BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041336
(397 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7XSR9|ICMT_ORYSJ Probable protein-S-isoprenylcysteine O-methyltransferase OS=Oryza
sativa subsp. japonica GN=ICMT PE=2 SV=2
Length = 191
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 317 VVQFGPYRWVRHPIYASTMLLFVTYCIALRAPLSLLFLVAVCLVYYEQKAKLEEALMVET 376
++ G YR +RHP Y+ ++ V + L PLS + V ++ ++ EE + +
Sbjct: 112 LITHGVYRLMRHPGYSGFLIWAVGTQVMLCNPLSTVAFTLVLWRFFSKRIPYEEFFLRQF 171
Query: 377 FGERYLEYASKVRHKFIPFV 396
FG Y EYA KV H +PF+
Sbjct: 172 FGREYEEYAQKV-HSGLPFI 190
>sp|A2XX73|ICMT_ORYSI Probable protein-S-isoprenylcysteine O-methyltransferase OS=Oryza
sativa subsp. indica GN=ICMT PE=3 SV=2
Length = 191
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 317 VVQFGPYRWVRHPIYASTMLLFVTYCIALRAPLSLLFLVAVCLVYYEQKAKLEEALMVET 376
++ G YR +RHP Y+ ++ V + L PLS + V ++ ++ EE + +
Sbjct: 112 LITHGVYRLMRHPGYSGFLIWAVGTQVMLCNPLSTVAFTLVLWRFFSKRIPYEEFFLRQF 171
Query: 377 FGERYLEYASKVRHKFIPFV 396
FG Y EYA KV H +PF+
Sbjct: 172 FGREYEEYAQKV-HSGLPFI 190
>sp|O12947|ICMT_XENLA Protein-S-isoprenylcysteine O-methyltransferase OS=Xenopus laevis
GN=icmt PE=2 SV=1
Length = 288
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 317 VVQFGPYRWVRHPIYASTMLLFVTYCIALRAPLSLLFLVAVCLVYYEQKAKLEEALMVET 376
+V G Y W RHP Y + + L PL L+ ++ ++ + EE ++
Sbjct: 203 LVTSGVYSWFRHPSYVGWFYWSIGTQVLLCNPLCLVGYTLASWRFFSERIEEEEFSLIHF 262
Query: 377 FGERYLEYASKVRHKFIPFV 396
FGE YLEY KV +PF+
Sbjct: 263 FGENYLEYKKKVPTG-LPFI 281
>sp|Q93W54|ICMTB_ARATH Protein-S-isoprenylcysteine O-methyltransferase B OS=Arabidopsis
thaliana GN=ICMTB PE=1 SV=1
Length = 197
Score = 40.0 bits (92), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 321 GPYRWVRHPIYASTMLLFVTYCIALRAPLSLLFLVAVCLVYYEQKAKLEEALMVETFGER 380
G Y+ +RHP Y+ ++ V + L P+S + V ++ ++ EE + + FG +
Sbjct: 122 GVYQIMRHPSYSGFLIWSVGTQVMLCNPISAIAFAVVVWRFFAERIPYEEHYLKQFFGRQ 181
Query: 381 YLEYASKVRHKFIPFV 396
Y+EYA +V +PFV
Sbjct: 182 YVEYAQRVPSG-VPFV 196
>sp|Q558K8|ICMT_DICDI Protein-S-isoprenylcysteine O-methyltransferase OS=Dictyostelium
discoideum GN=icmt-1 PE=2 SV=2
Length = 237
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%)
Query: 290 IVLTLLMQYNSTLYLAKYSEKVVVPTAVVQFGPYRWVRHPIYASTMLLFVTYCIALRAPL 349
IV ++ M + + E+ +V G Y+++RHP Y + V+ + L P+
Sbjct: 131 IVRSVAMDTAGSNFTHLVQEEKRDDHVLVTNGIYQYMRHPSYFGWFVWSVSTQVILMNPI 190
Query: 350 SLLFLVAVCLVYYEQKAKLEEALMVETFGERYLEYASKV 388
S++ ++ Q+ + EE +++ FG+ Y +Y V
Sbjct: 191 SIIGFGWASWSFFSQRIENEEDYLIQFFGKSYKDYKKSV 229
>sp|Q9WVM4|ICMT_RAT Protein-S-isoprenylcysteine O-methyltransferase (Fragment)
OS=Rattus norvegicus GN=Icmt PE=1 SV=1
Length = 232
Score = 38.9 bits (89), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 308 SEKVVVPTAVVQFGPYRWVRHPIYASTMLLFVTYCIALRAPLSLLFLVAVCLVYYEQKAK 367
SEK T V G Y W RHP Y + + L P+ + ++ + +
Sbjct: 139 SEKSDTHTLVTS-GVYAWCRHPSYVGWFYWSIGTQVMLCNPICGVVYALTVWRFFRDRTE 197
Query: 368 LEEALMVETFGERYLEYASKVRHKFIPFV 396
EE ++ FGE YL+Y +V +PF+
Sbjct: 198 EEEISLIHFFGEEYLDYKKRVPTG-LPFI 225
>sp|Q9FMW9|ICMTA_ARATH Protein-S-isoprenylcysteine O-methyltransferase A OS=Arabidopsis
thaliana GN=ICMTA PE=1 SV=1
Length = 197
Score = 38.9 bits (89), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 316 AVVQFGPYRWVRHPIYASTMLLFVTYCIALRAPLSLLFLVAVCLVYYEQKAKLEEALMVE 375
+V G YR +RHP Y ++ V + L P+S + V ++ Q+ EE + +
Sbjct: 117 GLVTHGVYRLMRHPSYCGFLIWSVGTQVMLCNPVSAVAFAVVVWRFFAQRIPYEEYFLNQ 176
Query: 376 TFGERYLEYASKVRHKFIPFV 396
FG +YLEYA V +PFV
Sbjct: 177 FFGVQYLEYAESVASG-VPFV 196
>sp|P32584|STE14_YEAST Protein-S-isoprenylcysteine O-methyltransferase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=STE14 PE=1
SV=1
Length = 239
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 291 VLTLLMQYNST--LYLAKYSEKVVVPT------AVVQFGPYRWVRHPIYASTMLLFVTYC 342
+L +L QY T ++ A +S +V T +V+ G Y W RHP Y +
Sbjct: 127 LLVILGQYTRTIAMHTAGHSFSHIVKTKKESDHVLVKTGVYSWSRHPSYLGFFWWAIGTQ 186
Query: 343 IALRAPLSLLFLVAVCLVYYEQKAKLEEALMVETFGERYLEYASKVRHKFIPFV 396
+ L PLSL+ + V ++ + ++EE ++E F Y+EY +KV IPF+
Sbjct: 187 LLLLNPLSLVIFIFVLWKFFSDRIRVEEKYLIEFFSAEYIEYKNKVGVG-IPFI 239
>sp|Q9EQK7|ICMT_MOUSE Protein-S-isoprenylcysteine O-methyltransferase OS=Mus musculus
GN=Icmt PE=2 SV=2
Length = 283
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 308 SEKVVVPTAVVQFGPYRWVRHPIYASTMLLFVTYCIALRAPLSLLFLVAVCLVYYEQKAK 367
SEK T V G Y W RHP Y + + L P+ + ++ + +
Sbjct: 190 SEKSDTHTLVTS-GVYAWCRHPSYVGWFYWSIGTQVMLCNPICGVVYALTVWRFFRDRTE 248
Query: 368 LEEALMVETFGERYLEYASKVRHKFIPFV 396
EE ++ FGE YL+Y +V +PF+
Sbjct: 249 EEEISLIHFFGEEYLDYKKRVPTG-LPFI 276
>sp|P87014|MAM4_SCHPO Protein-S-isoprenylcysteine O-methyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mam4 PE=3 SV=1
Length = 236
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%)
Query: 317 VVQFGPYRWVRHPIYASTMLLFVTYCIALRAPLSLLFLVAVCLVYYEQKAKLEEALMVET 376
+V G Y +VRHP Y + + + L +S L V ++ Q+ EEA +V
Sbjct: 157 LVTDGIYAYVRHPSYVGFFIWALGTQMLLGNFVSTLLFSLVLWKFFSQRITTEEAYLVSF 216
Query: 377 FGERYLEYASKV 388
FG+ Y +Y KV
Sbjct: 217 FGDSYEQYRKKV 228
>sp|O60725|ICMT_HUMAN Protein-S-isoprenylcysteine O-methyltransferase OS=Homo sapiens
GN=ICMT PE=1 SV=1
Length = 284
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 317 VVQFGPYRWVRHPIYASTMLLFVTYCIALRAPLSLLFLVAVCLVYYEQKAKLEEALMVET 376
+V G Y W RHP Y + + L P+ + ++ + + EE ++
Sbjct: 199 LVTSGVYAWFRHPSYVGWFYWSIGTQVMLCNPICGVSYALTVWRFFRDRTEEEEISLIHF 258
Query: 377 FGERYLEYASKVRHKFIPFV 396
FGE YLEY +V +PF+
Sbjct: 259 FGEEYLEYKKRVPTG-LPFI 277
>sp|Q37545|COX2_LUMTE Cytochrome c oxidase subunit 2 OS=Lumbricus terrestris GN=COII PE=3
SV=1
Length = 228
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Query: 214 FFVYHYFFFFNVSVR-------KRLYGDYYAREHDPRWDINTPTWCRILFTIGVMAGHWL 266
++ Y Y F NV + L GDY E D R + R+L T + W
Sbjct: 105 YWSYEYTDFLNVEMDSYMLPTSDLLPGDYRLLEVDNRMVVPMQLEIRMLITAADVIHSWT 164
Query: 267 VAFEGPELHRIPGGLNNVG 285
V G ++ +PG LN +G
Sbjct: 165 VPALGVKVDAVPGRLNQIG 183
>sp|P29940|YCB7_PSEDE Uncharacterized protein in cobO 3'region OS=Pseudomonas
denitrificans PE=3 SV=1
Length = 197
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 20/130 (15%)
Query: 268 AFEGPELHRIPGGLNNVGMWILIVLTLLMQYNSTLYLAKYSEKVVVP----TAVVQFGPY 323
A + P LH + L +G LT+L Q+ ++S K+ +P +V G Y
Sbjct: 79 ALDTPILHAVGLALMTLGGG----LTMLSQWA-----MRHSWKIGIPEKQDAPLVTSGLY 129
Query: 324 RWVRHPIYASTMLLFVTYCIALRAPLSLLFLVAVCL---VYYEQKAKLEEALMVETFGER 380
+ R+PIY + + +A+ +S VA+ L + + ++EE + + FG+
Sbjct: 130 AFSRNPIYVGMVTALIGTVMAVPNVIS----VALALSAWISISYQIRMEETHLAKVFGDA 185
Query: 381 YLEYASKVRH 390
Y Y +VR
Sbjct: 186 YGAYCRRVRR 195
>sp|Q8I7T3|SADA_DICDI Substrate-adhesion molecule OS=Dictyostelium discoideum GN=sadA
PE=2 SV=1
Length = 952
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 336 LLFVTYCIALRAPLSLLFLVAVCLVYYEQKAKLEEALMVETFGERYLEYASKVRHKFIPF 395
++FV Y I L P+++ FL+AV +A+L + FG Y+ Y K H+F+ F
Sbjct: 754 IIFVLYGIGL--PIAIWFLLAV------PEARLHNPTFKQRFGCLYVHYKPKTDHRFVVF 805
Query: 396 VY 397
++
Sbjct: 806 MF 807
>sp|P32462|ERG24_YEAST Delta(14)-sterol reductase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ERG24 PE=1 SV=1
Length = 438
Score = 32.0 bits (71), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 327 RHPIYASTMLLFVTYCIA--LRAPLSLLFLV--AVCLVYYEQKAKLEEALMVETFGERYL 382
+H Y L+ +++C+A + PL+ + + A L++ +Q+ + + L +GE +
Sbjct: 367 QHINYFGDWLISLSWCLATWFQTPLTYYYSLYFATLLLHRQQRDEHKCRL---KYGENWE 423
Query: 383 EYASKVRHKFIPFVY 397
EY KV +K IP+VY
Sbjct: 424 EYERKVPYKIIPYVY 438
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.140 0.459
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 144,115,327
Number of Sequences: 539616
Number of extensions: 5815021
Number of successful extensions: 16092
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 16080
Number of HSP's gapped (non-prelim): 20
length of query: 397
length of database: 191,569,459
effective HSP length: 120
effective length of query: 277
effective length of database: 126,815,539
effective search space: 35127904303
effective search space used: 35127904303
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)