Query 041347
Match_columns 189
No_of_seqs 133 out of 344
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 10:14:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041347.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041347hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2y3q_A Bacterioferritin; metal 96.4 0.045 1.5E-06 40.9 10.5 105 33-140 8-141 (158)
2 3uno_A Probable bacterioferrit 96.3 0.042 1.4E-06 44.6 11.0 105 31-138 10-144 (189)
3 2fkz_A Bacterioferritin; ferro 96.3 0.052 1.8E-06 40.2 10.7 106 33-141 8-142 (155)
4 2qqy_A Sigma B operon; dodecam 96.3 0.059 2E-06 39.6 10.6 97 33-132 12-136 (149)
5 4am5_A Bacterioferritin; metal 96.2 0.057 2E-06 41.5 10.6 99 32-133 7-134 (159)
6 1eum_A Ferritin 1; ECFTNA, met 96.2 0.045 1.5E-06 42.6 9.9 107 32-141 6-142 (165)
7 3pvt_A Phenylacetic acid degra 95.9 0.01 3.4E-07 52.5 5.4 103 31-142 32-173 (311)
8 1jgc_A Bacterioferritin, BFR; 95.8 0.094 3.2E-06 39.2 10.0 106 33-141 8-142 (161)
9 1s3q_A Ferritin; ferroxidase, 95.8 0.059 2E-06 42.7 9.2 108 31-141 7-144 (173)
10 1rcd_A L ferritin; iron storag 95.8 0.18 6.2E-06 39.7 12.0 110 30-141 11-153 (173)
11 1krq_A Ferritin; H-chain like 95.8 0.056 1.9E-06 42.2 8.9 112 32-147 6-147 (167)
12 3qb9_A Bacterioferritin, BFR; 95.8 0.11 3.8E-06 39.8 10.5 106 33-141 10-144 (174)
13 2cih_A Ferritin heavy chain; a 95.7 0.23 7.9E-06 39.7 12.3 113 28-142 13-158 (183)
14 1nfv_A Bacterioferritin; 24 su 95.5 0.12 4E-06 40.0 9.9 102 33-137 13-143 (179)
15 3qz3_A Ferritin; structural ge 95.4 0.16 5.5E-06 40.8 10.7 111 30-143 13-153 (184)
16 3oj5_A Ferritin family protein 95.2 0.26 8.8E-06 39.0 11.2 102 32-136 11-142 (189)
17 3r2k_A Bacterioferritin, BFR; 95.2 0.16 5.3E-06 38.1 9.4 96 33-131 8-132 (154)
18 2v2p_A Ferritin light chain; m 94.9 0.69 2.4E-05 36.4 12.8 111 30-141 10-152 (174)
19 3ka8_A Ferritin, middle subuni 94.9 0.69 2.4E-05 36.7 12.8 112 31-143 12-155 (176)
20 1j30_A 144AA long hypothetical 94.9 0.22 7.4E-06 37.8 9.5 98 32-132 9-132 (144)
21 3a68_A Sferh-4, ferritin-4, ch 94.7 1.3 4.6E-05 36.3 14.5 112 28-141 41-189 (212)
22 3bvf_A Ferritin; iron storage, 94.6 0.31 1.1E-05 38.6 10.0 100 30-132 18-147 (181)
23 3gvy_A Bacterioferritin; iron 94.6 0.28 9.7E-06 36.9 9.4 105 33-140 8-141 (161)
24 3uoi_A Bacterioferritin, BFR; 94.5 0.5 1.7E-05 35.5 10.7 105 33-140 10-143 (161)
25 2inc_A Toluene, O-xylene monoo 94.5 0.54 1.8E-05 43.7 12.8 102 37-144 97-248 (491)
26 2jd6_0 Ferritin homolog, ferri 94.4 0.5 1.7E-05 36.4 10.5 105 33-140 7-141 (174)
27 2vzb_A Putative bacterioferrit 93.9 1.2 4.2E-05 33.4 11.6 105 33-140 19-160 (170)
28 3fvb_A Bacterioferritin; niaid 93.8 0.47 1.6E-05 37.2 9.5 104 32-138 28-160 (182)
29 1otk_A Protein PAAC, phenylace 93.4 0.15 5.2E-06 43.7 6.5 71 71-142 39-147 (249)
30 3e6s_A Ferritin; iron storage, 93.1 0.98 3.4E-05 35.6 10.3 114 31-148 4-149 (168)
31 1vlg_A Ferritin; TM1128, struc 92.4 0.88 3E-05 35.5 9.0 99 30-131 18-146 (176)
32 3kxu_A Ferritin; iron storage 92.1 3.2 0.00011 33.6 12.4 111 31-142 12-154 (191)
33 2fzf_A Hypothetical protein; s 91.9 3.3 0.00011 31.8 11.8 104 35-144 24-165 (175)
34 3vnx_A Ferritin; 4-helix bundl 91.6 2.8 9.5E-05 34.2 11.6 114 28-142 36-185 (204)
35 3pwf_A Rubrerythrin; non heme 91.5 0.22 7.6E-06 40.0 4.8 97 41-144 16-127 (170)
36 1o9i_A Pseudocatalase; oxidore 89.7 5.3 0.00018 34.5 12.1 60 34-97 24-85 (266)
37 2vxx_A Starvation induced DNA 89.1 3.2 0.00011 32.7 9.6 96 32-131 29-163 (192)
38 1mty_D Methane monooxygenase h 88.8 5.2 0.00018 37.4 12.2 103 35-143 92-246 (512)
39 2v8t_A Manganese-containing ps 87.3 7 0.00024 34.4 11.5 58 35-96 26-88 (302)
40 1z6o_M Ferritin heavy chain; m 86.9 5.6 0.00019 31.8 9.8 65 27-92 16-81 (191)
41 2itb_A TRNA-(MS(2)IO(6)A)-hydr 82.6 7.3 0.00025 32.7 8.9 66 28-99 24-89 (206)
42 1ji5_A DLP-1; dodecamer, four- 82.2 3.7 0.00013 30.1 6.3 26 67-92 35-60 (142)
43 3u52_A Phenol hydroxylase comp 81.8 25 0.00084 32.8 13.1 104 34-143 99-250 (511)
44 3k6c_A Uncharacterized protein 81.6 4.6 0.00016 30.2 6.6 51 35-91 23-73 (95)
45 3k6c_A Uncharacterized protein 79.8 2.2 7.7E-05 31.9 4.4 47 93-140 28-74 (95)
46 2uw1_A Desaturase, plastid del 79.7 6.2 0.00021 35.3 7.9 74 69-143 108-221 (338)
47 1zpy_A Hypothetical protein NE 79.6 2.3 7.9E-05 31.8 4.4 44 96-140 31-74 (95)
48 3ge3_A Toluene-4-monooxygenase 79.5 13 0.00044 34.8 10.3 105 33-143 94-248 (500)
49 3hl1_A Ferritin like protein; 79.4 11 0.00037 33.5 9.3 63 27-92 6-68 (317)
50 3pf7_A Benzoyl-COA oxygenase c 79.0 31 0.0011 32.3 12.6 110 27-143 101-257 (481)
51 1yuz_A Nigerythrin; rubrythrin 77.6 27 0.00092 28.3 12.1 105 32-143 29-162 (202)
52 2hz8_A De novo designed DIIRON 77.2 9.5 0.00032 29.4 7.3 74 35-132 36-110 (115)
53 1jig_A DLP-2; dodecamer, four- 75.7 6.9 0.00023 28.9 6.1 25 68-92 40-64 (146)
54 1z6o_A Ferritin light chain; m 74.0 32 0.0011 28.0 10.2 76 16-92 19-97 (212)
55 1n1q_A DPS protein; four-helix 74.0 8 0.00027 28.7 6.1 25 68-92 43-67 (149)
56 2c41_A DPS family DNA-binding 73.5 26 0.0009 26.3 10.4 95 32-130 11-143 (158)
57 2oh3_A Rubrerythrin, COG1633: 73.5 27 0.00094 26.4 9.2 95 39-137 13-146 (167)
58 3mjo_A Ribonucleotide reductas 71.2 11 0.00038 32.2 7.1 110 28-143 58-218 (296)
59 1zpy_A Hypothetical protein NE 71.0 23 0.00079 26.3 7.9 52 35-92 23-74 (95)
60 1za0_A Possible acyl-[acyl-car 70.9 13 0.00045 32.1 7.5 69 75-144 104-207 (275)
61 1vjx_A Putative ferritin-like 70.5 18 0.00063 27.3 7.5 56 32-92 101-156 (157)
62 1o9r_A Agrobacterium tumefacie 70.0 7.5 0.00026 29.9 5.2 58 71-130 55-151 (162)
63 2fjc_A Antigen TPF1; mini ferr 67.3 9.3 0.00032 29.2 5.2 22 71-92 51-72 (156)
64 2chp_A MRGA, metalloregulation 66.9 9.6 0.00033 29.0 5.2 58 71-130 50-145 (153)
65 4di0_A Rubrerythrin; ssgcid, s 66.7 6.9 0.00024 30.2 4.4 93 36-131 17-133 (144)
66 2d5k_A DPS, DPS family protein 65.9 7.9 0.00027 29.3 4.5 24 69-92 43-66 (156)
67 1lko_A Rubrerythrin all-iron(I 64.9 28 0.00094 27.8 7.8 104 34-140 11-142 (191)
68 1tjo_A Iron-rich DPSA-homolog 64.2 11 0.00038 29.5 5.2 61 68-130 63-163 (182)
69 2fzf_A Hypothetical protein; s 62.7 48 0.0016 25.1 9.3 62 29-95 103-164 (175)
70 3n37_A Ribonucleoside-diphosph 61.9 30 0.001 29.8 8.0 112 26-143 47-209 (319)
71 3kwo_A Putative bacterioferrit 61.1 14 0.00049 28.0 5.2 59 70-130 42-139 (152)
72 4eve_A Neutrophil-activating p 57.4 17 0.0006 28.2 5.2 60 70-130 59-156 (164)
73 1za0_A Possible acyl-[acyl-car 57.1 21 0.00072 30.8 6.1 22 71-92 182-203 (275)
74 3iq1_A DPS family protein; csg 56.2 14 0.0005 28.2 4.5 24 69-92 54-77 (159)
75 2c2u_A DPS, DNA-binding stress 55.3 15 0.00051 30.0 4.7 58 71-130 98-194 (207)
76 2oc5_A Hypothetical protein; D 52.9 1.1E+02 0.0037 26.1 9.9 71 65-140 61-172 (244)
77 1vjx_A Putative ferritin-like 52.8 34 0.0012 25.7 6.1 89 41-136 24-152 (157)
78 2cf7_A DPR; peroxide resistanc 52.4 18 0.00061 28.0 4.5 58 71-130 55-152 (165)
79 2oh3_A Rubrerythrin, COG1633: 51.8 66 0.0023 24.2 7.7 57 31-92 93-149 (167)
80 1syy_A Ribonucleoside-diphosph 51.8 14 0.00047 32.1 4.2 30 113-143 215-244 (346)
81 3dhz_A Ribonucleotide reductas 50.9 1.2E+02 0.0041 26.1 12.5 111 27-143 58-219 (329)
82 2bk6_A Non-heme iron-containin 46.8 25 0.00087 26.6 4.5 58 71-130 46-143 (156)
83 2yjk_A AFP, DPS; metal-binding 45.8 35 0.0012 26.1 5.2 22 71-92 58-79 (161)
84 2c2j_A DNA-binding stress resp 44.7 31 0.0011 28.2 5.1 22 71-92 85-106 (211)
85 3fse_A Two-domain protein cont 43.9 48 0.0016 29.3 6.4 87 49-144 224-317 (365)
86 2wlu_A DPS-like peroxide resis 43.9 29 0.00098 27.1 4.5 58 71-130 65-162 (175)
87 3ez0_A Uncharacterized protein 43.7 1.3E+02 0.0043 25.5 8.7 65 30-102 14-79 (225)
88 2pyb_A NAPA, neutrophil activa 42.1 22 0.00076 26.8 3.5 58 72-130 44-140 (151)
89 1mty_B Methane monooxygenase h 41.8 1.4E+02 0.0048 26.7 9.2 103 35-143 143-300 (384)
90 2xgw_A Peroxide resistance pro 41.1 32 0.0011 27.8 4.5 58 71-130 81-178 (199)
91 3ge3_B Toluene-4-monooxygenase 38.6 2E+02 0.0067 25.0 11.2 40 103-143 236-275 (327)
92 2clb_A DPS-like protein; DI-ir 38.2 85 0.0029 24.5 6.5 57 33-92 27-84 (188)
93 2inc_B Toluene, O-xylene monoo 34.3 2.3E+02 0.0077 24.5 12.0 99 39-143 121-271 (322)
94 3ee4_A Probable ribonucleoside 34.2 42 0.0014 29.0 4.4 30 113-143 199-228 (323)
95 2e0z_A Virus-like particle; ba 33.9 8.6 0.00029 34.1 0.0 66 41-111 29-102 (345)
96 2rcc_A Ribonucleoside-diphosph 32.4 43 0.0015 28.9 4.2 30 113-143 208-237 (346)
97 1mhy_B Methane monooxygenase h 32.3 2.4E+02 0.0084 25.2 9.2 105 33-143 149-308 (395)
98 2uw1_A Desaturase, plastid del 32.2 33 0.0011 30.6 3.5 20 73-92 199-218 (338)
99 4a58_A Ribonucleoside-diphosph 30.8 74 0.0025 27.4 5.4 108 27-143 64-227 (324)
100 1dp7_P MHC class II transcript 29.5 62 0.0021 22.8 3.9 26 139-188 28-53 (76)
101 3qhb_A Symerythrin, ORF180; fo 29.0 79 0.0027 25.5 4.9 94 33-131 26-166 (179)
102 2p1i_A Ribonucleotide reductas 28.6 40 0.0014 29.4 3.4 28 113-141 214-241 (349)
103 3ak8_A DNA protection during s 27.2 1.6E+02 0.0054 22.5 6.3 55 71-126 66-125 (167)
104 2p1h_A APAF-1, apoptotic prote 24.5 1.7E+02 0.0059 19.9 5.7 58 79-144 5-77 (94)
105 2z90_A Starvation-inducible DN 23.5 1.9E+02 0.0067 21.8 6.1 72 71-144 56-132 (161)
106 1d8w_A L-rhamnose isomerase; b 22.6 1.4E+02 0.0047 27.6 5.8 51 92-148 356-406 (426)
107 2yw6_A DNA protection during s 22.1 2.1E+02 0.0071 22.3 6.2 22 71-92 54-75 (183)
108 1mxr_A Ribonucleotide reductas 21.7 89 0.003 27.3 4.3 37 106-143 218-255 (375)
109 3p14_A L-rhamnose isomerase; T 21.6 1.7E+02 0.0057 26.9 6.2 50 93-148 355-404 (424)
110 2bn5_A PSI; nuclear protein, s 21.5 69 0.0023 19.7 2.5 26 95-120 1-26 (33)
111 1wty_A Hypothetical protein TT 21.2 33 0.0011 25.0 1.2 44 29-76 21-64 (119)
112 2o1z_A Ribonucleotide reductas 20.2 57 0.0019 28.0 2.7 28 113-141 213-240 (311)
No 1
>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*
Probab=96.35 E-value=0.045 Score=40.90 Aligned_cols=105 Identities=16% Similarity=0.079 Sum_probs=72.6
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHH------------ccCCC--
Q 041347 33 QAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELA------------RGLNV-- 98 (189)
Q Consensus 33 aalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elA------------RGLDv-- 98 (189)
+..|-..-..|+.|+....-..+.|.. .++| .+..=|-+.+.+|..|...+.+|+..++ .|-|+
T Consensus 8 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~-~~~~-~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~~~~~e 85 (158)
T 2y3q_A 8 INYLNKLLGNELVAINQYFLHARMFKN-WGLK-RLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEE 85 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCCSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh-cCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCCCCCHHH
Confidence 445556667999999988777777741 2344 5666667899999999999999999881 01011
Q ss_pred ---------------cHHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHH
Q 041347 99 ---------------LPTAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYL 140 (189)
Q Consensus 99 ---------------~P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~l 140 (189)
-..+++.....||..+.++|+. |..||..|+..=..++..+
T Consensus 86 ~l~~~l~~E~~~~~~y~~~~~~a~~~~D~~t~~~l~~-~~~ee~~h~~~l~~~l~~l 141 (158)
T 2y3q_A 86 MLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIE-ILRDEEGHIDWLETELDLI 141 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 0122223334599999999995 8999999986555555444
No 2
>3uno_A Probable bacterioferritin BFRB; ferroxidase activity, iron storage, oxidoreductase; 2.50A {Mycobacterium tuberculosis} PDB: 3oj5_A 3qd8_A
Probab=96.35 E-value=0.042 Score=44.61 Aligned_cols=105 Identities=18% Similarity=0.223 Sum_probs=75.0
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHH------------ccCCC
Q 041347 31 NRQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELA------------RGLNV 98 (189)
Q Consensus 31 ~RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elA------------RGLDv 98 (189)
.-+..|-...+.|+.|+...+-...=|. ..++| .|-.=|.+.|.||-.|...|.+++..++ -+..-
T Consensus 10 ~v~~~LN~qi~~El~As~~Yl~~a~~f~-~~~l~-g~a~~f~~~A~EE~~HA~~l~~~i~~rGG~~~l~~i~~p~~~~~s 87 (189)
T 3uno_A 10 KFHALMQEQIHNEFTAAQQYVAIAVYFD-SEDLP-QLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQFDR 87 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCChH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCCCccchH
Confidence 4567888999999999999886665564 23544 5666666889999999999999999871 01111
Q ss_pred cH------------------HHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHH
Q 041347 99 LP------------------TAISRFRNGGDNETAELLERVVYREEITHCAARVRWFR 138 (189)
Q Consensus 99 ~P------------------~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~ 138 (189)
.. .+++.-...+|..+.+.|+ -|+.||+.|+..=...+.
T Consensus 88 ~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe-~fL~EQve~~~~l~~~l~ 144 (189)
T 3uno_A 88 PREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQ-WFLQEQIEEVALMATLVR 144 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 11 1222334579999999999 489999999876444443
No 3
>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*
Probab=96.33 E-value=0.052 Score=40.18 Aligned_cols=106 Identities=19% Similarity=0.139 Sum_probs=70.5
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHH------------ccCC---
Q 041347 33 QAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELA------------RGLN--- 97 (189)
Q Consensus 33 aalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elA------------RGLD--- 97 (189)
+..|-..-..|+.|+....-..+.+.+ .+++ .+..=|.+.+.+|..|...+.+|+..++ .|-+
T Consensus 8 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~-~~~~-~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~~~~~e 85 (155)
T 2fkz_A 8 IQHLNKILGNELIAINQYFLHARMYED-WGLE-KLGKHEYHESIDEMKHADKLIKRILFLEGLPNLQELGKLLIGEHTKE 85 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCCSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-CChH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCHHH
Confidence 445666667899999987766666631 1222 2333334899999999999999999881 1111
Q ss_pred -----------CcH---HHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHH
Q 041347 98 -----------VLP---TAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLC 141 (189)
Q Consensus 98 -----------v~P---~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC 141 (189)
++. .+++.-...||..++++|+. |..||..|+..=..++..+.
T Consensus 86 ~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~-~~~eee~h~~~l~~~l~~i~ 142 (155)
T 2fkz_A 86 MLECDLKLEQAGLPDLKAAIAYCESVGDYASRELLED-ILESEEDHIDWLETQLDLID 142 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 011 22333344599999999995 89999999876666655544
No 4
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=96.26 E-value=0.059 Score=39.61 Aligned_cols=97 Identities=18% Similarity=0.039 Sum_probs=66.4
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHHc-----------cCCC---
Q 041347 33 QAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELAR-----------GLNV--- 98 (189)
Q Consensus 33 aalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elAR-----------GLDv--- 98 (189)
+..|-..-..|+.|+....-..+.+.+ .++| .+-.=|.+.+.+|..|...+.+|+..++- +-++
T Consensus 12 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~-~~~~-~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~~~~e~ 89 (149)
T 2qqy_A 12 IEGLNEDLAGEYSAIIMYNHNAATVSG-IYRQ-VLKPFFESEISDEQGHALYLAEKIKTLGGTPTTIPLRVKQAEDVREM 89 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCS-TTHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCCSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-CChH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCCCCCCCCCHHHH
Confidence 445555667899999988777777741 1222 45555668999999999999999988711 0010
Q ss_pred -----------c---HHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHh
Q 041347 99 -----------L---PTAISRFRNGGDNETAELLERVVYREEITHCAA 132 (189)
Q Consensus 99 -----------~---P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~ 132 (189)
+ ..+++.-...||..+.++|+. |+.||..|+..
T Consensus 90 l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~-~~~eee~h~~~ 136 (149)
T 2qqy_A 90 LEYARQSEYETIKRYEKRKEQAANLNMTELVVKLED-MIADETNHMEE 136 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHH
Confidence 0 122223334699999999995 89999999853
No 5
>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*
Probab=96.19 E-value=0.057 Score=41.49 Aligned_cols=99 Identities=11% Similarity=0.082 Sum_probs=67.9
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH-------------------
Q 041347 32 RQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL------------------- 92 (189)
Q Consensus 32 RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el------------------- 92 (189)
-+.+|-..-..|+.|+...+-...-|. ..++ ..|-.=|.+.|.+|-.|...|.+|+..+
T Consensus 7 vi~~LN~~l~~El~A~~~Y~~~a~~~~-~~g~-~~~a~~f~~~a~eE~~HA~~l~~~i~~lGG~p~~~~~~~~~~~~~~~ 84 (159)
T 4am5_A 7 VIEYLNRGLRSELTAVSQYWLHYRMLE-DWGY-KDLAKKWRAESIEEMAHADKFVERILFLEGLPNLQTLDPLRIGQTVK 84 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCCCCSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCc-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccccchhHH
Confidence 345555566789999998764443342 1123 2455556688999999999999999988
Q ss_pred ----------HccCCCcHHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhh
Q 041347 93 ----------ARGLNVLPTAISRFRNGGDNETAELLERVVYREEITHCAAR 133 (189)
Q Consensus 93 ----------ARGLDv~P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G 133 (189)
....+.-+.+++--...||..++++|+. |+.||..|+.+=
T Consensus 85 e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~-il~eEeeH~~~l 134 (159)
T 4am5_A 85 EVLESDLAAEREARALYQEGAAYAASVGDFPSKNLFEE-LMGDEEHHIDFL 134 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHH
Confidence 1111122233445567899999999995 899999998533
No 6
>1eum_A Ferritin 1; ECFTNA, metal binding protein; 2.05A {Escherichia coli} SCOP: a.25.1.1
Probab=96.16 E-value=0.045 Score=42.61 Aligned_cols=107 Identities=13% Similarity=-0.003 Sum_probs=77.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH------------HccCCCc
Q 041347 32 RQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL------------ARGLNVL 99 (189)
Q Consensus 32 RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el------------ARGLDv~ 99 (189)
-+..|...-+.|+.|+...+-...-|. ..++| .|-.=|.+.|.+|-.|...+.+++..+ ..+.+-.
T Consensus 6 ~~~~LN~~i~~El~A~~~Yl~~a~~~~-~~gl~-~~a~~f~~~a~eE~~HA~~l~~~i~~~gg~~~l~~i~~p~~~~~~~ 83 (165)
T 1eum_A 6 MIEKLNEQMNLELYSSLLYQQMSAWCS-YHTFE-GAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFAEYSSL 83 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCCCCH
Confidence 456788889999999998875555553 24566 466666688999999999999999987 0111111
Q ss_pred ------------------HHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHH
Q 041347 100 ------------------PTAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLC 141 (189)
Q Consensus 100 ------------------P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC 141 (189)
+.+++.-...||..++..|+. ++.||+.|+..=...+..+.
T Consensus 84 ~e~l~~al~~E~~~~~~~~~l~~~a~~~~D~~~~~fl~~-~l~eq~e~~~~l~~~l~~l~ 142 (165)
T 1eum_A 84 DELFQETYKHEQLITQKINELAHAAMTNQDYPTFNFLQW-YVSEQHEEEKLFKSIIDKLS 142 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 234444556899999999994 89999999986555555553
No 7
>3pvt_A Phenylacetic acid degradation protein PAAA; protein-protein complex, ferritin-like fold, bacterial multi monooxygenase, structural genomics; HET: 3HC; 2.03A {Escherichia coli} PDB: 3pvr_A* 3pvy_A* 3pw1_A* 3pw8_C* 3pwq_C
Probab=95.86 E-value=0.01 Score=52.45 Aligned_cols=103 Identities=17% Similarity=0.095 Sum_probs=67.2
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHhhcCCCC-CCChhHHH--hHHHHHHHHHHHHHHHHHHHHHH---------------
Q 041347 31 NRQAIVHSLAHTESWAIDLSWDIIARFGKQK-AMPREFFM--DFVKVAQDKGRHFTLLAAQLEEL--------------- 92 (189)
Q Consensus 31 ~RaalLHaiAHIEl~AIdLA~Dai~RF~~~~-~lP~~Fy~--Dwl~VA~DEarHF~LL~~rL~el--------------- 92 (189)
.-+.+|-.+|+=|+.+.. |+..-- ..| .... =+..++.||..|+.+|..+|.++
T Consensus 32 ~L~~ll~~laD~ELi~~~-------rl~ew~~~AP-~Lee~iALa~ia~DE~GHa~~l~~~a~~lG~d~d~l~~~~r~~~ 103 (311)
T 3pvt_A 32 TLIRQIGQHAHSEIVGML-------PEGNWITRAP-TLRRKAILLAKVQDEAGHGLYLYSAAETLGCAREDIYQKMLDGR 103 (311)
T ss_dssp HHHHHHHHHHHHHHHTHH-------HHHTTGGGCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHTTS
T ss_pred HHHHHHHHHhhhHHHHHH-------HHHHHHhhCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcch
Confidence 345566677777776543 333111 122 2222 46789999999999999999887
Q ss_pred HccCCCc--H-------------------HHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHH
Q 041347 93 ARGLNVL--P-------------------TAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLCL 142 (189)
Q Consensus 93 ARGLDv~--P-------------------~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~ 142 (189)
.+.+.+. | .....|....+..-++++.+ |+.||-.|+..|..|+..+|+
T Consensus 104 ~~~~~lfe~P~~dWad~vvr~~l~D~~a~~~~~~L~~ss~~plA~~a~k-i~kEE~yH~~~g~~wv~rL~~ 173 (311)
T 3pvt_A 104 MKYSSIFNYPTLSWADIGVIGWLVDGAAIVNQVALCRTSYGPYARAMVK-ICKEESFHQRQGFEACMALAQ 173 (311)
T ss_dssp SCCCGGGGSCCCSHHHHHHHHHHHHHHHHHHHHTTTTCSBHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhhHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 1111100 1 01223344556677888885 899999999999999999996
No 8
>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1
Probab=95.82 E-value=0.094 Score=39.22 Aligned_cols=106 Identities=14% Similarity=0.079 Sum_probs=71.6
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHHc------------cCC---
Q 041347 33 QAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELAR------------GLN--- 97 (189)
Q Consensus 33 aalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elAR------------GLD--- 97 (189)
+..|-..-..|+.|+....-..+.|.+ .++| .+..=|.+.+.+|..|...+.+|+..++- |-|
T Consensus 8 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~-~~~~-~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~~~~~e 85 (161)
T 1jgc_A 8 IEFLNAALRSELTAISQYWVHFRLQED-WGLA-KMAKKSREESIEEMGHADKIIARILFLEGHPNLQKLDPLRIGEGPRE 85 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCCSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCCCCCHHH
Confidence 345555556899999987766677631 2232 34444567899999999999999998710 001
Q ss_pred -----------Cc---HHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHH
Q 041347 98 -----------VL---PTAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLC 141 (189)
Q Consensus 98 -----------v~---P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC 141 (189)
++ ..+++.-...||..++++|+. |+.||..|+..=..++..+-
T Consensus 86 ~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~-~~~ee~~h~~~l~~~l~~l~ 142 (161)
T 1jgc_A 86 TLECDLAGEHDALKLYREARDYCAEVGDIVSKNIFES-LITDEEGHVDFLETQISLYD 142 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 11 112222233499999999995 89999999987777775543
No 9
>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A 3kx9_A
Probab=95.79 E-value=0.059 Score=42.66 Aligned_cols=108 Identities=13% Similarity=0.041 Sum_probs=77.9
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHH----------ccCC---
Q 041347 31 NRQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELA----------RGLN--- 97 (189)
Q Consensus 31 ~RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elA----------RGLD--- 97 (189)
.-+..|....+.|+.|+...+-...=|. ..++| .|-.=+.+.|.||..|...|.+++..++ ---+
T Consensus 7 ~v~~~LN~qi~~El~as~~Yl~~a~~~~-~~~l~-g~a~~f~~~a~EE~~HA~~l~~~i~~~gg~~~l~~i~~p~~~~~~ 84 (173)
T 1s3q_A 7 KMVEALNRQINAEIYSAYLYLSMASYFD-SIGLK-GFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEPPSEWDS 84 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-HcChH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCCCC
Confidence 3467788899999999999886555554 24566 4666667789999999999999998870 0000
Q ss_pred --------------CcH---HHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHH
Q 041347 98 --------------VLP---TAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLC 141 (189)
Q Consensus 98 --------------v~P---~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC 141 (189)
++. .+++.-...+|..+...|+. ++.||+.|+..=...+..+.
T Consensus 85 ~~e~le~aL~~E~~v~~~~~~l~~~a~~~~D~~t~~fle~-~l~eq~e~~~~l~~~l~~l~ 144 (173)
T 1s3q_A 85 PLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNFLQW-YVAEQVEEEASALDIVEKLR 144 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 111 23334455689999999995 89999999986666666654
No 10
>1rcd_A L ferritin; iron storage; 2.00A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 1rcg_A 1rci_A 1rcc_A 1rce_A
Probab=95.79 E-value=0.18 Score=39.73 Aligned_cols=110 Identities=13% Similarity=0.081 Sum_probs=78.0
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHhhcCCC-CCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH----------Hc-cCC
Q 041347 30 QNRQAIVHSLAHTESWAIDLSWDIIARFGKQ-KAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL----------AR-GLN 97 (189)
Q Consensus 30 ~~RaalLHaiAHIEl~AIdLA~Dai~RF~~~-~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el----------AR-GLD 97 (189)
+.-+..|....+.|+.|+...+-...=|... .++| .|-.=+.+.|.||-.|...|.+++..+ +- --+
T Consensus 11 ~~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~-g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i~~p~~~~ 89 (173)
T 1rcd_A 11 QDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALS-NFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQSVEKPERDD 89 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCccc
Confidence 4557789999999999999988666666421 2454 566666678999999999999999998 11 011
Q ss_pred -----------------Cc---HHHHHHHHcCCCHHHHHHHH-HhhhhhhhhhHHhhhHHHHHHH
Q 041347 98 -----------------VL---PTAISRFRNGGDNETAELLE-RVVYREEITHCAARVRWFRYLC 141 (189)
Q Consensus 98 -----------------v~---P~~i~k~~~~GD~~sa~iLe-~iI~~DEI~HVa~G~rWF~~lC 141 (189)
++ -.+++.-...+|..+...|+ . ++.||+.|+..=...+.-+.
T Consensus 90 ~~~~~e~le~aL~~E~~v~~~l~~l~~~a~~~~D~~t~~fLe~~-~l~eq~e~~~~l~~~l~~l~ 153 (173)
T 1rcd_A 90 WANGLEALQTALKLQKSVNQALLDLHAVAADKSDPHMTDFLESP-YLSESVETIKKLGDHITSLK 153 (173)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 11 12233345679999999998 6 89999999965555555544
No 11
>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1
Probab=95.77 E-value=0.056 Score=42.20 Aligned_cols=112 Identities=13% Similarity=0.069 Sum_probs=78.4
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHHc------------cCCC-
Q 041347 32 RQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELAR------------GLNV- 98 (189)
Q Consensus 32 RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elAR------------GLDv- 98 (189)
-+..|....+.|++|+...+-...-|. ..++| .|-.=|.+.|.+|-.|...+.+++..++- +.+-
T Consensus 6 ~~~~Ln~~i~~El~A~~~Yl~~a~~~~-~~gl~-~~a~~f~~~a~eE~~HA~~l~~~i~~~gG~~~l~~i~~p~~~~~~~ 83 (167)
T 1krq_A 6 VVKLLNEQINKEMYAANLYLSMSSWCY-ENSLD-GAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQPEQNFKSL 83 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCH-HHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCCCCCCCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-HcCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCcCCH
Confidence 356778888999999998875555553 23566 35555667899999999999999998700 1010
Q ss_pred -----------------cHHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHHHcCCC
Q 041347 99 -----------------LPTAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLCLRSGYP 147 (189)
Q Consensus 99 -----------------~P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~~g~~ 147 (189)
-+.+++.-...||..+...|+. ++.||+.|+..=...+..+. +-|.+
T Consensus 84 ~e~l~~al~~E~~~~~~~~~l~~~a~~~~D~~~~~~l~~-~l~Eq~e~~~~l~~~l~~l~-~~g~~ 147 (167)
T 1krq_A 84 LDVFEKTYEHEQFITKSINTLVEHMLTHKDYSTFNFLQW-YVSEQHEEEALFRGIVDKIK-LIGEH 147 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHTHH-HHHHHHHHHHHHHHHHHHHH-HHCST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHH-HhCCC
Confidence 1345555567899999999996 89999999975555555543 33443
No 12
>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*
Probab=95.77 E-value=0.11 Score=39.81 Aligned_cols=106 Identities=18% Similarity=0.135 Sum_probs=73.1
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHHc------------cCCC--
Q 041347 33 QAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELAR------------GLNV-- 98 (189)
Q Consensus 33 aalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elAR------------GLDv-- 98 (189)
+..|-..-..|+.|+...+-..+.|.+ .++| ++-.=|.+.|.+|..|...+.+|+..++- +-|+
T Consensus 10 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~-~~~~-~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~i~~~~~~~~~~e 87 (174)
T 3qb9_A 10 LRLLNEQLTSELTAINQYFLHSKMQDN-WGFT-ELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRIGQTLRE 87 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCCSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC-CChH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccccCCCCCCCCCCHHH
Confidence 445556667999999987766777742 2444 45555667899999999999999998710 0011
Q ss_pred ---------------cHHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHH
Q 041347 99 ---------------LPTAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLC 141 (189)
Q Consensus 99 ---------------~P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC 141 (189)
-+.+++.-...||..+.++|+. |+.||..|+..=..++..+.
T Consensus 88 ~l~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~-~l~eEe~h~~~l~~~l~~i~ 144 (174)
T 3qb9_A 88 QFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEK-IVADEEEHIDYLETQLELMD 144 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 1112222355799999999995 89999999876666665554
No 13
>2cih_A Ferritin heavy chain; apoferritin, ferroxidase, DI-iron non-heme protein, iron storage, iron, metal-binding, oxidoreductase, phosphorylation; 1.5A {Homo sapiens} PDB: 2chi_A 2cei_A 1fha_A 2fha_A 2cn7_A 2iu2_A 2clu_A 2cn6_A 3ajo_A 3ajq_A 3ajp_A 3erz_A 3es3_A 2z6m_A 1r03_A
Probab=95.66 E-value=0.23 Score=39.70 Aligned_cols=113 Identities=12% Similarity=0.086 Sum_probs=80.1
Q ss_pred ChhhHHHHHHHHHhHHHHHHHHHHHHHhhcCCC-CCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH------------Hc
Q 041347 28 GLQNRQAIVHSLAHTESWAIDLSWDIIARFGKQ-KAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL------------AR 94 (189)
Q Consensus 28 s~~~RaalLHaiAHIEl~AIdLA~Dai~RF~~~-~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el------------AR 94 (189)
-...-+..|....+.|+.|+...+-...=|... .++| .|..=+.+.|.||-.|...|.+++..+ ..
T Consensus 13 ~~~~~~~~LN~qi~~El~As~~Yl~~a~~~~~~d~~l~-g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~ 91 (183)
T 2cih_A 13 YHQDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALK-NFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIQKPDC 91 (183)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccChH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCCCc
Confidence 335667889999999999999998666666421 2454 565656678999999999999999998 11
Q ss_pred c-CCCcH------------------HHHHHHHcCCCHHHHHHHH-HhhhhhhhhhHHhhhHHHHHHHH
Q 041347 95 G-LNVLP------------------TAISRFRNGGDNETAELLE-RVVYREEITHCAARVRWFRYLCL 142 (189)
Q Consensus 95 G-LDv~P------------------~~i~k~~~~GD~~sa~iLe-~iI~~DEI~HVa~G~rWF~~lC~ 142 (189)
+ -.-.. .+++.-...+|..+...|+ . ++.||+.|++.=...+..+..
T Consensus 92 ~~~~~~~e~le~aL~~Ek~v~~~l~~l~~~a~~~~D~~t~~fLe~~-fl~eq~e~~~~l~~~l~~l~~ 158 (183)
T 2cih_A 92 DDWESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETH-YLNEQVKAIKELGDHVTNLRK 158 (183)
T ss_dssp SCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH-THHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 1 00111 1222334679999999999 5 899999999766566665543
No 14
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=95.54 E-value=0.12 Score=39.95 Aligned_cols=102 Identities=23% Similarity=0.213 Sum_probs=68.8
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHH------------ccCCCc-
Q 041347 33 QAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELA------------RGLNVL- 99 (189)
Q Consensus 33 aalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elA------------RGLDv~- 99 (189)
+..|-..-..|+.|+...+-..+.|.. .++| .+-.=|.+.|.+|..|...+.+|+..++ -|-|+.
T Consensus 13 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~-~~~~-~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~~~~~e 90 (179)
T 1nfv_A 13 IEVLNKARAMELHAIHQYMNQHYSLDD-MDYG-ELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPV 90 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-TTBH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSSCCCCSCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCcCCCCCcCCCCCCHHH
Confidence 345555667999999988777777742 2343 4555566789999999999999999871 111111
Q ss_pred ----------------HHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHH
Q 041347 100 ----------------PTAISRFRNGGDNETAELLERVVYREEITHCAARVRWF 137 (189)
Q Consensus 100 ----------------P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF 137 (189)
..+++.....||..+.++|+. |..||..|+.+=..++
T Consensus 91 ~l~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~-~~~eEe~h~~~l~~~l 143 (179)
T 1nfv_A 91 IYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFER-IIEEEQAHLTYYENIG 143 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 111222235799999999995 8999999984433333
No 15
>3qz3_A Ferritin; structural genomics, the center for structural genomics of I diseases, csgid, cytoplasmic, oxidoreductase; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: a.25.1.1
Probab=95.44 E-value=0.16 Score=40.75 Aligned_cols=111 Identities=14% Similarity=0.002 Sum_probs=78.7
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHH-----------c----
Q 041347 30 QNRQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELA-----------R---- 94 (189)
Q Consensus 30 ~~RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elA-----------R---- 94 (189)
..-...|-...+.|+.|+...+-...=|. ..++| .|-.=|.+.|.||..|...|.+|+..++ +
T Consensus 13 ~~v~~~LN~qin~EL~as~~Yl~~a~~f~-~~~l~-g~a~~f~~~a~EE~~HA~~l~~~i~~~Gg~~~l~~i~~p~~~~~ 90 (184)
T 3qz3_A 13 QAMVEHLNEQINLEFFSSNLYLQMSAWCE-DKGFD-GAAEFLRAHAVEEMQHMQRLFTYVSETGALPILGAIAAPRHDFA 90 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcChH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCCcccCcC
Confidence 34567788889999999999886665564 23344 5555566789999999999999999880 0
Q ss_pred -cCC-----------CcH---HHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHHH
Q 041347 95 -GLN-----------VLP---TAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLCLR 143 (189)
Q Consensus 95 -GLD-----------v~P---~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~ 143 (189)
+++ ++. .+++.-...+|..+...|+ -++.|++.|+..=...+..++.-
T Consensus 91 ~~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe-~fl~EQve~~~~l~~~l~~l~~~ 153 (184)
T 3qz3_A 91 SLGEVFRETYQHEQKITQQINKLAHVAFTSQDYSTFNFLQ-WYVAEQHEEEKLFKGILDKLELV 153 (184)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 000 011 1122234579999999999 48999999998777777766643
No 16
>3oj5_A Ferritin family protein; ferroxidase, cytosol, oxidoreductase; 2.85A {Mycobacterium tuberculosis} PDB: 3qd8_A
Probab=95.24 E-value=0.26 Score=38.97 Aligned_cols=102 Identities=18% Similarity=0.205 Sum_probs=69.6
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH-H-----------ccC-CC
Q 041347 32 RQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL-A-----------RGL-NV 98 (189)
Q Consensus 32 RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el-A-----------RGL-Dv 98 (189)
-+..|-..-.-|+.|+.+.+-..+=|. ..++| .|-.=|-+.+.+|..|...+.+|+..+ + -+. |+
T Consensus 11 v~~~LN~~la~El~a~~~Yl~~a~~~~-~~gf~-~l~~~f~~~a~ee~~Had~laeri~~lGg~p~~~~i~~~~~~~~~~ 88 (189)
T 3oj5_A 11 FHALMQEQIHNEFTAAQQYVAIAVYFD-SEDLP-QLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQFDRP 88 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCCCCCCCH
Confidence 456677778899999998775444442 23443 455556678999999999999999998 0 111 11
Q ss_pred c-----------------HHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHH
Q 041347 99 L-----------------PTAISRFRNGGDNETAELLERVVYREEITHCAARVRW 136 (189)
Q Consensus 99 ~-----------------P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rW 136 (189)
. ..+++.-...||..++++|+. |+.||..|+..=..+
T Consensus 89 ~e~l~~~l~~E~~~~~~~~~l~~~A~~~~D~~t~~~l~~-~l~eqe~~~~~l~~~ 142 (189)
T 3oj5_A 89 REALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQW-FLQEQIEEVALMATL 142 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHH-HHHHHHHHHHHHHHH
Confidence 1 112333456799999999995 899999998643333
No 17
>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A
Probab=95.21 E-value=0.16 Score=38.14 Aligned_cols=96 Identities=15% Similarity=0.141 Sum_probs=63.5
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHH-c----------cCCCcH-
Q 041347 33 QAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELA-R----------GLNVLP- 100 (189)
Q Consensus 33 aalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elA-R----------GLDv~P- 100 (189)
+..|-..-.-|+.|+...+-..+.|.+ .++ ..+-.=|-+.+.+|..|...+.+|+..++ . |-++..
T Consensus 8 ~~~Ln~~la~E~~a~~~Y~~~a~~~~~-~~~-~~l~~~f~~~a~ee~~had~l~eri~~lGg~p~~~~~~~~~~~~~~e~ 85 (154)
T 3r2k_A 8 IDYLNTLLTGELAARDQYFIHSRMYED-WGF-SKLYERLNHEMEEETQHADALLRRILLLEGTPRMRPDDIHPGTTVPEM 85 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-TTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCCSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHH
Confidence 344545555699999987655555631 122 23444456789999999999999999981 1 111111
Q ss_pred ----------------HHHHHHHcCCCHHHHHHHHHhhhhh-hhhhHH
Q 041347 101 ----------------TAISRFRNGGDNETAELLERVVYRE-EITHCA 131 (189)
Q Consensus 101 ----------------~~i~k~~~~GD~~sa~iLe~iI~~D-EI~HVa 131 (189)
.+++.-...||..++++|+. |..| |..|+.
T Consensus 86 l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~-~~~e~ee~h~~ 132 (154)
T 3r2k_A 86 LEADLKLERHVRAALAKGIALCEQHKDFVSRDILKA-QLADTEEDHAY 132 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHH
Confidence 12223334699999999995 8899 999984
No 18
>2v2p_A Ferritin light chain; metal transport, iron, haemin, apoferritin, iron storage, metal-binding; 1.15A {Equus caballus} PDB: 2v2r_A 2v2m_A 2v2l_A 2v2s_A 2v2o_A 2v2n_A 2za6_A 2v2j_A 2v2i_A 2z5p_A 1dat_A 2g4h_A 1aew_A 3h7g_A 2zg9_X 2zg8_X 3fi6_A 3o7r_A 2w0o_A 1hrs_A* ...
Probab=94.94 E-value=0.69 Score=36.38 Aligned_cols=111 Identities=14% Similarity=0.020 Sum_probs=77.2
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHhhcCCC-CCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH----------Hc-cCC
Q 041347 30 QNRQAIVHSLAHTESWAIDLSWDIIARFGKQ-KAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL----------AR-GLN 97 (189)
Q Consensus 30 ~~RaalLHaiAHIEl~AIdLA~Dai~RF~~~-~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el----------AR-GLD 97 (189)
+.-+..|....+.|+.|+...+-...=|... .++| .|-.=+.+.|.||-.|...|.+++..+ +- --+
T Consensus 10 ~~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~-g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i~~p~~~~ 88 (174)
T 2v2p_A 10 TEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALE-GVCHFFRQLAQQKMQGAERLLKMQNQRGGRALFQDLQKPSQDE 88 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Confidence 3456788999999999999988666556421 2344 555555678999999999999999998 11 111
Q ss_pred -----------------CcH---HHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHH
Q 041347 98 -----------------VLP---TAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLC 141 (189)
Q Consensus 98 -----------------v~P---~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC 141 (189)
|+. .+++.-...+|..+...|+.-++.||+.|+..=...+.-+.
T Consensus 89 ~~~~~e~le~aL~~Ek~v~~~l~~l~~~a~~~~D~~t~~fLe~~~l~eq~e~~~~l~~~l~~l~ 152 (174)
T 2v2p_A 89 WGTTPDAMKAAIVLEKSLNQALLDLHALGSAQADPHLCDFLESHFLDEEVKLIKKMGDHLTNIQ 152 (174)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 22233345799999999993289999999876555555554
No 19
>3ka8_A Ferritin, middle subunit; iron storage, DIIRON, iron, metal-binding, oxidoreductase; 1.35A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 3ka9_A 3ka3_A 1mfr_A 3ka4_A 3rbc_A 3re7_A 3rgd_A 4das_A* 3ka6_A 3shx_A 3sh6_A 3se1_A 1bg7_A
Probab=94.91 E-value=0.69 Score=36.66 Aligned_cols=112 Identities=16% Similarity=0.125 Sum_probs=79.7
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHhhcCC-CCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHH------------cc--
Q 041347 31 NRQAIVHSLAHTESWAIDLSWDIIARFGK-QKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELA------------RG-- 95 (189)
Q Consensus 31 ~RaalLHaiAHIEl~AIdLA~Dai~RF~~-~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elA------------RG-- 95 (189)
.-...|....+.|+.|+.+.+-...=|.. ..++| .|-.=|.+.|.||-.|...|.+++..++ ++
T Consensus 12 ~v~~~LN~qin~El~As~~Yl~ma~~f~~~d~~l~-g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~~ 90 (176)
T 3ka8_A 12 DCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALH-NVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVLQDIKKPERDEW 90 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCcccCCCcccc
Confidence 45678888999999999999876666641 12344 5666666789999999999999999881 11
Q ss_pred ---CC-----------CcH---HHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHHH
Q 041347 96 ---LN-----------VLP---TAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLCLR 143 (189)
Q Consensus 96 ---LD-----------v~P---~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~ 143 (189)
++ ++. .+++--...+|..+...|+.-++.|++.|++.=...+..++.-
T Consensus 91 ~~~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~~fl~eQve~~~~l~~~l~~l~~~ 155 (176)
T 3ka8_A 91 GNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLCDFLESEYLEEQVKHIKRIGDFITNLKRL 155 (176)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 01 111 1122234579999999999228999999998777777777653
No 20
>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1
Probab=94.90 E-value=0.22 Score=37.85 Aligned_cols=98 Identities=18% Similarity=0.102 Sum_probs=70.0
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHH--H-----------------
Q 041347 32 RQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEE--L----------------- 92 (189)
Q Consensus 32 RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~e--l----------------- 92 (189)
-+..|-..-.-|+.|++..+-...-+. ..++|. +-.=+.+.|.+|..|...+-++|.. +
T Consensus 9 ~~~~Ln~a~~~E~~A~~~Y~~~A~~a~-~~g~~~-~a~~f~~~A~eE~~HA~~~~~~l~~~~lg~p~~~~p~~~~~e~L~ 86 (144)
T 1j30_A 9 TAENLKQGFIGESMANRRYLYFAKRAD-EEGYPE-IAGLLRSIAEGETAHAFGHLDFIRQGGLTDPATDKPIGTLEQMIE 86 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTCHH-HHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTTSCBCSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcCCCCccHHHHHH
Confidence 445666667889999998764333332 224443 4444557899999999999999987 2
Q ss_pred ------Hcc-CCCcHHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHh
Q 041347 93 ------ARG-LNVLPTAISRFRNGGDNETAELLERVVYREEITHCAA 132 (189)
Q Consensus 93 ------ARG-LDv~P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~ 132 (189)
..- .+.=|.+++.-+..||..++++++. |..+|..|...
T Consensus 87 ~al~~E~~~~~~~y~~~~~~A~~egd~~~~~~f~~-i~~~E~~H~~~ 132 (144)
T 1j30_A 87 SAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFET-LARAEKSHAEK 132 (144)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH-HHHHHHHHHHH
Confidence 111 2333666777788999999999994 89999999753
No 21
>3a68_A Sferh-4, ferritin-4, chloroplastic; 4-helix bundle, iron storage, CAGE-like protein, plant, iron, metal-binding, oxidoreductase, plastid; 1.80A {Glycine max} PDB: 3a9q_A
Probab=94.72 E-value=1.3 Score=36.32 Aligned_cols=112 Identities=13% Similarity=0.129 Sum_probs=78.3
Q ss_pred ChhhHHHHHHHHHhHHHHHHHHHHHHHhhcCCC-CCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH------------Hc
Q 041347 28 GLQNRQAIVHSLAHTESWAIDLSWDIIARFGKQ-KAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL------------AR 94 (189)
Q Consensus 28 s~~~RaalLHaiAHIEl~AIdLA~Dai~RF~~~-~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el------------AR 94 (189)
-.+.-+..|....+.||.|+.+.+-...=|... .++| .|-.=+.+.+.||-.|...|.+++..+ -.
T Consensus 41 ~~~~v~~~LN~qin~El~As~~Yl~ma~~f~~~~v~l~-g~a~~f~~~s~EE~~HA~kl~~yi~~rGG~~~l~~i~~p~~ 119 (212)
T 3a68_A 41 YVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALR-GLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLS 119 (212)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCBCCCCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcccchH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCcCCCCC
Confidence 445678889999999999999998666666421 1344 555556678999999999999999998 11
Q ss_pred cCC--------------------CcH---HHHHHHHcCCCHHHHHHHH-HhhhhhhhhhHHhhhHHHHHHH
Q 041347 95 GLN--------------------VLP---TAISRFRNGGDNETAELLE-RVVYREEITHCAARVRWFRYLC 141 (189)
Q Consensus 95 GLD--------------------v~P---~~i~k~~~~GD~~sa~iLe-~iI~~DEI~HVa~G~rWF~~lC 141 (189)
|-+ ++. .+++.-...+|..+...|+ . ++.||+.|++.=...+..+.
T Consensus 120 ~~~~~e~~~~~e~le~aL~~Ek~v~~~l~~l~~~A~~~~D~~t~~fLe~~-fL~EQve~~~~l~~~l~~l~ 189 (212)
T 3a68_A 120 DFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETE-YLGEQVEAIKRISEYVAQLR 189 (212)
T ss_dssp CCCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH-THHHHHHHHHHHHHHHHHHH
T ss_pred CcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 111 011 1222334679999999998 6 89999999954444444443
No 22
>3bvf_A Ferritin; iron storage, metal-binding, oxidoreductase; 1.50A {Helicobacter pylori} PDB: 3bve_A 3bvi_A 3bvk_A 3bvl_A 3egm_A
Probab=94.60 E-value=0.31 Score=38.59 Aligned_cols=100 Identities=11% Similarity=0.060 Sum_probs=70.2
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHH------------ccCC
Q 041347 30 QNRQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELA------------RGLN 97 (189)
Q Consensus 30 ~~RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elA------------RGLD 97 (189)
..-...|-...+.|++|+.+.+-...=| ...++| .|-.=|.+.|.+|..|...+.+|+..++ -+..
T Consensus 18 ~~~~~~LN~~i~~El~a~~~Yl~~a~~~-~~~gl~-~~a~~f~~~a~EE~~HA~~l~e~i~~lGG~p~l~~i~~p~~~~~ 95 (181)
T 3bvf_A 18 KDIIKLLNEQVNKEMNSSNLYMSMSSWC-YTHSLD-GAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAPEHKFE 95 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCCC
Confidence 4456677888899999999877444444 334555 4556666789999999999999999880 0111
Q ss_pred C------------------cHHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHh
Q 041347 98 V------------------LPTAISRFRNGGDNETAELLERVVYREEITHCAA 132 (189)
Q Consensus 98 v------------------~P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~ 132 (189)
- -+.+++.-...||..++..|+. |+.|++.+...
T Consensus 96 ~~~e~le~aL~~E~~~~~~~~~l~~~A~~~~D~~t~~~l~~-~l~eqvEe~~~ 147 (181)
T 3bvf_A 96 GLTQIFQKAYEHEQHISESINNIVDHAIKSKDHATFNFLQW-YVAEQHEEEVL 147 (181)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHTHH-HHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHH-HHHHHHHHHHH
Confidence 1 1233334456799999999995 89897777763
No 23
>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1
Probab=94.59 E-value=0.28 Score=36.95 Aligned_cols=105 Identities=13% Similarity=0.044 Sum_probs=67.3
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHH------------ccCC---
Q 041347 33 QAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELA------------RGLN--- 97 (189)
Q Consensus 33 aalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elA------------RGLD--- 97 (189)
+..|-..-.-|+.|+...+-..+.+. ..+++ .+-.=|.+.+.+|..|...+.+|+..++ -|-+
T Consensus 8 ~~~Ln~~la~E~~a~~~Y~~~a~~~~-~~~~~-~l~~~f~~~a~ee~~Had~l~eri~~lGg~p~~~~~~~~~~~~~~~e 85 (161)
T 3gvy_A 8 IEYLNAALRSELTAVSQYWLHYRLQE-DWGFG-SIAHKSRKESIEEMHHADKLIQRIIFLGGHPNLQRLNPLRIGQTLRE 85 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCT-THHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCCSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCccCCCCCCCCCCCHHH
Confidence 34455555569999998754444442 11233 3444456789999999999999999981 0101
Q ss_pred -----------CcHH---HHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHH
Q 041347 98 -----------VLPT---AISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYL 140 (189)
Q Consensus 98 -----------v~P~---~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~l 140 (189)
++.. +++.-...||..++++|+. |..||-.|+.+=..++.-+
T Consensus 86 ~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~-~~~eEe~h~~~l~~~l~~i 141 (161)
T 3gvy_A 86 TLDADLAAEHDARTLYIEARDHCEKVRDYPSKMLFEE-LIADEEGHIDYLETQIDLM 141 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHTTHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 1111 1112234899999999995 8999999986655555433
No 24
>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*
Probab=94.55 E-value=0.5 Score=35.46 Aligned_cols=105 Identities=17% Similarity=0.122 Sum_probs=68.0
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHH------------ccCCCc-
Q 041347 33 QAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELA------------RGLNVL- 99 (189)
Q Consensus 33 aalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elA------------RGLDv~- 99 (189)
+..|-..-.-|+.|+...+-..+.|.+ .++| .+-.=|-+.+.+|..|...+.+|+..++ .|-++.
T Consensus 10 ~~~Ln~~la~E~~a~~~Y~~~a~~~~~-~~~~-~l~~~f~~~a~ee~~Had~l~e~i~~lGg~p~~~~~~~~~~~~~~~e 87 (161)
T 3uoi_A 10 LRLLNEQLTSELTAINQYFLHSKMQDN-WGFT-ELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRIGQTLRE 87 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCCSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCCCCCCCCHHH
Confidence 445555556699999987655555531 1222 3444456789999999999999999881 110100
Q ss_pred ----------------HHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHH
Q 041347 100 ----------------PTAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYL 140 (189)
Q Consensus 100 ----------------P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~l 140 (189)
..+++.-...||..++++|+. |..||..|+.+=..++..+
T Consensus 88 ~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~-~~~eee~h~~~l~~~l~~i 143 (161)
T 3uoi_A 88 QFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEK-IVADEEEHIDYLETQLELM 143 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 012222345699999999995 8999999986544444433
No 25
>2inc_A Toluene, O-xylene monooxygenase oxygenase subunit; DIIRON, 4-helix bundle, carboxylate bridge, metalloenzyme, oxidoreductase; HET: P6G; 1.85A {Pseudomonas stutzeri} SCOP: a.25.1.2 PDB: 2ind_A* 1t0q_A 1t0r_A 1t0s_A 3n1z_A* 3rnf_A* 3n20_A* 3rnc_A 3rn9_A* 3n1x_A 3rne_A 2rdb_A* 3n1y_A* 3rnb_A 3rng_A 3rna_A
Probab=94.51 E-value=0.54 Score=43.70 Aligned_cols=102 Identities=16% Similarity=0.025 Sum_probs=72.0
Q ss_pred HHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH------------------------
Q 041347 37 HSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL------------------------ 92 (189)
Q Consensus 37 HaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el------------------------ 92 (189)
=.+.|-|+.|.--... +.|+. .-..-..--...+.||.||..+..-++.++
T Consensus 97 ~~~~~~Ey~a~~~~a~-~~r~a----p~~~~rnaaa~q~lDElRHaQ~~~~~~~el~~~~~~~~~f~~~~~~~~p~~~~~ 171 (491)
T 2inc_A 97 GAIALEEYAASTAEAR-MARFA----KAPGNRNMATFGMMDENRHGQIQLYFPYANVKRSRKWDWAHKAIHTNEWAAIAA 171 (491)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHC----SCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGCGGGGHHHHGGGSCCHHHHHH
T ss_pred hhhhHHHHHHHHHHHH-HHHhC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhcccccHHHhhcCcccHHH
Confidence 3566999999986654 46774 122223334456779999999988766664
Q ss_pred ------------------HccCCCcH--------HHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHHHc
Q 041347 93 ------------------ARGLNVLP--------TAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLCLRS 144 (189)
Q Consensus 93 ------------------ARGLDv~P--------~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~~ 144 (189)
|-+|=+-| .+..--...||..+..++. -|..||-.|++.|...+++++++.
T Consensus 172 R~~~ed~~~t~D~~E~~ialnlv~E~~~tnll~~~f~~~Aa~nGD~lt~~v~~-siq~DEaRH~~~g~~ll~~ll~d~ 248 (491)
T 2inc_A 172 RSFFDDMMMTRDSVAVSIMLTFAFETGFTNMQFLGLAADAAEAGDHTFASLIS-SIQTDESRHAQQGGPSLKILVENG 248 (491)
T ss_dssp HHHHHHHTTSSCHHHHHHHCCCCCCCTTHHHHHHHHHHHHHHTTCHHHHHHHH-HHHHHHHHHHTTHHHHHHHHHHTT
T ss_pred HHHHHHhhccccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHcCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCc
Confidence 22332223 1233334679999999999 489999999999999999999873
No 26
>2jd6_0 Ferritin homolog, ferritin; metal transport, iron, pores, archaeon, entry channels, thermostability, hyperthermophIle, ferroxidase center; 2.75A {Pyrococcus furiosus} PDB: 2jd7_0 2jd8_0 2x17_0
Probab=94.35 E-value=0.5 Score=36.38 Aligned_cols=105 Identities=13% Similarity=0.086 Sum_probs=70.4
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH-H-----------ccCCCc-
Q 041347 33 QAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL-A-----------RGLNVL- 99 (189)
Q Consensus 33 aalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el-A-----------RGLDv~- 99 (189)
+..|-..-+-|+.|+.+.+-..+=|. ..++| .|-.=|-+.+.+|..|...+.+|+..+ + -+..-.
T Consensus 7 ~~~Ln~~l~~El~a~~~Yl~~a~~~~-~~~~~-~l~~~f~~~a~ee~~had~laeri~~lGg~p~~~~i~~~~~~~~~~~ 84 (174)
T 2jd6_0 7 LKALNDQLNRELYSAYLYFAMAAYFE-DLGLE-GFANWMKAQAEEEIGHALRFYNYIYDRNGRVELDEIPKPPKEWESPL 84 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-hCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcCcCCHH
Confidence 45677777899999998775544442 12333 355555678999999999999999988 0 111111
Q ss_pred -----------------HHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHH
Q 041347 100 -----------------PTAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYL 140 (189)
Q Consensus 100 -----------------P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~l 140 (189)
..+++.-...||..++++|+. |+.||..|+..=..++..+
T Consensus 85 e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~-~l~eq~e~~~~l~~~l~~l 141 (174)
T 2jd6_0 85 KAFEAAYEHEKFISKSIYELAALAEEEKDYSTRAFLEW-FINEQVEEEASVKKILDKL 141 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHTHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 123333445799999999995 8999999987533333333
No 27
>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}
Probab=93.85 E-value=1.2 Score=33.41 Aligned_cols=105 Identities=16% Similarity=0.127 Sum_probs=70.2
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHHc------------------
Q 041347 33 QAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELAR------------------ 94 (189)
Q Consensus 33 aalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elAR------------------ 94 (189)
+..|-..-.-|+.|+....-..+-|.. .+++ .+..=+-+.+.+|..|...+.+|+..++-
T Consensus 19 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~-~~~~-~l~~~f~~~a~ee~~Had~lae~i~~lGg~p~~~~~~~~~~~~~~~~ 96 (170)
T 2vzb_A 19 IDQLNAALSEEWLAYYQYWVGALVVEG-AMRA-DVQGEFEEHAEEERHHAQLIADRIIELEGVPVLDPKKWFELARCKYD 96 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCBS-TTHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCGGGHHHHCSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCHHHHHHhhcCCCC
Confidence 556777778999999988877777741 2222 45556668899999999999999998710
Q ss_pred cCC-Cc----------------HHHHHHH--HcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHH
Q 041347 95 GLN-VL----------------PTAISRF--RNGGDNETAELLERVVYREEITHCAARVRWFRYL 140 (189)
Q Consensus 95 GLD-v~----------------P~~i~k~--~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~l 140 (189)
.-+ .+ ..+.+-. ....|..++++|+. |+.||..|+..=..++..+
T Consensus 97 ~~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~D~~t~~~l~~-~~~ee~~h~~~l~~~l~~l 160 (170)
T 2vzb_A 97 SPTAFDSVSLLNQNVSSERCAILRYQEIANFTNGKDYTTCDIAKH-ILAEEEEHEQDLQDYLTDI 160 (170)
T ss_dssp CCCSCBHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 010 11 1111111 12228899999984 8999999987655555544
No 28
>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}
Probab=93.78 E-value=0.47 Score=37.23 Aligned_cols=104 Identities=14% Similarity=0.065 Sum_probs=67.7
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHH------------ccCCCc
Q 041347 32 RQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELA------------RGLNVL 99 (189)
Q Consensus 32 RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elA------------RGLDv~ 99 (189)
-+..|-..-.-|+.|+...+-..+.|.. .++ ..+-.=|.+.+.+|..|...+.+|+..++ .|-++.
T Consensus 28 ~~~~LN~~la~E~~a~~~Y~~~a~~~~~-~~~-~~l~~~f~~~a~eE~~Had~laeri~~lGg~p~~~~~~~~~~~~~~~ 105 (182)
T 3fvb_A 28 VIERLNEALFLELGAVNQYWLHYRLLND-WGY-TRLAKKEREESIEEMHHADKLIDRIIFLEGFPNLQTVSPLRIGQNVK 105 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCCCCSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcCCCCCCCCCCCCHH
Confidence 3445555556799999987655565631 122 24445566889999999999999999981 111111
Q ss_pred H----------HHHH-------HHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHH
Q 041347 100 P----------TAIS-------RFRNGGDNETAELLERVVYREEITHCAARVRWFR 138 (189)
Q Consensus 100 P----------~~i~-------k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~ 138 (189)
. ..++ .-...||..++++|+. |..||..|+.+=..++.
T Consensus 106 e~l~~~l~~E~~~~~~y~~~i~~A~~~~D~~t~~~L~~-il~eEe~h~~~l~~~l~ 160 (182)
T 3fvb_A 106 EVLEADLKGEYDARASYKESREICDKLGDYVSKQLFDE-LLADEEGHIDFLETQLD 160 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 1 0111 2224799999999995 88999999865555544
No 29
>1otk_A Protein PAAC, phenylacetic acid degradation protein PAAC; structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: a.25.1.2 PDB: 3pvt_B* 3pvr_B* 3pvy_B* 3pw1_B* 3pw8_A* 3pwq_A
Probab=93.44 E-value=0.15 Score=43.73 Aligned_cols=71 Identities=18% Similarity=0.230 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-Hcc----------------C--------CCcH-------------HHHHHHHcCCCH
Q 041347 71 FVKVAQDKGRHFTLLAAQLEEL-ARG----------------L--------NVLP-------------TAISRFRNGGDN 112 (189)
Q Consensus 71 wl~VA~DEarHF~LL~~rL~el-ARG----------------L--------Dv~P-------------~~i~k~~~~GD~ 112 (189)
+..++.||.-|.+++-+.+.++ +.| + |..- .....|.+..|.
T Consensus 39 lanialDelGhar~ly~~a~~l~G~~~~D~La~~R~~~~frn~~l~e~P~gdwa~ti~r~~l~d~~~~~~~~~L~~ss~~ 118 (249)
T 1otk_A 39 LANIGLDLLGQARNFLSYAAELAGEGDEDTLAFTRDERQFSNLLLVEQPNGNFADTIARQYFIDAWHVALFTRLMESRDP 118 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHSCCGGGCCCCGGGGSCCCSHHHHHHHHHHHHHHHHHHHHHHTTCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHhcCHHHhhccHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 6699999999999999999988 332 2 2222 234567788888
Q ss_pred HHHHHHHHhhhhhhhhhHHhhhHHHHHHHH
Q 041347 113 ETAELLERVVYREEITHCAARVRWFRYLCL 142 (189)
Q Consensus 113 ~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~ 142 (189)
.-++|+.| |..||--|+..|..|+..|++
T Consensus 119 plA~ia~K-~~kEe~yH~~h~~~w~~rL~~ 147 (249)
T 1otk_A 119 QLAAISAK-AIKEARYHLRFSRGWLERLGN 147 (249)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHc
Confidence 88999996 899999999999999999994
No 30
>3e6s_A Ferritin; iron storage, ferroxidase, oxidoreductase; 1.95A {Pseudo-nitzschia multiseries} SCOP: a.25.1.1 PDB: 3e6r_A
Probab=93.08 E-value=0.98 Score=35.58 Aligned_cols=114 Identities=6% Similarity=-0.056 Sum_probs=78.7
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH-Hc-------------cC
Q 041347 31 NRQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL-AR-------------GL 96 (189)
Q Consensus 31 ~RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el-AR-------------GL 96 (189)
.-+..|....+.|+.|+...+-..+=|. ..++| .|-.=|.+.|.||-.|...|.+++..+ ++ .-
T Consensus 4 ~v~~~LN~qin~El~As~~Yl~ma~~f~-~~~l~-g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~~~ 81 (168)
T 3e6s_A 4 ELLDLFNRQVTQEFTASQVYLSASIWFD-QNDWE-GMAAYMLAESAEEREHGLGFVDFANKRNIPIELQAVPAPVSCAEW 81 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC-cCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcCCCCccccC
Confidence 3467888999999999999886665564 23553 566666788999999999999999887 00 01
Q ss_pred CCcHHH------------------HHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHHHcCCCC
Q 041347 97 NVLPTA------------------ISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLCLRSGYPT 148 (189)
Q Consensus 97 Dv~P~~------------------i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~~g~~p 148 (189)
.....+ ++--...+|..+...|+. ++.|++.|++.=...+..+. +-|.+|
T Consensus 82 ~~~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~-fl~eQve~~~~l~~~l~~l~-~~g~~~ 149 (168)
T 3e6s_A 82 SSPEDVWQSILELEQANTRSLLNLAEAASTCHDFAVMAFLNP-FHLQQVNEEDKIGSILAKVT-DENRTP 149 (168)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-HHTTST
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHHH-HhCCCc
Confidence 111111 111235789999999995 89999999976555555554 345544
No 31
>1vlg_A Ferritin; TM1128, structural genomics, JCSG, protein structu initiative, PSI, joint center for structural genomics, META protein; 2.00A {Thermotoga maritima} SCOP: a.25.1.1 PDB: 1z4a_A*
Probab=92.37 E-value=0.88 Score=35.46 Aligned_cols=99 Identities=14% Similarity=0.125 Sum_probs=67.2
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHH------------ccCC
Q 041347 30 QNRQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELA------------RGLN 97 (189)
Q Consensus 30 ~~RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elA------------RGLD 97 (189)
+.-+..|-..-+-|+.|+.+.+-...=|. ..++| .|-.=|-+.+.+|..|...+.+|+..++ -+..
T Consensus 18 ~~~~~~Ln~~l~~El~a~~~Yl~~a~~~~-~~~~~-~la~~f~~~a~EE~~HAd~l~eri~~lGg~~~l~~i~~p~~~~~ 95 (176)
T 1vlg_A 18 EKVRKALNDQLNREIYSSYLYLSMATYFD-AEGFK-GFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIEKPPSNWN 95 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCCCCCC
Confidence 34566777788899999987653322242 12444 3555556789999999999999999880 0111
Q ss_pred Cc------------------HHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHH
Q 041347 98 VL------------------PTAISRFRNGGDNETAELLERVVYREEITHCA 131 (189)
Q Consensus 98 v~------------------P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa 131 (189)
-. ..+++.-...||..++.+|+. ++.|++.+..
T Consensus 96 ~~~e~le~~l~~E~~v~~~~~~l~~~A~~~~D~~t~~~l~~-~l~eq~ee~~ 146 (176)
T 1vlg_A 96 GIKDAFEAALKHEEFVTQSIYNILELASEEKDHATVSFLKW-FVDEQVEEED 146 (176)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHH-HHHHHHHHHH
Confidence 11 123334456799999999995 8889888876
No 32
>3kxu_A Ferritin; iron storage protein, disorder, iron, metal binding protein; 1.85A {Homo sapiens} PDB: 3hx2_A 3hx5_A 3hx7_A
Probab=92.13 E-value=3.2 Score=33.56 Aligned_cols=111 Identities=15% Similarity=0.061 Sum_probs=76.4
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHhhcCC-CCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHH------------c---
Q 041347 31 NRQAIVHSLAHTESWAIDLSWDIIARFGK-QKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELA------------R--- 94 (189)
Q Consensus 31 ~RaalLHaiAHIEl~AIdLA~Dai~RF~~-~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elA------------R--- 94 (189)
.-...|....+.|+.|+++.+-..+=|.. ..++| .|-.=|.+.+.||-.|...|.+++...+ .
T Consensus 12 ~v~~~LN~qin~EL~As~~Ylsma~~f~~~d~~l~-g~a~~f~~~s~EE~~HA~kl~~yi~~rgG~~~l~~i~~p~~~~~ 90 (191)
T 3kxu_A 12 DVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALE-GVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEW 90 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCcCCCCcccc
Confidence 45678899999999999998876666641 12344 4544455788899999999999999871 0
Q ss_pred --cCC-----------CcH---HHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHH
Q 041347 95 --GLN-----------VLP---TAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLCL 142 (189)
Q Consensus 95 --GLD-----------v~P---~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~ 142 (189)
+++ ||. .+++.-...+|..+...|+.-++.|++.|++.=..-+..++.
T Consensus 91 ~s~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~~fL~EQve~i~~l~~~l~~l~~ 154 (191)
T 3kxu_A 91 GKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHR 154 (191)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011 111 112223457999999999822899999998765555555554
No 33
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=91.91 E-value=3.3 Score=31.76 Aligned_cols=104 Identities=13% Similarity=0.086 Sum_probs=72.3
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHHcc-------------------
Q 041347 35 IVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELARG------------------- 95 (189)
Q Consensus 35 lLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elARG------------------- 95 (189)
+|-.....|..|++......-+.. + .+...=|.+.|.+|.+|...+.+++..+.-|
T Consensus 24 ~L~~A~~~E~~a~~~Y~~~A~~~~---~--~~~~~~f~~lA~~E~~H~~~l~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 98 (175)
T 2fzf_A 24 LLGMAIKAEIGAREFYKSLAEKIK---I--EALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPKEHIGPELQPVAR 98 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCC---C--TTHHHHHHHHHHHTHHHHHHHHHHHHHHSTTCCCCCCSCCBSCCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC---C--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhhhhhhHH
Confidence 444445679999998765555443 2 4566667789999999999999999987111
Q ss_pred -CCCcHHH------------------HHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHHHc
Q 041347 96 -LNVLPTA------------------ISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLCLRS 144 (189)
Q Consensus 96 -LDv~P~~------------------i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~~ 144 (189)
+.....+ -+-...+.|.+..++++. |..||-.|...=.+++..+.+..
T Consensus 99 ~~~~~~~~~~~L~~ai~~E~~a~~~Y~~~a~~~~d~~~r~l~~~-ia~eE~~H~~~l~~~l~~l~~~~ 165 (175)
T 2fzf_A 99 ELEKVQDIIDLIRWAMKAEEIAAEFYLKLEEMVKEEEKKRLMRY-LADMERGHYYTLRAEYELLLNWE 165 (175)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hccccCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHH
Confidence 1111111 122334678888999995 89999999988777777776653
No 34
>3vnx_A Ferritin; 4-helix bundle, iron storage, oxidoreductase; 2.40A {Ulva pertusa}
Probab=91.65 E-value=2.8 Score=34.24 Aligned_cols=114 Identities=11% Similarity=0.077 Sum_probs=79.7
Q ss_pred ChhhHHHHHHHHHhHHHHHHHHHHHHHhhcCC-CCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH------------Hc
Q 041347 28 GLQNRQAIVHSLAHTESWAIDLSWDIIARFGK-QKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL------------AR 94 (189)
Q Consensus 28 s~~~RaalLHaiAHIEl~AIdLA~Dai~RF~~-~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el------------AR 94 (189)
-...-...|....+.|++|+.+.+-...=|.. ..++| .|-.=|.+.|.||-.|...|.+++..+ -.
T Consensus 36 ~~~~v~~~LN~qin~EL~As~~Ylsma~~f~~~d~~l~-g~a~~f~~~s~EE~~HA~kLi~yi~~rGG~~~l~~i~~p~~ 114 (204)
T 3vnx_A 36 YHIECEAAINEQINIEYTISYVYHALHSYFARDNVGLP-GFAKFFKEASDEEREHAHMLMDYQTKRGGRVELKPLAAPEM 114 (204)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCc
Confidence 34567788999999999999999876666642 12454 555556678999999999999999887 11
Q ss_pred cCCCc-----HHH------------------HHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHH
Q 041347 95 GLNVL-----PTA------------------ISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLCL 142 (189)
Q Consensus 95 GLDv~-----P~~------------------i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~ 142 (189)
|.+.. ..+ ++--...+|..+...|+.-++.|++.|++.=...+..++.
T Consensus 115 ~~~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~lA~~~~D~~t~~fLe~~fL~EQve~i~~l~~~l~~l~~ 185 (204)
T 3vnx_A 115 EFANDDKGEALYAMELALSLEKLNFQKLQALQAIADKHKDAALCDFVEGGLLSEQVDAVKEHAVYVSQLRR 185 (204)
T ss_dssp CCCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21100 111 1112357999999999933899999998765555555553
No 35
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=91.52 E-value=0.22 Score=39.96 Aligned_cols=97 Identities=19% Similarity=0.103 Sum_probs=68.8
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH---------------HccCCCcHHHHHH
Q 041347 41 HTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL---------------ARGLNVLPTAISR 105 (189)
Q Consensus 41 HIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el---------------ARGLDv~P~~i~k 105 (189)
--|++|+...+ +..+-....++| +.-.=|.+.|.+|..|...+-++|..+ ----+.-|.+++.
T Consensus 16 agEs~A~~~Y~-~~A~~A~~eG~~-~iA~~F~~~A~~E~~HA~~~~~~L~~i~~t~enL~~a~~gE~~e~~~mY~~~a~~ 93 (170)
T 3pwf_A 16 AGESMAHMRYL-IFAEKAEQEGFP-NIAKLFRAIAYAEFVHAKNHFIALGKLGKTPENLQMGIEGETFEVEEMYPVYNKA 93 (170)
T ss_dssp HHHHHHHHHHH-HHHHHHHHTTCH-HHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHcCHH-HHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45999998653 122222223565 455556689999999999888887544 1124555777888
Q ss_pred HHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHHHc
Q 041347 106 FRNGGDNETAELLERVVYREEITHCAARVRWFRYLCLRS 144 (189)
Q Consensus 106 ~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~~ 144 (189)
-+.-||..++.+++ -|..+|-.|.. ||..+-++-
T Consensus 94 A~eeg~~~~a~~f~-~i~~~E~~H~~----~~~~~l~~l 127 (170)
T 3pwf_A 94 AEFQGEKEAVRTTH-YALEAEKIHAE----LYRKAKEKA 127 (170)
T ss_dssp HHHHTCHHHHHHHH-HHHHHHHHHHH----HHHHHHHHH
T ss_pred HHHCCCHHHHHHHH-HHHHHHHHHHH----HHHHHHHHH
Confidence 89999999999999 58999999974 666665543
No 36
>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A
Probab=89.73 E-value=5.3 Score=34.54 Aligned_cols=60 Identities=8% Similarity=0.016 Sum_probs=42.7
Q ss_pred HHHHHHH--hHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 041347 34 AIVHSLA--HTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELARGLN 97 (189)
Q Consensus 34 alLHaiA--HIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elARGLD 97 (189)
.|+-.+. .=|+.|+-..|--.+.+. + |.-|++=+..++.||-.|..|+.+.+..|..|..
T Consensus 24 ~L~e~~GG~~GElsAamqYl~Q~~~~~---~-~~~y~dLL~dIatEEl~HlEmva~~I~~L~~ga~ 85 (266)
T 1o9i_A 24 RLQESLGGQWGETTGMMSFLSQGWAST---G-AEKYKDLLLDTGTEEMAHVEMISTMIGYLLEDAP 85 (266)
T ss_dssp HHHHHHHSTTSHHHHHHHHHHHHHHCC---S-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHhCCCccHHHHHHHHHHHHhcCC---C-cHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCC
Confidence 3444444 789999998874344442 3 5444555567789999999999999999977653
No 37
>2vxx_A Starvation induced DNA binding protein; stress response protein, DPS, oxidation, iron binding, ferroxidase centre; HET: PG4; 2.40A {Synechococcus elongatus}
Probab=89.11 E-value=3.2 Score=32.74 Aligned_cols=96 Identities=13% Similarity=0.006 Sum_probs=65.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCC-hhHHHhHHHHHHHHHHHHHHHHHHHHHH-----Hc--------cCC
Q 041347 32 RQAIVHSLAHTESWAIDLSWDIIARFGKQKAMP-REFFMDFVKVAQDKGRHFTLLAAQLEEL-----AR--------GLN 97 (189)
Q Consensus 32 RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP-~~Fy~Dwl~VA~DEarHF~LL~~rL~el-----AR--------GLD 97 (189)
-+..|-.+-.-|+.|+...+-..+.+. +.- ..+-.=+-+.+.+|..|+-.+.+|+..| .. .+.
T Consensus 29 vi~~LN~~La~e~~a~~~y~~~hw~v~---g~~f~~lh~~~~~~~~ee~~had~laErI~~LGg~p~~~~~~~~~~s~i~ 105 (192)
T 2vxx_A 29 ICEGMNRLLASFQALYLQYQKHHFVVE---GAEFYPLHQFFQDCYEQVQDHVHALGERLNGLGGVPVAGFQQLAALCCFT 105 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCC---STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc---CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCcCC
Confidence 356667777889999998887777773 222 2233334577899999999999999999 11 121
Q ss_pred -------CcHHHH------------------HHHHcCCCHHHHHHHHHhhhhhhhhhHH
Q 041347 98 -------VLPTAI------------------SRFRNGGDNETAELLERVVYREEITHCA 131 (189)
Q Consensus 98 -------v~P~~i------------------~k~~~~GD~~sa~iLe~iI~~DEI~HVa 131 (189)
....++ +.-...||..+.++|+. |+.||-.|+-
T Consensus 106 e~~~~~~~~~e~l~~~l~~e~~~i~~~~~~i~~a~~~~D~~T~~lL~~-~l~eeEkh~w 163 (192)
T 2vxx_A 106 PEPEGAFNCRQMLSNDLQAEQAIIGVLRQQATQAESLGDRATAYLYDQ-ILLKTEERAY 163 (192)
T ss_dssp CCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHH
Confidence 111222 12235789999999995 8889988863
No 38
>1mty_D Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.25.1.2 PDB: 1mmo_D 1xvb_A 1fyz_A 1fz0_A 1fz2_A 1fz3_A 1fz4_A 1fz5_A 1fz6_A 1fz7_A 1fz8_A 1fz9_A 1fzh_A 1fzi_A 1xmf_A 1xmg_A 1xmh_A 1xu3_A 1xu5_A 1fz1_A ...
Probab=88.85 E-value=5.2 Score=37.44 Aligned_cols=103 Identities=17% Similarity=0.050 Sum_probs=70.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHH------ccCCCc---------
Q 041347 35 IVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELA------RGLNVL--------- 99 (189)
Q Consensus 35 lLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elA------RGLDv~--------- 99 (189)
++=+++|-||.|..-... +.|+. .-..-..--...+.||.||......+.+++. .|.|..
T Consensus 92 ~l~av~~~EY~a~~~~a~-~~r~a----p~~~~rnaaa~qalDElRHaQ~~~~l~k~~~~~~~dp~Gfd~~r~~~~~~p~ 166 (512)
T 1mty_D 92 VSNFLEVGEYNAIAATGM-LWDSA----QAAEQKNGYLAQVLDEIRHTHQCAYVNYYFAKNGQDPAGHNDARRTRTIGPL 166 (512)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHC----CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCTTTTTHHHHGGGSSH
T ss_pred HHcccCHHHHHHHHHHHH-HHHhC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccCCCHHHHHhccCCc
Confidence 344567999999985443 47774 2233334455667899999998665545553 344431
Q ss_pred -----------------------------HH--------HHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHH
Q 041347 100 -----------------------------PT--------AISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLCL 142 (189)
Q Consensus 100 -----------------------------P~--------~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~ 142 (189)
|. +.+--...||..+..++.. |..||-.|.+.|..-+++|++
T Consensus 167 ~q~~R~~fe~~~~t~D~~E~~valn~v~E~~~tnll~~~~~~~Aa~nGD~~tptv~~s-iqsDEaRH~~~g~~ll~~Lle 245 (512)
T 1mty_D 167 WKGMKRVFSDGFISGDAVECSLNLQLVGEACFTNPLIVAVTEWAAANGDEITPTVFLS-IETDELRHMANGYQTVVSIAN 245 (512)
T ss_dssp HHHHHHHHTHHHHSSCHHHHHHHHTTTHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhHHHHHHHhhcCChHHHhhhhhhhHHHHhHHHHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHc
Confidence 10 1222356899999999984 899999999999999999997
Q ss_pred H
Q 041347 143 R 143 (189)
Q Consensus 143 ~ 143 (189)
.
T Consensus 246 d 246 (512)
T 1mty_D 246 D 246 (512)
T ss_dssp S
T ss_pred C
Confidence 3
No 39
>2v8t_A Manganese-containing pseudocatalase; manganese catalase, oxidoreductase; 0.98A {Thermus thermophilus} PDB: 2v8u_A 2cwl_A
Probab=87.35 E-value=7 Score=34.40 Aligned_cols=58 Identities=16% Similarity=0.143 Sum_probs=42.6
Q ss_pred HHHHHH--hHHHHHHHHHHHHHhhcCCCCCCCh---hHHHhHHHHHHHHHHHHHHHHHHHHHHHccC
Q 041347 35 IVHSLA--HTESWAIDLSWDIIARFGKQKAMPR---EFFMDFVKVAQDKGRHFTLLAAQLEELARGL 96 (189)
Q Consensus 35 lLHaiA--HIEl~AIdLA~Dai~RF~~~~~lP~---~Fy~Dwl~VA~DEarHF~LL~~rL~elARGL 96 (189)
|+-.+. .=|+.|+-..| ..+|.- .-|. +|++=+..++.+|-.|..|+..++..|-+|.
T Consensus 26 L~eq~GG~~GElsAamqYl--~Qs~~~--~~~~~~~~~~dLL~dIatEEL~HlEmvat~I~~L~~Ga 88 (302)
T 2v8t_A 26 VQALLGGRFGEMSTLMNYM--YQSFNF--RGKKALKPYYDLIANIATEELGHIELVAATINSLLAKN 88 (302)
T ss_dssp HTHHHHSTTSHHHHHHHHH--HHHHHC--SCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred HHHHhCCCccHHHHHHHHH--HHHccC--CCCcchHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCC
Confidence 444443 77999998887 445531 1243 6777777888999999999999999995554
No 40
>1z6o_M Ferritin heavy chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1
Probab=86.87 E-value=5.6 Score=31.81 Aligned_cols=65 Identities=18% Similarity=0.076 Sum_probs=50.6
Q ss_pred CChhhHHHHHHHHHhHHHHHHHHHHHHHhhcCCC-CCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 041347 27 NGLQNRQAIVHSLAHTESWAIDLSWDIIARFGKQ-KAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 27 ~s~~~RaalLHaiAHIEl~AIdLA~Dai~RF~~~-~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el 92 (189)
+-...-+..|....+.|+.|+...+-...=|... .++| .|-.=+.+.|.||-.|...|.+++..+
T Consensus 16 ~~~~~~~~~LN~qin~El~As~~Yl~ma~~f~~~~~~l~-g~a~~f~~~s~EE~~HA~kli~yi~~r 81 (191)
T 1z6o_M 16 TMHRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRP-GFAQLFFDAASEEREHAMKLIEYLLMR 81 (191)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcccCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4445677899999999999999988666666521 3455 566656678999999999999999875
No 41
>2itb_A TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative ATTH, structural genomics, joint center for structu genomics, JCSG; 2.05A {Pseudomonas putida} SCOP: a.25.1.7
Probab=82.56 E-value=7.3 Score=32.74 Aligned_cols=66 Identities=14% Similarity=0.257 Sum_probs=53.4
Q ss_pred ChhhHHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCCc
Q 041347 28 GLQNRQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELARGLNVL 99 (189)
Q Consensus 28 s~~~RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elARGLDv~ 99 (189)
-.++-..+|-.=||-|.-|--.|+-.+.||+. -.+...-.+..|.||-.||.++.+.|.+ ||+...
T Consensus 24 A~~nl~~iL~DHA~CE~KAA~tAm~Li~rYp~----~~~Lv~~m~~LarEEL~HFeqVl~im~~--Rgi~l~ 89 (206)
T 2itb_A 24 ALADQETLLIDHKNCEFKAASTALSLIAKYNT----HLDLINMMSRLAREELVHHEQVLRLMKR--RGVPLR 89 (206)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHHHHHHTTT----CHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----cHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCCC
Confidence 34567778888899999888888778899973 4577888899999999999999999985 666443
No 42
>1ji5_A DLP-1; dodecamer, four-helix bundle, metal transport; 2.50A {Bacillus anthracis} SCOP: a.25.1.1
Probab=82.19 E-value=3.7 Score=30.08 Aligned_cols=26 Identities=12% Similarity=0.298 Sum_probs=20.7
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHH
Q 041347 67 FFMDFVKVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 67 Fy~Dwl~VA~DEarHF~LL~~rL~el 92 (189)
+-.=+-+.+.+|..|...+.+|+..+
T Consensus 35 l~~~~~~~~~ee~~had~laeri~~l 60 (142)
T 1ji5_A 35 LHEKFEELYTESATHIDEIAERILAI 60 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 34444567888899999999999988
No 43
>3u52_A Phenol hydroxylase component PHN; 4-helix bundle, dioxygen, hydrocarbons, oxidore; HET: MPO EPE; 1.95A {Pseudomonas stutzeri} PDB: 2inn_A 2inp_A
Probab=81.80 E-value=25 Score=32.82 Aligned_cols=104 Identities=14% Similarity=0.106 Sum_probs=73.7
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHH---ccC--------------
Q 041347 34 AIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELA---RGL-------------- 96 (189)
Q Consensus 34 alLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elA---RGL-------------- 96 (189)
..+=.+.|.|+.|. .+.-.+.||. .-.....--+=-+.||-||..++...+..|+ .|+
T Consensus 99 ~~l~al~~~EYgA~-~~~a~~~r~~----~g~~~~na~~fqa~DeLRhAQ~~~~~~~~l~~~~~Gf~d~a~~~d~~W~~~ 173 (511)
T 3u52_A 99 LFISGISPLEHAAF-QGYSKVGRQF----SGAGARVACQMQAIDELRHSQTQQHAMSHYNKHFNGLHDGPHMHDRVWYLS 173 (511)
T ss_dssp HHHHHTHHHHHHHH-HHHHHHHHHC----SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCTTHHHHHTTCGGGH
T ss_pred HHhccccHHHHHHH-HHHHHHHHhc----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccChhhhhcCccccch
Confidence 34457789999995 4444688995 4455566667788999999998887666661 233
Q ss_pred ------------C---------------CcHH----HHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHHH
Q 041347 97 ------------N---------------VLPT----AISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLCLR 143 (189)
Q Consensus 97 ------------D---------------v~P~----~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~ 143 (189)
| +++. +.+--...||..+..++.. +..||-.|.+.|.-=|+++.++
T Consensus 174 ~~R~~vEd~~t~Dw~E~~vA~nlv~E~l~tnLl~~~~~~~Aa~nGD~~t~t~~~s-~qsDesRh~~w~~alvk~~l~~ 250 (511)
T 3u52_A 174 VPKSFFDDARSAGPFEFLTAISFSFEYVLTNLLFVPFMSGAAYNGDMATVTFGFS-AQSDEARHMTLGLEVIKFILEQ 250 (511)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHTTCCCCCCHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHhhccccCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHCCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhc
Confidence 1 1111 1223345689888888874 7899999999999999998876
No 44
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=81.57 E-value=4.6 Score=30.23 Aligned_cols=51 Identities=18% Similarity=0.165 Sum_probs=37.8
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHH
Q 041347 35 IVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEE 91 (189)
Q Consensus 35 lLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~e 91 (189)
++-+|. =|+-|||+.-..+.... -.+-..=|..++.||-.|+.|+.+.|..
T Consensus 23 ai~sl~-~EleAI~~Y~q~a~~~~-----d~~~k~vl~~i~~EEkeH~g~~lelLrr 73 (95)
T 3k6c_A 23 AIISLR-EELEAVDLYNQRVNACK-----DKELKAILAHNRDEEKEHAAMLLEWIRR 73 (95)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344666 59999999765444442 2345555778999999999999999987
No 45
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=79.82 E-value=2.2 Score=31.93 Aligned_cols=47 Identities=23% Similarity=0.292 Sum_probs=38.9
Q ss_pred HccCCCcHHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHH
Q 041347 93 ARGLNVLPTAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYL 140 (189)
Q Consensus 93 ARGLDv~P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~l 140 (189)
..-|++---+-++.....|....+||.. |-.||+.||+--..|++.+
T Consensus 28 ~~EleAI~~Y~q~a~~~~d~~~k~vl~~-i~~EEkeH~g~~lelLrr~ 74 (95)
T 3k6c_A 28 REELEAVDLYNQRVNACKDKELKAILAH-NRDEEKEHAAMLLEWIRRC 74 (95)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 3345555567777888999999999995 8999999999999999874
No 46
>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A
Probab=79.66 E-value=6.2 Score=35.28 Aligned_cols=74 Identities=18% Similarity=0.260 Sum_probs=51.8
Q ss_pred HhHHH-HHHHHHHHHHHHHHHHHH----------------HHccCCCcH----H------------------HHHHH-Hc
Q 041347 69 MDFVK-VAQDKGRHFTLLAAQLEE----------------LARGLNVLP----T------------------AISRF-RN 108 (189)
Q Consensus 69 ~Dwl~-VA~DEarHF~LL~~rL~e----------------lARGLDv~P----~------------------~i~k~-~~ 108 (189)
..|+. =..||.||-.+|++.|.- +..|.|..+ - -+.|+ +.
T Consensus 108 ~~w~~~WtaEEnrHg~aL~~YL~lsgrvDp~~lE~~~~~~i~~Gfd~~~~~~p~~~~vy~sfQE~AT~vsh~n~~r~A~~ 187 (338)
T 2uw1_A 108 AMWTRAWTAEENRHGDLLNKYLYLSGRVDMRKIEKTIQYLIGSGMDIKSENSPYLGFIYTSFQERATFISHANTAKLAQH 187 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHCCCCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33443 378999999999998882 268887643 1 02233 34
Q ss_pred CCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHHH
Q 041347 109 GGDNETAELLERVVYREEITHCAARVRWFRYLCLR 143 (189)
Q Consensus 109 ~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~ 143 (189)
.||..-++|+. +|-.||..|-.+=.+-++.+-+.
T Consensus 188 ~gdPvLa~i~~-~IA~DE~RH~~~Y~~~v~~~le~ 221 (338)
T 2uw1_A 188 YGDKKLAHICG-SIASDEKRHATAYTKIVEKLAEI 221 (338)
T ss_dssp TTCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhh
Confidence 78999999999 69999999998755555544433
No 47
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=79.63 E-value=2.3 Score=31.84 Aligned_cols=44 Identities=25% Similarity=0.320 Sum_probs=37.8
Q ss_pred CCCcHHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHH
Q 041347 96 LNVLPTAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYL 140 (189)
Q Consensus 96 LDv~P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~l 140 (189)
|++--.+.+......|.+..+||.. |-+||..||+--.+|++.+
T Consensus 31 leAI~~Y~q~A~~t~D~evk~vl~~-iadEEkeH~g~~l~~Lrr~ 74 (95)
T 1zpy_A 31 LEAVDLYNQRVNACKDKELKAILAH-NRDEEKEHAAMLLEWIRRC 74 (95)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 4444567788888999999999995 8999999999999999987
No 48
>3ge3_A Toluene-4-monooxygenase system protein A; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} SCOP: a.25.1.2 PDB: 3ge8_A 3dhi_A* 3dhh_A* 3dhg_A* 3i5j_A 3i63_A 3q14_A 3q2a_A* 3q3m_A* 3q3n_A* 3q3o_A* 3rmk_A* 3ri7_A
Probab=79.50 E-value=13 Score=34.76 Aligned_cols=105 Identities=17% Similarity=0.035 Sum_probs=73.0
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH--------------------
Q 041347 33 QAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL-------------------- 92 (189)
Q Consensus 33 aalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el-------------------- 92 (189)
...+=++.|.|+.|. .+.-.+.|+. .-..-..--.=-+.||.||.....-++.++
T Consensus 94 k~~~~av~~~Ey~a~-~g~A~~~R~a----ps~~~rn~~~fQ~~DElRHaQ~q~y~~~~l~~~~~gFd~~~r~~~d~~W~ 168 (500)
T 3ge3_A 94 KSHYGAIAVGEYAAV-TGEGRMARFS----KAPGNRNMATFGMMDELRHGQLQLFFPHEYCKKDRQFDWAWRAYHSNEWA 168 (500)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHHC----SCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGGHHHHGGGSCCHH
T ss_pred HHHhcccchHHHHHH-HHHHHHHHhC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcccChHHHHHhCchhh
Confidence 445567899999996 3333577884 222233333336789999999887666555
Q ss_pred ----------------------HccCCCcH--------HHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHH
Q 041347 93 ----------------------ARGLNVLP--------TAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLCL 142 (189)
Q Consensus 93 ----------------------ARGLDv~P--------~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~ 142 (189)
|-+|=+-| .+.+--..+||..+..++. -|..||-.|.+.|.-=++++.+
T Consensus 169 ~~~~R~~fE~~~~t~Dw~E~~valnlvfEp~~tnll~v~l~~~Aa~NGD~~tptl~~-S~qsDe~Rh~~~g~alv~~lle 247 (500)
T 3ge3_A 169 AIAAKHFFDDIITGRDAISVAIMLTFSFETGFANMQFLGLAADAAEAGDYTFANLIS-SIQTDESRHAQQGGPALQLLIE 247 (500)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHTCCCCCCCCHHHHHTHHHHHHHHTTCHHHHHHHH-HHHHHHHHHGGGHHHHHHHHHH
T ss_pred hhHHHHHHHHHHccCCHHHHHHHHHhhHHHhhhHHHHHHHHHHHHHcCChhhHHHHH-HHHHhHHHHHHHHHHHHHHHHh
Confidence 33332211 1345556789999999998 4899999999999999999886
Q ss_pred H
Q 041347 143 R 143 (189)
Q Consensus 143 ~ 143 (189)
+
T Consensus 248 ~ 248 (500)
T 3ge3_A 248 N 248 (500)
T ss_dssp T
T ss_pred c
Confidence 5
No 49
>3hl1_A Ferritin like protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Caulobacter vibrioides}
Probab=79.35 E-value=11 Score=33.50 Aligned_cols=63 Identities=10% Similarity=0.030 Sum_probs=54.2
Q ss_pred CChhhHHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 041347 27 NGLQNRQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 27 ~s~~~RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el 92 (189)
-+.+.-..+|+.-+-+|++.|=..+=+.|.-. +-..+-+.=...|+.||-.|+.|..+.|..+
T Consensus 6 ~~~~~L~~~Lq~Ai~lE~stIp~YL~a~ySi~---~~n~~~~~~i~~V~~eEMlHl~l~aNll~Ai 68 (317)
T 3hl1_A 6 WTLPRLYQHFQGAIDLELWTIPYYLTVLYSIK---DPTTVPYRLIQAAVYQEMLHAQLVSNIANAY 68 (317)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHBS---CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 45667778899999999999998887888775 3456788888999999999999999999999
No 50
>3pf7_A Benzoyl-COA oxygenase component B; DIIRON center, epoxidase, benzoyl coenzyme A, oxidoreductase; 1.90A {Azoarcus evansii} PDB: 3per_A 3pm5_A* 3q1g_A
Probab=79.04 E-value=31 Score=32.32 Aligned_cols=110 Identities=15% Similarity=0.128 Sum_probs=65.8
Q ss_pred CChhhHHHHHHH---HHhHHHHHHHHHHHHHhhcCCCCCCChhHH-HhHHHHHHHHHHHHHHHHHHHHHH----------
Q 041347 27 NGLQNRQAIVHS---LAHTESWAIDLSWDIIARFGKQKAMPREFF-MDFVKVAQDKGRHFTLLAAQLEEL---------- 92 (189)
Q Consensus 27 ~s~~~RaalLHa---iAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy-~Dwl~VA~DEarHF~LL~~rL~el---------- 92 (189)
...+=|..|+.- .||-|+..+.---+.+. ..|.-+- .-.+++..||++|...+...|.+.
T Consensus 101 mP~eYR~~LiRlI~~haDSEiagve~e~~wi~------~APSL~~k~~L~aiVqDE~gHg~~mlyllae~fG~Dr~e~ad 174 (481)
T 3pf7_A 101 VPGEYRSTLRRIIVTQGDTEPASVEQQRHLGL------TAPSLYDLRNLFQVNVEEGRHLWAMVYLLHAHFGRDGREEGE 174 (481)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHHHHHHTTGGG------GCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhhHHhhchhhhhHHh------cCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHHH
Confidence 355566665554 46889888765222121 3454333 368899999999997666666332
Q ss_pred ---Hc---------cCCCc---------------------HHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHH
Q 041347 93 ---AR---------GLNVL---------------------PTAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRY 139 (189)
Q Consensus 93 ---AR---------GLDv~---------------------P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~ 139 (189)
+| =|.+. -..+.-|....=.--+..+.+ |+.||.-|+..|-.|+..
T Consensus 175 ~LL~R~sGd~~~pk~L~~FNyPt~~WaD~~~f~~LvDrAgi~qL~~L~~sSY~PlARamr~-I~kEEafH~~~Ge~gl~r 253 (481)
T 3pf7_A 175 ALLERRSGDEDNPRILTAFNEKTPDWLSFFMFTFITDRDGKFQLASLAESAFDPLARTCKF-MLTEEAHHLFVGESGIAR 253 (481)
T ss_dssp HHHHCCTTCSSSCCSSGGGSSCCCSHHHHHHHHHHTHHHHHHHHHHHTTCSBHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHhhccCCcccccccccccCCCCCHHHHHHHHHhhhHHHHHHHHHHHhCCcHHHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 11 11110 001112222222233667874 899999999999999999
Q ss_pred HHHH
Q 041347 140 LCLR 143 (189)
Q Consensus 140 lC~~ 143 (189)
++++
T Consensus 254 li~~ 257 (481)
T 3pf7_A 254 VIQR 257 (481)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9763
No 51
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=77.59 E-value=27 Score=28.32 Aligned_cols=105 Identities=14% Similarity=0.128 Sum_probs=70.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHHcc----------C-----
Q 041347 32 RQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELARG----------L----- 96 (189)
Q Consensus 32 RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elARG----------L----- 96 (189)
-...|-.-..-|++|.+...-. .+-....+.+ +.-.=|-.+|.+|..|-.++.++|..+.-+ +
T Consensus 29 T~~nL~~a~~gE~~a~~~Y~~~-A~~A~~eG~~-~iA~~F~~~A~~E~~HA~~~~~~l~~l~~~~~i~~~p~~~~gst~e 106 (202)
T 1yuz_A 29 TLENLKAAIAGETGAHAKYTAF-AKAAREQGYE-QIARLFEATAAAELIHIGLEYALVAEMEPGYEKPTVAAPSAYSCDL 106 (202)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHHHHTTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCC--CCCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCcH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCccCCCCHHH
Confidence 3445666677899999874322 2221112343 244445578999999999999999976221 1
Q ss_pred --------------CCcHHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHHH
Q 041347 97 --------------NVLPTAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLCLR 143 (189)
Q Consensus 97 --------------Dv~P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~ 143 (189)
+.=|.+++.-+..||..++..|+ -|..+|..|-. ||+.+-++
T Consensus 107 nL~~a~~gE~~E~t~my~~~a~~A~eEgd~~~a~~f~-~i~~~E~~H~~----~~~~ll~~ 162 (202)
T 1yuz_A 107 NLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHVFT-RAKLAESVHAE----RYLAAYND 162 (202)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHH-HHHHHHHHHHH----HHHHHHHT
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHCCCHHHHHHHH-HHHHHHHHHHH----HHHHHHHH
Confidence 22355666677889999999999 58999999964 56555543
No 52
>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A
Probab=77.24 E-value=9.5 Score=29.36 Aligned_cols=74 Identities=19% Similarity=0.279 Sum_probs=50.6
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhcCCCCCCCh-hHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHcCCCHH
Q 041347 35 IVHSLAHTESWAIDLSWDIIARFGKQKAMPR-EFFMDFVKVAQDKGRHFTLLAAQLEELARGLNVLPTAISRFRNGGDNE 113 (189)
Q Consensus 35 lLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~-~Fy~Dwl~VA~DEarHF~LL~~rL~elARGLDv~P~~i~k~~~~GD~~ 113 (189)
+|-++--=|++||.+.- -+... .|. +...-.+.+..||.+|+.++...+. -| .-..
T Consensus 36 lIr~~ikaE~~AI~~Y~-qLA~~-----AP~ee~k~iI~eIr~DE~rH~~~F~~lY~---TG--------------~p~s 92 (115)
T 2hz8_A 36 LIQEIVKAEKQAVKVYK-EAAEK-----ARNPEKRQVIDKILEDEEKHIEWLKAASK---QG--------------NAEQ 92 (115)
T ss_dssp THHHHHHHHHHHHHHHH-HHHHS-----CCCTTTTTTHHHHHHHHHHHHHHHHHHHH---SS--------------CCTT
T ss_pred HHHHHHHHHHHHHHHHH-HHHhc-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--------------ChHh
Confidence 34444444999998852 23344 343 4566788999999999999998887 34 1123
Q ss_pred HHHHHHHhhhhhhhhhHHh
Q 041347 114 TAELLERVVYREEITHCAA 132 (189)
Q Consensus 114 sa~iLe~iI~~DEI~HVa~ 132 (189)
..+=|++ .+.+|..+|.+
T Consensus 93 Y~eGL~~-A~~~Eqeave~ 110 (115)
T 2hz8_A 93 FASLVQQ-ILQDEQRHVEE 110 (115)
T ss_dssp HHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHHHHH
Confidence 4556663 79999999864
No 53
>1jig_A DLP-2; dodecamer, four-helix bundle, metal transport; 1.46A {Bacillus anthracis} SCOP: a.25.1.1
Probab=75.71 E-value=6.9 Score=28.91 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=20.4
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHH
Q 041347 68 FMDFVKVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 68 y~Dwl~VA~DEarHF~LL~~rL~el 92 (189)
-.=+-+.+.+|..|+-.+.+|+..+
T Consensus 40 h~~~~~~~~ee~~had~laeri~~l 64 (146)
T 1jig_A 40 HEKFEEFYNEAGTYIDELAERILAL 64 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 3334467888889999999999999
No 54
>1z6o_A Ferritin light chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1
Probab=74.01 E-value=32 Score=28.00 Aligned_cols=76 Identities=14% Similarity=0.014 Sum_probs=55.8
Q ss_pred CCCCCCCCCCC--CChhhHHHHHHHHHhHHHHHHHHHHHHHhhcCC-CCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 041347 16 LPVSCRPARLG--NGLQNRQAIVHSLAHTESWAIDLSWDIIARFGK-QKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 16 ~~~P~rP~R~~--~s~~~RaalLHaiAHIEl~AIdLA~Dai~RF~~-~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el 92 (189)
..+|.-+++.. +....-...|....+.||.|+.+.+-+..=|.. ..++| .|-.=|.+.+.||-.|...|.+++...
T Consensus 19 ~~~~~c~~~~~~~~~~~~v~~~LN~qin~El~As~~Yl~ma~~f~~dd~~l~-gfa~~f~~~s~EE~~HA~kli~yi~~r 97 (212)
T 1z6o_A 19 LALPRCNAVYGEYGSHGNVATELQAYAKLHLERSYDYLLSAAYFNNYQTNRA-GFSKLFKKLSDEAWSKTIDIIKHVTKR 97 (212)
T ss_dssp CCCTTCSSCCTTTTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchH-HHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 34555566655 344457789999999999999999866666642 23455 455555678999999999999999874
No 55
>1n1q_A DPS protein; four-helix bundle, unknown function; 2.20A {Brevibacillus brevis} SCOP: a.25.1.1
Probab=74.00 E-value=8 Score=28.73 Aligned_cols=25 Identities=16% Similarity=0.290 Sum_probs=20.3
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHH
Q 041347 68 FMDFVKVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 68 y~Dwl~VA~DEarHF~LL~~rL~el 92 (189)
-.=+-+.+.+|..|+-.+.+|+..+
T Consensus 43 h~~~~~~~~ee~~had~laeri~~l 67 (149)
T 1n1q_A 43 HEKFEELYTEASGHIDTLAERVLSI 67 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 3344467888889999999999999
No 56
>2c41_A DPS family DNA-binding stress response protein; iron-binding/oxidation protein, DPS (DNA-binding proteins from starved cells); HET: PG4 PGE; 1.81A {Thermosynechococcus elongatus}
Probab=73.51 E-value=26 Score=26.27 Aligned_cols=95 Identities=15% Similarity=-0.023 Sum_probs=61.7
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCCh-hHHHhHHHHHHHHHHHHHHHHHHHHHH-----Hc-----------
Q 041347 32 RQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPR-EFFMDFVKVAQDKGRHFTLLAAQLEEL-----AR----------- 94 (189)
Q Consensus 32 RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~-~Fy~Dwl~VA~DEarHF~LL~~rL~el-----AR----------- 94 (189)
-+.+|-..-.-|+.++...+-.-+=+. +.-. .+-.=+-+.+.+|..|+-.+.+|+..+ +.
T Consensus 11 v~~~LN~~La~e~~~~~~y~~~hw~v~---g~~f~~lh~~~~~~~~ee~~had~iaErI~~lGg~p~~~~~~~~~~s~i~ 87 (158)
T 2c41_A 11 VLTTLKREQANAVVMYLNYKKYHWLTY---GPLFRDLHLLFEEQGSEVFAMIDELAERSLMLDGQPVADPADYLKVATVT 87 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCC---STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSGGGHHHHCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhheE---CcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCC
Confidence 355666666778999988776555553 2222 233334467888899999999999999 00
Q ss_pred ----cCCCcH-----------------HHHHHHHcCCCHHHHHHHHHhhhhhhhhhH
Q 041347 95 ----GLNVLP-----------------TAISRFRNGGDNETAELLERVVYREEITHC 130 (189)
Q Consensus 95 ----GLDv~P-----------------~~i~k~~~~GD~~sa~iLe~iI~~DEI~HV 130 (189)
+.|+.. ..++.-...||..|.++|+. |+.+|-.|+
T Consensus 88 ~~~~~~~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~ll~~-~l~~~Ek~~ 143 (158)
T 2c41_A 88 PSSGQLTVKQMIEEAIANHELIITEMHQDAEIATEAGDIGTADLYTR-LVQTHQKHR 143 (158)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH-HHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHH
Confidence 222111 11222345789999999985 788887886
No 57
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=73.45 E-value=27 Score=26.42 Aligned_cols=95 Identities=18% Similarity=0.103 Sum_probs=61.0
Q ss_pred HHhHHHHHHHHHHHHHhhcCCCCCC-ChhHHHhHHHHHHHHHHHHHHHHHHHHHH--H--ccCCC---------------
Q 041347 39 LAHTESWAIDLSWDIIARFGKQKAM-PREFFMDFVKVAQDKGRHFTLLAAQLEEL--A--RGLNV--------------- 98 (189)
Q Consensus 39 iAHIEl~AIdLA~Dai~RF~~~~~l-P~~Fy~Dwl~VA~DEarHF~LL~~rL~el--A--RGLDv--------------- 98 (189)
.-.+|..|++......-.+. .. -.....=|.+.|.+|.+|...|.++.... . +..++
T Consensus 13 Ai~~E~~~~~~Y~~lA~~~~---~~~~~~~k~~f~~LA~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (167)
T 2oh3_A 13 AIALETEAAERYVELADMME---AHNNLDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSWQYRWKTPPEVGDENDIH 89 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCGGGTSCCCCCCSSCC---C
T ss_pred HHHHHHHHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccCCCcHhhhhHhhcc
Confidence 34689999987665544221 11 12455556789999999999999997662 1 11221
Q ss_pred ---cH----------------HHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHH
Q 041347 99 ---LP----------------TAISRFRNGGDNETAELLERVVYREEITHCAARVRWF 137 (189)
Q Consensus 99 ---~P----------------~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF 137 (189)
++ .+.+-.....|..+.++++. |..||.+|+..=..++
T Consensus 90 ~~~~~~~~l~~A~~~E~~a~~fY~~~a~~~~d~~~k~~~~~-la~eE~~H~~~l~~~~ 146 (167)
T 2oh3_A 90 YLMTPYHALRYARDNEIRGMEYYKEAAANSADPEVKRLGAD-FAAEEAEHVVALDKWI 146 (167)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 01 11223345788888999995 8999999987544443
No 58
>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1uzr_A*
Probab=71.24 E-value=11 Score=32.18 Aligned_cols=110 Identities=11% Similarity=0.027 Sum_probs=67.3
Q ss_pred ChhhHHHHHHHHHhHHHHHHHH--HHHHHhhcCCCCCCC--hhHHHhHHHHHHHHHHHHHHHHHHHHHHHcc--------
Q 041347 28 GLQNRQAIVHSLAHTESWAIDL--SWDIIARFGKQKAMP--REFFMDFVKVAQDKGRHFTLLAAQLEELARG-------- 95 (189)
Q Consensus 28 s~~~RaalLHaiAHIEl~AIdL--A~Dai~RF~~~~~lP--~~Fy~Dwl~VA~DEarHF~LL~~rL~elARG-------- 95 (189)
++..|..+.|.++=. .+.|- +-..+-+|...-..| +.||. ..+..|+.|-..++.-|..+...
T Consensus 58 s~~Er~~~~~~l~~~--~~~D~iq~~~~~~~~~~~~~~pe~~~~~~---~q~~~E~iHs~sYs~il~tl~~~~e~~~~f~ 132 (296)
T 3mjo_A 58 TPQEQLATMRVFTGL--TLLDTIQGTVGAISLLPDAETMHEEAVYT---NIAFMESVHAKSYSNIFMTLASTPQINEAFR 132 (296)
T ss_dssp CHHHHHHHHHHHHHH--HHHHHHHHHTHHHHHGGGCSSHHHHHHHH---HHHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH--HHHHHHHHHhhHHHHHHhcCCHHHHHHHH---HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 777788888887732 12221 101122332111234 34454 44899999999999988877211
Q ss_pred -CCCcHHHHHH-------------------------------------HHcCCCH-HHHHHHHHhhhhhhhhhHHhhhHH
Q 041347 96 -LNVLPTAISR-------------------------------------FRNGGDN-ETAELLERVVYREEITHCAARVRW 136 (189)
Q Consensus 96 -LDv~P~~i~k-------------------------------------~~~~GD~-~sa~iLe~iI~~DEI~HVa~G~rW 136 (189)
.+-+|.+.+| |...|-. .++++++ .|.+||--|+.+|...
T Consensus 133 ~i~~~p~l~~K~~~i~~~~~~~~~~~~~va~~~lEGi~FysgF~~~~~l~~~g~m~g~~~~i~-~I~RDE~lH~~f~~~l 211 (296)
T 3mjo_A 133 WSEENENLQRKAKIIMSYYNGDDPLKKKVASTLLESFLFYSGFYLPMYLSSRAKLTNTADIIR-LIIRDESVHGYYIGYK 211 (296)
T ss_dssp HHHHCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHTHHHHHTHHHHHHHHTTSSHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHH-HHHHHHHHHHHHHHHH
Confidence 1234444444 2333432 4567888 6999999999999999
Q ss_pred HHHHHHH
Q 041347 137 FRYLCLR 143 (189)
Q Consensus 137 F~~lC~~ 143 (189)
|+.+.++
T Consensus 212 ~~~l~~~ 218 (296)
T 3mjo_A 212 YQQGVKK 218 (296)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 9998764
No 59
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=70.99 E-value=23 Score=26.33 Aligned_cols=52 Identities=17% Similarity=0.152 Sum_probs=38.2
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 041347 35 IVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 35 lLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el 92 (189)
.+-+|+ =|+-|||+.-..+-.-. -.+-..=+..+|.||..|+.|+.+-|..+
T Consensus 23 ai~aL~-~EleAI~~Y~q~A~~t~-----D~evk~vl~~iadEEkeH~g~~l~~Lrr~ 74 (95)
T 1zpy_A 23 AIISLR-EELEAVDLYNQRVNACK-----DKELKAILAHNRDEEKEHAAMLLEWIRRC 74 (95)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHH-HHHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444776 79999999765444332 23455556779999999999999999874
No 60
>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2
Probab=70.88 E-value=13 Score=32.13 Aligned_cols=69 Identities=13% Similarity=0.047 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHHH----------------HccCCC---cHH----------------HHHHHHcCCCHHHHHHHH
Q 041347 75 AQDKGRHFTLLAAQLEEL----------------ARGLNV---LPT----------------AISRFRNGGDNETAELLE 119 (189)
Q Consensus 75 A~DEarHF~LL~~rL~el----------------ARGLDv---~P~----------------~i~k~~~~GD~~sa~iLe 119 (189)
..||.||-..|++.|.-- ..|-|. +|- +..--+..||..-++|+.
T Consensus 104 taEE~rHg~aL~~YL~~sg~vdp~~lE~~~~~~i~~g~~~~~~~p~~~~vy~~fqE~aT~v~y~n~a~~~~dPvL~~i~~ 183 (275)
T 1za0_A 104 TAEEHLHAIALREYLVVTREVDPVANEDVRVQHVMKGYRAEKYTQVETLVYMAFYERCGAVFCRNLAAQIEEPILAGLID 183 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCTTTTTCTTC----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Confidence 689999999999999732 344432 222 111224578998899999
Q ss_pred HhhhhhhhhhHHhhhHHHHHHHHHc
Q 041347 120 RVVYREEITHCAARVRWFRYLCLRS 144 (189)
Q Consensus 120 ~iI~~DEI~HVa~G~rWF~~lC~~~ 144 (189)
.|-.||..|..+=.+-++.+.+..
T Consensus 184 -~IA~DE~RH~~~y~~~v~~~le~d 207 (275)
T 1za0_A 184 -RIARDEVRHEEFFANLVTHCLDYT 207 (275)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 699999999988666666665543
No 61
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=70.49 E-value=18 Score=27.26 Aligned_cols=56 Identities=13% Similarity=0.102 Sum_probs=39.7
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 041347 32 RQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 32 RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el 92 (189)
-..+|-..-..|..||+..-.++-+++ + .+-..=+..+|.||..|..+|.+.|.+.
T Consensus 101 ~~~~l~~ai~~E~~a~~~Y~~~a~~~~---d--~~~k~l~~~la~eE~~H~~~l~~~~~~~ 156 (157)
T 1vjx_A 101 LKEVLDIAISVEKDSIILYYELKDGLV---N--SDAQKTVKKIIDQEKEHLRKLLEMKRES 156 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCC---S--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC---C--HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 344455555789999999887776664 1 1222225569999999999999988763
No 62
>1o9r_A Agrobacterium tumefaciens DPS; iron-binding protein, DNA protection from oxidative damage, DNA-binding, iron- binding protein; 1.45A {Agrobacterium tumefaciens} SCOP: a.25.1.1 PDB: 3ge4_A*
Probab=70.04 E-value=7.5 Score=29.87 Aligned_cols=58 Identities=14% Similarity=0.205 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--------------------ccC-CCcHHHH------------------HHHHcCCC
Q 041347 71 FVKVAQDKGRHFTLLAAQLEELA--------------------RGL-NVLPTAI------------------SRFRNGGD 111 (189)
Q Consensus 71 wl~VA~DEarHF~LL~~rL~elA--------------------RGL-Dv~P~~i------------------~k~~~~GD 111 (189)
+-+.+.+|..|+-.+.+|+..|+ -|- | .+.++ +.-...||
T Consensus 55 ~ee~~~e~~~~aD~lAERI~~LGg~P~~~~~~~~~~s~i~e~~~~~~~-~~eml~~~l~~~~~~i~~~r~~i~~a~~~~D 133 (162)
T 1o9r_A 55 LDTFRTQLDNHGDTIAERVVQLGGTALGSLQAVSSTTKLKAYPTDIYK-IHDHLDALIERYGEVANMIRKAIDDSDEAGD 133 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCSSCCB-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 44677888999999999999991 111 2 12222 22346778
Q ss_pred HHHHHHHHHhhhhhhhhhH
Q 041347 112 NETAELLERVVYREEITHC 130 (189)
Q Consensus 112 ~~sa~iLe~iI~~DEI~HV 130 (189)
..|+++|.. |+.++-.|+
T Consensus 134 ~~T~dll~~-il~~~Ek~~ 151 (162)
T 1o9r_A 134 PTTADIFTA-ASRDLDKSL 151 (162)
T ss_dssp HHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHH
Confidence 888888885 677777775
No 63
>2fjc_A Antigen TPF1; mini ferritin, iron binding protein, metal transport; 2.50A {Treponema pallidum} SCOP: a.25.1.1
Probab=67.33 E-value=9.3 Score=29.21 Aligned_cols=22 Identities=18% Similarity=0.200 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 041347 71 FVKVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 71 wl~VA~DEarHF~LL~~rL~el 92 (189)
+-+.+.+|..|+-.+.+|+..|
T Consensus 51 ~ee~~~e~~~~aD~lAERI~~L 72 (156)
T 2fjc_A 51 LEEYYVSVTEAFDTIAERLLQL 72 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 3467788889999999999999
No 64
>2chp_A MRGA, metalloregulation DNA-binding stress protein; DNA-binding protein, DPS, dodecameric, ferritin; 2.0A {Bacillus subtilis}
Probab=66.90 E-value=9.6 Score=29.03 Aligned_cols=58 Identities=17% Similarity=0.219 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--------------------HccCCCcHHH------------------HHHHHcCCCH
Q 041347 71 FVKVAQDKGRHFTLLAAQLEEL--------------------ARGLNVLPTA------------------ISRFRNGGDN 112 (189)
Q Consensus 71 wl~VA~DEarHF~LL~~rL~el--------------------ARGLDv~P~~------------------i~k~~~~GD~ 112 (189)
+-+.+.+|..|+-.+.+|+..| ..|-|+ +.+ ++.-...||.
T Consensus 50 ~ee~~~e~~~~~D~lAERI~~LGg~P~~~~~~~~~~s~i~e~~~~~~~-~eml~~~l~~~~~~i~~~r~~i~~a~~~~D~ 128 (153)
T 2chp_A 50 FEELYDHAAETVDTIAERLLAIGGQPVATVKEYTEHASITDGGNETSA-SEMVQALVNDYKQISSESKFVIGLAEENQDN 128 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSCSCCCCCSH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCH
Confidence 3456778889999999999998 112221 122 2223456888
Q ss_pred HHHHHHHHhhhhhhhhhH
Q 041347 113 ETAELLERVVYREEITHC 130 (189)
Q Consensus 113 ~sa~iLe~iI~~DEI~HV 130 (189)
.|+++|.. |+.++-.|+
T Consensus 129 ~T~dll~~-il~~~Ek~~ 145 (153)
T 2chp_A 129 ATADLFVG-LIEEVEKQV 145 (153)
T ss_dssp HHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHH-HHHHHHHHH
Confidence 88888885 677777775
No 65
>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}
Probab=66.67 E-value=6.9 Score=30.21 Aligned_cols=93 Identities=19% Similarity=0.147 Sum_probs=60.5
Q ss_pred HHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHH---cc-----------------
Q 041347 36 VHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELA---RG----------------- 95 (189)
Q Consensus 36 LHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elA---RG----------------- 95 (189)
|-.--.-|++|+...+ +..+-....+.|. .-.=|.++|.+|..|-..+-++|..+. -|
T Consensus 17 L~~afagEs~A~~~Y~-~~A~~A~~eG~~~-iA~~F~~~A~~E~~HA~~~~~~L~~~~~p~~~~~~~~T~enL~~A~~GE 94 (144)
T 4di0_A 17 LKYAFAGESQANRRYL-YFASKADVEGQND-IAALFRSTAEGETGHAHGHLEYLEAVGDPATGLPFGTSRQNLQSAIAGE 94 (144)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHHHTCHH-HHHHHHHHHHHHHHHHHHHHHHHTTTCCTTTSCCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCcccCCCCCcHHHHHHHHHHhH
Confidence 3333346999998643 1111111124443 344456899999999998888886420 01
Q ss_pred ----CCCcHHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHH
Q 041347 96 ----LNVLPTAISRFRNGGDNETAELLERVVYREEITHCA 131 (189)
Q Consensus 96 ----LDv~P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa 131 (189)
-+.=|.+++.-+.-|+...+++++ -|..+|-.|..
T Consensus 95 ~~e~~~~Y~~~a~~A~~eG~~~ia~~f~-~~a~~E~~Ha~ 133 (144)
T 4di0_A 95 THEYTDMYPGMAKTARDEGFEEIANWFE-TLAKAERSHAN 133 (144)
T ss_dssp HHHHHTHHHHHHHHHHHHTCHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCcHHHHHHHH-HHHHHHHHHHH
Confidence 123366677777789999999999 48999999964
No 66
>2d5k_A DPS, DPS family protein; four helix bundle, metal binding protein; 1.85A {Staphylococcus aureus subsp}
Probab=65.85 E-value=7.9 Score=29.35 Aligned_cols=24 Identities=13% Similarity=0.248 Sum_probs=19.9
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHH
Q 041347 69 MDFVKVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 69 ~Dwl~VA~DEarHF~LL~~rL~el 92 (189)
.=+-+.+.+|..|+-.+.+|+..+
T Consensus 43 ~~~~~~~~ee~~had~iaERI~~l 66 (156)
T 2d5k_A 43 VKFEELYNEASQYVDELAERILAV 66 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC
Confidence 333467888889999999999999
No 67
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=64.90 E-value=28 Score=27.79 Aligned_cols=104 Identities=18% Similarity=0.112 Sum_probs=67.5
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHH--H--------------H-----
Q 041347 34 AIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLE--E--------------L----- 92 (189)
Q Consensus 34 alLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~--e--------------l----- 92 (189)
..|-.--.-|++|..+.+-...-+. ..++|. +-.=|...|.+|..|...+-++|. . +
T Consensus 11 ~~Ln~a~~~E~~A~~~Yl~~A~~a~-~~G~~~-iA~~f~~~A~eE~~HA~~~~~~l~gg~~~i~~~~p~~~~~s~~e~l~ 88 (191)
T 1lko_A 11 KNILTAFAGESQARNRYNYFGGQAK-KDGFVQ-ISDIFAETADQEREHAKRLFKFLEGGDLEIVAAFPAGIIADTHANLI 88 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HTTCHH-HHHHHHHHHHHHHHHHHHHHHHCCSSCCCCCCCCCCCCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HCCcHH-HHHHHHHHHHHHHHHHHHHHHHHcCCCccccCcCCccccCCHHHHHH
Confidence 3444455679999998764433332 235553 333344689999999999999984 0 0
Q ss_pred --HccC-----CCcHHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHH
Q 041347 93 --ARGL-----NVLPTAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYL 140 (189)
Q Consensus 93 --ARGL-----Dv~P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~l 140 (189)
..|= +.=|.+++.-+..||..++..|+ -|..+|..|-..=.+.+..+
T Consensus 89 ~al~~E~~e~t~~y~~~~~~A~eegd~~~~~~f~-~~~~~E~ehe~~~~~~l~~l 142 (191)
T 1lko_A 89 ASAAGEHHEYTEMYPSFARIAREEGYEEIARVFA-SIAVAEEFHEKRFLDFARNI 142 (191)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHhCcHHHHHHHH-HHHHHHHHHHHHHHHHHHhh
Confidence 1111 22345555667789999999999 58999999976444444433
No 68
>1tjo_A Iron-rich DPSA-homolog protein; ferritin, low-iron, metal binding protein; 1.60A {Halobacterium salinarum} SCOP: a.25.1.1 PDB: 1moj_A 1tk6_A 1tko_A 1tkp_A
Probab=64.20 E-value=11 Score=29.50 Aligned_cols=61 Identities=23% Similarity=0.232 Sum_probs=40.7
Q ss_pred HHhHH-HHHHHHHHHHHHHHHHHHHH-----H--------------c-c-CCCcHHH------------------HHHHH
Q 041347 68 FMDFV-KVAQDKGRHFTLLAAQLEEL-----A--------------R-G-LNVLPTA------------------ISRFR 107 (189)
Q Consensus 68 y~Dwl-~VA~DEarHF~LL~~rL~el-----A--------------R-G-LDv~P~~------------------i~k~~ 107 (189)
+..|+ +.+.+|..|+-.+.+|+..| + . | .|+ +.+ ++.-.
T Consensus 63 lh~~~ee~~~e~~~haD~laERI~~LGg~P~~~~~~~~~~s~i~e~~~~~~~~-~e~l~~~l~~e~~~i~~~r~~i~~a~ 141 (182)
T 1tjo_A 63 LHLFLGEAAETAEEVADELAERVQALGGVPHASPETLQAEASVDVEDEDVYDI-RTSLANDMAIYGDIIEATREHTELAE 141 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCSSBCCH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444 56788889999999999999 0 1 1 121 122 12224
Q ss_pred cCCCHHHHHHHHHhhhhhhhhhH
Q 041347 108 NGGDNETAELLERVVYREEITHC 130 (189)
Q Consensus 108 ~~GD~~sa~iLe~iI~~DEI~HV 130 (189)
..||..|+++|+. |+.+|-.|+
T Consensus 142 e~~D~~T~dll~~-~l~~~Ek~~ 163 (182)
T 1tjo_A 142 NLGDHATAHMLRE-GLIELEDDA 163 (182)
T ss_dssp HTTCHHHHHHHHH-HHHHHHHHH
T ss_pred HCCCHHHHHHHHH-HHHHHHHHH
Confidence 6789999999985 777777775
No 69
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=62.73 E-value=48 Score=25.11 Aligned_cols=62 Identities=16% Similarity=0.078 Sum_probs=45.6
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHHcc
Q 041347 29 LQNRQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELARG 95 (189)
Q Consensus 29 ~~~RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elARG 95 (189)
..+-...|-.....|..||++.-.++-... + .+-..=+-+++.||..|..+|.+.|..+.+|
T Consensus 103 ~~~~~~~L~~ai~~E~~a~~~Y~~~a~~~~---d--~~~r~l~~~ia~eE~~H~~~l~~~l~~l~~~ 164 (175)
T 2fzf_A 103 VQDIIDLIRWAMKAEEIAAEFYLKLEEMVK---E--EEKKRLMRYLADMERGHYYTLRAEYELLLNW 164 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSC---S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHhhCC---C--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 345566777777899999999766555542 2 3334446689999999999999999988655
No 70
>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=61.95 E-value=30 Score=29.76 Aligned_cols=112 Identities=12% Similarity=0.104 Sum_probs=68.6
Q ss_pred CCChhhHHHHHHHHHhHHHHHHHH--HHHHHhhcCCCCCCCh--hHHHhHHHHHHHHHHHHHHHHHHHHHHHcc------
Q 041347 26 GNGLQNRQAIVHSLAHTESWAIDL--SWDIIARFGKQKAMPR--EFFMDFVKVAQDKGRHFTLLAAQLEELARG------ 95 (189)
Q Consensus 26 ~~s~~~RaalLHaiAHIEl~AIdL--A~Dai~RF~~~~~lP~--~Fy~Dwl~VA~DEarHF~LL~~rL~elARG------ 95 (189)
..++..|..+.|.++=.= +.|- +-..+-+|...-..|. .||. ..+..|+.|-..+..-|..+...
T Consensus 47 ~Lt~~Er~~~~~~l~~~~--~~D~iq~~~~~~~~~~~~~~pe~~~~~~---~q~~~E~iHs~sYs~il~tl~~~~e~~~~ 121 (319)
T 3n37_A 47 TLTVVEQQLTMRVFTGLT--LLDTLQNVIGAPSLMPDALTPHEEAVLS---NISFMEAVHARSYSSIFSTLCQTKDVDAA 121 (319)
T ss_dssp TSCHHHHHHHHHHHHHHH--HHHHHHHHTHHHHHGGGCSSHHHHHHHH---HHHHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHH--HHHHHHHHhhHHHHHHHcCCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 358888888888887321 1111 0011123321112342 3444 45899999999999988877211
Q ss_pred ---CCCcHHHHHH-------------------------------------HHcCCC-HHHHHHHHHhhhhhhhhhHHhhh
Q 041347 96 ---LNVLPTAISR-------------------------------------FRNGGD-NETAELLERVVYREEITHCAARV 134 (189)
Q Consensus 96 ---LDv~P~~i~k-------------------------------------~~~~GD-~~sa~iLe~iI~~DEI~HVa~G~ 134 (189)
..-+|.+.+| |...|- ..++++++ .|.+||.-|+.+|.
T Consensus 122 f~~i~~~p~l~~K~~~i~~~~~~~~~~~~~va~~~lEgi~Fys~F~~~~~l~~~g~m~g~~~~i~-~I~RDE~~H~~f~~ 200 (319)
T 3n37_A 122 YAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIR-LIIRDEAVHGYYIG 200 (319)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHTTCSHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred HHHHhhCHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhHHHHHH-HHHHhHHHHHHHHH
Confidence 1234444443 233343 34567888 69999999999999
Q ss_pred HHHHHHHHH
Q 041347 135 RWFRYLCLR 143 (189)
Q Consensus 135 rWF~~lC~~ 143 (189)
..|+.+.++
T Consensus 201 ~l~~~~~~~ 209 (319)
T 3n37_A 201 YKYQKNMEK 209 (319)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHh
Confidence 999988754
No 71
>3kwo_A Putative bacterioferritin; alpha-helix, bacterial ferritin fold, structural genomics, center for structural genomics of infectious diseases; 1.99A {Campylobacter jejuni} SCOP: a.25.1.0
Probab=61.07 E-value=14 Score=28.00 Aligned_cols=59 Identities=15% Similarity=0.079 Sum_probs=39.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH--------------------HccC-CCcHHHHH------------------HHHcCC
Q 041347 70 DFVKVAQDKGRHFTLLAAQLEEL--------------------ARGL-NVLPTAIS------------------RFRNGG 110 (189)
Q Consensus 70 Dwl~VA~DEarHF~LL~~rL~el--------------------ARGL-Dv~P~~i~------------------k~~~~G 110 (189)
=+-+.+.++..|+-.+.+|+..| ..|- | .+.+++ .....|
T Consensus 42 ~~ee~~~~~~~~~D~iAERI~~LGg~P~~t~~~~~~~s~i~e~~~~~~~-~~eml~~~l~~~~~~i~~~r~~i~~a~~~~ 120 (152)
T 3kwo_A 42 YTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFT-PLEVIELIKQDYEYLLAEFKKLNEAAEKES 120 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCCCCHHHHHHHCCSCCCCCSCBC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 34467888889999999999888 1121 2 223333 233468
Q ss_pred CHHHHHHHHHhhhhhhhhhH
Q 041347 111 DNETAELLERVVYREEITHC 130 (189)
Q Consensus 111 D~~sa~iLe~iI~~DEI~HV 130 (189)
|..|+++|.. |+.++=.|+
T Consensus 121 D~~T~dll~~-~l~~~Ek~~ 139 (152)
T 3kwo_A 121 DTTTAAFAQE-NIAKYEKSL 139 (152)
T ss_dssp CHHHHHHHHH-HHHHHHHHH
T ss_pred CHHHHHHHHH-HHHHHHHHH
Confidence 9999999985 677776775
No 72
>4eve_A Neutrophil-activating protein; dodecamer, four-helix bundle, metal transport; 2.10A {Helicobacter pylori} PDB: 4evd_A 3t9j_A 3ta8_A 4evb_A 4evc_A 1ji4_A
Probab=57.38 E-value=17 Score=28.16 Aligned_cols=60 Identities=12% Similarity=0.077 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH--------------------HccCCCcHHHHHH------------------HHcCCC
Q 041347 70 DFVKVAQDKGRHFTLLAAQLEEL--------------------ARGLNVLPTAISR------------------FRNGGD 111 (189)
Q Consensus 70 Dwl~VA~DEarHF~LL~~rL~el--------------------ARGLDv~P~~i~k------------------~~~~GD 111 (189)
=+-+.+.++..|+-.+.+|+..| ..|---.+.+++. ....||
T Consensus 59 ~~ee~~~e~~~~~D~lAERI~~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~~ll~~~~~~i~~~r~~i~~aee~~D 138 (164)
T 4eve_A 59 ATEEIYEEFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKEETKTSFHSKDIFKEILEDYKHLEKEFKELSNTAEKEGD 138 (164)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHcCCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 34567889999999999999998 1122012333332 233688
Q ss_pred HHHHHHHHHhhhhhhhhhH
Q 041347 112 NETAELLERVVYREEITHC 130 (189)
Q Consensus 112 ~~sa~iLe~iI~~DEI~HV 130 (189)
..|+++|.. |+.++=.|+
T Consensus 139 ~~T~dll~~-il~~~Ek~~ 156 (164)
T 4eve_A 139 KVTVTYADD-QLAKLQKSI 156 (164)
T ss_dssp HHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHH
Confidence 888888885 666666664
No 73
>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2
Probab=57.11 E-value=21 Score=30.82 Aligned_cols=22 Identities=23% Similarity=0.338 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 041347 71 FVKVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 71 wl~VA~DEarHF~LL~~rL~el 92 (189)
.-++|.||+||+..+.+-++++
T Consensus 182 ~~~IA~DE~RH~~~y~~~v~~~ 203 (275)
T 1za0_A 182 IDRIARDEVRHEEFFANLVTHC 203 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3478999999999999998887
No 74
>3iq1_A DPS family protein; csgid, SAD, niaid, metal transport, STRU genomics, center for structural genomics of infectious DISE; 1.67A {Vibrio cholerae o1 biovar el tor}
Probab=56.24 E-value=14 Score=28.19 Aligned_cols=24 Identities=21% Similarity=0.238 Sum_probs=20.4
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHH
Q 041347 69 MDFVKVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 69 ~Dwl~VA~DEarHF~LL~~rL~el 92 (189)
.=+-+.+.++..|+-.+.+|+..|
T Consensus 54 ~~~ee~~~~~~~~~D~lAERI~~L 77 (159)
T 3iq1_A 54 AKFEEIYTDLQLKIDELAERILTL 77 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 334578889999999999999998
No 75
>2c2u_A DPS, DNA-binding stress response protein; DNA-binding protein, iron; 1.1A {Deinococcus radiodurans} PDB: 2c2f_A 2f7n_A
Probab=55.35 E-value=15 Score=30.00 Aligned_cols=58 Identities=12% Similarity=0.015 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-------------Hc-------c-CCCcHHHH------------------HHHHcCCC
Q 041347 71 FVKVAQDKGRHFTLLAAQLEEL-------------AR-------G-LNVLPTAI------------------SRFRNGGD 111 (189)
Q Consensus 71 wl~VA~DEarHF~LL~~rL~el-------------AR-------G-LDv~P~~i------------------~k~~~~GD 111 (189)
+-+.+.+|..|+-.|.+|+..| -. | .|+ +.|+ +.....||
T Consensus 98 ~ee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~I~e~~~g~~~~-~emL~~ll~~e~~~i~~~re~i~~aee~~D 176 (207)
T 2c2u_A 98 YDEFIAEIFPSIDEQAERLVALGGSPLAAPADLARYSTVQVPQETVRDA-RTQVADLVQDLSRVGKGYRDDSQACDEAND 176 (207)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTTBCCCCSHHHHHHHCSSCCCSSCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCCCCCcCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3456778889999999999999 11 2 222 2222 22345789
Q ss_pred HHHHHHHHHhhhhhhhhhH
Q 041347 112 NETAELLERVVYREEITHC 130 (189)
Q Consensus 112 ~~sa~iLe~iI~~DEI~HV 130 (189)
..++++|+. |+.+|-.|+
T Consensus 177 ~~T~dLl~~-il~~~Ekhi 194 (207)
T 2c2u_A 177 PVTADMYNG-YAATIDKIR 194 (207)
T ss_dssp HHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHH
Confidence 999999985 777777775
No 76
>2oc5_A Hypothetical protein; DUF3066 family protein, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.68A {Prochlorococcus marinus} SCOP: a.25.1.6
Probab=52.95 E-value=1.1e+02 Score=26.13 Aligned_cols=71 Identities=18% Similarity=0.220 Sum_probs=49.2
Q ss_pred hhHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHH-------------HHHHcCC---------------------
Q 041347 65 REFFMDFVKVAQDKGRHFTLLAAQLEELARGLNVLPTAI-------------SRFRNGG--------------------- 110 (189)
Q Consensus 65 ~~Fy~Dwl~VA~DEarHF~LL~~rL~elARGLDv~P~~i-------------~k~~~~G--------------------- 110 (189)
.+..+++.+.+.=|.||.+=.. ..+|+|.|+|.|- ++-...|
T Consensus 61 P~~~dEL~rLakME~rH~kgF~----aCGrNL~V~pDm~fA~~fF~~LH~nFq~A~~~gkv~TCLlIQaLiIE~FAIaAY 136 (244)
T 2oc5_A 61 PDHVEELKRLAKMEMRHKKGFT----ACGKNLGVEADMDFAREFFAPLRDNFQTALGQGKTPTCLLIQALLIEAFAISAY 136 (244)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHH----HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhHHH----HhccCCcCCCCcHHHHHHHHHHHHHHHHHHhcCCeeehHHHHHHHHHHHHHHHH
Confidence 3567899999999999976544 4477777776431 1111223
Q ss_pred -------CHHHHHHHHHhhhhhhhhhHHhhhHHHHHH
Q 041347 111 -------DNETAELLERVVYREEITHCAARVRWFRYL 140 (189)
Q Consensus 111 -------D~~sa~iLe~iI~~DEI~HVa~G~rWF~~l 140 (189)
|.-+.+|-+- +..||-.|..+|-.|++--
T Consensus 137 niYIpVAD~FARkITeg-VVkDEY~HLNfGe~WLk~~ 172 (244)
T 2oc5_A 137 HTYIPVSDPFARKITEG-VVKDEYTHLNYGEAWLKAN 172 (244)
T ss_dssp HHHGGGSCHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred hhccccccHHHHHHHHh-HHhhHHhhcchHHHHHHHH
Confidence 4444556663 5789999999999999753
No 77
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=52.75 E-value=34 Score=25.71 Aligned_cols=89 Identities=8% Similarity=0.031 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH--Hc---c----CC--------------
Q 041347 41 HTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL--AR---G----LN-------------- 97 (189)
Q Consensus 41 HIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el--AR---G----LD-------------- 97 (189)
.+|..+++......- . --.+...=|.+.|.+|.+|..+|.+..... .. . ++
T Consensus 24 ~~E~~~~~~Y~~lA~--~----~~~~~k~lF~~LA~eE~~H~~~l~~l~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~ 97 (157)
T 1vjx_A 24 RLEEEGERFYRELSE--H----FNGEIKKTFLELADQERIHAEIFRKMSDQENWDEVDSYLAGYAFYEVFPDTSEILRRK 97 (157)
T ss_dssp HHHHHHHHHHHHHTT--S----CCSHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTCBCCSBCCCCCCCCCTTGGGCS
T ss_pred HHHHHHHHHHHHHHH--c----CCHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhHHHHHHhhhhhhccchhhhhhccc
Confidence 578888876543222 2 124556667789999999999999886421 00 0 00
Q ss_pred ---Cc--------------HHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHH
Q 041347 98 ---VL--------------PTAISRFRNGGDNETAELLERVVYREEITHCAARVRW 136 (189)
Q Consensus 98 ---v~--------------P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rW 136 (189)
.. -.+.+-.....|....+++.. |..||-+|+..=..+
T Consensus 98 ~~~~~~~l~~ai~~E~~a~~~Y~~~a~~~~d~~~k~l~~~-la~eE~~H~~~l~~~ 152 (157)
T 1vjx_A 98 DLTLKEVLDIAISVEKDSIILYYELKDGLVNSDAQKTVKK-IIDQEKEHLRKLLEM 152 (157)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 00 112223345788888889995 899999998754333
No 78
>2cf7_A DPR; peroxide resistance, DPS-family, ferritin-like, ferroxidase, iron-binding; HET: EPE; 1.50A {Streptococcus suis} PDB: 2ux1_A* 2bw1_A* 1umn_A* 2v15_A* 2xjm_A* 2xjn_A* 2xjo_A* 2xkq_A*
Probab=52.39 E-value=18 Score=28.01 Aligned_cols=58 Identities=12% Similarity=0.180 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-----H--------------cc-C--CCcHHHHH------------------HHHcCC
Q 041347 71 FVKVAQDKGRHFTLLAAQLEEL-----A--------------RG-L--NVLPTAIS------------------RFRNGG 110 (189)
Q Consensus 71 wl~VA~DEarHF~LL~~rL~el-----A--------------RG-L--Dv~P~~i~------------------k~~~~G 110 (189)
+-+.+.+|..|+-.+.+|+..| + -| - |+ +.|++ .....|
T Consensus 55 ~ee~~~e~~~haD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~-~eml~~~l~~~~~~i~~~r~~i~~a~~~~ 133 (165)
T 2cf7_A 55 MDEYMEEIDGYLAEMSERLITLGGAPFSTLKEFSENSQLKEVLGDYNVTI-EEQLARVVEVFRYLAALFQKGFDVSDEEG 133 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCCCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 3467788889999999999999 0 11 1 21 23322 223458
Q ss_pred CHHHHHHHHHhhhhhhhhhH
Q 041347 111 DNETAELLERVVYREEITHC 130 (189)
Q Consensus 111 D~~sa~iLe~iI~~DEI~HV 130 (189)
|..|+++|.. |+.++-.|+
T Consensus 134 D~~T~dll~~-il~~~Ek~~ 152 (165)
T 2cf7_A 134 DSVTNDIFNV-AKASIEKHI 152 (165)
T ss_dssp CHHHHHHHHH-HHHHHHHHH
T ss_pred CHHHHHHHHH-HHHHHHHHH
Confidence 8888998885 677777775
No 79
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=51.78 E-value=66 Score=24.22 Aligned_cols=57 Identities=12% Similarity=0.034 Sum_probs=40.2
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 041347 31 NRQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 31 ~RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el 92 (189)
+-..+|-.--..|..|++..-.+.-+.. -..-..=+.+.|.+|..|..+|.+.+..+
T Consensus 93 ~~~~~l~~A~~~E~~a~~fY~~~a~~~~-----d~~~k~~~~~la~eE~~H~~~l~~~~~~~ 149 (167)
T 2oh3_A 93 TPYHALRYARDNEIRGMEYYKEAAANSA-----DPEVKRLGADFAAEEAEHVVALDKWIEKT 149 (167)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3444555556899999998776655553 12333345578999999999999988765
No 80
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune EVAS replication, oxidoreductase; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 4d8g_A 4d8f_A 2ani_A
Probab=51.76 E-value=14 Score=32.10 Aligned_cols=30 Identities=13% Similarity=0.141 Sum_probs=25.6
Q ss_pred HHHHHHHHhhhhhhhhhHHhhhHHHHHHHHH
Q 041347 113 ETAELLERVVYREEITHCAARVRWFRYLCLR 143 (189)
Q Consensus 113 ~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~ 143 (189)
.++++++ .|.+||.-|+.+|...|+.+.++
T Consensus 215 g~~~~i~-~I~RDE~~H~~f~~~l~~~~~~e 244 (346)
T 1syy_A 215 GIGEQYQ-YILRDETIHLNFGIDLINGIKEE 244 (346)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHH-HHHHHHHHHHHHHHHHHHHHHhh
Confidence 4466777 69999999999999999988874
No 81
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A
Probab=50.95 E-value=1.2e+02 Score=26.08 Aligned_cols=111 Identities=11% Similarity=0.032 Sum_probs=68.5
Q ss_pred CChhhHHHHHHHHHhHHHHHHHH--HHHHHhhcCCCCCCCh--hHHHhHHHHHHHHHHHHHHHHHHHHHHHcc-------
Q 041347 27 NGLQNRQAIVHSLAHTESWAIDL--SWDIIARFGKQKAMPR--EFFMDFVKVAQDKGRHFTLLAAQLEELARG------- 95 (189)
Q Consensus 27 ~s~~~RaalLHaiAHIEl~AIdL--A~Dai~RF~~~~~lP~--~Fy~Dwl~VA~DEarHF~LL~~rL~elARG------- 95 (189)
.++..|..+.|.++=. .+.|- +-..+.+|...-..|. .||. ..+..|+.|-..+..-|..+...
T Consensus 58 Lt~~Er~~~~~~l~~~--~~~D~iq~~~~~~~~~~~~~~pE~~~~~~---~q~~~E~iHs~sYs~il~tl~~~~e~~~~f 132 (329)
T 3dhz_A 58 MTPQEQLATMRVFTGL--TLLDTIQGTVGAISLLPDAETMHEEAVYT---NIAFMESVHAKSYSNIFMTLASTPQINEAF 132 (329)
T ss_dssp SCHHHHHHHHHHHHHH--HHHHHHHHHTHHHHTGGGCSSHHHHHHHH---HHHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH--HHHHHHHHHHhHHHHHHHcCCHHHHHHHH---HHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 4778888888888732 12221 1111223421112342 3444 45899999999999988887211
Q ss_pred --CCCcHHHHHH-------------------------------------HHcCCC-HHHHHHHHHhhhhhhhhhHHhhhH
Q 041347 96 --LNVLPTAISR-------------------------------------FRNGGD-NETAELLERVVYREEITHCAARVR 135 (189)
Q Consensus 96 --LDv~P~~i~k-------------------------------------~~~~GD-~~sa~iLe~iI~~DEI~HVa~G~r 135 (189)
..-+|.+.+| |...|- ..++++++ .|.+||.-|+.+|..
T Consensus 133 ~~i~~~p~l~~K~~~i~~~~~~~~~~~~~va~~~lEGi~FysgF~~~~~l~~~g~m~g~~~~i~-~I~RDE~lH~~f~~~ 211 (329)
T 3dhz_A 133 RWSEENENLQRKAKIIMSYYNGDDPLKKKVASTLLESFLFYSGFYLPMYLSSRAKLTNTADIIR-LIIRDESVHGYYIGY 211 (329)
T ss_dssp HHHHHCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHTTTHHHHHHHHHHHTTTSSHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHhhCHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHH-HHHHHHHHHHHHHHH
Confidence 1234444444 233333 34577888 699999999999999
Q ss_pred HHHHHHHH
Q 041347 136 WFRYLCLR 143 (189)
Q Consensus 136 WF~~lC~~ 143 (189)
.|+.+.++
T Consensus 212 l~~~~~~~ 219 (329)
T 3dhz_A 212 KYQQGVKK 219 (329)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 99988754
No 82
>2bk6_A Non-heme iron-containing ferritin; DPS (DNA binding protein from starved cells), ferroxidase center, mutagenesis study; 2.19A {Listeria innocua} SCOP: a.25.1.1 PDB: 1qgh_A 2bjy_A 2iy4_A 2bkc_A
Probab=46.80 E-value=25 Score=26.64 Aligned_cols=58 Identities=14% Similarity=0.151 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--------------------HccC--CCcHHHHH------------------HHHcCC
Q 041347 71 FVKVAQDKGRHFTLLAAQLEEL--------------------ARGL--NVLPTAIS------------------RFRNGG 110 (189)
Q Consensus 71 wl~VA~DEarHF~LL~~rL~el--------------------ARGL--Dv~P~~i~------------------k~~~~G 110 (189)
+-+.+.+|..|+-.+.+|+..| ..|- | .+.+++ .-...|
T Consensus 46 ~ee~~~e~~~~~D~lAERI~~Lgg~P~~~~~~~~~~s~l~e~~~~~~~~-~~eml~~~l~~~~~~i~~~r~~i~~a~~~~ 124 (156)
T 2bk6_A 46 MDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEEAPYTKPKT-MDQLMEDLVGTLELLRDEYKQGIELTDKEG 124 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCCCSCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHhHCC
Confidence 3456778889999999999999 1122 2 222322 223458
Q ss_pred CHHHHHHHHHhhhhhhhhhH
Q 041347 111 DNETAELLERVVYREEITHC 130 (189)
Q Consensus 111 D~~sa~iLe~iI~~DEI~HV 130 (189)
|..|+++|.. |+.+|-.|+
T Consensus 125 D~~T~dll~~-il~~~Ek~~ 143 (156)
T 2bk6_A 125 DDVTNDMLIA-FKASIDKHI 143 (156)
T ss_dssp CHHHHHHHHH-HHHHHHHHH
T ss_pred CHHHHHHHHH-HHHHHHHHH
Confidence 8889999985 677777775
No 83
>2yjk_A AFP, DPS; metal-binding protein, iron uptake, ferritin fold; 2.00A {Microbacterium arborescens} PDB: 2yjj_A
Probab=45.79 E-value=35 Score=26.11 Aligned_cols=22 Identities=14% Similarity=0.048 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 041347 71 FVKVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 71 wl~VA~DEarHF~LL~~rL~el 92 (189)
+-+.+.+|..|+-.+.+|+..|
T Consensus 58 ~ee~~~e~~~~aD~lAERI~~L 79 (161)
T 2yjk_A 58 LDSVVAHAQDYADTAAERIVAL 79 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 3456778889999999999999
No 84
>2c2j_A DNA-binding stress response protein; DNA-binding protein, DPS; 2.05A {Deinococcus radiodurans} PDB: 2c6r_A
Probab=44.66 E-value=31 Score=28.24 Aligned_cols=22 Identities=5% Similarity=-0.050 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 041347 71 FVKVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 71 wl~VA~DEarHF~LL~~rL~el 92 (189)
+-+.+.+|..|+-.|.+|+..|
T Consensus 85 fee~~~e~~~haD~lAERIl~L 106 (211)
T 2c2j_A 85 LQDHYEGISKFADDVAERQLSV 106 (211)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 3467788889999999999999
No 85
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=43.91 E-value=48 Score=29.29 Aligned_cols=87 Identities=15% Similarity=0.177 Sum_probs=47.2
Q ss_pred HHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH-------HccCCCcHHHHHHHHcCCCHHHHHHHHHh
Q 041347 49 LSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL-------ARGLNVLPTAISRFRNGGDNETAELLERV 121 (189)
Q Consensus 49 LA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el-------ARGLDv~P~~i~k~~~~GD~~sa~iLe~i 121 (189)
++.+++-.|..+- =-.....=+-++..++.+|..+|.+||..| +-+-++-..+...| +.....+||++
T Consensus 224 ~~~~a~e~~a~~~-~d~~~~~~~~~i~~~~~~h~~~l~~~~~~~g~~~~~~~~~~~~~a~~~~~~---~~~~~~~~l~~- 298 (365)
T 3fse_A 224 YSLEALEKYTEKE-SDVEAKALFQEMITNKQRHIEYLETYLTRLGEKPSLSANIANQYAKVKTAL---TGSDDIYQIRS- 298 (365)
T ss_dssp HHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSCC------------------CHHHHHHH-
T ss_pred hHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCcCcchhHHHHHHHHHh---cCCChHHHHHH-
Confidence 4466677776321 134555566678999999999999999999 22222222222222 22333445552
Q ss_pred hhhhhhhhHHhhhHHHHHHHHHc
Q 041347 122 VYREEITHCAARVRWFRYLCLRS 144 (189)
Q Consensus 122 I~~DEI~HVa~G~rWF~~lC~~~ 144 (189)
-| ++...|.-=...+|++.
T Consensus 299 al----~~~~~gi~~~~~l~~~~ 317 (365)
T 3fse_A 299 AL----GDIQTGIGDIGNLCAMY 317 (365)
T ss_dssp HH----HHHHHHHHHHHHHTTTC
T ss_pred Hh----cchhhhHHHHHHHHHhc
Confidence 34 44457777777777654
No 86
>2wlu_A DPS-like peroxide resistance protein; DNA-binding, oxidoreductase; 1.94A {Streptococcus pyogenes} PDB: 2wla_A
Probab=43.88 E-value=29 Score=27.13 Aligned_cols=58 Identities=12% Similarity=0.161 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-----H---------------ccC--CCcHHHHH------------------HHHcCC
Q 041347 71 FVKVAQDKGRHFTLLAAQLEEL-----A---------------RGL--NVLPTAIS------------------RFRNGG 110 (189)
Q Consensus 71 wl~VA~DEarHF~LL~~rL~el-----A---------------RGL--Dv~P~~i~------------------k~~~~G 110 (189)
+-+.+.+|..|+-.+.+|+..| + .|- |+ +.+++ .....|
T Consensus 65 ~ee~~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~-~eml~~~l~~~~~~i~~~r~~i~~ae~~~ 143 (175)
T 2wlu_A 65 MDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKHSKLDEAKGTYDKTV-AQHLARLVEVYLYLSSLYQVGLDITDEEG 143 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCCCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 3467788889999999999999 0 222 22 22222 223458
Q ss_pred CHHHHHHHHHhhhhhhhhhH
Q 041347 111 DNETAELLERVVYREEITHC 130 (189)
Q Consensus 111 D~~sa~iLe~iI~~DEI~HV 130 (189)
|..|+++|.. |+.++-.|+
T Consensus 144 D~~T~dll~~-il~~~Ek~~ 162 (175)
T 2wlu_A 144 DAGTNDLFTA-AKTEAEKTI 162 (175)
T ss_dssp CHHHHHHHHH-HHHHHHHHH
T ss_pred CHHHHHHHHH-HHHHHHHHH
Confidence 8889999985 777777775
No 87
>3ez0_A Uncharacterized protein with ferritin-like fold; YP_832262.1, protein of unknown function with ferritin-like structural genomics; HET: UNL TLA; 2.33A {Arthrobacter SP}
Probab=43.67 E-value=1.3e+02 Score=25.51 Aligned_cols=65 Identities=22% Similarity=0.261 Sum_probs=48.0
Q ss_pred hhHHHHHHHHHhHHHHHHH-HHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHH
Q 041347 30 QNRQAIVHSLAHTESWAID-LSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEELARGLNVLPTA 102 (189)
Q Consensus 30 ~~RaalLHaiAHIEl~AId-LA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~elARGLDv~P~~ 102 (189)
.+-.-+|=.+|--|+.|.+ ||-|+ ++. .+|.. .--..+.|.-|..||..|.++|.+ +|.|+...|
T Consensus 14 ~~v~~llg~lAygel~AF~RLa~da--~~A--P~L~~--r~ala~mAaae~~hf~~L~~~l~~--~G~D~~~am 79 (225)
T 3ez0_A 14 RFVADLFGMMAYGELSAFERFSADA--RYS--PTLHD--RAVLGRIAVVEFRHYELVSARLEA--MGIDAEDAM 79 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH--TTC--SSSTT--HHHHHHHHHHHHHHHHHHHHHHHH--TTCCHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHH--hhC--CCHHH--HHHHHHHHHHHHHHHHHHHHHHHH--hCCCHHHHH
Confidence 3455677788889999988 67775 554 24544 346779999999999999999996 566655443
No 88
>2pyb_A NAPA, neutrophil activating protein; ferritin, DPS, four-helix bundle, metal transport; 2.60A {Borrelia burgdorferi}
Probab=42.06 E-value=22 Score=26.84 Aligned_cols=58 Identities=17% Similarity=0.190 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--------------------HccC--CCc----------H-------HHHHHHHcCCCH
Q 041347 72 VKVAQDKGRHFTLLAAQLEEL--------------------ARGL--NVL----------P-------TAISRFRNGGDN 112 (189)
Q Consensus 72 l~VA~DEarHF~LL~~rL~el--------------------ARGL--Dv~----------P-------~~i~k~~~~GD~ 112 (189)
-+.+.+|..|+-.+.+|+..| ..|- |+. - ..|+.....||.
T Consensus 44 ee~~~e~~~~aD~lAERI~~Lgg~P~~~~~~~~~~s~l~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~~D~ 123 (151)
T 2pyb_A 44 QKLYEYIEKIIDIVAERSRMLGYDSEFRYSEFMKKSFIKELDIESTSNFLPSMESIVCSLTEILKNIFGMRKLIDTAGDY 123 (151)
T ss_dssp HHHHTTTHHHHHHHHHHHHHHTCCCCCCSTTTTTTCSSCCCCSCSSSCCCSSCCTTSTTHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCH
Confidence 356777889999999999999 1122 321 1 123333456899
Q ss_pred HHHHHHHHhhhhhhhhhH
Q 041347 113 ETAELLERVVYREEITHC 130 (189)
Q Consensus 113 ~sa~iLe~iI~~DEI~HV 130 (189)
.|+++|.. |+.++-.|+
T Consensus 124 ~T~dll~~-il~~~Ek~~ 140 (151)
T 2pyb_A 124 GTANIMDD-IMSDLEKHL 140 (151)
T ss_dssp HHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHH-HHHHHHHHH
Confidence 99999995 788887775
No 89
>1mty_B Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.25.1.2 PDB: 1xvb_C 1fyz_C 1fz0_C 1fz2_C 1fz3_C 1fz4_C 1fz5_C 1fz6_C 1fz7_C 1fz8_C 1fz9_C 1fzh_C 1fzi_C 1xu3_C 1xu5_C 1fz1_C 1xvc_C 1xvd_C 1xve_C 1xvf_C ...
Probab=41.85 E-value=1.4e+02 Score=26.68 Aligned_cols=103 Identities=10% Similarity=-0.147 Sum_probs=71.3
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH----------------------
Q 041347 35 IVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL---------------------- 92 (189)
Q Consensus 35 lLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el---------------------- 92 (189)
.+=.+.|.|+.|.--. -.+.|++ .-.....--+=-+.||-||..++.-++.++
T Consensus 143 ~l~~~r~~Eyga~~~~-a~~~r~~----~~~~i~na~~fqa~DeLRhaQ~~~~~~~~l~~~~~gf~~~~~~~k~~W~~dp 217 (384)
T 1mty_B 143 YWGAFLFNEYGLFNAH-SQGAREA----LSDVTRVSLAFWGFDKIDIAQMIQLERGFLAKIVPGFDESTAVPKAEWTNGE 217 (384)
T ss_dssp HHHHHHHHHHHHHHTT-HHHHHHC----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCSHHHHHHHHHCS
T ss_pred HHhhhhHHHHHHHHHH-HHHHHhc----CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhHHHHHHHhhCc
Confidence 4667889998886532 2467884 345555556667889999999999888887
Q ss_pred ------------------------HccCCCcH---------HHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHH
Q 041347 93 ------------------------ARGLNVLP---------TAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRY 139 (189)
Q Consensus 93 ------------------------ARGLDv~P---------~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~ 139 (189)
|-+|=+-| .+.+--...||.-+.-++.. +-.||-.|.++|.-=|++
T Consensus 218 ~wq~~R~~vE~~~l~~~Dw~E~~va~nlv~epl~~~L~~~~~~~~~Aa~nGD~~tp~l~~s-~q~D~~Rh~~w~~alvk~ 296 (384)
T 1mty_B 218 VYKSARLAVEGLWQEVFDWNESAFSVHAVYDALFGQFVRREFFQRLAPRFGDNLTPFFINQ-AQTYFQIAKQGVQDLYYN 296 (384)
T ss_dssp TTHHHHHHHHHHHHTCCCHHHHHHHHHHTHHHHHHHHHHHTTHHHHGGGGTCCHHHHHHHH-HHHHHHHHHHHHHHHHCC
T ss_pred hhHHHHHHHHHHHhhccCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCchhHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 22222222 12333345688888888885 788999999999888887
Q ss_pred HHHH
Q 041347 140 LCLR 143 (189)
Q Consensus 140 lC~~ 143 (189)
+.++
T Consensus 297 lle~ 300 (384)
T 1mty_B 297 CLGD 300 (384)
T ss_dssp CCCT
T ss_pred HHhc
Confidence 7644
No 90
>2xgw_A Peroxide resistance protein; metal binding protein; 2.10A {Streptococcus pyogenes}
Probab=41.08 E-value=32 Score=27.77 Aligned_cols=58 Identities=12% Similarity=0.161 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-----H---------------ccC--CCcHHHHH------------------HHHcCC
Q 041347 71 FVKVAQDKGRHFTLLAAQLEEL-----A---------------RGL--NVLPTAIS------------------RFRNGG 110 (189)
Q Consensus 71 wl~VA~DEarHF~LL~~rL~el-----A---------------RGL--Dv~P~~i~------------------k~~~~G 110 (189)
+-+.+.+|..|+-.+.+|+..| + .|- |+ +.+++ .....|
T Consensus 81 ~ee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~i~e~~~g~~~~~-~emL~~ll~~e~~~i~~~re~i~~aee~~ 159 (199)
T 2xgw_A 81 MDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKHSKLDEAKGTYDKTV-AQHLARLVEVYLYLSSLYQVGLDITDEEG 159 (199)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCCCCCCTTSCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCcCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 4467788889999999999999 0 122 22 22222 233468
Q ss_pred CHHHHHHHHHhhhhhhhhhH
Q 041347 111 DNETAELLERVVYREEITHC 130 (189)
Q Consensus 111 D~~sa~iLe~iI~~DEI~HV 130 (189)
|..|+++|+. |+.+|-.|+
T Consensus 160 D~~T~dll~~-il~~~Ekh~ 178 (199)
T 2xgw_A 160 DAGTNDLFTA-AKTEAEKTI 178 (199)
T ss_dssp CHHHHHHHHH-HHHHHHHHH
T ss_pred CHHHHHHHHH-HHHHHHHHH
Confidence 8899999985 777877776
No 91
>3ge3_B Toluene-4-monooxygenase system protein E; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} PDB: 3ge8_B 3i5j_B 3i63_B 3dhi_B* 3dhh_B* 3dhg_B* 3q14_B 3q2a_B* 3q3m_B* 3q3n_B* 3q3o_B* 3rmk_B* 3ri7_B
Probab=38.62 E-value=2e+02 Score=25.03 Aligned_cols=40 Identities=8% Similarity=0.001 Sum_probs=34.7
Q ss_pred HHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHHH
Q 041347 103 ISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLCLR 143 (189)
Q Consensus 103 i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~ 143 (189)
.+-....||..+.-++. -+..||-.|.++|.-=|++++++
T Consensus 236 ~~~Aa~nGD~~t~~l~~-s~qsD~~Rh~~~~~alvk~ll~~ 275 (327)
T 3ge3_B 236 QQQAWENNDTLLPLLID-SQLKDAERHSRWSKALVKHALEN 275 (327)
T ss_dssp HHHHHHTTCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHCCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHhcC
Confidence 45667789999888998 48999999999999999998876
No 92
>2clb_A DPS-like protein; DI-iron carboxylate, hypothetical protein, bacterioferritin, hydrogen peroxide, metal binding protein, archaea; 2.4A {Sulfolobus solfataricus}
Probab=38.25 E-value=85 Score=24.54 Aligned_cols=57 Identities=12% Similarity=0.014 Sum_probs=35.7
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCC-hhHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 041347 33 QAIVHSLAHTESWAIDLSWDIIARFGKQKAMP-REFFMDFVKVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 33 aalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP-~~Fy~Dwl~VA~DEarHF~LL~~rL~el 92 (189)
+.+|-.+-.-|+.++....-..+-.. +.- ..+-.=+-+.+.+|..|+-.+.+|+..|
T Consensus 27 ~~~LN~~La~e~~~~~~y~~~hw~v~---G~~f~~lh~~f~~~~~ee~~haD~iaERI~~L 84 (188)
T 2clb_A 27 VDKLVKATAAEFTTYYYYTILRMHLT---GMEGEGLKEIAEDARLEDRLHFELMTQRIYEL 84 (188)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCC---HHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 44455555556888887654444221 111 1223333467888999999999999999
No 93
>2inc_B Toluene, O-xylene monooxygenase oxygenase subunit; DIIRON, 4-helix bundle, carboxylate bridge, metalloenzyme, oxidoreductase; HET: P6G; 1.85A {Pseudomonas stutzeri} SCOP: a.25.1.2 PDB: 3n20_B* 1t0r_B 1t0s_B 1t0q_B* 3n1x_B 3n1y_B* 3n1z_B* 2rdb_B* 3rn9_B* 3rna_B 3rnb_B 3rnc_B 3rne_B 3rnf_B* 3rng_B 2ind_B*
Probab=34.31 E-value=2.3e+02 Score=24.46 Aligned_cols=99 Identities=16% Similarity=-0.014 Sum_probs=66.9
Q ss_pred HHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH--------------------------
Q 041347 39 LAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL-------------------------- 92 (189)
Q Consensus 39 iAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el-------------------------- 92 (189)
+-|.|+.|. ++.-.+.|++ .-.....--+=-+.||-||..++.-+..+|
T Consensus 121 ~~~~e~~~~-~~~a~~~r~~----~~~~i~n~~~~qa~DelR~aQ~~~y~~~~L~~~~~~~g~~~~~k~~w~~~p~wq~~ 195 (322)
T 2inc_B 121 ARYLFHALQ-MGSVYIHQIA----PASTITNCATYETADHLRWLTHTAYRTRELANCYPDVGFGKRERDVWENDPAWQGF 195 (322)
T ss_dssp HHHHHHHHH-HHHHHHHHHC----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCTTTSHHHHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHhc----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccchHHHHHHhcCchhHHH
Confidence 346666543 2333467884 344555556667789999999655444344
Q ss_pred ------------------HccCCCcH--------HHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHHH
Q 041347 93 ------------------ARGLNVLP--------TAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLCLR 143 (189)
Q Consensus 93 ------------------ARGLDv~P--------~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~ 143 (189)
|-+|=+-| .+.+-....||..+.-++. -|-.||-.|.+.|.-=|+++.++
T Consensus 196 R~~~E~~~~~~Dw~E~~va~nlv~e~l~~~l~~~~~~~~Aa~nGD~~t~~l~~-s~q~D~~Rh~~~~~alvk~~~~~ 271 (322)
T 2inc_B 196 RELIEKALIAWDWGEAFTAINLVTKPAVEEALLQQLGSLAQSEGDTLLGLLAQ-AQKRDAERHRRWSSALVKMALEK 271 (322)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHTTHHHHHHHHHTHHHHHHHHHTTCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHhhccCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHcC
Confidence 33332111 1345566889999999999 58999999999999999998876
No 94
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, C monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis} PDB: 4ac8_A*
Probab=34.21 E-value=42 Score=29.02 Aligned_cols=30 Identities=20% Similarity=0.039 Sum_probs=25.3
Q ss_pred HHHHHHHHhhhhhhhhhHHhhhHHHHHHHHH
Q 041347 113 ETAELLERVVYREEITHCAARVRWFRYLCLR 143 (189)
Q Consensus 113 ~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~ 143 (189)
.++++++ .|.+||.-|+.+|..=|+.+.++
T Consensus 199 G~~~~i~-lI~RDE~~H~~f~~~l~~~l~~e 228 (323)
T 3ee4_A 199 GMQELVR-RIGDDERRHMAWGTFTCRRHVAA 228 (323)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456777 69999999999999999998876
No 95
>2e0z_A Virus-like particle; bacteriophage, HK97; 3.60A {Pyrococcus furiosus}
Probab=33.92 E-value=8.6 Score=34.15 Aligned_cols=66 Identities=18% Similarity=0.072 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH--------HccCCCcHHHHHHHHcCCC
Q 041347 41 HTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL--------ARGLNVLPTAISRFRNGGD 111 (189)
Q Consensus 41 HIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el--------ARGLDv~P~~i~k~~~~GD 111 (189)
..|+.||+.....+-.- --.+-..=+...|.||.+|+.++.+.|..+ ..|-.=-..++.+.+..+|
T Consensus 29 ~~E~eAi~~Y~q~A~~~-----~d~~~K~vl~~ia~EEk~H~~~f~~ll~~l~~~~~~~~~~g~~ev~e~~~~~~~~~~ 102 (345)
T 2e0z_A 29 IAELDAINLYEQMARYS-----EDENVRKILLDVAREEKAHVGEFMALLLNLDPEQVTELKGGFEEVKELTGIEAHIND 102 (345)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHhhhcccCC
No 96
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=32.38 E-value=43 Score=28.92 Aligned_cols=30 Identities=20% Similarity=0.315 Sum_probs=25.8
Q ss_pred HHHHHHHHhhhhhhhhhHHhhhHHHHHHHHH
Q 041347 113 ETAELLERVVYREEITHCAARVRWFRYLCLR 143 (189)
Q Consensus 113 ~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~ 143 (189)
.++++++ .|.+||.-|+.+|..=|+.+.++
T Consensus 208 g~~~~i~-~I~RDE~~H~~f~~~l~~~l~~e 237 (346)
T 2rcc_A 208 STSTMIN-YINRDEQLHVYLFTNIFKELLVE 237 (346)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHH-HHHhhHHHHHHHHHHHHHHHHhc
Confidence 5567788 69999999999999999988874
No 97
>1mhy_B Methane monooxygenase hydroxylase; oxidoreductase, NADP, one-carbon metabolism; 2.00A {Methylosinus trichosporium} SCOP: a.25.1.2 PDB: 1mhz_B
Probab=32.27 E-value=2.4e+02 Score=25.23 Aligned_cols=105 Identities=14% Similarity=0.010 Sum_probs=69.1
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH---HccCCC-----------
Q 041347 33 QAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL---ARGLNV----------- 98 (189)
Q Consensus 33 aalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el---ARGLDv----------- 98 (189)
...+=.+.|.|+.|.--. -.+.|++ .-.....--+=-+.||-||..++.-++.++ --|.+.
T Consensus 149 ~~~l~p~r~~Eyga~~~~-a~~~r~~----~~~~i~na~~fqa~DeLRhaQ~~~~~~~~l~~~~~g~~~~~~~~k~~W~~ 223 (395)
T 1mhy_B 149 NKYFGALLYSEYGLFNAH-SSVGRDC----LSDTIRQTAVFAALDKVDNAQMIQMERLFIAKLVPGFDASTDVPKKIWTT 223 (395)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHHHC----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCSHHHHHHHHH
T ss_pred HHHHhhhhHHHHHHHHHH-HHHHhhc----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHhh
Confidence 445667889999887532 2478884 445555666667889999999999887777 011110
Q ss_pred ------cHHH-----------------------------------HHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHH
Q 041347 99 ------LPTA-----------------------------------ISRFRNGGDNETAELLERVVYREEITHCAARVRWF 137 (189)
Q Consensus 99 ------~P~~-----------------------------------i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF 137 (189)
.-.+ .+--...||.-+..++.. +..||-.|.++|.-=|
T Consensus 224 dp~Wq~~R~~~E~~~l~~~Dw~E~~vA~nlv~E~l~~~L~~~~~~~~~Aa~nGD~~tptl~~s-~q~D~~Rh~~~~~alv 302 (395)
T 1mhy_B 224 DPIYSGARATVQEIWQGVQDWNEILWAGHAVYDATFGQFARREFFQRLATVYGDTLTPFFTAQ-SQTYFQTTRGAIDDLF 302 (395)
T ss_dssp CGGGHHHHHHHHHHHHSCCCHHHHHHHHHHTHHHHHHHHHHTTTHHHHHTTTTCSSHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCchhHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 0111 122234577777777774 7889999999888777
Q ss_pred HHHHHH
Q 041347 138 RYLCLR 143 (189)
Q Consensus 138 ~~lC~~ 143 (189)
+++.++
T Consensus 303 k~lle~ 308 (395)
T 1mhy_B 303 VYCLAN 308 (395)
T ss_dssp CCCCCT
T ss_pred HHHHhc
Confidence 776633
No 98
>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A
Probab=32.16 E-value=33 Score=30.60 Aligned_cols=20 Identities=35% Similarity=0.488 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 041347 73 KVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 73 ~VA~DEarHF~LL~~rL~el 92 (189)
.+|.||.||+..+.+-++.+
T Consensus 199 ~IA~DE~RH~~~Y~~~v~~~ 218 (338)
T 2uw1_A 199 SIASDEKRHATAYTKIVEKL 218 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999988776
No 99
>4a58_A Ribonucleoside-diphosphate reductase small chain; oxidoreductase, epstein-BARR virus, R2 subunit; 1.68A {Human herpesvirus 4} PDB: 4a5c_A 4a5d_A 4a5e_A 4a5f_A 4a5h_A 4a5i_A 4a5j_A
Probab=30.77 E-value=74 Score=27.44 Aligned_cols=108 Identities=10% Similarity=0.030 Sum_probs=64.2
Q ss_pred CChhhHHHHHHHHHhHHHHHHHH----HHHHHhhcCCCCCCC--hhHHHhHHHHHHHHHHHHHHHHHHHHHHHc------
Q 041347 27 NGLQNRQAIVHSLAHTESWAIDL----SWDIIARFGKQKAMP--REFFMDFVKVAQDKGRHFTLLAAQLEELAR------ 94 (189)
Q Consensus 27 ~s~~~RaalLHaiAHIEl~AIdL----A~Dai~RF~~~~~lP--~~Fy~Dwl~VA~DEarHF~LL~~rL~elAR------ 94 (189)
.++..|-.+.|.++= |.+.|- .+..++.. -..| +.||. ..+..|+.|-+.+..-+..+..
T Consensus 64 Lt~~Er~~~~~vl~~--~~~~D~iv~~nl~~l~~~---i~~pE~~~~l~---~q~~~E~iHs~sYs~il~tl~~~d~~e~ 135 (324)
T 4a58_A 64 LNERDLEFYKFLFTF--LAMAEKLVNFNIDELVTS---FESHDIDHYYT---EQKAMENVHGETYANILNMLFDGDRAAM 135 (324)
T ss_dssp SCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHTT---CCCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHTTTCHHHH
T ss_pred CCHHHHHHHHHHHHH--HHHhHHHHHhhHHHHHHH---CCcHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 377888888888774 223331 12122222 1234 34444 4588999999998888877610
Q ss_pred -----cCCCcHHHHHH--------------------------------------HHcCCCH-HHHHHHHHhhhhhhhhhH
Q 041347 95 -----GLNVLPTAISR--------------------------------------FRNGGDN-ETAELLERVVYREEITHC 130 (189)
Q Consensus 95 -----GLDv~P~~i~k--------------------------------------~~~~GD~-~sa~iLe~iI~~DEI~HV 130 (189)
-..-+|.+.+| |...|-. .++++++ .|.+||.-|+
T Consensus 136 ~~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~~~lva~~~lEgi~FysgF~~~~~l~~~g~m~g~~~~i~-~I~RDE~lH~ 214 (324)
T 4a58_A 136 NAYAEAIMTDEALQAKISWLRDKVAAAVTLPEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANN-YISRDELLHT 214 (324)
T ss_dssp HHHHHHHHTCGGGHHHHHCCCCCHHHCSSHHHHHHHHHHHHHTTTHHHHHHHHHHHHHTCCHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhHHHHHH-HHHHHHHHHH
Confidence 11122222222 2222322 4467887 6999999999
Q ss_pred HhhhHHHHHHHHH
Q 041347 131 AARVRWFRYLCLR 143 (189)
Q Consensus 131 a~G~rWF~~lC~~ 143 (189)
.+|..=|+.+.+.
T Consensus 215 ~f~~~l~~~l~~~ 227 (324)
T 4a58_A 215 RAASLLYNSMTAK 227 (324)
T ss_dssp HHHHHHHHHHSCG
T ss_pred HHHHHHHHHHHHh
Confidence 9999877777653
No 100
>1dp7_P MHC class II transcription factor HRFX1; winged helix, protein- DNA conovel mode of DNA recognition, transcription/DNA complex; HET: DNA BRU; 1.50A {Synthetic} SCOP: a.4.5.20
Probab=29.48 E-value=62 Score=22.77 Aligned_cols=26 Identities=15% Similarity=0.284 Sum_probs=21.9
Q ss_pred HHHHHcCCCCCccCccccccccccCCCCCcchhhHHHHHHHHHHHhhccC
Q 041347 139 YLCLRSGYPTLLQDSLAPLESEAGENGCTTEENEEFIQNFRAMVRTHFRG 188 (189)
Q Consensus 139 ~lC~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~lv~~~f~g 188 (189)
-.|++.++.|.. .+.|-++||.-|.+
T Consensus 28 ~~C~~~~~~pl~------------------------~a~FGK~ir~~FP~ 53 (76)
T 1dp7_P 28 LHSQEQKLEPVN------------------------AASFGKLIRSVFMG 53 (76)
T ss_dssp HHHHHTTCCCCC------------------------HHHHHHHHHHHSTT
T ss_pred HHHHhcCCccCC------------------------HHHHHHHHHHHCCC
Confidence 359999999855 89999999999975
No 101
>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A
Probab=28.98 E-value=79 Score=25.50 Aligned_cols=94 Identities=27% Similarity=0.326 Sum_probs=62.3
Q ss_pred HHHHHHHHhHHHHH-HHHH--HHHHhhcCCCCCCChhHHHhHHHHHHHHHHHHHHHHHHHHHH-----------------
Q 041347 33 QAIVHSLAHTESWA-IDLS--WDIIARFGKQKAMPREFFMDFVKVAQDKGRHFTLLAAQLEEL----------------- 92 (189)
Q Consensus 33 aalLHaiAHIEl~A-IdLA--~Dai~RF~~~~~lP~~Fy~Dwl~VA~DEarHF~LL~~rL~el----------------- 92 (189)
...|-+-++=|..+ .+.. +--++|- .+.| +--.=|-.+|..|..|-..+.+.|..+
T Consensus 26 ~eNL~~A~~GE~~E~~~~Y~~fA~~A~~---EG~~-~IA~~F~~~A~~E~~HA~r~~kll~~l~~~~~~~~~~~~~~v~~ 101 (179)
T 3qhb_A 26 DANAASSIEVEMYECDCMYPTFAEIARR---SGQP-EIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVST 101 (179)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHH---TTCH-HHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHH---cChH-HHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccc
Confidence 34455566677777 4432 2223333 2444 333445589999999988888877531
Q ss_pred -----------Hcc----------------CCCcHHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHH
Q 041347 93 -----------ARG----------------LNVLPTAISRFRNGGDNETAELLERVVYREEITHCA 131 (189)
Q Consensus 93 -----------ARG----------------LDv~P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa 131 (189)
..+ -+.=|.+.+.-+.-|+.+.++.++ -|..+|-.|..
T Consensus 102 ~~~p~~~~~~T~eN~~~~L~~A~~GE~~E~~~mYp~fA~~A~eEG~~eiA~~F~-~ia~~Ek~H~~ 166 (179)
T 3qhb_A 102 IESQIDAVASDSRGLRRALETALEVETIESQKTYPAFAKLAAEQGNMEVATAFE-AIVKSETKHAN 166 (179)
T ss_dssp HHHTHHHHHHSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHH-HHHHHHHHHHH
T ss_pred ccccccccCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCCCHHHHHHHH-HHHHHHHHHHH
Confidence 111 244577788888899999999999 58999999975
No 102
>2p1i_A Ribonucleotide reductase, small chain; F222 twinning, plasmodb PY03671, S genomics consortium, SGC, oxidoreductase; 2.70A {Plasmodium yoelii yoelii}
Probab=28.56 E-value=40 Score=29.39 Aligned_cols=28 Identities=18% Similarity=0.078 Sum_probs=22.1
Q ss_pred HHHHHHHHhhhhhhhhhHHhhhHHHHHHH
Q 041347 113 ETAELLERVVYREEITHCAARVRWFRYLC 141 (189)
Q Consensus 113 ~sa~iLe~iI~~DEI~HVa~G~rWF~~lC 141 (189)
.++++++ .|.+||.-|+.+|..=|+.+.
T Consensus 214 g~~~~i~-~I~RDE~~H~~f~~~l~~~l~ 241 (349)
T 2p1i_A 214 GLTFSNE-LISRDEGLHTDFNCLIYSLLE 241 (349)
T ss_dssp THHHHHH-HHHHHHHHHHHHHHHHHHTCS
T ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 4566777 699999999999877666555
No 103
>3ak8_A DNA protection during starvation protein; DPS-like protein, dodecamer, iron-binding protein, metal BIN protein, oxidoreductase; HET: DNA; 1.25A {Salmonella enterica subsp} PDB: 3ak9_A* 1f33_A* 1f30_A* 1dps_A 1jts_A* 1jre_A* 1l8h_A* 1l8i_A* 4dyu_A*
Probab=27.22 E-value=1.6e+02 Score=22.52 Aligned_cols=55 Identities=9% Similarity=-0.024 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHcCCC-----HHHHHHHHHhhhhhh
Q 041347 71 FVKVAQDKGRHFTLLAAQLEELARGLNVLPTAISRFRNGGD-----NETAELLERVVYREE 126 (189)
Q Consensus 71 wl~VA~DEarHF~LL~~rL~elARGLDv~P~~i~k~~~~GD-----~~sa~iLe~iI~~DE 126 (189)
+-+.+.+|..|+-.+.+|+..|+-==+.++.-..++...++ ....++|+ .++.+|
T Consensus 66 ~ee~~~e~~~~aD~lAERI~~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~-~~l~~~ 125 (167)
T 3ak8_A 66 LDGFRTALTDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLK-ELADRY 125 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCSSCCBHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHH-HHHHHH
Confidence 34677888899999999999995555666666666654442 23445665 244444
No 104
>2p1h_A APAF-1, apoptotic protease-activating factor 1; folding, unfolding, apoptosis; 1.59A {Homo sapiens} SCOP: a.77.1.3 PDB: 1cww_A 1c15_A 1cy5_A 3ygs_C 2ygs_A
Probab=24.51 E-value=1.7e+02 Score=19.94 Aligned_cols=58 Identities=12% Similarity=0.134 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHccCC-------------CcHHHHHHHHcCCCH--HHHHHHHHhhhhhhhhhHHhhhHHHHHHHHH
Q 041347 79 GRHFTLLAAQLEELARGLN-------------VLPTAISRFRNGGDN--ETAELLERVVYREEITHCAARVRWFRYLCLR 143 (189)
Q Consensus 79 arHF~LL~~rL~elARGLD-------------v~P~~i~k~~~~GD~--~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~ 143 (189)
.+|-.+|.+.-..|.+.|+ .|+...+.+++..-. ++.++|+ +| ...|..||..+|+.
T Consensus 5 ~~~r~~L~~~r~~Lv~~l~v~~lld~L~~~~vlt~~~~e~I~~~~t~~~kar~Lld-~l-------~~kG~~af~~F~~a 76 (94)
T 2p1h_A 5 AKARNCLLQHREALEKDIKTSYIMDHMISDGFLTISEEEKVRNEPTQQQRAAMLIK-MI-------LKKDNDSYVSFYNA 76 (94)
T ss_dssp HHHHHHHHHTHHHHHHHCCHHHHHHHHHHHTSSCHHHHHHHHTSSSHHHHHHHHHH-HH-------TTSCHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHcCCChHHHHHHHHH-HH-------HHcCHHHHHHHHHH
Confidence 3455555555555544444 344555555554322 2344665 33 47999999999984
Q ss_pred c
Q 041347 144 S 144 (189)
Q Consensus 144 ~ 144 (189)
-
T Consensus 77 L 77 (94)
T 2p1h_A 77 L 77 (94)
T ss_dssp H
T ss_pred H
Confidence 3
No 105
>2z90_A Starvation-inducible DNA-binding protein or FINE tangled PILI major subunit; quarternary assembly, ferroxidation; 2.40A {Mycobacterium smegmatis str}
Probab=23.53 E-value=1.9e+02 Score=21.84 Aligned_cols=72 Identities=7% Similarity=0.030 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHcCCC-----HHHHHHHHHhhhhhhhhhHHhhhHHHHHHHHHc
Q 041347 71 FVKVAQDKGRHFTLLAAQLEELARGLNVLPTAISRFRNGGD-----NETAELLERVVYREEITHCAARVRWFRYLCLRS 144 (189)
Q Consensus 71 wl~VA~DEarHF~LL~~rL~elARGLDv~P~~i~k~~~~GD-----~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~~ 144 (189)
+-+.+.+|..|+-.+.+|+..|+-==+.++.-..++...++ ....++|+ .++.+|-.=+. -.|=..-+|+..
T Consensus 56 ~ee~~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~-~~l~~~~~~i~-~~r~~i~~a~~~ 132 (161)
T 2z90_A 56 LDELVDFAREGSDTIAERMRALDAVPDGRSDTVAATTTLPEFPAFERSTADVVD-LITTRINATVD-TIRRVHDAVDAE 132 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCSSCEEHHHHHH-HHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCCCCHHHHHH-HHHHHHHHHHH-HHHHHHHHhcCC
Confidence 34677888899999999999997666777777777775552 34456777 35555543222 222234456655
No 106
>1d8w_A L-rhamnose isomerase; beta-alpha-8-barrels, aldose-ketose isomerization, hydride shift; 1.60A {Escherichia coli} SCOP: c.1.15.2 PDB: 1de5_A* 1de6_A*
Probab=22.63 E-value=1.4e+02 Score=27.63 Aligned_cols=51 Identities=24% Similarity=0.355 Sum_probs=40.9
Q ss_pred HHccCCCcHHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHHHcCCCC
Q 041347 92 LARGLNVLPTAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLCLRSGYPT 148 (189)
Q Consensus 92 lARGLDv~P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~~g~~p 148 (189)
+++.|=+-....++++..||.-.+..| .||..=.-+|.-| .|.|.+.+.+.
T Consensus 356 ll~ALL~p~~~L~~~q~~gD~~~~lal-----~Ee~k~~P~~avw-d~~c~~~~vp~ 406 (426)
T 1d8w_A 356 LLRALLEPTAELRKLEAPGDYTARLAL-----LEEQKSLPWQAVW-EMYCQRHDTPA 406 (426)
T ss_dssp HHHHHTSCHHHHHHHHTTTCHHHHHHH-----HHHHTTSCHHHHH-HHHHHHTTCCC
T ss_pred HHHHHCCCHHHHHHHHHcCCHHHHHHH-----HHHHhcCChHHHH-HHHHHHcCCCC
Confidence 377777788889999999998665433 3788888999999 78899999965
No 107
>2yw6_A DNA protection during starvation protein; DNA-binding protein, quarternary assembly, ferroxidation, oxidoreductase; HET: DNA; 2.53A {Mycobacterium smegmatis} SCOP: a.25.1.1 PDB: 1vei_A 1vel_A 1veq_A 1uvh_A* 2yw7_A
Probab=22.06 E-value=2.1e+02 Score=22.32 Aligned_cols=22 Identities=9% Similarity=-0.070 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 041347 71 FVKVAQDKGRHFTLLAAQLEEL 92 (189)
Q Consensus 71 wl~VA~DEarHF~LL~~rL~el 92 (189)
+-+.+.+|..|+-.|.+|+..|
T Consensus 54 ~ee~~~e~~~haD~lAERIl~L 75 (183)
T 2yw6_A 54 IDPQVELVRGYADEVAERIATL 75 (183)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 3456788889999999999999
No 108
>1mxr_A Ribonucleotide reductase R2; radical protein, DI iron, oxidoreductase; 1.42A {Escherichia coli} SCOP: a.25.1.2 PDB: 1jpr_A 1jqc_A 1xik_A 3uus_E* 1yfd_A 1piy_A 1r65_A 2xof_A* 1biq_B* 1rsv_A 1piz_A 1piu_A 1pim_A 1rsr_A 1biq_A* 1rib_A 1mrr_A 1rnr_A* 1pj0_A 1pj1_A ...
Probab=21.73 E-value=89 Score=27.31 Aligned_cols=37 Identities=16% Similarity=0.224 Sum_probs=27.8
Q ss_pred HHcCCCH-HHHHHHHHhhhhhhhhhHHhhhHHHHHHHHH
Q 041347 106 FRNGGDN-ETAELLERVVYREEITHCAARVRWFRYLCLR 143 (189)
Q Consensus 106 ~~~~GD~-~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~ 143 (189)
|...|-. .++++++ .|.+||.-|+.+|..=|+.+.++
T Consensus 218 l~~~g~m~G~~~~i~-lI~RDE~lH~~~~~~l~~~l~~~ 255 (375)
T 1mxr_A 218 FAERELMEGNAKIIR-LIARDEALHLTGTQHMLNLLRSG 255 (375)
T ss_dssp HHHTTCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhcCCCccHHHHHH-HHHHHHHHHHHHHHHHHHHHhcc
Confidence 3444544 4577888 69999999999999877777653
No 109
>3p14_A L-rhamnose isomerase; TIM barrel; 2.51A {Bacillus halodurans} SCOP: c.1.15.2 PDB: 3uu0_A 3uva_A 3uxi_A
Probab=21.55 E-value=1.7e+02 Score=26.90 Aligned_cols=50 Identities=18% Similarity=0.314 Sum_probs=39.2
Q ss_pred HccCCCcHHHHHHHHcCCCHHHHHHHHHhhhhhhhhhHHhhhHHHHHHHHHcCCCC
Q 041347 93 ARGLNVLPTAISRFRNGGDNETAELLERVVYREEITHCAARVRWFRYLCLRSGYPT 148 (189)
Q Consensus 93 ARGLDv~P~~i~k~~~~GD~~sa~iLe~iI~~DEI~HVa~G~rWF~~lC~~~g~~p 148 (189)
++-|-+.-..+++++..||.-.+ | .+.||..=.-+|.-| .|.|.+.|.+.
T Consensus 355 ~~AlL~~~~~L~~~q~~~D~~~~--l---~~~ee~k~~p~~~vw-~~~c~~~~vp~ 404 (424)
T 3p14_A 355 LFAMLIPHKQLKEWQETGDYTRR--L---AVLEEFKTYPLGAIW-NEYCERMNVPI 404 (424)
T ss_dssp HHHHTSCHHHHHHHHHTTCHHHH--H---HHHHHGGGSSHHHHH-HHHHHHTTCCC
T ss_pred HHHHcCCHHHHHHHHHcCCHHHH--H---HHHHHHhcCChHHHH-HHHHHhcCCCC
Confidence 66666777888899999997542 2 244889999999999 68899999975
No 110
>2bn5_A PSI; nuclear protein, splicing, protein-protein interaction, structure, proline-rich peptide; NMR {Drosophila melanogaster} PDB: 2bn6_A
Probab=21.48 E-value=69 Score=19.70 Aligned_cols=26 Identities=27% Similarity=0.358 Sum_probs=23.1
Q ss_pred cCCCcHHHHHHHHcCCCHHHHHHHHH
Q 041347 95 GLNVLPTAISRFRNGGDNETAELLER 120 (189)
Q Consensus 95 GLDv~P~~i~k~~~~GD~~sa~iLe~ 120 (189)
|.|.+..-++..++.|+.+.|+.+++
T Consensus 1 ~~DYSaQW~eYYrsiG~~~eAeaIe~ 26 (33)
T 2bn5_A 1 GADYSAQWAEYYRSVGKIEEAEAIEK 26 (33)
T ss_dssp CCTTHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CCchHHHHHHHHHHcccHHHHHHHHH
Confidence 67999999999999999998888773
No 111
>1wty_A Hypothetical protein TTHA0048; structural genomics, riken structural genomics/proteomics in RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: a.24.16.2 PDB: 2ywa_A
Probab=21.22 E-value=33 Score=25.02 Aligned_cols=44 Identities=14% Similarity=0.262 Sum_probs=26.1
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHhhcCCCCCCChhHHHhHHHHHH
Q 041347 29 LQNRQAIVHSLAHTESWAIDLSWDIIARFGKQKAMPREFFMDFVKVAQ 76 (189)
Q Consensus 29 ~~~RaalLHaiAHIEl~AIdLA~Dai~RF~~~~~lP~~Fy~Dwl~VA~ 76 (189)
.--+..+++.+ | -|++++||++-+|-...++...-++|-++.|.
T Consensus 21 ~~~~dg~i~~f---e-~t~Elawk~~k~~l~~~g~~~~s~rd~~r~a~ 64 (119)
T 1wty_A 21 EFIRDSAIQRF---E-FTFELAWKTLKTFLELQGLEARSPRAAIRGAF 64 (119)
T ss_dssp HHHHHHHHHHH---H-HHHHHHHHHHHHHHHHHTCCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHH---H-HHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHH
Confidence 34444554443 4 37999999988775323444455566666554
No 112
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=20.24 E-value=57 Score=27.96 Aligned_cols=28 Identities=18% Similarity=0.078 Sum_probs=22.4
Q ss_pred HHHHHHHHhhhhhhhhhHHhhhHHHHHHH
Q 041347 113 ETAELLERVVYREEITHCAARVRWFRYLC 141 (189)
Q Consensus 113 ~sa~iLe~iI~~DEI~HVa~G~rWF~~lC 141 (189)
.++++++ .|.+||.-|+.+|..=|+.+.
T Consensus 213 g~~~~i~-~I~RDE~~H~~f~~~l~~~l~ 240 (311)
T 2o1z_A 213 GLTFSNE-LISRDEGLHTDFNCLIYSLLE 240 (311)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHTCS
T ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 4567888 699999999999887666555
Done!