCCEEEEecccc--CCCcccccC--
Confidence 11111222 222211 15799999999999999988 556677788999999976521 110000000
Q ss_pred HhhhcchhhHHhhhcccCCCccccccceeeeeHHHHHHcCC-CCCCCccchHHHHHH--HhhCCCeEEEecc
Q 041333 240 EMSLDYHFTVEQEVGSSTHAFFGFNGTAGVWRIAAVNEAGG-WKDRTTVEDMDLAVR--ASLKGWKFLYLGT 308 (513)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~gg-~~~~~~~ED~~l~~r--l~~~G~~i~~~~~ 308 (513)
...........++|-+-+..|+.++++.. |+ ..++|..+| -+++|..+ ..|+
T Consensus 151 ------------~~~~~lyrs~~fpg~GW~~~r~~W~el~~kwp----~~~Wd~w~r~~~~rkgr~c-I~Pe 205 (343)
T d1fo8a_ 151 ------------SKPELLYRTDFFPGLGWLLLAELWAELEPKWP----KAFWDDWMRRPEQRKGRAC-VRPE 205 (343)
T ss_dssp ------------TCTTCEEEESSCCCSSEEEEHHHHHHHGGGCC----SSCHHHHHTSHHHHTTCEE-EEES
T ss_pred ------------CCCceEEeecCCCchhhheeHHHHHHhhhcCC----CCCcHHhhhhHHhcCCCee-eccC
Confidence 00000011112457788889999988642 32 234555555 45677544 4555
No 7
>d1v82a_ c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.35 E-value=0.36 Score=42.19 Aligned_cols=102 Identities=11% Similarity=0.092 Sum_probs=59.4
Q ss_pred CCcEEEEEeccCCh---HHHHHHHHHHHcCCCCCCeeEEEEEeCCCc--hhHHHHHHHHHHHhhccCccEEEEEcCCC--
Q 041333 96 YPMVLVQIPMFNER---EVYQLSIGAACGLSWPSDRLIIQVLDDSTD--LTIKDMVELECQRWASKGINIKYEVRDNR-- 168 (513)
Q Consensus 96 ~P~VsIiIP~yne~---~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D--~t~~~l~~~~~~~~~~~~~~v~~~~~~~~-- 168 (513)
+|.|-||-|+|... ..+.+.-..+..- |+. .-| |+.|+.+ +.+..+++ +.|...+++..+.+
T Consensus 1 lp~I~vVTPTy~R~~Q~~~LtRLa~TL~lV--p~l-~WI-VVEda~~~t~~va~lL~-------~sgl~y~HL~~~~p~~ 69 (252)
T d1v82a_ 1 LPTIHVVTPTYSRPVQKAELTRMANTLLHV--PNL-HWL-VVEDAPRRTPLTARLLR-------DTGLNYTHLHVETPRN 69 (252)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHHTTC--SSE-EEE-EEESSSSCCHHHHHHHH-------HHCCEEEEEECCCCHH
T ss_pred CCCEEEECCCCCchhhHHHHHHHHhHHhcC--CCc-eEE-EEeCCCCCCHHHHHHHH-------HcCCceEeeccCCCcc
Confidence 47899999999997 4566666665433 542 333 4544332 22222333 12444444432211
Q ss_pred --------CCCC---hhHHHHHHHhccc------CCCcEEEEEcCCCCCChHHHHHH
Q 041333 169 --------KGYK---AGALREGMKRGYV------KSCDFVVIFDADFQPESDFLTRT 208 (513)
Q Consensus 169 --------~g~K---a~aln~gl~~a~~------~~~d~I~~lDaD~~~~pd~L~~l 208 (513)
...+ ...+|.|++.... ...-+|.|.|+|...+-+.++++
T Consensus 70 ~~~~~~~~~~~~~rg~~qRn~aL~~iR~~~~~~~~~~GVVyFADDdNtYsl~lFdem 126 (252)
T d1v82a_ 70 YKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEM 126 (252)
T ss_dssp HHCCC-----CCCTTHHHHHHHHHHHHHHSCTTCCCCEEEEECCTTSEECHHHHHHH
T ss_pred cccccccccccccccHHHHHHHHHHHHHhcccccCcceEEEEecCCCcccHHHHHHH
Confidence 0001 3479999997631 13468889999999999888774
No 8
>d3cu0a1 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.08 E-value=1.3 Score=38.53 Aligned_cols=99 Identities=11% Similarity=0.111 Sum_probs=57.6
Q ss_pred EEEEEeccCCh---HHHHHHHHHHHcCCCCCCeeEEEEEeCCCchh--HHHHHHHHHHHhhccCccEEEEEcCCCCCC--
Q 041333 99 VLVQIPMFNER---EVYQLSIGAACGLSWPSDRLIIQVLDDSTDLT--IKDMVELECQRWASKGINIKYEVRDNRKGY-- 171 (513)
Q Consensus 99 VsIiIP~yne~---~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t--~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~-- 171 (513)
|-||-|+|... ..+.+.-..+..- |+. .-| |+.|+...| +..+++ ..|...+++..+.+...
T Consensus 3 IyvVTPTY~R~~Q~a~LtRLa~TL~lV--p~l-~WI-VVEDa~~~t~~v~~lL~-------~sgl~y~HL~~~tp~~~~~ 71 (261)
T d3cu0a1 3 IYVVTPTYARLVQKAELVRLSQTLSLV--PRL-HWL-LVEDAEGPTPLVSGLLA-------ASGLLFTHLVVLTPKAQRL 71 (261)
T ss_dssp EEEEEEECCSTTHHHHHHHHHHHHTTS--SSE-EEE-EEESSSSCCHHHHHHHH-------HHCSEEEEEECCCC-----
T ss_pred EEEECCCCCCchhHHHHHHHHHHHhcC--CCe-eEE-EEECCCCCCHHHHHHHH-------HcCCceEEeecCCchhhcc
Confidence 56888999987 4566666655544 542 233 555443332 232332 22444444432211110
Q ss_pred ----------C-hhHHHHHHHhcccC--------------CCcEEEEEcCCCCCChHHHHHH
Q 041333 172 ----------K-AGALREGMKRGYVK--------------SCDFVVIFDADFQPESDFLTRT 208 (513)
Q Consensus 172 ----------K-a~aln~gl~~a~~~--------------~~d~I~~lDaD~~~~pd~L~~l 208 (513)
+ ...+|.|++..... ..-+|.|.|+|...+-+.++++
T Consensus 72 ~~~~~~~~~prgv~qRn~aL~~ir~~~~~~~~~~~~~~~~~~GVVyFADDdNtYsl~LF~em 133 (261)
T d3cu0a1 72 REGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 133 (261)
T ss_dssp ------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred cccCcccccccCHHHHHHHHHHHHHcccccccccccccCCCceEEEEecCCCcccHHHHHHH
Confidence 1 24789999988421 1368889999999999988884
No 9
>d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=86.95 E-value=2.4 Score=36.10 Aligned_cols=95 Identities=11% Similarity=0.041 Sum_probs=57.0
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccC
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVK 186 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~ 186 (513)
|....|+.+++.+.++. ..+++| |+.. .+.. ... + .+....+...+...| ..+++..+.......
T Consensus 27 ~Gkpli~~~l~~l~~~~--~~~iiv-v~~~-~~~~---~~~-----~--~~~~~~~~~~~~~~g-~~~~~~~a~~~l~~~ 91 (250)
T d1g97a2 27 AGISMLEHVFRSVGAIQ--PEKTVT-VVGH-KAEL---VEE-----V--LAGQTEFVTQSEQLG-TGHAVMMTEPILEGL 91 (250)
T ss_dssp TTEEHHHHHHHHHGGGC--CSEEEE-EECT-THHH---HHH-----H--TTTTSEEEECSSCCC-HHHHHHTTHHHHTTC
T ss_pred CCeeHHHHHHHHHHHcC--CCeEEE-eccc-ccch---hhh-----h--ccccccccccccccc-cchHHHHHHHhhhcc
Confidence 45668999999998864 244444 4433 2211 111 1 123455555555555 566766665554222
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHhcCC
Q 041333 187 SCDFVVIFDADFQPESDFLTRTIPFLVHNP 216 (513)
Q Consensus 187 ~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~ 216 (513)
..+.+++.++|....++-+++++.....+.
T Consensus 92 ~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~ 121 (250)
T d1g97a2 92 SGHTLVIAGDTPLITGESLKNLIDFHINHK 121 (250)
T ss_dssp CSEEEEEETTCTTCCHHHHHHHHHHHHHTT
T ss_pred cCcceEEecCCCccCHHHHHHHHHHHhhhc
Confidence 456667777778889999999998774443
No 10
>d1qwja_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.08 E-value=6 Score=33.07 Aligned_cols=109 Identities=13% Similarity=0.073 Sum_probs=62.5
Q ss_pred CcEEEEEeccCCh--------------HHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEE
Q 041333 97 PMVLVQIPMFNER--------------EVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKY 162 (513)
Q Consensus 97 P~VsIiIP~yne~--------------~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~ 162 (513)
|+|..+||++... ..++.+++++.+..+- ++ |+|..| |+.....++ ++ ++..
T Consensus 2 ~ki~aiIpaR~~S~Rlp~K~l~~i~gkpLi~~~i~~~~ks~~i-d~--Iivstd--~~~i~~~~~----~~-----~~~~ 67 (228)
T d1qwja_ 2 PHLAALVLARGGSKGIPLKNIKRLAGVPLIGWVLRAALDAGVF-QS--VWVSTD--HDEIENVAK----QF-----GAQV 67 (228)
T ss_dssp CCEEEEEECCSCCSSSSCTTTSEETTEEHHHHHHHHHHHHTCC-SE--EEEEES--CHHHHHHHH----HT-----TCEE
T ss_pred CCEEEEeccCCCCCCCCCcchhhhCCeeHHHHHHHHHHhcCCc-ce--EEEecc--hhhhhhhhh----hc-----Cccc
Confidence 5788888886433 3778888888876543 23 334443 223332332 22 3444
Q ss_pred EEcCC-CCCCChh---HHHHHHHhcccCCCcEEEEEcCCCCC-ChHHHHHHHHHHhcCCCeeEEE
Q 041333 163 EVRDN-RKGYKAG---ALREGMKRGYVKSCDFVVIFDADFQP-ESDFLTRTIPFLVHNPQLALVQ 222 (513)
Q Consensus 163 ~~~~~-~~g~Ka~---aln~gl~~a~~~~~d~I~~lDaD~~~-~pd~L~~l~~~~~~~~~v~~V~ 222 (513)
..++. ..+.... ....+++.- ...++++.+.+|+-+ .++.+++++..+. +.+.+.+.
T Consensus 68 ~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~iv~~~~~~P~~~~~~I~~~i~~~~-~~~~d~~~ 129 (228)
T d1qwja_ 68 HRRSSETSKDSSTSLDAIVEFLNYH--NEVDIVGNIQATSPCLHPTDLQKVAEMIR-EEGYDSVF 129 (228)
T ss_dssp EECCGGGSSTTCCHHHHHHHHHTTC--TTCSEEEEECTTCTTCCHHHHHHHHHHHH-SSCCSEEE
T ss_pred cccccccccccchhhhhhhhccccc--cccceeeeecccccccCchhhhhhhhhhh-ccCccccc
Confidence 44332 2232222 333344332 368999999999755 8999999999884 44554443
No 11
>d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=78.43 E-value=3.1 Score=37.14 Aligned_cols=102 Identities=10% Similarity=0.121 Sum_probs=64.9
Q ss_pred EEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHH
Q 041333 102 QIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMK 181 (513)
Q Consensus 102 iIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~ 181 (513)
++|++|. ..|...|+.+..... .++.| |+.....+..+ .........+.++.|...+.+.| -++|+..+.+
T Consensus 26 llpi~gk-PiI~~~l~~l~~~Gi--~ei~i-i~~~~~~~~i~----~~~~~~~~~g~~I~y~~q~~~~G-ta~ai~~a~~ 96 (292)
T d1fxoa_ 26 LLPVYDK-PMIYYPLSTLMLAGI--REILI-ISTPQDTPRFQ----QLLGDGSNWGLDLQYAVQPSPDG-LAQAFLIGES 96 (292)
T ss_dssp GSEETTE-ETTHHHHHHHHHTTC--CEEEE-EECTTTHHHHH----HHHTTSGGGTCEEEEEECSSCCC-GGGHHHHTHH
T ss_pred cCEECCE-ehHHHHHHHHHHCCC--CEEEE-EeCcCCHHHHH----HHhccccccCeEEEEccCCCCCc-HHHHHHhhhh
Confidence 4677777 577778887777643 23333 44433322222 22223334467899988887777 7999999988
Q ss_pred hcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcC
Q 041333 182 RGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHN 215 (513)
Q Consensus 182 ~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~ 215 (513)
... +.+.++++.+|...+.| +.+++....++
T Consensus 97 ~i~--~~~~~lil~dD~~~~~d-l~~ll~~h~~~ 127 (292)
T d1fxoa_ 97 FIG--NDLSALVLGDNLYYGHD-FHELLGSASQR 127 (292)
T ss_dssp HHT--TSEEEEEETTEEEECTT-HHHHHHHHHTC
T ss_pred hcC--CCceEEEEccccccCcC-HHHHHHHHHhC
Confidence 772 45677888888777776 56666655333
No 12
>d1eyra_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Neisseria meningitidis [TaxId: 487]}
Probab=77.23 E-value=2.5 Score=35.57 Aligned_cols=93 Identities=13% Similarity=0.135 Sum_probs=54.2
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCC-CCC---ChhHHHHHHHh
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNR-KGY---KAGALREGMKR 182 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~-~g~---Ka~aln~gl~~ 182 (513)
|....++.+++.+.+..+-+ + |+|..| |+....+++ .+ +. ....++.. .+. .......+++.
T Consensus 27 ~gkpLi~~~i~~~~~s~~~~-~--Iiv~td--~~~i~~i~~----~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (225)
T d1eyra_ 27 NGISLLGHTINAAISSKCFD-R--IIVSTD--GGLIAEEAK----NF---GV--EVVLRPAELASDTASSISGVIHALET 92 (225)
T ss_dssp TTEEHHHHHHHHHHHHTCCS-E--EEEEES--CHHHHHHHH----HT---TC--EEEECCHHHHSTTCCHHHHHHHHHHH
T ss_pred CCeEHHHHHHHHHHHcCCCc-e--EEEeec--cchhhhhhh----hh---cc--eeeeeccccccccccchhhccccccc
Confidence 55578899999999876542 3 335544 333333332 22 33 33333321 111 12233334433
Q ss_pred cccCCCcEEEEEcCCCCC-ChHHHHHHHHHHhc
Q 041333 183 GYVKSCDFVVIFDADFQP-ESDFLTRTIPFLVH 214 (513)
Q Consensus 183 a~~~~~d~I~~lDaD~~~-~pd~L~~l~~~~~~ 214 (513)
. ..+.|+|+.+.+|+-. +++.+.+++..+..
T Consensus 93 ~-~~~~d~ii~~~~~~P~~~~~~I~~~i~~~~~ 124 (225)
T d1eyra_ 93 I-GSNSGTVTLLQPTSPLRTGAHIREAFSLFDE 124 (225)
T ss_dssp H-TCCSEEEEECCTTCTTCCHHHHHHHHTTCCT
T ss_pred c-ccccceEEEeeccccccccccccccceeecc
Confidence 2 1378999999999866 89999999998843
No 13
>d1h7ea_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KpsU [TaxId: 562]}
Probab=73.56 E-value=23 Score=29.45 Aligned_cols=183 Identities=13% Similarity=0.078 Sum_probs=90.0
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccC
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVK 186 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~ 186 (513)
|..+.+..+++++.+...- +++ + |+-| ++...... +. .+.. ++.+++....-......+++..
T Consensus 25 ~GkPli~~~i~~a~~~~~~-d~I-i-v~td--~~~i~~~~----~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~--- 87 (245)
T d1h7ea_ 25 VGKPMIQHVYERALQVAGV-AEV-W-VATD--DPRVEQAV----QA---FGGK--AIMTRNDHESGTDRLVEVMHKV--- 87 (245)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CEE-E-EEES--CHHHHHHH----HH---TTCE--EEECCSCCSSHHHHHHHHHHHS---
T ss_pred CCccHHHHHHHHHHhCCCC-CeE-E-Eecc--cccchhhh----hh---cCce--EEEecCccccccHHHHHHHHhc---
Confidence 3445888999988876543 232 3 3333 22222222 12 2333 3333333222344556666666
Q ss_pred CCcEEEEEcCCCCC-ChHHHHHHHHHHhcCCCeeEEEeeEEEecC---CCchHHHHHHhhh-cchhhHHhh--hcccCCC
Q 041333 187 SCDFVVIFDADFQP-ESDFLTRTIPFLVHNPQLALVQARWEFVNA---DECLMTRLQEMSL-DYHFTVEQE--VGSSTHA 259 (513)
Q Consensus 187 ~~d~I~~lDaD~~~-~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~---~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~ 259 (513)
..|+++.+++|... +++.+..++..+..+.....+......... +............ ...+..... .......
T Consensus 88 ~~d~vv~l~~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (245)
T d1h7ea_ 88 EADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAISAAEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNAEKA 167 (245)
T ss_dssp CCSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEECHHHHTCTTSCEEEECTTCBEEEEESSCSSCCTTGGGC
T ss_pred CCCEEEEecchhhhcccccchhhhhcccccccccccccccccccccccCCcceeeccchhhhhhhhhhhhhhhhhccccc
Confidence 89999999999755 788999988877555444333322211110 0000000000000 000000000 0001111
Q ss_pred ccccccceeeeeHHHHHHcCCCCCCC--ccchHHHHHHHhhCCCeEEEec
Q 041333 260 FFGFNGTAGVWRIAAVNEAGGWKDRT--TVEDMDLAVRASLKGWKFLYLG 307 (513)
Q Consensus 260 ~~~~~G~~~~~rr~~l~~~gg~~~~~--~~ED~~l~~rl~~~G~~i~~~~ 307 (513)
.....++...|+++.+++...+.... ..|+.|. +|+..+|.++....
T Consensus 168 ~~~~~~g~~~~~~~~l~~~~~~~~s~~e~~e~ie~-lr~l~ng~~I~~~~ 216 (245)
T d1h7ea_ 168 RYLKHVGIYAYRRDVLQNYSQLPESMPEQAESLEQ-LRLMNAGINIRTFE 216 (245)
T ss_dssp CEEEEEEEEEEEHHHHHHGGGSCCCHHHHHHTCTT-HHHHHTTCCEEEEE
T ss_pred ccceeeeeEEeeeccccccccccCChhhhhhhHHH-HHHHHCCCeEEEEE
Confidence 11133567789999999876665432 3455554 46778999986665
No 14
>d1mc3a_ c.68.1.6 (A:) RffH {Escherichia coli [TaxId: 562]}
Probab=70.19 E-value=3.3 Score=36.94 Aligned_cols=191 Identities=10% Similarity=0.047 Sum_probs=96.8
Q ss_pred EEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHH
Q 041333 102 QIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMK 181 (513)
Q Consensus 102 iIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~ 181 (513)
++|++|. ..+...|+.+..... .++.| |+.....+. .+....+..+-+.++.|+..+++.| -++|+..+-+
T Consensus 26 llpi~~k-p~i~~~l~~l~~~gi--~~i~i-v~~~~~~~~----~~~~~~~g~~~gi~I~y~~Q~~plG-ta~Ai~~a~~ 96 (291)
T d1mc3a_ 26 LLPIYDK-PMIYYPLSVLMLAGI--REILI-ITTPEDKGY----FQRLLGDGSEFGIQLEYAEQPSPDG-LAQAFIIGET 96 (291)
T ss_dssp GSEETTE-ETTHHHHHHHHHTTC--CEEEE-EECTTTHHH----HHHHHTTSGGGTCEEEEEECSSCCC-STHHHHHTHH
T ss_pred ccEECCE-ehHHHHHHHHHHcCC--CEEEE-EeCcccHHH----HHHHhCchHhhCcEEEEEECCCCCc-hHHHHHHHHH
Confidence 5677776 477788888877653 24444 443322222 2222222223478899998888877 7999999888
Q ss_pred hcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHHHHHHhhhcchh----hHHhhhcccC
Q 041333 182 RGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMTRLQEMSLDYHF----TVEQEVGSST 257 (513)
Q Consensus 182 ~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 257 (513)
... ..++++++-+|.....++-..+..+.+++.+..++... ..++... . -.+.+... -.+.+. ...
T Consensus 97 fi~--~~~~~lvlgddi~~~~~~~~~l~~~~~~~~~atI~~~~--V~dP~~y--G---Vve~d~~g~i~~i~EKP~-~p~ 166 (291)
T d1mc3a_ 97 FLN--GEPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQ--VMDPERF--G---VVEFDDNFRAISLEEKPK-QPK 166 (291)
T ss_dssp HHT--TSCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEE--CSCCSSS--B---BCEEETTEEEEECCBSCS-SCS
T ss_pred HhC--CCCeEEEECCCcccCcCHHHHHHHHHhCcCCcEEEEEE--CCCcccC--C---CceeccCcceeEEEECCC-CCC
Confidence 771 34567777777666666544444444333333233222 2232110 0 01111100 111211 111
Q ss_pred CCccccccceeeeeHHHHHHcCCCCCCCcc--chHHHHHHHhhCCC-eEEEeccccccc
Q 041333 258 HAFFGFNGTAGVWRIAAVNEAGGWKDRTTV--EDMDLAVRASLKGW-KFLYLGTVKVKN 313 (513)
Q Consensus 258 ~~~~~~~G~~~~~rr~~l~~~gg~~~~~~~--ED~~l~~rl~~~G~-~i~~~~~~~~~~ 313 (513)
.. . .+.+..+|..++++.+-......-+ |=.|+...+.+.|. ++...+....|.
T Consensus 167 Sn-~-a~~GiY~f~~~v~~~~~~lk~s~rgE~EItdl~~~~l~~~~~~~~~~~~g~~W~ 223 (291)
T d1mc3a_ 167 SN-W-AVTGLYFYDSKVVEYAKQVKPSERGELEITSINQMYLEAGNLTVELLGRGFAWL 223 (291)
T ss_dssp CS-E-EEEEEEECCTHHHHHHHSCCCCSSSSCCHHHHHHHHHHTTCEEEEECCTTCEEE
T ss_pred CC-e-EEEEEEEeChHHHHHHhcCCCCCCCceeehHHHHHHHHcCCceEEEecCCCEEE
Confidence 11 1 2244578899999876444332222 33455565555554 555555544443
No 15
>d1lvwa_ c.68.1.6 (A:) RmlA (RfbA) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=68.97 E-value=8.1 Score=34.13 Aligned_cols=99 Identities=10% Similarity=0.107 Sum_probs=60.2
Q ss_pred EeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHh
Q 041333 103 IPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKR 182 (513)
Q Consensus 103 IP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~ 182 (513)
+|..|. ..++.+++.+..+.. .+++| |+......- .+....+....+.++.++..+++.| -++|+..+.+.
T Consensus 29 l~i~~k-pii~~~l~~l~~~g~--~~i~I-v~~~~~~~~----~~~~~~~~~~~~~~i~~v~e~~~~g-ta~Al~~a~~~ 99 (295)
T d1lvwa_ 29 LPIYDK-PMIYYPLSVLMLAGI--RDILI-ISTPRDLPL----YRDLLGDGSQFGVRFSYRVQEEPRG-IADAFIVGKDF 99 (295)
T ss_dssp SEETTE-ETTHHHHHHHHHTTC--CEEEE-EECTTTHHH----HHHHHTTSGGGTSEEEEEECSSCCC-GGGHHHHTHHH
T ss_pred CeECCE-EHHHHHHHHHHHCCC--CeEEE-EeCcccHHH----HHHHhccchhcCCEEEEEECCCCCC-HHHHHHHHHHH
Confidence 566554 678888888877642 34433 554433222 2222222223466788888877776 68898888777
Q ss_pred cccCCCcEEEEEcCCCCCChHHHHHHHHHH
Q 041333 183 GYVKSCDFVVIFDADFQPESDFLTRTIPFL 212 (513)
Q Consensus 183 a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~ 212 (513)
. .+.++++++-+|...+.+.......+.
T Consensus 100 l--~~~~~~li~~~d~~~~~~~~~~~~~~~ 127 (295)
T d1lvwa_ 100 I--GDSKVALVLGDNVFYGHRFSEILRRAA 127 (295)
T ss_dssp H--TTSCEEEEETTCCEECTTHHHHHHHHH
T ss_pred c--CCCCEEEEeCCcceechhHHHHHHHHH
Confidence 6 245688888888776666555444444
No 16
>d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]}
Probab=61.29 E-value=29 Score=28.52 Aligned_cols=156 Identities=10% Similarity=0.152 Sum_probs=83.8
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccC
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVK 186 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~ 186 (513)
+....+..+++++.+.. +.+++ |++.++ . + .. +++ ..++.++.... ....+...|++..
T Consensus 27 ~gkpii~~~l~~~~~~~-~~~~I-vvv~~~--~---~-~~----~~~---~~~~~~v~Gg~---~r~~Sv~~gl~~~--- 85 (205)
T d1w55a1 27 GNDPLWLYATKNLSSFY-PFKKI-VVTSSN--I---T-YM----KKF---TKNYEFIEGGD---TRAESLKKALELI--- 85 (205)
T ss_dssp BTEEHHHHHHHHHHTTS-CCSCE-EEEESC--H---H-HH----HTT---CSSSEEEECCS---SHHHHHHHHHTTC---
T ss_pred CCEEHHHHHHHHHHhhc-ccccc-cccccc--c---c-cc----ccc---ccccccccccc---chhhhhhhhhhhh---
Confidence 55568888999887642 22343 434432 1 1 11 112 23445553111 1245677899988
Q ss_pred CCcEEEEEcCCC-CCChHHHHHHHHHHhcCCCeeEEEeeEEEecCCCchHHHHHHhhhcchhhHHhhhcccCCCcccccc
Q 041333 187 SCDFVVIFDADF-QPESDFLTRTIPFLVHNPQLALVQARWEFVNADECLMTRLQEMSLDYHFTVEQEVGSSTHAFFGFNG 265 (513)
Q Consensus 187 ~~d~I~~lDaD~-~~~pd~L~~l~~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 265 (513)
+.|+|++.|+|. .++++.+++++..... .+..+..-+. .+ .. .. .. .. . .++... ..=
T Consensus 86 ~~~~VlIhd~~rP~i~~~~i~~li~~~~~-~~~~i~~~~~--~d--ti-~~----~~-~~-~-----~R~~l~----~~q 144 (205)
T d1w55a1 86 DSEFVMVSDVARVLVSKNLFDRLIENLDK-ADCITPALKV--AD--TT-LF----DN-EA-L-----QREKIK----LIQ 144 (205)
T ss_dssp CSSEEEEEETTCTTCCHHHHHHHHTTGGG-CSEEEEEECC--CS--CE-EE----TT-EE-E-----CGGGCC----EEC
T ss_pred hhcceeeeccCcccCcHHHHHHHHhhhhc-cccccccccc--cc--cc-cc----cc-cc-c-----cchhee----eee
Confidence 999999999995 5589999999988743 3332222221 11 10 00 00 00 0 011111 112
Q ss_pred ceeeeeHHHHHHcCCCCCC-CccchHHHHHHHhhCCCeEEEeccc
Q 041333 266 TAGVWRIAAVNEAGGWKDR-TTVEDMDLAVRASLKGWKFLYLGTV 309 (513)
Q Consensus 266 ~~~~~rr~~l~~~gg~~~~-~~~ED~~l~~rl~~~G~~i~~~~~~ 309 (513)
+--+|+++.++++ ++.. ..+||..+.. ..|.++..++..
T Consensus 145 TPQ~f~~~~l~~a--~~~~~~~tDd~~~~~---~~g~~v~~i~g~ 184 (205)
T d1w55a1 145 TPQISKTKLLKKA--LDQNLEFTDDSTAIA---AMGGKIWFVEGE 184 (205)
T ss_dssp SCEEEEHHHHHHH--TSSCCCCSSHHHHHH---TTTCCEEEEECC
T ss_pred cchhhhhHHHHHH--HHcCCCCCcHHHHHH---HcCCCEEEEecC
Confidence 2246888888876 3332 3677775544 568888888753
No 17
>d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=60.76 E-value=42 Score=27.57 Aligned_cols=94 Identities=16% Similarity=0.157 Sum_probs=53.2
Q ss_pred EeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHh
Q 041333 103 IPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKR 182 (513)
Q Consensus 103 IP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~ 182 (513)
+|+-+ ...|+..|+++.+.. ..+++| |+....+. .. ++ ..+....+...+...| .++++..+.+.
T Consensus 25 i~i~g-kpiie~~i~~l~~~~--~~~iii-v~~~~~~~----~~-----~~-~~~~~~~~~~~~~~~g-~~~~~~~~~~~ 89 (248)
T d2oi6a2 25 HTLAG-KAMVQHVIDAANELG--AAHVHL-VYGHGGDL----LK-----QA-LKDDNLNWVLQAEQLG-TGHAMQQAAPF 89 (248)
T ss_dssp SEETT-EEHHHHHHHHHHHHT--CSCEEE-EESSCHHH----HH-----HH-CCCTTEEEEECSSCCC-HHHHHHHHGGG
T ss_pred EEECC-hhHHHHHHHHHHHcC--CcEEEe-ccCcccce----ee-----ee-cccccccccccccCcc-cHHHHHhhhhh
Confidence 45544 458899999888754 344444 44432221 11 11 2345556665665556 57777777765
Q ss_pred cccCCCcEEEEEcCCCCCChHHHHHHHHHH
Q 041333 183 GYVKSCDFVVIFDADFQPESDFLTRTIPFL 212 (513)
Q Consensus 183 a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~ 212 (513)
.. ...+.++..|++...++..+.......
T Consensus 90 i~-~~~~~~i~~~d~~~~~~~~~~~~~~~~ 118 (248)
T d2oi6a2 90 FA-DDEDILMLYGDVPLISVETLQRLRDAK 118 (248)
T ss_dssp SC-TTSEEEEEETTCTTCCHHHHHHHHHHC
T ss_pred hc-cccceeeecCccccccchhHHHHHHHh
Confidence 42 244555555555666777777776554
No 18
>d1vgwa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Neisseria gonorrhoeae [TaxId: 485]}
Probab=55.25 E-value=25 Score=29.06 Aligned_cols=103 Identities=13% Similarity=0.080 Sum_probs=53.6
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCC--CChhHHHHHHHhcc
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKG--YKAGALREGMKRGY 184 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g--~Ka~aln~gl~~a~ 184 (513)
+....+..+++.+.+...- ++ +|+|.+. .+...+... .. ...+.......... .-..+++...+...
T Consensus 29 ~gkpli~~~i~~~~~~~~~-~~-iivv~~~-~~~~~~~~~----~~----~~~~~~~~~g~~~~~~s~~~~l~~~~~~~~ 97 (226)
T d1vgwa_ 29 GSKTVLEHVLGIFERHEAV-DL-TVVVVSP-EDTFADKVQ----TA----FPQVRVWKNGGQTRAETVRNGVAKLLETGL 97 (226)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CE-EEEECCT-TCSTHHHHH----HH----CTTSEEECCCCSSHHHHHHHHHHHHHHHSS
T ss_pred CCEEHHHHHHHHHHhCCCc-cc-cceecch-hhhhhhhhc----cc----ccceeeccccccccchhhhHHHHHHHHhcc
Confidence 4556889999988765432 23 3334433 333333221 11 22333332211110 01123333333322
Q ss_pred cCCCcEEEEEcCCC-CCChHHHHHHHHHHhcCCCeeE
Q 041333 185 VKSCDFVVIFDADF-QPESDFLTRTIPFLVHNPQLAL 220 (513)
Q Consensus 185 ~~~~d~I~~lDaD~-~~~pd~L~~l~~~~~~~~~v~~ 220 (513)
..+.|++++.|+|. ..+++.+.+++..+..+...+.
T Consensus 98 ~~~~~~v~~~~~~~P~i~~~~i~~~i~~~~~~~~~~i 134 (226)
T d1vgwa_ 98 AAETDNILVHDAARCCLPSEALARLIEQAGNAAEGGI 134 (226)
T ss_dssp SCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCTTCEE
T ss_pred cccccceeecccccccCcHHHHHHHHhhhccccccee
Confidence 24789999999995 4588999999988844444333
No 19
>d1vpaa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thermotoga maritima [TaxId: 2336]}
Probab=51.20 E-value=11 Score=31.27 Aligned_cols=99 Identities=9% Similarity=0.083 Sum_probs=55.0
Q ss_pred EeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHh
Q 041333 103 IPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKR 182 (513)
Q Consensus 103 IP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~ 182 (513)
++. +....++.+|+++.+...- ++++| |.++ +..+.. + +.......+.++..... ...+...++..
T Consensus 26 ~~i-~gkpli~~~i~~~~~~~~~-~~Iiv-v~~~---~~~~~~-~----~~~~~~~~~~~~~~~~~---~~~s~~~~~~~ 91 (221)
T d1vpaa_ 26 LEI-EGRMLFEYPLSTFLKSEAI-DGVVI-VTRR---EWFEVV-E----KRVFHEKVLGIVEGGDT---RSQSVRSALEF 91 (221)
T ss_dssp CEE-TTEETTHHHHHHHHHCTTC-SEEEE-EECG---GGHHHH-H----TTCCCTTEEEEEECCSS---HHHHHHHHHHH
T ss_pred eEE-CCEEHHHHHHHHHHhcccc-ccceE-Eecc---hhhhHH-H----hhhcccccccccccccc---ccchHHHHHHH
Confidence 455 4456788899988875432 34433 4432 222211 1 11122334444432221 22344445544
Q ss_pred cccCCCcEEEEEcCCCCC-ChHHHHHHHHHHhcC
Q 041333 183 GYVKSCDFVVIFDADFQP-ESDFLTRTIPFLVHN 215 (513)
Q Consensus 183 a~~~~~d~I~~lDaD~~~-~pd~L~~l~~~~~~~ 215 (513)
......++++++|+|.-. +++.+.+++..+...
T Consensus 92 ~~~~~~~~v~~~~~d~p~~~~~~i~~li~~~~~~ 125 (221)
T d1vpaa_ 92 LEKFSPSYVLVHDSARPFLRKKHVSEVLRRARET 125 (221)
T ss_dssp HGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHH
T ss_pred HHhcCCCcEEEeccccccccHHHHHhhhhhhccc
Confidence 433478999999999655 899999999888433
No 20
>d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]}
Probab=50.33 E-value=25 Score=29.09 Aligned_cols=94 Identities=12% Similarity=0.077 Sum_probs=52.7
Q ss_pred CChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCC--hhHHHHHHHhcc
Q 041333 107 NEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYK--AGALREGMKRGY 184 (513)
Q Consensus 107 ne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~K--a~aln~gl~~a~ 184 (513)
|....+..+++++.+.. ....+|+|.+....+ ..+...+ ..+.++.++. ||+ ..+.-.|++..
T Consensus 30 ~Gkpli~~~l~~~~~~~--~~~~Iivv~~~~~~~----~~~~~~~---~~~~~~~~~~-----gg~~r~~sv~~~l~~~- 94 (226)
T d1w77a1 30 LGQPIALYSFFTFSRMP--EVKEIVVVCDPFFRD----IFEEYEE---SIDVDLRFAI-----PGKERQDSVYSGLQEI- 94 (226)
T ss_dssp TTEEHHHHHHHHHHTCT--TEEEEEEECCGGGTH----HHHTTTT---SCSSEEEEEC-----CCSSHHHHHHHHHHTS-
T ss_pred CCeeHHHHHHHHHHhhc--cccceeeccchhhhh----hhhcccc---cccccccccc-----ccchhhhhhhhhHhhh-
Confidence 45568899999887653 223333344432222 2221111 1233444441 223 33455566554
Q ss_pred cCCCcEEEEEcCCCCC-ChHHHHHHHHHHhcC
Q 041333 185 VKSCDFVVIFDADFQP-ESDFLTRTIPFLVHN 215 (513)
Q Consensus 185 ~~~~d~I~~lDaD~~~-~pd~L~~l~~~~~~~ 215 (513)
....|+|++.|+|.-+ +++.+.++......+
T Consensus 95 ~~~~~~Vli~d~~~P~i~~~~i~~l~~~~~~~ 126 (226)
T d1w77a1 95 DVNSELVCIHDSARPLVNTEDVEKVLKDGSAV 126 (226)
T ss_dssp CTTCSEEEEEETTCTTCCHHHHHHHHHHHHHH
T ss_pred ccccccceecccccccccHHHhhhhhhhhhcc
Confidence 2367999999999654 889999998877433
No 21
>d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]}
Probab=46.96 E-value=37 Score=26.70 Aligned_cols=37 Identities=11% Similarity=0.101 Sum_probs=29.6
Q ss_pred hhHHHHHHHhcccCCCcEEEEEcCCCCC-ChHHHHHHHHHH
Q 041333 173 AGALREGMKRGYVKSCDFVVIFDADFQP-ESDFLTRTIPFL 212 (513)
Q Consensus 173 a~aln~gl~~a~~~~~d~I~~lDaD~~~-~pd~L~~l~~~~ 212 (513)
.++...++... ..|.++++.+|.-. +++.++++....
T Consensus 77 ~~g~~~~~~~~---~~~~vlv~~~D~P~i~~~~i~~L~~~~ 114 (188)
T d1e5ka_ 77 LAGMLSVMQQE---AGEWFLFCPCDTPYIPPDLAARLNHQR 114 (188)
T ss_dssp HHHHHHHHHHC---CSSEEEEEETTCTTCCTTHHHHHHHTC
T ss_pred hHHHHHHHHhc---ccceEEEeccCCCCCCHHHHHHHHHhc
Confidence 45566677777 89999999999654 889999988775
No 22
>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}
Probab=44.19 E-value=20 Score=30.94 Aligned_cols=96 Identities=11% Similarity=0.166 Sum_probs=47.3
Q ss_pred EEEeccCCh--HHHHHHHHHHHcCCCCCCeeEEEEE-eCCCchhHHHHHHHHHHHhhccCccEEEEEcCCC--C----CC
Q 041333 101 VQIPMFNER--EVYQLSIGAACGLSWPSDRLIIQVL-DDSTDLTIKDMVELECQRWASKGINIKYEVRDNR--K----GY 171 (513)
Q Consensus 101 IiIP~yne~--~~l~~~l~sl~~q~yp~~~i~IiV~-Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~--~----g~ 171 (513)
|+.. -|+. ..+..++.|+++.. |+..+.|+|. |+-+++..+.+ +. .....+..+..+..+.. . ..
T Consensus 3 Iv~~-~D~nY~~~~~~~i~SL~~~~-~~~~~~~~il~~~~~~~~~~~l-~~---~~~~~~~~i~~~~~~~~~~~~~~~~~ 76 (282)
T d1ga8a_ 3 IVFA-ADDNYAAYLCVAAKSVEAAH-PDTEIRFHVLDAGISEANRAAV-AA---NLRGGGGNIRFIDVNPEDFAGFPLNI 76 (282)
T ss_dssp EEEE-ECGGGHHHHHHHHHHHHHHC-TTSCCEEEEEESSCCHHHHHHH-HH---TSGGGTTTEEEEECCGGGGTTSCCCC
T ss_pred EEEE-CCHHHHHHHHHHHHHHHHHC-cCCCEEEEEEcCCCCHHHHHHH-HH---HHHHcCCeEEEEECCchHhccccccc
Confidence 4443 3554 67778899987642 3334444444 44444444433 22 22234567776653211 0 00
Q ss_pred Ch-hHHHH---HHHhcccCCCcEEEEEcCCCCCChH
Q 041333 172 KA-GALRE---GMKRGYVKSCDFVVIFDADFQPESD 203 (513)
Q Consensus 172 Ka-~aln~---gl~~a~~~~~d~I~~lDaD~~~~pd 203 (513)
+. ...+. .+.... ++.|-|+.+|+|+++-.|
T Consensus 77 ~~~s~~~y~Rl~l~~~l-p~~~kiiyLD~D~iv~~d 111 (282)
T d1ga8a_ 77 RHISITTYARLKLGEYI-ADCDKVLYLDIDVLVRDS 111 (282)
T ss_dssp TTCCGGGGGGGGHHHHC-CSCSCEEEECSSEEECSC
T ss_pred cccCHHHHHHHHHhhhC-CccceEEEecCCEEEecc
Confidence 10 00010 011111 367889999999888654
No 23
>d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]}
Probab=43.47 E-value=14 Score=31.96 Aligned_cols=89 Identities=15% Similarity=0.280 Sum_probs=49.5
Q ss_pred EEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHH
Q 041333 102 QIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMK 181 (513)
Q Consensus 102 iIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~ 181 (513)
++|..++...++.+++.+...... +++.| +... .. +.+.+ ..+.++.++..+...| .+.|.-.++.
T Consensus 28 ll~i~g~k~ll~~~i~rl~~~~~~-~~i~i-~~~~-~~---~~~~~-------~~~~~~~ii~E~~~~~-t~~a~~~~~~ 93 (268)
T d2cu2a2 28 FLPLFEGKTLLEATLERLAPLVPP-ERTLL-AVRR-DQ---EAVAR-------PYADGIRLLLEPLGRD-TAGAVLLGVA 93 (268)
T ss_dssp GCBCGGGCBHHHHHHHHHTTTSCG-GGEEE-EEEG-GG---HHHHG-------GGCSSSEEEEESSCCH-HHHHHHHHHH
T ss_pred eeecCCCCCHHHHHHHHhhCcCCc-cchhh-hhhH-HH---HHHhh-------hhccccceeeeeecCC-cccchhhHHH
Confidence 567777777888999887654332 33333 3322 11 11221 1233455555555544 4555555544
Q ss_pred hcccCCCcEEEEEcCCCCCChHH
Q 041333 182 RGYVKSCDFVVIFDADFQPESDF 204 (513)
Q Consensus 182 ~a~~~~~d~I~~lDaD~~~~pd~ 204 (513)
.......|.++++-+|.....+.
T Consensus 94 ~~~~~~~~~vlvl~~D~~~~~~~ 116 (268)
T d2cu2a2 94 EALKEGAERLLVLPADHYVGDDE 116 (268)
T ss_dssp HHHHHTCSEEEEEESSCEESCHH
T ss_pred HHhccCCceeEEEecchhhcccH
Confidence 33223678899999998886553
No 24
>d1vh1a_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KdsB [TaxId: 562]}
Probab=43.46 E-value=81 Score=25.77 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=52.0
Q ss_pred ChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccCC
Q 041333 108 EREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVKS 187 (513)
Q Consensus 108 e~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~~ 187 (513)
....+..+++.+.+... ++++ |.-| |+...... ++ .+..+.+.+.+...| ......+++......
T Consensus 25 GkpLI~~~i~~a~~s~i--~~ii--VsTd--~~~i~~~~----~~---~g~~v~~~~~~~~~~--~~~~~~~~~~~~~~~ 89 (246)
T d1vh1a_ 25 GKPMIVHVLERARESGA--ERII--VATD--HEDVARAV----EA---AGGEVCMTRADHQSG--TERLAEVVEKCAFSD 89 (246)
T ss_dssp TEEHHHHHHHHHHHTTC--SEEE--EEES--CHHHHHHH----HH---TTCEEEECC-----C--HHHHHHHHHHTTCCT
T ss_pred CccHHHHHHHHHHHcCC--CcEE--EEec--Cccccchh----hc---ccccceeeccccccc--chHHHHHHHhhcccc
Confidence 33578889998887642 4433 4433 22222222 22 244554433222222 233344444443347
Q ss_pred CcEEEEEcCCCCC-ChHHHHHHHHHHhcCC
Q 041333 188 CDFVVIFDADFQP-ESDFLTRTIPFLVHNP 216 (513)
Q Consensus 188 ~d~I~~lDaD~~~-~pd~L~~l~~~~~~~~ 216 (513)
.+.++.+.+|... +|+.+..++..+..++
T Consensus 90 ~~~i~~~~~d~pl~~~~~i~~~i~~~~~~~ 119 (246)
T d1vh1a_ 90 DTVIVNVQGDEPMIPATIIRQVADNLAQRQ 119 (246)
T ss_dssp TCEEEECCTTCTTCCHHHHHHHHHHHHHSS
T ss_pred cceeeeeccccccchhhHHHHHhhhhcccc
Confidence 7899999999765 8899999988875443
No 25
>d1vica_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Haemophilus influenzae [TaxId: 727]}
Probab=43.04 E-value=83 Score=25.77 Aligned_cols=93 Identities=14% Similarity=0.129 Sum_probs=50.5
Q ss_pred ChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHHhcccCC
Q 041333 108 EREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMKRGYVKS 187 (513)
Q Consensus 108 e~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~~a~~~~ 187 (513)
....+..+++.+.+... ++++ |+-| |+...... ++ .+..+.+. +++...+ ......+.+.....+
T Consensus 25 GkpLI~~~i~~a~~s~i--~~Ii--VsTd--~~~i~~~~----~~---~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~ 89 (255)
T d1vica_ 25 GKPMIQHVFEKALQSGA--SRVI--IATD--NENVADVA----KS---FGAEVCMT-SVNHNSG-TERLAEVVEKLAIPD 89 (255)
T ss_dssp TEEHHHHHHHHHHHTTC--SEEE--EEES--CHHHHHHH----HH---TTCEEEEC-CCSSCCH-HHHHHHHHHHTTCCT
T ss_pred CcCHHHHHHHHHHHCCC--CeEE--EEcC--Ccccchhh----hh---hcccccee-eeccCCc-chhhHHHHHHhhccC
Confidence 33578889998887652 4543 4433 22222222 22 23444333 2322222 223333343333357
Q ss_pred CcEEEEEcCCCCC-ChHHHHHHHHHHhcC
Q 041333 188 CDFVVIFDADFQP-ESDFLTRTIPFLVHN 215 (513)
Q Consensus 188 ~d~I~~lDaD~~~-~pd~L~~l~~~~~~~ 215 (513)
.++|+.+.+|... ++..+..+...+..+
T Consensus 90 ~~~iv~~~~d~p~~~~~~i~~~i~~~~~~ 118 (255)
T d1vica_ 90 NEIIVNIQGDEPLIPPVIVRQVADNLAKF 118 (255)
T ss_dssp TCEEEECCTTCTTCCHHHHHHHHHHHHHH
T ss_pred CceEEEEecchhhhhhhhhhhhhhhcccc
Confidence 8899999999765 778888888776433
No 26
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=41.29 E-value=43 Score=28.25 Aligned_cols=18 Identities=22% Similarity=0.182 Sum_probs=15.0
Q ss_pred CCCcEEEEEcCCCCCChH
Q 041333 186 KSCDFVVIFDADFQPESD 203 (513)
Q Consensus 186 ~~~d~I~~lDaD~~~~pd 203 (513)
.+.|-|+.+|+|+++-.|
T Consensus 93 ~~ydkvlYLDaD~lv~~~ 110 (263)
T d1ll2a_ 93 TQYSKCVFMDADTLVLAN 110 (263)
T ss_dssp TTCSEEEEECTTEEECSC
T ss_pred cccceEEEeCCCEEEecC
Confidence 478999999999888544
No 27
>d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]}
Probab=41.21 E-value=83 Score=25.28 Aligned_cols=103 Identities=13% Similarity=0.139 Sum_probs=58.0
Q ss_pred EEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHHHHhhccCccEEEEEcCCCCCCChhHHHHHHH
Q 041333 102 QIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELECQRWASKGINIKYEVRDNRKGYKAGALREGMK 181 (513)
Q Consensus 102 iIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~~~~~~~~~~v~~~~~~~~~g~Ka~aln~gl~ 181 (513)
++|. +....+..+++++.+.... +++ ++|.+.......+. .......+....... + ...+.-.|..
T Consensus 25 L~~i-~gkplI~~~i~~~~~~~~i-~~I-ivv~~~~~~~~~~~--------~~~~~~~v~~~~~~~--~-~~~sv~~~~~ 90 (225)
T d1i52a_ 25 YLSI-GNQTILEHSVHALLAHPRV-KRV-VIAISPGDSRFAQL--------PLANHPQITVVDGGD--E-RADSVLAGLK 90 (225)
T ss_dssp GSEE-TTEEHHHHHHHHHHTSTTE-EEE-EEEECTTCCSGGGS--------GGGGCTTEEEEECCS--S-HHHHHHHHHH
T ss_pred eeEE-CCEEHHHHHHHHHHhCccc-ccc-ccccchhhhhhhhh--------hhccccccccccCCc--c-hhHHHHhhhc
Confidence 4455 4446888899988764322 233 33444432222111 112234454443322 1 2445555665
Q ss_pred hcccCCCcEEEEEcCCC-CCChHHHHHHHHHHhcCCCeeE
Q 041333 182 RGYVKSCDFVVIFDADF-QPESDFLTRTIPFLVHNPQLAL 220 (513)
Q Consensus 182 ~a~~~~~d~I~~lDaD~-~~~pd~L~~l~~~~~~~~~v~~ 220 (513)
.. .+.++|++.|+|. ..+++.+.++...+..+....+
T Consensus 91 ~~--~~~~~vl~~~~~~p~i~~~~~~~~~~~~~~~~~~~v 128 (225)
T d1i52a_ 91 AA--GDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGI 128 (225)
T ss_dssp TS--TTCSEEEECCTTCTTCCHHHHHHHHGGGGTCSSCEE
T ss_pred cc--CccceeeeeccCCCCCCHHHHHHHHhhhhhcccccc
Confidence 55 3789999999996 4588999999888855544433
No 28
>d2dpwa1 c.68.1.19 (A:1-231) Uncharacterized protein TTHA0179 {Thermus thermophilus [TaxId: 274]}
Probab=32.13 E-value=50 Score=27.04 Aligned_cols=37 Identities=8% Similarity=0.076 Sum_probs=30.5
Q ss_pred ChhHHHHHHHhcccCCCcEEEEEcCCC-CCChHHHHHHHHHH
Q 041333 172 KAGALREGMKRGYVKSCDFVVIFDADF-QPESDFLTRTIPFL 212 (513)
Q Consensus 172 Ka~aln~gl~~a~~~~~d~I~~lDaD~-~~~pd~L~~l~~~~ 212 (513)
-..++..|++.. . |.++++++|. .++++.+++++..+
T Consensus 72 ~~~~v~~al~~~---~-~~~lv~~~D~P~i~~~~i~~l~~~~ 109 (231)
T d2dpwa1 72 LLENLEQALEHV---E-GRVLVATGDIPHLTEEAVRFVLDKA 109 (231)
T ss_dssp HHHHHHHHHHTC---C-SEEEEEETTCTTCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh---c-CceEEeeCCCccCCHHHHHHHHHHh
Confidence 567788888887 4 6788899997 55999999999887
No 29
>d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=26.55 E-value=1.6e+02 Score=24.72 Aligned_cols=117 Identities=7% Similarity=0.066 Sum_probs=56.3
Q ss_pred EEeccCChHHHHHHHHHHHcCCCCCCeeEEEEEeCCCchhHHHHHHHHH---HHhhccCccEEEEEcCCCC--C---CCh
Q 041333 102 QIPMFNEREVYQLSIGAACGLSWPSDRLIIQVLDDSTDLTIKDMVELEC---QRWASKGINIKYEVRDNRK--G---YKA 173 (513)
Q Consensus 102 iIP~yne~~~l~~~l~sl~~q~yp~~~i~IiV~Dds~D~t~~~l~~~~~---~~~~~~~~~v~~~~~~~~~--g---~Ka 173 (513)
++|.-+....+..+|+.+.+... .++.| |.....+...+.+.+... ..+...+....+....... + +-+
T Consensus 36 llpv~g~~plI~~~l~~l~~~gi--~~I~I-v~~~~~~~i~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 112 (307)
T d1yp2a2 36 AVPLGANYRLIDIPVSNCLNSNI--SKIYV-LTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPDWFQGTA 112 (307)
T ss_dssp GCEETTTEETTHHHHHHHHHTTC--CEEEE-EESCCCHHHHHHHHHHCC--------CCEEEEEESCSSTTSCCCCCSHH
T ss_pred eEEECCCCCHHHHHHHHHHHcCC--CEEEE-Eeccccccchhhhhcccccccccccccccceeeceeeeccccccccchh
Confidence 34554444678888888887653 34443 443333333332322110 1111122223332222111 1 245
Q ss_pred hHHHHHHHhcccCCCcEEEEEcCCCCCChHHHHHHHHHHhcCCCeeEE
Q 041333 174 GALREGMKRGYVKSCDFVVIFDADFQPESDFLTRTIPFLVHNPQLALV 221 (513)
Q Consensus 174 ~aln~gl~~a~~~~~d~I~~lDaD~~~~pd~L~~l~~~~~~~~~v~~V 221 (513)
+++-.+.........+.++++++|.....|....+..+-..+..+.++
T Consensus 113 ~ai~~~~~~i~~~~~~~~iv~~~D~~~~~d~~~~~~~~~~~~~~~~~~ 160 (307)
T d1yp2a2 113 DAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVA 160 (307)
T ss_dssp HHHHHTHHHHTTSCCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHhHHhhhccccceEEEecCcceeccchhhhhhhhhhccccceEE
Confidence 555555554422355778899999988877654444444344444443
Done!