Query 041338
Match_columns 269
No_of_seqs 208 out of 1387
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 06:06:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041338.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041338hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00343 triose or hexose phos 100.0 9.4E-29 2E-33 232.4 22.3 173 96-268 46-220 (350)
2 TIGR00817 tpt Tpt phosphate/ph 99.9 6.1E-26 1.3E-30 208.1 22.2 168 99-266 2-169 (302)
3 KOG1441 Glucose-6-phosphate/ph 99.9 7.6E-28 1.6E-32 222.6 8.8 175 94-268 12-189 (316)
4 KOG1443 Predicted integral mem 99.8 6.5E-19 1.4E-23 160.1 11.9 177 93-269 10-191 (349)
5 KOG1444 Nucleotide-sugar trans 99.7 1.4E-16 3.1E-21 145.9 18.4 168 101-268 14-183 (314)
6 PRK11272 putative DMT superfam 99.7 3.9E-14 8.5E-19 129.6 22.6 164 95-266 8-174 (292)
7 PLN00411 nodulin MtN21 family 99.6 2.2E-14 4.8E-19 135.6 21.1 158 109-267 23-214 (358)
8 PRK11689 aromatic amino acid e 99.6 2.6E-14 5.7E-19 131.0 19.8 159 99-267 8-181 (295)
9 TIGR00950 2A78 Carboxylate/Ami 99.6 4.5E-14 9.7E-19 125.8 19.0 147 115-267 5-153 (260)
10 PF08449 UAA: UAA transporter 99.6 3.4E-14 7.4E-19 130.9 18.1 160 107-268 8-180 (303)
11 TIGR00688 rarD rarD protein. T 99.6 1.2E-13 2.7E-18 123.6 20.0 157 100-266 7-170 (256)
12 PRK15430 putative chlorampheni 99.6 2.1E-13 4.7E-18 125.1 20.6 163 94-267 7-174 (296)
13 PRK11453 O-acetylserine/cystei 99.6 3E-13 6.5E-18 124.2 20.9 157 98-267 7-168 (299)
14 PF06027 DUF914: Eukaryotic pr 99.5 2.9E-12 6.4E-17 120.0 19.7 160 110-269 24-195 (334)
15 KOG1442 GDP-fucose transporter 99.5 1.7E-14 3.7E-19 129.9 3.4 173 94-266 23-209 (347)
16 PF00892 EamA: EamA-like trans 99.4 1.3E-12 2.9E-17 102.5 11.7 118 114-233 6-125 (126)
17 PRK10532 threonine and homoser 99.4 2.3E-11 4.9E-16 111.5 20.2 157 98-268 15-174 (293)
18 TIGR03340 phn_DUF6 phosphonate 99.4 2E-11 4.4E-16 111.0 19.2 149 114-265 16-167 (281)
19 COG0697 RhaT Permeases of the 99.3 4.5E-10 9.7E-15 100.1 21.8 149 116-265 24-177 (292)
20 PF04142 Nuc_sug_transp: Nucle 99.2 4.9E-10 1.1E-14 100.9 13.5 111 159-269 14-141 (244)
21 COG2510 Predicted membrane pro 99.2 4.1E-10 8.9E-15 91.3 11.4 130 100-233 7-138 (140)
22 PF13536 EmrE: Multidrug resis 99.0 1.9E-09 4.2E-14 85.5 10.4 105 133-238 2-110 (113)
23 TIGR00950 2A78 Carboxylate/Ami 99.0 4.2E-08 9.1E-13 87.3 17.5 116 114-230 143-260 (260)
24 TIGR00776 RhaT RhaT L-rhamnose 98.9 6.5E-08 1.4E-12 89.0 17.7 156 100-265 6-175 (290)
25 KOG2765 Predicted membrane pro 98.9 6E-09 1.3E-13 97.8 10.9 100 169-268 166-273 (416)
26 COG5070 VRG4 Nucleotide-sugar 98.9 4.1E-09 9E-14 93.1 9.0 157 105-265 12-178 (309)
27 PRK10532 threonine and homoser 98.9 8.9E-08 1.9E-12 87.8 17.8 118 114-234 163-281 (293)
28 PLN00411 nodulin MtN21 family 98.9 1.1E-07 2.3E-12 90.3 18.5 120 114-234 204-328 (358)
29 KOG1581 UDP-galactose transpor 98.9 1.9E-07 4.1E-12 85.7 17.8 174 92-267 7-197 (327)
30 PRK11689 aromatic amino acid e 98.8 1.6E-07 3.4E-12 86.2 16.5 118 113-234 170-287 (295)
31 COG5006 rhtA Threonine/homoser 98.8 2.7E-07 5.9E-12 82.9 16.9 140 117-266 30-172 (292)
32 PRK11272 putative DMT superfam 98.8 2.3E-07 4.9E-12 85.0 16.9 120 114-235 165-286 (292)
33 KOG1582 UDP-galactose transpor 98.8 3.5E-08 7.5E-13 89.5 9.9 170 95-267 39-215 (367)
34 KOG1580 UDP-galactose transpor 98.7 1.6E-08 3.4E-13 90.1 5.7 155 108-264 22-194 (337)
35 PRK11453 O-acetylserine/cystei 98.7 1.2E-06 2.7E-11 80.4 17.8 122 114-235 158-288 (299)
36 KOG2234 Predicted UDP-galactos 98.6 5.5E-06 1.2E-10 77.6 19.3 110 159-268 89-209 (345)
37 KOG3912 Predicted integral mem 98.6 2E-06 4.3E-11 78.5 14.4 158 110-268 14-202 (372)
38 TIGR00817 tpt Tpt phosphate/ph 98.5 8.4E-07 1.8E-11 81.4 11.8 124 110-234 156-293 (302)
39 COG2962 RarD Predicted permeas 98.5 5.7E-06 1.2E-10 75.7 16.8 155 102-266 14-172 (293)
40 TIGR03340 phn_DUF6 phosphonate 98.5 1.1E-06 2.3E-11 80.1 10.7 70 162-231 210-280 (281)
41 PRK15430 putative chlorampheni 98.5 6.8E-06 1.5E-10 75.5 15.3 70 164-233 215-284 (296)
42 PRK15051 4-amino-4-deoxy-L-ara 98.4 1.1E-05 2.3E-10 64.3 14.1 62 172-233 47-108 (111)
43 COG0697 RhaT Permeases of the 98.4 3.7E-05 8E-10 68.3 18.1 119 113-235 168-288 (292)
44 KOG4314 Predicted carbohydrate 98.3 5.2E-07 1.1E-11 78.7 4.7 107 162-268 53-161 (290)
45 PF03151 TPT: Triose-phosphate 98.3 5.6E-05 1.2E-09 61.9 16.4 125 109-233 10-152 (153)
46 KOG4510 Permease of the drug/m 98.3 3E-07 6.6E-12 83.3 1.9 154 108-266 47-215 (346)
47 PTZ00343 triose or hexose phos 98.3 4.7E-05 1E-09 71.9 16.7 123 110-233 205-347 (350)
48 TIGR00776 RhaT RhaT L-rhamnose 98.3 2.5E-05 5.5E-10 71.8 14.0 129 95-233 151-287 (290)
49 PRK02971 4-amino-4-deoxy-L-ara 97.9 0.0001 2.2E-09 60.3 9.8 71 165-235 50-123 (129)
50 COG5006 rhtA Threonine/homoser 97.8 0.00083 1.8E-08 60.8 13.6 119 111-231 160-279 (292)
51 KOG1583 UDP-N-acetylglucosamin 97.7 3.1E-05 6.7E-10 70.6 3.6 134 129-266 34-188 (330)
52 PRK10452 multidrug efflux syst 97.6 0.001 2.2E-08 53.9 11.3 69 166-234 34-103 (120)
53 PF08449 UAA: UAA transporter 97.6 0.0031 6.6E-08 58.1 15.5 134 101-234 156-297 (303)
54 PF06800 Sugar_transport: Suga 97.6 0.0016 3.4E-08 59.7 13.0 112 153-264 34-160 (269)
55 PRK09541 emrE multidrug efflux 97.5 0.0024 5.3E-08 50.8 11.8 66 169-234 37-103 (110)
56 PRK10650 multidrug efflux syst 97.4 0.0064 1.4E-07 48.4 13.0 67 166-232 39-106 (109)
57 PRK11431 multidrug efflux syst 97.4 0.005 1.1E-07 48.7 12.0 67 167-233 34-101 (105)
58 PF06027 DUF914: Eukaryotic pr 97.3 0.012 2.6E-07 55.6 16.0 140 91-235 164-306 (334)
59 KOG2766 Predicted membrane pro 97.2 8.7E-06 1.9E-10 73.5 -6.0 110 159-268 75-192 (336)
60 PF06800 Sugar_transport: Suga 97.1 0.018 3.8E-07 52.9 14.6 130 93-231 135-268 (269)
61 COG2076 EmrE Membrane transpor 97.1 0.0041 8.9E-08 49.2 8.9 68 167-234 35-103 (106)
62 COG2962 RarD Predicted permeas 97.0 0.063 1.4E-06 49.6 16.5 124 109-234 157-283 (293)
63 PF00893 Multi_Drug_Res: Small 96.8 0.014 3E-07 44.9 9.5 55 171-225 38-93 (93)
64 PF04657 DUF606: Protein of un 96.8 0.097 2.1E-06 43.2 14.9 115 116-231 18-138 (138)
65 TIGR00803 nst UDP-galactose tr 96.7 0.026 5.6E-07 49.4 11.3 65 167-231 157-221 (222)
66 KOG4510 Permease of the drug/m 96.6 0.0022 4.8E-08 58.6 4.0 76 158-233 249-324 (346)
67 TIGR00803 nst UDP-galactose tr 96.5 0.0062 1.3E-07 53.4 6.4 84 186-269 2-112 (222)
68 PF05653 Mg_trans_NIPA: Magnes 96.4 0.008 1.7E-07 55.8 6.7 68 166-233 53-121 (300)
69 TIGR00688 rarD rarD protein. T 96.2 0.1 2.3E-06 46.4 12.7 50 160-209 206-255 (256)
70 PF10639 UPF0546: Uncharacteri 96.2 0.016 3.5E-07 46.4 6.3 70 162-232 42-112 (113)
71 PRK13499 rhamnose-proton sympo 95.6 0.79 1.7E-05 43.6 16.0 102 158-259 69-191 (345)
72 PRK13499 rhamnose-proton sympo 95.0 1.4 3.1E-05 41.9 15.6 69 166-235 264-342 (345)
73 KOG1441 Glucose-6-phosphate/ph 94.9 0.12 2.7E-06 48.4 8.2 132 101-234 165-307 (316)
74 KOG1581 UDP-galactose transpor 94.7 0.47 1E-05 44.2 11.3 131 99-233 172-312 (327)
75 PF04142 Nuc_sug_transp: Nucle 94.6 2.4 5.2E-05 38.1 15.7 116 109-224 124-243 (244)
76 KOG2922 Uncharacterized conser 91.1 0.14 3E-06 48.0 2.2 67 167-233 68-135 (335)
77 COG3238 Uncharacterized protei 91.0 8.6 0.00019 32.3 13.8 116 116-233 22-145 (150)
78 KOG1580 UDP-galactose transpor 89.0 0.86 1.9E-05 41.4 5.4 72 160-231 239-310 (337)
79 KOG2765 Predicted membrane pro 88.3 7.7 0.00017 37.4 11.5 78 159-236 314-392 (416)
80 COG4975 GlcU Putative glucose 87.8 0.48 1E-05 43.1 3.0 73 159-231 206-282 (288)
81 PF06379 RhaT: L-rhamnose-prot 87.3 15 0.00032 35.0 12.7 103 159-261 70-192 (344)
82 COG5070 VRG4 Nucleotide-sugar 86.5 12 0.00025 34.0 10.9 121 109-230 165-292 (309)
83 KOG2234 Predicted UDP-galactos 84.2 40 0.00086 32.2 16.1 123 110-233 194-321 (345)
84 PF04342 DUF486: Protein of un 82.1 24 0.00051 28.0 9.7 55 178-232 51-106 (108)
85 COG4975 GlcU Putative glucose 80.4 0.18 4E-06 45.8 -2.9 111 153-263 50-173 (288)
86 KOG1444 Nucleotide-sugar trans 79.1 22 0.00048 33.4 10.1 128 106-234 164-300 (314)
87 COG3169 Uncharacterized protei 61.8 78 0.0017 25.0 11.7 31 202-232 83-113 (116)
88 PRK02237 hypothetical protein; 51.2 45 0.00096 26.6 5.3 39 196-234 67-105 (109)
89 KOG1583 UDP-N-acetylglucosamin 51.0 96 0.0021 29.1 8.2 124 109-233 174-313 (330)
90 KOG4831 Unnamed protein [Funct 50.5 25 0.00054 28.1 3.8 71 162-233 53-124 (125)
91 PF02694 UPF0060: Uncharacteri 49.3 44 0.00096 26.5 5.0 40 196-235 65-104 (107)
92 KOG1582 UDP-galactose transpor 48.8 1.4E+02 0.0031 27.9 8.9 50 187-236 285-334 (367)
93 KOG3912 Predicted integral mem 47.9 2.5E+02 0.0054 26.5 10.9 122 111-233 189-333 (372)
94 PF07207 Lir1: Light regulated 43.8 41 0.00089 27.6 4.2 9 1-10 1-9 (136)
95 KOG1442 GDP-fucose transporter 34.0 40 0.00088 31.5 3.0 133 100-233 185-326 (347)
96 COG3296 Uncharacterized protei 31.9 1.1E+02 0.0023 25.3 4.8 28 220-247 75-102 (143)
97 KOG4314 Predicted carbohydrate 28.3 2.4E+02 0.0052 25.3 6.7 63 175-237 217-279 (290)
98 PF05977 MFS_3: Transmembrane 27.9 6.2E+02 0.013 25.3 11.5 76 185-260 250-327 (524)
99 PF05653 Mg_trans_NIPA: Magnes 27.7 1.3E+02 0.0029 27.8 5.5 60 175-234 226-292 (300)
100 PRK07668 hypothetical protein; 26.5 5E+02 0.011 23.7 10.1 27 150-176 164-190 (254)
101 TIGR00997 ispZ intracellular s 26.0 4.3E+02 0.0093 22.7 14.4 42 156-197 46-87 (178)
102 KOG1443 Predicted integral mem 25.8 2.4E+02 0.0051 26.9 6.6 50 184-233 265-314 (349)
103 PF09656 PGPGW: Putative trans 22.4 2.6E+02 0.0057 19.3 4.8 44 218-266 5-48 (53)
104 PF08627 CRT-like: CRT-like; 21.8 3E+02 0.0065 22.6 5.7 40 95-134 53-93 (130)
105 COG2510 Predicted membrane pro 21.6 4.1E+02 0.0088 22.1 6.5 48 164-211 6-54 (140)
106 PF05977 MFS_3: Transmembrane 21.4 8.3E+02 0.018 24.4 11.6 85 185-269 41-136 (524)
107 COG4292 Predicted membrane pro 21.3 7.6E+02 0.016 23.9 12.6 42 101-143 56-97 (387)
108 PRK10213 nepI ribonucleoside t 20.2 7E+02 0.015 23.1 12.0 44 186-229 52-97 (394)
No 1
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.97 E-value=9.4e-29 Score=232.38 Aligned_cols=173 Identities=36% Similarity=0.597 Sum_probs=159.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCC--HHhHHHHHHHHHHHH
Q 041338 96 QTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLT--RSQFAVILPLAVAHT 173 (269)
Q Consensus 96 ~~~~~~~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls--~~~~~~ll~lgll~~ 173 (269)
..+++.++|.+||.+|+.++++||++++.+|+|++++.+|++++++++.+.|..+.++.++.. +++++.++++|+++.
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999999999887666766555555553 457899999999998
Q ss_pred HHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHH
Q 041338 174 LGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEATFNWTGFCSAMASNVT 253 (269)
Q Consensus 174 ~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~s~~~~G~~~alls~~~ 253 (269)
+.+...+.|+++++++++|++|+++|+|+++++++++|||++++++++++++++||++++.+|.++++.|++++++++++
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~ 205 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG 205 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred HHHHHHHHHhhcccC
Q 041338 254 NQSRNVFSKKFMVRK 268 (269)
Q Consensus 254 ~al~~V~~Kkll~~~ 268 (269)
+++|+++.||+++++
T Consensus 206 ~a~~~i~~k~~~~~~ 220 (350)
T PTZ00343 206 SSLRSIFAKKTMKNK 220 (350)
T ss_pred HHHHHHHHHHHhccc
Confidence 999999999998765
No 2
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.95 E-value=6.1e-26 Score=208.05 Aligned_cols=168 Identities=54% Similarity=0.907 Sum_probs=154.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHHHHHHHHH
Q 041338 99 QLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVAHTLGNLL 178 (269)
Q Consensus 99 ~~~~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll~~~~~~l 178 (269)
+.+.++.+||.+|+.++++||++++.+++|+++++.|+.++.+++.+.+..+..++++.++++++.++++|++++..+.+
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 81 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999887766654444456667889999999999999888899
Q ss_pred HHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHH
Q 041338 179 TNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEATFNWTGFCSAMASNVTNQSRN 258 (269)
Q Consensus 179 ~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~s~~~~G~~~alls~~~~al~~ 258 (269)
+|.+++|+++++++++++++|+|+++++++++|||++++++++++++++|+++...++.++++.|++++++++++|++|+
T Consensus 82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~ 161 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRN 161 (302)
T ss_pred HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877777788899999999999999999
Q ss_pred HHHHhhcc
Q 041338 259 VFSKKFMV 266 (269)
Q Consensus 259 V~~Kkll~ 266 (269)
++.||.++
T Consensus 162 v~~k~~~~ 169 (302)
T TIGR00817 162 IFSKKAMT 169 (302)
T ss_pred HHHHHhhc
Confidence 99999887
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.95 E-value=7.6e-28 Score=222.57 Aligned_cols=175 Identities=40% Similarity=0.647 Sum_probs=164.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCC-CHHhHHHHHHHHH
Q 041338 94 AIQTLQLGGMFGLWYLLNIYFNIFNKQVLK--VFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKL-TRSQFAVILPLAV 170 (269)
Q Consensus 94 ~~~~~~~~~l~~~W~~~si~~~i~nK~il~--~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~l-s~~~~~~ll~lgl 170 (269)
.++....+..+..||++|++++++||++++ +|+||.++|..|++++.+...+.+.++..+.++. ++.+++.++++|+
T Consensus 12 ~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~ 91 (316)
T KOG1441|consen 12 LKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGL 91 (316)
T ss_pred cchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHH
Confidence 347788899999999999999999999999 8999999999999999999988888887776665 4578999999999
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHH
Q 041338 171 AHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEATFNWTGFCSAMAS 250 (269)
Q Consensus 171 l~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~s~~~~G~~~alls 250 (269)
++++++++.|.|+.|++||++|++|+++|+|++++++++.+|++++++++++++++.||.+++.+|.++|+.|++.++++
T Consensus 92 ~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s 171 (316)
T KOG1441|consen 92 VFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMIS 171 (316)
T ss_pred HHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccC
Q 041338 251 NVTNQSRNVFSKKFMVRK 268 (269)
Q Consensus 251 ~~~~al~~V~~Kkll~~~ 268 (269)
++.+++++++.|+++++|
T Consensus 172 ~~~~al~~I~~~~ll~~~ 189 (316)
T KOG1441|consen 172 NLAFALRNILSKKLLTSK 189 (316)
T ss_pred HHHHHHHHHHHHHhhhcc
Confidence 999999999999999643
No 4
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.79 E-value=6.5e-19 Score=160.14 Aligned_cols=177 Identities=24% Similarity=0.303 Sum_probs=156.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCC----CCCH-HhHHHHHH
Q 041338 93 AAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARP----KLTR-SQFAVILP 167 (269)
Q Consensus 93 ~~~~~~~~~~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~----~ls~-~~~~~ll~ 167 (269)
-+.+......++.+||.++++...++|+....|+||+.++.+|+++-.++..........+.+ ..++ ++.+.+.|
T Consensus 10 ~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aP 89 (349)
T KOG1443|consen 10 FLMNRVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAP 89 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhh
Confidence 456667777777999999999999999999999999999999999888776554333222222 3344 45778889
Q ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccccccccHHHHHHH
Q 041338 168 LAVAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEATFNWTGFCSA 247 (269)
Q Consensus 168 lgll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~s~~~~G~~~a 247 (269)
.|+..++.+.+.|++++|+++++++|.|+..++|+.+++.+|.-|++++.-.+.++++-+|+.+.++++.++|..|+.++
T Consensus 90 talata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv 169 (349)
T KOG1443|consen 90 TALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLV 169 (349)
T ss_pred hhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccCC
Q 041338 248 MASNVTNQSRNVFSKKFMVRKE 269 (269)
Q Consensus 248 lls~~~~al~~V~~Kkll~~~~ 269 (269)
+++.++.+++..+.+.+++|.|
T Consensus 170 ~~aS~~sGlRW~~tQ~ll~~~~ 191 (349)
T KOG1443|consen 170 LAASLLSGLRWAFTQMLLRNQP 191 (349)
T ss_pred HHHHHhhhhhHHHHHHHHhcCc
Confidence 9999999999999999998864
No 5
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.74 E-value=1.4e-16 Score=145.95 Aligned_cols=168 Identities=21% Similarity=0.266 Sum_probs=155.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHH--HHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHHHHHHHHH
Q 041338 101 GGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTA--FQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVAHTLGNLL 178 (269)
Q Consensus 101 ~~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~--~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll~~~~~~l 178 (269)
....+.+..+++.+.+.||+++..++||..+.. +|.+++.+.+.++...+..+.++++++..++++|+.+++.+..+.
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t 93 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFT 93 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHH
Confidence 445566778889999999999999999988877 999999998888777777788889999999999999999999999
Q ss_pred HHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHH
Q 041338 179 TNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEATFNWTGFCSAMASNVTNQSRN 258 (269)
Q Consensus 179 ~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~s~~~~G~~~alls~~~~al~~ 258 (269)
...+++|++++++.++|..+|+++++.+..++|.++++..+.++..+.+|......+|.++|..|+.|++...++.+.+.
T Consensus 94 ~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~ 173 (314)
T KOG1444|consen 94 GSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFV 173 (314)
T ss_pred ccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccC
Q 041338 259 VFSKKFMVRK 268 (269)
Q Consensus 259 V~~Kkll~~~ 268 (269)
++.||..+.+
T Consensus 174 v~~kk~vd~~ 183 (314)
T KOG1444|consen 174 VYVKKSVDSA 183 (314)
T ss_pred HHHHHhhccc
Confidence 9999987654
No 6
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.65 E-value=3.9e-14 Score=129.65 Aligned_cols=164 Identities=15% Similarity=0.168 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHHH-H
Q 041338 95 IQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVAH-T 173 (269)
Q Consensus 95 ~~~~~~~~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll~-~ 173 (269)
+-.+.+.....+|.. ..+..|...++.+ |..++++|+.++.+++++....+..+ ..+++++...+.+|.+. .
T Consensus 8 ~~~~~~~~~~~iWg~----~~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~ 80 (292)
T PRK11272 8 PLFGALFALYIIWGS----TYLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLA 80 (292)
T ss_pred HHHHHHHHHHHHHhh----HHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHH
Confidence 334455566666654 3457898888888 99999999999988876543322212 23467788778888875 4
Q ss_pred HHHHHHHHHH-hhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccc-cccccHHHHHHHHHHH
Q 041338 174 LGNLLTNISL-VTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLT-EATFNWTGFCSAMASN 251 (269)
Q Consensus 174 ~~~~l~n~AL-~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~-~~s~~~~G~~~alls~ 251 (269)
..+.+.+.+. ++++++.+.++.++.|+++.+++.+ +|||++++++.++++.++|+.+...+ +.+.+..|.+++++++
T Consensus 81 ~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~ 159 (292)
T PRK11272 81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIAS 159 (292)
T ss_pred HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHH
Confidence 5567888898 9999999999999999999999986 69999999999999999999988643 3445678999999999
Q ss_pred HHHHHHHHHHHhhcc
Q 041338 252 VTNQSRNVFSKKFMV 266 (269)
Q Consensus 252 ~~~al~~V~~Kkll~ 266 (269)
++|+.+.+..||..+
T Consensus 160 ~~~a~~~~~~~~~~~ 174 (292)
T PRK11272 160 ASWAFGSVWSSRLPL 174 (292)
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999999754
No 7
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.65 E-value=2.2e-14 Score=135.64 Aligned_cols=158 Identities=11% Similarity=0.117 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHHHhhc-CCcHHHHHHHHHHHHHHHHHHHHHhh-c-cCCCCCCHHhHHHHHHHHHHHHHHHHHHHHHHhh
Q 041338 109 LLNIYFNIFNKQVLKV-FPYPTTVTAFQFGCGTVMIILMWTLN-L-YARPKLTRSQFAVILPLAVAHTLGNLLTNISLVT 185 (269)
Q Consensus 109 ~~si~~~i~nK~il~~-f~~P~tLt~~q~~v~~l~l~l~~~l~-~-~~~~~ls~~~~~~ll~lgll~~~~~~l~n~AL~~ 185 (269)
..+.++.++.|..++. .+ |..++++|++++++++.+....+ . .+.++.+++++..+..+|++..+...+.+.+++|
T Consensus 23 ~~~~~~~~~~k~a~~~G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~ 101 (358)
T PLN00411 23 TSVVGISTLFKVATSKGLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEY 101 (358)
T ss_pred HHHHHHHHHHHHHHHCCCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4556677888888884 66 99999999999998886553322 1 2234445777788888888875556689999999
Q ss_pred cCHHHHHHHhhhhHHHHHHHHHHh------hCCCCCHHHHHHHHHHHHhhhhhcc-ccc---------------------
Q 041338 186 VNVSFTHTIKAMEPFFTVLFAALF------LGEKPTIWLASSLVPIVGGVALASL-TEA--------------------- 237 (269)
Q Consensus 186 vsvs~~~iikal~Pvftvils~l~------lgEr~t~~~~lgl~lii~GV~l~~~-~~~--------------------- 237 (269)
++++.+.++.++.|+|++++++++ ++||+++++++|+++.++|+++... ++.
T Consensus 102 tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~ 181 (358)
T PLN00411 102 SNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLS 181 (358)
T ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccC
Confidence 999999999999999999999999 6999999999999999999998653 111
Q ss_pred --ccc-HHHHHHHHHHHHHHHHHHHHHHhhccc
Q 041338 238 --TFN-WTGFCSAMASNVTNQSRNVFSKKFMVR 267 (269)
Q Consensus 238 --s~~-~~G~~~alls~~~~al~~V~~Kkll~~ 267 (269)
..+ ..|.+++++++++|+.|+++.||..++
T Consensus 182 ~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~ 214 (358)
T PLN00411 182 SSNSDWLIGGALLTIQGIFVSVSFILQAHIMSE 214 (358)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112 459999999999999999999998754
No 8
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.64 E-value=2.6e-14 Score=131.05 Aligned_cols=159 Identities=18% Similarity=0.157 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHHHHHHHHH
Q 041338 99 QLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVAHTLGNLL 178 (269)
Q Consensus 99 ~~~~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll~~~~~~l 178 (269)
-....+.+|... .+..|..++.+| |..++++|+.++.+++.+.. +.++..+++++.++..++...+.+.+
T Consensus 8 ~~l~a~~~Wg~~----~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~ 77 (295)
T PRK11689 8 IGLIAILLWSTM----VGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV-----GFPRLRQFPKRYLLAGGLLFVSYEIC 77 (295)
T ss_pred HHHHHHHHHHHH----HHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc-----cccccccccHHHHHHHhHHHHHHHHH
Confidence 345566777642 356899999999 99999999999988876432 11222222333333333434555667
Q ss_pred HHHHHhh----cCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccccc-----------cccHHH
Q 041338 179 TNISLVT----VNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEA-----------TFNWTG 243 (269)
Q Consensus 179 ~n~AL~~----vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~-----------s~~~~G 243 (269)
.+.++++ .+++.+.++.++.|+|+++++++++|||+++++++++++.++|+.+...++. +.+..|
T Consensus 78 ~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G 157 (295)
T PRK11689 78 LALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLS 157 (295)
T ss_pred HHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHH
Confidence 7777754 5778889999999999999999999999999999999999999998865432 123569
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccc
Q 041338 244 FCSAMASNVTNQSRNVFSKKFMVR 267 (269)
Q Consensus 244 ~~~alls~~~~al~~V~~Kkll~~ 267 (269)
++++++++++|+.|+++.||..++
T Consensus 158 ~~~~l~aa~~~A~~~v~~k~~~~~ 181 (295)
T PRK11689 158 YGLAFIGAFIWAAYCNVTRKYARG 181 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCC
Confidence 999999999999999999998654
No 9
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.62 E-value=4.5e-14 Score=125.76 Aligned_cols=147 Identities=13% Similarity=0.119 Sum_probs=121.6
Q ss_pred HHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHH-HHHHHHHHHHHHhhcCHHHHHH
Q 041338 115 NIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVA-HTLGNLLTNISLVTVNVSFTHT 193 (269)
Q Consensus 115 ~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll-~~~~~~l~n~AL~~vsvs~~~i 193 (269)
.+..|..++....|..+++.|++++.+++.+....+ .+++++...+..|.+ +.+.+.+.+.|+++++++.+.+
T Consensus 5 ~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~i 78 (260)
T TIGR00950 5 GVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAAL 78 (260)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHH
Confidence 356899887644388999999998888776543222 235566667777766 4667789999999999999999
Q ss_pred HhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccc-cccccHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 041338 194 IKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLT-EATFNWTGFCSAMASNVTNQSRNVFSKKFMVR 267 (269)
Q Consensus 194 ikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~-~~s~~~~G~~~alls~~~~al~~V~~Kkll~~ 267 (269)
+.+++|+++.+++.+++|||++++++.++++.++|+++.... +.+.+..|++++++++++|+.++++.||..++
T Consensus 79 i~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~ 153 (260)
T TIGR00950 79 LLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKK 153 (260)
T ss_pred HHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhc
Confidence 999999999999999999999999999999999999887543 34456789999999999999999999998754
No 10
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.61 E-value=3.4e-14 Score=130.89 Aligned_cols=160 Identities=19% Similarity=0.295 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHHHhhc-C--CcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHHHHHHHHHHHHHH
Q 041338 107 WYLLNIYFNIFNKQVLKV-F--PYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVAHTLGNLLTNISL 183 (269)
Q Consensus 107 W~~~si~~~i~nK~il~~-f--~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll~~~~~~l~n~AL 183 (269)
.++.-..+.++++++.+. + ++|.++++.|+++..++..+...... .++.++..++..+++++++.++..++|.|+
T Consensus 8 i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 85 (303)
T PF08449_consen 8 IFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSNAAL 85 (303)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444456677777763 2 36999999999998887765432221 233345678888999999999999999999
Q ss_pred hhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcccccc----cc------HHHHHHHHHHHHH
Q 041338 184 VTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEAT----FN------WTGFCSAMASNVT 253 (269)
Q Consensus 184 ~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~s----~~------~~G~~~alls~~~ 253 (269)
+|++.++..++|++.|+++++++++++|||++++++++++++++|+++...+|.+ .+ ..|+++.+++.++
T Consensus 86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~ 165 (303)
T PF08449_consen 86 KYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLL 165 (303)
T ss_pred HhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998764421 11 2399999999999
Q ss_pred HHHHHHHHHhhcccC
Q 041338 254 NQSRNVFSKKFMVRK 268 (269)
Q Consensus 254 ~al~~V~~Kkll~~~ 268 (269)
.+.+.++.||++++.
T Consensus 166 ~a~~~~~qe~~~~~~ 180 (303)
T PF08449_consen 166 DAFTGVYQEKLFKKY 180 (303)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998653
No 11
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.60 E-value=1.2e-13 Score=123.61 Aligned_cols=157 Identities=13% Similarity=0.107 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHH-HhhccC----C-CCCCHHh-HHHHHHHHHHH
Q 041338 100 LGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMW-TLNLYA----R-PKLTRSQ-FAVILPLAVAH 172 (269)
Q Consensus 100 ~~~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~-~l~~~~----~-~~ls~~~-~~~ll~lgll~ 172 (269)
..+.+.+|... .++.|. +.+++ |.+++++|++++.+++.+.. ..+.++ + .+.++++ +..+...|++.
T Consensus 7 ~i~a~~~wg~~----~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 80 (256)
T TIGR00688 7 SLLASFLFGYM----YYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLI 80 (256)
T ss_pred HHHHHHHHHHH----HHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHH
Confidence 34445556532 345787 45688 99999999999988765432 222111 0 1112222 33455667777
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHH
Q 041338 173 TLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEATFNWTGFCSAMASNV 252 (269)
Q Consensus 173 ~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~s~~~~G~~~alls~~ 252 (269)
.+...++++|+++++++.+.++.++.|+|+++++++++|||+++++++++++.++|+++....+.+.+ .+++++++
T Consensus 81 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~ 156 (256)
T TIGR00688 81 GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAF 156 (256)
T ss_pred HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHH
Confidence 77788999999999999999999999999999999999999999999999999999998754322222 35788999
Q ss_pred HHHHHHHHHHhhcc
Q 041338 253 TNQSRNVFSKKFMV 266 (269)
Q Consensus 253 ~~al~~V~~Kkll~ 266 (269)
+|+.|.+..||..+
T Consensus 157 ~~a~~~i~~~~~~~ 170 (256)
T TIGR00688 157 SFTAYGLIRKALKN 170 (256)
T ss_pred HHHHHHHHHhhcCC
Confidence 99999999998754
No 12
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.59 E-value=2.1e-13 Score=125.09 Aligned_cols=163 Identities=12% Similarity=0.104 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCC---C-CCHHhHHHHHHHH
Q 041338 94 AIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARP---K-LTRSQFAVILPLA 169 (269)
Q Consensus 94 ~~~~~~~~~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~---~-ls~~~~~~ll~lg 169 (269)
.+..+...+...+|... .++.|.. .+++ |..++++|++++.+++.+.+..+..++. + .+++++...+ ++
T Consensus 7 ~~g~~~~l~a~~~wg~~----~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 79 (296)
T PRK15430 7 RQGVLLALAAYFIWGIA----PAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLA-VS 79 (296)
T ss_pred hhHHHHHHHHHHHHHHH----HHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHH-HH
Confidence 34444555555566543 2445765 5688 9999999999998876554322211100 0 1233332223 44
Q ss_pred HH-HHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccccccccHHHHHHHH
Q 041338 170 VA-HTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEATFNWTGFCSAM 248 (269)
Q Consensus 170 ll-~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~s~~~~G~~~al 248 (269)
.+ ....+.++++++++++++.+.++.++.|+++++++++++|||+++++++++++.++|+.++...+.+.. .+++
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l 155 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIAL 155 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHH
Confidence 44 556788999999999999999999999999999999999999999999999999999998764322221 4578
Q ss_pred HHHHHHHHHHHHHHhhccc
Q 041338 249 ASNVTNQSRNVFSKKFMVR 267 (269)
Q Consensus 249 ls~~~~al~~V~~Kkll~~ 267 (269)
+++++|+.|.++.||..++
T Consensus 156 ~aa~~~a~~~i~~r~~~~~ 174 (296)
T PRK15430 156 GLAFSFAFYGLVRKKIAVE 174 (296)
T ss_pred HHHHHHHHHHHHHHhcCCC
Confidence 8999999999999997543
No 13
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.58 E-value=3e-13 Score=124.18 Aligned_cols=157 Identities=18% Similarity=0.249 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHHHHH-HH
Q 041338 98 LQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVAHTL-GN 176 (269)
Q Consensus 98 ~~~~~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll~~~-~~ 176 (269)
+.......+|... .+..|..+++++ |..++++|++++.+.+.+.. . +++. .++.++..|++... ..
T Consensus 7 l~~l~~~~~Wg~~----~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~--~---~~~~---~~~~~~~~g~~~~~~~~ 73 (299)
T PRK11453 7 VLALLVVVVWGLN----FVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFV--A---RPKV---PLNLLLGYGLTISFGQF 73 (299)
T ss_pred HHHHHHHHHHhhh----HHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHh--c---CCCC---chHHHHHHHHHHHHHHH
Confidence 3345556677643 345788888999 99999999998776554322 1 1221 23344455665433 34
Q ss_pred HHHHHHHhh-cCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcccc---ccccHHHHHHHHHHHH
Q 041338 177 LLTNISLVT-VNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTE---ATFNWTGFCSAMASNV 252 (269)
Q Consensus 177 ~l~n~AL~~-vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~---~s~~~~G~~~alls~~ 252 (269)
.+.+.++++ ++++.+.++.++.|+++.+++++++|||+++++++++++.++|+.+....+ .+.++.|+++++++++
T Consensus 74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal 153 (299)
T PRK11453 74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAF 153 (299)
T ss_pred HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHH
Confidence 577788887 689999999999999999999999999999999999999999999886532 2335689999999999
Q ss_pred HHHHHHHHHHhhccc
Q 041338 253 TNQSRNVFSKKFMVR 267 (269)
Q Consensus 253 ~~al~~V~~Kkll~~ 267 (269)
+|+.|.++.||..++
T Consensus 154 ~~a~~~v~~~~~~~~ 168 (299)
T PRK11453 154 SWACGNIFNKKIMSH 168 (299)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999997643
No 14
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.49 E-value=2.9e-12 Score=120.01 Aligned_cols=160 Identities=13% Similarity=0.136 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHhh-cCCcHHHHHHHHHHHHHHHHHHHHHhhccC--CCCCCHHhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 041338 110 LNIYFNIFNKQVLK-VFPYPTTVTAFQFGCGTVMIILMWTLNLYA--RPKLTRSQFAVILPLAVAHTLGNLLTNISLVTV 186 (269)
Q Consensus 110 ~si~~~i~nK~il~-~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~--~~~ls~~~~~~ll~lgll~~~~~~l~n~AL~~v 186 (269)
++.+.+..+..+-+ +.+.|.+-+++-.+.-.++.......+..+ ..+.-+++|++.+.+|++...++.+.+.|++|+
T Consensus 24 ~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yT 103 (334)
T PF06027_consen 24 CITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYT 103 (334)
T ss_pred HHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 33444455555444 366677666554433222221111222111 112234667788889999999999999999999
Q ss_pred CHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccccc---------cccHHHHHHHHHHHHHHHHH
Q 041338 187 NVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEA---------TFNWTGFCSAMASNVTNQSR 257 (269)
Q Consensus 187 svs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~---------s~~~~G~~~alls~~~~al~ 257 (269)
+++.++++.++..+|+++++++++++|+++.+++|+++.++|+.+....|. +-..+|.+++++++++|+++
T Consensus 104 svtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~ 183 (334)
T PF06027_consen 104 SVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVS 183 (334)
T ss_pred cHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998765432 12379999999999999999
Q ss_pred HHHHHhhcccCC
Q 041338 258 NVFSKKFMVRKE 269 (269)
Q Consensus 258 ~V~~Kkll~~~~ 269 (269)
+|+.|++.++.+
T Consensus 184 nV~~E~~v~~~~ 195 (334)
T PF06027_consen 184 NVLEEKLVKKAP 195 (334)
T ss_pred HHHHHHhcccCC
Confidence 999999987653
No 15
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.48 E-value=1.7e-14 Score=129.89 Aligned_cols=173 Identities=21% Similarity=0.338 Sum_probs=148.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCcHHHHHHHHHHHHHHHHHHH-HHhhc----cCCC--CCCHHhH
Q 041338 94 AIQTLQLGGMFGLWYLLNIYFNIFNKQVLKV----FPYPTTVTAFQFGCGTVMIILM-WTLNL----YARP--KLTRSQF 162 (269)
Q Consensus 94 ~~~~~~~~~l~~~W~~~si~~~i~nK~il~~----f~~P~tLt~~q~~v~~l~l~l~-~~l~~----~~~~--~ls~~~~ 162 (269)
..+..+.......++.++|++.+.||++++. .+.|.+++.+|+.+...++... +.... +..| +++.+..
T Consensus 23 ~~n~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~ 102 (347)
T KOG1442|consen 23 EANAKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATA 102 (347)
T ss_pred HHhhhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHH
Confidence 3556667777788889999999999999984 6789999999999988877654 33221 1223 3566778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcccc---ccc
Q 041338 163 AVILPLAVAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTE---ATF 239 (269)
Q Consensus 163 ~~ll~lgll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~---~s~ 239 (269)
+.++|+.+++.+++.+.|.+++|++++++++-++++.+|+++++++++|++-+.....+++++++|-.+-...| ..+
T Consensus 103 r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~l 182 (347)
T KOG1442|consen 103 RQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTL 182 (347)
T ss_pred HhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988877666 567
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 041338 240 NWTGFCSAMASNVTNQSRNVFSKKFMV 266 (269)
Q Consensus 240 ~~~G~~~alls~~~~al~~V~~Kkll~ 266 (269)
+|.|.++++.+.++-|+..++.||.+.
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~ 209 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLP 209 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecc
Confidence 899999999999999999999998654
No 16
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.44 E-value=1.3e-12 Score=102.50 Aligned_cols=118 Identities=25% Similarity=0.451 Sum_probs=100.0
Q ss_pred HHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHH-HHhhccCCCCCCHHhHHHHHHHHHHH-HHHHHHHHHHHhhcCHHHH
Q 041338 114 FNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILM-WTLNLYARPKLTRSQFAVILPLAVAH-TLGNLLTNISLVTVNVSFT 191 (269)
Q Consensus 114 ~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~-~~l~~~~~~~ls~~~~~~ll~lgll~-~~~~~l~n~AL~~vsvs~~ 191 (269)
+.+++|...++++ |...+++|+.++.+ +.+. ...+..+..+.+.+++...+.++++. .++..+.+.++++.+++.+
T Consensus 6 ~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 83 (126)
T PF00892_consen 6 YSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIV 83 (126)
T ss_pred HHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHH
Confidence 4567899999999 99999999999987 4433 22222223456677888888888884 6788999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhc
Q 041338 192 HTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 192 ~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~ 233 (269)
+++..++|++++++++++++|+++++++.|++++++|+++..
T Consensus 84 ~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 84 SILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998864
No 17
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.42 E-value=2.3e-11 Score=111.55 Aligned_cols=157 Identities=18% Similarity=0.184 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHHHHHHHH
Q 041338 98 LQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVAHTLGNL 177 (269)
Q Consensus 98 ~~~~~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll~~~~~~ 177 (269)
....+.+++|. .+. ...|+.+++++ |..+.++|+.++.+++.+... + ++.+.++++++..+..|++......
T Consensus 15 ~~~~la~~~~~-~~~---~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~-~--~~~~~~~~~~~~~~~~g~~~~~~~~ 86 (293)
T PRK10532 15 LLLLIAMASIQ-SGA---SLAKSLFPLVG-APGVTALRLALGTLILIAIFK-P--WRLRFAKEQRLPLLFYGVSLGGMNY 86 (293)
T ss_pred HHHHHHHHHHH-hhH---HHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHh-H--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 33444444443 322 36899999999 999999999999888765431 1 1223456778888888888777778
Q ss_pred HHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccc--c-ccccHHHHHHHHHHHHHH
Q 041338 178 LTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLT--E-ATFNWTGFCSAMASNVTN 254 (269)
Q Consensus 178 l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~--~-~s~~~~G~~~alls~~~~ 254 (269)
+.++++++++++.+.++..+.|+++++++ +|++... .++.+.++|+.++... + .+.+..|.+++++++++|
T Consensus 87 ~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~ 160 (293)
T PRK10532 87 LFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACW 160 (293)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHH
Confidence 89999999999999999999999998887 3666544 4566778998876532 2 234678999999999999
Q ss_pred HHHHHHHHhhcccC
Q 041338 255 QSRNVFSKKFMVRK 268 (269)
Q Consensus 255 al~~V~~Kkll~~~ 268 (269)
+.|.+..||..++.
T Consensus 161 a~~~v~~r~~~~~~ 174 (293)
T PRK10532 161 AIYILSGQRAGAEH 174 (293)
T ss_pred HHHHHHHHHHhccC
Confidence 99999999987654
No 18
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.42 E-value=2e-11 Score=111.04 Aligned_cols=149 Identities=15% Similarity=0.151 Sum_probs=109.8
Q ss_pred HHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhh--ccCCCCCCHHhHHHHHHHHHHHHHHHHHHHHHHhhcCHHHH
Q 041338 114 FNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLN--LYARPKLTRSQFAVILPLAVAHTLGNLLTNISLVTVNVSFT 191 (269)
Q Consensus 114 ~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~--~~~~~~ls~~~~~~ll~lgll~~~~~~l~n~AL~~vsvs~~ 191 (269)
.++..|+..++-+ +. +++.+.++.+++.+....+ ..+.+..+++.+..++..++.....+.+.+.++++.+++.+
T Consensus 16 ~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 92 (281)
T TIGR03340 16 WNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGLV 92 (281)
T ss_pred HHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhh
Confidence 4567887766533 42 3555555555554433222 11112223344444444455566778899999999999999
Q ss_pred HHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHHHhhc
Q 041338 192 HTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTE-ATFNWTGFCSAMASNVTNQSRNVFSKKFM 265 (269)
Q Consensus 192 ~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~-~s~~~~G~~~alls~~~~al~~V~~Kkll 265 (269)
..+.+++|+++++++++++||++++++++|++++++|+.+....+ ...+..|+.++++++++|+.|.+..|+..
T Consensus 93 ~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~ 167 (281)
T TIGR03340 93 YPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAA 167 (281)
T ss_pred hhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccc
Confidence 999999999999999999999999999999999999999876543 23456788899999999999999998764
No 19
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.33 E-value=4.5e-10 Score=100.10 Aligned_cols=149 Identities=21% Similarity=0.235 Sum_probs=109.5
Q ss_pred HHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHH-HHHHHHHHHHHHhhcCHHHHHHH
Q 041338 116 IFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVA-HTLGNLLTNISLVTVNVSFTHTI 194 (269)
Q Consensus 116 i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll-~~~~~~l~n~AL~~vsvs~~~ii 194 (269)
...|...+....+....+.|++++.++.......+.....+ ...+++..+..+.+ ......+.+.++++++++.+.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 102 (292)
T COG0697 24 IALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRP-ALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLI 102 (292)
T ss_pred HHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccc-cccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHH
Confidence 44555555422156666668888877733322211110111 11223344444444 55567899999999999999999
Q ss_pred hhhhHHHHHHHHH-HhhCCCCCHHHHHHHHHHHHhhhhhccccccc---cHHHHHHHHHHHHHHHHHHHHHHhhc
Q 041338 195 KAMEPFFTVLFAA-LFLGEKPTIWLASSLVPIVGGVALASLTEATF---NWTGFCSAMASNVTNQSRNVFSKKFM 265 (269)
Q Consensus 195 kal~Pvftvils~-l~lgEr~t~~~~lgl~lii~GV~l~~~~~~s~---~~~G~~~alls~~~~al~~V~~Kkll 265 (269)
.++.|+++.+++. ++++||++++++.++++++.|++++...+... ...|..++++++++++.+.+..|+..
T Consensus 103 ~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~ 177 (292)
T COG0697 103 IGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS 177 (292)
T ss_pred HHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999997 67799999999999999999999998765443 35899999999999999999999876
No 20
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.17 E-value=4.9e-10 Score=100.91 Aligned_cols=111 Identities=20% Similarity=0.250 Sum_probs=99.6
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccccc-
Q 041338 159 RSQFAVILPLAVAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEA- 237 (269)
Q Consensus 159 ~~~~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~- 237 (269)
+++..++..-++++++.+.+.+.++++++++.+|+++.+..++|++++++++|+|+++++|+++++.++|+++...++.
T Consensus 14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 4567778888999999999999999999999999999999999999999999999999999999999999998764311
Q ss_pred --------c--------ccHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 041338 238 --------T--------FNWTGFCSAMASNVTNQSRNVFSKKFMVRKE 269 (269)
Q Consensus 238 --------s--------~~~~G~~~alls~~~~al~~V~~Kkll~~~~ 269 (269)
. -...|+++++++.++.++..|+.+|++|+++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~ 141 (244)
T PF04142_consen 94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN 141 (244)
T ss_pred ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 1 1258999999999999999999999999874
No 21
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.16 E-value=4.1e-10 Score=91.26 Aligned_cols=130 Identities=20% Similarity=0.187 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHH-hhccCC-CCCCHHhHHHHHHHHHHHHHHHH
Q 041338 100 LGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWT-LNLYAR-PKLTRSQFAVILPLAVAHTLGNL 177 (269)
Q Consensus 100 ~~~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~-l~~~~~-~~ls~~~~~~ll~lgll~~~~~~ 177 (269)
.+++.++++. ...++.|..+++.+ |.+-|+.|..+..+++..... .+.... ..++++.|..+..-|+....+..
T Consensus 7 ~ALLsA~fa~---L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl 82 (140)
T COG2510 7 YALLSALFAG---LTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWL 82 (140)
T ss_pred HHHHHHHHHH---HHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHH
Confidence 3444444443 34578999999999 999999999988887755432 232222 23567777777777776777888
Q ss_pred HHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhc
Q 041338 178 LTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 178 l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~ 233 (269)
++++|++...+|.+.=+-.+.|+++++++++++|||++.++++|++++++|+++.+
T Consensus 83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 99999999999999999999999999999999999999999999999999998765
No 22
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.05 E-value=1.9e-09 Score=85.48 Aligned_cols=105 Identities=19% Similarity=0.281 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHHHhhcc-CC--CCCCHHhHHHHHHHHHHHH-HHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHH
Q 041338 133 AFQFGCGTVMIILMWTLNLY-AR--PKLTRSQFAVILPLAVAHT-LGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAAL 208 (269)
Q Consensus 133 ~~q~~v~~l~l~l~~~l~~~-~~--~~ls~~~~~~ll~lgll~~-~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l 208 (269)
.+|+.++.+++......+.+ +. ....++.+...+..|++.. .+..++++|+++.+ +.+..+.+++|+|+++++.+
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 46777777766543222211 11 1122344555666677765 67889999999999 58889999999999999999
Q ss_pred hhCCCCCHHHHHHHHHHHHhhhhhcccccc
Q 041338 209 FLGEKPTIWLASSLVPIVGGVALASLTEAT 238 (269)
Q Consensus 209 ~lgEr~t~~~~lgl~lii~GV~l~~~~~~s 238 (269)
++|||++++++.+++++++|+++..+++.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999876543
No 23
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.98 E-value=4.2e-08 Score=87.28 Aligned_cols=116 Identities=21% Similarity=0.218 Sum_probs=90.8
Q ss_pred HHHHHHHHhhcCCc-HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHHHH-HHHHHHHHHHhhcCHHHH
Q 041338 114 FNIFNKQVLKVFPY-PTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVAHT-LGNLLTNISLVTVNVSFT 191 (269)
Q Consensus 114 ~~i~nK~il~~f~~-P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll~~-~~~~l~n~AL~~vsvs~~ 191 (269)
+.++.|+..++.+. +.....+++.++.+++.+...... +....+.+++..++.++++.+ ++..+++.++++.+++.+
T Consensus 143 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 221 (260)
T TIGR00950 143 GTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLG-PNPQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAA 221 (260)
T ss_pred HHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcC-CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence 45678888876651 334555788888877765432221 222335667777788888764 578899999999999999
Q ss_pred HHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhh
Q 041338 192 HTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVA 230 (269)
Q Consensus 192 ~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~ 230 (269)
+++.+++|++++++++++++|+++..++.|.++++.|++
T Consensus 222 s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 222 SILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999974
No 24
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.94 E-value=6.5e-08 Score=88.95 Aligned_cols=156 Identities=22% Similarity=0.190 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCC-HHhHHHHHHHHHHHHHHHHH
Q 041338 100 LGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLT-RSQFAVILPLAVAHTLGNLL 178 (269)
Q Consensus 100 ~~~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls-~~~~~~ll~lgll~~~~~~l 178 (269)
..+.+.+|.... +..|++. ..+ +..+. ++.++.+++...... .+.++.+ ++.+..-+..|++...++.+
T Consensus 6 ~lia~~~wGs~g----~~~k~~~-g~~-~~~~~--~~~~g~l~~~~~~~~--~~~~~~~~~~~~~~g~l~G~~w~ig~~~ 75 (290)
T TIGR00776 6 ALIPALFWGSFV----LINVKIG-GGP-YSQTL--GTTFGALILSIAIAI--FVLPEFWALSIFLVGLLSGAFWALGQIN 75 (290)
T ss_pred HHHHHHHHhhhH----HHHhccC-CCH-HHHHH--HHHHHHHHHHHHHHH--HhCCcccccHHHHHHHHHHHHHHhhhhh
Confidence 345566676543 3446554 455 32322 566676665443222 1222222 33344445556668888999
Q ss_pred HHHHHhhcCHHHHHHHhh-hhHHHHHHHHHHhhCCCCCHHH----HHHHHHHHHhhhhhcccccc-------cc-HHHHH
Q 041338 179 TNISLVTVNVSFTHTIKA-MEPFFTVLFAALFLGEKPTIWL----ASSLVPIVGGVALASLTEAT-------FN-WTGFC 245 (269)
Q Consensus 179 ~n~AL~~vsvs~~~iika-l~Pvftvils~l~lgEr~t~~~----~lgl~lii~GV~l~~~~~~s-------~~-~~G~~ 245 (269)
+..+.+++.++.+..+.. +.++++.+++.+++||+.++++ ++|++++++|+++....+.+ .+ ..|++
T Consensus 76 ~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~ 155 (290)
T TIGR00776 76 QFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGIL 155 (290)
T ss_pred HHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHH
Confidence 999999999999999988 8889999999999999999999 99999999999987643211 34 78999
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 041338 246 SAMASNVTNQSRNVFSKKFM 265 (269)
Q Consensus 246 ~alls~~~~al~~V~~Kkll 265 (269)
+++++.++|+.|.+..|+..
T Consensus 156 ~~l~sg~~y~~~~~~~~~~~ 175 (290)
T TIGR00776 156 LLLMSTIGYLVYVVVAKAFG 175 (290)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999753
No 25
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=98.94 E-value=6e-09 Score=97.75 Aligned_cols=100 Identities=22% Similarity=0.260 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccccc--------ccc
Q 041338 169 AVAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEA--------TFN 240 (269)
Q Consensus 169 gll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~--------s~~ 240 (269)
..+....++++|.||++.+|+...++.+++-+||..++.++.+||+|+.+++++++.++||+++..++. +-.
T Consensus 166 c~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~ 245 (416)
T KOG2765|consen 166 CPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRP 245 (416)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccch
Confidence 333445788999999999999999999999999999999999999999999999999999999987632 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 041338 241 WTGFCSAMASNVTNQSRNVFSKKFMVRK 268 (269)
Q Consensus 241 ~~G~~~alls~~~~al~~V~~Kkll~~~ 268 (269)
..|.++++++++.|++|.++.||-..++
T Consensus 246 llG~llaL~sA~~YavY~vllk~~~~~e 273 (416)
T KOG2765|consen 246 LLGNLLALLSALLYAVYTVLLKRKIGDE 273 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 7999999999999999999999988776
No 26
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.93 E-value=4.1e-09 Score=93.05 Aligned_cols=157 Identities=17% Similarity=0.161 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHHHHHHhhc--CCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHHHHHHHHHHHHH
Q 041338 105 GLWYLLNIYFNIFNKQVLKV--FPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVAHTLGNLLTNIS 182 (269)
Q Consensus 105 ~~W~~~si~~~i~nK~il~~--f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll~~~~~~l~n~A 182 (269)
..+...++.+++.||++++. |+.-..+.++|-.++.+.+.++..++..+. +..+.+.++|++++....+.....+
T Consensus 12 lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~f---R~t~aK~WfpiSfLLv~MIyt~SKs 88 (309)
T COG5070 12 LSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEF---RLTKAKKWFPISFLLVVMIYTSSKS 88 (309)
T ss_pred HHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhe---ehhhhhhhcCHHHHHHHHHHhcccc
Confidence 45567889999999999984 665677888999888887766655444322 2445677789999999989999999
Q ss_pred HhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccccc--------cccHHHHHHHHHHHHHH
Q 041338 183 LVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEA--------TFNWTGFCSAMASNVTN 254 (269)
Q Consensus 183 L~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~--------s~~~~G~~~alls~~~~ 254 (269)
++|.+++.+++.|.++.+.++..+..++|.+.+-....+.++++..-+.+.++|. .+| -|++|+....++.
T Consensus 89 LqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Nclss 167 (309)
T COG5070 89 LQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLSS 167 (309)
T ss_pred eeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHhH
Confidence 9999999999999999999999999999999999999999999999999888876 334 6999999999999
Q ss_pred HHHHHHHHhhc
Q 041338 255 QSRNVFSKKFM 265 (269)
Q Consensus 255 al~~V~~Kkll 265 (269)
+.+-...||..
T Consensus 168 aafVL~mrkri 178 (309)
T COG5070 168 AAFVLIMRKRI 178 (309)
T ss_pred HHHHHHHHHhh
Confidence 99988887754
No 27
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.92 E-value=8.9e-08 Score=87.80 Aligned_cols=118 Identities=19% Similarity=0.200 Sum_probs=89.7
Q ss_pred HHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHHHHH-HHHHHHHHHhhcCHHHHH
Q 041338 114 FNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVAHTL-GNLLTNISLVTVNVSFTH 192 (269)
Q Consensus 114 ~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll~~~-~~~l~n~AL~~vsvs~~~ 192 (269)
+.++.|+..++.+ |...+ ++.+++.+.+.+...... .....+...+...+.+|++.+. ++.++++++++++++.++
T Consensus 163 ~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as 239 (293)
T PRK10532 163 YILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQA-GEALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFG 239 (293)
T ss_pred HHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHcc-CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHH
Confidence 4566788776666 77664 555666655544322211 1122344555556788888654 678999999999999999
Q ss_pred HHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcc
Q 041338 193 TIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASL 234 (269)
Q Consensus 193 iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~ 234 (269)
++..++|+++++++++++||+++..+++|.+++++|++....
T Consensus 240 ~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 240 TLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998754
No 28
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.91 E-value=1.1e-07 Score=90.29 Aligned_cols=120 Identities=12% Similarity=0.171 Sum_probs=90.7
Q ss_pred HHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHh-hccC-C---CCCCHHhHHHHHHHHHHHHHHHHHHHHHHhhcCH
Q 041338 114 FNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTL-NLYA-R---PKLTRSQFAVILPLAVAHTLGNLLTNISLVTVNV 188 (269)
Q Consensus 114 ~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l-~~~~-~---~~ls~~~~~~ll~lgll~~~~~~l~n~AL~~vsv 188 (269)
+++..|.....++.+...+++++.++.+.+.+.... .... . ...+.. ...++..+++..+.+.+++++++++++
T Consensus 204 ~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~t~lay~lw~~~v~~~ga 282 (358)
T PLN00411 204 SFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAIITSVYYVIHSWTVRHKGP 282 (358)
T ss_pred HHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 456778877888756677888888877766443221 1110 0 111222 233555666555567799999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcc
Q 041338 189 SFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASL 234 (269)
Q Consensus 189 s~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~ 234 (269)
+.+.+...++|+|+++++++++||++++.+++|.+++++|+.++..
T Consensus 283 ~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~ 328 (358)
T PLN00411 283 LYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW 328 (358)
T ss_pred hHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999875
No 29
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.87 E-value=1.9e-07 Score=85.73 Aligned_cols=174 Identities=14% Similarity=0.078 Sum_probs=141.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------cCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHH
Q 041338 92 SAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLK--------VFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFA 163 (269)
Q Consensus 92 ~~~~~~~~~~~l~~~W~~~si~~~i~nK~il~--------~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~ 163 (269)
....+.+++.+.+..-|+.-....++...+.. .|..|.++.++|-.++.++...+ ++..+.+....+.|+
T Consensus 7 ~~~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~--l~~~k~~~~~~apl~ 84 (327)
T KOG1581|consen 7 GMANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAM--LKWWKKELSGVAPLY 84 (327)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHH--HhcccccCCCCCchh
Confidence 34567777777666666666777777777665 26679999999999888877443 233344333456788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcccc--c----
Q 041338 164 VILPLAVAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTE--A---- 237 (269)
Q Consensus 164 ~ll~lgll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~--~---- 237 (269)
....+++..+.+..+++.|++|++-+...+.|++--+-+++...++.|+|++..+|+...++.+||.+....+ .
T Consensus 85 ~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~ 164 (327)
T KOG1581|consen 85 KYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSK 164 (327)
T ss_pred HHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999876431 1
Q ss_pred ---cccHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 041338 238 ---TFNWTGFCSAMASNVTNQSRNVFSKKFMVR 267 (269)
Q Consensus 238 ---s~~~~G~~~alls~~~~al~~V~~Kkll~~ 267 (269)
..+.+|+.+....-++.+.-|..++++.++
T Consensus 165 ~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~ 197 (327)
T KOG1581|consen 165 SGRENSPIGILLLFGYLLFDGFTNATQDSLFKK 197 (327)
T ss_pred cCCCCchHhHHHHHHHHHHHhhHHhHHHHHhcc
Confidence 235899999999999999999999988764
No 30
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.84 E-value=1.6e-07 Score=86.23 Aligned_cols=118 Identities=14% Similarity=0.143 Sum_probs=86.6
Q ss_pred HHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Q 041338 113 YFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVAHTLGNLLTNISLVTVNVSFTH 192 (269)
Q Consensus 113 ~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~ 192 (269)
.+++++|+..++.+ |.+.. +.. +.+.+.+............+.+.+..++..++...+++.++++++++.+++.++
T Consensus 170 ~~~v~~k~~~~~~~-~~~~~--~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s 245 (295)
T PRK11689 170 AYCNVTRKYARGKN-GITLF--FIL-TALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLA 245 (295)
T ss_pred HHHHHHhhccCCCC-chhHH--HHH-HHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHH
Confidence 35667888766666 66542 232 333332222222111223456667777777755555788999999999999999
Q ss_pred HHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcc
Q 041338 193 TIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASL 234 (269)
Q Consensus 193 iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~ 234 (269)
++.+++|++.++++++++||+++..+++|.++++.|+.+...
T Consensus 246 ~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 246 TASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 999999999999999999999999999999999999988754
No 31
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.83 E-value=2.7e-07 Score=82.87 Aligned_cols=140 Identities=16% Similarity=0.180 Sum_probs=113.2
Q ss_pred HHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhh
Q 041338 117 FNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVAHTLGNLLTNISLVTVNVSFTHTIKA 196 (269)
Q Consensus 117 ~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~iika 196 (269)
+.|.++-.+. |...+.+|.+++.++++.++. - .+.+.++++++.++..|+...+.|.+++.+++.++.+.+..+..
T Consensus 30 ~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~R--P-wr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF 105 (292)
T COG5006 30 FAKSLFPLVG-AAGVTALRLAIAALILLALFR--P-WRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEF 105 (292)
T ss_pred HHHHHccccC-hhhHHHHHHHHHHHHHHHHhh--H-HHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhh
Confidence 5688888888 999999999999998876542 1 12456788999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccc---cccccHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 041338 197 MEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLT---EATFNWTGFCSAMASNVTNQSRNVFSKKFMV 266 (269)
Q Consensus 197 l~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~---~~s~~~~G~~~alls~~~~al~~V~~Kkll~ 266 (269)
+-|+.+.+++ .+|. +..+.+.+.+.|+.+.... ..+.|..|..+++++..||+.|.+..||.-+
T Consensus 106 ~GPL~vA~~~----sRr~--~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~ 172 (292)
T COG5006 106 TGPLAVALLS----SRRL--RDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGR 172 (292)
T ss_pred ccHHHHHHHh----ccch--hhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcc
Confidence 9999766554 3333 3445566677887766532 2467999999999999999999999998753
No 32
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.82 E-value=2.3e-07 Score=84.99 Aligned_cols=120 Identities=18% Similarity=0.067 Sum_probs=92.6
Q ss_pred HHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCC-CCCCHHhHHHHHHHHHHHH-HHHHHHHHHHhhcCHHHH
Q 041338 114 FNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYAR-PKLTRSQFAVILPLAVAHT-LGNLLTNISLVTVNVSFT 191 (269)
Q Consensus 114 ~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~-~~ls~~~~~~ll~lgll~~-~~~~l~n~AL~~vsvs~~ 191 (269)
+.++.|+.-+ -+ +...+++|+.++.+.+.+......... ...+.+.|..++.++++.+ +++.+++.++++++++.+
T Consensus 165 ~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~ 242 (292)
T PRK11272 165 GSVWSSRLPL-PV-GMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALA 242 (292)
T ss_pred HHHHHHhcCC-Cc-chHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHH
Confidence 3456677533 22 566778999888887655422211111 1124567888888888754 577899999999999999
Q ss_pred HHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccc
Q 041338 192 HTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLT 235 (269)
Q Consensus 192 ~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~ 235 (269)
.++..++|+++++++++++||++++.+++|.++++.|+.+....
T Consensus 243 s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 243 TSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999887653
No 33
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.79 E-value=3.5e-08 Score=89.45 Aligned_cols=170 Identities=15% Similarity=0.087 Sum_probs=138.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cC-CcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHH
Q 041338 95 IQTLQLGGMFGLWYLLNIYFNIFNKQVLK--VF-PYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVA 171 (269)
Q Consensus 95 ~~~~~~~~l~~~W~~~si~~~i~nK~il~--~f-~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll 171 (269)
+++.+..+.+.......+.+......+++ .| ||.|.+|+.|+++-..+.++-. ... .++.....|+....++.+
T Consensus 39 pkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~--~~~-~~k~r~iP~rtY~~la~~ 115 (367)
T KOG1582|consen 39 PKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIEL--QLI-QTKRRVIPWRTYVILAFL 115 (367)
T ss_pred chhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEE--Eee-cccceecchhHhhhhHhh
Confidence 56777777777777788888888999988 35 4789999999987665543321 111 122223468888889988
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcccc----ccccHHHHHHH
Q 041338 172 HTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTE----ATFNWTGFCSA 247 (269)
Q Consensus 172 ~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~----~s~~~~G~~~a 247 (269)
..+.+.++|-++.|.+-+..-+.|++.-+-+++.+.++-|+|+.+..+.+..++.+|.++....| ..||..|+.++
T Consensus 116 t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mI 195 (367)
T KOG1582|consen 116 TVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMI 195 (367)
T ss_pred hhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999987654 46789999999
Q ss_pred HHHHHHHHHHHHHHHhhccc
Q 041338 248 MASNVTNQSRNVFSKKFMVR 267 (269)
Q Consensus 248 lls~~~~al~~V~~Kkll~~ 267 (269)
-++-++.|.-.-.++|.|+.
T Consensus 196 sgALl~DA~iGNvQEk~m~~ 215 (367)
T KOG1582|consen 196 SGALLADAVIGNVQEKAMKM 215 (367)
T ss_pred HHHHHHHHHhhHHHHHHHhh
Confidence 99999999988888877754
No 34
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.73 E-value=1.6e-08 Score=90.07 Aligned_cols=155 Identities=15% Similarity=0.169 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHHhh-----------cCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHHHHHHH
Q 041338 108 YLLNIYFNIFNKQVLK-----------VFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVAHTLGN 176 (269)
Q Consensus 108 ~~~si~~~i~nK~il~-----------~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll~~~~~ 176 (269)
.++...+.|....+.+ .|.|.+++.++|+.+..++.-++.. .++..++|...-+.....++.+.+.+
T Consensus 22 fvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~--ir~~~~~D~t~~~~YaAcs~sYLlAM 99 (337)
T KOG1580|consen 22 FVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFL--IRKKTEIDNTPTKMYAACSASYLLAM 99 (337)
T ss_pred hheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhhee--ecccccccCCcchHHHHHHHHHHHHH
Confidence 3455556677777665 2667889999999988887644322 23445555555556667777888889
Q ss_pred HHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccccc-------cccHHHHHHHHH
Q 041338 177 LLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEA-------TFNWTGFCSAMA 249 (269)
Q Consensus 177 ~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~-------s~~~~G~~~all 249 (269)
+..|.|+++++-+..-+-|++.|+-++++++++.+++++|++|++++++++||++..+.|. +..-.|-++.++
T Consensus 100 VssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~l 179 (337)
T KOG1580|consen 100 VSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLIL 179 (337)
T ss_pred HhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999987642 223478888888
Q ss_pred HHHHHHHHHHHHHhh
Q 041338 250 SNVTNQSRNVFSKKF 264 (269)
Q Consensus 250 s~~~~al~~V~~Kkl 264 (269)
+-...++-...+.|+
T Consensus 180 SL~mDGlTg~~Qdri 194 (337)
T KOG1580|consen 180 SLAMDGLTGSIQDRI 194 (337)
T ss_pred HHHhcccchhHHHHH
Confidence 887777777766654
No 35
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.70 E-value=1.2e-06 Score=80.40 Aligned_cols=122 Identities=19% Similarity=0.168 Sum_probs=90.5
Q ss_pred HHHHHHHHhhcCCcH--HHHHHHHHHHHHHHHHHH-HHhhccC-----CCCCCHHhHHHHHHHHHHHHH-HHHHHHHHHh
Q 041338 114 FNIFNKQVLKVFPYP--TTVTAFQFGCGTVMIILM-WTLNLYA-----RPKLTRSQFAVILPLAVAHTL-GNLLTNISLV 184 (269)
Q Consensus 114 ~~i~nK~il~~f~~P--~tLt~~q~~v~~l~l~l~-~~l~~~~-----~~~ls~~~~~~ll~lgll~~~-~~~l~n~AL~ 184 (269)
+.++.|+..+..+.| .....++++++.+..... ....... ....+.+.+..++.+|++.+. ++.+++.+++
T Consensus 158 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~ 237 (299)
T PRK11453 158 GNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLG 237 (299)
T ss_pred HHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677765544423 344556666655443322 2111110 113456778888999988765 6789999999
Q ss_pred hcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccc
Q 041338 185 TVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLT 235 (269)
Q Consensus 185 ~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~ 235 (269)
+.++..+.++..++|++.++++++++||+++..+++|.+++++|+.+...+
T Consensus 238 ~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 238 RYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999987643
No 36
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=98.62 E-value=5.5e-06 Score=77.60 Aligned_cols=110 Identities=19% Similarity=0.226 Sum_probs=97.2
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcccc--
Q 041338 159 RSQFAVILPLAVAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTE-- 236 (269)
Q Consensus 159 ~~~~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~-- 236 (269)
+++..++..-++++++.+-+.+.++.+.+++++++...+..+.|++++.+++++|.++++|.++++.+.|+.+...++
T Consensus 89 ~~~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~ 168 (345)
T KOG2234|consen 89 PRETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS 168 (345)
T ss_pred hHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence 345667777788899977799999999999999999999999999999999999999999999999999999987211
Q ss_pred ---------ccccHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 041338 237 ---------ATFNWTGFCSAMASNVTNQSRNVFSKKFMVRK 268 (269)
Q Consensus 237 ---------~s~~~~G~~~alls~~~~al~~V~~Kkll~~~ 268 (269)
.+-.+.|+..++++.++.++..|+.+|+++++
T Consensus 169 ~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s 209 (345)
T KOG2234|consen 169 PTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGS 209 (345)
T ss_pred CCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 11247899999999999999999999999875
No 37
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=98.56 E-value=2e-06 Score=78.49 Aligned_cols=158 Identities=15% Similarity=0.157 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHhh-------cCCcHHHHHHHHHHHHH-HHHHHHHHhhccCC-CC-------C-CHH--h--HHHHHHH
Q 041338 110 LNIYFNIFNKQVLK-------VFPYPTTVTAFQFGCGT-VMIILMWTLNLYAR-PK-------L-TRS--Q--FAVILPL 168 (269)
Q Consensus 110 ~si~~~i~nK~il~-------~f~~P~tLt~~q~~v~~-l~l~l~~~l~~~~~-~~-------l-s~~--~--~~~ll~l 168 (269)
++..-++..|+.-+ .|..|+.-+.. |+.|- +|+.+....+.+.. +. + +.+ . -...++-
T Consensus 14 sGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~-mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~P 92 (372)
T KOG3912|consen 14 SGSFNTLVAKWADSIQAEGSPGFQHPVLQALL-MFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPP 92 (372)
T ss_pred hccHHHHHHHHHHhhhhhCCCccccHHHHHHH-HHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecCh
Confidence 33334467888765 25557765544 44454 45444333222110 10 1 111 1 2334567
Q ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcccccc----------
Q 041338 169 AVAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEAT---------- 238 (269)
Q Consensus 169 gll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~s---------- 238 (269)
+++-..+..+.+.++.+++++..|+++....+|+.+++..+++++++.++|+|+..+++|++++...|..
T Consensus 93 al~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s 172 (372)
T KOG3912|consen 93 ALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYS 172 (372)
T ss_pred HHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccc
Confidence 8888889999999999999999999999999999999999999999999999999999999988765321
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 041338 239 FNWTGFCSAMASNVTNQSRNVFSKKFMVRK 268 (269)
Q Consensus 239 ~~~~G~~~alls~~~~al~~V~~Kkll~~~ 268 (269)
--..|.++++++-+.-+.+-|.-+|.+++.
T Consensus 173 ~iitGdllIiiaqiivaiQ~v~Eek~l~~~ 202 (372)
T KOG3912|consen 173 SIITGDLLIIIAQIIVAIQMVCEEKQLKKS 202 (372)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 125799999999999999999999887653
No 38
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.54 E-value=8.4e-07 Score=81.36 Aligned_cols=124 Identities=15% Similarity=0.050 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHhh--cCCcHHHHHHHHHHHHHHHHHHHHH-hhccCCCC---------CCHHhHHH-HHHHHH-HHHHH
Q 041338 110 LNIYFNIFNKQVLK--VFPYPTTVTAFQFGCGTVMIILMWT-LNLYARPK---------LTRSQFAV-ILPLAV-AHTLG 175 (269)
Q Consensus 110 ~si~~~i~nK~il~--~f~~P~tLt~~q~~v~~l~l~l~~~-l~~~~~~~---------ls~~~~~~-ll~lgl-l~~~~ 175 (269)
+...+.++.|+..+ +++ |..++.+|+..+.+++.+... .+...... ........ .+..++ .+...
T Consensus 156 ~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (302)
T TIGR00817 156 TFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFY 234 (302)
T ss_pred HHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHH
Confidence 33446678888887 677 999999999988887766532 22111000 00001111 112222 12223
Q ss_pred HHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcc
Q 041338 176 NLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASL 234 (269)
Q Consensus 176 ~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~ 234 (269)
+.+.+.+++++++..++++..++|+++++++++++||+++..+++|.+++++|+.+...
T Consensus 235 ~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 235 QQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 35667899999999999999999999999999999999999999999999999998764
No 39
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.54 E-value=5.7e-06 Score=75.71 Aligned_cols=155 Identities=17% Similarity=0.201 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHH-HHhhccCCC---CCCHHhHHHHHHHHHHHHHHHH
Q 041338 102 GMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILM-WTLNLYARP---KLTRSQFAVILPLAVAHTLGNL 177 (269)
Q Consensus 102 ~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~-~~l~~~~~~---~ls~~~~~~ll~lgll~~~~~~ 177 (269)
..-.+|.. .-++.|. ++..+ +..+.+.|...+..++.+. ...++.+.. ..+++.+..++..+++.+....
T Consensus 14 ~Ay~lwG~----lp~y~kl-l~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~ 87 (293)
T COG2962 14 LAYLLWGL----LPLYFKL-LEPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWW 87 (293)
T ss_pred HHHHHHHH----HHHHHHH-HccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 33445544 3445665 56678 8899999999888776543 222322111 1123344445555555666667
Q ss_pred HHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHH
Q 041338 178 LTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEATFNWTGFCSAMASNVTNQSR 257 (269)
Q Consensus 178 l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~s~~~~G~~~alls~~~~al~ 257 (269)
.+.+|..+-.+-.+++-....|++.++++.+++|||+++.+++++++..+||..-.+...++.|..+. =+++|+.|
T Consensus 88 lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~----la~sf~~Y 163 (293)
T COG2962 88 LFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALA----LALSFGLY 163 (293)
T ss_pred HhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHH----HHHHHHHH
Confidence 99999999888889999999999999999999999999999999999999999988777788876544 46788888
Q ss_pred HHHHHhhcc
Q 041338 258 NVFSKKFMV 266 (269)
Q Consensus 258 ~V~~Kkll~ 266 (269)
...-|++--
T Consensus 164 gl~RK~~~v 172 (293)
T COG2962 164 GLLRKKLKV 172 (293)
T ss_pred HHHHHhcCC
Confidence 887776543
No 40
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.48 E-value=1.1e-06 Score=80.07 Aligned_cols=70 Identities=16% Similarity=0.141 Sum_probs=61.7
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhh
Q 041338 162 FAVILPLAVA-HTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVAL 231 (269)
Q Consensus 162 ~~~ll~lgll-~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l 231 (269)
+..++.++.+ ..+++.+++.++++.+++.+..+.+++|++.++++++++||++++.+++|.+++++|+.+
T Consensus 210 ~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 210 ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 4444555555 456788999999999999999999999999999999999999999999999999999876
No 41
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.45 E-value=6.8e-06 Score=75.46 Aligned_cols=70 Identities=19% Similarity=0.209 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhc
Q 041338 164 VILPLAVAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 164 ~ll~lgll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~ 233 (269)
.++..++...+++.+.+.++++.+++.++++..++|++.+++++++++|+++..++.|.+++++|+.+..
T Consensus 215 ~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 215 LLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV 284 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 3444555556678999999999999999999999999999999999999999999999999988887764
No 42
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.44 E-value=1.1e-05 Score=64.33 Aligned_cols=62 Identities=18% Similarity=0.182 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhc
Q 041338 172 HTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 172 ~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~ 233 (269)
+.....+...+++++|++.+..+-++.++++++++++++||++++++++|+.++++|+++..
T Consensus 47 ~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 47 LGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 45577899999999999999999999999999999999999999999999999999998764
No 43
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.39 E-value=3.7e-05 Score=68.34 Aligned_cols=119 Identities=24% Similarity=0.336 Sum_probs=89.2
Q ss_pred HHHHHHHHHhhcCCcHHHHHH-HHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHHHHH-HHHHHHHHHhhcCHHH
Q 041338 113 YFNIFNKQVLKVFPYPTTVTA-FQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVAHTL-GNLLTNISLVTVNVSF 190 (269)
Q Consensus 113 ~~~i~nK~il~~f~~P~tLt~-~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll~~~-~~~l~n~AL~~vsvs~ 190 (269)
.+.+.+|++. ..+ +..... +++. +...+.......... ...+.+.+..+..+|++.++ ++.+.+.+++..+++.
T Consensus 168 ~~~~~~~~~~-~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~ 243 (292)
T COG0697 168 LYTALVKRLS-RLG-PVTLALLLQLL-LALLLLLLFFLSGFG-APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASL 243 (292)
T ss_pred HHHHHHHHhc-CCC-hHHHHHHHHHH-HHHHHHHHHHhcccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH
Confidence 3556777776 444 666665 5555 222222222121111 23456778888888988774 8899999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccc
Q 041338 191 THTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLT 235 (269)
Q Consensus 191 ~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~ 235 (269)
.+++..++|++.+++++++++|+++..++.|.+++++|+.+....
T Consensus 244 ~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 244 VALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999987643
No 44
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.34 E-value=5.2e-07 Score=78.66 Aligned_cols=107 Identities=20% Similarity=0.274 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcccc--ccc
Q 041338 162 FAVILPLAVAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTE--ATF 239 (269)
Q Consensus 162 ~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~--~s~ 239 (269)
.+...|..++.++.++.+..++++++++-++-+.++.-.|+.+++++.+|+++..-+.++.++.+.|+++..+.| ...
T Consensus 53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~ 132 (290)
T KOG4314|consen 53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD 132 (290)
T ss_pred eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence 455678888889999999999999999999999999999999999999999999999999999999999988643 445
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 041338 240 NWTGFCSAMASNVTNQSRNVFSKKFMVRK 268 (269)
Q Consensus 240 ~~~G~~~alls~~~~al~~V~~Kkll~~~ 268 (269)
.+.|+.+++.+++..++|.|..|+...+.
T Consensus 133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnA 161 (290)
T KOG4314|consen 133 EIIGIACAVGSAFMAALYKVLFKMFIGNA 161 (290)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 79999999999999999999999987653
No 45
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.33 E-value=5.6e-05 Score=61.93 Aligned_cols=125 Identities=17% Similarity=0.172 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHhhc------CCcHHHHHHHHHHHHHHHHHHHHHh-hccCC----C-----CC--CHHhHHHHHHHHH
Q 041338 109 LLNIYFNIFNKQVLKV------FPYPTTVTAFQFGCGTVMIILMWTL-NLYAR----P-----KL--TRSQFAVILPLAV 170 (269)
Q Consensus 109 ~~si~~~i~nK~il~~------f~~P~tLt~~q~~v~~l~l~l~~~l-~~~~~----~-----~l--s~~~~~~ll~lgl 170 (269)
.+.....++.|+.++. -..|+.+..+.-..+.+++.+.+.. +..+. . +. +.+.+..++..|+
T Consensus 10 ~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (153)
T PF03151_consen 10 LFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGL 89 (153)
T ss_pred HHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHH
Confidence 4555667778887765 2238888888777777777665432 22110 0 00 1233445555566
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhc
Q 041338 171 AHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 171 l~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~ 233 (269)
+..+.+...+..++++++-.++++..+..+.+.++++++++|+++..+++|+++.++|+++-.
T Consensus 90 ~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 90 LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 666778899999999999999999999999999999999999999999999999999987643
No 46
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.28 E-value=3e-07 Score=83.27 Aligned_cols=154 Identities=19% Similarity=0.225 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHH-HHHHHHHHHHHHHHHhhc
Q 041338 108 YLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPL-AVAHTLGNLLTNISLVTV 186 (269)
Q Consensus 108 ~~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~l-gll~~~~~~l~n~AL~~v 186 (269)
|.+|....+..|-.. ++ |..+.-.|+.+-.+...++... ++.+-+-++..+.++.+ |+....+..+.++|++|.
T Consensus 47 ~ff~~~~vv~t~~~e--~~-p~e~a~~r~l~~mlit~pcliy--~~~~v~gp~g~R~~LiLRg~mG~tgvmlmyya~~~m 121 (346)
T KOG4510|consen 47 YFFNSCMVVSTKVLE--ND-PMELASFRLLVRMLITYPCLIY--YMQPVIGPEGKRKWLILRGFMGFTGVMLMYYALMYM 121 (346)
T ss_pred HHHhhHHHhhhhhhc--cC-hhHhhhhhhhhehhhhheEEEE--EeeeeecCCCcEEEEEeehhhhhhHHHHHHHHHhhc
Confidence 456665555555442 45 8888877765554444333111 11111112222333333 566667788999999999
Q ss_pred CHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcc-----cc---------ccccHHHHHHHHHHHH
Q 041338 187 NVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASL-----TE---------ATFNWTGFCSAMASNV 252 (269)
Q Consensus 187 svs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~-----~~---------~s~~~~G~~~alls~~ 252 (269)
+.+-+.+|..++|+|+.+++++++||+++....++..+.+.||+++.- ++ .+.+..|...++.+++
T Consensus 122 slaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~l 201 (346)
T KOG4510|consen 122 SLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVL 201 (346)
T ss_pred chhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHh
Confidence 999999999999999999999999999999999999999999999863 21 1224567777777777
Q ss_pred HHHHHHHHHHhhcc
Q 041338 253 TNQSRNVFSKKFMV 266 (269)
Q Consensus 253 ~~al~~V~~Kkll~ 266 (269)
+-+.--++.+++=+
T Consensus 202 f~asvyIilR~iGk 215 (346)
T KOG4510|consen 202 FGASVYIILRYIGK 215 (346)
T ss_pred hhhhHHHHHHHhhc
Confidence 76665565555533
No 47
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.27 E-value=4.7e-05 Score=71.87 Aligned_cols=123 Identities=12% Similarity=0.063 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHhhcC-------CcHHHHHHHHHHHHHHHHHHHHH-hhccC-C-------CCCCHHhHHHHHHHHHHHH
Q 041338 110 LNIYFNIFNKQVLKVF-------PYPTTVTAFQFGCGTVMIILMWT-LNLYA-R-------PKLTRSQFAVILPLAVAHT 173 (269)
Q Consensus 110 ~si~~~i~nK~il~~f-------~~P~tLt~~q~~v~~l~l~l~~~-l~~~~-~-------~~ls~~~~~~ll~lgll~~ 173 (269)
+....+++.|+.+++. + +..+..+++.++.+++++... ....+ . ...+...+..++...+...
T Consensus 205 ~~a~~~i~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~ 283 (350)
T PTZ00343 205 GSSLRSIFAKKTMKNKSEIGENLT-ASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSG 283 (350)
T ss_pred HHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHH
Confidence 3345667888887643 3 556667778888887765432 21100 0 0011111122222222233
Q ss_pred HHHHHHH----HHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhc
Q 041338 174 LGNLLTN----ISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 174 ~~~~l~n----~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~ 233 (269)
+.+.++| ++++++++..+++...+.|+++++++++++||+++..+++|.+++++|+.+..
T Consensus 284 l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs 347 (350)
T PTZ00343 284 VWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS 347 (350)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence 3444555 69999999999999999999999999999999999999999999999998754
No 48
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.25 E-value=2.5e-05 Score=71.81 Aligned_cols=129 Identities=19% Similarity=0.180 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHH---HHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHH
Q 041338 95 IQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFG---CGTVMIILMWTLNLYARPKLTRSQFAVILPLAVA 171 (269)
Q Consensus 95 ~~~~~~~~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~~q~~---v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll 171 (269)
++-+..+++..+-|.+ +.+.+|.. +++ |...++.|+. +++++....+ + +.+|. ..+..+..+..|++
T Consensus 151 ~~Gi~~~l~sg~~y~~---~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~--~-~~~~~-~~~~~~~~~~~Gi~ 220 (290)
T TIGR00776 151 KKGILLLLMSTIGYLV---YVVVAKAF--GVD-GLSVLLPQAIGMVIGGIIFNLGH--I-LAKPL-KKYAILLNILPGLM 220 (290)
T ss_pred hhHHHHHHHHHHHHHH---HHHHHHHc--CCC-cceehhHHHHHHHHHHHHHHHHH--h-cccch-HHHHHHHHHHHHHH
Confidence 4455555555555543 44567764 366 8888666654 3333332222 1 11222 23344445558888
Q ss_pred HHHHHHHHHHHHh-hcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHH----HHHHHHHHhhhhhc
Q 041338 172 HTLGNLLTNISLV-TVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLA----SSLVPIVGGVALAS 233 (269)
Q Consensus 172 ~~~~~~l~n~AL~-~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~----lgl~lii~GV~l~~ 233 (269)
+..++.++..+.+ +++++.+.++...+|+..+++++++++|+.+++++ +|.++++.|+.+..
T Consensus 221 ~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 221 WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 8778889999999 99999999999999999999999999999999999 99999999998864
No 49
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.91 E-value=0.0001 Score=60.30 Aligned_cols=71 Identities=21% Similarity=0.139 Sum_probs=61.7
Q ss_pred HHHHHHH-HHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHH--hhCCCCCHHHHHHHHHHHHhhhhhccc
Q 041338 165 ILPLAVA-HTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAAL--FLGEKPTIWLASSLVPIVGGVALASLT 235 (269)
Q Consensus 165 ll~lgll-~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l--~lgEr~t~~~~lgl~lii~GV~l~~~~ 235 (269)
++.+|++ +.+...+.+.++++.+++.+.-+-+..++++.+.++. ++||++++.+++|++++++|+.++..+
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 4556665 5567889999999999999999999998888888885 899999999999999999999998643
No 50
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.75 E-value=0.00083 Score=60.79 Aligned_cols=119 Identities=15% Similarity=0.155 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHHHHH-HHHHHHHHHhhcCHH
Q 041338 111 NIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVAHTL-GNLLTNISLVTVNVS 189 (269)
Q Consensus 111 si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll~~~-~~~l~n~AL~~vsvs 189 (269)
...|++..|.+=+.-|-+.+ +.+-|.+++++.+++-.. +-...-.+++-...-+.+|++.+. -+.+...++...+..
T Consensus 160 Wa~YIv~G~r~g~~~~g~~g-~a~gm~vAaviv~Pig~~-~ag~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~ 237 (292)
T COG5006 160 WALYIVLGQRAGRAEHGTAG-VAVGMLVAALIVLPIGAA-QAGPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPAR 237 (292)
T ss_pred HHHHHHHcchhcccCCCchH-HHHHHHHHHHHHhhhhhh-hcchhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChh
Confidence 34466677777655553444 456677888777654211 111111233444444556666544 467999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhh
Q 041338 190 FTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVAL 231 (269)
Q Consensus 190 ~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l 231 (269)
...++.++||.+..+.++++++|.+|..+|++++.++.+.+=
T Consensus 238 ~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG 279 (292)
T COG5006 238 TFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG 279 (292)
T ss_pred HHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999887663
No 51
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=97.69 E-value=3.1e-05 Score=70.64 Aligned_cols=134 Identities=13% Similarity=0.188 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc-cCCCCCCHHhHHHHHHHHHHHHHHHHHHHHHHhh-cCHHHHHHHhhhhHHHHHHHH
Q 041338 129 TTVTAFQFGCGTVMIILMWTLNL-YARPKLTRSQFAVILPLAVAHTLGNLLTNISLVT-VNVSFTHTIKAMEPFFTVLFA 206 (269)
Q Consensus 129 ~tLt~~q~~v~~l~l~l~~~l~~-~~~~~ls~~~~~~ll~lgll~~~~~~l~n~AL~~-vsvs~~~iikal~Pvftvils 206 (269)
..+|+.||.+-++--++.. .+. ..++++..+++. .+-..+-..+.+.|.++++ ++.+.+.++++-.++-+++++
T Consensus 34 NLITFaqFlFia~eGlif~-skf~~~k~kiplk~Y~---i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g 109 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFT-SKFFTVKPKIPLKDYA---ITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILG 109 (330)
T ss_pred eehHHHHHHHHHHhceeee-ccccccCCCCchhhhh---eehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHH
Confidence 4789999987766544321 111 123555444443 3333344557899999996 899999999999999999999
Q ss_pred HHhhCCCCCHHHHHHHHHHHHhhhhhccc---cc--------------ccc--HHHHHHHHHHHHHHHHHHHHHHhhcc
Q 041338 207 ALFLGEKPTIWLASSLVPIVGGVALASLT---EA--------------TFN--WTGFCSAMASNVTNQSRNVFSKKFMV 266 (269)
Q Consensus 207 ~l~lgEr~t~~~~lgl~lii~GV~l~~~~---~~--------------s~~--~~G~~~alls~~~~al~~V~~Kkll~ 266 (269)
++++|+|++.+++.+++++.+|+++++.. |. .+. ..|+.+...+-+..+.-.++++...+
T Consensus 110 ~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~ 188 (330)
T KOG1583|consen 110 WILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQ 188 (330)
T ss_pred HHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988642 11 011 26888888888888887777776654
No 52
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.64 E-value=0.001 Score=53.85 Aligned_cols=69 Identities=16% Similarity=0.365 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHHH-hhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcc
Q 041338 166 LPLAVAHTLGNLLTNISLVTVNVSFTHTI-KAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASL 234 (269)
Q Consensus 166 l~lgll~~~~~~l~n~AL~~vsvs~~~ii-kal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~ 234 (269)
+..-+++.....+...++++++++.+.-+ ....-+.+++.+.+++||++++.+++++.++++|+++...
T Consensus 34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 33445567778899999999999998877 4689999999999999999999999999999999988754
No 53
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.59 E-value=0.0031 Score=58.13 Aligned_cols=134 Identities=13% Similarity=0.248 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCC-cHHHHHHHHHHHHHHHHHHHHHh---hccC-CCC---CCHHhHHHHHHHHHHH
Q 041338 101 GGMFGLWYLLNIYFNIFNKQVLKVFP-YPTTVTAFQFGCGTVMIILMWTL---NLYA-RPK---LTRSQFAVILPLAVAH 172 (269)
Q Consensus 101 ~~l~~~W~~~si~~~i~nK~il~~f~-~P~tLt~~q~~v~~l~l~l~~~l---~~~~-~~~---ls~~~~~~ll~lgll~ 172 (269)
.+++.+...+......+.|++++.++ .|..+.++.-+++.++..+.... +... ..+ ..++.+..++..++..
T Consensus 156 ~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~ 235 (303)
T PF08449_consen 156 IILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTG 235 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHH
Confidence 44455555666777788999998653 27777777777777766543222 1111 000 1123455666667777
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcc
Q 041338 173 TLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASL 234 (269)
Q Consensus 173 ~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~ 234 (269)
..+..+.+.-.++.++-...++..+--+++++++.+++++++++.+|.|+++++.|..+-..
T Consensus 236 ~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~ 297 (303)
T PF08449_consen 236 ALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY 297 (303)
T ss_pred HHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence 77777777778999999999999999999999999999999999999999999999987654
No 54
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.57 E-value=0.0016 Score=59.69 Aligned_cols=112 Identities=25% Similarity=0.272 Sum_probs=90.8
Q ss_pred CCCCCCH--HhHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHh-hhhHHHHHHHHHHhhCCCCCHHHH----HHHHHH
Q 041338 153 ARPKLTR--SQFAVILPLAVAHTLGNLLTNISLVTVNVSFTHTIK-AMEPFFTVLFAALFLGEKPTIWLA----SSLVPI 225 (269)
Q Consensus 153 ~~~~ls~--~~~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~iik-al~Pvftvils~l~lgEr~t~~~~----lgl~li 225 (269)
.+|..+. ..+..-+.-|++.+.+...++.|++++.+|.+.=+. .+.-+.+.+.+++++||..+...+ ++++++
T Consensus 34 ~~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~li 113 (269)
T PF06800_consen 34 RQPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLI 113 (269)
T ss_pred hCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHH
Confidence 4455553 667777788999999999999999999999887555 568888999999999999987665 488899
Q ss_pred HHhhhhhcccccc--------ccHHHHHHHHHHHHHHHHHHHHHHhh
Q 041338 226 VGGVALASLTEAT--------FNWTGFCSAMASNVTNQSRNVFSKKF 264 (269)
Q Consensus 226 i~GV~l~~~~~~s--------~~~~G~~~alls~~~~al~~V~~Kkl 264 (269)
++|+.+.+..|.+ ....|+...+++.+.|..|.+..|-.
T Consensus 114 iiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~ 160 (269)
T PF06800_consen 114 IIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF 160 (269)
T ss_pred HHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999998875421 12579999999999999999987753
No 55
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.51 E-value=0.0024 Score=50.83 Aligned_cols=66 Identities=15% Similarity=0.194 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHH-hhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcc
Q 041338 169 AVAHTLGNLLTNISLVTVNVSFTHTI-KAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASL 234 (269)
Q Consensus 169 gll~~~~~~l~n~AL~~vsvs~~~ii-kal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~ 234 (269)
-+++.+...+...+++++|++.+.-+ ....-+.+++.+++++||++++.+++|+.++++|+++...
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 34456677788999999999998877 4578899999999999999999999999999999998754
No 56
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.41 E-value=0.0064 Score=48.38 Aligned_cols=67 Identities=10% Similarity=0.053 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHHH-hhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhh
Q 041338 166 LPLAVAHTLGNLLTNISLVTVNVSFTHTI-KAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALA 232 (269)
Q Consensus 166 l~lgll~~~~~~l~n~AL~~vsvs~~~ii-kal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~ 232 (269)
+..-+.+...+.+...+++++|++.+--+ ...--+.+++.+.+++||++++.+++++.++++|++..
T Consensus 39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 33444566677888999999999987544 44788889999999999999999999999999999875
No 57
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.39 E-value=0.005 Score=48.66 Aligned_cols=67 Identities=16% Similarity=0.116 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHHHHh-hhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhc
Q 041338 167 PLAVAHTLGNLLTNISLVTVNVSFTHTIK-AMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 167 ~lgll~~~~~~l~n~AL~~vsvs~~~iik-al~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~ 233 (269)
..-+++...+.+...+++++|++.+.-+- ..--+.+++.+++++||++++.+++++.++++|++...
T Consensus 34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 33445667788889999999999876554 47889999999999999999999999999999999864
No 58
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.33 E-value=0.012 Score=55.58 Aligned_cols=140 Identities=15% Similarity=0.137 Sum_probs=88.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHH-HHhhccCCCCC--CHHhHHHHHH
Q 041338 91 PSAAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILM-WTLNLYARPKL--TRSQFAVILP 167 (269)
Q Consensus 91 ~~~~~~~~~~~~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~-~~l~~~~~~~l--s~~~~~~ll~ 167 (269)
+.++...+.....+.++.. .+++.|+.+++.+ +......--+++.++..+. ..++...-.++ +.+.+..++.
T Consensus 164 ~~~i~GDll~l~~a~lya~----~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~ 238 (334)
T PF06027_consen 164 SNPILGDLLALLGAILYAV----SNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVG 238 (334)
T ss_pred CccchhHHHHHHHHHHHHH----HHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHH
Confidence 4455655555555555544 4456788887776 4433333333444444332 22222111222 2232222222
Q ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccc
Q 041338 168 LAVAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLT 235 (269)
Q Consensus 168 lgll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~ 235 (269)
-++.......+....+++.++.+..+-..+..+++++++.+++|+++++.-++|.+++++|+++....
T Consensus 239 ~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 239 YALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA 306 (334)
T ss_pred HHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence 22222333457788888999988888888899999999999999999999999999999999987653
No 59
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=97.22 E-value=8.7e-06 Score=73.55 Aligned_cols=110 Identities=13% Similarity=0.126 Sum_probs=92.4
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccccc-
Q 041338 159 RSQFAVILPLAVAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEA- 237 (269)
Q Consensus 159 ~~~~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~- 237 (269)
...|+..+++|++-.-++.+-..|.||++....+++-+-..+.+++++|++++.|+++.+..|+++.++||.++...|.
T Consensus 75 ~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ 154 (336)
T KOG2766|consen 75 KAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVH 154 (336)
T ss_pred HHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeec
Confidence 3457777888888777788888899999999999999988888999999999999999999999999999998765442
Q ss_pred ------ccc-HHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 041338 238 ------TFN-WTGFCSAMASNVTNQSRNVFSKKFMVRK 268 (269)
Q Consensus 238 ------s~~-~~G~~~alls~~~~al~~V~~Kkll~~~ 268 (269)
+-| .+|.+++++++-+|+..|+..+-+.++.
T Consensus 155 agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~ 192 (336)
T KOG2766|consen 155 AGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA 192 (336)
T ss_pred cccccCCCCCccCcEEEEecceeeeeccccHHHHHhcC
Confidence 123 5899999999999999988777666654
No 60
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.15 E-value=0.018 Score=52.86 Aligned_cols=130 Identities=18% Similarity=0.147 Sum_probs=83.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHhHHHHHHHHHHH
Q 041338 93 AAIQTLQLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLTRSQFAVILPLAVAH 172 (269)
Q Consensus 93 ~~~~~~~~~~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls~~~~~~ll~lgll~ 172 (269)
..++.+...++-.+-|.. |....|.. +.+ |+...+-| .+|.++..+++.... +++..+++ .+.-+.-|+++
T Consensus 135 ~~~kgi~~Ll~stigy~~---Y~~~~~~~--~~~-~~~~~lPq-aiGm~i~a~i~~~~~-~~~~~~k~-~~~nil~G~~w 205 (269)
T PF06800_consen 135 NMKKGILALLISTIGYWI---YSVIPKAF--HVS-GWSAFLPQ-AIGMLIGAFIFNLFS-KKPFFEKK-SWKNILTGLIW 205 (269)
T ss_pred chhhHHHHHHHHHHHHHH---HHHHHHhc--CCC-hhHhHHHH-HHHHHHHHHHHhhcc-cccccccc-hHHhhHHHHHH
Confidence 345545544444443332 44455552 344 66666555 344444433322211 22222233 34445689999
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHH----HHHHHHHHhhhh
Q 041338 173 TLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLA----SSLVPIVGGVAL 231 (269)
Q Consensus 173 ~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~----lgl~lii~GV~l 231 (269)
..++.++..|.+.+.++..-.+..+..+...+.+.+++||+=+++++ +|+++++.|.++
T Consensus 206 ~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 206 GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999887754 556666666543
No 61
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.13 E-value=0.0041 Score=49.20 Aligned_cols=68 Identities=22% Similarity=0.205 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHH-HHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcc
Q 041338 167 PLAVAHTLGNLLTNISLVTVNVSFTH-TIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASL 234 (269)
Q Consensus 167 ~lgll~~~~~~l~n~AL~~vsvs~~~-iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~ 234 (269)
..-+++...+.+...+++++|++.+- +-...-.+.+++.+++++||+.+..+++++.++++|++..-.
T Consensus 35 l~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 35 LTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 34445666788889999999999864 556678899999999999999999999999999999987643
No 62
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=96.98 E-value=0.063 Score=49.56 Aligned_cols=124 Identities=15% Similarity=0.072 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHH-HHhhccCC-CC-CCHHhHHHHHHHHHHHHHHHHHHHHHHhh
Q 041338 109 LLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILM-WTLNLYAR-PK-LTRSQFAVILPLAVAHTLGNLLTNISLVT 185 (269)
Q Consensus 109 ~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~-~~l~~~~~-~~-ls~~~~~~ll~lgll~~~~~~l~n~AL~~ 185 (269)
+++.+..-.-|+.+ ..+ +.+=-..++..-....++. +....... .. -....+..+...|...+....++..|-+.
T Consensus 157 a~sf~~Ygl~RK~~-~v~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~ 234 (293)
T COG2962 157 ALSFGLYGLLRKKL-KVD-ALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKR 234 (293)
T ss_pred HHHHHHHHHHHHhc-CCc-hHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhc
Confidence 33433333344433 244 5555556666555544332 21211111 00 12345666667778888888899999999
Q ss_pred cCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcc
Q 041338 186 VNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASL 234 (269)
Q Consensus 186 vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~ 234 (269)
++.+...++.+.+|....+++.+++||.++..++.+.+++-+|+++...
T Consensus 235 lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~ 283 (293)
T COG2962 235 LPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI 283 (293)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988764
No 63
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.83 E-value=0.014 Score=44.86 Aligned_cols=55 Identities=15% Similarity=0.165 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHH-hhhhHHHHHHHHHHhhCCCCCHHHHHHHHHH
Q 041338 171 AHTLGNLLTNISLVTVNVSFTHTI-KAMEPFFTVLFAALFLGEKPTIWLASSLVPI 225 (269)
Q Consensus 171 l~~~~~~l~n~AL~~vsvs~~~ii-kal~Pvftvils~l~lgEr~t~~~~lgl~li 225 (269)
++.....+...++++++++.+.-+ ..+..+.+++.+.+++||+++..+++|+.++
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 566778899999999999998554 5689999999999999999999999998764
No 64
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.79 E-value=0.097 Score=43.17 Aligned_cols=115 Identities=16% Similarity=0.200 Sum_probs=80.2
Q ss_pred HHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCCHHhHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHH
Q 041338 116 IFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYA-RPKLTRSQFAVILPLAVAHTLGNLLTNISLVTVNVSFTHTI 194 (269)
Q Consensus 116 i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~-~~~ls~~~~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~ii 194 (269)
.+|-++-+....|+.-+++-+.++.+.+.+.+.....+ ..+....+|+.++ -|++......+.++...++.++.+.++
T Consensus 18 ~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~~~l 96 (138)
T PF04657_consen 18 AFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALTTIL 96 (138)
T ss_pred HHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 34555444444599999999999998887665433221 1122222344433 566666677788889999988888776
Q ss_pred hhh-hHHHHHHHHHH----hhCCCCCHHHHHHHHHHHHhhhh
Q 041338 195 KAM-EPFFTVLFAAL----FLGEKPTIWLASSLVPIVGGVAL 231 (269)
Q Consensus 195 kal-~Pvftvils~l----~lgEr~t~~~~lgl~lii~GV~l 231 (269)
.-. +-+..++++.+ .-++++++++.+|++++++|+.+
T Consensus 97 ~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 97 IVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 665 67777788876 35688999999999999999864
No 65
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.67 E-value=0.026 Score=49.44 Aligned_cols=65 Identities=9% Similarity=0.037 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhh
Q 041338 167 PLAVAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVAL 231 (269)
Q Consensus 167 ~lgll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l 231 (269)
.+.+..+.+..+..+.+++.+.....++..++++++.+++.++++|+++..+++|..+++.|+.+
T Consensus 157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 34455666667889999999999999999999999999999999999999999999999998754
No 66
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.60 E-value=0.0022 Score=58.60 Aligned_cols=76 Identities=20% Similarity=0.322 Sum_probs=68.4
Q ss_pred CHHhHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhc
Q 041338 158 TRSQFAVILPLAVAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 158 s~~~~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~ 233 (269)
.++|++.+.-+|++..++.++-.+++|-=-++-.++.+++.-+|.++...+|+++.||++.|.|.++++...+.+.
T Consensus 249 cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a 324 (346)
T KOG4510|consen 249 CGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVA 324 (346)
T ss_pred cccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHH
Confidence 5778888889999988889999999999999999999999999999999999999999999999888877666543
No 67
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.53 E-value=0.0062 Score=53.38 Aligned_cols=84 Identities=17% Similarity=0.150 Sum_probs=68.8
Q ss_pred cCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccccc---------------------------c
Q 041338 186 VNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEA---------------------------T 238 (269)
Q Consensus 186 vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~---------------------------s 238 (269)
++++.....++..++++++.++.+.+|+++..++++.++++.|+.....++. +
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 5677888899999999999999999999999999999999999875322110 1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 041338 239 FNWTGFCSAMASNVTNQSRNVFSKKFMVRKE 269 (269)
Q Consensus 239 ~~~~G~~~alls~~~~al~~V~~Kkll~~~~ 269 (269)
..+.|....+.+.++.+...++.++.++++|
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~ 112 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGD 112 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCC
Confidence 2367888888889999999999999887754
No 68
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.42 E-value=0.008 Score=55.85 Aligned_cols=68 Identities=25% Similarity=0.297 Sum_probs=60.7
Q ss_pred HHHHHH-HHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhc
Q 041338 166 LPLAVA-HTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 166 l~lgll-~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~ 233 (269)
...|++ +.++..+...|+.+.|.+..+-+.++.-++.++++..++|||++++.+.|.+++++|++++.
T Consensus 53 W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 53 WWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 345544 55677899999999999999999999999999999999999999999999999999988754
No 69
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=96.25 E-value=0.1 Score=46.41 Aligned_cols=50 Identities=8% Similarity=0.129 Sum_probs=44.2
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHh
Q 041338 160 SQFAVILPLAVAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALF 209 (269)
Q Consensus 160 ~~~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~ 209 (269)
++|..++.+|++...++.+.+.++++.+++.++++.+++|+++++++.++
T Consensus 206 ~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 206 PIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 46777778887766688999999999999999999999999999999764
No 70
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.19 E-value=0.016 Score=46.40 Aligned_cols=70 Identities=24% Similarity=0.272 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHH-hhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhh
Q 041338 162 FAVILPLAVAHTLGNLLTNISLVTVNVSFTHTI-KAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALA 232 (269)
Q Consensus 162 ~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~ii-kal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~ 232 (269)
++.++|..+ +..+.+.++..+.+.+.|.+.-+ +++.=+||++.++++.+|..+++.++|++++++|+.++
T Consensus 42 ~~y~ipf~l-Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 42 PKYIIPFLL-NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 445555544 44557788889999999998877 58899999999988888888999999999999999875
No 71
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.60 E-value=0.79 Score=43.56 Aligned_cols=102 Identities=15% Similarity=0.202 Sum_probs=82.3
Q ss_pred CHHhHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHh-hhhHHHHHHHHHHhhCCCC---C----HHHHHHHHHHHHhh
Q 041338 158 TRSQFAVILPLAVAHTLGNLLTNISLVTVNVSFTHTIK-AMEPFFTVLFAALFLGEKP---T----IWLASSLVPIVGGV 229 (269)
Q Consensus 158 s~~~~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~iik-al~Pvftvils~l~lgEr~---t----~~~~lgl~lii~GV 229 (269)
+...+..-+.-|++.+.++.++..+++++.+|.+.-+. .+.-++..++..++++|-. + .....|++++++|+
T Consensus 69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi 148 (345)
T PRK13499 69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV 148 (345)
T ss_pred CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence 45566666778889999999999999999999987554 5788999999999999765 2 33568899999999
Q ss_pred hhhcc----ccc--------ccc-HHHHHHHHHHHHHHHHHHH
Q 041338 230 ALASL----TEA--------TFN-WTGFCSAMASNVTNQSRNV 259 (269)
Q Consensus 230 ~l~~~----~~~--------s~~-~~G~~~alls~~~~al~~V 259 (269)
++... .|. +.| .+|++.++++.+.++.|+.
T Consensus 149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~ 191 (345)
T PRK13499 149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSF 191 (345)
T ss_pred HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHH
Confidence 99876 332 133 5899999999999999994
No 72
>PRK13499 rhamnose-proton symporter; Provisional
Probab=94.96 E-value=1.4 Score=41.88 Aligned_cols=69 Identities=13% Similarity=0.102 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHH---Hh-hhhHHHHHHHHHHhhCCCCC------HHHHHHHHHHHHhhhhhccc
Q 041338 166 LPLAVAHTLGNLLTNISLVTVNVSFTHT---IK-AMEPFFTVLFAALFLGEKPT------IWLASSLVPIVGGVALASLT 235 (269)
Q Consensus 166 l~lgll~~~~~~l~n~AL~~vsvs~~~i---ik-al~Pvftvils~l~lgEr~t------~~~~lgl~lii~GV~l~~~~ 235 (269)
+.-|+....++.++.++-.++.+....+ +. ++.-++..+.+. ++||+=+ +..+++++++++|..+...+
T Consensus 264 ~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 264 ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 4556677778888888888775554444 55 555566666666 6998876 45678889999998887654
No 73
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=94.92 E-value=0.12 Score=48.44 Aligned_cols=132 Identities=15% Similarity=0.060 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh----cCCcHHHHHHHHHHHHHHHHH-HHHHhhccCCC------CCCHHhHHHHHHHH
Q 041338 101 GGMFGLWYLLNIYFNIFNKQVLK----VFPYPTTVTAFQFGCGTVMII-LMWTLNLYARP------KLTRSQFAVILPLA 169 (269)
Q Consensus 101 ~~l~~~W~~~si~~~i~nK~il~----~f~~P~tLt~~q~~v~~l~l~-l~~~l~~~~~~------~ls~~~~~~ll~lg 169 (269)
...+..+......-+++.|.++. +.+ ++.+..++--++.++++ +.+........ ..+.. ....+..+
T Consensus 165 ~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s 242 (316)
T KOG1441|consen 165 FISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLNS 242 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHHH
Confidence 44445555555667888999884 366 88888887777777776 54332111110 01111 22333444
Q ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcc
Q 041338 170 VAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASL 234 (269)
Q Consensus 170 ll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~ 234 (269)
++.-+.+...++.++.+++-++++...+--+++++.++++++++.++...+|.++.++|+.+-..
T Consensus 243 v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 243 VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 55555678899999999999999999999999999999999999999999999999999998653
No 74
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=94.72 E-value=0.47 Score=44.24 Aligned_cols=131 Identities=14% Similarity=0.143 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHH-HHhhccC----CC-----CCCHHhHHHHHHH
Q 041338 99 QLGGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILM-WTLNLYA----RP-----KLTRSQFAVILPL 168 (269)
Q Consensus 99 ~~~~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~-~~l~~~~----~~-----~ls~~~~~~ll~l 168 (269)
.-..++..+.++-...+...+.+++.+. ++.+|++++.=+...+ ....... .+ +.+++.++.++.+
T Consensus 172 ~G~~Ll~~~L~fDgfTn~tQd~lf~~~k----~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~ 247 (327)
T KOG1581|consen 172 IGILLLFGYLLFDGFTNATQDSLFKKYK----VSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLY 247 (327)
T ss_pred HhHHHHHHHHHHHhhHHhHHHHHhccCC----ccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHH
Confidence 3355666666666667778888888665 5666766654333221 1111111 11 2246778889999
Q ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhc
Q 041338 169 AVAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 169 gll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~ 233 (269)
+.+.+.+..+-+.-++.-.+-...+|.-+==+++.+++.+.++.+.+..+|+|..++++|+.+-.
T Consensus 248 s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~ 312 (327)
T KOG1581|consen 248 STCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEI 312 (327)
T ss_pred HHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHH
Confidence 99988887655555565544455567777788899999999999999999999999999987643
No 75
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=94.63 E-value=2.4 Score=38.14 Aligned_cols=116 Identities=13% Similarity=0.144 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHH-HHhhccCCCCCC--HHhHH-HHHHHHHHHHHHHHHHHHHHh
Q 041338 109 LLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMIILM-WTLNLYARPKLT--RSQFA-VILPLAVAHTLGNLLTNISLV 184 (269)
Q Consensus 109 ~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~-~~l~~~~~~~ls--~~~~~-~ll~lgll~~~~~~l~n~AL~ 184 (269)
.++..-.+++.+++++-+.|+.+--.|+.+.++++.+. ..........-. .+.+- ..+.+-+.++.+-++...-+|
T Consensus 124 ~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~K 203 (244)
T PF04142_consen 124 FLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLK 203 (244)
T ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHHHHHHhhHHHHHHHH
Confidence 45666678899999876557777777877665555332 222222111100 11111 122333456667778888899
Q ss_pred hcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHH
Q 041338 185 TVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVP 224 (269)
Q Consensus 185 ~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~l 224 (269)
|.+.-.=....+.+.+.+.++++++++.+++....+|..+
T Consensus 204 yadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~ 243 (244)
T PF04142_consen 204 YADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL 243 (244)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence 9998888888889999999999999999999998887643
No 76
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.15 E-value=0.14 Score=48.00 Aligned_cols=67 Identities=16% Similarity=0.169 Sum_probs=59.8
Q ss_pred HHHHH-HHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhc
Q 041338 167 PLAVA-HTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 167 ~lgll-~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~ 233 (269)
..|++ +..|-...+.|+.+.|.+..+=+-++.-++.++++..+++|++++...+|+++.++|-.+..
T Consensus 68 w~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV 135 (335)
T KOG2922|consen 68 WAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIV 135 (335)
T ss_pred HHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEE
Confidence 35555 56688899999999999999999999999999999999999999999999999999976654
No 77
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.01 E-value=8.6 Score=32.34 Aligned_cols=116 Identities=12% Similarity=0.169 Sum_probs=69.8
Q ss_pred HHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhhccCCCCCC---HHhHHHHHHHHHHHHHHHHHHHHHHhhcCHHHH-
Q 041338 116 IFNKQVLKVFPYPTTVTAFQFGCGTVMIILMWTLNLYARPKLT---RSQFAVILPLAVAHTLGNLLTNISLVTVNVSFT- 191 (269)
Q Consensus 116 i~nK~il~~f~~P~tLt~~q~~v~~l~l~l~~~l~~~~~~~ls---~~~~~~ll~lgll~~~~~~l~n~AL~~vsvs~~- 191 (269)
-+|-++-+....|+.-.+.-+.+|++++..+.... .+.+... ...|+.++ -|++.....+........+.+..+
T Consensus 22 ~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~-~~~~~~a~~~~~pwW~~~-GG~lGa~~vt~s~~l~p~lGa~~t~ 99 (150)
T COG3238 22 AINGRLARYLGSPLLASLISFLVGTVLLLILLLIK-QGHPGLAAVASAPWWAWI-GGLLGAIFVTSSILLAPRLGAATTI 99 (150)
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHh-cCCCchhhccCCchHHHH-ccchhhhhhhhhHHhccchhHHHHH
Confidence 35555555555699888999999998887654442 3333332 22344433 333333333333444444444443
Q ss_pred HHHhhhhHHHHHHHHHHh-h---CCCCCHHHHHHHHHHHHhhhhhc
Q 041338 192 HTIKAMEPFFTVLFAALF-L---GEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 192 ~iikal~Pvftvils~l~-l---gEr~t~~~~lgl~lii~GV~l~~ 233 (269)
.++-+-.-+..+++..+= + ++++++.+++|++++++|+.++.
T Consensus 100 ~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 100 ALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred HHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 344455677777777663 2 37889999999999999966553
No 78
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=88.98 E-value=0.86 Score=41.36 Aligned_cols=72 Identities=17% Similarity=0.176 Sum_probs=61.0
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhh
Q 041338 160 SQFAVILPLAVAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVAL 231 (269)
Q Consensus 160 ~~~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l 231 (269)
..|+.+..+|+..+++.++-+.-..+-++-.-+++.-+--+|+++.++++++..++.++|+|.++++.|...
T Consensus 239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 457778888888888888777777777777777777778899999999999999999999999999988765
No 79
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=88.28 E-value=7.7 Score=37.41 Aligned_cols=78 Identities=13% Similarity=0.222 Sum_probs=63.0
Q ss_pred HHhHHHHHHHHHHHHH-HHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcccc
Q 041338 159 RSQFAVILPLAVAHTL-GNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTE 236 (269)
Q Consensus 159 ~~~~~~ll~lgll~~~-~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~ 236 (269)
..+...++..++..+. .=+++.+|....++-.+++-..++....++...++-++.+++..++|.+++++|-+++.+.+
T Consensus 314 ~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 314 STQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred CceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 3445555566655544 45788899999998888888888777799999999999999999999999999999887643
No 80
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=87.81 E-value=0.48 Score=43.12 Aligned_cols=73 Identities=22% Similarity=0.267 Sum_probs=58.0
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHH----HHHHHHHHhhhh
Q 041338 159 RSQFAVILPLAVAHTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLA----SSLVPIVGGVAL 231 (269)
Q Consensus 159 ~~~~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~----lgl~lii~GV~l 231 (269)
.++.+.-+..|+..+.++.++..|-+.+.+++.-.+..+.-+...+...+++|||=|.+++ .|+++++.|..+
T Consensus 206 ~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~ 282 (288)
T COG4975 206 NKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL 282 (288)
T ss_pred HHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence 3444555667899999999999999999988888888888888999999999999998876 455555555444
No 81
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=87.28 E-value=15 Score=35.01 Aligned_cols=103 Identities=20% Similarity=0.273 Sum_probs=76.0
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHH-hhhhHHHHHHHHHHhhCC-------CCCHHHHHHHHHHHHhhh
Q 041338 159 RSQFAVILPLAVAHTLGNLLTNISLVTVNVSFTHTI-KAMEPFFTVLFAALFLGE-------KPTIWLASSLVPIVGGVA 230 (269)
Q Consensus 159 ~~~~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~ii-kal~Pvftvils~l~lgE-------r~t~~~~lgl~lii~GV~ 230 (269)
.+.+......|++...+.+.+-.+++|+.+|..+-| ..+.-++..++-.++.++ +-....++|+++.++|++
T Consensus 70 ~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIa 149 (344)
T PF06379_consen 70 ASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIA 149 (344)
T ss_pred hhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHH
Confidence 345666677888888888899999999999887644 446666666666665443 223567899999999999
Q ss_pred hhcc----cc-------ccccH-HHHHHHHHHHHHHHHHHHHH
Q 041338 231 LASL----TE-------ATFNW-TGFCSAMASNVTNQSRNVFS 261 (269)
Q Consensus 231 l~~~----~~-------~s~~~-~G~~~alls~~~~al~~V~~ 261 (269)
+... +| .++|. +|++.++++.+..+..++-.
T Consensus 150 i~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~ 192 (344)
T PF06379_consen 150 ICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGL 192 (344)
T ss_pred HHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 8763 12 13443 89999999999999988754
No 82
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=86.50 E-value=12 Score=33.97 Aligned_cols=121 Identities=8% Similarity=0.053 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHhh--cCCcHHHHHHHHHHHHHHHHHHH-HHhhccCCC----CCCHHhHHHHHHHHHHHHHHHHHHHH
Q 041338 109 LLNIYFNIFNKQVLK--VFPYPTTVTAFQFGCGTVMIILM-WTLNLYARP----KLTRSQFAVILPLAVAHTLGNLLTNI 181 (269)
Q Consensus 109 ~~si~~~i~nK~il~--~f~~P~tLt~~q~~v~~l~l~l~-~~l~~~~~~----~ls~~~~~~ll~lgll~~~~~~l~n~ 181 (269)
..+..+.+..|+..+ ++. -..-.++.-..+..+++.+ .....+... .++.+....+++-|++..+...+..|
T Consensus 165 lssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saW 243 (309)
T COG5070 165 LSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAW 243 (309)
T ss_pred HhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccce
Confidence 344555566666554 444 3344566666666655443 233322221 12334455666666666666779999
Q ss_pred HHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhh
Q 041338 182 SLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVA 230 (269)
Q Consensus 182 AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~ 230 (269)
.+.-.+...++++.++.-.-..+.+.++++|..++....++++.....+
T Consensus 244 cvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~ 292 (309)
T COG5070 244 CVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGA 292 (309)
T ss_pred eEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHH
Confidence 9999999999999999988899999999999999999988877664433
No 83
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=84.17 E-value=40 Score=32.17 Aligned_cols=123 Identities=11% Similarity=0.116 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHH-HHHHHhhccCCCCCCH---H-hHHHHHHHHHHHHHHHHHHHHHHh
Q 041338 110 LNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMI-ILMWTLNLYARPKLTR---S-QFAVILPLAVAHTLGNLLTNISLV 184 (269)
Q Consensus 110 ~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l-~l~~~l~~~~~~~ls~---~-~~~~ll~lgll~~~~~~l~n~AL~ 184 (269)
++....++..++++.-+-+..+-=.|+.+-.++. ++.......++.. .. + .-+..+.+-+.++.+-.+...-++
T Consensus 194 ~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~-~~gff~G~s~~vw~vVl~~a~gGLlvs~v~K 272 (345)
T KOG2234|consen 194 LSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAIN-EYGFFYGYSSIVWLVVLLNAVGGLLVSLVMK 272 (345)
T ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccc-cCCccccccHHHHHHHHHHhccchhHHHHHH
Confidence 4555567888888765546666666766444433 3322221111111 10 1 112223334445556666667778
Q ss_pred hcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhc
Q 041338 185 TVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 185 ~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~ 233 (269)
|.+--+-....++..+++.+.++.+++.++|..-.+|..+++..+.+-.
T Consensus 273 yADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~ 321 (345)
T KOG2234|consen 273 YADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYS 321 (345)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhh
Confidence 8776666666778899999999999999999999999999988888765
No 84
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=82.06 E-value=24 Score=28.04 Aligned_cols=55 Identities=18% Similarity=0.240 Sum_probs=36.1
Q ss_pred HHHHHHhhcCHHHHHHHhhh-hHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhh
Q 041338 178 LTNISLVTVNVSFTHTIKAM-EPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALA 232 (269)
Q Consensus 178 l~n~AL~~vsvs~~~iikal-~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~ 232 (269)
..-.+.+.-+.+--.++.=. +-..-+.++.+++||++++....|.+.++++|.++
T Consensus 51 ANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 51 ANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred chhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 44455555444433333322 23334567888999999999999999998887654
No 85
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=80.37 E-value=0.18 Score=45.76 Aligned_cols=111 Identities=22% Similarity=0.159 Sum_probs=83.8
Q ss_pred CCCCCCHHhHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHh-hhhHHHHHHHHHHhhCCCCCHHHH----HHHHHHHH
Q 041338 153 ARPKLTRSQFAVILPLAVAHTLGNLLTNISLVTVNVSFTHTIK-AMEPFFTVLFAALFLGEKPTIWLA----SSLVPIVG 227 (269)
Q Consensus 153 ~~~~ls~~~~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~iik-al~Pvftvils~l~lgEr~t~~~~----lgl~lii~ 227 (269)
..|.++...+..-+.-|++.+.+...++.|.+++.+|.+.=+. .+.-+-+.+++++.++|..+..+. .++++++.
T Consensus 50 ~~p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAlilivi 129 (288)
T COG4975 50 VSPELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVI 129 (288)
T ss_pred ecCccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHH
Confidence 4566677777666777888889999999999999999886544 467778889999999999987754 67888999
Q ss_pred hhhhhccccc--------cccHHHHHHHHHHHHHHHHHHHHHHh
Q 041338 228 GVALASLTEA--------TFNWTGFCSAMASNVTNQSRNVFSKK 263 (269)
Q Consensus 228 GV~l~~~~~~--------s~~~~G~~~alls~~~~al~~V~~Kk 263 (269)
|+.+.++.|. +.--.|+...+.+.+.|..|-|..+.
T Consensus 130 G~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~ 173 (288)
T COG4975 130 GIYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQL 173 (288)
T ss_pred hheEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeecc
Confidence 9999887542 11136777777777777777665443
No 86
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=79.08 E-value=22 Score=33.43 Aligned_cols=128 Identities=13% Similarity=0.045 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHHHhhc--CCcHHHHHHHHHHHHHHHHHHHH-HhhccC-----CCCCCHHhHHHHHHHHHHHHH-HH
Q 041338 106 LWYLLNIYFNIFNKQVLKV--FPYPTTVTAFQFGCGTVMIILMW-TLNLYA-----RPKLTRSQFAVILPLAVAHTL-GN 176 (269)
Q Consensus 106 ~W~~~si~~~i~nK~il~~--f~~P~tLt~~q~~v~~l~l~l~~-~l~~~~-----~~~ls~~~~~~ll~lgll~~~-~~ 176 (269)
..-.+...+..+.|+..+. +. -+.+.++.-+.....+.+.+ ..+..+ .+.-........+.++.++.. ..
T Consensus 164 ~n~~~~a~~~v~~kk~vd~~~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~is 242 (314)
T KOG1444|consen 164 ANCLTTAAFVVYVKKSVDSANLN-KFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGIS 242 (314)
T ss_pred HHHHHHHHHHHHHHHhhcccccc-ceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHH
Confidence 3334556667788888773 22 33345555555554443332 222111 111111122333445544444 46
Q ss_pred HHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcc
Q 041338 177 LLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASL 234 (269)
Q Consensus 177 ~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~ 234 (269)
++..+.....|+-.+++.-...-..+.+...++.+++.++....|+.+.++|-++-.+
T Consensus 243 y~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~ 300 (314)
T KOG1444|consen 243 YTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY 300 (314)
T ss_pred HHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence 7899999999998888888777777888888888899999999999988888766543
No 87
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=61.82 E-value=78 Score=24.96 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=26.8
Q ss_pred HHHHHHHhhCCCCCHHHHHHHHHHHHhhhhh
Q 041338 202 TVLFAALFLGEKPTIWLASSLVPIVGGVALA 232 (269)
Q Consensus 202 tvils~l~lgEr~t~~~~lgl~lii~GV~l~ 232 (269)
-+.++.+.++|.+++..+.+..++.+|+.++
T Consensus 83 Fv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 83 FVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 3567889999999999999999999988765
No 88
>PRK02237 hypothetical protein; Provisional
Probab=51.16 E-value=45 Score=26.57 Aligned_cols=39 Identities=15% Similarity=0.137 Sum_probs=32.4
Q ss_pred hhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcc
Q 041338 196 AMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASL 234 (269)
Q Consensus 196 al~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~ 234 (269)
....+...+..+.+-|++|++..+.|..+.++|+.++..
T Consensus 67 GvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 67 GVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 345555667788889999999999999999999988754
No 89
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=50.98 E-value=96 Score=29.05 Aligned_cols=124 Identities=15% Similarity=0.196 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHhhcCC-cHHHHHHH-HHHHHHHHHHHHH------HhhccCCCCCCHHhHHHHHHHHHHHHHHH-HHH
Q 041338 109 LLNIYFNIFNKQVLKVFP-YPTTVTAF-QFGCGTVMIILMW------TLNLYARPKLTRSQFAVILPLAVAHTLGN-LLT 179 (269)
Q Consensus 109 ~~si~~~i~nK~il~~f~-~P~tLt~~-q~~v~~l~l~l~~------~l~~~~~~~ls~~~~~~ll~lgll~~~~~-~l~ 179 (269)
..+..+.+++....+.+. .|-.-.++ |++ .....+++. .....+.++..-...-..+|...++.+.+ ..+
T Consensus 174 ~~sa~mgiyqE~~Y~kyGKh~~EalFytH~L-sLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Q 252 (330)
T KOG1583|consen 174 LLSAYMGIYQETTYQKYGKHWKEALFYTHFL-SLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQ 252 (330)
T ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHh-ccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHH
Confidence 566777888888888652 24444444 332 222211110 00011111110000111145555554433 355
Q ss_pred HHHHhhcCH-------HHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhc
Q 041338 180 NISLVTVNV-------SFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 180 n~AL~~vsv-------s~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~ 233 (269)
+...+.+-. =+++++..+-=++..++|.+.++..++++.|+|..+++.|.++..
T Consensus 253 y~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 253 YFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred HHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 555554322 122233344456788999999999999999999999999988764
No 90
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=50.51 E-value=25 Score=28.07 Aligned_cols=71 Identities=18% Similarity=0.249 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHH-HhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhc
Q 041338 162 FAVILPLAVAHTLGNLLTNISLVTVNVSFTHT-IKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 162 ~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~i-ikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~ 233 (269)
|...+|..+ .-.+..+++.-+++.+.+.+.= -.+++-.|+.+.+..+.-|....+.++|..++++|+.++.
T Consensus 53 w~Y~iPFll-NqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 53 WEYLIPFLL-NQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHHHH-HHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 344445443 3344667777788877776653 3456778899998877666667778899999999988764
No 91
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=49.26 E-value=44 Score=26.52 Aligned_cols=40 Identities=20% Similarity=0.233 Sum_probs=33.5
Q ss_pred hhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccc
Q 041338 196 AMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLT 235 (269)
Q Consensus 196 al~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~ 235 (269)
....+...+..+.+-|++|++..++|..+.++|+.++...
T Consensus 65 GvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 65 GVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3456667778888899999999999999999999987643
No 92
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=48.76 E-value=1.4e+02 Score=27.93 Aligned_cols=50 Identities=18% Similarity=0.161 Sum_probs=39.8
Q ss_pred CHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhcccc
Q 041338 187 NVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTE 236 (269)
Q Consensus 187 svs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~ 236 (269)
.+..+.++.-.-=-.|.++|++++.+.+|.+-.-+..+++.|+.+-.+.+
T Consensus 285 GA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 285 GALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred chhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 44455555555556788999999999999999999999999999876654
No 93
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=47.85 E-value=2.5e+02 Score=26.54 Aligned_cols=122 Identities=11% Similarity=0.147 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHhh-cCCcHHHHHHHHHHHHHHHHHHH-HHhhccC-------CCCCCHHhH------------HHHHHHH
Q 041338 111 NIYFNIFNKQVLK-VFPYPTTVTAFQFGCGTVMIILM-WTLNLYA-------RPKLTRSQF------------AVILPLA 169 (269)
Q Consensus 111 si~~~i~nK~il~-~f~~P~tLt~~q~~v~~l~l~l~-~~l~~~~-------~~~ls~~~~------------~~ll~lg 169 (269)
.+-+..-.|++-+ +.+ |.....+|-.+|.+++.++ ......+ .++-..++| ..+...|
T Consensus 189 aiQ~v~Eek~l~~~nV~-pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~ 267 (372)
T KOG3912|consen 189 AIQMVCEEKQLKKSNVA-PLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIG 267 (372)
T ss_pred HHHHHHHHhhhhhccCC-HHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhh
Confidence 3444455566544 467 9999999999886654322 1111111 122122332 1222222
Q ss_pred HHHHHH--HHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhc
Q 041338 170 VAHTLG--NLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 170 ll~~~~--~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~ 233 (269)
..-.+. ++....-.++.|+.+-.++-.+-..++=+++..+.-|++..-+.+|.++.+.|+++-.
T Consensus 268 ~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 268 FTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred hhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222111 2222333456677777777888888888899999999999999999999999998753
No 94
>PF07207 Lir1: Light regulated protein Lir1; InterPro: IPR009856 This family consists of several plant specific light regulated Lir1 proteins. Lir1 mRNA accumulates in the light, reaching maximum and minimum steady-state levels at the end of the light and dark period, respectively. Plants germinated in the dark have very low levels of lir1 mRNA, whereas plants germinated in continuous light express lir1 at an intermediate but constant level. It is thought that lir1 expression is controlled by light and a circadian clock. The exact function of this family is unclear [].
Probab=43.81 E-value=41 Score=27.62 Aligned_cols=9 Identities=44% Similarity=0.892 Sum_probs=7.2
Q ss_pred CCCccccccC
Q 041338 1 MQGSSVALAP 10 (269)
Q Consensus 1 ~~~~~~~~~~ 10 (269)
|| +|.+++|
T Consensus 1 MQ-~als~a~ 9 (136)
T PF07207_consen 1 MQ-AALSFAP 9 (136)
T ss_pred Cc-cceeccc
Confidence 89 7777777
No 95
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=34.00 E-value=40 Score=31.47 Aligned_cols=133 Identities=17% Similarity=0.214 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHhhcC-CcHHHHHHHHHHHHHHHHHHHHHh-hc----cCCCCC-CHHhHHHHHHHHHH
Q 041338 100 LGGMFGLWYLLNIYFN-IFNKQVLKVF-PYPTTVTAFQFGCGTVMIILMWTL-NL----YARPKL-TRSQFAVILPLAVA 171 (269)
Q Consensus 100 ~~~l~~~W~~~si~~~-i~nK~il~~f-~~P~tLt~~q~~v~~l~l~l~~~l-~~----~~~~~l-s~~~~~~ll~lgll 171 (269)
.+.+.++|..+....+ ++.|..+-.. +.-+.++++--..+.++.++...+ +. ...++. +.+.|..+.+-|++
T Consensus 185 ~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglf 264 (347)
T KOG1442|consen 185 IGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLF 264 (347)
T ss_pred hhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHH
Confidence 4677788876665554 6777665432 224567777666665555444332 21 112333 23334444344444
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHhhh-hHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhc
Q 041338 172 HTLGNLLTNISLVTVNVSFTHTIKAM-EPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 172 ~~~~~~l~n~AL~~vsvs~~~iikal-~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~ 233 (269)
....++...+=+ ++..+.+|.|..+ --.-=.+++..+++|.-+..-|-+-+++++|-.+-.
T Consensus 265 gF~mgyvTg~QI-K~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT 326 (347)
T KOG1442|consen 265 GFAMGYVTGWQI-KVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYT 326 (347)
T ss_pred HHHhhheeeEEE-EecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHH
Confidence 222222222222 3444455555443 333345677888898888877777777777765543
No 96
>COG3296 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.88 E-value=1.1e+02 Score=25.31 Aligned_cols=28 Identities=32% Similarity=0.332 Sum_probs=14.4
Q ss_pred HHHHHHHHhhhhhccccccccHHHHHHH
Q 041338 220 SSLVPIVGGVALASLTEATFNWTGFCSA 247 (269)
Q Consensus 220 lgl~lii~GV~l~~~~~~s~~~~G~~~a 247 (269)
++.+++.+|+.++.......+.+|++..
T Consensus 75 vs~vLil~g~~la~t~~~~i~~ig~~l~ 102 (143)
T COG3296 75 VSFVLILAGVFLAATDISFIIIIGFFLT 102 (143)
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHH
Confidence 5566666676665433333344444443
No 97
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=28.27 E-value=2.4e+02 Score=25.29 Aligned_cols=63 Identities=16% Similarity=0.038 Sum_probs=38.8
Q ss_pred HHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhccccc
Q 041338 175 GNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALASLTEA 237 (269)
Q Consensus 175 ~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~~~~~ 237 (269)
-+++-|.+.....+-..++-.-+...--.....++.+-..+.-.+.+.++++.|-++....+.
T Consensus 217 FN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d 279 (290)
T KOG4314|consen 217 FNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPED 279 (290)
T ss_pred HhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccc
Confidence 345555555555444444433333333555666666666677778889999999888776543
No 98
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=27.92 E-value=6.2e+02 Score=25.28 Aligned_cols=76 Identities=16% Similarity=0.006 Sum_probs=44.4
Q ss_pred hcCHHHHHHHhhhhHHHHHHHHHHh--hCCCCCHHHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHH
Q 041338 185 TVNVSFTHTIKAMEPFFTVLFAALF--LGEKPTIWLASSLVPIVGGVALASLTEATFNWTGFCSAMASNVTNQSRNVF 260 (269)
Q Consensus 185 ~vsvs~~~iikal~Pvftvils~l~--lgEr~t~~~~lgl~lii~GV~l~~~~~~s~~~~G~~~alls~~~~al~~V~ 260 (269)
..++..+.++.+..-+-.++.+.+. ++++.+..+++.+..+..|+.+...+-....+...+..++..+++...++.
T Consensus 250 ~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~ 327 (524)
T PF05977_consen 250 GGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSS 327 (524)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578888888888877665555554 457777777766666666665544332222233334444455555554443
No 99
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=27.67 E-value=1.3e+02 Score=27.80 Aligned_cols=60 Identities=22% Similarity=0.260 Sum_probs=41.2
Q ss_pred HHHHHHHHHhhcCHHHHH-HHhhhhHHHHHHHHHHhhCCCC--CHH----HHHHHHHHHHhhhhhcc
Q 041338 175 GNLLTNISLVTVNVSFTH-TIKAMEPFFTVLFAALFLGEKP--TIW----LASSLVPIVGGVALASL 234 (269)
Q Consensus 175 ~~~l~n~AL~~vsvs~~~-iikal~Pvftvils~l~lgEr~--t~~----~~lgl~lii~GV~l~~~ 234 (269)
...+-|.|+++-+.+... +.......++++-+.++++|.- +.. ..+|++.++.||.+...
T Consensus 226 Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~ 292 (300)
T PF05653_consen 226 QLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSS 292 (300)
T ss_pred HHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeec
Confidence 456999999987665433 3444566678888889999654 442 34667778888887754
No 100
>PRK07668 hypothetical protein; Validated
Probab=26.51 E-value=5e+02 Score=23.70 Aligned_cols=27 Identities=15% Similarity=0.224 Sum_probs=12.3
Q ss_pred hccCCCCCCHHhHHHHHHHHHHHHHHH
Q 041338 150 NLYARPKLTRSQFAVILPLAVAHTLGN 176 (269)
Q Consensus 150 ~~~~~~~ls~~~~~~ll~lgll~~~~~ 176 (269)
+.++.+-.+..+|...+..|+......
T Consensus 164 k~yp~~~~~ls~~qs~il~~~~~i~~~ 190 (254)
T PRK07668 164 KWYGTPMLQFTQMQSYILAGLIFLITV 190 (254)
T ss_pred hhcCceEEEecchHHHHHHHHHHHHHH
Confidence 334444334445555555555444333
No 101
>TIGR00997 ispZ intracellular septation protein A. This partially characterized protein, whose absence can cause a cell division defect in an intracellularly replicating bacterium, is found only so far only in the Proteobacteria.
Probab=25.98 E-value=4.3e+02 Score=22.75 Aligned_cols=42 Identities=12% Similarity=0.169 Sum_probs=28.0
Q ss_pred CCCHHhHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhhh
Q 041338 156 KLTRSQFAVILPLAVAHTLGNLLTNISLVTVNVSFTHTIKAM 197 (269)
Q Consensus 156 ~ls~~~~~~ll~lgll~~~~~~l~n~AL~~vsvs~~~iikal 197 (269)
++++.++.....+.++.++..++.+--.-+.-++....+.+.
T Consensus 46 ~v~~m~~is~~lv~vFGglTl~~~d~~FIk~KpTIi~~lfa~ 87 (178)
T TIGR00997 46 KVEKMQWISFVLIVVFGGLTLIFHDSRFIKWKPTIIYGLFAV 87 (178)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHH
Confidence 455667777666666666677787777777776666555554
No 102
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=25.84 E-value=2.4e+02 Score=26.86 Aligned_cols=50 Identities=14% Similarity=0.143 Sum_probs=37.2
Q ss_pred hhcCHHHHHHHhhhhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhhhhc
Q 041338 184 VTVNVSFTHTIKAMEPFFTVLFAALFLGEKPTIWLASSLVPIVGGVALAS 233 (269)
Q Consensus 184 ~~vsvs~~~iikal~Pvftvils~l~lgEr~t~~~~lgl~lii~GV~l~~ 233 (269)
..+++-+-++..-..-+-+.+++..+.+++++...|+|+.+...|+.+-.
T Consensus 265 ~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 265 SRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred eeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 34444333333444456678999999999999999999999999998873
No 103
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=22.36 E-value=2.6e+02 Score=19.27 Aligned_cols=44 Identities=11% Similarity=0.193 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 041338 218 LASSLVPIVGGVALASLTEATFNWTGFCSAMASNVTNQSRNVFSKKFMV 266 (269)
Q Consensus 218 ~~lgl~lii~GV~l~~~~~~s~~~~G~~~alls~~~~al~~V~~Kkll~ 266 (269)
..+|.+++++|+++...... |.+..+++-...+.+-...+|.+.
T Consensus 5 ~v~G~~lv~~Gii~~~lPGp-----G~l~i~~GL~iLa~ef~wArr~l~ 48 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPLPGP-----GLLVIFLGLAILATEFPWARRLLR 48 (53)
T ss_pred hhHHHHHHHHHHHhhcCCCC-----cHHHHHHHHHHHHHhhHHHHHHHH
Confidence 45788888899888765432 445555555556655555565543
No 104
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=21.76 E-value=3e+02 Score=22.57 Aligned_cols=40 Identities=10% Similarity=0.206 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CcHHHHHHH
Q 041338 95 IQTLQLGGMFGLWYLLNIYFNIFNKQVLKVF-PYPTTVTAF 134 (269)
Q Consensus 95 ~~~~~~~~l~~~W~~~si~~~i~nK~il~~f-~~P~tLt~~ 134 (269)
++.+.+.++.++..+++.+-.++-|.++..+ +||++++-+
T Consensus 53 ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~Ql 93 (130)
T PF08627_consen 53 KENFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQL 93 (130)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHh
Confidence 4556667666666665555557778877765 467777655
No 105
>COG2510 Predicted membrane protein [Function unknown]
Probab=21.57 E-value=4.1e+02 Score=22.07 Aligned_cols=48 Identities=23% Similarity=0.348 Sum_probs=33.2
Q ss_pred HHHHHHHH-HHHHHHHHHHHHhhcCHHHHHHHhhhhHHHHHHHHHHhhC
Q 041338 164 VILPLAVA-HTLGNLLTNISLVTVNVSFTHTIKAMEPFFTVLFAALFLG 211 (269)
Q Consensus 164 ~ll~lgll-~~~~~~l~n~AL~~vsvs~~~iikal~Pvftvils~l~lg 211 (269)
....++.+ ..+..++.=++++.+++.++++++...-+..+..-.+..|
T Consensus 6 ~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g 54 (140)
T COG2510 6 IYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTG 54 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcC
Confidence 33444444 5567789999999999999999998766655444444444
No 106
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=21.37 E-value=8.3e+02 Score=24.40 Aligned_cols=85 Identities=11% Similarity=0.080 Sum_probs=45.8
Q ss_pred hcCHHHHHHHhhhhHHHHHHHHHHh--hCCCCCHHHHHHHHHHHHhhhh---h--cc-ccccc---cHHHHHHHHHHHHH
Q 041338 185 TVNVSFTHTIKAMEPFFTVLFAALF--LGEKPTIWLASSLVPIVGGVAL---A--SL-TEATF---NWTGFCSAMASNVT 253 (269)
Q Consensus 185 ~vsvs~~~iikal~Pvftvils~l~--lgEr~t~~~~lgl~lii~GV~l---~--~~-~~~s~---~~~G~~~alls~~~ 253 (269)
..|+....++.....+-.++++.+- +-+|+++++++-..-++.++.. . .. +..+. -...++..+.+++.
T Consensus 41 t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~ 120 (524)
T PF05977_consen 41 TGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFF 120 (524)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHH
Confidence 4566666666666555555555543 4688888877544443333221 1 11 22221 12344555666666
Q ss_pred HHHHHHHHHhhcccCC
Q 041338 254 NQSRNVFSKKFMVRKE 269 (269)
Q Consensus 254 ~al~~V~~Kkll~~~~ 269 (269)
.-.+......+.+++|
T Consensus 121 ~PA~~A~ip~lV~~~~ 136 (524)
T PF05977_consen 121 NPAWQAIIPELVPKED 136 (524)
T ss_pred HHHHHHHHHHhccHhh
Confidence 6667777766666553
No 107
>COG4292 Predicted membrane protein [Function unknown]
Probab=21.32 E-value=7.6e+02 Score=23.94 Aligned_cols=42 Identities=12% Similarity=0.093 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHH
Q 041338 101 GGMFGLWYLLNIYFNIFNKQVLKVFPYPTTVTAFQFGCGTVMI 143 (269)
Q Consensus 101 ~~l~~~W~~~si~~~i~nK~il~~f~~P~tLt~~q~~v~~l~l 143 (269)
.+...+||+-.-...+.|+.--+..+ +-.+...+|+++.++.
T Consensus 56 ll~lalWW~Wi~tT~ftnr~g~e~~~-~rl~l~~~Mf~~vlLa 97 (387)
T COG4292 56 LLILALWWAWIHTTWFTNRLGTEIEP-VRLLLLVLMFFGVLLA 97 (387)
T ss_pred HHHHHHHHHHHhhHHHHHhcCCchhh-HHHHHHHHHHHHHHHH
Confidence 44567788665555566665544455 6677777887776654
No 108
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=20.18 E-value=7e+02 Score=23.13 Aligned_cols=44 Identities=5% Similarity=0.056 Sum_probs=23.9
Q ss_pred cCHHHHHHHhhhhHHHHHHHHHHh--hCCCCCHHHHHHHHHHHHhh
Q 041338 186 VNVSFTHTIKAMEPFFTVLFAALF--LGEKPTIWLASSLVPIVGGV 229 (269)
Q Consensus 186 vsvs~~~iikal~Pvftvils~l~--lgEr~t~~~~lgl~lii~GV 229 (269)
.+.+....+.....+...+...+. +.+|..+++.+-...++.++
T Consensus 52 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~ 97 (394)
T PRK10213 52 ISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL 97 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHH
Confidence 455555555555555554444333 34788877765444444443
Done!