BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>041336
MEATTSVIIHSRTIPFGFTLTSSPKISFRHFNKRLQLQNQLPNHCFHSRLSPNLIKTQSS
LIFSPKRSRTHFLSPVKCSLSDSASPDSSQKTLLEPFKNLSVDKIKTAVLKLTPFDIIKW
SSILSIAIAATKWTVNLVLNPFFWMYFSWTWLFWPWYVAIALGVYGLYCFRKQSLGEASI
FEQLAIVTSLFTWLTLVPPAVFNGYLEGWPFVFFFVYHYFFFFNVSVRKRLYGDYYAREH
DPRWDINTPTWCRILFTIGVMAGHWLVAFEGPELHRIPGGLNNVGMWILIVLTLLMQYNS
TLYLAKYSEKVVVPTAVVQFGPYRWVRHPIYASTMLLFVTYCIALRAPLSLLFLVAVCLV
YYEQKAKLEEALMVETFGERYLEYASKVRHKFIPFVY

High Scoring Gene Products

Symbol, full name Information P value
AT5G59500 protein from Arabidopsis thaliana 1.8e-126
STE14
Farnesyl cysteine-carboxyl methyltransferase
gene from Saccharomyces cerevisiae 3.5e-06
RVBD_2437
Uncharacterized protein
protein from Mycobacterium tuberculosis H37Rv 6.3e-05
STE14A
AT5G23320
protein from Arabidopsis thaliana 0.00030

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041336
        (397 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2148373 - symbol:AT5G59500 species:3702 "Arabi...  1242  1.8e-126  1
SGD|S000002818 - symbol:STE14 "Farnesyl cysteine-carboxyl...   131  3.5e-06   1
UNIPROTKB|P71912 - symbol:Rv2437 "Uncharacterized protein...   103  6.3e-05   1
TAIR|locus:2166963 - symbol:STE14A "homolog of yeast STE1...   112  0.00030   1


>TAIR|locus:2148373 [details] [associations]
            symbol:AT5G59500 species:3702 "Arabidopsis thaliana"
            [GO:0004671 "protein C-terminal S-isoprenylcysteine carboxyl
            O-methyltransferase activity" evidence=IEA] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0006481 "C-terminal
            protein methylation" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] InterPro:IPR007318 EMBL:CP002688
            EMBL:AB025604 GO:GO:0008168 Pfam:PF04191 EMBL:BT002357
            IPI:IPI00539755 RefSeq:NP_200758.1 UniGene:At.29222
            ProteinModelPortal:Q9LTI0 SMR:Q9LTI0 PRIDE:Q9LTI0
            EnsemblPlants:AT5G59500.1 GeneID:836069 KEGG:ath:AT5G59500
            TAIR:At5g59500 InParanoid:Q9LTI0 OMA:MVGHWLA PhylomeDB:Q9LTI0
            ProtClustDB:CLSN2686466 Genevestigator:Q9LTI0 Uniprot:Q9LTI0
        Length = 396

 Score = 1242 (442.3 bits), Expect = 1.8e-126, P = 1.8e-126
 Identities = 239/399 (59%), Positives = 283/399 (70%)

Query:     6 SVIIHSRTIPFGFTLTSSPKISFRHFNKRLQLQNQLPNHCFHSRLSPNL-----IKTQSS 60
             +V++ S+ +P   +L  + K SFRH NK L+  N L      SR +P L     IK+ S 
Sbjct:     3 AVLLCSKLVPRAASLEGNQKFSFRHLNKHLKC-NSLRAD---SRDTPLLRGFEAIKSPSI 58

Query:    61 LIFSPKRSRTHFLSPVKCXXXXXXXXXXXQKTLLEPFKNLSVDKI--KTAVLKLTPFDII 118
                +P   R     P +C               L  F+  S   +  K   LK+ P D++
Sbjct:    59 WSCAPFPVRKGSWVPPRCSISSSTVSDS-DNPFLSQFRTFSFGSMVKKVRELKVKPMDVV 117

Query:   119 KWSSILSIAIAATKWTVNLVLNPFFWMYFSWTWLFWPWYVAIALGVYGLYCFRKQSLGEA 178
             K + +LSI   A K T+ LVL+PFFWMYFSWTWLFWPW++A+ L  YG+YCFRK  LGEA
Sbjct:   118 KLTLLLSILTVAAKKTLTLVLDPFFWMYFSWTWLFWPWFIAVGLAGYGIYCFRKHWLGEA 177

Query:   179 SIFEQLAIVTSLFTWLTLVPPAVFNGYLEGWPXXXXXXXXXXXXXNVSVRKRLYGDYYAR 238
             + FEQL IVTS+FTWLTLVPPA FNGYLEGWP             NVSVRKRLYGD+YAR
Sbjct:   178 NAFEQLGIVTSVFTWLTLVPPAYFNGYLEGWPYVFFLAYHYFFFFNVSVRKRLYGDFYAR 237

Query:   239 EHDPRWDINTPTWCRILFTIGVMAGHWLVAFEGPELHRIPGGLNNVGMWILIVLTLLMQY 298
              HDP+WD+NTP W RILF +G+M GHWL AFEGPELHR+PGG  NVG+WILIV+T+LM Y
Sbjct:   238 THDPKWDVNTPLWSRILFGVGIMVGHWLAAFEGPELHRLPGGWANVGIWILIVITMLMHY 297

Query:   299 NSTLYLAKYSEKVVVPTAVVQFGPYRWVRHPIYASTMLLFVTYCIALRAPLSLLFLVAVC 358
             +STLYLA+YSEKVVVPTAVVQFGPYRWVRHPIYASTMLLF  YC ALRAPLSLLFL+AVC
Sbjct:   298 DSTLYLARYSEKVVVPTAVVQFGPYRWVRHPIYASTMLLFAAYCTALRAPLSLLFLLAVC 357

Query:   359 LVYYEQKAKLEEALMVETFGERYLEYASKVRHKFIPFVY 397
             LVYY +KAK+EE LMVE+FG+ Y +YA KVRHKFIPFVY
Sbjct:   358 LVYYNKKAKMEEELMVESFGQSYSDYADKVRHKFIPFVY 396


>SGD|S000002818 [details] [associations]
            symbol:STE14 "Farnesyl cysteine-carboxyl methyltransferase"
            species:4932 "Saccharomyces cerevisiae" [GO:0019236 "response to
            pheromone" evidence=IEA] [GO:0004671 "protein C-terminal
            S-isoprenylcysteine carboxyl O-methyltransferase activity"
            evidence=IEA;IDA;IMP] [GO:0016021 "integral to membrane"
            evidence=ISM;IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0008168
            "methyltransferase activity" evidence=IEA] [GO:0005789 "endoplasmic
            reticulum membrane" evidence=IDA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] [GO:0007323 "peptide pheromone maturation"
            evidence=IMP] [GO:0006481 "C-terminal protein methylation"
            evidence=IEA;IMP] [GO:0032259 "methylation" evidence=IEA]
            [GO:0005637 "nuclear inner membrane" evidence=IMP] [GO:0016740
            "transferase activity" evidence=IEA] InterPro:IPR007269
            InterPro:IPR025770 Pfam:PF04140 SGD:S000002818 EMBL:U33007
            GO:GO:0016021 GO:GO:0005789 EMBL:BK006938 GO:GO:0005637
            GO:GO:0007323 GO:GO:0019236 EMBL:L07952 eggNOG:COG2020
            HOGENOM:HOG000213961 KO:K00587 GO:GO:0004671 OMA:AYALTVW
            OrthoDB:EOG4NS6N5 EMBL:L15442 PIR:S37604 RefSeq:NP_010698.1
            ProteinModelPortal:P32584 SMR:P32584 DIP:DIP-2678N IntAct:P32584
            STRING:P32584 PaxDb:P32584 EnsemblFungi:YDR410C GeneID:852019
            KEGG:sce:YDR410C CYGD:YDR410c GeneTree:ENSGT00390000017394
            BindingDB:P32584 ChEMBL:CHEMBL4385 NextBio:970234
            Genevestigator:P32584 GermOnline:YDR410C Uniprot:P32584
        Length = 239

 Score = 131 (51.2 bits), Expect = 3.5e-06, P = 3.5e-06
 Identities = 35/114 (30%), Positives = 57/114 (50%)

Query:   291 VLTLLMQYNSTL--YLAKYSEKVVVPT------AVVQFGPYRWVRHPIYASTMLLFVTYC 342
             +L +L QY  T+  + A +S   +V T       +V+ G Y W RHP Y       +   
Sbjct:   127 LLVILGQYTRTIAMHTAGHSFSHIVKTKKESDHVLVKTGVYSWSRHPSYLGFFWWAIGTQ 186

Query:   343 IALRAPLSLLFLVAVCLVYYEQKAKLEEALMVETFGERYLEYASKVRHKFIPFV 396
             + L  PLSL+  + V   ++  + ++EE  ++E F   Y+EY +KV    IPF+
Sbjct:   187 LLLLNPLSLVIFIFVLWKFFSDRIRVEEKYLIEFFSAEYIEYKNKVGVG-IPFI 239


>UNIPROTKB|P71912 [details] [associations]
            symbol:Rv2437 "Uncharacterized protein" species:83332
            "Mycobacterium tuberculosis H37Rv" [GO:0040007 "growth"
            evidence=IMP] InterPro:IPR007318 GO:GO:0040007
            GenomeReviews:AL123456_GR EMBL:BX842579 Pfam:PF04191 EMBL:CP003248
            PIR:C70680 RefSeq:NP_216953.1 RefSeq:YP_006515873.1
            ProteinModelPortal:P71912 SMR:P71912
            EnsemblBacteria:EBMYCT00000002582 GeneID:13319146 GeneID:885906
            KEGG:mtu:Rv2437 KEGG:mtv:RVBD_2437 PATRIC:18154017
            TubercuList:Rv2437 HOGENOM:HOG000138432 OMA:DPSETTT
            ProtClustDB:CLSK791852 Uniprot:P71912
        Length = 139

 Score = 103 (41.3 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 30/87 (34%), Positives = 45/87 (51%)

Query:   315 TAVVQFGPYRWVRHPIYASTM-----LLFVTYCIALRAPLSLLFLVAVCLVYYEQKAKLE 369
             T +V+ GP++WVRHPIY + M     LL VT  +   A    + LVA   V+     ++E
Sbjct:    55 TTLVRTGPFKWVRHPIYTAMMAFGLGLLLVTPNLVALA--GFILLVATLEVHVR---RVE 109

Query:   370 EALMVETFGERYLEYASKVRHKFIPFV 396
             E  ++ T    Y  Y + V  +F+P V
Sbjct:   110 EPYLLRTHSAVYRGYTASVG-RFVPGV 135


>TAIR|locus:2166963 [details] [associations]
            symbol:STE14A "homolog of yeast STE14 A" species:3702
            "Arabidopsis thaliana" [GO:0004671 "protein C-terminal
            S-isoprenylcysteine carboxyl O-methyltransferase activity"
            evidence=IEA;IGI;ISS;IDA] [GO:0006481 "C-terminal protein
            methylation" evidence=IEA;ISS;IMP;IDA] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0009788 "negative regulation of
            abscisic acid mediated signaling pathway" evidence=NAS] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] [GO:0009908 "flower
            development" evidence=IMP] [GO:0010340
            "carboxyl-O-methyltransferase activity" evidence=IMP] [GO:0048367
            "shoot system development" evidence=IMP] InterPro:IPR007269
            InterPro:IPR025770 Pfam:PF04140 GO:GO:0005783 GO:GO:0016021
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005789 GO:GO:0009788
            GO:GO:0009908 GO:GO:0048367 EMBL:AB007648 EMBL:DQ446977
            EMBL:DQ653301 IPI:IPI00535384 RefSeq:NP_197723.1 UniGene:At.54958
            STRING:Q9FMW9 EnsemblPlants:AT5G23320.1 GeneID:832396
            KEGG:ath:AT5G23320 TAIR:At5g23320 eggNOG:COG2020
            HOGENOM:HOG000213961 InParanoid:Q9FMW9 KO:K00587 OMA:CGFLIWS
            PhylomeDB:Q9FMW9 ProtClustDB:CLSN2686135
            BioCyc:MetaCyc:AT5G23320-MONOMER SABIO-RK:Q9FMW9
            Genevestigator:Q9FMW9 GO:GO:0004671 Uniprot:Q9FMW9
        Length = 197

 Score = 112 (44.5 bits), Expect = 0.00030, P = 0.00030
 Identities = 27/80 (33%), Positives = 41/80 (51%)

Query:   317 VVQFGPYRWVRHPIYASTMLLFVTYCIALRAPLSLLFLVAVCLVYYEQKAKLEEALMVET 376
             +V  G YR +RHP Y   ++  V   + L  P+S +    V   ++ Q+   EE  + + 
Sbjct:   118 LVTHGVYRLMRHPSYCGFLIWSVGTQVMLCNPVSAVAFAVVVWRFFAQRIPYEEYFLNQF 177

Query:   377 FGERYLEYASKVRHKFIPFV 396
             FG +YLEYA  V    +PFV
Sbjct:   178 FGVQYLEYAESVASG-VPFV 196


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.140   0.458    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      397       373   0.00087  117 3  11 22  0.44    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  624 (66 KB)
  Total size of DFA:  273 KB (2141 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.74u 0.12s 27.86t   Elapsed:  00:00:02
  Total cpu time:  27.74u 0.12s 27.86t   Elapsed:  00:00:02
  Start:  Fri May 10 08:20:13 2013   End:  Fri May 10 08:20:15 2013

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