BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041340
(236 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O48916|FAH1_ARATH Fatty acid 2-hydroxylase 1 OS=Arabidopsis thaliana GN=FAH1 PE=1
SV=1
Length = 237
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 179/237 (75%), Positives = 200/237 (84%), Gaps = 2/237 (0%)
Query: 2 VVAQEFTVDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPV 61
+VAQ FTVDL KPLVFQVGHLGE Y+EWVHQPI +KEGPRFF+SDFWEFLTLTVWWA+PV
Sbjct: 1 MVAQGFTVDLKKPLVFQVGHLGEDYEEWVHQPIATKEGPRFFQSDFWEFLTLTVWWAVPV 60
Query: 62 IWLPVVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKE--GNTIHY 119
IWLPVV WCIS S+ MG +LP + +V+ GIF+WT EY LHRF+FHIKTK GNT HY
Sbjct: 61 IWLPVVVWCISRSVSMGCSLPEIVPIVVMGIFIWTFFEYVLHRFVFHIKTKSYWGNTAHY 120
Query: 120 LLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVT 179
L+HGCHHKHPMD LRLVFPP ATA+L PFW + +STP+T PALFGGG+LGYVMYDVT
Sbjct: 121 LIHGCHHKHPMDHLRLVFPPTATAILCFPFWNIAKAISTPSTAPALFGGGMLGYVMYDVT 180
Query: 180 HYYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTLPQTKAAEKSK 236
HYYLHH QP+ V KNLKKYHLNHHFRIQ+KGFGITSSLWD VFGTLP TKA K +
Sbjct: 181 HYYLHHAQPTRPVTKNLKKYHLNHHFRIQDKGFGITSSLWDIVFGTLPTTKAPRKEQ 237
>sp|Q9SUC5|FAH2_ARATH Fatty acid 2-hydroxylase 2 OS=Arabidopsis thaliana GN=FAH2 PE=1
SV=1
Length = 237
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/237 (73%), Positives = 196/237 (82%), Gaps = 2/237 (0%)
Query: 2 VVAQEFTVDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPV 61
+VA+ +TVDLNKPLVFQVGHLGE YQEW+HQPIV EGPRFFESDFWEFLT TVWWAIP
Sbjct: 1 MVAERYTVDLNKPLVFQVGHLGEEYQEWIHQPIVCVEGPRFFESDFWEFLTRTVWWAIPT 60
Query: 62 IWLPVVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKE--GNTIHY 119
IWLPVVC+ +S+S G T P + L+V FG+ WTLLEYTLHRFLFHI+TK NT HY
Sbjct: 61 IWLPVVCYVLSISASKGLTFPQIGLIVAFGVLTWTLLEYTLHRFLFHIQTKSYWANTAHY 120
Query: 120 LLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVT 179
LLHGCHHKHP DGLRLVFPP ATA+LL+P WK+L L++TP T PA+ GG L GYVMYD+T
Sbjct: 121 LLHGCHHKHPQDGLRLVFPPTATAILLVPLWKLLHLLATPATAPAILGGILFGYVMYDIT 180
Query: 180 HYYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTLPQTKAAEKSK 236
HYYLHHGQP K+LKKYHLNHHFRIQ+KG+GITSSLWD+VFGTLP KAA K
Sbjct: 181 HYYLHHGQPKEPTFKHLKKYHLNHHFRIQDKGYGITSSLWDKVFGTLPGIKAAAKKS 237
>sp|Q2LAM0|FA2H_RAT Fatty acid 2-hydroxylase OS=Rattus norvegicus GN=Fa2h PE=1 SV=2
Length = 372
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 144/251 (57%), Gaps = 25/251 (9%)
Query: 9 VDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPVIWLPVVC 68
VD KPL++QVGHLGE Y EWVHQP+ R F SD E + TVW+++P+IW+P+V
Sbjct: 124 VDWQKPLLWQVGHLGEKYDEWVHQPVARP--IRLFHSDLIEAFSKTVWYSVPIIWVPLVL 181
Query: 69 WC----------------ISMSIRMGQTLPHVALMVLF--GIFVWTLLEYTLHRFLFHIK 110
+ S + +P + LF G+ +WTL+EY +HRFLFH+K
Sbjct: 182 YLSWSYYRTLTQDNIRLFASFTRDYSLVVPESVFIGLFVLGMLIWTLVEYLIHRFLFHMK 241
Query: 111 TKEGN----TIHYLLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALF 166
+ +H+++HG HHK P DG RLVFPP +V++ F+ L L+ LF
Sbjct: 242 PPSNSHYLIMLHFVMHGQHHKAPFDGSRLVFPPVPASVVVAFFYVFLRLILPEAVAGILF 301
Query: 167 GGGLLGYVMYDVTHYYLHHGQP-SSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGT 225
GGLLGYV+YD+THYYLH G P N+K +H+ HHF Q GFGI++ LWD F T
Sbjct: 302 AGGLLGYVLYDMTHYYLHFGSPHKGSYLYNMKAHHVKHHFEYQKSGFGISTKLWDYFFHT 361
Query: 226 LPQTKAAEKSK 236
L +A K +
Sbjct: 362 LIPEEADPKMQ 372
>sp|Q5MPP0|FA2H_MOUSE Fatty acid 2-hydroxylase OS=Mus musculus GN=Fa2h PE=1 SV=1
Length = 372
Score = 193 bits (491), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 144/251 (57%), Gaps = 25/251 (9%)
Query: 9 VDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPVIWLPVVC 68
VD KPL++QVGHLGE Y EWVHQP+ R F SD E + TVW+++P+IW+P+V
Sbjct: 124 VDWQKPLLWQVGHLGEKYDEWVHQPVARPI--RLFHSDLIEAFSKTVWYSVPIIWVPLVL 181
Query: 69 WC----------------ISMSIRMGQTLPHVALMVLF--GIFVWTLLEYTLHRFLFHIK 110
+ S++ +P + LF G+ WT +EY +HRFLFH+K
Sbjct: 182 YLSWSYYRTLTQDNIRLFASLTREYSMMMPESVFIGLFVLGMLFWTFVEYVIHRFLFHMK 241
Query: 111 TKEGN----TIHYLLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALF 166
+ +H+++HG HHK P DG RLVFPP ++++ F+ L L+ T +F
Sbjct: 242 PPSNSHYLIMLHFVMHGQHHKAPFDGSRLVFPPVPASLVIAFFYVFLRLILPETVGGIIF 301
Query: 167 GGGLLGYVMYDVTHYYLHHGQP-SSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGT 225
GGLLGYV+YD+THYYLH G P N+K +H+ HHF Q GFGI++ LWD F T
Sbjct: 302 AGGLLGYVLYDMTHYYLHFGSPHKGSYLYNMKAHHVKHHFEYQKSGFGISTKLWDYFFHT 361
Query: 226 LPQTKAAEKSK 236
L +A K +
Sbjct: 362 LIPEEAHPKMQ 372
>sp|Q4R4P4|FA2H_MACFA Fatty acid 2-hydroxylase OS=Macaca fascicularis GN=FA2H PE=2 SV=1
Length = 372
Score = 192 bits (489), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/251 (42%), Positives = 145/251 (57%), Gaps = 25/251 (9%)
Query: 9 VDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPVIWLPVVC 68
VD KPL++QVGHLGE Y EWVHQP+ R F SD E L+ TVW+++P+IW+P+V
Sbjct: 124 VDWQKPLLWQVGHLGEKYDEWVHQPVTRP--IRLFHSDLIEGLSKTVWYSVPIIWVPLVL 181
Query: 69 WC----------------ISMSIRMGQTLPHVALMVLF--GIFVWTLLEYTLHRFLFHIK 110
+ S + +P LF GIF+W+L+EY +HRFLFH+K
Sbjct: 182 YLSWSYYRTFAQGNVRLFTSFTTEYALAVPKSMFPGLFMLGIFLWSLIEYLIHRFLFHMK 241
Query: 111 TKEGN----TIHYLLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALF 166
+ +H+++HG HHK P DG RLVFPP ++++ F+ L L+ +F
Sbjct: 242 PPSDSYYLIMLHFVMHGQHHKAPFDGSRLVFPPVPASLVIGVFYLCLQLILPEAVGGTVF 301
Query: 167 GGGLLGYVMYDVTHYYLHHGQP-SSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGT 225
GGLLGYV+YD+THYYLH G P NLK +H+ HHF Q GFGI++ LWD F T
Sbjct: 302 AGGLLGYVLYDMTHYYLHFGSPHRGSYLYNLKAHHVKHHFAHQKSGFGISTKLWDYCFHT 361
Query: 226 LPQTKAAEKSK 236
L K K++
Sbjct: 362 LIPEKPHLKTQ 372
>sp|Q7L5A8|FA2H_HUMAN Fatty acid 2-hydroxylase OS=Homo sapiens GN=FA2H PE=1 SV=1
Length = 372
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 144/251 (57%), Gaps = 25/251 (9%)
Query: 9 VDLNKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPVIWLPVV- 67
VD KPL++QVGHLGE Y EWVHQP+ R F SD E L+ TVW+++P+IW+P+V
Sbjct: 124 VDWRKPLLWQVGHLGEKYDEWVHQPVTRP--IRLFHSDLIEGLSKTVWYSVPIIWVPLVL 181
Query: 68 --CWCISMSIRMGQ-------------TLPHVALMVLF--GIFVWTLLEYTLHRFLFHIK 110
W + G +P LF G F+W+L+EY +HRFLFH+K
Sbjct: 182 YLSWSYYRTFAQGNVRLFTSFTTEYTVAVPKSMFPGLFMLGTFLWSLIEYLIHRFLFHMK 241
Query: 111 TKEGN----TIHYLLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALF 166
+ +H+++HG HHK P DG RLVFPP ++++ F+ + L+ +F
Sbjct: 242 PPSDSYYLIMLHFVMHGQHHKAPFDGSRLVFPPVPASLVIGVFYLCMQLILPEAVGGTVF 301
Query: 167 GGGLLGYVMYDVTHYYLHHGQP-SSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGT 225
GGLLGYV+YD+THYYLH G P +LK +H+ HHF Q GFGI++ LWD F T
Sbjct: 302 AGGLLGYVLYDMTHYYLHFGSPHKGSYLYSLKAHHVKHHFAHQKSGFGISTKLWDYCFHT 361
Query: 226 LPQTKAAEKSK 236
L K K++
Sbjct: 362 LTPEKPHLKTQ 372
>sp|Q03529|SCS7_YEAST Ceramide very long chain fatty acid hydroxylase SCS7
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS7 PE=1 SV=1
Length = 384
Score = 170 bits (431), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 131/228 (57%), Gaps = 16/228 (7%)
Query: 9 VDLNKPLVFQV---GHLGEAYQEWVHQPIVSKEGPRFFESDFWEFLTLTVWWAIPVIWLP 65
+DLN+PL+ Q+ + Y + +H+P +G +F E LT T WW +PV WLP
Sbjct: 148 LDLNRPLLMQILRSDFKKDFYVDQIHRPRHYGKGSAPLFGNFLEPLTKTAWWVVPVAWLP 207
Query: 66 VVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKT--KEGN---TIHYL 120
VV + + ++++ L + G+FVWTL+EY LHRFLFH E N H+L
Sbjct: 208 VVVYHMGVALKNMNQL-FACFLFCVGVFVWTLIEYGLHRFLFHFDDWLPESNIAFATHFL 266
Query: 121 LHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVTH 180
LHGCHH PMD RLV PP +L PF+K++ + A F GGL GYV YD H
Sbjct: 267 LHGCHHYLPMDKYRLVMPPTLFVILCAPFYKLVFALLPLYWAYAGFAGGLFGYVCYDECH 326
Query: 181 YYLHHGQPSSEVP---KNLKKYHLNHHFRIQNKGFGITSSLWDRVFGT 225
++LHH S++P + LKKYHL HH++ GFG+TS WD VFGT
Sbjct: 327 FFLHH----SKLPPFMRKLKKYHLEHHYKNYQLGFGVTSWFWDEVFGT 370
>sp|O13846|SCS7_SCHPO Ceramide very long chain fatty acid hydroxylase-like protein
C19G12.08 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC19G12.08 PE=3 SV=1
Length = 347
Score = 154 bits (390), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 136/249 (54%), Gaps = 29/249 (11%)
Query: 9 VDLNKPLVFQV--GHLG-EAYQEWVHQPI---VSKEGPRFFESDFWEFLTLTVWWAIPVI 62
+DL KPL+ Q+ G++ + Y + VH+P S P F +F E LT T W+ IP+I
Sbjct: 107 LDLKKPLLPQILFGNIKKDVYLDQVHRPRHYRGSGSAPLF--GNFLEPLTKTPWYMIPLI 164
Query: 63 WLPVVCW-----CISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKEGN-- 115
W+P V + C + + T + G+F WTL+EYT+HRFLFH+ +
Sbjct: 165 WVPCVTYGFLYACTGIPFSVAITF------FIIGLFTWTLVEYTMHRFLFHLDEYTPDHP 218
Query: 116 ---TIHYLLHGCHHKHPMDGLRLVFPPAATAVLLLPFWKVLSLVSTPTTTPALFGGGLLG 172
T+H+ HGCHH P D RLV PPA + P++ + LV A F G +LG
Sbjct: 219 IFLTMHFAFHGCHHFLPADKYRLVMPPALFLIFATPWYHFIQLVLPHYIGVAGFSGAILG 278
Query: 173 YVMYDVTHYYLHHGQPSSEVPKNLKKYHLNHHFRIQNKGFGITSSLWDRVFGTL-----P 227
YV YD+THY+LHH + + +LK +HL+HH++ +GITS WDRVFGT
Sbjct: 279 YVFYDLTHYFLHHRRMPNAYLTDLKTWHLDHHYKDYKSAYGITSWFWDRVFGTEGPLFNE 338
Query: 228 QTKAAEKSK 236
Q K + K+K
Sbjct: 339 QGKISTKAK 347
>sp|P42248|YCBP_BACSU Uncharacterized protein YcbP OS=Bacillus subtilis (strain 168)
GN=ycbP PE=4 SV=1
Length = 128
Score = 37.7 bits (86), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 66 VVCWCISMSIRMGQTLPHVALMVLFGIFVWTLLEYTLHRFLFHIKTKEGNTIHYL 120
+V W + M + MG T VAL LFG V + EY H F++ +KE HYL
Sbjct: 71 LVIWLMGMPLSMGMTGGEVALAALFGAIVMAIGEYCFH---FYMMSKEIGKKHYL 122
>sp|Q1LX59|C2512_DANRE Cholesterol 25-hydroxylase-like protein 1, member 2 OS=Danio rerio
GN=ch25hl1.2 PE=3 SV=1
Length = 276
Score = 31.6 bits (70), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 59/152 (38%), Gaps = 19/152 (12%)
Query: 85 ALMVLFGIFVWTLLEYTLHRFLFHIKTKEGNTIHYLLHGCHHKHPMDGLRLVFPPAATAV 144
L+ L G LL + L F++H + ++ H HH + P A A
Sbjct: 122 TLLELVGGVTGNLLLFDLQYFIWHFLHHKIRWLYVTFHAIHHNYSA--------PFALAT 173
Query: 145 LLLPFWKVLSLVSTPTTTPALFGGGLLGYVMYDVTHYYL----HHG-----QPSSEVPKN 195
L W+++++ T P L LL M+ V H Y+ H G S +P
Sbjct: 174 QCLGGWELVTVGFWTTLNPVLLRCHLLTTWMFMVVHVYVSVEDHCGYDFPWSTSRLIPFG 233
Query: 196 LKKYHLNH--HFRIQNKGFGITSSLWDRVFGT 225
+ H H + N F S WD++FGT
Sbjct: 234 VYGGPSKHDVHHQKPNTNFAPHFSHWDKMFGT 265
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.141 0.477
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,180,902
Number of Sequences: 539616
Number of extensions: 3971618
Number of successful extensions: 10499
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 10457
Number of HSP's gapped (non-prelim): 24
length of query: 236
length of database: 191,569,459
effective HSP length: 114
effective length of query: 122
effective length of database: 130,053,235
effective search space: 15866494670
effective search space used: 15866494670
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)