BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041343
(197 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ SP LY
Sbjct: 288 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGE 347
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 348 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 404
Query: 192 GQKI 195
GQ+
Sbjct: 405 GQQF 408
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 50/124 (40%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K+ EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKVAEEATRVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 291 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 350
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 351 YPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 407
Query: 192 GQKI 195
GQ+
Sbjct: 408 GQQF 411
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 286 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 345
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 402
Query: 192 GQKI 195
GQ+
Sbjct: 403 GQQF 406
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HELQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 288 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 347
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 348 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 404
Query: 192 GQKI 195
GQ+
Sbjct: 405 GQQF 408
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 286 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 345
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 402
Query: 192 GQKI 195
GQ+
Sbjct: 403 GQQF 406
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 286 HELQKAAEEAARVLVDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 345
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 402
Query: 192 GQKI 195
GQ+
Sbjct: 403 GQQF 406
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 286 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 345
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 402
Query: 192 GQKI 195
GQ+
Sbjct: 403 GQQF 406
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 48/124 (38%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLYS--PVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ P LY
Sbjct: 288 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGE 347
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 348 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 404
Query: 192 GQKI 195
GQ+
Sbjct: 405 GQQF 408
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 286 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGE 345
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 402
Query: 192 GQKI 195
GQ+
Sbjct: 403 GQQF 406
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 48/124 (38%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLYS--PVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 48/124 (38%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLYS--PVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ P LY
Sbjct: 286 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGE 345
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 402
Query: 192 GQKI 195
GQ+
Sbjct: 403 GQQF 406
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALR++ +P LY
Sbjct: 286 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGE 345
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 402
Query: 192 GQKI 195
GQ+
Sbjct: 403 GQQF 406
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A +G G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPYGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACI 401
Query: 192 GQKI 195
G++
Sbjct: 402 GKQF 405
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A +G G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPWGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 48/124 (38%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 286 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 345
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RAC
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACP 402
Query: 192 GQKI 195
GQ+
Sbjct: 403 GQQF 406
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 48/124 (38%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A FG G RAC
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPFGNGQRACE 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 48/124 (38%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A G G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPHGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 48/124 (38%), Gaps = 34/124 (27%)
Query: 103 HWQAKLREEVLEYCGIGIPDADILSNLKLVNMVLLEALRLY--SPVIRLY---------- 150
H K EE +P + LK V MVL EALRL+ +P LY
Sbjct: 285 HVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGE 344
Query: 151 ---RQGSQ----------------EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACI 191
+G + +D EEF P RF N +A +A G G RACI
Sbjct: 345 YPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN---PSAIPQHAFKPAGNGQRACI 401
Query: 192 GQKI 195
GQ+
Sbjct: 402 GQQF 405
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 31/120 (25%)
Query: 105 QAKLREEVLEYC-GIGIPDADILSNLKLVNMVLLEALRLYSPVIRLYRQGSQE------- 156
Q KL+EE+ P D + ++ ++MV+ E LRL+ +RL R ++
Sbjct: 306 QQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMF 365
Query: 157 ----------------------DAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACIGQK 194
+ E+F P RF + K +P FG+GPR CIG +
Sbjct: 366 IPKGVVVMIPSYALHRDPKYWTEPEKFLPERF-SKKNKDNIDPYIYTPFGSGPRNCIGMR 424
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 31/120 (25%)
Query: 105 QAKLREEVLEYC-GIGIPDADILSNLKLVNMVLLEALRLYSPVIRLYRQGSQE------- 156
Q KL+EE+ P D + ++ ++MV+ E LRL+ +RL R ++
Sbjct: 308 QQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMF 367
Query: 157 ----------------------DAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACIGQK 194
+ E+F P RF + K +P FG+GPR CIG +
Sbjct: 368 IPKGVVVMIPSYALHRDPKYWTEPEKFLPERF-SKKNKDNIDPYIYTPFGSGPRNCIGMR 426
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 31/120 (25%)
Query: 105 QAKLREEVLEYC-GIGIPDADILSNLKLVNMVLLEALRLYSPVIRLYRQGSQE------- 156
Q KL+EE+ P D + ++ ++MV+ E LRL+ +RL R ++
Sbjct: 307 QQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMF 366
Query: 157 ----------------------DAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACIGQK 194
+ E+F P RF + K +P FG+GPR CIG +
Sbjct: 367 IPKGVVVMIPSYALHRDPKYWTEPEKFLPERF-SKKNKDNIDPYIYTPFGSGPRNCIGMR 425
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 159 EEFSPLRFINGVTKAARNPN-AMLAFGAGPRACIGQ 193
++F P RF+N +P+ + L FGAGPR+CIG+
Sbjct: 392 DQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGE 427
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 156 EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACIGQKI 195
ED+ +F P R++ K NP A L FG G R CIG+++
Sbjct: 398 EDSHKFRPERWLQKEKKI--NPFAHLPFGIGKRMCIGRRL 435
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 49/156 (31%)
Query: 83 SISDIFIPGSQHLYNGLA-----LLHW---QAKLREEVLEYCGIGIPDADIL----SNLK 130
S+ D+FI G++ + L+ LLH Q +L+EE+ G G + + + L
Sbjct: 283 SVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLP 342
Query: 131 LVNMVLLEALRLYSPVIRL---YR----------------------QGSQ------EDAE 159
L+N + E LRL PV+ L +R QG+ E
Sbjct: 343 LLNATIAEVLRL-RPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPH 401
Query: 160 EFSPLRFINGVTKAARNPNAMLAFGAGPRACIGQKI 195
EF P RF+ + NP+A LAFG G R C+G+ +
Sbjct: 402 EFRPDRFL----EPGANPSA-LAFGCGARVCLGESL 432
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 156 EDAEEFSPLRFINGVTKAARNP--NAMLAFGAGPRACIGQ 193
ED EF P RF+ A P M+ FG G R CIG+
Sbjct: 398 EDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGE 437
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 29/102 (28%)
Query: 123 ADILSNLKLVNMVLLEALRLYSPVIRLYRQGSQE-------------------------- 156
A+ L + ++ VL E LRL PV +R+ Q+
Sbjct: 295 AETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPD 354
Query: 157 ---DAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACIGQKI 195
D E+F P RF + P A + FG G R C+G++
Sbjct: 355 LYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEF 396
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 32/124 (25%)
Query: 105 QAKLREEVLEYCGIGIP--DADILSNLKLVNMVLLEALRLYSPVIRLYR----------- 151
Q K E CG +P D L +L L++ + E LRL P++ + R
Sbjct: 286 QKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGY 345
Query: 152 ------------------QGSQEDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACIGQ 193
+ S + +F+P R++ A+ A + FGAG CIG+
Sbjct: 346 TIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQD-NPASGEKFAYVPFGAGRHRCIGE 404
Query: 194 KIEF 197
+
Sbjct: 405 NFAY 408
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 30.4 bits (67), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 54/147 (36%), Gaps = 41/147 (27%)
Query: 87 IFIPGSQHLYNGLALLHWQ--------AKLREEVLEYCGIG-IPDADILSNLKLVNMVLL 137
FI G + N LA + A+L+ EV E G D + L L+ ++ VL
Sbjct: 251 FFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLK 310
Query: 138 EALRLYSPVIRLYRQGSQ-----------------------------EDAEEFSPLRFIN 168
E+LRLY P +R + ED F+P RF
Sbjct: 311 ESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGP 370
Query: 169 GVTKAARNPNAMLAFGAGPRACIGQKI 195
G A + F G R+CIGQ+
Sbjct: 371 G---APKPRFTYFPFSLGHRSCIGQQF 394
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 175 RNPNAMLAFGAGPRACIGQKI 195
RNPN+ LAFG G C+G ++
Sbjct: 325 RNPNSHLAFGFGTHFCLGNQL 345
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 10/36 (27%)
Query: 157 DAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACIG 192
D E+F P RNPN L+FG+G C+G
Sbjct: 294 DGEKFIP----------DRNPNPHLSFGSGIHLCLG 319
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 10/36 (27%)
Query: 157 DAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACIG 192
D E+F P RNPN L+FG+G C+G
Sbjct: 294 DGEKFIP----------DRNPNPHLSFGSGIHLCLG 319
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 19/90 (21%)
Query: 125 ILSNLKLVNMVLLEALRLYSPVIRLYR--------QGSQEDAEE-----FSPLRFINGVT 171
+++++ L+ + E LR SPV + R G++ A E F F V
Sbjct: 259 LVADVDLLPGAIEEMLRWTSPVKNMCRTLTADTVFHGTELRAGEKIMLMFESANFDESVF 318
Query: 172 ------KAARNPNAMLAFGAGPRACIGQKI 195
+ RNPN+ +AFG G C+G ++
Sbjct: 319 GDPDNFRIDRNPNSHVAFGFGTHFCLGNQL 348
>pdb|1YGG|A Chain A, Crystal Structure Of Phosphoenolpyruvate Carboxykinase
From Actinobacillus Succinogenes
pdb|1YLH|A Chain A, Crystal Structure Of Phosphoenolpyruvate Carboxykinase
From Actinobaccilus Succinogenes In Complex With
Manganese And Pyruvate
Length = 560
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Query: 126 LSNLKLVNMVLLEALRLYSPVIRLYRQGSQEDAE-----EFSPLRFINGVTKAARNPNAM 180
+ L + N+ + +AL P I R + A+ E RF+ K NP A
Sbjct: 492 MGELPIFNLAIPKALPGVDPAILDPRDTYADKAQWQVKAEDLANRFVKNFVKYTANPEAA 551
Query: 181 LAFGAGPRA 189
GAGP+A
Sbjct: 552 KLVGAGPKA 560
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 156 EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACIGQKI 195
E F P F++ + P A L F AG RAC+G+ +
Sbjct: 388 EKPFRFHPEHFLDAQGHFVK-PEAFLPFSAGRRACLGEPL 426
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 156 EDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACIGQKI 195
E F P F++ + P A L F AG RAC+G+ +
Sbjct: 388 EKPFRFHPEHFLDAQGHFVK-PEAFLPFSAGRRACLGEPL 426
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 144 SPVIRLYRQGSQEDAEEFSPLRFINGVTKAARNPNAMLAFGAGPRACIGQKI 195
+PV+ +++ AE P F+ G R PN + FG G C+G +
Sbjct: 323 TPVVAWLPAANRDPAEFDDPDTFLPG-----RKPNRHITFGHGMHHCLGSAL 369
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 27.3 bits (59), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 35/98 (35%), Gaps = 29/98 (29%)
Query: 124 DILSNLKLVNMVLLEALRLYSPVIRLYRQGSQE-----------------------DAEE 160
D+L++ LV + E LR PV + RQ SQ+ D E
Sbjct: 294 DVLADRSLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEA 353
Query: 161 FSPLRFIN------GVTKAARNPNAMLAFGAGPRACIG 192
F N G+ A LAFG+G C+G
Sbjct: 354 FEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVG 391
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 26.9 bits (58), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 31/87 (35%), Gaps = 19/87 (21%)
Query: 128 NLKLVNMVLLEALRLYSPVIRLYRQGSQE------------------DAEEFSPLRFIN- 168
N L+ + E LR SP R S++ A P F N
Sbjct: 263 NPDLIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNP 322
Query: 169 GVTKAARNPNAMLAFGAGPRACIGQKI 195
V R+PN L+FG G C+G +
Sbjct: 323 DVFDITRSPNPHLSFGHGHHVCLGSSL 349
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,360,400
Number of Sequences: 62578
Number of extensions: 192885
Number of successful extensions: 692
Number of sequences better than 100.0: 62
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 594
Number of HSP's gapped (non-prelim): 107
length of query: 197
length of database: 14,973,337
effective HSP length: 94
effective length of query: 103
effective length of database: 9,091,005
effective search space: 936373515
effective search space used: 936373515
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 49 (23.5 bits)