BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041350
(344 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 137/226 (60%), Gaps = 11/226 (4%)
Query: 124 RYTYKELKKITSKFKHR--LGQGGYGSVFRGKLFNGIPVAVKML--EHLKGNGQEFINEV 179
R++ +EL+ + F ++ LG+GG+G V++G+L +G VAVK L E +G +F EV
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEV 86
Query: 180 ATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKI 239
I H +++RL GFC T R LVY +M NGS+ + + S PL W K ++I
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL--RERPESQPPLDWPKRQRI 144
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS-KDISIVSLTA 298
A G ARG+ YLH C+ +I+H D+K NILLD F+ + DFGLAKL KD + A
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX--XA 202
Query: 299 ARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKNKDPA 344
RGT G+IAPE S G+ S K+DV+ YG+MLLE++ ++ D A
Sbjct: 203 VRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLA 246
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 136/226 (60%), Gaps = 11/226 (4%)
Query: 124 RYTYKELKKITSKF--KHRLGQGGYGSVFRGKLFNGIPVAVKML--EHLKGNGQEFINEV 179
R++ +EL+ + F K+ LG+GG+G V++G+L +G VAVK L E +G +F EV
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 180 ATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKI 239
I H +++RL GFC T R LVY +M NGS+ + + S PL W K ++I
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL--RERPESQPPLDWPKRQRI 136
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS-KDISIVSLTA 298
A G ARG+ YLH C+ +I+H D+K NILLD F+ + DFGLAKL KD + A
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX--XA 194
Query: 299 ARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKNKDPA 344
RG G+IAPE S G+ S K+DV+ YG+MLLE++ ++ D A
Sbjct: 195 VRGXIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLA 238
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 131/235 (55%), Gaps = 32/235 (13%)
Query: 120 VNPTRY---TYKELKKITSKFKHR--------LGQGGYGSVFRGKLFNGIPVAVKML--- 165
V+ TR+ ++ ELK +T+ F R +G+GG+G V++G + N VAVK L
Sbjct: 7 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAM 65
Query: 166 -----EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIF 220
E LK Q+F E+ + + H ++V LLGF S+G LVY +MPNGSL +
Sbjct: 66 VDITTEELK---QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 122
Query: 221 SKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISD 280
+ PLSW KIA G A G+ +LH+ N I H DIK NILLD F KISD
Sbjct: 123 CLDGTP---PLSWHMRCKIAQGAANGINFLHE--NHHI-HRDIKSANILLDEAFTAKISD 176
Query: 281 FGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
FGLA+ K V + GT Y+APE GE++ KSD+YS+G++LLE++
Sbjct: 177 FGLARASEKFAQTVMXSRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEII 228
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 130/235 (55%), Gaps = 32/235 (13%)
Query: 120 VNPTRY---TYKELKKITSKFKHR--------LGQGGYGSVFRGKLFNGIPVAVKML--- 165
V+ TR+ ++ ELK +T+ F R +G+GG+G V++G + N VAVK L
Sbjct: 7 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAM 65
Query: 166 -----EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIF 220
E LK Q+F E+ + + H ++V LLGF S+G LVY +MPNGSL +
Sbjct: 66 VDITTEELK---QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 122
Query: 221 SKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISD 280
+ PLSW KIA G A G+ +LH+ N I H DIK NILLD F KISD
Sbjct: 123 CLDGTP---PLSWHMRCKIAQGAANGINFLHE--NHHI-HRDIKSANILLDEAFTAKISD 176
Query: 281 FGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
FGLA+ K V GT Y+APE GE++ KSD+YS+G++LLE++
Sbjct: 177 FGLARASEKFAQTVMXXRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEII 228
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 130/235 (55%), Gaps = 32/235 (13%)
Query: 120 VNPTRY---TYKELKKITSKFKHR--------LGQGGYGSVFRGKLFNGIPVAVKML--- 165
V+ TR+ ++ ELK +T+ F R +G+GG+G V++G + N VAVK L
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAM 59
Query: 166 -----EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIF 220
E LK Q+F E+ + + H ++V LLGF S+G LVY +MPNGSL +
Sbjct: 60 VDITTEELK---QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 116
Query: 221 SKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISD 280
+ PLSW KIA G A G+ +LH+ N I H DIK NILLD F KISD
Sbjct: 117 CLDGTP---PLSWHMRCKIAQGAANGINFLHE--NHHI-HRDIKSANILLDEAFTAKISD 170
Query: 281 FGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
FGLA+ K V GT Y+APE GE++ KSD+YS+G++LLE++
Sbjct: 171 FGLARASEKFAQXVMXXRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEII 222
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 123/227 (54%), Gaps = 29/227 (12%)
Query: 125 YTYKELKKITSKFKHR--------LGQGGYGSVFRGKLFNGIPVAVKML--------EHL 168
+++ ELK +T+ F R G+GG+G V++G + N VAVK L E L
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 169 KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSH 228
K Q+F E+ + H ++V LLGF S+G LVY + PNGSL + +
Sbjct: 65 K---QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP-- 119
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
PLSW KIA G A G+ +LH+ N I H DIK NILLD F KISDFGLA+
Sbjct: 120 -PLSWHXRCKIAQGAANGINFLHE--NHHI-HRDIKSANILLDEAFTAKISDFGLARASE 175
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
K V + GT Y APE GE++ KSD+YS+G++LLE++
Sbjct: 176 KFAQXVXXSRIVGTTAYXAPEALR---GEITPKSDIYSFGVVLLEII 219
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 123/218 (56%), Gaps = 10/218 (4%)
Query: 124 RYTYKELKKITSKFKHR--LGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVAT 181
R +L++ T+ F H+ +G G +G V++G L +G VA+K G E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 182 -IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIA 240
+ H H+V L+GFC E L+Y++M NG+L++ ++ + +SWE+ +I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT--MSMSWEQRLEIC 145
Query: 241 FGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR 300
G ARG+ YLH + I+H D+K NILLD NF PKI+DFG++K ++ +
Sbjct: 146 IGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVK 202
Query: 301 GTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
GT GYI PE F + G ++ KSDVYS+G++L E++ R
Sbjct: 203 GTLGYIDPEYFIK--GRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 123/218 (56%), Gaps = 10/218 (4%)
Query: 124 RYTYKELKKITSKFKHR--LGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVAT 181
R +L++ T+ F H+ +G G +G V++G L +G VA+K G E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 182 -IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIA 240
+ H H+V L+GFC E L+Y++M NG+L++ ++ + +SWE+ +I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT--MSMSWEQRLEIC 145
Query: 241 FGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR 300
G ARG+ YLH + I+H D+K NILLD NF PKI+DFG++K ++ +
Sbjct: 146 IGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVK 202
Query: 301 GTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
GT GYI PE F + G ++ KSDVYS+G++L E++ R
Sbjct: 203 GTLGYIDPEYFIK--GRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 121/214 (56%), Gaps = 15/214 (7%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQ---EFINEVATIGRIHHFHIVRL 193
K ++G G +G+V R + ++G VAVK+L + + EF+ EVA + R+ H +IV
Sbjct: 41 IKEKIGAGSFGTVHRAE-WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
+G ++ ++V E++ GSL + + S + L + +A+ VA+G+ YLH
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHK---SGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
N I+H ++K N+L+D + K+ DFGL++L K + +S +A GT ++APE+
Sbjct: 157 -NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRD 213
Query: 314 NFGEVSYKSDVYSYGMMLLEMVGCRK---NKDPA 344
+ KSDVYS+G++L E+ ++ N +PA
Sbjct: 214 E--PSNEKSDVYSFGVILWELATLQQPWGNLNPA 245
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 118/214 (55%), Gaps = 15/214 (7%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQ---EFINEVATIGRIHHFHIVRL 193
K ++G G +G+V R + ++G VAVK+L + + EF+ EVA + R+ H +IV
Sbjct: 41 IKEKIGAGSFGTVHRAE-WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
+G ++ ++V E++ GSL + + S + L + +A+ VA+G+ YLH
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHK---SGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
N I+H D+K N+L+D + K+ DFGL++L K + A GT ++APE+
Sbjct: 157 -NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRD 213
Query: 314 NFGEVSYKSDVYSYGMMLLEMVGCRK---NKDPA 344
+ KSDVYS+G++L E+ ++ N +PA
Sbjct: 214 E--PSNEKSDVYSFGVILWELATLQQPWGNLNPA 245
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 115/222 (51%), Gaps = 20/222 (9%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHLKGNGQ--E 174
P + + LK+ K LG G +G+V++G IPVA+K+L G E
Sbjct: 27 PNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE 86
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLSW 233
F++E + + H H+VRLLG C T + LV + MP+G L +++ K N S L+W
Sbjct: 87 FMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW 145
Query: 234 EKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI 293
+A+G+ YL + +R++H D+ N+L+ KI+DFGLA+L D
Sbjct: 146 ------CVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 196
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ + ++A E ++ + +++SDV+SYG+ + E++
Sbjct: 197 YNADGGKMPIKWMALECI--HYRKFTHQSDVWSYGVTIWELM 236
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 115/222 (51%), Gaps = 20/222 (9%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHLKGNGQ--E 174
P + + LK+ K LG G +G+V++G IPVA+K+L G E
Sbjct: 4 PNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE 63
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLSW 233
F++E + + H H+VRLLG C T + LV + MP+G L +++ K N S L+W
Sbjct: 64 FMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW 122
Query: 234 EKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI 293
+A+G+ YL + +R++H D+ N+L+ KI+DFGLA+L D
Sbjct: 123 ------CVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 173
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ + ++A E ++ + +++SDV+SYG+ + E++
Sbjct: 174 YNADGGKMPIKWMALECI--HYRKFTHQSDVWSYGVTIWELM 213
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
F +G G +G V G N VA+K + + ++FI E + ++ H +V+L G
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
C E LV+EFM +G L ++ ++ + E L + V G+ YL + C
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGL-----FAAETLLGMCLDVCEGMAYLEEAC-- 123
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
++H D+ N L+ N K+SDFG+ + D S T + + +PE+FS F
Sbjct: 124 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFS--FS 179
Query: 317 EVSYKSDVYSYGMMLLEM 334
S KSDV+S+G+++ E+
Sbjct: 180 RYSSKSDVWSFGVLMWEV 197
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
F +G G +G V G N VA+K + + ++FI E + ++ H +V+L G
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
C E LV+EFM +G L ++ ++ + E L + V G+ YL + C
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGL-----FAAETLLGMCLDVCEGMAYLEEAC-- 121
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
++H D+ N L+ N K+SDFG+ + D S T + + +PE+FS F
Sbjct: 122 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFS--FS 177
Query: 317 EVSYKSDVYSYGMMLLEM 334
S KSDV+S+G+++ E+
Sbjct: 178 RYSSKSDVWSFGVLMWEV 195
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
F +G G +G V G N VA+K + + ++FI E + ++ H +V+L G
Sbjct: 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
C E LV+EFM +G L ++ ++ + E L + V G+ YL + C
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRGL-----FAAETLLGMCLDVCEGMAYLEEAC-- 126
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
++H D+ N L+ N K+SDFG+ + D S T + + +PE+FS F
Sbjct: 127 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFS--FS 182
Query: 317 EVSYKSDVYSYGMMLLEM 334
S KSDV+S+G+++ E+
Sbjct: 183 RYSSKSDVWSFGVLMWEV 200
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
F +G G +G V G N VA+K ++ + +FI E + ++ H +V+L G
Sbjct: 31 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
C E LV+EFM +G L ++ ++ + E L + V G+ YL + C
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGL-----FAAETLLGMCLDVCEGMAYLEEAC-- 143
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
++H D+ N L+ N K+SDFG+ + D S T + + +PE+FS F
Sbjct: 144 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFS--FS 199
Query: 317 EVSYKSDVYSYGMMLLEM 334
S KSDV+S+G+++ E+
Sbjct: 200 RYSSKSDVWSFGVLMWEV 217
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 115/220 (52%), Gaps = 13/220 (5%)
Query: 119 TVNPTRYTYK--ELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEF 175
++P+ Y E+++ KH+LG G YG V+ G + VAVK L+ +EF
Sbjct: 2 AMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 176 INEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
+ E A + I H ++V+LLG C+ ++ EFM G+L ++ + + +S
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVV 117
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS 295
L +A ++ +EYL + + +H D+ N L+ N K++DFGL++L + D + +
Sbjct: 118 LLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTA 173
Query: 296 LTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
A+ + APE + N + S KSDV+++G++L E+
Sbjct: 174 HAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 211
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 111/212 (52%), Gaps = 11/212 (5%)
Query: 125 YTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINEVATIG 183
Y E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 184 RIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGV 243
I H ++V+LLG C+ ++ EFM G+L ++ + + +S L +A +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQI 120
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTA 303
+ +EYL + + +H D+ N L+ N K++DFGL++L + D + + A+
Sbjct: 121 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPI 176
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ APE + N + S KSDV+++G++L E+
Sbjct: 177 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 206
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 111/212 (52%), Gaps = 11/212 (5%)
Query: 125 YTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINEVATIG 183
Y E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 184 RIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGV 243
I H ++V+LLG C+ ++ EFM G+L ++ + + +S L +A +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQI 120
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTA 303
+ +EYL + + +H D+ N L+ N K++DFGL++L + D + + A+
Sbjct: 121 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPI 176
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ APE S + + S KSDV+++G++L E+
Sbjct: 177 KWTAPE--SLAYNKFSIKSDVWAFGVLLWEIA 206
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 111/212 (52%), Gaps = 11/212 (5%)
Query: 125 YTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINEVATIG 183
Y E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 184 RIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGV 243
I H ++V+LLG C+ ++ EFM G+L ++ + + +S L +A +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQI 120
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTA 303
+ +EYL + + +H D+ N L+ N K++DFGL++L + D + + A+
Sbjct: 121 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPI 176
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ APE + N + S KSDV+++G++L E+
Sbjct: 177 KWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 206
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 111/212 (52%), Gaps = 11/212 (5%)
Query: 125 YTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINEVATIG 183
Y E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 184 RIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGV 243
I H ++V+LLG C+ ++ EFM G+L ++ + + +S L +A +
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQI 120
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTA 303
+ +EYL + + +H D+ N L+ N K++DFGL++L + D + + A+
Sbjct: 121 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPI 176
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ APE S + + S KSDV+++G++L E+
Sbjct: 177 KWTAPE--SLAYNKFSIKSDVWAFGVLLWEIA 206
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 11/208 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINEVATIGRIHH 187
E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E A + I H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 188 FHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
++V+LLG C+ ++ EFM G+L ++ + + +S L +A ++ +
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQISSAM 122
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIA 307
EYL + + +H D+ N L+ N K++DFGL++L + D + + A+ + A
Sbjct: 123 EYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TFTAHAGAKFPIKWTA 178
Query: 308 PELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PE S + + S KSDV+++G++L E+
Sbjct: 179 PE--SLAYNKFSIKSDVWAFGVLLWEIA 204
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 11/208 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINEVATIGRIHH 187
E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E A + I H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 188 FHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
++V+LLG C+ ++ EFM G+L ++ + + +S L +A ++ +
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQISSAM 122
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIA 307
EYL + + +H D+ N L+ N K++DFGL++L + D + + A+ + A
Sbjct: 123 EYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TXTAHAGAKFPIKWTA 178
Query: 308 PELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PE S + + S KSDV+++G++L E+
Sbjct: 179 PE--SLAYNKFSIKSDVWAFGVLLWEIA 204
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 10/207 (4%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + K RLG G +G V+ G N VAVK L+ + Q F+ E + + H
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 68
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+VRL + ++ E+M GSL F+ S P KL + +A G+
Sbjct: 69 KLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP----KLIDFSAQIAEGMA 124
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + + +H D++ N+L+ + KI+DFGLA++ +D + A+ + AP
Sbjct: 125 YIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAP 180
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E NFG + KSDV+S+G++L E+V
Sbjct: 181 EAI--NFGCFTIKSDVWSFGILLYEIV 205
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
F +G G +G V G N VA+K + + ++FI E + ++ H +V+L G
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
C E LV EFM +G L ++ ++ + E L + V G+ YL + C
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRGL-----FAAETLLGMCLDVCEGMAYLEEAC-- 124
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
++H D+ N L+ N K+SDFG+ + D S T + + +PE+FS F
Sbjct: 125 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFS--FS 180
Query: 317 EVSYKSDVYSYGMMLLEM 334
S KSDV+S+G+++ E+
Sbjct: 181 RYSSKSDVWSFGVLMWEV 198
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 116/220 (52%), Gaps = 13/220 (5%)
Query: 119 TVNPTRYTYK--ELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEF 175
+++P+ Y E+++ KH+LG G YG V+ G + VAVK L+ +EF
Sbjct: 2 SMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 176 INEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
+ E A + I H ++V+LLG C+ ++ EFM G+L ++ + + ++
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL----RECNRQEVNAVV 117
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS 295
L +A ++ +EYL + + +H D+ N L+ N K++DFGL++L + D + +
Sbjct: 118 LLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTA 173
Query: 296 LTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
A+ + APE S + + S KSDV+++G++L E+
Sbjct: 174 HAGAKFPIKWTAPE--SLAYNKFSIKSDVWAFGVLLWEIA 211
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 116/220 (52%), Gaps = 13/220 (5%)
Query: 119 TVNPTRYTYK--ELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEF 175
+++P+ Y E+++ KH+LG G YG V+ G + VAVK L+ +EF
Sbjct: 2 SMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 176 INEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
+ E A + I H ++V+LLG C+ ++ EFM G+L ++ + + ++
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVNAVV 117
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS 295
L +A ++ +EYL + + +H D+ N L+ N K++DFGL++L + D + +
Sbjct: 118 LLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTA 173
Query: 296 LTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
A+ + APE S + + S KSDV+++G++L E+
Sbjct: 174 HAGAKFPIKWTAPE--SLAYNKFSIKSDVWAFGVLLWEIA 211
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 111/212 (52%), Gaps = 11/212 (5%)
Query: 125 YTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINEVATIG 183
Y E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E A +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 65
Query: 184 RIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGV 243
I H ++V+LLG C+ ++ EFM G+L ++ + + ++ L +A +
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVNAVVLLYMATQI 121
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTA 303
+ +EYL + + +H D+ N L+ N K++DFGL++L + D + + A+
Sbjct: 122 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAPAGAKFPI 177
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ APE S + + S KSDV+++G++L E+
Sbjct: 178 KWTAPE--SLAYNKFSIKSDVWAFGVLLWEIA 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 114/216 (52%), Gaps = 12/216 (5%)
Query: 120 VNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINE 178
V+P Y E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E
Sbjct: 1 VSPN-YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 59
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKK 238
A + I H ++V+LLG C+ ++ EFM G+L ++ + + ++ L
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVNAVVLLY 115
Query: 239 IAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTA 298
+A ++ +EYL + + +H D+ N L+ N K++DFGL++L + D + +
Sbjct: 116 MATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAG 171
Query: 299 ARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
A+ + APE S + + S KSDV+++G++L E+
Sbjct: 172 AKFPIKWTAPE--SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 111/212 (52%), Gaps = 11/212 (5%)
Query: 125 YTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINEVATIG 183
Y E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E A +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 184 RIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGV 243
I H ++V+LLG C+ ++ EFM G+L ++ + + ++ L +A +
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVNAVVLLYMATQI 122
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTA 303
+ +EYL + + +H D+ N L+ N K++DFGL++L + D + + A+
Sbjct: 123 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAPAGAKFPI 178
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ APE S + + S KSDV+++G++L E+
Sbjct: 179 KWTAPE--SLAYNKFSIKSDVWAFGVLLWEIA 208
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 121/232 (52%), Gaps = 26/232 (11%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNG---IPVAVKMLEHL--KGNGQEF 175
NP Y L KF+ +G+G +G V + ++ + A+K ++ K + ++F
Sbjct: 3 NPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF 62
Query: 176 INEVATIGRI-HHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFI-----------FSKT 223
E+ + ++ HH +I+ LLG C L E+ P+G+L F+ F+
Sbjct: 63 AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 122
Query: 224 NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL 283
NS++ LS ++L A VARG++YL Q ++ +H D+ NIL+ N+ KI+DFGL
Sbjct: 123 NSTAS-TLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL 178
Query: 284 AKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++ +++ V T R ++A E S N+ + SDV+SYG++L E+V
Sbjct: 179 SR--GQEV-YVKKTMGRLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIV 225
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 114/216 (52%), Gaps = 12/216 (5%)
Query: 120 VNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINE 178
V+P Y E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E
Sbjct: 1 VSPN-YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 59
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKK 238
A + I H ++V+LLG C+ ++ EFM G+L ++ + + ++ L
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVNAVVLLY 115
Query: 239 IAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTA 298
+A ++ +EYL + + +H D+ N L+ N K++DFGL++L + D + +
Sbjct: 116 MATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAG 171
Query: 299 ARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
A+ + APE S + + S KSDV+++G++L E+
Sbjct: 172 AKFPIKWTAPE--SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 111/212 (52%), Gaps = 11/212 (5%)
Query: 125 YTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINEVATIG 183
Y E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E A +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 65
Query: 184 RIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGV 243
I H ++V+LLG C+ ++ EFM G+L ++ + + ++ L +A +
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL----RECNRQEVNAVVLLYMATQI 121
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTA 303
+ +EYL + + +H D+ N L+ N K++DFGL++L + D + + A+
Sbjct: 122 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TXTAHAGAKFPI 177
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ APE S + + S KSDV+++G++L E+
Sbjct: 178 KWTAPE--SLAYNKFSIKSDVWAFGVLLWEIA 207
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 115/220 (52%), Gaps = 13/220 (5%)
Query: 119 TVNPTRYTYK--ELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEF 175
++P+ Y E+++ KH+LG G YG V+ G + VAVK L+ +EF
Sbjct: 2 AMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 176 INEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
+ E A + I H ++V+LLG C+ ++ EFM G+L ++ + + ++
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVNAVV 117
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS 295
L +A ++ +EYL + + +H D+ N L+ N K++DFGL++L + D + +
Sbjct: 118 LLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TXTA 173
Query: 296 LTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
A+ + APE S + + S KSDV+++G++L E+
Sbjct: 174 HAGAKFPIKWTAPE--SLAYNKFSIKSDVWAFGVLLWEIA 211
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 115/220 (52%), Gaps = 13/220 (5%)
Query: 119 TVNPTRYTYK--ELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEF 175
++P+ Y E+++ KH+LG G YG V+ G + VAVK L+ +EF
Sbjct: 2 AMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 176 INEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
+ E A + I H ++V+LLG C+ ++ EFM G+L ++ + + ++
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVNAVV 117
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS 295
L +A ++ +EYL + + +H D+ N L+ N K++DFGL++L + D + +
Sbjct: 118 LLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTA 173
Query: 296 LTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
A+ + APE + N + S KSDV+++G++L E+
Sbjct: 174 HAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 211
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 121/232 (52%), Gaps = 26/232 (11%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNG---IPVAVKMLEHL--KGNGQEF 175
NP Y L KF+ +G+G +G V + ++ + A+K ++ K + ++F
Sbjct: 13 NPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF 72
Query: 176 INEVATIGRI-HHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFI-----------FSKT 223
E+ + ++ HH +I+ LLG C L E+ P+G+L F+ F+
Sbjct: 73 AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 132
Query: 224 NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL 283
NS++ LS ++L A VARG++YL Q ++ +H D+ NIL+ N+ KI+DFGL
Sbjct: 133 NSTAS-TLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL 188
Query: 284 AKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++ +++ V T R ++A E S N+ + SDV+SYG++L E+V
Sbjct: 189 SR--GQEV-YVKKTMGRLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIV 235
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 111/212 (52%), Gaps = 11/212 (5%)
Query: 125 YTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINEVATIG 183
Y E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E A +
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 68
Query: 184 RIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGV 243
I H ++V+LLG C+ ++ EFM G+L ++ + + ++ L +A +
Sbjct: 69 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVNAVVLLYMATQI 124
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTA 303
+ +EYL + + +H D+ N L+ N K++DFGL++L + D + + A+
Sbjct: 125 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPI 180
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ APE S + + S KSDV+++G++L E+
Sbjct: 181 KWTAPE--SLAYNKFSIKSDVWAFGVLLWEIA 210
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 111/212 (52%), Gaps = 11/212 (5%)
Query: 125 YTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINEVATIG 183
Y E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E A +
Sbjct: 18 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 77
Query: 184 RIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGV 243
I H ++V+LLG C+ ++ EFM G+L ++ + + ++ L +A +
Sbjct: 78 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVNAVVLLYMATQI 133
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTA 303
+ +EYL + + +H D+ N L+ N K++DFGL++L + D + + A+
Sbjct: 134 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPI 189
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ APE S + + S KSDV+++G++L E+
Sbjct: 190 KWTAPE--SLAYNKFSIKSDVWAFGVLLWEIA 219
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + T K RLG G +G V+ G VAVK L+ + F+ E + ++ H
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 76
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+VRL ++ ++ E+M NGSL F+ KT S L+ KL +A +A G+
Sbjct: 77 RLVRLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIK--LTINKLLDMAAQIAEGMA 131
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
++ + + +H D++ NIL+ KI+DFGLA+L +D + A+ + AP
Sbjct: 132 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAP 187
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E N+G + KSDV+S+G++L E+V
Sbjct: 188 EAI--NYGTFTIKSDVWSFGILLTEIV 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 111/212 (52%), Gaps = 11/212 (5%)
Query: 125 YTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINEVATIG 183
Y E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E A +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 184 RIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGV 243
I H ++V+LLG C+ ++ EFM G+L ++ + + ++ L +A +
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVNAVVLLYMATQI 122
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTA 303
+ +EYL + + +H D+ N L+ N K++DFGL++L + D + + A+
Sbjct: 123 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPI 178
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ APE S + + S KSDV+++G++L E+
Sbjct: 179 KWTAPE--SLAYNKFSIKSDVWAFGVLLWEIA 208
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 111/212 (52%), Gaps = 11/212 (5%)
Query: 125 YTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINEVATIG 183
Y E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E A +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 184 RIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGV 243
I H ++V+LLG C+ ++ EFM G+L ++ + + ++ L +A +
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVNAVVLLYMATQI 122
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTA 303
+ +EYL + + +H D+ N L+ N K++DFGL++L + D + + A+
Sbjct: 123 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPI 178
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ APE S + + S KSDV+++G++L E+
Sbjct: 179 KWTAPE--SLAYNKFSIKSDVWAFGVLLWEIA 208
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + T K RLG G +G V+ G VAVK L+ + F+ E + ++ H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+VRL ++ ++ E+M NGSL F+ KT S L+ KL +A +A G+
Sbjct: 75 RLVRLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIK--LTINKLLDMAAQIAEGMA 129
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
++ + + +H D++ NIL+ KI+DFGLA+L +D + A+ + AP
Sbjct: 130 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAP 185
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E N+G + KSDV+S+G++L E+V
Sbjct: 186 EAI--NYGTFTIKSDVWSFGILLTEIV 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + T K RLG G +G V+ G VAVK L+ + F+ E + ++ H
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 69
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+VRL ++ ++ E+M NGSL F+ + S L+ KL +A +A G+
Sbjct: 70 RLVRLYAVVTQEP-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMA 124
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
++ + + +H D++ NIL+ KI+DFGLA+L +D + A+ + AP
Sbjct: 125 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAP 180
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E N+G + KSDV+S+G++L E+V
Sbjct: 181 EAI--NYGTFTIKSDVWSFGILLTEIV 205
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + T K RLG G +G V+ G VAVK L+ + F+ E + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+VRL ++ ++ E+M NGSL F+ + S L+ KL +A +A G+
Sbjct: 69 RLVRLYAVVTQEP-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
++ + + +H D++ NIL+ KI+DFGLA+L +D + A+ + AP
Sbjct: 124 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAP 179
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E N+G + KSDV+S+G++L E+V
Sbjct: 180 EAI--NYGTFTIKSDVWSFGILLTEIV 204
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINEVATIGRIHH 187
E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E A + I H
Sbjct: 28 EMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 87
Query: 188 FHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
++V+LLG C+ +V E+MP G+L ++ + ++ L +A ++ +
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL----RECNREEVTAVVLLYMATQISSAM 143
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIA 307
EYL + + +H D+ N L+ N K++DFGL++L + D + + A+ + A
Sbjct: 144 EYLEK---KNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTA 199
Query: 308 PELFSRNFGEVSYKSDVYSYGMMLLEM 334
PE + N S KSDV+++G++L E+
Sbjct: 200 PESLAYN--TFSIKSDVWAFGVLLWEI 224
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + T K RLG G +G V+ G VAVK L+ + F+ E + ++ H
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 70
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+VRL ++ ++ E+M NGSL F+ + S L+ KL +A +A G+
Sbjct: 71 RLVRLYAVVTQEP-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMA 125
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
++ + + +H D++ NIL+ KI+DFGLA+L +D + A+ + AP
Sbjct: 126 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAP 181
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E N+G + KSDV+S+G++L E+V
Sbjct: 182 EAI--NYGTFTIKSDVWSFGILLTEIV 206
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + T K RLG G +G V+ G VAVK L+ + F+ E + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+VRL ++ ++ E+M NGSL F+ + S L+ KL +A +A G+
Sbjct: 69 RLVRLYAVVTQEP-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
++ + + +H D++ NIL+ KI+DFGLA+L +D + A+ + AP
Sbjct: 124 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAP 179
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E N+G + KSDV+S+G++L E+V
Sbjct: 180 EAI--NYGTFTIKSDVWSFGILLTEIV 204
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + T K RLG G +G V+ G VAVK L+ + F+ E + ++ H
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 73
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+VRL ++ ++ E+M NGSL F+ + S L+ KL +A +A G+
Sbjct: 74 RLVRLYAVVTQEP-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMA 128
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
++ + + +H D++ NIL+ KI+DFGLA+L +D + A+ + AP
Sbjct: 129 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAP 184
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E N+G + KSDV+S+G++L E+V
Sbjct: 185 EAI--NYGTFTIKSDVWSFGILLTEIV 209
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + T K RLG G +G V+ G VAVK L+ + F+ E + ++ H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+VRL ++ ++ E+M NGSL F+ + S L+ KL +A +A G+
Sbjct: 75 RLVRLYAVVTQEP-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMA 129
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
++ + + +H D++ NIL+ KI+DFGLA+L +D + A+ + AP
Sbjct: 130 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAP 185
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E N+G + KSDV+S+G++L E+V
Sbjct: 186 EAI--NYGTFTIKSDVWSFGILLTEIV 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + T K RLG G +G V+ G VAVK L+ + F+ E + ++ H
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 77
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+VRL ++ ++ E+M NGSL F+ KT S L+ KL +A +A G+
Sbjct: 78 RLVRLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIK--LTINKLLDMAAQIAEGMA 132
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
++ + + +H D++ NIL+ KI+DFGLA+L +D + A+ + AP
Sbjct: 133 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAP 188
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E N+G + KSDV+S+G++L E+V
Sbjct: 189 EAI--NYGTFTIKSDVWSFGILLTEIV 213
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + T K RLG G +G V+ G VAVK L+ + F+ E + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+VRL ++ ++ E+M NGSL F+ + S L+ KL +A +A G+
Sbjct: 69 RLVRLYAVVTQEP-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
++ + + +H D++ NIL+ KI+DFGLA+L +D + A+ + AP
Sbjct: 124 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAP 179
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E N+G + KSDV+S+G++L E+V
Sbjct: 180 EAI--NYGTFTIKSDVWSFGILLTEIV 204
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + T K RLG G +G V+ G VAVK L+ + F+ E + ++ H
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 63
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+VRL ++ ++ E+M NGSL F+ + S L+ KL +A +A G+
Sbjct: 64 RLVRLYAVVTQEP-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMA 118
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
++ + + +H D++ NIL+ KI+DFGLA+L +D + A+ + AP
Sbjct: 119 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAP 174
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E N+G + KSDV+S+G++L E+V
Sbjct: 175 EAI--NYGTFTIKSDVWSFGILLTEIV 199
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + T K RLG G +G V+ G VAVK L+ + F+ E + ++ H
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 78
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+VRL ++ ++ E+M NGSL F+ KT S L+ KL +A +A G+
Sbjct: 79 RLVRLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIK--LTINKLLDMAAQIAEGMA 133
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
++ + + +H D++ NIL+ KI+DFGLA+L +D + A+ + AP
Sbjct: 134 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAP 189
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E N+G + KSDV+S+G++L E+V
Sbjct: 190 EAI--NYGTFTIKSDVWSFGILLTEIV 214
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 110/208 (52%), Gaps = 11/208 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINEVATIGRIHH 187
E+++ KH+LG G +G V+ G + VAVK L+ +EF+ E A + I H
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 188 FHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
++V+LLG C+ ++ EFM G+L ++ + + +S L +A ++ +
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQISSAM 122
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIA 307
EYL + + +H D+ N L+ N K++DFGL++L + D + + A+ + A
Sbjct: 123 EYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TXTAHAGAKFPIKWTA 178
Query: 308 PELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PE + N + S KSDV+++G++L E+
Sbjct: 179 PESLAYN--KFSIKSDVWAFGVLLWEIA 204
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 110/211 (52%), Gaps = 11/211 (5%)
Query: 127 YKELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAV-KMLEHLKGNGQEFINEVATIGRI 185
Y E++ R+G G +G+V++GK + V + K+++ Q F NEVA + +
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKT 89
Query: 186 HHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVAR 245
H +I+ +G+ ++ A+V ++ SL K + + +L IA A+
Sbjct: 90 RHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHVQETK-----FQMFQLIDIARQTAQ 143
Query: 246 GVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGY 305
G++YLH + I+H D+K +NI L KI DFGLA + S+ + G+ +
Sbjct: 144 GMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLW 200
Query: 306 IAPELFS-RNFGEVSYKSDVYSYGMMLLEMV 335
+APE+ ++ S++SDVYSYG++L E++
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELM 231
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + T K RLG G G V+ G VAVK L+ + F+ E + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+VRL ++ ++ E+M NGSL F+ KT S L+ KL +A +A G+
Sbjct: 69 RLVRLYAVVTQEP-IYIITEYMENGSLVDFL--KTPSGIK--LTINKLLDMAAQIAEGMA 123
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
++ + + +H D++ NIL+ KI+DFGLA+L +D + A+ + AP
Sbjct: 124 FIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDAEXTAREGAKFPIKWTAP 179
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E N+G + KSDV+S+G++L E+V
Sbjct: 180 EAI--NYGTFTIKSDVWSFGILLTEIV 204
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 10/207 (4%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + K +LG G +G V+ G N VAVK L+ + Q F+ E + + H
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 67
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+VRL ++ ++ EFM GSL F+ S P KL + +A G+
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP----KLIDFSAQIAEGMA 123
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + + +H D++ N+L+ + KI+DFGLA++ +D + A+ + AP
Sbjct: 124 YIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAP 179
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E NFG + KS+V+S+G++L E+V
Sbjct: 180 EAI--NFGCFTIKSNVWSFGILLYEIV 204
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
F +G G +G V G N VA+K + + ++FI E + ++ H +V+L G
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
C E LV+EFM +G L ++ ++ + E L + V G+ YL +
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGL-----FAAETLLGMCLDVCEGMAYLEEA--- 122
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
++H D+ N L+ N K+SDFG+ + D S T + + +PE+FS F
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFS--FS 179
Query: 317 EVSYKSDVYSYGMMLLEM 334
S KSDV+S+G+++ E+
Sbjct: 180 RYSSKSDVWSFGVLMWEV 197
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 114/217 (52%), Gaps = 12/217 (5%)
Query: 120 VNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINE 178
V+P Y E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E
Sbjct: 208 VSPN-YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 266
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKK 238
A + I H ++V+LLG C+ ++ EFM G+L ++ + + +S L
Sbjct: 267 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLY 322
Query: 239 IAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTA 298
+A ++ +EYL + + +H ++ N L+ N K++DFGL++L + D + +
Sbjct: 323 MATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAG 378
Query: 299 ARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
A+ + APE + N + S KSDV+++G++L E+
Sbjct: 379 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 413
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 141 LGQGGYGSVFRGKLFNG-----IPVAVKMLE--HLKGNGQEFINEVATIGRIHHFHIVRL 193
+G G +G V++G L +PVA+K L+ + + +F+ E +G+ H +I+RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
G S+ ++ E+M NG+L+KF+ K S +L + G+A G++YL
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGE-----FSVLQLVGMLRGIAAGMKYL--- 163
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTA-ARGTAGYIAPELFS 312
N +H D+ NIL++ N K+SDFGL+++ D T+ + + APE S
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 313 RNFGEVSYKSDVYSYGMMLLEMV 335
+ + + SDV+S+G+++ E++
Sbjct: 224 --YRKFTSASDVWSFGIVMWEVM 244
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 121/232 (52%), Gaps = 26/232 (11%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNG---IPVAVKMLEHL--KGNGQEF 175
NP Y L KF+ +G+G +G V + ++ + A+K ++ K + ++F
Sbjct: 10 NPDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF 69
Query: 176 INEVATIGRI-HHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFI-----------FSKT 223
E+ + ++ HH +I+ LLG C L E+ P+G+L F+ F+
Sbjct: 70 AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 129
Query: 224 NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL 283
NS++ LS ++L A VARG++YL Q ++ +H ++ NIL+ N+ KI+DFGL
Sbjct: 130 NSTAS-TLSSQQLLHFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGL 185
Query: 284 AKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++ +++ V T R ++A E S N+ + SDV+SYG++L E+V
Sbjct: 186 SR--GQEV-YVKKTMGRLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIV 232
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
Query: 115 EDYRTVNPTRYTYKELKKITSKFKHR----LGQGGYGSVFRGKLFN-----GIPVAVKML 165
E ++P+ K L +I + + R LG G +G+V +G IPV +K++
Sbjct: 9 ESIEPLDPSEKANKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI 68
Query: 166 EHLKGNG--QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKT 223
E G Q + + IG + H HIVRLLG C G+ LV +++P GSL +
Sbjct: 69 EDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHV---- 123
Query: 224 NSSSHR-PLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
HR L + L +A+G+ YL + ++H ++ N+LL Q +++DFG
Sbjct: 124 --RQHRGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFG 178
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+A L D + + A+ ++A L S +FG+ +++SDV+SYG+ + E++
Sbjct: 179 VADLLPPDDKQLLYSEAKTPIKWMA--LESIHFGKYTHQSDVWSYGVTVWELM 229
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + T K RLG G +G V+ G VAVK L+ + F+ E + ++ H
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 64
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+VRL ++ ++ E+M NGSL F+ + S L+ KL +A +A G+
Sbjct: 65 RLVRLYAVVTQEP-IYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMA 119
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
++ + + +H +++ NIL+ KI+DFGLA+L +D + A+ + AP
Sbjct: 120 FIEE---RNYIHRNLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAP 175
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E N+G + KSDV+S+G++L E+V
Sbjct: 176 EAI--NYGTFTIKSDVWSFGILLTEIV 200
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 114/209 (54%), Gaps = 16/209 (7%)
Query: 134 TSKFKH--RLGQGGYGSVFRG-KLFNGIPVAVK--MLEHLKGNGQEFINEVATIGRIHHF 188
+S+FK +LG G Y +V++G G+ VA+K L+ +G I E++ + + H
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+IVRL + LV+EFM N L+K++ S+T ++ R L +K + + +G+
Sbjct: 64 NIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
+ H+ +ILH D+KP N+L++ Q K+ DFGLA+ I + + ++ T Y AP
Sbjct: 123 FCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG--IPVNTFSSEVVTLWYRAP 177
Query: 309 ELFSRNFGEVSYKS--DVYSYGMMLLEMV 335
++ G +Y + D++S G +L EM+
Sbjct: 178 DVL---MGSRTYSTSIDIWSCGCILAEMI 203
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 114/217 (52%), Gaps = 12/217 (5%)
Query: 120 VNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINE 178
V+P Y E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E
Sbjct: 205 VSPN-YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 263
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKK 238
A + I H ++V+LLG C+ ++ EFM G+L ++ + + ++ L
Sbjct: 264 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVNAVVLLY 319
Query: 239 IAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTA 298
+A ++ +EYL + + +H ++ N L+ N K++DFGL++L + D + +
Sbjct: 320 MATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAG 375
Query: 299 ARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
A+ + APE + N + S KSDV+++G++L E+
Sbjct: 376 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 410
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 114/217 (52%), Gaps = 12/217 (5%)
Query: 120 VNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINE 178
V+P Y E+++ KH+LG G YG V+ G + VAVK L+ +EF+ E
Sbjct: 247 VSPN-YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 305
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKK 238
A + I H ++V+LLG C+ ++ EFM G+L ++ + + ++ L
Sbjct: 306 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVNAVVLLY 361
Query: 239 IAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTA 298
+A ++ +EYL + + +H ++ N L+ N K++DFGL++L + D + +
Sbjct: 362 MATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAHAG 417
Query: 299 ARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
A+ + APE + N + S KSDV+++G++L E+
Sbjct: 418 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIA 452
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 107/201 (53%), Gaps = 15/201 (7%)
Query: 139 HRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQE---FINEVATIGRIHHFHIVRLLG 195
R+G G +G+V++GK VAVKML Q+ F NEV + + H +I+ +G
Sbjct: 18 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ ++ + A+V ++ SL + + S +KL IA ARG++YLH
Sbjct: 76 YSTK-PQLAIVTQWCEGSSLYHHLHA-----SETKFEMKKLIDIARQTARGMDYLHA--- 126
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS-RN 314
+ I+H D+K +NI L + KI DFGLA + S+ G+ ++APE+ ++
Sbjct: 127 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
S++SDVY++G++L E++
Sbjct: 187 SNPYSFQSDVYAFGIVLYELM 207
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 63
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ +T P +L +A +A G+
Sbjct: 64 KLVQLYAVVSEEP-IXIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMA 118
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 119 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAP 174
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 175 E--AALYGRFTIKSDVWSFGILLTELT 199
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 110/207 (53%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + K + +LG G +G V+ VAVK ++ + + F+ E + + H
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 243
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L ++ ++ EFM GSL F+ K++ S +PL KL + +A G+
Sbjct: 244 KLVKLHAVVTKEPI-YIITEFMAKGSLLDFL--KSDEGSKQPLP--KLIDFSAQIAEGMA 298
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
++ Q + +H D++ NIL+ + KI+DFGLA++ +D + A+ + AP
Sbjct: 299 FIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAP 354
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E NFG + KSDV+S+G++L+E+V
Sbjct: 355 EAI--NFGSFTIKSDVWSFGILLMEIV 379
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 110/207 (53%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + K + +LG G +G V+ VAVK ++ + + F+ E + + H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 70
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L ++ ++ EFM GSL F+ K++ S +PL KL + +A G+
Sbjct: 71 KLVKLHAVVTKEPIY-IITEFMAKGSLLDFL--KSDEGSKQPLP--KLIDFSAQIAEGMA 125
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
++ Q + +H D++ NIL+ + KI+DFGLA++ +D + A+ + AP
Sbjct: 126 FIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAP 181
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E NFG + KSDV+S+G++L+E+V
Sbjct: 182 EAI--NFGSFTIKSDVWSFGILLMEIV 206
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 122/235 (51%), Gaps = 22/235 (9%)
Query: 113 FLEDYRTVNP---TRYTYKELKKITSKFKHRLGQGGYGSVFRGKL-FNG---IPVAVKML 165
F++ + +P R KE+ K + +G G +G V G L G I VA+K L
Sbjct: 10 FIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTL 69
Query: 166 E--HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKT 223
+ + + ++F++E + +G+ H +++ L G ++ T ++ EFM NGSL+ F+ +
Sbjct: 70 KSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL--RQ 127
Query: 224 NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL 283
N + +L + G+A G++YL + +H D+ NIL++ N K+SDFGL
Sbjct: 128 NDGQFTVI---QLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGL 181
Query: 284 AKLCSKDISIVSLTAARG---TAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++ D S + T+A G + APE + + + SDV+SYG+++ E++
Sbjct: 182 SRFLEDDTSDPTYTSALGGKIPIRWTAPEAI--QYRKFTSASDVWSYGIVMWEVM 234
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 66
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ +T P +L +A +A G+
Sbjct: 67 KLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMA 121
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 122 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAP 177
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 178 E--AALYGRFTIKSDVWSFGILLTELT 202
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 15/201 (7%)
Query: 139 HRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQE---FINEVATIGRIHHFHIVRLLG 195
R+G G +G+V++GK VAVKML Q+ F NEV + + H +I+ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ S + A+V ++ SL + + S +KL IA ARG++YLH
Sbjct: 88 Y-STAPQLAIVTQWCEGSSLYHHLHA-----SETKFEMKKLIDIARQTARGMDYLHA--- 138
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS-RN 314
+ I+H D+K +NI L + KI DFGLA S+ G+ ++APE+ ++
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
S++SDVY++G++L E++
Sbjct: 199 SNPYSFQSDVYAFGIVLYELM 219
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ +T P +L +A +A G+
Sbjct: 240 KLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMA 294
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 295 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAP 350
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 351 E--AALYGRFTIKSDVWSFGILLTELT 375
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ +T P +L +A +A G+
Sbjct: 240 KLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMA 294
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 295 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAP 350
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 351 E--AALYGRFTIKSDVWSFGILLTELT 375
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 139 HRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQE---FINEVATIGRIHHFHIVRLLG 195
R+G G +G+V++GK VAVKML Q+ F NEV + + H +I+ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ ++ + A+V ++ SL + + S +KL IA ARG++YLH
Sbjct: 88 YSTK-PQLAIVTQWCEGSSLYHHLHA-----SETKFEMKKLIDIARQTARGMDYLHA--- 138
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS-RN 314
+ I+H D+K +NI L + KI DFGLA S+ G+ ++APE+ ++
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
S++SDVY++G++L E++
Sbjct: 199 SNPYSFQSDVYAFGIVLYELM 219
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ +T P +L +A +A G+
Sbjct: 240 KLVQLYAVVSEEP-IYIVGEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMA 294
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 295 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAP 350
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 351 E--AALYGRFTIKSDVWSFGILLTELT 375
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 17/203 (8%)
Query: 141 LGQGGYGSVFRGKLF----NGIPVAVKMLE--HLKGNGQEFINEVATIGRIHHFHIVRLL 194
+G G G V G+L +PVA+K L+ + + ++F++E + +G+ H +I+RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
G + G +V E+M NGSL+ F+ + + +L + GV G+ YL
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-----FTIMQLVGMLRGVGAGMRYL---S 168
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI-SIVSLTAARGTAGYIAPELFSR 313
+ +H D+ N+L+D N K+SDFGL+++ D + + T + + APE +
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA- 227
Query: 314 NFGEVSYKSDVYSYGMMLLEMVG 336
F S SDV+S+G+++ E++
Sbjct: 228 -FRTFSSASDVWSFGVVMWEVLA 249
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 20/203 (9%)
Query: 141 LGQGGYGSVFRGKLFN-----GIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRL 193
LG G +G+V +G IPV +K++E G Q + + IG + H HIVRL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHR-PLSWEKLKKIAFGVARGVEYLHQ 252
LG C G+ LV +++P GSL + HR L + L +A+G+ YL +
Sbjct: 81 LGLCP-GSSLQLVTQYLPLGSLLDHV------RQHRGALGPQLLLNWGVQIAKGMYYLEE 133
Query: 253 GCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS 312
++H ++ N+LL Q +++DFG+A L D + + A+ ++A L S
Sbjct: 134 ---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA--LES 188
Query: 313 RNFGEVSYKSDVYSYGMMLLEMV 335
+FG+ +++SDV+SYG+ + E++
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWELM 211
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 105/203 (51%), Gaps = 17/203 (8%)
Query: 141 LGQGGYGSVFRGKLF----NGIPVAVKMLE--HLKGNGQEFINEVATIGRIHHFHIVRLL 194
+G G G V G+L +PVA+K L+ + + ++F++E + +G+ H +I+RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
G + G +V E+M NGSL+ F+ + + +L + GV G+ YL
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-----FTIMQLVGMLRGVGAGMRYL---S 168
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV-SLTAARGTAGYIAPELFSR 313
+ +H D+ N+L+D N K+SDFGL+++ D + T + + APE +
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA- 227
Query: 314 NFGEVSYKSDVYSYGMMLLEMVG 336
F S SDV+S+G+++ E++
Sbjct: 228 -FRTFSSASDVWSFGVVMWEVLA 249
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 118/233 (50%), Gaps = 27/233 (11%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE 174
P + E + K LG+G +G V F GI VAVKML+ + +
Sbjct: 18 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATXRTVAVKMLKEGATHSEH 76
Query: 175 --FINEVATIGRI-HHFHIVRLLGFCSE-GTRRALVYEFMPNGSLEKFIFSKTNS-SSHR 229
++E+ + I HH ++V LLG C++ G ++ EF G+L ++ SK N ++
Sbjct: 77 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 230 P-------LSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
P L+ E L +F VA+G+E+L +++ +H D+ NILL KI DFG
Sbjct: 137 PEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFG 193
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
LA+ KD V AR ++APE +F R + + +SDV+S+G++L E+
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 243
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 322
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ +T P +L +A +A G+
Sbjct: 323 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMA 377
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 378 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAP 433
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 434 E--AALYGRFTIKSDVWSFGILLTELT 458
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + +I H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHE 73
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ + P +L +A +A G+
Sbjct: 74 KLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMA 128
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAP 184
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 185 E--AALYGRFTIKSDVWSFGILLTELT 209
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ +T P +L ++ +A G+
Sbjct: 71 KLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLP----QLVDMSAQIASGMA 125
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 126 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEWTARQGAKFPIKWTAP 181
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 182 E--AALYGRFTIKSDVWSFGILLTELT 206
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
ELK+ LG G +G V GK VAVKM++ + EF E T+ ++ H
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHP 63
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+ G CS+ +V E++ NG L ++ S + L +L ++ + V G+
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYL-----RSHGKGLEPSQLLEMCYDVCEGMA 118
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
+L + + +H D+ N L+D + K+SDFG+ + D VS + + AP
Sbjct: 119 FLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD-QYVSSVGTKFPVKWSAP 174
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEM 334
E+F ++ + S KSDV+++G+++ E+
Sbjct: 175 EVF--HYFKYSSKSDVWAFGILMWEV 198
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ +T P +L ++ +A G+
Sbjct: 71 KLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLP----QLVDMSAQIASGMA 125
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 126 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAP 181
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 182 E--AALYGRFTIKSDVWSFGILLTELT 206
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 113/225 (50%), Gaps = 20/225 (8%)
Query: 121 NPTRYTY---KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKMLE--HLKGN 171
+P R + KEL K + +G G +G V G+L + VA+K L+ + +
Sbjct: 28 DPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQ 87
Query: 172 GQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPL 231
++F+ E + +G+ H ++V L G + G +V EFM NG+L+ F+
Sbjct: 88 RRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-----F 142
Query: 232 SWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI 291
+ +L + G+A G+ YL + +H D+ NIL++ N K+SDFGL+++ D
Sbjct: 143 TVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDP 199
Query: 292 SIV-SLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
V + T + + APE + + + SDV+SYG+++ E++
Sbjct: 200 EAVYTTTGGKIPVRWTAPEAI--QYRKFTSASDVWSYGIVMWEVM 242
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 62
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ + P +L +A +A G+
Sbjct: 63 KLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMA 117
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 118 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAP 173
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 174 E--AALYGRFTIKSDVWSFGILLTELT 198
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ + P +L +A +A G+
Sbjct: 74 KLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMA 128
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAP 184
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 185 E--AALYGRFTIKSDVWSFGILLTELT 209
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 64
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ + P +L +A +A G+
Sbjct: 65 KLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMA 119
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 120 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAP 175
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 176 E--AALYGRFTIKSDVWSFGILLTELT 200
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 115/219 (52%), Gaps = 23/219 (10%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLFNGIP------VAVKMLE--HLKGNGQEFINEV 179
KE+ K + +G G +G V RG+L P VA+K L+ + + +EF++E
Sbjct: 9 KEIDVSYVKIEEVIGAGEFGEVCRGRL--KAPGKKESCVAIKTLKGGYTERQRREFLSEA 66
Query: 180 ATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKI 239
+ +G+ H +I+RL G + ++ EFM NG+L+ F+ + N + +L +
Sbjct: 67 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTVI---QLVGM 121
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
G+A G+ YL + +H D+ NIL++ N K+SDFGL++ ++ S + T++
Sbjct: 122 LRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS 178
Query: 300 RG---TAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
G + APE + F + + SD +SYG+++ E++
Sbjct: 179 LGGKIPIRWTAPEAIA--FRKFTSASDAWSYGIVMWEVM 215
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ + P +L +A +A G+
Sbjct: 74 KLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMA 128
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAP 184
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 185 E--AALYGRFTIKSDVWSFGILLTELT 209
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + RLG G +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHD 64
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ R L L +A VA G+
Sbjct: 65 KLVQLYAVVSE-EPIYIVTEYMNKGSLLDFL----KDGEGRALKLPNLVDMAAQVAAGMA 119
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ + KI+DFGLA+L +D + A+ + AP
Sbjct: 120 YIER---MNYIHRDLRSANILVGNGLICKIADFGLARLI-EDNEXTARQGAKFPIKWTAP 175
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+V
Sbjct: 176 E--AALYGRFTIKSDVWSFGILLTELV 200
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ + P +L +A +A G+
Sbjct: 74 KLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMA 128
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAP 184
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 185 E--AALYGRFTIKSDVWSFGILLTELT 209
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ + P +L +A +A G+
Sbjct: 74 KLVQLYAVVSEEP-IYIVCEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMA 128
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAP 184
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 185 E--AALYGRFTIKSDVWSFGILLTELT 209
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 120/233 (51%), Gaps = 20/233 (8%)
Query: 113 FLEDYRTVNPTRYTY---KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKML 165
F++ + +PT+ + KEL +G G +G V G+L I VA+K L
Sbjct: 22 FVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 166 E--HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKT 223
+ + + ++F+ E + +G+ H +I+RL G ++ +V E+M NGSL+ F+ +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK 139
Query: 224 NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL 283
+ + + +L + G+A G++YL + +H D+ NIL++ N K+SDFGL
Sbjct: 140 HDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 284 AKLCSKDISIVSLT-AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
A++ D T + + +PE + + + + SDV+SYG++L E++
Sbjct: 194 ARVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 112/215 (52%), Gaps = 17/215 (7%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKMLE--HLKGNGQEFINEVAT 181
KE++ + +G G +G V G+L +PVA+K L+ + + ++F+ E +
Sbjct: 17 KEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASI 76
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAF 241
+G+ H +I+ L G ++ +V E+M NGSL+ F+ K N + +L +
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL--KKNDGQFTVI---QLVGMLR 131
Query: 242 GVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT-AAR 300
G++ G++YL + +H D+ NIL++ N K+SDFGL+++ D T +
Sbjct: 132 GISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 188
Query: 301 GTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ APE + F + + SDV+SYG+++ E+V
Sbjct: 189 IPIRWTAPEAIA--FRKFTSASDVWSYGIVMWEVV 221
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 116/224 (51%), Gaps = 23/224 (10%)
Query: 123 TRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNGIP------VAVKMLE--HLKGNGQE 174
R KE+ K + +G G +G V RG+L P VA+K L+ + + +E
Sbjct: 6 VREFAKEIDVSYVKIEEVIGAGEFGEVCRGRL--KAPGKKESCVAIKTLKGGYTERQRRE 63
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWE 234
F++E + +G+ H +I+RL G + ++ EFM NG+L+ F+ + N +
Sbjct: 64 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTVI--- 118
Query: 235 KLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV 294
+L + G+A G+ YL + +H D+ NIL++ N K+SDFGL++ ++ S
Sbjct: 119 QLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP 175
Query: 295 SLTAARG---TAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ T++ G + APE + F + + SD +SYG+++ E++
Sbjct: 176 TETSSLGGKIPIRWTAPEAIA--FRKFTSASDAWSYGIVMWEVM 217
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 113/217 (52%), Gaps = 19/217 (8%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKMLE--HLKGNGQEFINEVAT 181
KE+ K + +G G +G V G L I VA+K L+ + + ++F++E +
Sbjct: 2 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 61
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAF 241
+G+ H +++ L G ++ T ++ EFM NGSL+ F+ + N + +L +
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTVI---QLVGMLR 116
Query: 242 GVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARG 301
G+A G++YL + +H + NIL++ N K+SDFGL++ D S + T+A G
Sbjct: 117 GIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 173
Query: 302 ---TAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ APE + + + SDV+SYG+++ E++
Sbjct: 174 GKIPIRWTAPEAI--QYRKFTSASDVWSYGIVMWEVM 208
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + K + +LG G +G V+ VAVK ++ + + F+ E + + H
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 237
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L ++ ++ EFM GSL F+ K++ S +PL KL + +A G+
Sbjct: 238 KLVKLHAVVTKEPI-YIITEFMAKGSLLDFL--KSDEGSKQPLP--KLIDFSAQIAEGMA 292
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
++ Q + +H D++ NIL+ + KI+DFGLA++ A+ + AP
Sbjct: 293 FIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARV-----------GAKFPIKWTAP 338
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E NFG + KSDV+S+G++L+E+V
Sbjct: 339 EAI--NFGSFTIKSDVWSFGILLMEIV 363
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ + P +L +A +A G+
Sbjct: 74 KLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMA 128
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D+ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 129 YVER---MNYVHRDLAAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAP 184
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 185 E--AALYGRFTIKSDVWSFGILLTELT 209
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 120/233 (51%), Gaps = 20/233 (8%)
Query: 113 FLEDYRTVNPTRYTY---KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKML 165
F++ + +PT+ + KEL +G G +G V G+L I VA+K L
Sbjct: 22 FVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 166 E--HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKT 223
+ + + ++F+ E + +G+ H +I+RL G ++ +V E+M NGSL+ F+ +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK 139
Query: 224 NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL 283
+ + + +L + G+A G++YL + +H D+ NIL++ N K+SDFGL
Sbjct: 140 HDAQFTVI---QLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGL 193
Query: 284 AKLCSKDISIVSLT-AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+++ D T + + +PE + + + + SDV+SYG++L E++
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 120/233 (51%), Gaps = 20/233 (8%)
Query: 113 FLEDYRTVNPTRYTY---KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKML 165
F++ + +PT+ + KEL +G G +G V G+L I VA+K L
Sbjct: 22 FVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 166 E--HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKT 223
+ + + ++F+ E + +G+ H +I+RL G ++ +V E+M NGSL+ F+ +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK 139
Query: 224 NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL 283
+ + + +L + G+A G++YL + +H D+ NIL++ N K+SDFGL
Sbjct: 140 HDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 284 AKLCSKDISIVSLT-AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+++ D T + + +PE + + + + SDV+SYG++L E++
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 120/233 (51%), Gaps = 20/233 (8%)
Query: 113 FLEDYRTVNPTRYTY---KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKML 165
F++ + +PT+ + KEL +G G +G V G+L I VA+K L
Sbjct: 22 FVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 166 E--HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKT 223
+ + + ++F+ E + +G+ H +I+RL G ++ +V E+M NGSL+ F+ +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK 139
Query: 224 NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL 283
+ + + +L + G+A G++YL + +H D+ NIL++ N K+SDFGL
Sbjct: 140 HDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 284 AKLCSKDISIVSLT-AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+++ D T + + +PE + + + + SDV+SYG++L E++
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M G L F+ + P +L +A +A G+
Sbjct: 74 KLVQLYAVVSEEP-IYIVMEYMSKGCLLDFLKGEMGKYLRLP----QLVDMAAQIASGMA 128
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAP 184
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 185 E--AALYGRFTIKSDVWSFGILLTELT 209
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 29/235 (12%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE 174
P + E + K LG+G +G V F GI VAVKML+ + +
Sbjct: 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEH 74
Query: 175 --FINEVATIGRI-HHFHIVRLLGFCSE-GTRRALVYEFMPNGSLEKFIFSKTNSSSHRP 230
++E+ + I HH ++V LLG C++ G ++ EF G+L ++ SK N
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 231 LSWEKLKK----------IAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISD 280
++ E L K +F VA+G+E+L +++ +H D+ NILL KI D
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 281 FGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
FGLA+ KD V AR ++APE +F R + + +SDV+S+G++L E+
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 243
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHE 240
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M GSL F+ + P +L +A +A G+
Sbjct: 241 KLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMA 295
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGL +L +D + A+ + AP
Sbjct: 296 YVER---MNYVHRDLRAANILVGENLVCKVADFGLGRLI-EDNEYTARQGAKFPIKWTAP 351
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 352 E--AALYGRFTIKSDVWSFGILLTELT 376
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHF 188
E+ + + + + +LGQG +G V+ G VA+K L+ + + F+ E + ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+V+L SE +V E+M G L F+ + P +L +A +A G+
Sbjct: 74 KLVQLYAVVSEEP-IYIVTEYMSKGCLLDFLKGEMGKYLRLP----QLVDMAAQIASGMA 128
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
Y+ + +H D++ NIL+ N K++DFGLA+L +D + A+ + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAP 184
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + +G + KSDV+S+G++L E+
Sbjct: 185 E--AALYGRFTIKSDVWSFGILLTELT 209
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 23/244 (9%)
Query: 117 YRTVNPTRYTYKE---LKKITSKFKHRLGQGGYGSVFRGKLFN------GIPVAVKMLEH 167
Y ++PT+ Y E + +F LG G +G V F + VAVKML+
Sbjct: 19 YTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS 78
Query: 168 LK--GNGQEFINEVATIGRI-HHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTN 224
+ ++E+ + + H +IV LLG C+ G ++ E+ G L F+ K
Sbjct: 79 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAE 138
Query: 225 SS----SHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISD 280
+ RPL L + VA+G+ +L ++ +H D+ N+LL + KI D
Sbjct: 139 ADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGD 195
Query: 281 FGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 339
FGLA+ D + + AR ++APE +F + + +SDV+SYG++L E+
Sbjct: 196 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWEIFSLGL 252
Query: 340 NKDP 343
N P
Sbjct: 253 NPYP 256
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 120/260 (46%), Gaps = 40/260 (15%)
Query: 116 DYRTVNPTRYTYK---ELKKITSKFKHRLGQGGYGSVFRGKLFN------GIPVAVKMLE 166
+Y V+ Y Y E + +F LG G +G V + I VAVKML+
Sbjct: 25 EYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLK 84
Query: 167 HLKGNGQE---FINEVATIGRI-HHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK 222
K + E ++E+ + ++ H +IV LLG C+ L++E+ G L ++ SK
Sbjct: 85 E-KADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK 143
Query: 223 TNSSSHRPLSWEKLKKI-----------------AFGVARGVEYLH-QGCNQRILHFDIK 264
S + +E K++ A+ VA+G+E+L + C +H D+
Sbjct: 144 REKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLA 199
Query: 265 PHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSD 323
N+L+ H KI DFGLA+ D + V AR ++APE LF G + KSD
Sbjct: 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE---GIYTIKSD 256
Query: 324 VYSYGMMLLEMVGCRKNKDP 343
V+SYG++L E+ N P
Sbjct: 257 VWSYGILLWEIFSLGVNPYP 276
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 29/235 (12%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE 174
P + E + K LG+G +G V F GI VAVKML+ + +
Sbjct: 7 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEH 65
Query: 175 --FINEVATIGRI-HHFHIVRLLGFCSE-GTRRALVYEFMPNGSLEKFIFSKTNSSSHRP 230
++E+ + I HH ++V LLG C++ G ++ EF G+L ++ SK N
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 231 LSWEKLKK----------IAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISD 280
++ E L K +F VA+G+E+L +++ +H D+ NILL KI D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 281 FGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
FGLA+ KD V AR ++APE +F R + + +SDV+S+G++L E+
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 234
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 119/233 (51%), Gaps = 20/233 (8%)
Query: 113 FLEDYRTVNPTRYTY---KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKML 165
F++ + +PT+ + KEL +G G +G V G+L I VA+K L
Sbjct: 22 FVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 166 E--HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKT 223
+ + + ++F+ E + +G+ H +I+RL G ++ +V E+M NGSL+ F+ +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK 139
Query: 224 NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL 283
+ + + +L + G+A G++YL + +H D+ NIL++ N K+SDFGL
Sbjct: 140 HDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 284 AKLCSKDISIVSLT-AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++ D T + + +PE + + + + SDV+SYG++L E++
Sbjct: 194 GRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 120/240 (50%), Gaps = 29/240 (12%)
Query: 117 YRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEHLKGN 171
Y +PT + + LK I+ +LG+G +GSV + G VAVK L+H +
Sbjct: 12 YACQDPTIFEERHLKYIS-----QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD 66
Query: 172 GQ-EFINEVATIGRIHHFHIVRLLGFCSEGTRRAL--VYEFMPNGSLEKFIFSKTNSSSH 228
Q +F E+ + +H IV+ G R++L V E++P+G L F+ H
Sbjct: 67 QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL------QRH 120
Query: 229 RP-LSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKL- 286
R L +L + + +G+EYL ++R +H D+ NIL++ KI+DFGLAKL
Sbjct: 121 RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLL 177
Query: 287 -CSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDPA 344
KD +V + + APE S N S +SDV+S+G++L E+ C K+ P+
Sbjct: 178 PLDKDYYVVR-EPGQSPIFWYAPESLSDNI--FSRQSDVWSFGVVLYELFTYCDKSCSPS 234
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 139 HRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQE---FINEVATIGRIHHFHIVRLLG 195
R+G G +G+V++GK VAVKML Q+ F NEV + + H +I+ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ S + A+V ++ SL + KL IA A+G++YLH
Sbjct: 72 Y-STAPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA--- 122
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS-RN 314
+ I+H D+K +NI L + KI DFGLA + S+ G+ ++APE+ ++
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
S++SDVY++G++L E++
Sbjct: 183 KNPYSFQSDVYAFGIVLYELM 203
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 23/244 (9%)
Query: 117 YRTVNPTRYTYKE---LKKITSKFKHRLGQGGYGSVFRGKLFN------GIPVAVKMLEH 167
Y ++PT+ Y E + +F LG G +G V F + VAVKML+
Sbjct: 27 YTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS 86
Query: 168 LK--GNGQEFINEVATIGRI-HHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTN 224
+ ++E+ + + H +IV LLG C+ G ++ E+ G L F+ K
Sbjct: 87 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAE 146
Query: 225 SS----SHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISD 280
+ RPL L + VA+G+ +L ++ +H D+ N+LL + KI D
Sbjct: 147 ADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGD 203
Query: 281 FGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 339
FGLA+ D + + AR ++APE +F + + +SDV+SYG++L E+
Sbjct: 204 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWEIFSLGL 260
Query: 340 NKDP 343
N P
Sbjct: 261 NPYP 264
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 29/235 (12%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE 174
P + E + K LG+G +G V F GI VAVKML+ + +
Sbjct: 7 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEH 65
Query: 175 --FINEVATIGRI-HHFHIVRLLGFCSE-GTRRALVYEFMPNGSLEKFIFSKTNSSSHRP 230
++E+ + I HH ++V LLG C++ G ++ EF G+L ++ SK N
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 231 LSWEKLKK----------IAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISD 280
++ E L K +F VA+G+E+L +++ +H D+ NILL KI D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 281 FGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
FGLA+ KD V AR ++APE +F R + + +SDV+S+G++L E+
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 234
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 29/235 (12%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE 174
P + E + K LG+G +G V F GI VAVKML+ + +
Sbjct: 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEH 74
Query: 175 --FINEVATIGRI-HHFHIVRLLGFCSE-GTRRALVYEFMPNGSLEKFIFSKTNSSSHRP 230
++E+ + I HH ++V LLG C++ G ++ EF G+L ++ SK N
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 231 LSWEKLKK----------IAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISD 280
++ E L K +F VA+G+E+L +++ +H D+ NILL KI D
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 281 FGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
FGLA+ KD V AR ++APE +F R + + +SDV+S+G++L E+
Sbjct: 192 FGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 243
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 114/228 (50%), Gaps = 29/228 (12%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINEV 179
E + K LG+G +G V F GI VAVKML+ + + ++E+
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSEL 81
Query: 180 ATIGRI-HHFHIVRLLGFCSE-GTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
+ I HH ++V LLG C++ G ++ EF G+L ++ SK N ++ E L
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 141
Query: 238 K----------IAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLC 287
K +F VA+G+E+L +++ +H D+ NILL KI DFGLA+
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 288 SKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
KD V AR ++APE +F R + + +SDV+S+G++L E+
Sbjct: 199 YKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 243
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 110/212 (51%), Gaps = 25/212 (11%)
Query: 141 LGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINEVATIGRI-HHFHI 190
LG+G +G V F GI VAVKML+ + + ++E+ + I HH ++
Sbjct: 35 LGRGAFGQVIEADAF-GIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 191 VRLLGFCSE-GTRRALVYEFMPNGSLEKFIFSKTNSSSHRP------LSWEKLKKIAFGV 243
V LLG C++ G ++ EF G+L ++ SK N L+ E L +F V
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTA 303
A+G+E+L +++ +H D+ NILL KI DFGLA+ KD V AR
Sbjct: 154 AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 304 GYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
++APE +F R + + +SDV+S+G++L E+
Sbjct: 211 KWMAPETIFDRVY---TIQSDVWSFGVLLWEI 239
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 62
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN 121
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 122 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 173 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 213
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 7 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 65
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 66 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN 124
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 125 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 175
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 176 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 5 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 63
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 64 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLN 122
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 123 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 173
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 174 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 214
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 120/233 (51%), Gaps = 20/233 (8%)
Query: 113 FLEDYRTVNPTRYTY---KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKML 165
+++ + +PT+ + KEL +G G +G V G+L I VA+K L
Sbjct: 22 YVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 166 E--HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKT 223
+ + + ++F+ E + +G+ H +I+RL G ++ +V E+M NGSL+ F+ +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK 139
Query: 224 NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL 283
+ + + +L + G+A G++YL + +H D+ NIL++ N K+SDFGL
Sbjct: 140 HDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 284 AKLCSKDISIVSLT-AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+++ D T + + +PE + + + + SDV+SYG++L E++
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 114/228 (50%), Gaps = 29/228 (12%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINEV 179
E + K LG+G +G V F GI VAVKML+ + + ++E+
Sbjct: 60 EFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSEL 118
Query: 180 ATIGRI-HHFHIVRLLGFCSE-GTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
+ I HH ++V LLG C++ G ++ EF G+L ++ SK N ++ E L
Sbjct: 119 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 178
Query: 238 K----------IAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLC 287
K +F VA+G+E+L +++ +H D+ NILL KI DFGLA+
Sbjct: 179 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 235
Query: 288 SKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
KD V AR ++APE +F R + + +SDV+S+G++L E+
Sbjct: 236 YKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 280
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 120/233 (51%), Gaps = 20/233 (8%)
Query: 113 FLEDYRTVNPTRYTY---KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKML 165
+++ + +PT+ + KEL +G G +G V G+L I VA+K L
Sbjct: 20 YVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 79
Query: 166 E--HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKT 223
+ + + ++F+ E + +G+ H +I+RL G ++ +V E+M NGSL+ F+ +
Sbjct: 80 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK 137
Query: 224 NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL 283
+ + + +L + G+A G++YL + +H D+ NIL++ N K+SDFGL
Sbjct: 138 HDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 191
Query: 284 AKLCSKDISIVSLT-AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+++ D T + + +PE + + + + SDV+SYG++L E++
Sbjct: 192 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 242
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 62
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN 121
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 122 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 173 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 213
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 116/225 (51%), Gaps = 20/225 (8%)
Query: 121 NPTRYTY---KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKMLE--HLKGN 171
+PT+ + KEL +G G +G V G+L I VA+K L+ + +
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 172 GQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPL 231
++F+ E + +G+ H +I+RL G ++ +V E+M NGSL+ F+ + + + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVI 147
Query: 232 SWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI 291
+L + G+A G++YL + +H D+ NIL++ N K+SDFGL+++ D
Sbjct: 148 ---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 292 SIVSLT-AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
T + + +PE + + + + SDV+SYG++L E++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 28/215 (13%)
Query: 141 LGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINEVATIGRI-HHFHI 190
LG+G +G V F GI VAVKML+ + + ++E+ + I HH ++
Sbjct: 36 LGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 94
Query: 191 VRLLGFCSE-GTRRALVYEFMPNGSLEKFIFSKTNS--SSHRP-------LSWEKLKKIA 240
V LLG C++ G ++ EF G+L ++ SK N P L+ E L +
Sbjct: 95 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYS 154
Query: 241 FGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR 300
F VA+G+E+L +++ +H D+ NILL KI DFGLA+ KD V AR
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 301 GTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
++APE +F R + + +SDV+S+G++L E+
Sbjct: 212 LPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 243
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 8 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 66
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 67 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN 125
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 126 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 176
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 177 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 217
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 114/228 (50%), Gaps = 29/228 (12%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINEV 179
E + K LG+G +G V F GI VAVKML+ + + ++E+
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSEL 72
Query: 180 ATIGRI-HHFHIVRLLGFCSE-GTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
+ I HH ++V LLG C++ G ++ EF G+L ++ SK N ++ E L
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 238 K----------IAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLC 287
K +F VA+G+E+L +++ +H D+ NILL KI DFGLA+
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 288 SKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
KD V AR ++APE +F R + + +SDV+S+G++L E+
Sbjct: 190 YKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 234
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 64
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 65 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN 123
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 124 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 174
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 175 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 215
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 5 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 63
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 64 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN 122
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 123 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 173
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 174 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 214
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 139 HRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQE---FINEVATIGRIHHFHIVRLLG 195
R+G G +G+V++GK VAVKML Q+ F NEV + + H +I+ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ ++ + A+V ++ SL + KL IA A+G++YLH
Sbjct: 72 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA--- 122
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS-RN 314
+ I+H D+K +NI L + KI DFGLA + S+ G+ ++APE+ ++
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
S++SDVY++G++L E++
Sbjct: 183 KNPYSFQSDVYAFGIVLYELM 203
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 139 HRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQE---FINEVATIGRIHHFHIVRLLG 195
R+G G +G+V++GK VAVKML Q+ F NEV + + H +I+ +G
Sbjct: 16 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ ++ + A+V ++ SL + KL IA A+G++YLH
Sbjct: 74 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA--- 124
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS-RN 314
+ I+H D+K +NI L + KI DFGLA + S+ G+ ++APE+ ++
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
S++SDVY++G++L E++
Sbjct: 185 KNPYSFQSDVYAFGIVLYELM 205
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 114/228 (50%), Gaps = 29/228 (12%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINEV 179
E + K LG+G +G V F GI VAVKML+ + + ++E+
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSEL 72
Query: 180 ATIGRI-HHFHIVRLLGFCSE-GTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
+ I HH ++V LLG C++ G ++ EF G+L ++ SK N ++ E L
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 238 K----------IAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLC 287
K +F VA+G+E+L +++ +H D+ NILL KI DFGLA+
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 288 SKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
KD V AR ++APE +F R + + +SDV+S+G++L E+
Sbjct: 190 YKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 234
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 27/225 (12%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLFNGIP------VAVKMLEHLKGNG-QEFINEVA 180
+ +K+ K LG+G +G VF + +N P VAVK L+ N ++F E
Sbjct: 8 QHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAE 67
Query: 181 TIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK-------TNSSSHRPLSW 233
+ + H HIV+ G C EG +V+E+M +G L KF+ + + L+
Sbjct: 68 LLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQ 127
Query: 234 EKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI 293
++ IA +A G+ YL +Q +H D+ N L+ N KI DFG+ S+D+
Sbjct: 128 SQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGM----SRDVYS 180
Query: 294 VSLTAARG----TAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
G ++ PE S + + + +SDV+S G++L E+
Sbjct: 181 TDYYRVGGHTMLPIRWMPPE--SIMYRKFTTESDVWSLGVVLWEI 223
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 139 HRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQE---FINEVATIGRIHHFHIVRLLG 195
R+G G +G+V++GK VAVKML Q+ F NEV + + H +I+ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ ++ + A+V ++ SL + KL IA A+G++YLH
Sbjct: 77 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA--- 127
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS-RN 314
+ I+H D+K +NI L + KI DFGLA + S+ G+ ++APE+ ++
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
S++SDVY++G++L E++
Sbjct: 188 KNPYSFQSDVYAFGIVLYELM 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 139 HRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQE---FINEVATIGRIHHFHIVRLLG 195
R+G G +G+V++GK VAVKML Q+ F NEV + + H +I+ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ ++ + A+V ++ SL + KL IA A+G++YLH
Sbjct: 77 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA--- 127
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS-RN 314
+ I+H D+K +NI L + KI DFGLA + S+ G+ ++APE+ ++
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
S++SDVY++G++L E++
Sbjct: 188 KNPYSFQSDVYAFGIVLYELM 208
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 116/233 (49%), Gaps = 25/233 (10%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEH-LKGNGQE 174
+PT++ + LK F +LG+G +GSV + G VAVK L+H + + ++
Sbjct: 6 DPTQFEERHLK-----FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 60
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
F E+ + + H +IV+ G C RR L+ EF+P GSL +++ H
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI--- 117
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
KL + + +G+EYL +R +H D+ NIL+++ + KI DFGL K+ +D
Sbjct: 118 --KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
Query: 293 IVSLT-AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDP 343
+ + APE + + + S SDV+S+G++L E+ K+K P
Sbjct: 173 XXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 111/215 (51%), Gaps = 17/215 (7%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKMLE--HLKGNGQEFINEVAT 181
KEL +G G +G V G+L I VA+K L+ + + ++F+ E +
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAF 241
+G+ H +I+RL G ++ +V E+M NGSL+ F+ + + + + +L +
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVI---QLVGMLR 125
Query: 242 GVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT-AAR 300
G+A G++YL + +H D+ NIL++ N K+SDFGL+++ D T +
Sbjct: 126 GIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 301 GTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ +PE + + + + SDV+SYG++L E++
Sbjct: 183 IPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 215
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 139 HRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQE---FINEVATIGRIHHFHIVRLLG 195
R+G G +G+V++GK VAVKML Q+ F NEV + + H +I+ +G
Sbjct: 41 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ ++ + A+V ++ SL + KL IA A+G++YLH
Sbjct: 99 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA--- 149
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS-RN 314
+ I+H D+K +NI L + KI DFGLA + S+ G+ ++APE+ ++
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
S++SDVY++G++L E++
Sbjct: 210 KNPYSFQSDVYAFGIVLYELM 230
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 119/233 (51%), Gaps = 20/233 (8%)
Query: 113 FLEDYRTVNPTRYTY---KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKML 165
F++ + +PT+ + KEL +G G +G V G+L I VA+K L
Sbjct: 22 FVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 166 E--HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKT 223
+ + + ++F+ E + +G+ H +I+RL G ++ +V E M NGSL+ F+ +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RK 139
Query: 224 NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL 283
+ + + +L + G+A G++YL + +H D+ NIL++ N K+SDFGL
Sbjct: 140 HDAQFTVI---QLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGL 193
Query: 284 AKLCSKDISIVSLT-AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+++ D T + + +PE + + + + SDV+SYG++L E++
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 7 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 65
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 66 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN 124
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 125 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 175
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 176 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 216
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 7 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 65
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 66 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN 124
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 125 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 175
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 176 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 111/215 (51%), Gaps = 17/215 (7%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKMLE--HLKGNGQEFINEVAT 181
KEL +G G +G V G+L I VA+K L+ + + ++F+ E +
Sbjct: 28 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 87
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAF 241
+G+ H +I+RL G ++ +V E+M NGSL+ F+ + + + + +L +
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVI---QLVGMLR 142
Query: 242 GVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT-AAR 300
G+A G++YL + +H D+ NIL++ N K+SDFGL+++ D T +
Sbjct: 143 GIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 199
Query: 301 GTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ +PE + + + + SDV+SYG++L E++
Sbjct: 200 IPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 232
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 10 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 68
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 69 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN 127
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 128 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 178
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 179 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 219
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 139 HRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQE---FINEVATIGRIHHFHIVRLLG 195
R+G G +G+V++GK VAVKML Q+ F NEV + + H +I+ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ ++ + A+V ++ SL + KL IA A+G++YLH
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA--- 150
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS-RN 314
+ I+H D+K +NI L + KI DFGLA + S+ G+ ++APE+ ++
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
S++SDVY++G++L E++
Sbjct: 211 KNPYSFQSDVYAFGIVLYELM 231
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 62
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN 121
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 122 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 173 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 213
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 62
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLN 121
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 122 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 173 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 213
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 64
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 65 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN 123
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 124 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 174
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 175 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 215
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 7 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 65
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 66 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN 124
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 125 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 175
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 176 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 11 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 69
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 70 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN 128
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 129 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 179
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 180 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 220
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 116/235 (49%), Gaps = 29/235 (12%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE 174
P + E + K LG+G +G V F GI VAVKML+ + +
Sbjct: 18 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEH 76
Query: 175 --FINEVATIGRI-HHFHIVRLLGFCSE-GTRRALVYEFMPNGSLEKFIFSKTNS---SS 227
++E+ + I HH ++V LLG C++ G ++ EF G+L ++ SK N
Sbjct: 77 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 228 HRP-------LSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISD 280
P L+ E L +F VA+G+E+L +++ +H D+ NILL KI D
Sbjct: 137 EAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 193
Query: 281 FGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
FGLA+ KD V AR ++APE +F R + + +SDV+S+G++L E+
Sbjct: 194 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 245
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 31/226 (13%)
Query: 130 LKKITSKFKHRLGQGGYGSVFRGKLFNGIP------VAVKML-EHLKGNGQEFINEVATI 182
+K+ K LG+G +G VF + N +P VAVK L E + Q+F E +
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 74
Query: 183 GRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSS---------SHRPLSW 233
+ H HIVR G C+EG +V+E+M +G L +F+ S + + PL
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 234 EKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI 293
+L +A VA G+ YL +H D+ N L+ KI DFG+ S+DI
Sbjct: 135 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM----SRDIYS 187
Query: 294 VSLTAARGTA----GYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
G ++ PE + R F + +SDV+S+G++L E+
Sbjct: 188 TDYYRVGGRTMLPIRWMPPESILYRKF---TTESDVWSFGVVLWEI 230
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 14 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 72
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 73 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN 131
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 132 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 182
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 183 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 29 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 87
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 88 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN 146
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 147 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 197
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 198 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 238
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 31/226 (13%)
Query: 130 LKKITSKFKHRLGQGGYGSVFRGKLFNGIP------VAVKML-EHLKGNGQEFINEVATI 182
+K+ K LG+G +G VF + N +P VAVK L E + Q+F E +
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 68
Query: 183 GRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSS---------SHRPLSW 233
+ H HIVR G C+EG +V+E+M +G L +F+ S + + PL
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 234 EKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI 293
+L +A VA G+ YL +H D+ N L+ KI DFG+ S+DI
Sbjct: 129 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM----SRDIYS 181
Query: 294 VSLTAARGTA----GYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
G ++ PE + R F + +SDV+S+G++L E+
Sbjct: 182 TDYYRVGGRTMLPIRWMPPESILYRKF---TTESDVWSFGVVLWEI 224
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 110/212 (51%), Gaps = 25/212 (11%)
Query: 141 LGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINEVATIGRI-HHFHI 190
LG+G +G V F GI VAVKML+ + + ++E+ + I HH ++
Sbjct: 35 LGRGAFGQVIEADAF-GIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 191 VRLLGFCSE-GTRRALVYEFMPNGSLEKFIFSKTNSSSHRP------LSWEKLKKIAFGV 243
V LLG C++ G ++ EF G+L ++ SK N L+ E L +F V
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTA 303
A+G+E+L +++ +H D+ NILL KI DFGLA+ KD V AR
Sbjct: 154 AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 210
Query: 304 GYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
++APE +F R + + +SDV+S+G++L E+
Sbjct: 211 KWMAPETIFDRVY---TIQSDVWSFGVLLWEI 239
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 119/236 (50%), Gaps = 29/236 (12%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEHLKGNGQ-E 174
+PT + + LK I+ +LG+G +GSV + G VAVK L+H + Q +
Sbjct: 3 DPTIFEERHLKYIS-----QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD 57
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRRAL--VYEFMPNGSLEKFIFSKTNSSSHRP-L 231
F E+ + +H IV+ G R++L V E++P+G L F+ HR L
Sbjct: 58 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL------QRHRARL 111
Query: 232 SWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKL--CSK 289
+L + + +G+EYL ++R +H D+ NIL++ KI+DFGLAKL K
Sbjct: 112 DASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 168
Query: 290 DISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDPA 344
D +V + + APE S N S +SDV+S+G++L E+ C K+ P+
Sbjct: 169 DYYVVR-EPGQSPIFWYAPESLSDNI--FSRQSDVWSFGVVLYELFTYCDKSCSPS 221
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 29/211 (13%)
Query: 136 KFKHRLGQGGYGSVFRGK--LFNGIPVAVKML--------EHLKGNGQEFINEVATIGRI 185
K +LG GG +V+ + + N I VA+K + E LK F EV ++
Sbjct: 14 KIVDKLGGGGMSTVYLAEDTILN-IKVAIKAIFIPPREKEETLK----RFEREVHNSSQL 68
Query: 186 HHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVAR 245
H +IV ++ E LV E++ +L ++I SH PLS + +
Sbjct: 69 SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI------ESHGPLSVDTAINFTNQILD 122
Query: 246 GVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGY 305
G+++ H + RI+H DIKP NIL+D N KI DFG+AK S + S+ GT Y
Sbjct: 123 GIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQY 178
Query: 306 IAPELFSRNFGEVSYK-SDVYSYGMMLLEMV 335
+PE + GE + + +D+YS G++L EM+
Sbjct: 179 FSPE---QAKGEATDECTDIYSIGIVLYEML 206
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 25/233 (10%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEH-LKGNGQE 174
+PT++ + LK F +LG+G +GSV + G VAVK L+H + + ++
Sbjct: 6 DPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 60
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
F E+ + + H +IV+ G C RR L+ E++P GSL ++ + H
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHI--- 117
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
KL + + +G+EYL +R +H D+ NIL+++ + KI DFGL K+ +D
Sbjct: 118 --KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
Query: 293 IVSL-TAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDP 343
+ + APE + + + S SDV+S+G++L E+ K+K P
Sbjct: 173 XXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 119/236 (50%), Gaps = 29/236 (12%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEHLKGNGQ-E 174
+PT + + LK I+ +LG+G +GSV + G VAVK L+H + Q +
Sbjct: 4 DPTIFEERHLKYIS-----QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD 58
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRRAL--VYEFMPNGSLEKFIFSKTNSSSHRP-L 231
F E+ + +H IV+ G R++L V E++P+G L F+ HR L
Sbjct: 59 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL------QRHRARL 112
Query: 232 SWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKL--CSK 289
+L + + +G+EYL ++R +H D+ NIL++ KI+DFGLAKL K
Sbjct: 113 DASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 169
Query: 290 DISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDPA 344
D +V + + APE S N S +SDV+S+G++L E+ C K+ P+
Sbjct: 170 DYYVVR-EPGQSPIFWYAPESLSDNI--FSRQSDVWSFGVVLYELFTYCDKSCSPS 222
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 137 FKHRLGQGGYGSVFRGKLFNG----IPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHI 190
F +G+G +G V+ G L + I AVK L + G+ +F+ E + H ++
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 191 VRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARG 246
+ LLG C SEG+ +V +M +G L FI ++T++ + + L I FG VA+G
Sbjct: 93 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-------IGFGLQVAKG 144
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKD-ISIVSLTAARGTAG 304
++YL +++ +H D+ N +LD F K++DFGLA+ + K+ S+ + T A+
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK 201
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E S + + KSDV+S+G++L E++
Sbjct: 202 WMALE--SLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K + VAVKML + + + + ++E+ + I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK----------TNSSSHRPLSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ N ++++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
+ +ARG+EYL +Q+ +H D+ N+L+ N KI+DFGLA+ + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K + VAVKML + + + + ++E+ + I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK----------TNSSSHRPLSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ N ++++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
+ +ARG+EYL +Q+ +H D+ N+L+ N KI+DFGLA+ + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 30/222 (13%)
Query: 127 YKELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIH 186
YKE++ + +G+G +G V + K + VA+K +E + + FI E+ + R++
Sbjct: 8 YKEIE-----VEEVVGRGAFGVVCKAK-WRAKDVAIKQIES-ESERKAFIVELRQLSRVN 60
Query: 187 HFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTN----SSSHRPLSWEKLKKIAFG 242
H +IV+L G C LV E+ GSL + +++H +SW
Sbjct: 61 HPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHA-MSW------CLQ 111
Query: 243 VARGVEYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARG 301
++GV YLH + ++H D+KP N+LL KI DFG A C DI +T +G
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA--C--DIQ-THMTNNKG 166
Query: 302 TAGYIAPELFS-RNFGEVSYKSDVYSYGMMLLEMVGCRKNKD 342
+A ++APE+F N+ E K DV+S+G++L E++ RK D
Sbjct: 167 SAAWMAPEVFEGSNYSE---KCDVFSWGIILWEVITRRKPFD 205
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 137 FKHRLGQGGYGSVFRGKLFNG----IPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHI 190
F +G+G +G V+ G L + I AVK L + G+ +F+ E + H ++
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 191 VRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARG 246
+ LLG C SEG+ +V +M +G L FI ++T++ + + L I FG VA+G
Sbjct: 94 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-------IGFGLQVAKG 145
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKD-ISIVSLTAARGTAG 304
++YL +++ +H D+ N +LD F K++DFGLA+ + K+ S+ + T A+
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E S + + KSDV+S+G++L E++
Sbjct: 203 WMALE--SLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 112/236 (47%), Gaps = 39/236 (16%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIP------VAVKML-EHLKGNGQ-EFINEVA 180
E + ++ +G+G +G VF+ + +P VAVKML E + Q +F E A
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 181 TIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS------------------K 222
+ + +IV+LLG C+ G L++E+M G L +F+ S +
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 223 TNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
+S PLS + IA VA G+ YL + ++ +H D+ N L+ N KI+DFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFG 219
Query: 283 LAKLCSKDISIVSLTAARGTAG----YIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
L S++I A G ++ PE S + + +SDV++YG++L E+
Sbjct: 220 L----SRNIYSADYYKADGNDAIPIRWMPPE--SIFYNRYTTESDVWAYGVVLWEI 269
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 31/226 (13%)
Query: 130 LKKITSKFKHRLGQGGYGSVFRGKLFNGIP------VAVKML-EHLKGNGQEFINEVATI 182
+K+ K LG+G +G VF + N +P VAVK L E + Q+F E +
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 97
Query: 183 GRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSS---------SHRPLSW 233
+ H HIVR G C+EG +V+E+M +G L +F+ S + + PL
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 234 EKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI 293
+L +A VA G+ YL +H D+ N L+ KI DFG+ S+DI
Sbjct: 158 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM----SRDIYS 210
Query: 294 VSLTAARGTA----GYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
G ++ PE + R F + +SDV+S+G++L E+
Sbjct: 211 TDYYRVGGRTMLPIRWMPPESILYRKF---TTESDVWSFGVVLWEI 253
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 25/234 (10%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEH-LKGNGQE 174
+PT++ + LK F +LG+G +GSV + G VAVK L+H + + ++
Sbjct: 3 DPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 57
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
F E+ + + H +IV+ G C RR L+ E++P GSL ++ H
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--- 114
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
KL + + +G+EYL +R +H D+ NIL+++ + KI DFGL K+ +D
Sbjct: 115 --KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
Query: 293 IVSLT-AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDPA 344
+ + APE + + + S SDV+S+G++L E+ K+K P
Sbjct: 170 FFKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSPP 221
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 137 FKHRLGQGGYGSVFRGKLFNG----IPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHI 190
F +G+G +G V+ G L + I AVK L + G+ +F+ E + H ++
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 191 VRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARG 246
+ LLG C SEG+ +V +M +G L FI ++T++ + + L I FG VA+G
Sbjct: 93 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-------IGFGLQVAKG 144
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKD-ISIVSLTAARGTAG 304
++YL +++ +H D+ N +LD F K++DFGLA+ + K+ S+ + T A+
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 201
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E S + + KSDV+S+G++L E++
Sbjct: 202 WMALE--SLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 137 FKHRLGQGGYGSVFRGKLFNG----IPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHI 190
F +G+G +G V+ G L + I AVK L + G+ +F+ E + H ++
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 191 VRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARG 246
+ LLG C SEG+ +V +M +G L FI ++T++ + + L I FG VA+G
Sbjct: 86 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-------IGFGLQVAKG 137
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKD-ISIVSLTAARGTAG 304
++YL +++ +H D+ N +LD F K++DFGLA+ + K+ S+ + T A+
Sbjct: 138 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 194
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E S + + KSDV+S+G++L E++
Sbjct: 195 WMALE--SLQTQKFTTKSDVWSFGVLLWELM 223
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 30/222 (13%)
Query: 127 YKELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIH 186
YKE++ + +G+G +G V + K + VA+K +E + + FI E+ + R++
Sbjct: 7 YKEIE-----VEEVVGRGAFGVVCKAK-WRAKDVAIKQIES-ESERKAFIVELRQLSRVN 59
Query: 187 HFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTN----SSSHRPLSWEKLKKIAFG 242
H +IV+L G C LV E+ GSL + +++H +SW
Sbjct: 60 HPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHA-MSW------CLQ 110
Query: 243 VARGVEYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARG 301
++GV YLH + ++H D+KP N+LL KI DFG A C DI +T +G
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA--C--DIQ-THMTNNKG 165
Query: 302 TAGYIAPELFS-RNFGEVSYKSDVYSYGMMLLEMVGCRKNKD 342
+A ++APE+F N+ E K DV+S+G++L E++ RK D
Sbjct: 166 SAAWMAPEVFEGSNYSE---KCDVFSWGIILWEVITRRKPFD 204
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 137 FKHRLGQGGYGSVFRGKLFNG----IPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHI 190
F +G+G +G V+ G L + I AVK L + G+ +F+ E + H ++
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 191 VRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARG 246
+ LLG C SEG+ +V +M +G L FI ++T++ + + L I FG VA+G
Sbjct: 91 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-------IGFGLQVAKG 142
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKD-ISIVSLTAARGTAG 304
++YL +++ +H D+ N +LD F K++DFGLA+ + K+ S+ + T A+
Sbjct: 143 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 199
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E S + + KSDV+S+G++L E++
Sbjct: 200 WMALE--SLQTQKFTTKSDVWSFGVLLWELM 228
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 137 FKHRLGQGGYGSVFRGKLFNG----IPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHI 190
F +G+G +G V+ G L + I AVK L + G+ +F+ E + H ++
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 191 VRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARG 246
+ LLG C SEG+ +V +M +G L FI ++T++ + + L I FG VA+G
Sbjct: 94 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-------IGFGLQVAKG 145
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKD-ISIVSLTAARGTAG 304
++YL +++ +H D+ N +LD F K++DFGLA+ + K+ S+ + T A+
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E S + + KSDV+S+G++L E++
Sbjct: 203 WMALE--SLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 25/233 (10%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEH-LKGNGQE 174
+PT++ + LK F +LG+G +GSV + G VAVK L+H + + ++
Sbjct: 34 DPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 88
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
F E+ + + H +IV+ G C RR L+ E++P GSL ++ H
Sbjct: 89 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--- 145
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
KL + + +G+EYL +R +H D+ NIL+++ + KI DFGL K+ +D
Sbjct: 146 --KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 200
Query: 293 IVSL-TAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDP 343
+ + APE + + + S SDV+S+G++L E+ K+K P
Sbjct: 201 XXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSP 251
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 25/234 (10%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEH-LKGNGQE 174
+PT++ + LK F +LG+G +GSV + G VAVK L+H + + ++
Sbjct: 2 DPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 56
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
F E+ + + H +IV+ G C RR L+ E++P GSL ++ H
Sbjct: 57 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--- 113
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
KL + + +G+EYL +R +H D+ NIL+++ + KI DFGL K+ +D
Sbjct: 114 --KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 168
Query: 293 IVSLT-AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDPA 344
+ + APE + + + S SDV+S+G++L E+ K+K P
Sbjct: 169 XXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSPP 220
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 137 FKHRLGQGGYGSVFRGKLFNG----IPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHI 190
F +G+G +G V+ G L + I AVK L + G+ +F+ E + H ++
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 191 VRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARG 246
+ LLG C SEG+ +V +M +G L FI ++T++ + + L I FG VA+G
Sbjct: 113 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-------IGFGLQVAKG 164
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKD-ISIVSLTAARGTAG 304
++YL +++ +H D+ N +LD F K++DFGLA+ + K+ S+ + T A+
Sbjct: 165 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 221
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E S + + KSDV+S+G++L E++
Sbjct: 222 WMALE--SLQTQKFTTKSDVWSFGVLLWELM 250
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 137 FKHRLGQGGYGSVFRGKLFNG----IPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHI 190
F +G+G +G V+ G L + I AVK L + G+ +F+ E + H ++
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 191 VRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARG 246
+ LLG C SEG+ +V +M +G L FI ++T++ + + L I FG VA+G
Sbjct: 92 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-------IGFGLQVAKG 143
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKD-ISIVSLTAARGTAG 304
++YL +++ +H D+ N +LD F K++DFGLA+ + K+ S+ + T A+
Sbjct: 144 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 200
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E S + + KSDV+S+G++L E++
Sbjct: 201 WMALE--SLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 25/234 (10%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEH-LKGNGQE 174
+PT++ + LK F +LG+G +GSV + G VAVK L+H + + ++
Sbjct: 1 DPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 55
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
F E+ + + H +IV+ G C RR L+ E++P GSL ++ H
Sbjct: 56 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--- 112
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
KL + + +G+EYL +R +H D+ NIL+++ + KI DFGL K+ +D
Sbjct: 113 --KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 167
Query: 293 IVSL-TAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDPA 344
+ + APE + + + S SDV+S+G++L E+ K+K P
Sbjct: 168 XXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSPP 219
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 39/223 (17%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSE 199
LGQG +G V + + + A+K + H + ++EV + ++H ++VR E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 200 GTRRALV---------------YEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
RR V E+ NG+L I S+ N + R W ++I
Sbjct: 74 --RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQIL---- 126
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV---------- 294
+ Y+H +Q I+H D+KP NI +D + KI DFGLAK + + I+
Sbjct: 127 EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 295 --SLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+LT+A GTA Y+A E+ G + K D+YS G++ EM+
Sbjct: 184 SDNLTSAIGTAMYVATEVLD-GTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 137 FKHRLGQGGYGSVFRGKLFNG----IPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHI 190
F +G+G +G V+ G L + I AVK L + G+ +F+ E + H ++
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 191 VRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARG 246
+ LLG C SEG+ +V +M +G L FI ++T++ + + L I FG VA+G
Sbjct: 112 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-------IGFGLQVAKG 163
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKD-ISIVSLTAARGTAG 304
++YL +++ +H D+ N +LD F K++DFGLA+ + K+ S+ + T A+
Sbjct: 164 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 220
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E S + + KSDV+S+G++L E++
Sbjct: 221 WMALE--SLQTQKFTTKSDVWSFGVLLWELM 249
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 25/233 (10%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEH-LKGNGQE 174
+PT++ + LK F +LG+G +GSV + G VAVK L+H + + ++
Sbjct: 9 DPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 63
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
F E+ + + H +IV+ G C RR L+ E++P GSL ++ H
Sbjct: 64 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--- 120
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
KL + + +G+EYL +R +H D+ NIL+++ + KI DFGL K+ +D
Sbjct: 121 --KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 175
Query: 293 IVSL-TAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDP 343
+ + APE + + + S SDV+S+G++L E+ K+K P
Sbjct: 176 XXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSP 226
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 25/234 (10%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEH-LKGNGQE 174
+PT++ + LK F +LG+G +GSV + G VAVK L+H + + ++
Sbjct: 3 DPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 57
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
F E+ + + H +IV+ G C RR L+ E++P GSL ++ H
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--- 114
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
KL + + +G+EYL +R +H D+ NIL+++ + KI DFGL K+ +D
Sbjct: 115 --KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
Query: 293 IVSLT-AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDPA 344
+ + APE + + + S SDV+S+G++L E+ K+K P
Sbjct: 170 XXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSPP 221
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 112/216 (51%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K + VAVKML + + + + ++E+ + I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK----------TNSSSHRPLSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ N ++++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
+ +ARG+EYL +Q+ +H D+ N+L+ N KI+DFGLA+ + + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 25/234 (10%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEH-LKGNGQE 174
+PT++ + LK F +LG+G +GSV + G VAVK L+H + + ++
Sbjct: 6 DPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 60
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
F E+ + + H +IV+ G C RR L+ E++P GSL ++ H
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--- 117
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
KL + + +G+EYL +R +H D+ NIL+++ + KI DFGL K+ +D
Sbjct: 118 --KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
Query: 293 IVSL-TAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDPA 344
+ + APE + + + S SDV+S+G++L E+ K+K P
Sbjct: 173 XXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSPP 224
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 137 FKHRLGQGGYGSVFRGKLFNG----IPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHI 190
F +G+G +G V+ G L + I AVK L + G+ +F+ E + H ++
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 191 VRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARG 246
+ LLG C SEG+ +V +M +G L FI ++T++ + + L I FG VA+G
Sbjct: 89 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-------IGFGLQVAKG 140
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKD-ISIVSLTAARGTAG 304
++YL +++ +H D+ N +LD F K++DFGLA+ + K+ S+ + T A+
Sbjct: 141 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E S + + KSDV+S+G++L E++
Sbjct: 198 WMALE--SLQTQKFTTKSDVWSFGVLLWELM 226
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 119/233 (51%), Gaps = 20/233 (8%)
Query: 113 FLEDYRTVNPTRYTY---KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKML 165
+++ + +PT+ + KEL +G G +G V G+L I VA+K L
Sbjct: 22 YVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 81
Query: 166 E--HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKT 223
+ + + ++F+ E + +G+ H +I+RL G ++ +V E M NGSL+ F+ +
Sbjct: 82 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RK 139
Query: 224 NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL 283
+ + + +L + G+A G++YL + +H D+ NIL++ N K+SDFGL
Sbjct: 140 HDAQFTVI---QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 284 AKLCSKDISIVSLT-AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+++ D T + + +PE + + + + SDV+SYG++L E++
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 244
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 130 LKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQEFINEVAT 181
LK+ K LG G +G+V++G IPVA+K L K N +E ++E
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYV 64
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLSWEKLKKIA 240
+ + + H+ RLLG C T + L+ + MP G L ++ K N S L+W
Sbjct: 65 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 117
Query: 241 FGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR 300
+A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL + +
Sbjct: 118 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 301 GTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E + R + +++SDV+SYG+ + E++
Sbjct: 175 VPIKWMALESILHRIY---THQSDVWSYGVTVWELM 207
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 137 FKHRLGQGGYGSVFRGKLFNG----IPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHI 190
F +G+G +G V+ G L + I AVK L + G+ +F+ E + H ++
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 191 VRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARG 246
+ LLG C SEG+ +V +M +G L FI ++T++ + + L I FG VA+G
Sbjct: 95 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-------IGFGLQVAKG 146
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDI-SIVSLTAARGTAG 304
+++L +++ +H D+ N +LD F K++DFGLA+ + K+ S+ + T A+
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK 203
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E S + + KSDV+S+G++L E++
Sbjct: 204 WMALE--SLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 25/234 (10%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEH-LKGNGQE 174
+PT++ + LK F +LG+G +GSV + G VAVK L+H + + ++
Sbjct: 3 DPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 57
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
F E+ + + H +IV+ G C RR L+ E++P GSL ++ H
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--- 114
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
KL + + +G+EYL +R +H D+ NIL+++ + KI DFGL K+ +D
Sbjct: 115 --KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
Query: 293 IVSLT-AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDPA 344
+ + APE + + + S SDV+S+G++L E+ K+K P
Sbjct: 170 XXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSPP 221
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 25/233 (10%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEH-LKGNGQE 174
+PT++ + LK F +LG+G +GSV + G VAVK L+H + + ++
Sbjct: 8 DPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 62
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
F E+ + + H +IV+ G C RR L+ E++P GSL ++ H
Sbjct: 63 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--- 119
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
KL + + +G+EYL +R +H D+ NIL+++ + KI DFGL K+ +D
Sbjct: 120 --KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 174
Query: 293 IVSL-TAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDP 343
+ + APE + + + S SDV+S+G++L E+ K+K P
Sbjct: 175 XXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSP 225
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 16/198 (8%)
Query: 140 RLGQGGYGSV-FRGKLFNGIPVAVKMLEHLKGNGQEFI-NEVATIGRIHHFHIVRLLGFC 197
++G+G G V + +G VAVKM++ K +E + NEV + HF++V +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
G ++ EF+ G+L T+ S L+ E++ + V + + YLH Q
Sbjct: 112 LVGEELWVLMEFLQGGAL-------TDIVSQVRLNEEQIATVCEAVLQALAYLH---AQG 161
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
++H DIK +ILL + + K+SDFG SKD+ GT ++APE+ SR+
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--KRKXLVGTPYWMAPEVISRSL-- 217
Query: 318 VSYKSDVYSYGMMLLEMV 335
+ + D++S G+M++EMV
Sbjct: 218 YATEVDIWSLGIMVIEMV 235
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 31/236 (13%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEHLKGNGQ-EF 175
PT + + LK I+ +LG+G +GSV + G VAVK L+H + Q +F
Sbjct: 1 PTIFEERHLKYIS-----QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 55
Query: 176 INEVATIGRIHHFHIVRLLGFCSEGTRRA---LVYEFMPNGSLEKFIFSKTNSSSHRP-L 231
E+ + +H IV+ G S G R LV E++P+G L F+ HR L
Sbjct: 56 QREIQILKALHSDFIVKYRGV-SYGPGRPELRLVMEYLPSGCLRDFL------QRHRARL 108
Query: 232 SWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKL--CSK 289
+L + + +G+EYL ++R +H D+ NIL++ KI+DFGLAKL K
Sbjct: 109 DASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 165
Query: 290 DISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDPA 344
D +V + + APE S N S +SDV+S+G++L E+ C K+ P+
Sbjct: 166 DXXVVR-EPGQSPIFWYAPESLSDNI--FSRQSDVWSFGVVLYELFTYCDKSCSPS 218
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 139 HRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQE---FINEVATIGRIHHFHIVRLLG 195
R+G G +G+V++GK VAVKML Q+ F NEV + + H +I+ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ ++ + A+V ++ SL + KL IA A+G++YLH
Sbjct: 72 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA--- 122
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS-RN 314
+ I+H D+K +NI L + KI DFGLA S+ G+ ++APE+ ++
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
S++SDVY++G++L E++
Sbjct: 183 KNPYSFQSDVYAFGIVLYELM 203
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 25/234 (10%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEH-LKGNGQE 174
+PT++ + LK F +LG+G +GSV + G VAVK L+H + + ++
Sbjct: 7 DPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 61
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
F E+ + + H +IV+ G C RR L+ E++P GSL ++ H
Sbjct: 62 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--- 118
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
KL + + +G+EYL +R +H D+ NIL+++ + KI DFGL K+ +D
Sbjct: 119 --KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 173
Query: 293 IVSL-TAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDPA 344
+ + APE + + + S SDV+S+G++L E+ K+K P
Sbjct: 174 XXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSPP 225
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 139 HRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQE---FINEVATIGRIHHFHIVRLLG 195
R+G G +G+V++GK VAVKML Q+ F NEV + + H +I+ +G
Sbjct: 34 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ ++ + A+V ++ SL + KL IA A+G++YLH
Sbjct: 92 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA--- 142
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS-RN 314
+ I+H D+K +NI L + KI DFGLA S+ G+ ++APE+ ++
Sbjct: 143 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
S++SDVY++G++L E++
Sbjct: 203 KNPYSFQSDVYAFGIVLYELM 223
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 25/233 (10%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEH-LKGNGQE 174
+PT++ + LK F +LG+G +GSV + G VAVK L+H + + ++
Sbjct: 10 DPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 64
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
F E+ + + H +IV+ G C RR L+ E++P GSL ++ H
Sbjct: 65 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--- 121
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
KL + + +G+EYL +R +H D+ NIL+++ + KI DFGL K+ +D
Sbjct: 122 --KLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 176
Query: 293 IVSL-TAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDP 343
+ + APE + + + S SDV+S+G++L E+ K+K P
Sbjct: 177 XXKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSP 227
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 27/210 (12%)
Query: 136 KFKHRLGQGGYGSVFRGKLF-NGIPVAVKMLEHLKGNG--------QEFINEVATIGRIH 186
+++ ++G+GG+G V +G+L + VA+K L G QEF EV + ++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 187 HFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
H +IV+L G R +V EF+P G L + K + P+ W ++ +A G
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRLMLDIALG 134
Query: 247 VEYLHQGCNQRILHFDIKPHNILL---DHNFQ--PKISDFGLAKLCSKDISIVSLTAARG 301
+EY+ Q N I+H D++ NI L D N K++DFGL++ S+ S++ G
Sbjct: 135 IEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ-----SVHSVSGLLG 188
Query: 302 TAGYIAPELFSRNFGEVSYKSDVYSYGMML 331
++APE + K+D YS+ M+L
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMIL 218
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 139 HRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQE---FINEVATIGRIHHFHIVRLLG 195
R+G G +G+V++GK VAVKML Q+ F NEV + + H +I+ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ ++ + A+V ++ SL + KL IA A+G++YLH
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA--- 150
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS-RN 314
+ I+H D+K +NI L + KI DFGLA S+ G+ ++APE+ ++
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
S++SDVY++G++L E++
Sbjct: 211 KNPYSFQSDVYAFGIVLYELM 231
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 17/215 (7%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKMLE--HLKGNGQEFINEVAT 181
KEL +G G +G V G+L I VA+K L+ + + ++F+ E +
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAF 241
+G+ H +I+RL G ++ +V E M NGSL+ F+ + + + + +L +
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVI---QLVGMLR 125
Query: 242 GVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT-AAR 300
G+A G++YL + +H D+ NIL++ N K+SDFGL+++ D T +
Sbjct: 126 GIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 301 GTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ +PE + + + + SDV+SYG++L E++
Sbjct: 183 IPIRWTSPEAIA--YRKFTSASDVWSYGIVLWEVM 215
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K + VAVKML + + + + ++E+ + I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK----------TNSSSHRPLSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ N ++++ L
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
+ +ARG+EYL +Q+ +H D+ N+L+ N KI+DFGLA+ + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 17/199 (8%)
Query: 141 LGQGGYGSVFRGKLF---NGIPVAVKMLEH--LKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG G +GSV +G I VA+K+L+ K + +E + E + ++ + +IVRL+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
C + LV E G L KF+ K P+S + ++ V+ G++YL +
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKREEI---PVS--NVAELLHQVSMGMKYLEE--- 128
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDISIVSLTAARGTAGYIAPELFSRN 314
+ +H D+ N+LL + KISDFGL+K L + D + +A + + APE N
Sbjct: 129 KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI--N 186
Query: 315 FGEVSYKSDVYSYGMMLLE 333
F + S +SDV+SYG+ + E
Sbjct: 187 FRKFSSRSDVWSYGVTMWE 205
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K + VAVKML + + + + ++E+ + I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK----------TNSSSHRPLSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ N ++++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
+ +ARG+EYL +Q+ +H D+ N+L+ N KI+DFGLA+ + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K + VAVKML + + + + ++E+ + I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK----------TNSSSHRPLSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ N ++++ L
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
+ +ARG+EYL +Q+ +H D+ N+L+ N KI+DFGLA+ + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 18/199 (9%)
Query: 140 RLGQGGYGSV-FRGKLFNGIPVAVKMLEHLKGNGQEFI-NEVATIGRIHHFHIVRLLGFC 197
++G+G G V + G VAVK ++ K +E + NEV + HH ++V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
G +V EF+ G+L T+ +H ++ E++ + V R + YLH NQ
Sbjct: 112 LVGDELWVVMEFLEGGAL-------TDIVTHTRMNEEQIATVCLSVLRALSYLH---NQG 161
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR-NFG 316
++H DIK +ILL + + K+SDFG SK++ GT ++APE+ SR +G
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--KRKXLVGTPYWMAPEVISRLPYG 219
Query: 317 EVSYKSDVYSYGMMLLEMV 335
+ D++S G+M++EM+
Sbjct: 220 T---EVDIWSLGIMVIEMI 235
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 137 FKHRLGQGGYGSVFRGKLFNG----IPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHI 190
F +G+G +G V+ G L + I AVK L + G+ +F+ E + H ++
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 191 VRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARG 246
+ LLG C SEG+ +V +M +G L FI ++T++ + + L I FG VA+G
Sbjct: 94 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-------IGFGLQVAKG 145
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDI-SIVSLTAARGTAG 304
+++L +++ +H D+ N +LD F K++DFGLA+ + K+ S+ + T A+
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E S + + KSDV+S+G++L E++
Sbjct: 203 WMALE--SLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 137 FKHRLGQGGYGSVFRGKLFNG----IPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHI 190
F +G+G +G V+ G L + I AVK L + G+ +F+ E + H ++
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 191 VRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARG 246
+ LLG C SEG+ +V +M +G L FI ++T++ + + L I FG VA+G
Sbjct: 92 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-------IGFGLQVAKG 143
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDI-SIVSLTAARGTAG 304
+++L +++ +H D+ N +LD F K++DFGLA+ + K+ S+ + T A+
Sbjct: 144 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E S + + KSDV+S+G++L E++
Sbjct: 201 WMALE--SLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 137 FKHRLGQGGYGSVFRGKLFNG----IPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHI 190
F +G+G +G V+ G L + I AVK L + G+ +F+ E + H ++
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 191 VRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARG 246
+ LLG C SEG+ +V +M +G L FI ++T++ + + L I FG VA+G
Sbjct: 95 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-------IGFGLQVAKG 146
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDI-SIVSLTAARGTAG 304
+++L +++ +H D+ N +LD F K++DFGLA+ + K+ S+ + T A+
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E S + + KSDV+S+G++L E++
Sbjct: 204 WMALE--SLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K L G +G+V++G IPVA+K L K N +
Sbjct: 11 PNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 69
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 70 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN 128
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 129 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 179
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 180 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 220
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K VAVKML + + + + I+E+ + I H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK-------TNSSSHRP---LSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ + + SH P LS + L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
A+ VARG+EYL +++ +H D+ N+L+ + KI+DFGLA+ T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G++L E+
Sbjct: 213 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K VAVKML + + + + I+E+ + I H +
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK-------TNSSSHRP---LSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ + + SH P LS + L
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
A+ VARG+EYL +++ +H D+ N+L+ + KI+DFGLA+ T
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G++L E+
Sbjct: 206 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 238
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K VAVKML + + + + I+E+ + I H +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK-------TNSSSHRP---LSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ + + SH P LS + L
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
A+ VARG+EYL +++ +H D+ N+L+ + KI+DFGLA+ T
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G++L E+
Sbjct: 202 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 234
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 24/216 (11%)
Query: 130 LKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQEFINEVAT 181
LK+ K LG G +G+V++G IPVA+K L K N +E ++E
Sbjct: 9 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYV 67
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLSWEKLKKIA 240
+ + + H+ RLLG C T + L+ + MP G L ++ K N S L+W
Sbjct: 68 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 120
Query: 241 FGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR 300
+A G+ YL ++R++H D+ N+L+ KI+DFGLAKL + +
Sbjct: 121 VQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 301 GTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E + R + +++SDV+SYG+ + E++
Sbjct: 178 VPIKWMALESILHRIY---THQSDVWSYGVTVWELM 210
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 137 FKHRLGQGGYGSVFRGKLFNG----IPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHI 190
F +G+G +G V+ G L + I AVK L + G+ +F+ E + H ++
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 191 VRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARG 246
+ LLG C SEG+ +V +M +G L FI ++T++ + + L I FG VA+G
Sbjct: 99 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-------IGFGLQVAKG 150
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDI-SIVSLTAARGTAG 304
+++L +++ +H D+ N +LD F K++DFGLA+ + K+ S+ + T A+
Sbjct: 151 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E S + + KSDV+S+G++L E++
Sbjct: 208 WMALE--SLQTQKFTTKSDVWSFGVLLWELM 236
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+ L K N +
Sbjct: 38 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKAN-K 96
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 97 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN 155
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 156 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 206
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 207 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 247
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 137 FKHRLGQGGYGSVFRGKLFNG----IPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHI 190
F +G+G +G V+ G L + I AVK L + G+ +F+ E + H ++
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 191 VRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARG 246
+ LLG C SEG+ +V +M +G L FI ++T++ + + L I FG VA+G
Sbjct: 153 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-------IGFGLQVAKG 204
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDI-SIVSLTAARGTAG 304
+++L +++ +H D+ N +LD F K++DFGLA+ + K+ S+ + T A+
Sbjct: 205 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E S + + KSDV+S+G++L E++
Sbjct: 262 WMALE--SLQTQKFTTKSDVWSFGVLLWELM 290
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K VAVKML + + + + I+E+ + I H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK-------TNSSSHRP---LSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ + + SH P LS + L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
A+ VARG+EYL +++ +H D+ N+L+ + KI+DFGLA+ T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G++L E+
Sbjct: 213 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 137 FKHRLGQGGYGSVFRGKLFNG----IPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHI 190
F +G+G +G V+ G L + I AVK L + G+ +F+ E + H ++
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 191 VRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARG 246
+ LLG C SEG+ +V +M +G L FI ++T++ + + L I FG VA+G
Sbjct: 94 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-------IGFGLQVAKG 145
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDI-SIVSLTAARGTAG 304
+++L +++ +H D+ N +LD F K++DFGLA+ + K+ S+ + T A+
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++A E S + + KSDV+S+G++L E++
Sbjct: 203 WMALE--SLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 64
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 65 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN 123
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFG AKL +
Sbjct: 124 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 174
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 175 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 215
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K VAVKML + + + + I+E+ + I H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK-------TNSSSHRP---LSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ + + SH P LS + L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
A+ VARG+EYL +++ +H D+ N+L+ + KI+DFGLA+ T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G++L E+
Sbjct: 213 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 64
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 65 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN 123
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFG AKL +
Sbjct: 124 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 174
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 175 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 215
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 8 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 66
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 67 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLN 125
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFG AKL +
Sbjct: 126 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 176
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 177 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 217
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K VAVKML + + + + I+E+ + I H +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK-------TNSSSHRP---LSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ + + SH P LS + L
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
A+ VARG+EYL +++ +H D+ N+L+ + KI+DFGLA+ T
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G++L E+
Sbjct: 205 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 237
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K + VAVKML + + + + ++E+ + I H +
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK----------TNSSSHRPLSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ N ++++ L
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
+ +ARG+EYL +Q+ +H D+ N+L+ N KI+DFGLA+ + T
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G+++ E+
Sbjct: 266 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 298
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K L G +G+V++G IPVA+K L K N +
Sbjct: 11 PNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 69
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 70 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN 128
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 129 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 179
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 180 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 220
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K L G +G+V++G IPVA+K L K N +
Sbjct: 4 PNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 62
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN 121
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFGLAKL +
Sbjct: 122 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 173 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 213
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 111/216 (51%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K + VAVKML + + + + ++E+ + I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK----------TNSSSHRPLSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ N ++++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
+ +ARG+EYL +Q+ +H D+ N+L+ N +I+DFGLA+ + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K + VAVKML + + + + ++E+ + I H +
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK----------TNSSSHRPLSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ N ++++ L
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
+ +ARG+EYL +Q+ +H D+ N+L+ N KI+DFGLA+ + T
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G+++ E+
Sbjct: 207 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 239
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 62
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN 121
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFG AKL +
Sbjct: 122 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 172
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 173 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 213
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K + VAVKML + + + + ++E+ + I H +
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK----------TNSSSHRPLSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ N ++++ L
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
+ +ARG+EYL +Q+ +H D+ N+L+ N KI+DFGLA+ + T
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G+++ E+
Sbjct: 212 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 244
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K + VAVKML + + + + ++E+ + I H +
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK----------TNSSSHRPLSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ N ++++ L
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
+ +ARG+EYL +Q+ +H D+ N+L+ N KI+DFGLA+ + T
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G+++ E+
Sbjct: 209 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 241
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 64
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 65 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN 123
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFG AKL +
Sbjct: 124 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 174
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 175 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 215
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHL---KGNGQ 173
P + + LK+ K LG G +G+V++G IPVA+K L K N +
Sbjct: 11 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-K 69
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS-KTNSSSHRPLS 232
E ++E + + + H+ RLLG C T + L+ + MP G L ++ K N S L+
Sbjct: 70 EILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLN 128
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL ++R++H D+ N+L+ KI+DFG AKL +
Sbjct: 129 W------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 179
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R + +++SDV+SYG+ + E++
Sbjct: 180 EYHAEGGKVPIKWMALESILHRIY---THQSDVWSYGVTVWELM 220
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 112/216 (51%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K VAVKML + + + + I+E+ + I H +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTN-------SSSHRP---LSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ + SH P LS + L
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
A+ VARG+EYL +++ +H D+ N+L+ + KI+DFGLA+ T
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G++L E+
Sbjct: 198 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 230
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 116/250 (46%), Gaps = 29/250 (11%)
Query: 117 YRTVNPTRYTYKE---LKKITSKFKHRLGQGGYGSVFRGKLFN------GIPVAVKMLEH 167
Y ++PT+ Y E + +F LG G +G V F + VAVKML+
Sbjct: 27 YTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS 86
Query: 168 LK--GNGQEFINEVATIGRI-HHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK-- 222
+ ++E+ + + H +IV LLG C+ G ++ E+ G L F+ K
Sbjct: 87 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRP 146
Query: 223 -----TNSSSHRP---LSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF 274
+ + SH P LS L + VA+G+ +L ++ +H D+ N+LL +
Sbjct: 147 PGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGH 203
Query: 275 QPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLE 333
KI DFGLA+ D + + AR ++APE +F + + +SDV+SYG++L E
Sbjct: 204 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWE 260
Query: 334 MVGCRKNKDP 343
+ N P
Sbjct: 261 IFSLGLNPYP 270
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 112/216 (51%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K VAVKML + + + + I+E+ + I H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTN-------SSSHRP---LSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ + SH P LS + L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
A+ VARG+EYL +++ +H D+ N+L+ + KI+DFGLA+ T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G++L E+
Sbjct: 213 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 141 LGQGGYGSVFRGKLFNGIP------VAVKMLEHLKGNGQ--EFINEVATIGRIHHFHIVR 192
LGQG +G V+ G + I VAVK + + EF+NE + + H+VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 193 LLGFCSEGTRRALVYEFMPNGSLEKFIFS----KTNSSSHRPLSWEKLKKIAFGVARGVE 248
LLG S+G +V E M +G L+ ++ S N+ P + +++ ++A +A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARG----TAG 304
YL+ ++ +H D+ N ++ H+F KI DFG+ ++DI G
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGM----TRDIXETDXXRKGGKGLLPVR 197
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
++APE S G + SD++S+G++L E+
Sbjct: 198 WMAPE--SLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 141 LGQGGYGSVFRGKLFNGIP------VAVKMLEHLKGNGQ--EFINEVATIGRIHHFHIVR 192
LGQG +G V+ G + I VAVK + + EF+NE + + H+VR
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 193 LLGFCSEGTRRALVYEFMPNGSLEKFIFS----KTNSSSHRPLSWEKLKKIAFGVARGVE 248
LLG S+G +V E M +G L+ ++ S N+ P + +++ ++A +A G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARG----TAG 304
YL+ ++ +H D+ N ++ H+F KI DFG+ ++DI G
Sbjct: 142 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGM----TRDIXETDXXRKGGKGLLPVR 194
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
++APE S G + SD++S+G++L E+
Sbjct: 195 WMAPE--SLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 141 LGQGGYGSVFRGKLFNGIP------VAVKMLEHLKGNGQ--EFINEVATIGRIHHFHIVR 192
LGQG +G V+ G + I VAVK + + EF+NE + + H+VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 193 LLGFCSEGTRRALVYEFMPNGSLEKFIFS----KTNSSSHRPLSWEKLKKIAFGVARGVE 248
LLG S+G +V E M +G L+ ++ S N+ P + +++ ++A +A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARG----TAG 304
YL+ ++ +H D+ N ++ H+F KI DFG+ ++DI G
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGM----TRDIXETDXXRKGGKGLLPVR 197
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
++APE S G + SD++S+G++L E+
Sbjct: 198 WMAPE--SLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 17/201 (8%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
F LG G +G V GK VA+KM++ + EFI E + + H +V+L G
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
C++ ++ E+M NG L ++ HR ++L ++ V +EYL ++
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYL----REMRHR-FQTQQLLEMCKDVCEAMEYLE---SK 124
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGT---AGYIAPELFSR 313
+ LH D+ N L++ K+SDFGL++ D T++RG+ + PE+
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD----EYTSSRGSKFPVRWSPPEVLM- 179
Query: 314 NFGEVSYKSDVYSYGMMLLEM 334
+ + S KSD++++G+++ E+
Sbjct: 180 -YSKFSSKSDIWAFGVLMWEI 199
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K VAVKML + + + + I+E+ + I H +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK-------TNSSSHRP---LSWEKLKKI 239
I+ LLG C++ ++ E+ G+L +++ ++ + + SH P LS + L
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
A+ VARG+EYL +++ +H D+ N+L+ + KI+DFGLA+ T
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G++L E+
Sbjct: 254 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 286
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 20/218 (9%)
Query: 136 KFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEH-LKGNGQEFINEVATIGRIHHFH 189
KF +LG+G +GSV + G VAVK L+H + + ++F E+ + + H +
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 190 IVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
IV+ G C RR L+ E++P GSL ++ H KL + + +G+
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-----KLLQYTSQICKGM 145
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT-AARGTAGYI 306
EYL +R +H D+ NIL+++ + KI DFGL K+ +D + +
Sbjct: 146 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDP 343
APE + + + S SDV+S+G++L E+ K+K P
Sbjct: 203 APESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSP 238
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 136 KFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEH-LKGNGQEFINEVATIGRIHHFH 189
KF +LG+G +GSV + G VAVK L+H + + ++F E+ + + H +
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 190 IVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
IV+ G C RR L+ E++P GSL ++ H KL + + +G+
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-----KLLQYTSQICKGM 145
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT-AARGTAGYI 306
EYL +R +H D+ NIL+++ + KI DFGL K+ +D + +
Sbjct: 146 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDPA 344
APE + + + S SDV+S+G++L E+ K+K P
Sbjct: 203 APESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSPP 239
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 125/258 (48%), Gaps = 35/258 (13%)
Query: 105 ETQLKVEKFLE--DYRTVNPTRYTYK---ELKKITSKFKHRLGQGGYGSVFRGKLFN--- 156
E Q KV + + +Y ++PT+ Y E + F LG G +G V +
Sbjct: 8 EVQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIK 67
Query: 157 ---GIPVAVKMLE---HLKGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGTRRALVYEF 209
+ VAVKML+ HL + ++E+ + + +H +IV LLG C+ G ++ E+
Sbjct: 68 SDAAMTVAVKMLKPSAHLTER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY 126
Query: 210 MPNGSL--------EKFIFSKTNSS----SHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
G L + FI SKT+ + L E L ++ VA+G+ +L ++
Sbjct: 127 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKN 183
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFG 316
+H D+ NILL H KI DFGLA+ D + V AR ++APE +F+ +
Sbjct: 184 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY- 242
Query: 317 EVSYKSDVYSYGMMLLEM 334
+++SDV+SYG+ L E+
Sbjct: 243 --TFESDVWSYGIFLWEL 258
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 125/258 (48%), Gaps = 35/258 (13%)
Query: 105 ETQLKVEKFLE--DYRTVNPTRYTYK---ELKKITSKFKHRLGQGGYGSVFRGKLFN--- 156
E Q KV + + +Y ++PT+ Y E + F LG G +G V +
Sbjct: 13 EVQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIK 72
Query: 157 ---GIPVAVKMLE---HLKGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGTRRALVYEF 209
+ VAVKML+ HL + ++E+ + + +H +IV LLG C+ G ++ E+
Sbjct: 73 SDAAMTVAVKMLKPSAHLTER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY 131
Query: 210 MPNGSL--------EKFIFSKTNSS----SHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
G L + FI SKT+ + L E L ++ VA+G+ +L ++
Sbjct: 132 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKN 188
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFG 316
+H D+ NILL H KI DFGLA+ D + V AR ++APE +F+ +
Sbjct: 189 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY- 247
Query: 317 EVSYKSDVYSYGMMLLEM 334
+++SDV+SYG+ L E+
Sbjct: 248 --TFESDVWSYGIFLWEL 263
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 136 KFKHRLGQGGYGSVFRGKLF-NGIPVAVKMLEHLKGNG--------QEFINEVATIGRIH 186
+++ ++G+GG+G V +G+L + VA+K L G QEF EV + ++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 187 HFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
H +IV+L G R +V EF+P G L + K + P+ W ++ +A G
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRLMLDIALG 134
Query: 247 VEYLHQGCNQRILHFDIKPHNILL---DHNFQ--PKISDFGLAKLCSKDISIVSLTAARG 301
+EY+ Q N I+H D++ NI L D N K++DFG ++ S+ S++ G
Sbjct: 135 IEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ-----SVHSVSGLLG 188
Query: 302 TAGYIAPELFSRNFGEVSYKSDVYSYGMML 331
++APE + K+D YS+ M+L
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMIL 218
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 136 KFKHRLGQGGYGSVFRGKLF-NGIPVAVKMLEHLKGNG--------QEFINEVATIGRIH 186
+++ ++G+GG+G V +G+L + VA+K L G QEF EV + ++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 187 HFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
H +IV+L G R +V EF+P G L + K + P+ W ++ +A G
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRLMLDIALG 134
Query: 247 VEYLHQGCNQRILHFDIKPHNILL---DHNFQ--PKISDFGLAKLCSKDISIVSLTAARG 301
+EY+ Q N I+H D++ NI L D N K++DF L++ S+ S++ G
Sbjct: 135 IEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ-----SVHSVSGLLG 188
Query: 302 TAGYIAPELFSRNFGEVSYKSDVYSYGMML 331
++APE + K+D YS+ M+L
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMIL 218
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 125/258 (48%), Gaps = 35/258 (13%)
Query: 105 ETQLKVEKFLE--DYRTVNPTRYTYK---ELKKITSKFKHRLGQGGYGSVFRGKLFN--- 156
E Q KV + + +Y ++PT+ Y E + F LG G +G V +
Sbjct: 13 EVQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIK 72
Query: 157 ---GIPVAVKMLE---HLKGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGTRRALVYEF 209
+ VAVKML+ HL + ++E+ + + +H +IV LLG C+ G ++ E+
Sbjct: 73 SDAAMTVAVKMLKPSAHLTER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY 131
Query: 210 MPNGSL--------EKFIFSKTNSS----SHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
G L + FI SKT+ + L E L ++ VA+G+ +L ++
Sbjct: 132 CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKN 188
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFG 316
+H D+ NILL H KI DFGLA+ D + V AR ++APE +F+ +
Sbjct: 189 CIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVY- 247
Query: 317 EVSYKSDVYSYGMMLLEM 334
+++SDV+SYG+ L E+
Sbjct: 248 --TFESDVWSYGIFLWEL 263
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 115/234 (49%), Gaps = 25/234 (10%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEH-LKGNGQE 174
+PT++ + LK F +LG+G +GSV + G VAVK L+H + + ++
Sbjct: 4 DPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 58
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
F E+ + + H +IV+ G C RR L+ E++P GSL ++ H
Sbjct: 59 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--- 115
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
KL + + +G+EYL +R +H ++ NIL+++ + KI DFGL K+ +D
Sbjct: 116 --KLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKE 170
Query: 293 IVSL-TAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDPA 344
+ + APE + + + S SDV+S+G++L E+ K+K P
Sbjct: 171 YYKVKEPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSPP 222
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKG-------NGQEFINEVA 180
+ +K+ K LG+G +G VF + +N P KML +K ++F E
Sbjct: 10 QHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAE 69
Query: 181 TIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSS----------SHRP 230
+ + H HIV+ G C +G +V+E+M +G L KF+ + + +
Sbjct: 70 LLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 129
Query: 231 LSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD 290
L ++ IA +A G+ YL +Q +H D+ N L+ N KI DFG+ S+D
Sbjct: 130 LGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGM----SRD 182
Query: 291 ISIVSLTAARG----TAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
+ G ++ PE S + + + +SDV+S+G++L E+
Sbjct: 183 VYSTDYYRVGGHTMLPIRWMPPE--SIMYRKFTTESDVWSFGVILWEI 228
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 36/257 (14%)
Query: 117 YRTVNPTRYTYKE---LKKITSKFKHRLGQGGYGSVFRGKLFN------GIPVAVKMLEH 167
Y ++PT+ Y E + +F LG G +G V F + VAVKML+
Sbjct: 12 YTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS 71
Query: 168 LK--GNGQEFINEVATIGRI-HHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKT- 223
+ ++E+ + + H +IV LLG C+ G ++ E+ G L F+ K
Sbjct: 72 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAE 131
Query: 224 ----------------NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
+ RPL L + VA+G+ +L ++ +H D+ N
Sbjct: 132 AMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARN 188
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+LL + KI DFGLA+ D + + AR ++APE +F + + +SDV+S
Sbjct: 189 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY---TVQSDVWS 245
Query: 327 YGMMLLEMVGCRKNKDP 343
YG++L E+ N P
Sbjct: 246 YGILLWEIFSLGLNPYP 262
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 110/216 (50%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K + VAVKML + + + + ++E+ + I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK----------TNSSSHRPLSWEKLKKI 239
I+ LLG C++ ++ + G+L +++ ++ N ++++ L
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
+ +ARG+EYL +Q+ +H D+ N+L+ N KI+DFGLA+ + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 113/248 (45%), Gaps = 27/248 (10%)
Query: 117 YRTVNPTRYTYKE---LKKITSKFKHRLGQGGYGSVFRGKLFN------GIPVAVKMLEH 167
Y ++PT+ Y E + +F LG G +G V F + VAVKML+
Sbjct: 27 YTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS 86
Query: 168 LK--GNGQEFINEVATIGRI-HHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTN 224
+ ++E+ + + H +IV LLG C+ G ++ E+ G L F+ K+
Sbjct: 87 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSR 146
Query: 225 SSSHRP--------LSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQP 276
P LS L + VA+G+ +L ++ +H D+ N+LL +
Sbjct: 147 VLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVA 203
Query: 277 KISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
KI DFGLA+ D + + AR ++APE +F + + +SDV+SYG++L E+
Sbjct: 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWEIF 260
Query: 336 GCRKNKDP 343
N P
Sbjct: 261 SLGLNPYP 268
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 118/236 (50%), Gaps = 20/236 (8%)
Query: 110 VEKFLEDYRTVNP---TRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAV 162
V F++ + +P R KE+ K + +G G +G V G+L I VA+
Sbjct: 3 VRTFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAI 62
Query: 163 KMLE--HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIF 220
K L+ + ++F++E + +G+ H +I+ L G ++ ++ E+M NGSL+ F+
Sbjct: 63 KTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL- 121
Query: 221 SKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISD 280
+ N + +L + G+ G++YL + +H D+ NIL++ N K+SD
Sbjct: 122 -RKNDGRFTVI---QLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSD 174
Query: 281 FGLAKLCSKDISIVSLT-AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
FG++++ D T + + APE + + + + SDV+SYG+++ E++
Sbjct: 175 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVM 228
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 26/235 (11%)
Query: 120 VNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEHLKGNGQ- 173
V+PT + + LK+I LG+G +G V + G VAVK L+ G
Sbjct: 13 VDPTHFEKRFLKRIRD-----LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI 67
Query: 174 -EFINEVATIGRIHHFHIVRLLGFCSE--GTRRALVYEFMPNGSLEKFIFSKTNSSSHRP 230
+ E+ + ++H +IV+ G C+E G L+ EF+P+GSL++++ N
Sbjct: 68 ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK----- 122
Query: 231 LSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD 290
++ ++ K A + +G++YL G Q + H D+ N+L++ Q KI DFGL K D
Sbjct: 123 INLKQQLKYAVQICKGMDYL--GSRQYV-HRDLAARNVLVESEHQVKIGDFGLTKAIETD 179
Query: 291 ISIVSLTAARGTAG-YIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDP 343
++ R + + APE ++ ++ SDV+S+G+ L E++ C + P
Sbjct: 180 KEXXTVKDDRDSPVFWYAPECLMQSKFYIA--SDVWSFGVTLHELLTYCDSDSSP 232
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
F LG G +G V GK VA+KM++ + EFI E + + H +V+L G
Sbjct: 12 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
C++ ++ E+M NG L ++ HR ++L ++ V +EYL ++
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYL----REMRHR-FQTQQLLEMCKDVCEAMEYLE---SK 123
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
+ LH D+ N L++ K+SDFGL++ D S ++ + PE+ +
Sbjct: 124 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVLM--YS 180
Query: 317 EVSYKSDVYSYGMMLLEM 334
+ S KSD++++G+++ E+
Sbjct: 181 KFSSKSDIWAFGVLMWEI 198
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 26/235 (11%)
Query: 120 VNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF-----NGIPVAVKMLEHLKGNGQ- 173
V+PT + + LK+I LG+G +G V + G VAVK L+ G
Sbjct: 1 VDPTHFEKRFLKRIRD-----LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI 55
Query: 174 -EFINEVATIGRIHHFHIVRLLGFCSE--GTRRALVYEFMPNGSLEKFIFSKTNSSSHRP 230
+ E+ + ++H +IV+ G C+E G L+ EF+P+GSL++++ N
Sbjct: 56 ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK----- 110
Query: 231 LSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD 290
++ ++ K A + +G++YL G Q + H D+ N+L++ Q KI DFGL K D
Sbjct: 111 INLKQQLKYAVQICKGMDYL--GSRQYV-HRDLAARNVLVESEHQVKIGDFGLTKAIETD 167
Query: 291 ISIVSLTAARGTAG-YIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDP 343
++ R + + APE ++ ++ SDV+S+G+ L E++ C + P
Sbjct: 168 KEXXTVKDDRDSPVFWYAPECLMQSKFYIA--SDVWSFGVTLHELLTYCDSDSSP 220
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
F LG G +G V GK VA+KM++ + EFI E + + H +V+L G
Sbjct: 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
C++ ++ E+M NG L ++ HR ++L ++ V +EYL ++
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYL----REMRHR-FQTQQLLEMCKDVCEAMEYLE---SK 119
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
+ LH D+ N L++ K+SDFGL++ D S ++ + PE+ +
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVLM--YS 176
Query: 317 EVSYKSDVYSYGMMLLEM 334
+ S KSD++++G+++ E+
Sbjct: 177 KFSSKSDIWAFGVLMWEI 194
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 39/223 (17%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSE 199
LGQG +G V + + + A+K + H + ++EV + ++H ++VR E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 200 GTRRALV---------------YEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
RR V E+ N +L I S+ N + R W ++I
Sbjct: 74 --RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE-NLNQQRDEYWRLFRQIL---- 126
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV---------- 294
+ Y+H +Q I+H D+KP NI +D + KI DFGLAK + + I+
Sbjct: 127 EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 295 --SLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+LT+A GTA Y+A E+ G + K D+YS G++ EM+
Sbjct: 184 SDNLTSAIGTAMYVATEVLD-GTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 33/231 (14%)
Query: 141 LGQGGYGSVFRGKLFN------GIPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHIVR 192
LG+G +G V + F+ VAVKML+ + + ++E + +++H H+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 193 LLGFCSEGTRRALVYEFMPNGSLEKFI------------------FSKTNSSSHRPLSWE 234
L G CS+ L+ E+ GSL F+ S + R L+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 235 KLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV 294
L A+ +++G++YL +++H D+ NIL+ + KISDFGL++ ++ S V
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 295 SLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMVGCRKNKDPA 344
+ R ++A E LF + + +SDV+S+G++L E+V N P
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIY---TTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 25/210 (11%)
Query: 141 LGQGGYGSVFRGKLFNGIP------VAVKMLEHLKGNGQ--EFINEVATIGRIHHFHIVR 192
LGQG +G V+ G + I VAVK + + EF+NE + + H+VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 193 LLGFCSEGTRRALVYEFMPNGSLEKFIFS----KTNSSSHRPLSWEKLKKIAFGVARGVE 248
LLG S+G +V E M +G L+ ++ S N+ P + +++ ++A +A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARG----TAG 304
YL+ ++ +H D+ N ++ H+F KI DFG+ ++DI + G
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGM----TRDIYETAYYRKGGKGLLPVR 197
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
++APE S G + SD++S+G++L E+
Sbjct: 198 WMAPE--SLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 141 LGQGGYGSVFRGKLF---NGIPVAVKMLEH--LKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG G +GSV +G I VA+K+L+ K + +E + E + ++ + +IVRL+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
C + LV E G L KF+ K P+S + ++ V+ G++YL +
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFLVGKREEI---PVS--NVAELLHQVSMGMKYLEE--- 454
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDISIVSLTAARGTAGYIAPELFSRN 314
+ +H ++ N+LL + KISDFGL+K L + D + +A + + APE N
Sbjct: 455 KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI--N 512
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
F + S +SDV+SYG+ + E +
Sbjct: 513 FRKFSSRSDVWSYGVTMWEAL 533
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 33/245 (13%)
Query: 116 DYRTVNPTRYTYK---ELKKITSKFKHRLGQGGYGSVFRGKLFN------GIPVAVKMLE 166
+Y ++PT+ Y E + F LG G +G V + + VAVKML+
Sbjct: 3 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 62
Query: 167 ---HLKGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGTRRALVYEFMPNGSL------- 215
HL + ++E+ + + +H +IV LLG C+ G ++ E+ G L
Sbjct: 63 PSAHLTER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK 121
Query: 216 -EKFIFSKTNSS----SHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILL 270
+ FI SKT+ + L E L ++ VA+G+ +L ++ +H D+ NILL
Sbjct: 122 RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILL 178
Query: 271 DHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGM 329
H KI DFGLA+ D + V AR ++APE +F+ + +++SDV+SYG+
Sbjct: 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY---TFESDVWSYGI 235
Query: 330 MLLEM 334
L E+
Sbjct: 236 FLWEL 240
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
F LG G +G V GK VA+KM++ + EFI E + + H +V+L G
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
C++ ++ E+M NG L ++ HR ++L ++ V +EYL ++
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYL----REMRHR-FQTQQLLEMCKDVCEAMEYLE---SK 124
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
+ LH D+ N L++ K+SDFGL++ D S ++ + PE+ +
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVLM--YS 181
Query: 317 EVSYKSDVYSYGMMLLEM 334
+ S KSD++++G+++ E+
Sbjct: 182 KFSSKSDIWAFGVLMWEI 199
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 33/231 (14%)
Query: 141 LGQGGYGSVFRGKLFN------GIPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHIVR 192
LG+G +G V + F+ VAVKML+ + + ++E + +++H H+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 193 LLGFCSEGTRRALVYEFMPNGSLEKFI------------------FSKTNSSSHRPLSWE 234
L G CS+ L+ E+ GSL F+ S + R L+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 235 KLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV 294
L A+ +++G++YL +++H D+ NIL+ + KISDFGL++ ++ S V
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 295 SLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMVGCRKNKDPA 344
+ R ++A E LF + + +SDV+S+G++L E+V N P
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIY---TTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
F LG G +G V GK VA+KM++ + EFI E + + H +V+L G
Sbjct: 19 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
C++ ++ E+M NG L ++ HR ++L ++ V +EYL ++
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYL----REMRHR-FQTQQLLEMCKDVCEAMEYLE---SK 130
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
+ LH D+ N L++ K+SDFGL++ D S ++ + PE+ +
Sbjct: 131 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVLM--YS 187
Query: 317 EVSYKSDVYSYGMMLLEM 334
+ S KSD++++G+++ E+
Sbjct: 188 KFSSKSDIWAFGVLMWEI 205
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
F LG G +G V GK VA+KM++ + EFI E + + H +V+L G
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
C++ ++ E+M NG L ++ HR ++L ++ V +EYL ++
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYL----REMRHR-FQTQQLLEMCKDVCEAMEYLE---SK 139
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
+ LH D+ N L++ K+SDFGL++ D S ++ + PE+ +
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVLM--YS 196
Query: 317 EVSYKSDVYSYGMMLLEM 334
+ S KSD++++G+++ E+
Sbjct: 197 KFSSKSDIWAFGVLMWEI 214
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 25/211 (11%)
Query: 141 LGQGGYGSVFRGKLFNGIP------VAVKMLEHLKGNGQ--EFINEVATIGRIHHFHIVR 192
LGQG +G V+ G + I VAVK + + EF+NE + + H+VR
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 193 LLGFCSEGTRRALVYEFMPNGSLEKFIFS----KTNSSSHRPLSWEKLKKIAFGVARGVE 248
LLG S+G +V E M +G L+ ++ S N+ P + +++ ++A +A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARG----TAG 304
YL+ ++ +H D+ N ++ H+F KI DFG+ ++DI G
Sbjct: 144 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGM----TRDIYETDYYRKGGKGLLPVR 196
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++APE S G + SD++S+G++L E+
Sbjct: 197 WMAPE--SLKDGVFTTSSDMWSFGVVLWEIT 225
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
F LG G +G V GK VA+KM++ + EFI E + + H +V+L G
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
C++ ++ E+M NG L ++ HR ++L ++ V +EYL ++
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYL----REMRHR-FQTQQLLEMCKDVCEAMEYLE---SK 139
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
+ LH D+ N L++ K+SDFGL++ D S+ ++ + PE+ +
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSV-GSKFPVRWSPPEVLM--YS 196
Query: 317 EVSYKSDVYSYGMMLLEM 334
+ S KSD++++G+++ E+
Sbjct: 197 KFSSKSDIWAFGVLMWEI 214
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 110/216 (50%), Gaps = 28/216 (12%)
Query: 141 LGQGGYGSVF--------RGKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFH 189
LG+G +G V + K + VAVKML + + + + ++E+ + I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK----------TNSSSHRPLSWEKLKKI 239
I+ LLG C++ ++ + G+L +++ ++ N ++++ L
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
+ +ARG+EYL +Q+ +H D+ N+L+ N KI+DFGLA+ + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 300 RGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
R ++APE LF R + +++SDV+S+G+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 110/224 (49%), Gaps = 24/224 (10%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNG-----IPVAVKMLEH---LKGNGQ 173
P + + LK+ + LG G +G+V++G IPVA+K+L K N +
Sbjct: 6 PNQALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKAN-K 64
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIF-SKTNSSSHRPLS 232
E ++E + + ++ RLLG C T + LV + MP G L + ++ S L+
Sbjct: 65 EILDEAYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLN 123
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
W +A+G+ YL + R++H D+ N+L+ KI+DFGLA+L D +
Sbjct: 124 W------CMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 174
Query: 293 IVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++A E + R F +++SDV+SYG+ + E++
Sbjct: 175 EYHADGGKVPIKWMALESILRRRF---THQSDVWSYGVTVWELM 215
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 141 LGQGGYGSVFRGKLFNGIP------VAVKMLEHLKGNGQ--EFINEVATIGRIHHFHIVR 192
LGQG +G V+ G + I VAVK + + EF+NE + + H+VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 193 LLGFCSEGTRRALVYEFMPNGSLEKFIFS----KTNSSSHRPLSWEKLKKIAFGVARGVE 248
LLG S+G +V E M +G L+ ++ S N+ P + +++ ++A +A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARG----TAG 304
YL+ ++ +H D+ N ++ H+F KI DFG+ ++DI G
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGM----TRDIYETDYYRKGGKGLLPVR 197
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
++APE S G + SD++S+G++L E+
Sbjct: 198 WMAPE--SLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 136 KFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
K +G+G +G V G + G VAVK +++ Q F+ E + + ++ H ++V+LLG
Sbjct: 196 KLLQTIGKGEFGDVMLGD-YRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLG 253
Query: 196 -FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
E +V E+M GSL ++ S+ S L + L K + V +EYL +G
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYL-EGN 308
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
N +H D+ N+L+ + K+SDFGL K S + + + APE
Sbjct: 309 N--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREK 361
Query: 315 FGEVSYKSDVYSYGMMLLEM 334
+ S KSDV+S+G++L E+
Sbjct: 362 --KFSTKSDVWSFGILLWEI 379
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 119 TVNPTRYTYKELKKI-TSKFKHR-LGQGGYGSVFRGKLFNG-IPVAVKMLE--------- 166
+NP Y K+ KI S FK R LG G YG V K NG A+K+++
Sbjct: 20 AINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRY 79
Query: 167 -----HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS 221
+++ +E NE++ + + H +I++L + LV EF G L + I +
Sbjct: 80 SDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN 139
Query: 222 KTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHN---FQPKI 278
+ + I + G+ YLH+ I+H DIKP NILL++ KI
Sbjct: 140 RHKFDECDAAN------IMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKI 190
Query: 279 SDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMML 331
DFGL+ SKD L GTA YIAPE+ + + E K DV+S G+++
Sbjct: 191 VDFGLSSFFSKD---YKLRDRLGTAYYIAPEVLKKKYNE---KCDVWSCGVIM 237
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 33/231 (14%)
Query: 141 LGQGGYGSVFRGKLFN------GIPVAVKMLEHLKGNGQ--EFINEVATIGRIHHFHIVR 192
LG+G +G V + F+ VAVKML+ + + ++E + +++H H+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 193 LLGFCSEGTRRALVYEFMPNGSLEKFI------------------FSKTNSSSHRPLSWE 234
L G CS+ L+ E+ GSL F+ S + R L+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 235 KLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV 294
L A+ +++G++YL ++H D+ NIL+ + KISDFGL++ ++ S V
Sbjct: 151 DLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 295 SLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMVGCRKNKDPA 344
+ R ++A E LF + + +SDV+S+G++L E+V N P
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIY---TTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 110/215 (51%), Gaps = 17/215 (7%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKMLE--HLKGNGQEFINEVAT 181
KE+ K + +G G +G V G+L I VA+K L+ + ++F++E +
Sbjct: 9 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 68
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAF 241
+G+ H +I+ L G ++ ++ E+M NGSL+ F+ + N + +L +
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTVI---QLVGMLR 123
Query: 242 GVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT-AAR 300
G+ G++YL + +H D+ NIL++ N K+SDFG++++ D T +
Sbjct: 124 GIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 180
Query: 301 GTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ APE + + + + SDV+SYG+++ E++
Sbjct: 181 IPIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVM 213
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 110/215 (51%), Gaps = 17/215 (7%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKMLE--HLKGNGQEFINEVAT 181
KE+ K + +G G +G V G+L I VA+K L+ + ++F++E +
Sbjct: 3 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 62
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAF 241
+G+ H +I+ L G ++ ++ E+M NGSL+ F+ + N + +L +
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTVI---QLVGMLR 117
Query: 242 GVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT-AAR 300
G+ G++YL + +H D+ NIL++ N K+SDFG++++ D T +
Sbjct: 118 GIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 174
Query: 301 GTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ APE + + + + SDV+SYG+++ E++
Sbjct: 175 IPIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVM 207
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 136 KFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
K +G+G +G V G + G VAVK +++ Q F+ E + + ++ H ++V+LLG
Sbjct: 24 KLLQTIGKGEFGDVMLGD-YRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLG 81
Query: 196 -FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
E +V E+M GSL ++ S+ S L + L K + V +EYL +G
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYL-EGN 136
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
N +H D+ N+L+ + K+SDFGL K S + + + APE
Sbjct: 137 N--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREK 189
Query: 315 FGEVSYKSDVYSYGMMLLEM 334
+ S KSDV+S+G++L E+
Sbjct: 190 --KFSTKSDVWSFGILLWEI 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 136 KFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
K +G+G +G V G + G VAVK +++ Q F+ E + + ++ H ++V+LLG
Sbjct: 9 KLLQTIGKGEFGDVMLGD-YRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 196 -FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
E +V E+M GSL ++ S+ S L + L K + V +EYL +G
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYL-EGN 121
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
N +H D+ N+L+ + K+SDFGL K S + + + APE
Sbjct: 122 N--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREK 174
Query: 315 FGEVSYKSDVYSYGMMLLEM 334
+ S KSDV+S+G++L E+
Sbjct: 175 --KFSTKSDVWSFGILLWEI 192
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 117/241 (48%), Gaps = 33/241 (13%)
Query: 120 VNPTRYTYK---ELKKITSKFKHRLGQGGYGSVFRGKLFN------GIPVAVKMLE---H 167
++PT+ Y E + F LG G +G V + + VAVKML+ H
Sbjct: 23 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 82
Query: 168 LKGNGQEFINEVATIGRI-HHFHIVRLLGFCSEGTRRALVYEFMPNGSL--------EKF 218
L + ++E+ + + +H +IV LLG C+ G ++ E+ G L + F
Sbjct: 83 LTER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 141
Query: 219 IFSKTNSS----SHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF 274
I SKT+ + L E L ++ VA+G+ +L ++ +H D+ NILL H
Sbjct: 142 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGR 198
Query: 275 QPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLE 333
KI DFGLA+ D + V AR ++APE +F+ + +++SDV+SYG+ L E
Sbjct: 199 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY---TFESDVWSYGIFLWE 255
Query: 334 M 334
+
Sbjct: 256 L 256
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 27/248 (10%)
Query: 117 YRTVNPTRYTYKE---LKKITSKFKHRLGQGGYGSVFRGKLFN------GIPVAVKMLEH 167
Y ++PT+ Y E + +F LG G +G V F + VAVKML+
Sbjct: 27 YTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS 86
Query: 168 LK--GNGQEFINEVATIGRI-HHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTN 224
+ ++E+ + + H +IV LLG C+ G ++ E+ G L F+ K+
Sbjct: 87 TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSR 146
Query: 225 SSSHRPL--------SWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQP 276
P S L + VA+G+ +L ++ +H D+ N+LL +
Sbjct: 147 VLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVA 203
Query: 277 KISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
KI DFGLA+ D + + AR ++APE +F + + +SDV+SYG++L E+
Sbjct: 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY---TVQSDVWSYGILLWEIF 260
Query: 336 GCRKNKDP 343
N P
Sbjct: 261 SLGLNPYP 268
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 19/201 (9%)
Query: 140 RLGQGGYGSVFRGKLFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
++G+G YG V++ K G VA+K + +G I E++ + +HH +IV L+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
LV+EFM K + L ++K + + RGV + HQ
Sbjct: 88 IHSERCLTLVFEFMEKD------LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---H 138
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
RILH D+KP N+L++ + K++DFGLA+ I + S T T Y AP++ G
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFG--IPVRSYTHEVVTLWYRAPDVL---MG 193
Query: 317 EVSYKS--DVYSYGMMLLEMV 335
Y + D++S G + EM+
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMI 214
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 136 KFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
K +G+G +G V G + G VAVK +++ Q F+ E + + ++ H ++V+LLG
Sbjct: 15 KLLQTIGKGEFGDVMLGD-YRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLG 72
Query: 196 -FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
E +V E+M GSL ++ S+ S L + L K + V +EYL +G
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYL-EGN 127
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
N +H D+ N+L+ + K+SDFGL K S + + + APE
Sbjct: 128 N--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALRE- 179
Query: 315 FGEVSYKSDVYSYGMMLLEM 334
S KSDV+S+G++L E+
Sbjct: 180 -AAFSTKSDVWSFGILLWEI 198
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQ--EFINEVAT 181
+KIT LGQG +G V+ G + G+ VA+K + + EF+NE +
Sbjct: 10 EKIT--MSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 66
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS----KTNSSSHRPLSWEKLK 237
+ + H+VRLLG S+G ++ E M G L+ ++ S N+ P S K+
Sbjct: 67 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT 297
++A +A G+ YL+ + +H D+ N ++ +F KI DFG+ ++DI
Sbjct: 127 QMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGM----TRDIXETDXX 179
Query: 298 AARG----TAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
G +++PE S G + SDV+S+G++L E+
Sbjct: 180 RKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 116/245 (47%), Gaps = 39/245 (15%)
Query: 117 YRTVNPTRYTYKEL----------KKITSKFKHRLGQGGYGSVFRGKLFNGIP------- 159
Y +VNP ++ ++ +KIT LGQG +G V+ G + G+
Sbjct: 23 YASVNPEYFSAADVYVPDEWEVAREKIT--MSRELGQGSFGMVYEG-VAKGVVKDEPETR 79
Query: 160 VAVKMLEHLKGNGQ--EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEK 217
VA+K + + EF+NE + + + H+VRLLG S+G ++ E M G L+
Sbjct: 80 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 139
Query: 218 FIFS----KTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHN 273
++ S N+ P S K+ ++A +A G+ YL+ + +H D+ N ++ +
Sbjct: 140 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAED 196
Query: 274 FQPKISDFGLAKLCSKDISIVSLTAARG----TAGYIAPELFSRNFGEVSYKSDVYSYGM 329
F KI DFG+ ++DI G +++PE S G + SDV+S+G+
Sbjct: 197 FTVKIGDFGM----TRDIYETDYYRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGV 250
Query: 330 MLLEM 334
+L E+
Sbjct: 251 VLWEI 255
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 19/201 (9%)
Query: 140 RLGQGGYGSVFRGKLFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
++G+G YG V++ K G VA+K + +G I E++ + +HH +IV L+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
LV+EFM K + L ++K + + RGV + HQ
Sbjct: 88 IHSERCLTLVFEFMEKD------LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---H 138
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
RILH D+KP N+L++ + K++DFGLA+ I + S T T Y AP++ G
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFG--IPVRSYTHEVVTLWYRAPDVL---MG 193
Query: 317 EVSYKS--DVYSYGMMLLEMV 335
Y + D++S G + EM+
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMI 214
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQ--EFINEVAT 181
+KIT LGQG +G V+ G + G+ VA+K + + EF+NE +
Sbjct: 19 EKIT--MSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS----KTNSSSHRPLSWEKLK 237
+ + H+VRLLG S+G ++ E M G L+ ++ S N+ P S K+
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT 297
++A +A G+ YL+ + +H D+ N ++ +F KI DFG+ ++DI
Sbjct: 136 QMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGM----TRDIXETDXX 188
Query: 298 AARG----TAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
G +++PE S G + SDV+S+G++L E+
Sbjct: 189 RKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 141 LGQGGYGSVFRGKLFNGIP------VAVKMLEHLKGNGQ--EFINEVATIGRIHHFHIVR 192
LGQG +G V+ G + I VAVK + + EF+NE + + H+VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 193 LLGFCSEGTRRALVYEFMPNGSLEKFIFS----KTNSSSHRPLSWEKLKKIAFGVARGVE 248
LLG S+G +V E M +G L+ ++ S N+ P + +++ ++A +A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARG----TAG 304
YL+ ++ +H ++ N ++ H+F KI DFG+ ++DI G
Sbjct: 145 YLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGM----TRDIYETDYYRKGGKGLLPVR 197
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
++APE S G + SD++S+G++L E+
Sbjct: 198 WMAPE--SLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 139 HRLGQGGYGSVFRGKL-FNGIPVAVK-----MLEHLKGNGQEFINEVATIGRIHHFHIVR 192
++G+G +G VF G+L + VAVK + LK +F+ E + + H +IVR
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA---KFLQEARILKQYSHPNIVR 176
Query: 193 LLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
L+G C++ +V E + G F+ +T + R + L ++ A G+EYL
Sbjct: 177 LIGVCTQKQPIYIVMELVQGGDFLTFL--RTEGARLRV---KTLLQMVGDAAAGMEYLES 231
Query: 253 GCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS 312
C +H D+ N L+ KISDFG+++ + + S + + APE
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEAL- 287
Query: 313 RNFGEVSYKSDVYSYGMMLLE 333
N+G S +SDV+S+G++L E
Sbjct: 288 -NYGRYSSESDVWSFGILLWE 307
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 141 LGQGGYGSVFRGKLFNGIP------VAVKMLEHLKGNGQ--EFINEVATIGRIHHFHIVR 192
LGQG +G V+ G + I VAVK + + EF+NE + + H+VR
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 193 LLGFCSEGTRRALVYEFMPNGSLEKFIFS----KTNSSSHRPLSWEKLKKIAFGVARGVE 248
LLG S+G +V E M +G L+ ++ S N+ P + +++ ++A +A G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARG----TAG 304
YL+ ++ +H ++ N ++ H+F KI DFG+ ++DI G
Sbjct: 146 YLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGM----TRDIYETDYYRKGGKGLLPVR 198
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
++APE S G + SD++S+G++L E+
Sbjct: 199 WMAPE--SLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 141 LGQGGYGSVFRGKLFNGIPVAVKMLEH-----LKGNGQEFINEVATIGRIHHFHIVRLLG 195
+G GG+G V+R + G VAVK H + + E + H +I+ L G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
C + LV EF G L + + S + + + L A +ARG+ YLH
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVL-------SGKRIPPDILVNWAVQIARGMNYLHDEAI 126
Query: 256 QRILHFDIKPHNILLDHNFQP--------KISDFGLAKLCSKDISIVSLTAARGTAGYIA 307
I+H D+K NIL+ + KI+DFGLA+ + + +A G ++A
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM----SAAGAYAWMA 182
Query: 308 PELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PE+ + S SDV+SYG++L E++
Sbjct: 183 PEVIRASM--FSKGSDVWSYGVLLWELL 208
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 39/243 (16%)
Query: 119 TVNPTRYTYKEL----------KKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VA 161
+VNP ++ ++ +KIT LGQG +G V+ G + G+ VA
Sbjct: 3 SVNPEYFSAADVYVPDEWEVAREKIT--MSRELGQGSFGMVYEG-VAKGVVKDEPETRVA 59
Query: 162 VKMLEHLKGNGQ--EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFI 219
+K + + EF+NE + + + H+VRLLG S+G ++ E M G L+ ++
Sbjct: 60 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
Query: 220 FSKTNSSSHRPL----SWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQ 275
S + ++ P+ S K+ ++A +A G+ YL+ + +H D+ N ++ +F
Sbjct: 120 RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFT 176
Query: 276 PKISDFGLAKLCSKDISIVSLTAARG----TAGYIAPELFSRNFGEVSYKSDVYSYGMML 331
KI DFG+ ++DI G +++PE S G + SDV+S+G++L
Sbjct: 177 VKIGDFGM----TRDIYETDYYRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVL 230
Query: 332 LEM 334
E+
Sbjct: 231 WEI 233
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQ--EFINEVAT 181
+KIT LGQG +G V+ G + G+ VA+K + + EF+NE +
Sbjct: 15 EKIT--MSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 71
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPL----SWEKLK 237
+ + H+VRLLG S+G ++ E M G L+ ++ S + ++ P+ S K+
Sbjct: 72 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT 297
++A +A G+ YL+ + +H D+ N ++ +F KI DFG+ ++DI
Sbjct: 132 QMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGM----TRDIYETDYY 184
Query: 298 AARG----TAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
G +++PE S G + SDV+S+G++L E+
Sbjct: 185 RKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 18/199 (9%)
Query: 140 RLGQGGYGSVFRGKL-FNGIPVAVKMLEHLKGNGQEFI-NEVATIGRIHHFHIVRLLGFC 197
++G+G G V + +G VAVK ++ K +E + NEV + H ++V +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
G +V EF+ G+L T+ +H ++ E++ + V + + LH Q
Sbjct: 87 LVGDELWVVMEFLEGGAL-------TDIVTHTRMNEEQIAAVCLAVLQALSVLHA---QG 136
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR-NFG 316
++H DIK +ILL H+ + K+SDFG SK++ GT ++APEL SR +G
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKXLVGTPYWMAPELISRLPYG 194
Query: 317 EVSYKSDVYSYGMMLLEMV 335
+ D++S G+M++EMV
Sbjct: 195 P---EVDIWSLGIMVIEMV 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 18/199 (9%)
Query: 140 RLGQGGYGSVFRGKL-FNGIPVAVKMLEHLKGNGQEFI-NEVATIGRIHHFHIVRLLGFC 197
++G+G G V + +G VAVK ++ K +E + NEV + H ++V +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
G +V EF+ G+L T+ +H ++ E++ + V + + LH Q
Sbjct: 96 LVGDELWVVMEFLEGGAL-------TDIVTHTRMNEEQIAAVCLAVLQALSVLHA---QG 145
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR-NFG 316
++H DIK +ILL H+ + K+SDFG SK++ GT ++APEL SR +G
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKXLVGTPYWMAPELISRLPYG 203
Query: 317 EVSYKSDVYSYGMMLLEMV 335
+ D++S G+M++EMV
Sbjct: 204 P---EVDIWSLGIMVIEMV 219
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 18/199 (9%)
Query: 140 RLGQGGYGSVFRGKL-FNGIPVAVKMLEHLKGNGQEFI-NEVATIGRIHHFHIVRLLGFC 197
++G+G G V + +G VAVK ++ K +E + NEV + H ++V +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
G +V EF+ G+L T+ +H ++ E++ + V + + LH Q
Sbjct: 91 LVGDELWVVMEFLEGGAL-------TDIVTHTRMNEEQIAAVCLAVLQALSVLHA---QG 140
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR-NFG 316
++H DIK +ILL H+ + K+SDFG SK++ GT ++APEL SR +G
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKXLVGTPYWMAPELISRLPYG 198
Query: 317 EVSYKSDVYSYGMMLLEMV 335
+ D++S G+M++EMV
Sbjct: 199 P---EVDIWSLGIMVIEMV 214
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQ--EFINEVAT 181
+KIT LGQG +G V+ G + G+ VA+K + + EF+NE +
Sbjct: 18 EKIT--MSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS----KTNSSSHRPLSWEKLK 237
+ + H+VRLLG S+G ++ E M G L+ ++ S N+ P S K+
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT 297
++A +A G+ YL+ + +H D+ N ++ +F KI DFG+ ++DI
Sbjct: 135 QMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGM----TRDIYETDYY 187
Query: 298 AARG----TAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
G +++PE S G + SDV+S+G++L E+
Sbjct: 188 RKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 140 RLGQGGYGSVFRGKL-FNGIPVAVK-----MLEHLKGNGQEFINEVATIGRIHHFHIVRL 193
++G+G +G VF G+L + VAVK + LK +F+ E + + H +IVRL
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA---KFLQEARILKQYSHPNIVRL 177
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
+G C++ +V E + G F+ +T + R + L ++ A G+EYL
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFL--RTEGARLRV---KTLLQMVGDAAAGMEYLESK 232
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
C +H D+ N L+ KISDFG+++ + + S + + APE
Sbjct: 233 C---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEAL-- 287
Query: 314 NFGEVSYKSDVYSYGMMLLE 333
N+G S +SDV+S+G++L E
Sbjct: 288 NYGRYSSESDVWSFGILLWE 307
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 18/199 (9%)
Query: 140 RLGQGGYGSVFRGKL-FNGIPVAVKMLEHLKGNGQEFI-NEVATIGRIHHFHIVRLLGFC 197
++G+G G V + +G VAVK ++ K +E + NEV + H ++V +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
G +V EF+ G+L T+ +H ++ E++ + V + + LH Q
Sbjct: 98 LVGDELWVVMEFLEGGAL-------TDIVTHTRMNEEQIAAVCLAVLQALSVLHA---QG 147
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR-NFG 316
++H DIK +ILL H+ + K+SDFG SK++ GT ++APEL SR +G
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKXLVGTPYWMAPELISRLPYG 205
Query: 317 EVSYKSDVYSYGMMLLEMV 335
+ D++S G+M++EMV
Sbjct: 206 P---EVDIWSLGIMVIEMV 221
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 26/232 (11%)
Query: 114 LEDYRTVNPTRYTYKEL------KKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKM 164
LE + NP R K+L K+ F +LG+G YGSV++ G VA+K
Sbjct: 2 LETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQ 61
Query: 165 LEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTN 224
+ ++ + QE I E++ + + H+V+ G + T +V E+ GS+ I +
Sbjct: 62 VP-VESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK 120
Query: 225 SSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLA 284
+ L+ +++ I +G+EYLH R +H DIK NILL+ K++DFG+A
Sbjct: 121 T-----LTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVA 172
Query: 285 KLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYK--SDVYSYGMMLLEM 334
+ ++ GT ++APE+ E+ Y +D++S G+ +EM
Sbjct: 173 GQLTDXMA--KRNXVIGTPFWMAPEVIQ----EIGYNCVADIWSLGITAIEM 218
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 119 TVNPTRYTYKEL----------KKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VA 161
+VNP ++ ++ +KIT LGQG +G V+ G + G+ VA
Sbjct: 3 SVNPEYFSAADVYVPDEWEVAREKIT--MSRELGQGSFGMVYEG-VAKGVVKDEPETRVA 59
Query: 162 VKMLEHLKGNGQ--EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFI 219
+K + + EF+NE + + + H+VRLLG S+G ++ E M G L+ ++
Sbjct: 60 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
Query: 220 FS----KTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQ 275
S N+ P S K+ ++A +A G+ YL+ + +H D+ N ++ +F
Sbjct: 120 RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFT 176
Query: 276 PKISDFGLAKLCSKDISIVSLTAARG----TAGYIAPELFSRNFGEVSYKSDVYSYGMML 331
KI DFG+ ++DI G +++PE S G + SDV+S+G++L
Sbjct: 177 VKIGDFGM----TRDIYETDYYRKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVL 230
Query: 332 LEM 334
E+
Sbjct: 231 WEI 233
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQ--EFINEVAT 181
+KIT LGQG +G V+ G + G+ VA+K + + EF+NE +
Sbjct: 18 EKIT--MSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS----KTNSSSHRPLSWEKLK 237
+ + H+VRLLG S+G ++ E M G L+ ++ S N+ P S K+
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT 297
++A +A G+ YL+ + +H D+ N ++ +F KI DFG+ ++DI
Sbjct: 135 QMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGM----TRDIYETDYY 187
Query: 298 AARG----TAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
G +++PE S G + SDV+S+G++L E+
Sbjct: 188 RKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGI-------PVAVKMLEHLKGNGQ--EFINEVAT 181
+KIT LGQG +G V+ G + G+ VA+K + + EF+NE +
Sbjct: 12 EKIT--MSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS----KTNSSSHRPLSWEKLK 237
+ + H+VRLLG S+G ++ E M G L+ ++ S N+ P S K+
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT 297
++A +A G+ YL+ + +H D+ N ++ +F KI DFG+ ++DI
Sbjct: 129 QMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGM----TRDIYETDYY 181
Query: 298 AARG----TAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
G +++PE S G + SDV+S+G++L E+
Sbjct: 182 RKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQ--EFINEVAT 181
+KIT LGQG +G V+ G + G+ VA+K + + EF+NE +
Sbjct: 19 EKIT--MSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS----KTNSSSHRPLSWEKLK 237
+ + H+VRLLG S+G ++ E M G L+ ++ S N+ P S K+
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT 297
++A +A G+ YL+ + +H D+ N ++ +F KI DFG+ ++DI
Sbjct: 136 QMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGM----TRDIYETDYY 188
Query: 298 AARG----TAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
G +++PE S G + SDV+S+G++L E+
Sbjct: 189 RKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQ--EFINEVAT 181
+KIT LGQG +G V+ G + G+ VA+K + + EF+NE +
Sbjct: 16 EKIT--MSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 72
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS----KTNSSSHRPLSWEKLK 237
+ + H+VRLLG S+G ++ E M G L+ ++ S N+ P S K+
Sbjct: 73 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT 297
++A +A G+ YL+ + +H D+ N ++ +F KI DFG+ ++DI
Sbjct: 133 QMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGM----TRDIYETDYY 185
Query: 298 AARG----TAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
G +++PE S G + SDV+S+G++L E+
Sbjct: 186 RKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLFNGIP------VAVKMLEHLKGNG---QEFINE 178
KE+ +F LG+ +G V++G LF P VA+K L+ K G +EF +E
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD-KAEGPLREEFRHE 62
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKK 238
R+ H ++V LLG ++ ++++ + +G L +F+ ++ S ++ K
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 239 IAF----------GVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
A +A G+EYL + ++H D+ N+L+ KISD GL +
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVY 179
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
L + ++APE +G+ S SD++SYG++L E+
Sbjct: 180 AADYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEV 223
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLFNGIP------VAVKMLEHLKGNG---QEFINE 178
KE+ +F LG+ +G V++G LF P VA+K L+ K G +EF +E
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD-KAEGPLREEFRHE 79
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKK 238
R+ H ++V LLG ++ ++++ + +G L +F+ ++ S ++ K
Sbjct: 80 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 139
Query: 239 IAF----------GVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
A +A G+EYL + ++H D+ N+L+ KISD GL +
Sbjct: 140 SALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVY 196
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
L + ++APE +G+ S SD++SYG++L E+
Sbjct: 197 AADYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEV 240
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 18/199 (9%)
Query: 140 RLGQGGYGSVFRGKL-FNGIPVAVKMLEHLKGNGQEFI-NEVATIGRIHHFHIVRLLGFC 197
++G+G G V + +G VAVK ++ K +E + NEV + H ++V +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
G +V EF+ G+L T+ +H ++ E++ + V + + LH Q
Sbjct: 218 LVGDELWVVMEFLEGGAL-------TDIVTHTRMNEEQIAAVCLAVLQALSVLHA---QG 267
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR-NFG 316
++H DIK +ILL H+ + K+SDFG SK++ GT ++APEL SR +G
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPELISRLPYG 325
Query: 317 EVSYKSDVYSYGMMLLEMV 335
+ D++S G+M++EMV
Sbjct: 326 P---EVDIWSLGIMVIEMV 341
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 30/209 (14%)
Query: 141 LGQGGYGSVFRGKLFN--GIPVAVKMLEHLKGN-GQEF--INEVATIGRIHHF---HIVR 192
+G+G YG VF+ + G VA+K + G G I EVA + + F ++VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 193 LLGFCS-----EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
L C+ T+ LV+E +++ + + + + E +K + F + RG+
Sbjct: 79 LFDVCTVSRTDRETKLTLVFE-----HVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIA 307
++LH + R++H D+KP NIL+ + Q K++DFGLA++ S +++ S+ T Y A
Sbjct: 134 DFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV---TLWYRA 187
Query: 308 PELFSRNFGEVSYKS--DVYSYGMMLLEM 334
PE+ ++ SY + D++S G + EM
Sbjct: 188 PEVLLQS----SYATPVDLWSVGCIFAEM 212
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 30/209 (14%)
Query: 141 LGQGGYGSVFRGKLFN--GIPVAVKMLEHLKGN-GQEF--INEVATIGRIHHF---HIVR 192
+G+G YG VF+ + G VA+K + G G I EVA + + F ++VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 193 LLGFCS-----EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
L C+ T+ LV+E +++ + + + + E +K + F + RG+
Sbjct: 79 LFDVCTVSRTDRETKLTLVFE-----HVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIA 307
++LH + R++H D+KP NIL+ + Q K++DFGLA++ S +++ S+ T Y A
Sbjct: 134 DFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV---TLWYRA 187
Query: 308 PELFSRNFGEVSYKS--DVYSYGMMLLEM 334
PE+ ++ SY + D++S G + EM
Sbjct: 188 PEVLLQS----SYATPVDLWSVGCIFAEM 212
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 18/199 (9%)
Query: 140 RLGQGGYGSVFRGKL-FNGIPVAVKMLEHLKGNGQEFI-NEVATIGRIHHFHIVRLLGFC 197
++G+G G V + +G VAVK ++ K +E + NEV + H ++V +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
G +V EF+ G+L T+ +H ++ E++ + V + + LH Q
Sbjct: 141 LVGDELWVVMEFLEGGAL-------TDIVTHTRMNEEQIAAVCLAVLQALSVLHA---QG 190
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR-NFG 316
++H DIK +ILL H+ + K+SDFG SK++ GT ++APEL SR +G
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPELISRLPYG 248
Query: 317 EVSYKSDVYSYGMMLLEMV 335
+ D++S G+M++EMV
Sbjct: 249 P---EVDIWSLGIMVIEMV 264
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 22/208 (10%)
Query: 142 GQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGT 201
+G +G V++ +L N VAVK+ + EV ++ + H +I++ +G GT
Sbjct: 33 ARGRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT 91
Query: 202 RRA----LVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ----- 252
L+ F GSL F+ K N +SW +L IA +ARG+ YLH+
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFL--KANV-----VSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 253 --GCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPEL 310
G I H DIK N+LL +N I+DFGLA S GT Y+APE+
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV 204
Query: 311 F--SRNFGEVSY-KSDVYSYGMMLLEMV 335
+ NF ++ + D+Y+ G++L E+
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWELA 232
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 105/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 121
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + T T Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEIL---L 176
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 30/209 (14%)
Query: 141 LGQGGYGSVFRGKLFN--GIPVAVKMLEHLKGN-GQEF--INEVATIGRIHHF---HIVR 192
+G+G YG VF+ + G VA+K + G G I EVA + + F ++VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 193 LLGFCS-----EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
L C+ T+ LV+E +++ + + + + E +K + F + RG+
Sbjct: 79 LFDVCTVSRTDRETKLTLVFE-----HVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIA 307
++LH + R++H D+KP NIL+ + Q K++DFGLA++ S +++ S+ T Y A
Sbjct: 134 DFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV---TLWYRA 187
Query: 308 PELFSRNFGEVSYKS--DVYSYGMMLLEM 334
PE+ ++ SY + D++S G + EM
Sbjct: 188 PEVLLQS----SYATPVDLWSVGCIFAEM 212
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 105/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 77 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 128
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + T T Y APE+
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEIL---L 183
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 39/223 (17%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSE 199
LGQG +G V + + + A+K + H + ++EV + ++H ++VR E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 200 GTRRALV---------------YEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
RR V E+ N +L I S+ N + R W ++I
Sbjct: 74 --RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE-NLNQQRDEYWRLFRQIL---- 126
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV---------- 294
+ Y+H +Q I+H ++KP NI +D + KI DFGLAK + + I+
Sbjct: 127 EALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 295 --SLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+LT+A GTA Y+A E+ G + K D YS G++ E +
Sbjct: 184 SDNLTSAIGTAXYVATEVLD-GTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 29/221 (13%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQ--EFINEVAT 181
+KIT LGQG +G V+ G + G+ VA+K + + EF+NE +
Sbjct: 12 EKIT--MSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 182 IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFS----KTNSSSHRPLSWEKLK 237
+ + H+VRLLG S+G ++ E M G L+ ++ S N+ P S K+
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT 297
++A +A G+ YL+ + +H D+ N + +F KI DFG+ ++DI
Sbjct: 129 QMAGEIADGMAYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGM----TRDIYETDYY 181
Query: 298 AARG----TAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
G +++PE S G + SDV+S+G++L E+
Sbjct: 182 RKGGKGLLPVRWMSPE--SLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 110/213 (51%), Gaps = 34/213 (15%)
Query: 141 LGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEG 200
+G GG+G VF+ K + I +++ +K N ++ EV + ++ H +IV G C +G
Sbjct: 19 IGSGGFGQVFKAK--HRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNG-CWDG 75
Query: 201 -----------TRRA------LVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGV 243
+ R+ + EF G+LE++I + + L+ E ++I
Sbjct: 76 FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT--- 132
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTA 303
+GV+Y+H ++++++ D+KP NI L Q KI DFGL D ++GT
Sbjct: 133 -KGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRXRSKGTL 185
Query: 304 GYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
Y++PE + S+++G+ + D+Y+ G++L E++
Sbjct: 186 RYMSPEQISSQDYGK---EVDLYALGLILAELL 215
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 119/262 (45%), Gaps = 39/262 (14%)
Query: 99 ESEKEKETQLKVEKFLEDYRTVNPT------RYTYKELKKITSK---FKHRLGQGGYGSV 149
+S + K ++L+ + DY NP + +LK++ K LG G +G V
Sbjct: 7 QSPEYKLSKLRTSTIMTDY---NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEV 63
Query: 150 FRGKLFNGIP-------VAVKMLEHLKGNGQE--FINEVATIGRIHHFHIVRLLGFCSEG 200
+ G++ +G+P VAVK L + E F+ E I + +H +IVR +G +
Sbjct: 64 YEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 122
Query: 201 TRRALVYEFMPNGSLEKFIF-SKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRIL 259
R ++ E M G L+ F+ ++ S L+ L +A +A G +YL + +
Sbjct: 123 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFI 179
Query: 260 HFDIKPHNILLD---HNFQPKISDFGLAKLCSKDISIVSLTAARGTA----GYIAPELFS 312
H DI N LL KI DFG+A +DI S G A ++ PE F
Sbjct: 180 HRDIAARNCLLTCPGPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLPVKWMPPEAFM 235
Query: 313 RNFGEVSYKSDVYSYGMMLLEM 334
G + K+D +S+G++L E+
Sbjct: 236 E--GIFTSKTDTWSFGVLLWEI 255
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLSFCH---S 121
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T T Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEIL---L 176
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 47/244 (19%)
Query: 123 TRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATI 182
T+YT + + K +G GG+G VF+ K + I ++ +K N ++ EV +
Sbjct: 2 TKYTVDKRFGMDFKEIELIGSGGFGQVFKAK--HRIDGKTYVIRRVKYNNEKAEREVKAL 59
Query: 183 GRIHHFHIVRLLGFCSEG------------------------TRRA------LVYEFMPN 212
++ H +IV G C +G + R+ + EF
Sbjct: 60 AKLDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK 118
Query: 213 GSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDH 272
G+LE++I + + L+ E ++I +GV+Y+H +++++H D+KP NI L
Sbjct: 119 GTLEQWIEKRRGEKLDKVLALELFEQIT----KGVDYIH---SKKLIHRDLKPSNIFLVD 171
Query: 273 NFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMML 331
Q KI DFGL D T ++GT Y++PE + S+++G+ + D+Y+ G++L
Sbjct: 172 TKQVKIGDFGLVTSLKND---GKRTRSKGTLRYMSPEQISSQDYGK---EVDLYALGLIL 225
Query: 332 LEMV 335
E++
Sbjct: 226 AELL 229
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 121
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T T Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEIL---L 176
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 120
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T T Y APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEIL---L 175
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 71 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 122
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T T Y APE+
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEIL---L 177
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 105/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 74 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 125
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + T T Y APE+
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEIL---L 180
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 120
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T T Y APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEIL---L 175
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 121/263 (46%), Gaps = 41/263 (15%)
Query: 99 ESEKEKETQLKVEKFLEDYRTVNPTRYTY-------KELKKITSK---FKHRLGQGGYGS 148
+S + K ++L+ + DY NP Y++ +LK++ K LG G +G
Sbjct: 17 QSPEYKLSKLRTSTIMTDY---NPN-YSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGE 72
Query: 149 VFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINEVATIGRIHHFHIVRLLGFCSE 199
V+ G++ +G+P VAVK L + E F+ E I + +H +IVR +G +
Sbjct: 73 VYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 131
Query: 200 GTRRALVYEFMPNGSLEKFIF-SKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRI 258
R ++ E M G L+ F+ ++ S L+ L +A +A G +YL +
Sbjct: 132 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HF 188
Query: 259 LHFDIKPHNILLD---HNFQPKISDFGLAKLCSKDISIVSLTAARGTA----GYIAPELF 311
+H DI N LL KI DFG+A +DI S G A ++ PE F
Sbjct: 189 IHRDIAARNCLLTCPGPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLPVKWMPPEAF 244
Query: 312 SRNFGEVSYKSDVYSYGMMLLEM 334
G + K+D +S+G++L E+
Sbjct: 245 ME--GIFTSKTDTWSFGVLLWEI 265
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 121
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T T Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEIL---L 176
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 77 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 128
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T T Y APE+
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEIL---L 183
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 27/224 (12%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINE 178
KE+ + LG G +G V+ G++ +G+P VAVK L + E F+ E
Sbjct: 40 KEVPRKNITLIRGLGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLME 98
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIF-SKTNSSSHRPLSWEKLK 237
I +++H +IVR +G + R ++ E M G L+ F+ ++ S L+ L
Sbjct: 99 ALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 158
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD---HNFQPKISDFGLAKLCSKDISIV 294
+A +A G +YL + +H DI N LL KI DFG+A +DI
Sbjct: 159 HVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA----RDIYRA 211
Query: 295 SLTAARGTA----GYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
S G A ++ PE F G + K+D +S+G++L E+
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEI 253
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 19/208 (9%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLE----HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G + V+R + + G+ VA+KM++ + G Q NEV ++ H I+ L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + LV E NG + +++ ++ +P S + + + G+ YLH +
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYLKNRV-----KPFSENEARHFMHQIITGMLYLH---S 130
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLA-KLCSKDISIVSLTAARGTAGYIAPELFSRN 314
ILH D+ N+LL N KI+DFGLA +L +L GT YI+PE+ +R+
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC---GTPNYISPEIATRS 187
Query: 315 FGEVSYKSDVYSYGMMLLEMVGCRKNKD 342
+ +SDV+S G M ++ R D
Sbjct: 188 AHGL--ESDVWSLGCMFYTLLIGRPPFD 213
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 27/224 (12%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINE 178
KE+ + LG G +G V+ G++ +G+P VAVK L + E F+ E
Sbjct: 26 KEVPRKNITLIRGLGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLME 84
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIF-SKTNSSSHRPLSWEKLK 237
I +++H +IVR +G + R ++ E M G L+ F+ ++ S L+ L
Sbjct: 85 ALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 144
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD---HNFQPKISDFGLAKLCSKDISIV 294
+A +A G +YL + +H DI N LL KI DFG+A +DI
Sbjct: 145 HVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA----RDIYRA 197
Query: 295 SLTAARGTA----GYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
S G A ++ PE F G + K+D +S+G++L E+
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEI 239
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 136 KFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINE--VATIGRIHHFHIVRL 193
K +G+G YG+V++G L + PVAVK+ N Q FINE + + + H +I R
Sbjct: 16 KLLELIGRGRYGAVYKGSL-DERPVAVKVFSF--ANRQNFINEKNIYRVPLMEHDNIARF 72
Query: 194 L----GFCSEGTRR-ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+ ++G LV E+ PNGSL K++ T+ W ++A V RG+
Sbjct: 73 IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-------DWVSSCRLAHSVTRGLA 125
Query: 249 YLHQGCNQ------RILHFDIKPHNILLDHNFQPKISDFGLA------KLCSKDISIVSL 296
YLH + I H D+ N+L+ ++ ISDFGL+ +L +
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAA 185
Query: 297 TAARGTAGYIAPELFS-----RNFGEVSYKSDVYSYGMMLLEM 334
+ GT Y+APE+ R+ + D+Y+ G++ E+
Sbjct: 186 ISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 106/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVA---VKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA +++ +G I E++ + ++H +IV+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 121
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T T Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEIL---L 176
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 106/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVA---VKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA +++ +G I E++ + ++H +IV+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 120
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T T Y APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEIL---L 175
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 41/258 (15%)
Query: 104 KETQLKVEKFLEDYRTVNPTRYTY-------KELKKITSK---FKHRLGQGGYGSVFRGK 153
K ++L+ + DY NP Y++ +LK++ K LG G +G V+ G+
Sbjct: 2 KLSKLRTSTIMTDY---NPN-YSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQ 57
Query: 154 LFNGIP-------VAVKMLEHLKGNGQE--FINEVATIGRIHHFHIVRLLGFCSEGTRRA 204
+ +G+P VAVK L + E F+ E I + +H +IVR +G + R
Sbjct: 58 V-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 116
Query: 205 LVYEFMPNGSLEKFIF-SKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDI 263
++ E M G L+ F+ ++ S L+ L +A +A G +YL + +H DI
Sbjct: 117 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDI 173
Query: 264 KPHNILLD---HNFQPKISDFGLAKLCSKDISIVSLTAARGTA----GYIAPELFSRNFG 316
N LL KI DFG+A +DI S G A ++ PE F G
Sbjct: 174 AARNCLLTCPGPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLPVKWMPPEAFME--G 227
Query: 317 EVSYKSDVYSYGMMLLEM 334
+ K+D +S+G++L E+
Sbjct: 228 IFTSKTDTWSFGVLLWEI 245
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 140 RLGQGGYGSVFRGK--LFNGIPVAVK--MLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
+LG+G Y +V++GK L + + VA+K LEH +G I EV+ + + H +IV L
Sbjct: 9 KLGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
LV+E++ + L++++ N ++ +K F + RG+ Y H+
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYLDDCGNI-----INMHNVKLFLFQLLRGLAYCHR--- 118
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
Q++LH D+KP N+L++ + K++DFGLA+ +K I + T Y P++
Sbjct: 119 QKVLHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRPPDIL---L 173
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++ G + EM R
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 27/224 (12%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINE 178
KE+ + LG G +G V+ G++ +G+P VAVK L + E F+ E
Sbjct: 25 KEVPRKNITLIRGLGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLME 83
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIF-SKTNSSSHRPLSWEKLK 237
I + +H +IVR +G + R ++ E M G L+ F+ ++ S L+ L
Sbjct: 84 ALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 143
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD---HNFQPKISDFGLAKLCSKDISIV 294
+A +A G +YL + +H DI N LL KI DFG+A +DI
Sbjct: 144 HVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA----RDIYRA 196
Query: 295 SLTAARGTA----GYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
S G A ++ PE F G + K+D +S+G++L E+
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEI 238
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 27/224 (12%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINE 178
KE+ + LG G +G V+ G++ +G+P VAVK L + E F+ E
Sbjct: 17 KEVPRKNITLIRGLGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLME 75
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIF-SKTNSSSHRPLSWEKLK 237
I + +H +IVR +G + R ++ E M G L+ F+ ++ S L+ L
Sbjct: 76 ALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 135
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD---HNFQPKISDFGLAKLCSKDISIV 294
+A +A G +YL + +H DI N LL KI DFG+A +DI
Sbjct: 136 HVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA----RDIYRA 188
Query: 295 SLTAARGTA----GYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
S G A ++ PE F G + K+D +S+G++L E+
Sbjct: 189 SYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEI 230
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 27/224 (12%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINE 178
KE+ + LG G +G V+ G++ +G+P VAVK L + E F+ E
Sbjct: 25 KEVPRKNITLIRGLGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLME 83
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIF-SKTNSSSHRPLSWEKLK 237
I + +H +IVR +G + R ++ E M G L+ F+ ++ S L+ L
Sbjct: 84 ALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 143
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD---HNFQPKISDFGLAKLCSKDISIV 294
+A +A G +YL + +H DI N LL KI DFG+A +DI
Sbjct: 144 HVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA----RDIYRA 196
Query: 295 SLTAARGTA----GYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
S G A ++ PE F G + K+D +S+G++L E+
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEI 238
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 141 LGQGGYGSVFRGKLFN----GIPVAVKMLEHLKGNGQ----EFINEVATIGRIHHFHIVR 192
LG+G +GSV G L + VAVK ++ L + Q EF++E A + H +++R
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMK-LDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 193 LLGFC----SEGTRRALV-YEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
LLG C S+G + +V FM G L ++ + + + + L K +A G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIA 307
EYL N+ LH D+ N +L + ++DFGL+K A+ +IA
Sbjct: 161 EYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 308 PELFSRNFGEVSYKSDVYSYGMMLLEM 334
E + + KSDV+++G+ + E+
Sbjct: 218 IESLADRV--YTSKSDVWAFGVTMWEI 242
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 27/224 (12%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINE 178
KE+ + LG G +G V+ G++ +G+P VAVK L + E F+ E
Sbjct: 40 KEVPRKNITLIRGLGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVYSEQDELDFLME 98
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIF-SKTNSSSHRPLSWEKLK 237
I + +H +IVR +G + R ++ E M G L+ F+ ++ S L+ L
Sbjct: 99 ALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 158
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD---HNFQPKISDFGLAKLCSKDISIV 294
+A +A G +YL + +H DI N LL KI DFG+A +DI
Sbjct: 159 HVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA----RDIYRA 211
Query: 295 SLTAARGTA----GYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
S G A ++ PE F G + K+D +S+G++L E+
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEI 253
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 27/224 (12%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINE 178
KE+ + LG G +G V+ G++ +G+P VAVK L + E F+ E
Sbjct: 40 KEVPRKNITLIRGLGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLME 98
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIF-SKTNSSSHRPLSWEKLK 237
I + +H +IVR +G + R ++ E M G L+ F+ ++ S L+ L
Sbjct: 99 ALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 158
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD---HNFQPKISDFGLAKLCSKDISIV 294
+A +A G +YL + +H DI N LL KI DFG+A +DI
Sbjct: 159 HVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA----RDIYRA 211
Query: 295 SLTAARGTA----GYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
S G A ++ PE F G + K+D +S+G++L E+
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEI 253
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 27/224 (12%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINE 178
KE+ + LG G +G V+ G++ +G+P VAVK L + E F+ E
Sbjct: 26 KEVPRKNITLIRGLGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLME 84
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIF-SKTNSSSHRPLSWEKLK 237
I + +H +IVR +G + R ++ E M G L+ F+ ++ S L+ L
Sbjct: 85 ALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 144
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD---HNFQPKISDFGLAKLCSKDISIV 294
+A +A G +YL + +H DI N LL KI DFG+A +DI
Sbjct: 145 HVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA----RDIYRA 197
Query: 295 SLTAARGTA----GYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
S G A ++ PE F G + K+D +S+G++L E+
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEI 239
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 39/262 (14%)
Query: 99 ESEKEKETQLKVEKFLEDYRTVNPT------RYTYKELKKITSK---FKHRLGQGGYGSV 149
+S + K ++L+ + DY NP + +LK++ K LG G +G V
Sbjct: 8 QSPEYKLSKLRTSTIMTDY---NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEV 64
Query: 150 FRGKLFNGIP-------VAVKMLEHLKGNGQE--FINEVATIGRIHHFHIVRLLGFCSEG 200
+ G++ +G+P VAVK L + E F+ E I + +H +IVR +G +
Sbjct: 65 YEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 123
Query: 201 TRRALVYEFMPNGSLEKFIF-SKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRIL 259
R ++ E M G L+ F+ ++ S L+ L +A +A G +YL + +
Sbjct: 124 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFI 180
Query: 260 HFDIKPHNILLD---HNFQPKISDFGLAKLCSKDISIVSLTAARGTA----GYIAPELFS 312
H DI N LL KI DFG+A +DI G A ++ PE F
Sbjct: 181 HRDIAARNCLLTCPGPGRVAKIGDFGMA----RDIYRAGYYRKGGCAMLPVKWMPPEAFM 236
Query: 313 RNFGEVSYKSDVYSYGMMLLEM 334
G + K+D +S+G++L E+
Sbjct: 237 E--GIFTSKTDTWSFGVLLWEI 256
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 27/224 (12%)
Query: 128 KELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINE 178
KE+ + LG G +G V+ G++ +G+P VAVK L + E F+ E
Sbjct: 26 KEVPRKNITLIRGLGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLME 84
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIF-SKTNSSSHRPLSWEKLK 237
I + +H +IVR +G + R ++ E M G L+ F+ ++ S L+ L
Sbjct: 85 ALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 144
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD---HNFQPKISDFGLAKLCSKDISIV 294
+A +A G +YL + +H DI N LL KI DFG+A +DI
Sbjct: 145 HVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA----QDIYRA 197
Query: 295 SLTAARGTA----GYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
S G A ++ PE F G + K+D +S+G++L E+
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEI 239
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 25/217 (11%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLF----NGIPVAVKMLEHLKGNGQ--EFINEVATIGR 184
+++ + +G+G +G V+ G+ N I A+K L + Q F+ E +
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 185 IHHFHIVRLLGFC--SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG 242
++H +++ L+G EG L+ +M +G L +FI S + + + L I+FG
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDL-------ISFG 130
Query: 243 --VARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK--LCSKDISIVSLTA 298
VARG+EYL Q+ +H D+ N +LD +F K++DFGLA+ L + S+
Sbjct: 131 LQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRH 187
Query: 299 ARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
AR + A E S + KSDV+S+G++L E++
Sbjct: 188 ARLPVKWTALE--SLQTYRFTTKSDVWSFGVLLWELL 222
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 39/262 (14%)
Query: 99 ESEKEKETQLKVEKFLEDYRTVNPT------RYTYKELKKITSK---FKHRLGQGGYGSV 149
+S + K ++L+ + DY NP + +LK++ K LG G +G V
Sbjct: 31 QSPEYKLSKLRTSTIMTDY---NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEV 87
Query: 150 FRGKLFNGIP-------VAVKMLEHLKGNGQE--FINEVATIGRIHHFHIVRLLGFCSEG 200
+ G++ +G+P VAVK L + E F+ E I + +H +IVR +G +
Sbjct: 88 YEGQV-SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146
Query: 201 TRRALVYEFMPNGSLEKFIF-SKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRIL 259
R ++ E M G L+ F+ ++ S L+ L +A +A G +YL + +
Sbjct: 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFI 203
Query: 260 HFDIKPHNILLD---HNFQPKISDFGLAKLCSKDISIVSLTAARGTA----GYIAPELFS 312
H DI N LL KI DFG+A +DI G A ++ PE F
Sbjct: 204 HRDIAARNCLLTCPGPGRVAKIGDFGMA----RDIYRAGYYRKGGCAMLPVKWMPPEAFM 259
Query: 313 RNFGEVSYKSDVYSYGMMLLEM 334
G + K+D +S+G++L E+
Sbjct: 260 E--GIFTSKTDTWSFGVLLWEI 279
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 121
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEIL---L 176
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 121
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEIL---L 176
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 73 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 124
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T Y APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEIL---L 179
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 72 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 123
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T Y APE+
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEIL---L 178
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 121
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + T Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEIL---L 176
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 120
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T Y APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEIL---L 175
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 72 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 123
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + T Y APE+
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEIL---L 178
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 121
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + T Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEIL---L 176
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 120
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + T Y APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEIL---L 175
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 74 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 125
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T Y APE+
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEIL---L 180
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 73 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 124
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T Y APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEIL---L 179
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 71 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 122
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T Y APE+
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEIL---L 177
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 32/224 (14%)
Query: 119 TVNPTRYTYKELKKITSKFKHRLGQGGYGSVF--RGKLFNGIPVAVKML--EHLKGNGQE 174
V R+ E + F+ LG G + V K + VA+K + E L+G
Sbjct: 4 AVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKL-VAIKCIAKEALEGKEGS 62
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSL-----EKFIFSKTNSSSHR 229
NE+A + +I H +IV L G L+ + + G L EK +++ ++S
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--- 119
Query: 230 PLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNIL---LDHNFQPKISDFGLAKL 286
++ F V V+YLH + I+H D+KP N+L LD + + ISDFGL+K+
Sbjct: 120 --------RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
Query: 287 CSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
+D V L+ A GT GY+APE+ ++ S D +S G++
Sbjct: 169 --EDPGSV-LSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 71 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 122
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T Y APE+
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEIL---L 177
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVA---VKMLEHLKGNGQ-EFINEVATIGRIHHFHI 190
+ + ++G+G + V+R L +G+PVA V++ + + + + I E+ + +++H ++
Sbjct: 35 RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNV 94
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYL 250
++ E +V E G L + I K R + + K + +E++
Sbjct: 95 IKYYASFIEDNELNIVLELADAGDLSRMI--KHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 251 HQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDISIVSLTAARGTAGYIAPE 309
H ++R++H DIKP N+ + K+ D GL + SK + SL GT Y++PE
Sbjct: 153 H---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV---GTPYYMSPE 206
Query: 310 LFSRNFGEVSYKSDVYSYGMMLLEMVG 336
N ++KSD++S G +L EM
Sbjct: 207 RIHEN--GYNFKSDIWSLGCLLYEMAA 231
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 71 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 122
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + T Y APE+
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEIL---L 177
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 72 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 123
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + T Y APE+
Sbjct: 124 HRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEIL---L 178
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 32/224 (14%)
Query: 119 TVNPTRYTYKELKKITSKFKHRLGQGGYGSVF--RGKLFNGIPVAVKML--EHLKGNGQE 174
V R+ E + F+ LG G + V K + VA+K + E L+G
Sbjct: 4 AVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKL-VAIKCIAKEALEGKEGS 62
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSL-----EKFIFSKTNSSSHR 229
NE+A + +I H +IV L G L+ + + G L EK +++ ++S
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--- 119
Query: 230 PLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNIL---LDHNFQPKISDFGLAKL 286
++ F V V+YLH + I+H D+KP N+L LD + + ISDFGL+K+
Sbjct: 120 --------RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
Query: 287 CSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
+D V L+ A GT GY+APE+ ++ S D +S G++
Sbjct: 169 --EDPGSV-LSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 71 VIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 122
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T Y APE+
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEIL---L 177
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 73 VIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 124
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T Y APE+
Sbjct: 125 HRVLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEIL---L 179
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 32/224 (14%)
Query: 119 TVNPTRYTYKELKKITSKFKHRLGQGGYGSVF--RGKLFNGIPVAVKML--EHLKGNGQE 174
V R+ E + F+ LG G + V K + VA+K + E L+G
Sbjct: 4 AVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKL-VAIKCIAKEALEGKEGS 62
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSL-----EKFIFSKTNSSSHR 229
NE+A + +I H +IV L G L+ + + G L EK +++ ++S
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--- 119
Query: 230 PLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNIL---LDHNFQPKISDFGLAKL 286
++ F V V+YLH + I+H D+KP N+L LD + + ISDFGL+K+
Sbjct: 120 --------RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
Query: 287 CSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
+D V L+ A GT GY+APE+ ++ S D +S G++
Sbjct: 169 --EDPGSV-LSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKML-EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCS 198
LG+G YG V+ G+ L N + +A+K + E Q E+A + H +IV+ LG S
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 199 EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKK----IAF---GVARGVEYLH 251
E + E +P GSL + SK W LK I F + G++YLH
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSK----------WGPLKDNEQTIGFYTKQILEGLKYLH 139
Query: 252 QGCNQRILHFDIKPHNILLD-HNFQPKISDFGLAK-LCSKDISIVSLTAARGTAGYIAPE 309
+ +I+H DIK N+L++ ++ KISDFG +K L + + T GT Y+APE
Sbjct: 140 ---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPE 193
Query: 310 LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ + +D++S G ++EM
Sbjct: 194 IIDKGPRGYGKAADIWSLGCTIIEMA 219
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 119 TVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRG------KLFNGIPVAVKMLEHLKGNG 172
V R+ E + F+ LG G + V KL +A K LE +G+
Sbjct: 4 AVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSM 63
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSL-----EKFIFSKTNSSS 227
+ NE+A + +I H +IV L G L+ + + G L EK +++ ++S
Sbjct: 64 E---NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS- 119
Query: 228 HRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNIL---LDHNFQPKISDFGLA 284
++ F V V+YLH + I+H D+KP N+L LD + + ISDFGL+
Sbjct: 120 ----------RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Query: 285 KLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
K+ +D V L+ A GT GY+APE+ ++ S D +S G++
Sbjct: 167 KM--EDPGSV-LSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 20/207 (9%)
Query: 139 HRLGQGGYGSVFRGKLFNGIPVA----VKMLEHLKGNGQEFINEVATIGRIHHFHIVRLL 194
++G+G YG+VF+ K + V++ + +G + E+ + + H +IVRL
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
+ LV+EF + L+K+ F N L E +K F + +G+ + H
Sbjct: 68 DVLHSDKKLTLVFEFC-DQDLKKY-FDSCNGD----LDPEIVKSFLFQLLKGLGFCH--- 118
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
++ +LH D+KP N+L++ N + K++DFGLA+ + I + +A T Y P++
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLAR--AFGIPVRCYSAEVVTLWYRPPDVL--- 173
Query: 315 FGEVSYKS--DVYSYGMMLLEMVGCRK 339
FG Y + D++S G + E+ +
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAAR 200
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAE--------IVSALE 146
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + + GTA Y++P
Sbjct: 147 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + S SD+++ G ++ ++V
Sbjct: 204 ELLTEK--SASKSSDLWALGCIIYQLVA 229
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 141 LGQGGYGSVFR--GKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCS 198
LG+G +G + + + V +++ + + F+ EV + + H ++++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 199 EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRI 258
+ R + E++ G+L I K+ S + W + A +A G+ YLH + I
Sbjct: 78 KDKRLNFITEYIKGGTLRGII--KSMDSQY---PWSQRVSFAKDIASGMAYLH---SMNI 129
Query: 259 LHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS----IVSLTAAR--------GTAGYI 306
+H D+ HN L+ N ++DFGLA+L + + + SL G ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 307 APELFS-RNFGEVSYKSDVYSYGMMLLEMVGCRKNKDP 343
APE+ + R++ E K DV+S+G++L E++G R N DP
Sbjct: 190 APEMINGRSYDE---KVDVFSFGIVLCEIIG-RVNADP 223
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 144
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + A GTA Y++P
Sbjct: 145 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP 201
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 202 ELLTEK--SACKSSDLWALGCIIYQLVA 227
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKML-EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCS 198
LG+G YG V+ G+ L N + +A+K + E Q E+A + H +IV+ LG S
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 199 EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKK----IAF---GVARGVEYLH 251
E + E +P GSL + SK W LK I F + G++YLH
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSK----------WGPLKDNEQTIGFYTKQILEGLKYLH 125
Query: 252 QGCNQRILHFDIKPHNILLD-HNFQPKISDFGLAK-LCSKDISIVSLTAARGTAGYIAPE 309
+ +I+H DIK N+L++ ++ KISDFG +K L + + T GT Y+APE
Sbjct: 126 ---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPE 179
Query: 310 LFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ + +D++S G ++EM
Sbjct: 180 IIDKGPRGYGKAADIWSLGCTIIEMA 205
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+ F+ + + PL +K F + +G+ + H +
Sbjct: 73 VIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 124
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T Y APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEIL---L 179
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 103/205 (50%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+ F+ + + PL +K F + +G+ + H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 121
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + T Y APE+
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEIL---L 176
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+ F+ + + PL +K F + +G+ + H +
Sbjct: 73 VIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 124
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T Y APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEIL---L 179
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+EF+ + L+ F+ + + PL +K F + +G+ + H +
Sbjct: 72 VIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 123
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T Y APE+
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEIL---L 178
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 23/228 (10%)
Query: 111 EKFLEDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK 169
E+ LE R++ + + KK ++F+ ++GQG G+V+ + G VA++ + +
Sbjct: 3 EEILEKLRSI----VSVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQ 57
Query: 170 GNGQEFI-NEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSH 228
+E I NE+ + + +IV L G +V E++ GSL T+ +
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL-------TDVVTE 110
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
+ ++ + + +E+LH + +++H DIK NILL + K++DFG +
Sbjct: 111 TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167
Query: 289 KDISIVSLTAARGTAGYIAPELFSRN-FGEVSYKSDVYSYGMMLLEMV 335
+ S S GT ++APE+ +R +G K D++S G+M +EM+
Sbjct: 168 PEQSKRSXMV--GTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEMI 210
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 23/228 (10%)
Query: 111 EKFLEDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK 169
E+ LE R++ + + KK ++F+ ++GQG G+V+ + G VA++ + +
Sbjct: 3 EEILEKLRSI----VSVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQ 57
Query: 170 GNGQEFI-NEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSH 228
+E I NE+ + + +IV L G +V E++ GSL T+ +
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL-------TDVVTE 110
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
+ ++ + + +E+LH + +++H DIK NILL + K++DFG +
Sbjct: 111 TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167
Query: 289 KDISIVSLTAARGTAGYIAPELFSRN-FGEVSYKSDVYSYGMMLLEMV 335
+ S S GT ++APE+ +R +G K D++S G+M +EM+
Sbjct: 168 PEQSKRSTMV--GTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEMI 210
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE-HLKGNGQEFINEVATIGRIHHFHIVRLLGFC 197
LG G +G V++ K G A K++E + +++I E+ + H +IV+LLG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
+ ++ EF P G+++ + R L+ +++ + + + +LH ++R
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIML-----ELDRGLTEPQIQVVCRQMLEALNFLH---SKR 129
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLA----KLCSKDISIVSLTAARGTAGYIAPELF-- 311
I+H D+K N+L+ +++DFG++ K K S + GT ++APE+
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMC 183
Query: 312 -SRNFGEVSYKSDVYSYGMMLLEM 334
+ YK+D++S G+ L+EM
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 23/228 (10%)
Query: 111 EKFLEDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK 169
E+ LE R++ + + KK ++F+ ++GQG G+V+ + G VA++ + +
Sbjct: 4 EEILEKLRSI----VSVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQ 58
Query: 170 GNGQEFI-NEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSH 228
+E I NE+ + + +IV L G +V E++ GSL T+ +
Sbjct: 59 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL-------TDVVTE 111
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
+ ++ + + +E+LH + +++H DIK NILL + K++DFG +
Sbjct: 112 TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 168
Query: 289 KDISIVSLTAARGTAGYIAPELFSRN-FGEVSYKSDVYSYGMMLLEMV 335
+ S S GT ++APE+ +R +G K D++S G+M +EM+
Sbjct: 169 PEQSKRSXMV--GTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEMI 211
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 23/203 (11%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLE-HLKGNGQEFINEVATIGRIHHFHIVRLLGFCS 198
LG G +G V++ K G A K++E + +++I E+ + H +IV+LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 199 EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRI 258
+ ++ EF P G+++ + R L+ +++ + + + +LH ++RI
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIML-----ELDRGLTEPQIQVVCRQMLEALNFLH---SKRI 138
Query: 259 LHFDIKPHNILLDHNFQPKISDFGLA----KLCSKDISIVSLTAARGTAGYIAPELF--- 311
+H D+K N+L+ +++DFG++ K K S + GT ++APE+
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMCE 192
Query: 312 SRNFGEVSYKSDVYSYGMMLLEM 334
+ YK+D++S G+ L+EM
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEM 215
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 146
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + GTA Y++P
Sbjct: 147 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + S SD+++ G ++ ++V
Sbjct: 204 ELLTEKSAXKS--SDLWALGCIIYQLVA 229
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 147
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + + GTA Y++P
Sbjct: 148 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 204
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 205 ELLTEK--SACKSSDLWALGCIIYQLVA 230
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 103/205 (50%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+E + + L+KF+ + + PL +K F + +G+ + H +
Sbjct: 73 VIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 124
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + T Y APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEIL---L 179
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 34/237 (14%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLF--------NGIPVAVKMLEHLKGNG 172
+PT + + LKKI LG+G +G V L+ G VAVK L+ G
Sbjct: 24 DPTVFHKRYLKKIRD-----LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKADAGPQ 75
Query: 173 QE--FINEVATIGRIHHFHIVRLLGFCSEGTRRAL--VYEFMPNGSLEKFIFSKTNSSSH 228
+ E+ + ++H HI++ G C + +L V E++P GSL ++
Sbjct: 76 HRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-------PR 128
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
+ +L A + G+ YLH Q +H D+ N+LLD++ KI DFGLAK
Sbjct: 129 HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185
Query: 289 KDISIVSL-TAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDP 343
+ + + APE + Y SDV+S+G+ L E++ C ++ P
Sbjct: 186 EGHEXYRVREDGDSPVFWYAPECLKEY--KFYYASDVWSFGVTLYELLTHCDSSQSP 240
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQEFI----NEVATIGRIHHFHIVRLLG 195
LG G +G V GK G VAVK+L K + + E+ + H HI++L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
S + +V E++ G L +I L ++ +++ + GV+Y H+
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGR------LDEKESRRLFQQILSGVDYCHR--- 134
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
++H D+KP N+LLD + KI+DFGL+ + S L + G+ Y APE+ S
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---EFLRXSCGSPNYAAPEVISGRL 191
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ D++S G++L ++
Sbjct: 192 -YAGPEVDIWSSGVILYALL 210
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 110/217 (50%), Gaps = 31/217 (14%)
Query: 134 TSKFKH--RLGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQE-----FINEVATIGRI 185
TS+++ +G G YG+V++ + +G VA+K + NG+E + EVA + R+
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRL 60
Query: 186 HHF---HIVRLLGFCSEG-----TRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
F ++VRL+ C+ + LV+E + + L ++ + + L E +K
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL----DKAPPPGLPAETIK 115
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT 297
+ RG+++LH C I+H D+KP NIL+ K++DFGLA++ S +++ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVV 172
Query: 298 AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
T Y APE+ ++ + D++S G + EM
Sbjct: 173 V---TLWYRAPEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 38/239 (15%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNGIP--------VAVKMLEHLKGNG 172
+PT + + LKKI LG+G +G V L+ P VAVK L+ +G G
Sbjct: 2 DPTVFHKRYLKKIRD-----LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALK--EGCG 51
Query: 173 QE----FINEVATIGRIHHFHIVRLLGFCSEGTRRA--LVYEFMPNGSLEKFIFSKTNSS 226
+ + E+ + ++H HIV+ G C + ++ LV E++P GSL ++
Sbjct: 52 PQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL------- 104
Query: 227 SHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKL 286
+ +L A + G+ YLH Q +H + N+LLD++ KI DFGLAK
Sbjct: 105 PRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKA 161
Query: 287 CSKDISIVSLTA-ARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDP 343
+ + + APE + Y SDV+S+G+ L E++ C N+ P
Sbjct: 162 VPEGHEYYRVREDGDSPVFWYAPECLKE--CKFYYASDVWSFGVTLYELLTYCDSNQSP 218
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 143
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + + GTA Y++P
Sbjct: 144 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 200
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 201 ELLTEK--SACKSSDLWALGCIIYQLVA 226
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 38/239 (15%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNGIP--------VAVKMLEHLKGNG 172
+PT + + LKKI LG+G +G V L+ P VAVK L+ +G G
Sbjct: 1 DPTVFHKRYLKKIRD-----LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALK--EGCG 50
Query: 173 QE----FINEVATIGRIHHFHIVRLLGFCSEGTRRA--LVYEFMPNGSLEKFIFSKTNSS 226
+ + E+ + ++H HIV+ G C + ++ LV E++P GSL ++
Sbjct: 51 PQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL------- 103
Query: 227 SHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKL 286
+ +L A + G+ YLH Q +H + N+LLD++ KI DFGLAK
Sbjct: 104 PRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKA 160
Query: 287 CSKDISIVSLTA-ARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDP 343
+ + + APE + Y SDV+S+G+ L E++ C N+ P
Sbjct: 161 VPEGHEYYRVREDGDSPVFWYAPECLKE--CKFYYASDVWSFGVTLYELLTYCDSNQSP 217
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 168 LKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSL----EKFIFSKT 223
+K +F NE+ I I + + + G + ++YE+M N S+ E F
Sbjct: 83 IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK 142
Query: 224 NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL 283
N + P+ + +K I V Y+H N I H D+KP NIL+D N + K+SDFG
Sbjct: 143 NYTCFIPI--QVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGE 198
Query: 284 AK-LCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
++ + K I +RGT ++ PE FS K D++S G+ L M
Sbjct: 199 SEYMVDKKIK-----GSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM 245
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 19/205 (9%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE---HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G YG V++ + G VA+K + +G I E++ + ++H +IV+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ LV+E + + L+ F+ + + PL +K F + +G+ + H +
Sbjct: 69 VIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPL----IKSYLFQLLQGLAFCH---S 120
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
R+LH D+KP N+L++ K++DFGLA+ + + + + T T Y APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEIL---L 175
Query: 316 GEVSYKS--DVYSYGMMLLEMVGCR 338
G Y + D++S G + EMV R
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVF--RGKLFNGIPVAVKML------EHLKGNGQEFINEVATIGRIHHFHIVR 192
LG+G + +V+ R K N I VA+K + E G + + E+ + + H +I+
Sbjct: 18 LGEGQFATVYKARDKNTNQI-VAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 193 LLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
LL + +LV++FM LE I K NS P +K +G+EYLHQ
Sbjct: 77 LLDAFGHKSNISLVFDFM-ETDLEVII--KDNSLVLTP---SHIKAYMLMTLQGLEYLHQ 130
Query: 253 GCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDISIVSLTAARGTAGYIAPELF 311
ILH D+KP+N+LLD N K++DFGLAK S + + R Y APEL
Sbjct: 131 ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTR---WYRAPELL 184
Query: 312 SRNFGEVSY--KSDVYSYGMMLLEMV 335
FG Y D+++ G +L E++
Sbjct: 185 ---FGARMYGVGVDMWAVGCILAELL 207
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 23/228 (10%)
Query: 111 EKFLEDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK 169
E+ LE R++ + + KK ++F+ ++GQG G+V+ + G VA++ + +
Sbjct: 3 EEILEKLRSI----VSVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQ 57
Query: 170 GNGQEFI-NEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSH 228
+E I NE+ + + +IV L G +V E++ GSL T+ +
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL-------TDVVTE 110
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
+ ++ + + +E+LH + +++H DIK NILL + K++DFG +
Sbjct: 111 TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167
Query: 289 KDISIVSLTAARGTAGYIAPELFSRN-FGEVSYKSDVYSYGMMLLEMV 335
+ S S GT ++APE+ +R +G K D++S G+M +EM+
Sbjct: 168 PEQSKRSEMV--GTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEMI 210
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 40 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 99
Query: 191 VRLLGFCSEGTRRALV-YEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGV 247
V+L FC + + + NG L K+I + + R + E + +
Sbjct: 100 VKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSAL 150
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIA 307
EYLH + I+H D+KP NILL+ + +I+DFG AK+ S + GTA Y++
Sbjct: 151 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 207
Query: 308 PELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
PEL + SD+++ G ++ ++V
Sbjct: 208 PELLTEK--SACKSSDLWALGCIIYQLVA 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 10 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 69
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 70 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 121
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + GTA Y++P
Sbjct: 122 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 178
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 179 ELLTEK--SACKSSDLWALGCIIYQLVA 204
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 43/220 (19%)
Query: 128 KELKKITSKFKHRLGQGGYGSVF------RGKLFNGIPVAVKML--EHLKGNGQEFINEV 179
+++KKI +FK LG G + V GKLF AVK + + LKG NE+
Sbjct: 18 EDIKKIF-EFKETLGTGAFSEVVLAEEKATGKLF-----AVKCIPKKALKGKESSIENEI 71
Query: 180 ATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSL-----EKFIFSKTNSSSHRPLSWE 234
A + +I H +IV L LV + + G L EK +++ ++S+
Sbjct: 72 AVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST------- 124
Query: 235 KLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILL---DHNFQPKISDFGLAKLCSK-D 290
+ V V YLH+ I+H D+KP N+L D + ISDFGL+K+ K D
Sbjct: 125 ----LIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177
Query: 291 ISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
+ ++ A GT GY+APE+ ++ S D +S G++
Sbjct: 178 V----MSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 211
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 11 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 71 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 122
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + GTA Y++P
Sbjct: 123 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 179
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 180 ELLTEK--SACKSSDLWALGCIIYQLVA 205
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 144
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + GTA Y++P
Sbjct: 145 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 202 ELLTEK--SACKSSDLWALGCIIYQLVA 227
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 12 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 71
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 72 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 123
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + GTA Y++P
Sbjct: 124 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 180
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 181 ELLTEK--SACKSSDLWALGCIIYQLVA 206
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 137 FKHRLGQGGYGSV-FRGKLFNGIPVAVKMLEHLKGN--GQEFINEVATIGRIHHFHIVRL 193
FK +LG G +G V + +G+ +K + + ++ E+ + + H +I+++
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
+ +V E G L + I S + + LS + ++ + + Y H
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSA--QARGKALSEGYVAELMKQMMNALAYFH-- 141
Query: 254 CNQRILHFDIKPHNILLDHNFQP----KISDFGLAKLCSKDISIVSLTAARGTAGYIAPE 309
+Q ++H D+KP NIL + P KI DFGLA+L D T A GTA Y+APE
Sbjct: 142 -SQHVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSD---EHSTNAAGTALYMAPE 196
Query: 310 LFSRNFGEVSYKSDVYSYG-MMLLEMVGC 337
+F R+ V++K D++S G +M + GC
Sbjct: 197 VFKRD---VTFKCDIWSAGVVMYFLLTGC 222
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 146
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + GTA Y++P
Sbjct: 147 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 204 ELLTEK--SACKSSDLWALGCIIYQLVA 229
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 13 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 72
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 73 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 124
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + GTA Y++P
Sbjct: 125 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 181
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 182 ELLTEK--SACKSSDLWALGCIIYQLVA 207
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 143
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + GTA Y++P
Sbjct: 144 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 200
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 201 ELLTEK--SACKSSDLWALGCIIYQLVA 226
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 144
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + GTA Y++P
Sbjct: 145 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 202 ELLTEK--SACKSSDLWALGCIIYQLVA 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 17 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 76
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 77 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 128
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + GTA Y++P
Sbjct: 129 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 185
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 186 ELLTEK--SACKSSDLWALGCIIYQLVA 211
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 110/217 (50%), Gaps = 31/217 (14%)
Query: 134 TSKFKH--RLGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQE-----FINEVATIGRI 185
TS+++ +G G YG+V++ + +G VA+K + NG+E + EVA + R+
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRL 60
Query: 186 HHF---HIVRLLGFCSEG-----TRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
F ++VRL+ C+ + LV+E + + L ++ + + L E +K
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL----DKAPPPGLPAETIK 115
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT 297
+ RG+++LH C I+H D+KP NIL+ K++DFGLA++ S +++ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVV 172
Query: 298 AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
T Y APE+ ++ + D++S G + EM
Sbjct: 173 V---TLWYRAPEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 139 HRLGQGGYGSVFRGKLFNGIPVA----VKMLEHLKGNGQEFINEVATIGRIHHFHIVRLL 194
++G+G YG+VF+ K + V++ + +G + E+ + + H +IVRL
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
+ LV+EF + L+K+ F N L E +K F + +G+ + H
Sbjct: 68 DVLHSDKKLTLVFEFC-DQDLKKY-FDSCNGD----LDPEIVKSFLFQLLKGLGFCH--- 118
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
++ +LH D+KP N+L++ N + K+++FGLA+ + I + +A T Y P++
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLAR--AFGIPVRCYSAEVVTLWYRPPDVL--- 173
Query: 315 FGEVSYKS--DVYSYGMMLLEMVG 336
FG Y + D++S G + E+
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELAN 197
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 146
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + GTA Y++P
Sbjct: 147 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 204 ELLTEK--SACKSSDLWALGCIIYQLVA 229
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 146
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + GTA Y++P
Sbjct: 147 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 204 ELLTEK--SACKSSDLWALGCIIYQLVA 229
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 38 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 97
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 98 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 149
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + GTA Y++P
Sbjct: 150 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 206
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 207 ELLTEK--SACKSSDLWALGCIIYQLVA 232
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 147
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + GTA Y++P
Sbjct: 148 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 204
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 205 ELLTEK--SACKSSDLWALGCIIYQLVA 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + +V + L A+K+LE +K N ++ E + R+ H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 146
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + GTA Y++P
Sbjct: 147 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 204 ELLTEK--SACKSSDLWALGCIIYQLVA 229
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 24/202 (11%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINEVAT-----IGRIHHFHIVRLL 194
+G+G YG V + + + G VA+K + L+ + + + ++A + ++ H ++V LL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIK--KFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
C + R LV+EF+ + L+ L ++ ++K F + G+ + H
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELFPNG------LDYQVVQKYLFQIINGIGFCH--- 141
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
+ I+H DIKP NIL+ + K+ DFG A+ + + A T Y APEL
Sbjct: 142 SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA--TRWYRAPELL--- 196
Query: 315 FGEVSY--KSDVYSYGMMLLEM 334
G+V Y DV++ G ++ EM
Sbjct: 197 VGDVKYGKAVDVWAIGCLVTEM 218
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 18/201 (8%)
Query: 141 LGQGGYGSVFRGKLFN----GIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLL 194
+G+G +G V +G + + VA+K ++ + ++F+ E T+ + H HIV+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
G +E ++ E G L F+ + S L L A+ ++ + YL
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAYLE--- 128
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
++R +H DI N+L+ N K+ DFGL++ +D + + + ++APE S N
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPE--SIN 185
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
F + SDV+ +G+ + E++
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 34/237 (14%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNGIP--------VAVKMLEHLKGNG 172
+PT + + LKKI LG+G +G V L+ P VAVK L+ G
Sbjct: 7 DPTVFHKRYLKKIRD-----LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKADCGPQ 58
Query: 173 QE--FINEVATIGRIHHFHIVRLLGFCSEGTRRAL--VYEFMPNGSLEKFIFSKTNSSSH 228
+ E+ + ++H HI++ G C + ++L V E++P GSL ++
Sbjct: 59 HRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-------PR 111
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
+ +L A + G+ YLH +Q +H ++ N+LLD++ KI DFGLAK
Sbjct: 112 HSIGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP 168
Query: 289 KDISIVSL-TAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDP 343
+ + + APE + Y SDV+S+G+ L E++ C ++ P
Sbjct: 169 EGHEYYRVREDGDSPVFWYAPECLKEY--KFYYASDVWSFGVTLYELLTHCDSSQSP 223
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 18/201 (8%)
Query: 141 LGQGGYGSVFRGKLFN----GIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLL 194
+G+G +G V +G + + VA+K ++ + ++F+ E T+ + H HIV+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
G +E ++ E G L F+ + S L L A+ ++ + YL
Sbjct: 75 GVITENPV-WIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAYLE--- 125
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
++R +H DI N+L+ N K+ DFGL++ +D + + + ++APE S N
Sbjct: 126 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPE--SIN 182
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
F + SDV+ +G+ + E++
Sbjct: 183 FRRFTSASDVWMFGVCMWEIL 203
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 18/201 (8%)
Query: 141 LGQGGYGSVFRGKLFN----GIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLL 194
+G+G +G V +G + + VA+K ++ + ++F+ E T+ + H HIV+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
G +E ++ E G L F+ + S L L A+ ++ + YL
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKFS-----LDLASLILYAYQLSTALAYLE--- 128
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
++R +H DI N+L+ N K+ DFGL++ +D + + + ++APE S N
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTXXKASKGKLPIKWMAPE--SIN 185
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
F + SDV+ +G+ + E++
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 18/201 (8%)
Query: 141 LGQGGYGSVFRGKLFN----GIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLL 194
+G+G +G V +G + + VA+K ++ + ++F+ E T+ + H HIV+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
G +E ++ E G L F+ + S L L A+ ++ + YL
Sbjct: 81 GVITENPV-WIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAYLE--- 131
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
++R +H DI N+L+ N K+ DFGL++ +D + + + ++APE S N
Sbjct: 132 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPE--SIN 188
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
F + SDV+ +G+ + E++
Sbjct: 189 FRRFTSASDVWMFGVCMWEIL 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 18/201 (8%)
Query: 141 LGQGGYGSVFRGKLFN----GIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLL 194
+G+G +G V +G + + VA+K ++ + ++F+ E T+ + H HIV+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
G +E ++ E G L F+ + S L L A+ ++ + YL
Sbjct: 80 GVITENPV-WIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAYLE--- 130
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
++R +H DI N+L+ N K+ DFGL++ +D + + + ++APE S N
Sbjct: 131 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPE--SIN 187
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
F + SDV+ +G+ + E++
Sbjct: 188 FRRFTSASDVWMFGVCMWEIL 208
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 110/217 (50%), Gaps = 31/217 (14%)
Query: 134 TSKFKH--RLGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQE-----FINEVATIGRI 185
TS+++ +G G YG+V++ + +G VA+K + NG+E + EVA + R+
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRL 60
Query: 186 HHF---HIVRLLGFCSEG-----TRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
F ++VRL+ C+ + LV+E + + L ++ + + L E +K
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL----DKAPPPGLPAETIK 115
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT 297
+ RG+++LH C I+H D+KP NIL+ K++DFGLA++ S +++ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVV 172
Query: 298 AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
T Y APE+ ++ + D++S G + EM
Sbjct: 173 V---TLWYRAPEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 18/201 (8%)
Query: 141 LGQGGYGSVFRGKLFN----GIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLL 194
+G+G +G V +G + + VA+K ++ + ++F+ E T+ + H HIV+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
G +E ++ E G L F+ + S L L A+ ++ + YL
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAYLE--- 128
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
++R +H DI N+L+ N K+ DFGL++ +D + + + ++APE S N
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPE--SIN 185
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
F + SDV+ +G+ + E++
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 18/201 (8%)
Query: 141 LGQGGYGSVFRGKLFN----GIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLL 194
+G+G +G V +G + + VA+K ++ + ++F+ E T+ + H HIV+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
G +E ++ E G L F+ + S L L A+ ++ + YL
Sbjct: 106 GVITENPV-WIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAYLE--- 156
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
++R +H DI N+L+ N K+ DFGL++ +D + + + ++APE S N
Sbjct: 157 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPE--SIN 213
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
F + SDV+ +G+ + E++
Sbjct: 214 FRRFTSASDVWMFGVCMWEIL 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 18/201 (8%)
Query: 141 LGQGGYGSVFRGKLFN----GIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLL 194
+G+G +G V +G + + VA+K ++ + ++F+ E T+ + H HIV+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
G +E ++ E G L F+ + S L L A+ ++ + YL
Sbjct: 83 GVITENPV-WIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAYLE--- 133
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
++R +H DI N+L+ N K+ DFGL++ +D + + + ++APE S N
Sbjct: 134 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPE--SIN 190
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
F + SDV+ +G+ + E++
Sbjct: 191 FRRFTSASDVWMFGVCMWEIL 211
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 136 KFKHRLGQGGYGS-VFRGKLFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHI 190
KF LG+G + + V +L A+K+LE +K N ++ E + R+ H
Sbjct: 33 KFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFI--FSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
V+L + + + NG L K+I + + R + E + +E
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IVSALE 144
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
YLH + I+H D+KP NILL+ + +I+DFG AK+ S + GTA Y++P
Sbjct: 145 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
EL + SD+++ G ++ ++V
Sbjct: 202 ELLTEK--SACKSSDLWALGCIIYQLVA 227
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 29/203 (14%)
Query: 140 RLGQGGYGSVF--RGKLFNGIPVAVKMLEH----LKGNGQEFINEVATIGRIHHFHIVRL 193
+LG G YG V + KL G A+K+++ N ++EVA + ++ H +I++L
Sbjct: 11 KLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 194 LGFCSEGTRRALVYEFMPNGSL-EKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
F + LV E G L ++ I + S + I V G YLH+
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-------IMKQVLSGTTYLHK 122
Query: 253 GCNQRILHFDIKPHNILLDHNFQP---KISDFGLAKLCSKDISIVSLTAAR-GTAGYIAP 308
I+H D+KP N+LL+ + KI DFGL S + R GTA YIAP
Sbjct: 123 ---HNIVHRDLKPENLLLESKSRDALIKIVDFGL----SAHFEVGGKMKERLGTAYYIAP 175
Query: 309 ELFSRNFGEVSYKSDVYSYGMML 331
E+ + + E K DV+S G++L
Sbjct: 176 EVLRKKYDE---KCDVWSCGVIL 195
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQEFINEVATIGRI-HHFHIVRLLG-FC 197
+G G YG V++G+ + G A+K+++ +E E+ + + HH +I G F
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 198 SEG-----TRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
+ + LV EF GS+ I + ++ L E + I + RG+ +LHQ
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT----LKEEWIAYICREILRGLSHLHQ 147
Query: 253 GCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS 312
+++H DIK N+LL N + K+ DFG++ D ++ GT ++APE+ +
Sbjct: 148 ---HKVIHRDIKGQNVLLTENAEVKLVDFGVS--AQLDRTVGRRNTFIGTPYWMAPEVIA 202
Query: 313 ---RNFGEVSYKSDVYSYGMMLLEMV 335
+KSD++S G+ +EM
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMA 228
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 34/237 (14%)
Query: 121 NPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNGIP--------VAVKMLEHLKGNG 172
+PT + + LKKI LG+G +G V L+ P VAVK L+ G
Sbjct: 7 DPTVFHKRYLKKIRD-----LGEGHFGKV---SLYCYDPTNDGTGEMVAVKALKADCGPQ 58
Query: 173 QE--FINEVATIGRIHHFHIVRLLGFCSEGTRRAL--VYEFMPNGSLEKFIFSKTNSSSH 228
+ E+ + ++H HI++ G C + ++L V E++P GSL ++
Sbjct: 59 HRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-------PR 111
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
+ +L A + G+ YLH Q +H ++ N+LLD++ KI DFGLAK
Sbjct: 112 HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP 168
Query: 289 KDISIVSL-TAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG-CRKNKDP 343
+ + + APE + Y SDV+S+G+ L E++ C ++ P
Sbjct: 169 EGHEYYRVREDGDSPVFWYAPECLKEY--KFYYASDVWSFGVTLYELLTHCDSSQSP 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNG------QEFINEVATIGR 184
+K+ + LG G +G+V +G V ++ LK E + E + +
Sbjct: 25 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 84
Query: 185 IHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
+ + +IVR++G C E LV E G L K++ +R + + + ++ V+
Sbjct: 85 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 137
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV-SLTAARGTA 303
G++YL + +H D+ N+LL KISDFGL+K D + + T +
Sbjct: 138 MGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLE 333
+ APE N+ + S KSDV+S+G+++ E
Sbjct: 195 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNG------QEFINEVATIGR 184
+K+ + LG G +G+V +G V ++ LK E + E + +
Sbjct: 25 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 84
Query: 185 IHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
+ + +IVR++G C E LV E G L K++ +R + + + ++ V+
Sbjct: 85 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 137
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV-SLTAARGTA 303
G++YL + +H D+ N+LL KISDFGL+K D + + T +
Sbjct: 138 MGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLE 333
+ APE N+ + S KSDV+S+G+++ E
Sbjct: 195 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 222
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 22/198 (11%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQE---FINEVATIGRIHHFHIVRLLGF 196
LG+G +G V + K AVK++ ++ + EV + ++ H +I++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
+ + +V E G L I + S H +I V G+ Y+H+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA------ARIIKQVFSGITYMHK---H 140
Query: 257 RILHFDIKPHNILL---DHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
I+H D+KP NILL + + KI DFGL+ ++ + GTA YIAPE+
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLRG 197
Query: 314 NFGEVSYKSDVYSYGMML 331
+ E K DV+S G++L
Sbjct: 198 TYDE---KCDVWSAGVIL 212
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH G
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH-GIG-- 125
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 186 AE-PVDVWSCGIVLTAMLA 203
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 22/198 (11%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQE---FINEVATIGRIHHFHIVRLLGF 196
LG+G +G V + K AVK++ ++ + EV + ++ H +I++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
+ + +V E G L I + S H +I V G+ Y+H+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA------ARIIKQVFSGITYMHK---H 140
Query: 257 RILHFDIKPHNILL---DHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
I+H D+KP NILL + + KI DFGL+ ++ + GTA YIAPE+
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLRG 197
Query: 314 NFGEVSYKSDVYSYGMML 331
+ E K DV+S G++L
Sbjct: 198 TYDE---KCDVWSAGVIL 212
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 27/202 (13%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLEH----LKGNGQEFINEVATIGRIHHFHIVRLL 194
+LG G YG V K G A+K+++ N ++EVA + ++ H +I++L
Sbjct: 28 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 195 GFCSEGTRRALVYEFMPNGSL-EKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
F + LV E G L ++ I + S + I V G YLH+
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-------IMKQVLSGTTYLHK- 139
Query: 254 CNQRILHFDIKPHNILLDHNFQP---KISDFGLAKLCSKDISIVSLTAAR-GTAGYIAPE 309
I+H D+KP N+LL+ + KI DFGL S + R GTA YIAPE
Sbjct: 140 --HNIVHRDLKPENLLLESKSRDALIKIVDFGL----SAHFEVGGKMKERLGTAYYIAPE 193
Query: 310 LFSRNFGEVSYKSDVYSYGMML 331
+ + + E K DV+S G++L
Sbjct: 194 VLRKKYDE---KCDVWSCGVIL 212
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 110/227 (48%), Gaps = 20/227 (8%)
Query: 115 EDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN----GIPVAVKMLEHLKG 170
ED T+ TR E+++ + +G+G +G V +G + + VA+K ++
Sbjct: 374 EDTYTMPSTRDY--EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS 431
Query: 171 NG--QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSH 228
+ ++F+ E T+ + H HIV+L+G +E ++ E G L F+ + S
Sbjct: 432 DSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFS--- 487
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
L L A+ ++ + YL ++R +H DI N+L+ N K+ DFGL++
Sbjct: 488 --LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM- 541
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+D + + + ++APE S NF + SDV+ +G+ + E++
Sbjct: 542 EDSTYYKASKGKLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEIL 586
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH G
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH-GIG-- 124
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 185 AE-PVDVWSCGIVLTAMLA 202
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNG------QEFINEVATIGR 184
+K+ + LG G +G+V +G V ++ LK E + E + +
Sbjct: 5 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 64
Query: 185 IHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
+ + +IVR++G C E LV E G L K++ +R + + + ++ V+
Sbjct: 65 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 117
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV-SLTAARGTA 303
G++YL + +H D+ N+LL KISDFGL+K D + + T +
Sbjct: 118 MGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 174
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLE 333
+ APE N+ + S KSDV+S+G+++ E
Sbjct: 175 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 202
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNG------QEFINEVATIGR 184
+K+ + LG G +G+V +G V ++ LK E + E + +
Sbjct: 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 74
Query: 185 IHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
+ + +IVR++G C E LV E G L K++ +R + + + ++ V+
Sbjct: 75 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 127
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV-SLTAARGTA 303
G++YL + +H D+ N+LL KISDFGL+K D + + T +
Sbjct: 128 MGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 184
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLE 333
+ APE N+ + S KSDV+S+G+++ E
Sbjct: 185 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 212
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNG------QEFINEVATIGR 184
+K+ + LG G +G+V +G V ++ LK E + E + +
Sbjct: 23 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 82
Query: 185 IHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
+ + +IVR++G C E LV E G L K++ +R + + + ++ V+
Sbjct: 83 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 135
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV-SLTAARGTA 303
G++YL + +H D+ N+LL KISDFGL+K D + + T +
Sbjct: 136 MGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 192
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLE 333
+ APE N+ + S KSDV+S+G+++ E
Sbjct: 193 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 220
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH G
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH-GIG-- 124
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 185 AE-PVDVWSCGIVLTAMLA 202
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 34/213 (15%)
Query: 141 LGQGGYGSVF------RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLL 194
LG+GG+G VF GKL+ + K L+ KG Q + E + ++H IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY-QGAMVEKKILAKVHSRFIVSLA 251
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARGVEYLHQ 252
T LV M G + I+ N P +++ + I + + G+E+LHQ
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIY---NVDEDNP-GFQEPRAIFYTAQIVSGLEHLHQ 307
Query: 253 GCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR-------GTAGY 305
+ I++ D+KP N+LLD + +ISD GLA V L A + GT G+
Sbjct: 308 ---RNIIYRDLKPENVLLDDDGNVRISDLGLA---------VELKAGQTKTKGYAGTPGF 355
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
+APEL E + D ++ G+ L EM+ R
Sbjct: 356 MAPELLLGE--EYDFSVDYFALGVTLYEMIAAR 386
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNG------QEFINEVATIGR 184
+K+ + LG G +G+V +G V ++ LK E + E + +
Sbjct: 3 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 62
Query: 185 IHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
+ + +IVR++G C E LV E G L K++ +R + + + ++ V+
Sbjct: 63 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 115
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV-SLTAARGTA 303
G++YL + +H D+ N+LL KISDFGL+K D + + T +
Sbjct: 116 MGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 172
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLE 333
+ APE N+ + S KSDV+S+G+++ E
Sbjct: 173 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 200
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNG------QEFINEVATIGR 184
+K+ + LG G +G+V +G V ++ LK E + E + +
Sbjct: 9 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 68
Query: 185 IHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
+ + +IVR++G C E LV E G L K++ +R + + + ++ V+
Sbjct: 69 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 121
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV-SLTAARGTA 303
G++YL + +H D+ N+LL KISDFGL+K D + + T +
Sbjct: 122 MGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 178
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLE 333
+ APE N+ + S KSDV+S+G+++ E
Sbjct: 179 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 206
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNG------QEFINEVATIGR 184
+K+ + LG G +G+V +G V ++ LK E + E + +
Sbjct: 9 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 68
Query: 185 IHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
+ + +IVR++G C E LV E G L K++ +R + + + ++ V+
Sbjct: 69 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 121
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV-SLTAARGTA 303
G++YL + +H D+ N+LL KISDFGL+K D + + T +
Sbjct: 122 MGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPV 178
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLE 333
+ APE N+ + S KSDV+S+G+++ E
Sbjct: 179 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 206
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH G
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH-GIG-- 124
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 185 AE-PVDVWSCGIVLTAMLA 202
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 127
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R++H DIKP N+LL + KI+DFG + C S T GT Y+ PE+
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSS--RRTTLSGTLDYLPPEMIEGRM 183
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 184 HDE--KVDLWSLGVLCYEFL 201
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 34/213 (15%)
Query: 141 LGQGGYGSVF------RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLL 194
LG+GG+G VF GKL+ + K L+ KG Q + E + ++H IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY-QGAMVEKKILAKVHSRFIVSLA 251
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARGVEYLHQ 252
T LV M G + I+ N P +++ + I + + G+E+LHQ
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIY---NVDEDNP-GFQEPRAIFYTAQIVSGLEHLHQ 307
Query: 253 GCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR-------GTAGY 305
+ I++ D+KP N+LLD + +ISD GLA V L A + GT G+
Sbjct: 308 ---RNIIYRDLKPENVLLDDDGNVRISDLGLA---------VELKAGQTKTKGYAGTPGF 355
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
+APEL E + D ++ G+ L EM+ R
Sbjct: 356 MAPELLLGE--EYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 34/213 (15%)
Query: 141 LGQGGYGSVF------RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLL 194
LG+GG+G VF GKL+ + K L+ KG Q + E + ++H IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY-QGAMVEKKILAKVHSRFIVSLA 251
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARGVEYLHQ 252
T LV M G + I+ N P +++ + I + + G+E+LHQ
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIY---NVDEDNP-GFQEPRAIFYTAQIVSGLEHLHQ 307
Query: 253 GCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR-------GTAGY 305
+ I++ D+KP N+LLD + +ISD GLA V L A + GT G+
Sbjct: 308 ---RNIIYRDLKPENVLLDDDGNVRISDLGLA---------VELKAGQTKTKGYAGTPGF 355
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
+APEL E + D ++ G+ L EM+ R
Sbjct: 356 MAPELLLGE--EYDFSVDYFALGVTLYEMIAAR 386
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH G
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH-GIG-- 124
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 185 AE-PVDVWSCGIVLTAMLA 202
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 34/213 (15%)
Query: 141 LGQGGYGSVF------RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLL 194
LG+GG+G VF GKL+ + K L+ KG Q + E + ++H IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY-QGAMVEKKILAKVHSRFIVSLA 251
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG--VARGVEYLHQ 252
T LV M G + I+ N P +++ + I + + G+E+LHQ
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIY---NVDEDNP-GFQEPRAIFYTAQIVSGLEHLHQ 307
Query: 253 GCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR-------GTAGY 305
+ I++ D+KP N+LLD + +ISD GLA V L A + GT G+
Sbjct: 308 ---RNIIYRDLKPENVLLDDDGNVRISDLGLA---------VELKAGQTKTKGYAGTPGF 355
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
+APEL E + D ++ G+ L EM+ R
Sbjct: 356 MAPELLLGE--EYDFSVDYFALGVTLYEMIAAR 386
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY------ITELANALSYCH---S 130
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R++H DIKP N+LL N + KI+DFG S T GT Y+ PE+
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 187 HDE--KVDLWSLGVLCYEFL 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 86/199 (43%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E+ ++H ++V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH---GIG 125
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 186 AE-PVDVWSCGIVLTAMLA 203
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 22/198 (11%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQE---FINEVATIGRIHHFHIVRLLGF 196
LG+G +G V + K AVK++ ++ + EV + ++ H +I++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
+ + +V E G L I + S H +I V G+ Y+H+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA------ARIIKQVFSGITYMHK---H 140
Query: 257 RILHFDIKPHNILLDHNFQP---KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
I+H D+KP NILL+ + KI DFGL+ ++ + GTA YIAPE+
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLRG 197
Query: 314 NFGEVSYKSDVYSYGMML 331
+ E K DV+S G++L
Sbjct: 198 TYDE---KCDVWSAGVIL 212
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 140 RLGQGGYGSVFRGKLFNGIPVAVKMLEHLK---GNGQEFINEVATIGRIHHFHIVRLLGF 196
++G+G YG V++ + G A+K + K G I E++ + + H +IV+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
R LV+E + + L+K + L K + G+ Y H ++
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLL-----DVCEGGLESVTAKSFLLQLLNGIAYCH---DR 119
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
R+LH D+KP N+L++ + KI+DFGLA+ I + T T Y AP++ G
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEVVTLWYRAPDVL---MG 174
Query: 317 EVSYKS--DVYSYGMMLLEMV 335
Y + D++S G + EMV
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMV 195
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 112/228 (49%), Gaps = 23/228 (10%)
Query: 111 EKFLEDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK 169
E+ LE R + + + KK ++F+ ++GQG G+V+ + G VA++ + +
Sbjct: 4 EEILEKLRII----VSVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQ 58
Query: 170 GNGQEFI-NEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSH 228
+E I NE+ + + +IV L G +V E++ GSL T+ +
Sbjct: 59 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL-------TDVVTE 111
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
+ ++ + + +E+LH + +++H +IK NILL + K++DFG +
Sbjct: 112 TCMDEGQIAAVCRECLQALEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQIT 168
Query: 289 KDISIVSLTAARGTAGYIAPELFSRN-FGEVSYKSDVYSYGMMLLEMV 335
+ S S GT ++APE+ +R +G K D++S G+M +EM+
Sbjct: 169 PEQSKRSTMV--GTPYWMAPEVVTRKAYGP---KVDIWSLGIMAIEMI 211
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 140 RLGQGGYGSVFRGKLFNGIPVAVKMLEHLK---GNGQEFINEVATIGRIHHFHIVRLLGF 196
++G+G YG V++ + G A+K + K G I E++ + + H +IV+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
R LV+E + + L+K + L K + G+ Y H ++
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLL-----DVCEGGLESVTAKSFLLQLLNGIAYCH---DR 119
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
R+LH D+KP N+L++ + KI+DFGLA+ I + T T Y AP++ G
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEVVTLWYRAPDVL---MG 174
Query: 317 EVSYKS--DVYSYGMMLLEMV 335
Y + D++S G + EMV
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMV 195
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 127 YKELKKITSKFKHRLGQGGYGSV-FRGKLFNGIPVAVKMLEH--LKGNGQEFINEVATIG 183
Y EL K + +G GG+ V + G VA+K+++ L + E+ +
Sbjct: 5 YDELLKYY-ELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALK 63
Query: 184 RIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGV 243
+ H HI +L + +V E+ P G L +I S+ LS E+ + + +
Sbjct: 64 NLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR------LSEEETRVVFRQI 117
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI--SIVSLTAARG 301
V Y+H +Q H D+KP N+L D + K+ DFG LC+K L G
Sbjct: 118 VSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFG---LCAKPKGNKDYHLQTCCG 171
Query: 302 TAGYIAPELFSRNFGEVSYKSDVYSYGMML 331
+ Y APEL + + ++DV+S G++L
Sbjct: 172 SLAYAAPELI-QGKSYLGSEADVWSMGILL 200
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G + K + + R ++ +A + Y H +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY------ITELANALSYCH---S 131
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R++H DIKP N+LL + KI+DFG S T GT Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 188 HDE--KVDLWSLGVLCYEFL 205
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH G
Sbjct: 73 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH-GIG-- 123
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 184 AE-PVDVWSCGIVLTAMLA 201
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 140 RLGQGGYGSVFRGKLFNGIPVAVKMLEHLK---GNGQEFINEVATIGRIHHFHIVRLLGF 196
++G+G YG V++ + G A+K + K G I E++ + + H +IV+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
R LV+E + + L+K + L K + G+ Y H ++
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLL-----DVCEGGLESVTAKSFLLQLLNGIAYCH---DR 119
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
R+LH D+KP N+L++ + KI+DFGLA+ I + T T Y AP++ G
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEIVTLWYRAPDVL---MG 174
Query: 317 EVSYKS--DVYSYGMMLLEMV 335
Y + D++S G + EMV
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMV 195
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH G
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH-GIG-- 124
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 185 AE-PVDVWSCGIVLTAMLA 202
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH G
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH-GIG-- 125
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 186 AE-PVDVWSCGIVLTAMLA 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH G
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH-GIG-- 124
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 185 AE-PVDVWSCGIVLTAMLA 202
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Query: 230 PLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSK 289
P++ E L +F VARG+E+L +++ +H D+ NILL N KI DFGLA+ K
Sbjct: 195 PITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 290 DISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
+ V R ++APE +F + + S KSDV+SYG++L E+
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIY---STKSDVWSYGVLLWEI 294
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 136 KFKHRLGQGGYGSVFRGKLFNGI-------PVAVKMLEH--LKGNGQEFINEVATIGRI- 185
K LG+G +G V + F GI VAVKML+ + + E+ + I
Sbjct: 30 KLGKSLGRGAFGKVVQASAF-GIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIG 88
Query: 186 HHFHIVRLLGFCS-EGTRRALVYEFMPNGSLEKFIFSKTN 224
HH ++V LLG C+ +G ++ E+ G+L ++ SK +
Sbjct: 89 HHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRD 128
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY------ITELANALSYCH---S 130
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR----GTAGYIAPELF 311
+R++H DIKP N+LL N + KI+DFG S+ + ++ R GT Y+ PE+
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGW--------SVHAPSSRRDTLCGTLDYLPPEMI 182
Query: 312 SRNFGEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 183 EGRMHDE--KVDLWSLGVLCYEFL 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH G
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH-GIG-- 124
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 185 AE-PVDVWSCGIVLTAMLA 202
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQEFI----NEVATIGRIHHFHIVRLLG 195
LG G +G V G+ G VAVK+L K + + E+ + H HI++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
S T +V E++ G L +I H + + +++ + V+Y H+
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYI------CKHGRVEEMEARRLFQQILSAVDYCHR--- 129
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
++H D+KP N+LLD + KI+DFGL+ + S L + G+ Y APE+ S
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---EFLRTSCGSPNYAAPEVISGRL 186
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ D++S G++L ++
Sbjct: 187 -YAGPEVDIWSCGVILYALL 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH G
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH-GIG-- 124
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 185 AE-PVDVWSCGIVLTAMLA 202
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH---GIG 124
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 185 AE-PVDVWSCGIVLTAMLA 202
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH G
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH-GIG-- 125
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 186 AE-PVDVWSCGIVLTAMLA 203
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 113/224 (50%), Gaps = 28/224 (12%)
Query: 127 YKELKKITSKFKHRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNGQEFI-NEVATIGR 184
++++ K+TS+ LG+G Y V L NG AVK++E G+ + + EV T+ +
Sbjct: 10 FEDMYKLTSEL---LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQ 66
Query: 185 IH-HFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGV 243
+ +I+ L+ F + TR LV+E + GS+ I K + R S ++ V
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHI-QKQKHFNEREAS-----RVVRDV 120
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILLD--HNFQP-KISDFGLA---KL---CSKDISIV 294
A +++LH + I H D+KP NIL + P KI DF L KL C+ I+
Sbjct: 121 AAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTP-ITTP 176
Query: 295 SLTAARGTAGYIAPELFSRNFGEVSY---KSDVYSYGMMLLEMV 335
LT G+A Y+APE+ + ++ + D++S G++L M+
Sbjct: 177 ELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIML 220
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH G
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH-GIG-- 124
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 185 AE-PVDVWSCGIVLTAMLA 202
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKML---EHLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
+G+G YG V N + VA+K + EH + Q + E+ + R H +I+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYXQRTLREIKILLRFRHENIIGINDI 93
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA--- 147
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNF 315
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ +
Sbjct: 148 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 316 GEVSYKSDVYSYGMMLLEMVGCR 338
G + D++S G +L EM+ R
Sbjct: 208 G-YTKSIDIWSVGCILAEMLSNR 229
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH---GIG 125
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 186 AE-PVDVWSCGIVLTAMLA 203
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH---GIG 125
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 186 AE-PVDVWSCGIVLTAMLA 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH---GIG 125
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 186 AE-PVDVWSCGIVLTAMLA 203
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 148
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 209 -YTKSIDIWSVGCILAEMLSNR 229
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 28/204 (13%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G + K + + R ++ +A + Y H +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY------ITELANALSYCH---S 131
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR----GTAGYIAPELF 311
+R++H DIKP N+LL + KI+DFG S+ + ++ R GT Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRXXLXGTLDYLPPEMI 183
Query: 312 SRNFGEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 184 EGRMHDE--KVDLWSLGVLCYEFL 205
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 34/206 (16%)
Query: 140 RLGQGGYGSVF--RGKLFNGIPVAVKMLEHLK---GNGQEFINEVATIGRIHHFHIVRLL 194
+LG G YG V R K+ + + A+K++ + + + EVA + + H +I++L
Sbjct: 44 KLGSGAYGEVLLCRDKVTH-VERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 195 GFCSEGTRRALVYEFMPNGSL-----EKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEY 249
F + LV E G L + F++ +++ I V GV Y
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV-----------IIKQVLSGVTY 151
Query: 250 LHQGCNQRILHFDIKPHNILLDHNFQP---KISDFGLAKLCSKDISIVSLTAARGTAGYI 306
LH+ I+H D+KP N+LL+ + KI DFGL+ + + GTA YI
Sbjct: 152 LHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ---KKMKERLGTAYYI 205
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLL 332
APE+ + + E K DV+S G++L
Sbjct: 206 APEVLRKKYDE---KCDVWSIGVILF 228
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQEFI----NEVATIGRIHHFHIVRLLG 195
LG G +G V G+ G VAVK+L K + + E+ + H HI++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
S T +V E++ G L +I H + + +++ + V+Y H+
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYI------CKHGRVEEMEARRLFQQILSAVDYCHR--- 129
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
++H D+KP N+LLD + KI+DFGL+ + S L + G+ Y APE+ S
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---EFLRDSCGSPNYAAPEVISGRL 186
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ D++S G++L ++
Sbjct: 187 -YAGPEVDIWSCGVILYALL 205
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNG------QEFINEVATIGR 184
+K+ + LG G +G+V +G V ++ LK E + E + +
Sbjct: 368 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 427
Query: 185 IHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
+ + +IVR++G C E LV E G L K++ +R + + + ++ V+
Sbjct: 428 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 480
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV-SLTAARGTA 303
G++YL + +H D+ N+LL KISDFGL+K D + + T +
Sbjct: 481 MGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 537
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLE 333
+ APE N+ + S KSDV+S+G+++ E
Sbjct: 538 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 565
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH G
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH-GIG-- 124
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 185 AE-PVDVWSCGIVLTAMLA 202
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE-HLKGNGQEFINEVATIGRIHHFHIVRLLGFC 197
LG G +G V++ + + A K+++ + ++++ E+ + H +IV+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
++ EF G+++ + RPL+ +++ + + YLH + +
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLE-----LERPLTESQIQVVCKQTLDALNYLH---DNK 155
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF---SRN 314
I+H D+K NIL + K++DFG++ ++ +I + GT ++APE+ +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTR--TIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 315 FGEVSYKSDVYSYGMMLLEM 334
YK+DV+S G+ L+EM
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 23/179 (12%)
Query: 158 IPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEK 217
I V +K +EH +E + + H I+R+ G + + ++ +++ G L
Sbjct: 43 IVVRLKQVEHTN-------DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL-- 93
Query: 218 FIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPK 277
FS S P K A V +EYLH ++ I++ D+KP NILLD N K
Sbjct: 94 --FSLLRKSQRFPNPVAKF--YAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIK 146
Query: 278 ISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
I+DFG AK D++ GT YIAPE+ S + D +S+G+++ EM+
Sbjct: 147 ITDFGFAKYVP-DVTYXLC----GTPDYIAPEVVSTK--PYNKSIDWWSFGILIYEMLA 198
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 144
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 205 -YTKSIDIWSVGCILAEMLSNR 225
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G YG V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH G
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH-GIG-- 125
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 186 AE-PVDVWSCGIVLTAMLA 203
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 131 KKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNG------QEFINEVATIGR 184
+K+ + LG G +G+V +G V ++ LK E + E + +
Sbjct: 367 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 426
Query: 185 IHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
+ + +IVR++G C E LV E G L K++ +R + + + ++ V+
Sbjct: 427 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVS 479
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV-SLTAARGTA 303
G++YL + +H D+ N+LL KISDFGL+K D + + T +
Sbjct: 480 MGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 536
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLE 333
+ APE N+ + S KSDV+S+G+++ E
Sbjct: 537 KWYAPECI--NYYKFSSKSDVWSFGVLMWE 564
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 142
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 203 -YTKSIDIWSVGCILAEMLSNR 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 142
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 203 -YTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 149
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 209
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 210 -YTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 150
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 210
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 211 -YTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 141
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 201
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 202 -YTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 148
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 209 -YTKSIDIWSVGCILAEMLSNR 229
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 141 LGQGGYGSVFRGKLFN----GIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLL 194
+G+G +G V +G + + VA+K ++ + ++F+ E T+ + H HIV+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
G +E ++ E G L F+ + S L L A+ ++ + YL
Sbjct: 78 GVITENP-VWIIMELCTLGELRSFLQVRKFS-----LDLASLILYAYQLSTALAYLE--- 128
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
++R +H DI N+L+ K+ DFGL++ +D + + + ++APE S N
Sbjct: 129 SKRFVHRDIAARNVLVSATDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPE--SIN 185
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
F + SDV+ +G+ + E++
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 144
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 205 -YTKSIDIWSVGCILAEMLSNR 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 144
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 205 -YTKSIDIWSVGCILAEMLSNR 225
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 86/166 (51%), Gaps = 15/166 (9%)
Query: 169 KGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRAL--VYEFMPNGSLEKFIFSKTNSS 226
+G ++ E+A + ++ H ++V+L+ + L V+E + G +
Sbjct: 77 RGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV-------MEVP 129
Query: 227 SHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKL 286
+ +PLS ++ + + +G+EYLH Q+I+H DIKP N+L+ + KI+DFG++
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 287 CSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKS-DVYSYGMML 331
+++S T GT ++APE S S K+ DV++ G+ L
Sbjct: 187 FKGSDALLSNTV--GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 146
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 207 -YTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 144
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 205 -YTKSIDIWSVGCILAEMLSNR 225
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 129
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R++H DIKP N+LL + KI+DFG S T GT Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 186 HDE--KVDLWSLGVLCYEFL 203
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 141 LGQGGYGSVFRGKLFNG----IPVAVKMLEH---LKGNGQEFINEVATIGRIHHFHIVRL 193
LG+G +GSV +L + VAVKML+ + +EF+ E A + H H+ +L
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 194 LGFCSEGTRRA------LVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
+G + ++ FM +G L F+ + + L + L + +A G+
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIA 307
EYL ++ +H D+ N +L + ++DFGL++ A++ ++A
Sbjct: 151 EYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 308 PELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E + N V SDV+++G+ + E++
Sbjct: 208 LESLADNLYTV--HSDVWAFGVTMWEIM 233
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 152
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 212
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 213 -YTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 144
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 205 -YTKSIDIWSVGCILAEMLSNR 225
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 20/227 (8%)
Query: 115 EDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFN----GIPVAVKMLEHLKG 170
ED T+ TR E+++ + +G+G +G V +G + + VA+K ++
Sbjct: 374 EDTYTMPSTRDY--EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS 431
Query: 171 NG--QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSH 228
+ ++F+ E T+ + H HIV+L+G +E ++ E G L F+ + S
Sbjct: 432 DSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFS--- 487
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
L L A+ ++ + YL ++R +H DI N+L+ K+ DFGL++
Sbjct: 488 --LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM- 541
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+D + + + ++APE S NF + SDV+ +G+ + E++
Sbjct: 542 EDSTYYKASKGKLPIKWMAPE--SINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 143
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R++H DIKP N+LL + KI+DFG S T GT Y+ PE+
Sbjct: 144 KRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRM 199
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 200 HDE--KVDLWSLGVLCYEFL 217
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 131
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R++H DIKP N+LL + KI+DFG S T GT Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 188 HDE--KVDLWSLGVLCYEFL 205
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE-HLKGNGQEFINEVATIGRIHHFHIVRLLGFC 197
LG G +G V++ + + A K+++ + ++++ E+ + H +IV+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
++ EF G+++ + RPL+ +++ + + YLH + +
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLE-----LERPLTESQIQVVCKQTLDALNYLH---DNK 155
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF---SRN 314
I+H D+K NIL + K++DFG++ ++ I + GT ++APE+ +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQ--RRDSFIGTPYWMAPEVVMCETSK 213
Query: 315 FGEVSYKSDVYSYGMMLLEM 334
YK+DV+S G+ L+EM
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 164
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 225 -YTKSIDIWSVGCILAEMLSNR 245
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 152
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R++H DIKP N+LL + KI+DFG S T GT Y+ PE+
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRM 208
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 209 HDE--KVDLWSLGVLCYEFL 226
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 127
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR----GTAGYIAPELF 311
+R++H DIKP N+LL + KI+DFG S+ + ++ R GT Y+ PE+
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRDTLCGTLDYLPPEMI 179
Query: 312 SRNFGEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 180 EGRMHDE--KVDLWSLGVLCYEFL 201
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 127
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR----GTAGYIAPELF 311
+R++H DIKP N+LL + KI+DFG S+ + ++ R GT Y+ PE+
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMI 179
Query: 312 SRNFGEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 180 EGRMHDE--KVDLWSLGVLCYEFL 201
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 129
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R++H DIKP N+LL + KI+DFG S T GT Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 186 HDE--KVDLWSLGVLCYEFL 203
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 126
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R++H DIKP N+LL + KI+DFG S T GT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRM 182
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 183 HDE--KVDLWSLGVLCYEFL 200
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA++ + + Q + E+ + R H +I+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 148
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 209 -YTKSIDIWSVGCILAEMLSNR 229
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 128
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR----GTAGYIAPELF 311
+R++H DIKP N+LL + KI+DFG S+ + ++ R GT Y+ PE+
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRXXLCGTLDYLPPEMI 180
Query: 312 SRNFGEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 181 EGRMHDE--KVDLWSLGVLCYEFL 202
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 139 HRLGQGGYGSVFR-GKLFNGIPVAVKMLEH---LKGNGQEFINEVATIGRIHHFHIVRLL 194
+ +G G YG + + +G + K L++ + Q ++EV + + H +IVR
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 195 GFCSEGTRRAL--VYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
+ T L V E+ G L I T + L E + ++ + ++ H+
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY--LDEEFVLRVMTQLTLALKECHR 129
Query: 253 GCN--QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPEL 310
+ +LH D+KP N+ LD K+ DFGLA++ + D S A GT Y++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK--AFVGTPYYMSPEQ 187
Query: 311 FSRNFGEVSY--KSDVYSYGMMLLEM 334
+R +SY KSD++S G +L E+
Sbjct: 188 MNR----MSYNEKSDIWSLGCLLYEL 209
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 131
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR----GTAGYIAPELF 311
+R++H DIKP N+LL + KI+DFG S+ + ++ R GT Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMI 183
Query: 312 SRNFGEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 184 EGRMHDE--KVDLWSLGVLCYEFL 205
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K H LS + + + + RG++Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLY-KLLKCQH--LSNDHICYFLYQILRGLKYIHSA---N 148
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 209 -YTKSIDIWSVGCILAEMLSNR 229
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 126
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR----GTAGYIAPELF 311
+R++H DIKP N+LL + KI+DFG S+ + ++ R GT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMI 178
Query: 312 SRNFGEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 179 EGRMHDE--KVDLWSLGVLCYEFL 200
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 126
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR----GTAGYIAPELF 311
+R++H DIKP N+LL + KI+DFG S+ + ++ R GT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMI 178
Query: 312 SRNFGEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 179 EGRMHDE--KVDLWSLGVLCYEFL 200
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 125
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R++H DIKP N+LL + KI+DFG S T GT Y+ PE+
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRM 181
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 182 HDE--KVDLWSLGVLCYEFL 199
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 126
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR----GTAGYIAPELF 311
+R++H DIKP N+LL + KI+DFG S+ + ++ R GT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTELCGTLDYLPPEMI 178
Query: 312 SRNFGEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 179 EGRMHDE--KVDLWSLGVLCYEFL 200
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 24/218 (11%)
Query: 142 GQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGT 201
+G +G V++ +L N VAVK+ + E+ + + H ++++ + G+
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGS 82
Query: 202 RRA----LVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ----- 252
L+ F GSL ++ K N ++W +L +A ++RG+ YLH+
Sbjct: 83 NLEVELWLITAFHDKGSLTDYL--KGNI-----ITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 253 ---GCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE 309
G I H D K N+LL + ++DFGLA GT Y+APE
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
Query: 310 LF--SRNFGEVSY-KSDVYSYGMMLLEMVG-CRKNKDP 343
+ + NF ++ + D+Y+ G++L E+V C+ P
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGP 233
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 152
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR----GTAGYIAPELF 311
+R++H DIKP N+LL + KI+DFG S+ + ++ R GT Y+ PE+
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRDDLCGTLDYLPPEMI 204
Query: 312 SRNFGEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 205 EGRMHDE--KVDLWSLGVLCYEFL 226
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 130
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R++H DIKP N+LL + KI+DFG S T GT Y+ PE+
Sbjct: 131 KRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 187 HDE--KVDLWSLGVLCYEFL 204
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 137 FKHRLGQGGYGSV-FRGKLFNGIPVAVK-MLEHLKGNGQEFINEVATIGRIHHFHIVRLL 194
F +LG+GG+ V L +G A+K +L H + + +E E +H +I+RL+
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 195 GFC--SEGTRRA--LVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYL 250
+C G + L+ F G+L I + + L+ +++ + G+ RG+E +
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF--LTEDQILWLLLGICRGLEAI 150
Query: 251 HQGCNQRILHFDIKPHNILLDHNFQPKISDFG-LAKLC------SKDISIVSLTAARGTA 303
H + H D+KP NILL QP + D G + + C + +++ A R T
Sbjct: 151 HA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 304 GYIAPELFS-RNFGEVSYKSDVYSYGMMLLEMV 335
Y APELFS ++ + ++DV+S G +L M+
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM 240
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 129
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R++H DIKP N+LL + KI+DFG S A GT Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRM 185
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 186 HDE--KVDLWSLGVLCYEFL 203
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVKMLE-HLKGNGQEFINEVATIGRIHHFHIVRLLGFC 197
LG G +G V++ + + A K+++ + ++++ E+ + H +IV+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
++ EF G+++ + RPL+ +++ + + YLH + +
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLE-----LERPLTESQIQVVCKQTLDALNYLH---DNK 155
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF---SRN 314
I+H D+K NIL + K++DFG++ ++ I GT ++APE+ +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQ--RRDXFIGTPYWMAPEVVMCETSK 213
Query: 315 FGEVSYKSDVYSYGMMLLEM 334
YK+DV+S G+ L+EM
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 234 EKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI 293
E +K + ++YL NQRI+H D+KP NILLD + I+DF +A + ++ I
Sbjct: 115 ETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI 171
Query: 294 VSLTAARGTAGYIAPELFSRNFGE-VSYKSDVYSYGMMLLEMVGCRK 339
++ GT Y+APE+FS G S+ D +S G+ E++ R+
Sbjct: 172 TTMA---GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 23/197 (11%)
Query: 141 LGQGGYGSVFR-GKLFNGIPVAVKMLEHLKG--NGQEFINEVATIGRIHHFHIVRLLGFC 197
LG G +G V + + G+ +A K+++ +G + +E NE++ + ++ H ++++L
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIK-TRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAF--GVARGVEYLHQGCN 255
LV E++ G L F + S+ + +L I F + G+ ++HQ
Sbjct: 156 ESKNDIVLVMEYVDGGEL----FDRIIDESY---NLTELDTILFMKQICEGIRHMHQ--- 205
Query: 256 QRILHFDIKPHNILLDHNF--QPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
ILH D+KP NIL + Q KI DFGLA+ L GT ++APE+ +
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR---EKLKVNFGTPEFLAPEVVNY 262
Query: 314 NFGEVSYKSDVYSYGMM 330
+F VS+ +D++S G++
Sbjct: 263 DF--VSFPTDMWSVGVI 277
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 126
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R++H DIKP N+LL + KI+DFG S A GT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 183 HDE--KVDLWSLGVLCYEFL 200
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 31/213 (14%)
Query: 141 LGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSE- 199
+G+G YG V+RG L++G VAVK+ E+ + H +I LGF +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNI---LGFIASD 71
Query: 200 ------GTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLH-- 251
T+ L+ + +GSL F+ +T H L ++A A G+ +LH
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQT-LEPHLAL------RLAVSAACGLAHLHVE 124
Query: 252 ----QGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSK--DISIVSLTAARGTAGY 305
QG I H D K N+L+ N Q I+D GLA + S+ D + GT Y
Sbjct: 125 IFGTQG-KPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRY 183
Query: 306 IAPELFSRNFGEVSYKS----DVYSYGMMLLEM 334
+APE+ ++S D++++G++L E+
Sbjct: 184 MAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 129
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR----GTAGYIAPELF 311
+R++H DIKP N+LL + KI+DFG S+ + ++ R GT Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRXXLCGTLDYLPPEMI 181
Query: 312 SRNFGEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 182 EGRMHDE--KVDLWSLGVLCYEFL 203
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 126
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R++H DIKP N+LL + KI+DFG S T GT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPPEMIEGRM 182
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 183 HDE--KVDLWSLGVLCYEFL 200
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 30/218 (13%)
Query: 134 TSKFKH--RLGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQEF------INEVATIGR 184
TS+++ +G G YG+V++ + +G VA+K + G G + EVA + R
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRR 67
Query: 185 IHHF---HIVRLLGFCSEG-----TRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKL 236
+ F ++VRL+ C+ + LV+E + + L ++ + + L E +
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL----DKAPPPGLPAETI 122
Query: 237 KKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSL 296
K + RG+++LH C I+H D+KP NIL+ K++DFGLA++ S + +L
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQM---AL 176
Query: 297 TAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
T T Y APE+ ++ + D++S G + EM
Sbjct: 177 TPVVVTLWYRAPEVLLQS--TYATPVDMWSVGCIFAEM 212
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 148
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D L T Y APE+ + G
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 208
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 209 -YTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 149
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D L T Y APE+ + G
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 209
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 210 -YTKSIDIWSVGCILAEMLSNR 230
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 40/209 (19%)
Query: 137 FKHRLGQGGYGSVF------RGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGRIHHFH 189
F LG G + VF GKLF A+K ++ NE+A + +I H +
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLF-----ALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67
Query: 190 IVRLLGFCSEGTRRALVYEFMPNGS-----LEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
IV L T LV + + G LE+ ++++ ++S + V
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-----------VIQQVL 116
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILL---DHNFQPKISDFGLAKLCSKDISIVSLTAARG 301
V+YLH+ I+H D+KP N+L + N + I+DFGL+K+ I ++ A G
Sbjct: 117 SAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI----MSTACG 169
Query: 302 TAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
T GY+APE+ ++ S D +S G++
Sbjct: 170 TPGYVAPEVLAQK--PYSKAVDCWSIGVI 196
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 126
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR----GTAGYIAPELF 311
+R++H DIKP N+LL + KI+DFG S+ + ++ R GT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRXXLCGTLDYLPPEMI 178
Query: 312 SRNFGEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 179 EGRMHDE--KVDLWSLGVLCYEFL 200
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 187 HFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
H HI+ L+ + LV++ M G L ++ K LS ++ + I +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA------LSEKETRSIMRSLLEA 212
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYI 306
V +LH I+H D+KP NILLD N Q ++SDFG + + L GT GY+
Sbjct: 213 VSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELC---GTPGYL 266
Query: 307 APELFSRNFGEV----SYKSDVYSYGMMLLEMVG 336
APE+ + E + D+++ G++L ++
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLA 300
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 123
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R++H DIKP N+LL + KI+DFG S T GT Y+ PE+
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRM 179
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 180 HDE--KVDLWSLGVLCYEFL 197
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 129
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR----GTAGYIAPELF 311
+R++H DIKP N+LL + KI+DFG S+ + ++ R GT Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRDDLCGTLDYLPPEMI 181
Query: 312 SRNFGEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 182 EGRMHDE--KVDLWSLGVLCYEFL 203
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 22/201 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 131
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS-RN 314
+R++H DIKP N+LL + KI+DFG S T GT Y+ PE R
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEXIEGRX 187
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
E K D++S G++ E +
Sbjct: 188 HDE---KVDLWSLGVLCYEFL 205
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 43/220 (19%)
Query: 140 RLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGR---IHHFHIVR---L 193
++G+G YG V+ GK + G VAVK+ F E A+ R I+ ++R +
Sbjct: 44 QIGKGRYGEVWMGK-WRGEKVAVKVF---------FTTEEASWFRETEIYQTVLMRHENI 93
Query: 194 LGFCSEG-------TRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
LGF + T+ L+ ++ NGSL ++ S T L + + K+A+ G
Sbjct: 94 LGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-------LDAKSMLKLAYSSVSG 146
Query: 247 VEYLH------QGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSL--TA 298
+ +LH QG I H D+K NIL+ N I+D GLA D + V +
Sbjct: 147 LCHLHTEIFSTQG-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNT 205
Query: 299 ARGTAGYIAPELFSRNFGEVSYKS----DVYSYGMMLLEM 334
GT Y+ PE+ + ++S D+YS+G++L E+
Sbjct: 206 RVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 117/247 (47%), Gaps = 26/247 (10%)
Query: 96 KSRESEKEKETQLKVEKFLEDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFR-GKL 154
K E E +++ + ++E FL + V ELK + LG G G VF+
Sbjct: 3 KLEELELDEQQRKRLEAFLTQKQKVG-------ELKDDDFEKISELGAGNGGVVFKVSHK 55
Query: 155 FNGIPVAVKM--LEHLKGNGQEFINEVATIGRIHHFHIVRLLG-FCSEGTRRALVYEFMP 211
+G+ +A K+ LE + I E+ + + +IV G F S+G ++ E M
Sbjct: 56 PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISICMEHMD 114
Query: 212 NGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD 271
GSL++ + K + + L K++ V +G+ YL + +I+H D+KP NIL++
Sbjct: 115 GGSLDQ-VLKKAGR-----IPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVN 166
Query: 272 HNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMML 331
+ K+ DFG++ ++ + GT Y++PE S +SD++S G+ L
Sbjct: 167 SRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSL 220
Query: 332 LEMVGCR 338
+EM R
Sbjct: 221 VEMAVGR 227
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 139 HRLGQGGYGSVFR-GKLFNGIPVAVKMLEH---LKGNGQEFINEVATIGRIHHFHIVRLL 194
+ +G G YG + + +G + K L++ + Q ++EV + + H +IVR
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 195 GFCSEGTRRAL--VYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
+ T L V E+ G L I T + L E + ++ + ++ H+
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY--LDEEFVLRVMTQLTLALKECHR 129
Query: 253 GCN--QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPEL 310
+ +LH D+KP N+ LD K+ DFGLA++ + D S GT Y++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV--GTPYYMSPEQ 187
Query: 311 FSRNFGEVSY--KSDVYSYGMMLLEM 334
+R +SY KSD++S G +L E+
Sbjct: 188 MNR----MSYNEKSDIWSLGCLLYEL 209
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEH----LKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G V K G AVK++ K + + + EV + ++ H +I++L
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
F + LV E G L I S+ + S +I V G+ Y+H+
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEIISR------KRFSEVDAARIIRQVLSGITYMHKN-- 145
Query: 256 QRILHFDIKPHNILLDHNFQP---KISDFGLAK--LCSKDISIVSLTAARGTAGYIAPEL 310
+I+H D+KP N+LL+ + +I DFGL+ SK + GTA YIAPE+
Sbjct: 146 -KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-----KMKDKIGTAYYIAPEV 199
Query: 311 FSRNFGEVSYKSDVYSYGMML-LEMVGC 337
+ E K DV+S G++L + + GC
Sbjct: 200 LHGTYDE---KCDVWSTGVILYILLSGC 224
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
+E EV+ + ++ H +++ L T L+ E + G L F+ K + S S
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF---QPKISDFGLAKLCS 288
+ K + GV YLH ++I HFD+KP NI LLD N K+ DFGLA
Sbjct: 120 FIK------QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
+ ++ GT ++APE+ N+ + ++D++S G++
Sbjct: 171 DGVEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
+E EV+ + ++ H +++ L T L+ E + G L F+ K + S S
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF---QPKISDFGLAKLCS 288
+ K + GV YLH ++I HFD+KP NI LLD N K+ DFGLA
Sbjct: 120 FIK------QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
+ ++ GT ++APE+ N+ + ++D++S G++
Sbjct: 171 DGVEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 122 PTRYTYKELKKITSKFKHRLGQGGYGSVFRG-KLFNGIPVAVKM--LEHLK-GNGQEFIN 177
P+ + ++IT +LG+G YG V++ VA+K LEH + G I
Sbjct: 28 PSATSIDRYRRIT-----KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR 82
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
EV+ + + H +I+ L R L++E+ N L+K++ + +S +K
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPD------VSMRVIK 135
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILL---DHNFQP--KISDFGLAKLCSKDIS 292
+ + GV + H ++R LH D+KP N+LL D + P KI DFGLA+ I
Sbjct: 136 SFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG--IP 190
Query: 293 IVSLTAARGTAGYIAPELF--SRNFGEVSYKSDVYSYGMMLLEMV 335
I T T Y PE+ SR++ S D++S + EM+
Sbjct: 191 IRQFTHEIITLWYRPPEILLGSRHY---STSVDIWSIACIWAEML 232
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHIVRLLG 195
LG+G +G V G VA+K++ K + Q I E++ + + H HI++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+V E+ N L +I + +S ++ ++ + VEY H+
Sbjct: 82 VIKSKDEIIMVIEYAGN-ELFDYIVQRDK------MSEQEARRFFQQIISAVEYCHR--- 131
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+I+H D+KP N+LLD + KI+DFGL+ + + L + G+ Y APE+ S
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVISGKL 188
Query: 316 GEVSYKSDVYSYGMMLLEMVGCRK 339
+ DV+S G++L M+ CR+
Sbjct: 189 -YAGPEVDVWSCGVILYVML-CRR 210
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
+E EV+ + ++ H +++ L T L+ E + G L F+ K + S S
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF---QPKISDFGLAKLCS 288
+ K + GV YLH ++I HFD+KP NI LLD N K+ DFGLA
Sbjct: 120 FIK------QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
+ ++ GT ++APE+ N+ + ++D++S G++
Sbjct: 171 DGVEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
+E EV+ + ++ H +I+ L T L+ E + G L F+ K + S S
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF---QPKISDFGLAKLCS 288
+ K + GV YLH ++I HFD+KP NI LLD N K+ DFGLA
Sbjct: 120 FIK------QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
+ ++ GT ++APE+ N+ + ++D++S G++
Sbjct: 171 DGVEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
+E EV+ + ++ H +++ L T L+ E + G L F+ K + S S
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF---QPKISDFGLAKLCS 288
+ K + GV YLH ++I HFD+KP NI LLD N K+ DFGLA
Sbjct: 120 FIK------QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
+ ++ GT ++APE+ N+ + ++D++S G++
Sbjct: 171 DGVEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 128
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R++H DIKP N+LL + KI++FG S T GT Y+ PE+
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRM 184
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 185 HDE--KVDLWSLGVLCYEFL 202
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKG-NGQEFINEVATIGR-IHHFHIVRLLGFC 197
LG+G G V VAVK+++ + + E I + I + ++H ++V+ G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
EG + L E+ G L F + P ++ + GV YLH G
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP--DAQRFFHQLMAGVVYLH-GIG-- 124
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGE 317
I H DIKP N+LLD KISDFGLA + + L GT Y+APEL R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 318 VSYKSDVYSYGMMLLEMVG 336
DV+S G++L M+
Sbjct: 185 AE-PVDVWSCGIVLTAMLA 202
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEH----LKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G V K G AVK++ K + + + EV + ++ H +I++L
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
F + LV E G L I S+ + S +I V G+ Y+H+
Sbjct: 100 FFEDKGYFYLVGEVYTGGELFDEIISR------KRFSEVDAARIIRQVLSGITYMHKN-- 151
Query: 256 QRILHFDIKPHNILLDHNFQP---KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS 312
+I+H D+KP N+LL+ + +I DFGL+ + + GTA YIAPE+
Sbjct: 152 -KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---ASKKMKDKIGTAYYIAPEVLH 207
Query: 313 RNFGEVSYKSDVYSYGMML-LEMVGC 337
+ E K DV+S G++L + + GC
Sbjct: 208 GTYDE---KCDVWSTGVILYILLSGC 230
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
+E EV+ + ++ H +++ L T L+ E + G L F+ K + S S
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF---QPKISDFGLAKLCS 288
+ K + GV YLH ++I HFD+KP NI LLD N K+ DFGLA
Sbjct: 120 FIK------QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
+ ++ GT ++APE+ N+ + ++D++S G++
Sbjct: 171 DGVEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHIVRLLG 195
LG+G +G V G VA+K++ K + Q I E++ + + H HI++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+V E+ N L +I + +S ++ ++ + VEY H+
Sbjct: 81 VIKSKDEIIMVIEYAGN-ELFDYIVQRDK------MSEQEARRFFQQIISAVEYCHR--- 130
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+I+H D+KP N+LLD + KI+DFGL+ + + L + G+ Y APE+ S
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVISGKL 187
Query: 316 GEVSYKSDVYSYGMMLLEMVGCRK 339
+ DV+S G++L M+ CR+
Sbjct: 188 -YAGPEVDVWSCGVILYVML-CRR 209
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHIVRLLG 195
LG+G +G V G VA+K++ K + Q I E++ + + H HI++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+V E+ N L +I + +S ++ ++ + VEY H+
Sbjct: 76 VIKSKDEIIMVIEYAGN-ELFDYIVQRDK------MSEQEARRFFQQIISAVEYCHR--- 125
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+I+H D+KP N+LLD + KI+DFGL+ + + L + G+ Y APE+ S
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVISGKL 182
Query: 316 GEVSYKSDVYSYGMMLLEMVGCRK 339
+ DV+S G++L M+ CR+
Sbjct: 183 -YAGPEVDVWSCGVILYVML-CRR 204
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEH---LKGNGQEFIN-EVATIGRIHHFHIVRLLG 195
LG+G +G V G VA+K++ K + Q I E++ + + H HI++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+V E+ N L +I + +S ++ ++ + VEY H+
Sbjct: 72 VIKSKDEIIMVIEYAGN-ELFDYIVQRDK------MSEQEARRFFQQIISAVEYCHR--- 121
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+I+H D+KP N+LLD + KI+DFGL+ + + L + G+ Y APE+ S
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVISGKL 178
Query: 316 GEVSYKSDVYSYGMMLLEMVGCRK 339
+ DV+S G++L M+ CR+
Sbjct: 179 -YAGPEVDVWSCGVILYVML-CRR 200
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 19/200 (9%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNG---QEFINEVATIGRIHHFHIVRLLGF 196
+G+G + V + + G VA+K+++ + N Q+ EV + ++H +IV+L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
L+ E+ G + ++ + H + ++ + + V+Y HQ +
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVA------HGRMKEKEARSKFRQIVSAVQYCHQ---K 133
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI-VSLTAARGTAGYIAPELFSRNF 315
RI+H D+K N+LLD + KI+DFG S + ++ L A G Y APELF
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGF----SNEFTVGGKLDAFCGAPPYAAPELFQGKK 189
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ + DV+S G++L +V
Sbjct: 190 YD-GPEVDVWSLGVILYTLV 208
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEH----LKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G V K G AVK++ K + + + EV + ++ H +I++L
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
F + LV E G L I S+ + S +I V G+ Y+H+
Sbjct: 118 FFEDKGYFYLVGEVYTGGELFDEIISR------KRFSEVDAARIIRQVLSGITYMHK--- 168
Query: 256 QRILHFDIKPHNILLDHNFQP---KISDFGLAK--LCSKDISIVSLTAARGTAGYIAPEL 310
+I+H D+KP N+LL+ + +I DFGL+ SK + GTA YIAPE+
Sbjct: 169 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-----KMKDKIGTAYYIAPEV 223
Query: 311 FSRNFGEVSYKSDVYSYGMML-LEMVGC 337
+ E K DV+S G++L + + GC
Sbjct: 224 LHGTYDE---KCDVWSTGVILYILLSGC 248
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 24/204 (11%)
Query: 141 LGQGGYGSVFRGKLF----NGIPVAVKMLEHLKGNGQEFIN---EVATIGRIHHFHIVRL 193
LGQG +G VF + +G A+K+L+ ++ + E + ++H +V+L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 194 -LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
F +EG + L+ +F+ G L T S + E +K +A G+++LH
Sbjct: 96 HYAFQTEG-KLYLILDFLRGGDL------FTRLSKEVMFTEEDVKFYLAELALGLDHLH- 147
Query: 253 GCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDISIVSLTAARGTAGYIAPELF 311
+ I++ D+KP NILLD K++DFGL+K + S GT Y+APE+
Sbjct: 148 --SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC---GTVEYMAPEVV 202
Query: 312 SRNFGEVSYKSDVYSYGMMLLEMV 335
+R G S+ +D +SYG+++ EM+
Sbjct: 203 NRQ-GH-SHSADWWSYGVLMFEML 224
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEH----LKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G V K G AVK++ K + + + EV + ++ H +I++L
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
F + LV E G L I S+ + S +I V G+ Y+H+
Sbjct: 117 FFEDKGYFYLVGEVYTGGELFDEIISR------KRFSEVDAARIIRQVLSGITYMHKN-- 168
Query: 256 QRILHFDIKPHNILLDHNFQP---KISDFGLAK--LCSKDISIVSLTAARGTAGYIAPEL 310
+I+H D+KP N+LL+ + +I DFGL+ SK + GTA YIAPE+
Sbjct: 169 -KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-----KMKDKIGTAYYIAPEV 222
Query: 311 FSRNFGEVSYKSDVYSYGMML-LEMVGC 337
+ E K DV+S G++L + + GC
Sbjct: 223 LHGTYDE---KCDVWSTGVILYILLSGC 247
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V VA+K + + Q + E+ + R H +++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T A+ ++ +E ++ S LS + + + + RG++Y+H
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQ---LSNDHICYFLYQILRGLKYIHSA---N 164
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+L++ KI DFGLA++ + LT T Y APE+ + G
Sbjct: 165 VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKG 224
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 225 -YTKSIDIWSVGCILAEMLSNR 245
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 27/213 (12%)
Query: 141 LGQGGYGSVFRGKL-FNGIPVAVKMLEH---LKGNGQEFINEVATIGRIHHFHIVRLLGF 196
+G G YG V + G VA+K + + + N + + E+ + H +I+ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI--- 118
Query: 197 CSEGTRRALVYEFMPNGSLEKF--IFSKTNSSSHR------PLSWEKLKKIAFGVARGVE 248
+ ++ +P G + + S H+ PL+ E ++ + + RG++
Sbjct: 119 ------KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLK 172
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDIS-IVSLTAARGTAGYI 306
Y+H +++H D+KP N+L++ N + KI DFG+A+ LC+ +T T Y
Sbjct: 173 YMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 229
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 339
APEL + E + D++S G + EM+ R+
Sbjct: 230 APELML-SLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + G+ F N E+ + ++ H +IVRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 139
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
+ I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI 194
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 195 ---FGATDYTSSIDVWSAGCVLAELL 217
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 27/213 (12%)
Query: 141 LGQGGYGSVFRGKL-FNGIPVAVKMLEH---LKGNGQEFINEVATIGRIHHFHIVRLLGF 196
+G G YG V + G VA+K + + + N + + E+ + H +I+ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI--- 119
Query: 197 CSEGTRRALVYEFMPNGSLEKF--IFSKTNSSSHR------PLSWEKLKKIAFGVARGVE 248
+ ++ +P G + + S H+ PL+ E ++ + + RG++
Sbjct: 120 ------KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLK 173
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDIS-IVSLTAARGTAGYI 306
Y+H +++H D+KP N+L++ N + KI DFG+A+ LC+ +T T Y
Sbjct: 174 YMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 230
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 339
APEL + E + D++S G + EM+ R+
Sbjct: 231 APELM-LSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K G + EV + H +I+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 129
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R++H DIKP N+LL + KI++FG S T GT Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 186 HDE--KVDLWSLGVLCYEFL 203
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + H +I+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 146
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 207 -YTKSIDIWSVGCILAEMLSNR 227
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + G+ F N E+ + ++ H +IVRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 139
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
+ I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI 194
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 195 ---FGATDYTSSIDVWSAGCVLAELL 217
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + G+ F N E+ + ++ H +IVRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P ++ + + + P+ + KL + + R + Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKL--YMYQLFRSLAYIH- 139
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
+ I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 140 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI 194
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 195 ---FGATDYTSSIDVWSAGCVLAELL 217
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + R H +I+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 198 S----EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
E + + + L K + ++ S+ H + + + RG++Y+H
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDH-------ICYFLYQILRGLKYIHSA 163
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFS 312
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+
Sbjct: 164 ---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 313 RNFGEVSYKSDVYSYGMMLLEMVGCR 338
+ G + D++S G +L EM+ R
Sbjct: 221 NSKG-YTKSIDIWSVGCILAEMLSNR 245
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFR-GKLFNGIPVAVKM--LEHLKGNGQEFINEVATIGRI 185
ELK + LG G G VF+ +G+ +A K+ LE + I E+ +
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 186 HHFHIVRLLG-FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
+ +IV G F S+G ++ E M GSL++ + K + + L K++ V
Sbjct: 65 NSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQ-VLKKAGR-----IPEQILGKVSIAVI 117
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAG 304
+G+ YL + +I+H D+KP NIL++ + K+ DFG++ +++ GT
Sbjct: 118 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA----NEFVGTRS 171
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKNKDP 343
Y++PE S +SD++S G+ L+EM R + P
Sbjct: 172 YMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGRYPRPP 208
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ +VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 84 SSGEKKDVVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI 194
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 195 ---FGATDYTSSIDVWSAGCVLAELL 217
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 20/208 (9%)
Query: 140 RLGQGGYGSVFRGKLFNGIP--VAVKMLE--HLKGNGQEFINEVATIGRIHHFHIVRLLG 195
R+G+G +G V++G + N VA+K+++ + ++ E+ + + +I R G
Sbjct: 26 RIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ T+ ++ E++ GS + PL + I + +G++YLH +
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLL-------KPGPLEETYIATILREILKGLDYLH---S 134
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+R +H DIK N+LL K++DFG+A + + + GT ++APE+ ++
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQS- 191
Query: 316 GEVSYKSDVYSYGMMLLEMV-GCRKNKD 342
+K+D++S G+ +E+ G N D
Sbjct: 192 -AYDFKADIWSLGITAIELAKGEPPNSD 218
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 11/202 (5%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLGFC 197
+G+G YG V N + VA+K + + Q + E+ + H +I+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
T + ++ +E ++ K + H LS + + + + RG++Y+H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLY-KLLKTQH--LSNDHICYFLYQILRGLKYIHSA---N 146
Query: 258 ILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNFG 316
+LH D+KP N+LL+ KI DFGLA++ D LT T Y APE+ + G
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 317 EVSYKSDVYSYGMMLLEMVGCR 338
+ D++S G +L EM+ R
Sbjct: 207 -YTKSIDIWSVGCILAEMLSNR 227
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 141 LGQGGYGSVFRGKLFN----GIPVAVKMLEH--LKGNGQEFINEVATIGRIHHFHIVRLL 194
LG+G +G V+ G N I VAVK + N ++F++E + + H HIV+L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
G E ++ E P G L ++ + N +S + L+ L + + + + YL
Sbjct: 76 GIIEEEP-TWIIMELYPYGELGHYL--ERNKNSLKVLT---LVLYSLQICKAMAYLE--- 126
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
+ +H DI NIL+ K+ DFGL++ +D + R +++PE S N
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPE--SIN 183
Query: 315 FGEVSYKSDVYSYGMMLLEMVG 336
F + SDV+ + + + E++
Sbjct: 184 FRRFTTASDVWMFAVCMWEILS 205
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 26/240 (10%)
Query: 103 EKETQLKVEKFLEDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFR-GKLFNGIPVA 161
+++ + ++E FL + V ELK + LG G G VF+ +G+ +A
Sbjct: 45 DEQQRKRLEAFLTQKQKVG-------ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA 97
Query: 162 VKM--LEHLKGNGQEFINEVATIGRIHHFHIVRLLG-FCSEGTRRALVYEFMPNGSLEKF 218
K+ LE + I E+ + + +IV G F S+G ++ E M GSL++
Sbjct: 98 RKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQ- 155
Query: 219 IFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKI 278
+ K + + L K++ V +G+ YL + +I+H D+KP NIL++ + K+
Sbjct: 156 VLKKAGR-----IPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKL 208
Query: 279 SDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
DFG++ ++ + GT Y++PE S +SD++S G+ L+EM R
Sbjct: 209 CDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 20/200 (10%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ K + V K G + EV + H +I+RL G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + TR L+ E+ P G++ + + + R ++ +A + Y H +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCH---S 126
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
++++H DIKP N+LL + KI+DFG S A GT Y+ PE+
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ K D++S G++ E +
Sbjct: 183 HDE--KVDLWSLGVLCYEFL 200
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 141 LGQGGYGSVFRGKLFN----GIPVAVKMLEH--LKGNGQEFINEVATIGRIHHFHIVRLL 194
LG+G +G V+ G N I VAVK + N ++F++E + + H HIV+L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
G E ++ E P G L ++ + N +S + L+ L + + + + YL
Sbjct: 92 GIIEEEP-TWIIMELYPYGELGHYL--ERNKNSLKVLT---LVLYSLQICKAMAYLE--- 142
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
+ +H DI NIL+ K+ DFGL++ +D + R +++PE S N
Sbjct: 143 SINCVHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPE--SIN 199
Query: 315 FGEVSYKSDVYSYGMMLLEMVG 336
F + SDV+ + + + E++
Sbjct: 200 FRRFTTASDVWMFAVCMWEILS 221
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 141 LGQGGYGSVFRGKLFN----GIPVAVKMLEH--LKGNGQEFINEVATIGRIHHFHIVRLL 194
LG+G +G V+ G N I VAVK + N ++F++E + + H HIV+L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
G E ++ E P G L ++ + N +S + L+ L + + + + YL
Sbjct: 80 GIIEEEP-TWIIMELYPYGELGHYL--ERNKNSLKVLT---LVLYSLQICKAMAYLE--- 130
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
+ +H DI NIL+ K+ DFGL++ +D + R +++PE S N
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPE--SIN 187
Query: 315 FGEVSYKSDVYSYGMMLLEMVG 336
F + SDV+ + + + E++
Sbjct: 188 FRRFTTASDVWMFAVCMWEILS 209
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 160 VAVKM--LEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEK 217
VA+K LE + + E + E+ + + HH +IV LV + + GS+
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 218 FIFSKTNSSSHRP--LSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQ 275
I H+ L + I V G+EYLH+ +H D+K NILL +
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 154
Query: 276 PKISDFGLAKLCSKDISIVSLTAAR---GTAGYIAPELFSRNFGEVSYKSDVYSYGMMLL 332
+I+DFG++ + I + GT ++APE+ + G +K+D++S+G+ +
Sbjct: 155 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAI 213
Query: 333 EM 334
E+
Sbjct: 214 EL 215
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 114 NNIVKXQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 160 VAVKM--LEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEK 217
VA+K LE + + E + E+ + + HH +IV LV + + GS+
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 218 FIFSKTNSSSHRP--LSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQ 275
I H+ L + I V G+EYLH+ +H D+K NILL +
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 159
Query: 276 PKISDFGLAKLCSKDISIVSLTAAR---GTAGYIAPELFSRNFGEVSYKSDVYSYGMMLL 332
+I+DFG++ + I + GT ++APE+ + G +K+D++S+G+ +
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAI 218
Query: 333 EM 334
E+
Sbjct: 219 EL 220
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
Query: 231 LSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD 290
L+ E L +F VA+G+E+L +++ +H D+ NILL KI DFGLA+ KD
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 291 ISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
V AR ++APE +F R + + +SDV+S+G++L E+
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 286
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINEV 179
E + K LG+G +G V F GI VAVKML+ + + ++E+
Sbjct: 16 EFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSEL 74
Query: 180 ATIGRI-HHFHIVRLLGFCSE-GTRRALVYEFMPNGSLEKFIFSKTN 224
+ I HH ++V LLG C++ G ++ EF G+L ++ SK N
Sbjct: 75 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN 121
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
Query: 231 LSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD 290
L+ E L +F VA+G+E+L +++ +H D+ NILL KI DFGLA+ KD
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 291 ISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
V AR ++APE +F R + + +SDV+S+G++L E+
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 288
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINEV 179
E + K LG+G +G V F GI VAVKML+ + + ++E+
Sbjct: 18 EFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSEL 76
Query: 180 ATIGRI-HHFHIVRLLGFCSE-GTRRALVYEFMPNGSLEKFIFSKTN 224
+ I HH ++V LLG C++ G ++ EF G+L ++ SK N
Sbjct: 77 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN 123
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 19/200 (9%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNG---QEFINEVATIGRIHHFHIVRLLGF 196
+G+G + V + + G VA+K+++ + N Q+ EV + ++H +IV+L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
L+ E+ G + ++ + H + ++ + + V+Y HQ +
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVA------HGRMKEKEARSKFRQIVSAVQYCHQ---K 130
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISI-VSLTAARGTAGYIAPELFSRNF 315
RI+H D+K N+LLD + KI+DFG S + ++ L G+ Y APELF
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGF----SNEFTVGGKLDTFCGSPPYAAPELFQGKK 186
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ + DV+S G++L +V
Sbjct: 187 YD-GPEVDVWSLGVILYTLV 205
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
Query: 231 LSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD 290
L+ E L +F VA+G+E+L +++ +H D+ NILL KI DFGLA+ KD
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 291 ISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
V AR ++APE +F R + + +SDV+S+G++L E+
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 295
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINEV 179
E + K LG+G +G V F GI VAVKML+ + + ++E+
Sbjct: 25 EFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSEL 83
Query: 180 ATIGRI-HHFHIVRLLGFCSE-GTRRALVYEFMPNGSLEKFIFSKTN 224
+ I HH ++V LLG C++ G ++ EF G+L ++ SK N
Sbjct: 84 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN 130
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
Query: 231 LSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD 290
L+ E L +F VA+G+E+L +++ +H D+ NILL KI DFGLA+ KD
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 291 ISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
V AR ++APE +F R + + +SDV+S+G++L E+
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI 293
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGKLFNGIP-------VAVKMLEHLKGNGQE--FINEV 179
E + K LG+G +G V F GI VAVKML+ + + ++E+
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSEL 81
Query: 180 ATIGRI-HHFHIVRLLGFCSE-GTRRALVYEFMPNGSLEKFIFSKTN 224
+ I HH ++V LLG C++ G ++ EF G+L ++ SK N
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN 128
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 45/217 (20%)
Query: 139 HRL-GQGGYGSVF------RGKLF-----NGIPVAVKMLEHLKGNGQEFINEVAT----- 181
HR+ G+GG+G V+ GK++ + + +K E L N + ++ V+T
Sbjct: 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 182 -IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIA 240
+ + FH L F + + M G L + S H S ++ A
Sbjct: 254 IVCMSYAFHTPDKLSF---------ILDLMNGGDLHYHL------SQHGVFSEADMRFYA 298
Query: 241 FGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR 300
+ G+E++H N+ +++ D+KP NILLD + +ISD GLA C D S A+
Sbjct: 299 AEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA--C--DFSKKKPHASV 351
Query: 301 GTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEMV 335
GT GY+APE+ + V+Y S D +S G ML +++
Sbjct: 352 GTHGYMAPEVLQKG---VAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 45/217 (20%)
Query: 139 HRL-GQGGYGSVF------RGKLF-----NGIPVAVKMLEHLKGNGQEFINEVAT----- 181
HR+ G+GG+G V+ GK++ + + +K E L N + ++ V+T
Sbjct: 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 182 -IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIA 240
+ + FH L F + + M G L + S H S ++ A
Sbjct: 254 IVCMSYAFHTPDKLSF---------ILDLMNGGDLHYHL------SQHGVFSEADMRFYA 298
Query: 241 FGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR 300
+ G+E++H N+ +++ D+KP NILLD + +ISD GLA C D S A+
Sbjct: 299 AEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA--C--DFSKKKPHASV 351
Query: 301 GTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEMV 335
GT GY+APE+ + V+Y S D +S G ML +++
Sbjct: 352 GTHGYMAPEVLQKG---VAYDSSADWFSLGCMLFKLL 385
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 111
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 112 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 167
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
+ I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 168 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI 222
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 223 ---FGATDYTSSIDVWSAGCVLAELL 245
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 45/217 (20%)
Query: 139 HRL-GQGGYGSVF------RGKLF-----NGIPVAVKMLEHLKGNGQEFINEVAT----- 181
HR+ G+GG+G V+ GK++ + + +K E L N + ++ V+T
Sbjct: 193 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 252
Query: 182 -IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIA 240
+ + FH L F + + M G L + S H S ++ A
Sbjct: 253 IVCMSYAFHTPDKLSF---------ILDLMNGGDLHYHL------SQHGVFSEADMRFYA 297
Query: 241 FGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR 300
+ G+E++H N+ +++ D+KP NILLD + +ISD GLA C D S A+
Sbjct: 298 AEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA--C--DFSKKKPHASV 350
Query: 301 GTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEMV 335
GT GY+APE+ + V+Y S D +S G ML +++
Sbjct: 351 GTHGYMAPEVLQKG---VAYDSSADWFSLGCMLFKLL 384
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 136 KFKHRLGQGGYGSVFRGKLF----NGIPVAVKMLE----HLKGNGQEFINEVATIGRIHH 187
+ +LG G +G V RG+ + VAVK L+ +FI EV + + H
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 74
Query: 188 FHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
+++RL G + +V E P GSL + H L L + A VA G+
Sbjct: 75 RNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLLG--TLSRYAVQVAEGM 128
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDISIVSLTAARGTAGYI 306
YL ++R +H D+ N+LL KI DFGL + L D V + +
Sbjct: 129 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 307 APE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
APE L +R F S+ SD + +G+ L EM
Sbjct: 186 APESLKTRTF---SHASDTWMFGVTLWEM 211
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 45/217 (20%)
Query: 139 HRL-GQGGYGSVF------RGKLF-----NGIPVAVKMLEHLKGNGQEFINEVAT----- 181
HR+ G+GG+G V+ GK++ + + +K E L N + ++ V+T
Sbjct: 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 182 -IGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIA 240
+ + FH L F + + M G L + S H S ++ A
Sbjct: 254 IVCMSYAFHTPDKLSF---------ILDLMNGGDLHYHL------SQHGVFSEADMRFYA 298
Query: 241 FGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR 300
+ G+E++H N+ +++ D+KP NILLD + +ISD GLA C D S A+
Sbjct: 299 AEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA--C--DFSKKKPHASV 351
Query: 301 GTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEMV 335
GT GY+APE+ + V+Y S D +S G ML +++
Sbjct: 352 GTHGYMAPEVLQKG---VAYDSSADWFSLGCMLFKLL 385
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 175 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI 228
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 229 ---FGATDYTSSIDVWSAGCVLAELL 251
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 173
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
+ I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 174 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI 228
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 229 ---FGATDYTSSIDVWSAGCVLAELL 251
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 42/194 (21%)
Query: 141 LGQGGYGSVFRG-----------KLFNGI----PVAVKMLEHLKGNGQEFINEVATIGRI 185
LGQG +VFRG K+FN I PV V+M E + ++
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM------------REFEVLKKL 64
Query: 186 HHFHIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGV 243
+H +IV+L E T R L+ EF P GSL + +N+ L + + V
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG---LPESEFLIVLRDV 121
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILL----DHNFQPKISDFGLAKLCSKDISIVSLTAA 299
G+ +L + I+H +IKP NI+ D K++DFG A+ D VSL
Sbjct: 122 VGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY-- 176
Query: 300 RGTAGYIAPELFSR 313
GT Y+ P+++ R
Sbjct: 177 -GTEEYLHPDMYER 189
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 136 KFKHRLGQGGYGSVFRGKLF----NGIPVAVKMLEHLKGNGQE----FINEVATIGRIHH 187
+ +LG G +G V RG+ + VAVK L+ + E FI EV + + H
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 188 FHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
+++RL G + +V E P GSL + H L L + A VA G+
Sbjct: 71 RNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLLG--TLSRYAVQVAEGM 124
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDISIVSLTAARGTAGYI 306
YL ++R +H D+ N+LL KI DFGL + L D V + +
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 181
Query: 307 APE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
APE L +R F S+ SD + +G+ L EM
Sbjct: 182 APESLKTRTF---SHASDTWMFGVTLWEM 207
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 91
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 92 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 148
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 149 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI 202
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 203 ---FGATDYTSSIDVWSAGCVLAELL 225
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 102
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 103 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 159
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 160 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI 213
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 214 ---FGATDYTSSIDVWSAGCVLAELL 236
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 119
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 120 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 175
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
+ I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 176 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI 230
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 231 ---FGATDYTSSIDVWSAGCVLAELL 253
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 23/235 (9%)
Query: 110 VEKFLEDYR-TVNPTRYTYKELKKITSKFKHRLGQGGYGSV--FRGKLFNGIPVAVKML- 165
++ FL Y+ T+N R +K + +G+G +G V R K + A+K+L
Sbjct: 52 IDNFLSRYKDTINKIRDL--RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKV-YAMKLLS 108
Query: 166 --EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRA-LVYEFMPNGSLEKFIFSK 222
E +K + F E I + V L + + R +V E+MP G L +
Sbjct: 109 KFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--- 165
Query: 223 TNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
S+ P W + F A V L + +H D+KP N+LLD + K++DFG
Sbjct: 166 --SNYDVPEKWAR-----FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 218
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSY--KSDVYSYGMMLLEMV 335
+K+ +V A GT YI+PE+ G+ Y + D +S G+ L EM+
Sbjct: 219 TCMKMNKE-GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 136 KFKHRLGQGGYGSVFRGKLF----NGIPVAVKMLE----HLKGNGQEFINEVATIGRIHH 187
+ +LG G +G V RG+ + VAVK L+ +FI EV + + H
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80
Query: 188 FHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
+++RL G + +V E P GSL + H L L + A VA G+
Sbjct: 81 RNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLLG--TLSRYAVQVAEGM 134
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDISIVSLTAARGTAGYI 306
YL ++R +H D+ N+LL KI DFGL + L D V + +
Sbjct: 135 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 191
Query: 307 APE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
APE L +R F S+ SD + +G+ L EM
Sbjct: 192 APESLKTRTF---SHASDTWMFGVTLWEM 217
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 161 AVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIF 220
AVK+++ K + E I + G+ H +I+ L +G +V E M G L I
Sbjct: 51 AVKIIDKSKRDPTEEIEILLRYGQ--HPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL 108
Query: 221 SKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNIL-LDHNFQP--- 276
+ + S + + F + + VEYLH Q ++H D+KP NIL +D + P
Sbjct: 109 RQ------KFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESI 159
Query: 277 KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+I DFG AK + + L TA ++APE+ R + + D++S G++L M+
Sbjct: 160 RICDFGFAKQLRAENGL--LMTPCYTANFVAPEVLERQGYDAA--CDIWSLGVLLYTML 214
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 121
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 122 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 177
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
+ I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 178 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI 232
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 233 ---FGATDYTSSIDVWSAGCVLAELL 255
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 136 KFKHRLGQGGYGSVFRGKLF----NGIPVAVKMLE----HLKGNGQEFINEVATIGRIHH 187
+ +LG G +G V RG+ + VAVK L+ +FI EV + + H
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 188 FHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
+++RL G + +V E P GSL + H L L + A VA G+
Sbjct: 71 RNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLLG--TLSRYAVQVAEGM 124
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDISIVSLTAARGTAGYI 306
YL ++R +H D+ N+LL KI DFGL + L D V + +
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 307 APE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
APE L +R F S+ SD + +G+ L EM
Sbjct: 182 APESLKTRTF---SHASDTWMFGVTLWEM 207
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 162
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 163 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 218
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
+ I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 219 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI 273
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 274 ---FGATDYTSSIDVWSAGCVLAELL 296
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 22/235 (9%)
Query: 108 LKVEKFLEDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFR-GKLFNGIPVAVKM-- 164
L+ K LE + T + ELK + LG G G VF+ +G+ +A K+
Sbjct: 3 LQQRKRLEAFLT---QKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH 59
Query: 165 LEHLKGNGQEFINEVATIGRIHHFHIVRLLG-FCSEGTRRALVYEFMPNGSLEKFIFSKT 223
LE + I E+ + + +IV G F S+G ++ E M GSL++ + K
Sbjct: 60 LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQ-VLKKA 117
Query: 224 NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL 283
+ + L K++ V +G+ YL + +I+H D+KP NIL++ + K+ DFG+
Sbjct: 118 GR-----IPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV 170
Query: 284 AKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
+ ++ + GT Y++PE S +SD++S G+ L+EM R
Sbjct: 171 SGQLIDSMA----NSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 14/161 (8%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
E++ + + H HI++L + T +V E+ G L +I K + ++ ++ +
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEK------KRMTEDEGR 111
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT 297
+ + +EY H+ +I+H D+KP N+LLD N KI+DFGL+ + + L
Sbjct: 112 RFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG---NFLK 165
Query: 298 AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
+ G+ Y APE+ + + DV+S G++L M+ R
Sbjct: 166 TSCGSPNYAAPEVINGKL-YAGPEVDVWSCGIVLYVMLVGR 205
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 96
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 97 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 153
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 154 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI 207
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 208 ---FGATDYTSSIDVWSAGCVLAELL 230
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 114 NNIVKXQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 19/219 (8%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFR-GKLFNGIPVAVKM--LEHLKGNGQEFINEVATIGRI 185
ELK + LG G G VF+ +G+ +A K+ LE + I E+ +
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 186 HHFHIVRLLG-FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
+ +IV G F S+G ++ E M GSL++ + K + + L K++ V
Sbjct: 62 NSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQ-VLKKAGR-----IPEQILGKVSIAVI 114
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAG 304
+G+ YL + +I+H D+KP NIL++ + K+ DFG++ ++ + GT
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRS 168
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKNKDP 343
Y++PE S +SD++S G+ L+EM R P
Sbjct: 169 YMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 153 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI 206
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 207 ---FGATDYTSSIDVWSAGCVLAELL 229
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 136 KFKHRLGQGGYGSVFRGKLF----NGIPVAVKMLE----HLKGNGQEFINEVATIGRIHH 187
+ +LG G +G V RG+ + VAVK L+ +FI EV + + H
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 74
Query: 188 FHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
+++RL G + +V E P GSL + H L L + A VA G+
Sbjct: 75 RNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLLG--TLSRYAVQVAEGM 128
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDISIVSLTAARGTAGYI 306
YL ++R +H D+ N+LL KI DFGL + L D V + +
Sbjct: 129 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 307 APE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
APE L +R F S+ SD + +G+ L EM
Sbjct: 186 APESLKTRTF---SHASDTWMFGVTLWEM 211
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 136 KFKHRLGQGGYGSVFRGKLF----NGIPVAVKMLEHLKGNGQE----FINEVATIGRIHH 187
+ +LG G +G V RG+ + VAVK L+ + E FI EV + + H
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 188 FHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
+++RL G + +V E P GSL + H L L + A VA G+
Sbjct: 71 RNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLLG--TLSRYAVQVAEGM 124
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDISIVSLTAARGTAGYI 306
YL ++R +H D+ N+LL KI DFGL + L D V + +
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 307 APE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
APE L +R F S+ SD + +G+ L EM
Sbjct: 182 APESLKTRTF---SHASDTWMFGVTLWEM 207
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 88
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 89 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 145
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 146 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI 199
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 200 ---FGATDYTSSIDVWSAGCVLAELL 222
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGK-LFNGIPVAVKM--LEHLKGNGQEFINEVATIGRI 185
ELK + LG G G V + + +G+ +A K+ LE + I E+ +
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 71
Query: 186 HHFHIVRLLG-FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
+ +IV G F S+G ++ E M GSL++ + + + E L K++ V
Sbjct: 72 NSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVL------KEAKRIPEEILGKVSIAVL 124
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAG 304
RG+ YL + +I+H D+KP NIL++ + K+ DFG++ ++ + GT
Sbjct: 125 RGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRS 178
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
Y+APE S +SD++S G+ L+E+ R
Sbjct: 179 YMAPERLQGT--HYSVQSDIWSMGLSLVELAVGR 210
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 139 HRLGQGGYGSVFR-GKLFNGIPVAVKMLEH---LKGNGQEFINEVATIGRIHHFHIVRLL 194
+ +G G YG + + +G + K L++ + Q ++EV + + H +IVR
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 195 GFCSEGTRRAL--VYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
+ T L V E+ G L I T + L E + ++ + ++ H+
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY--LDEEFVLRVMTQLTLALKECHR 129
Query: 253 GCN--QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPEL 310
+ +LH D+KP N+ LD K+ DFGLA++ + D GT Y++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV--GTPYYMSPEQ 187
Query: 311 FSRNFGEVSY--KSDVYSYGMMLLEM 334
+R +SY KSD++S G +L E+
Sbjct: 188 MNR----MSYNEKSDIWSLGCLLYEL 209
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 23/235 (9%)
Query: 110 VEKFLEDYR-TVNPTRYTYKELKKITSKFKHRLGQGGYGSV--FRGKLFNGIPVAVKML- 165
++ FL Y+ T+N R +K + +G+G +G V R K + A+K+L
Sbjct: 47 IDNFLSRYKDTINKIRDL--RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKV-YAMKLLS 103
Query: 166 --EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRA-LVYEFMPNGSLEKFIFSK 222
E +K + F E I + V L + + R +V E+MP G L +
Sbjct: 104 KFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--- 160
Query: 223 TNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
S+ P W + F A V L + +H D+KP N+LLD + K++DFG
Sbjct: 161 --SNYDVPEKWAR-----FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 213
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSY--KSDVYSYGMMLLEMV 335
+K+ +V A GT YI+PE+ G+ Y + D +S G+ L EM+
Sbjct: 214 TCMKMNKE-GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 136 KFKHRLGQGGYGSVFRGKLF----NGIPVAVKMLE----HLKGNGQEFINEVATIGRIHH 187
+ +LG G +G V RG+ + VAVK L+ +FI EV + + H
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80
Query: 188 FHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
+++RL G + +V E P GSL + H L L + A VA G+
Sbjct: 81 RNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLLG--TLSRYAVQVAEGM 134
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK-LCSKDISIVSLTAARGTAGYI 306
YL ++R +H D+ N+LL KI DFGL + L D V + +
Sbjct: 135 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 191
Query: 307 APE-LFSRNFGEVSYKSDVYSYGMMLLEM 334
APE L +R F S+ SD + +G+ L EM
Sbjct: 192 APESLKTRTF---SHASDTWMFGVTLWEM 217
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFR-GKLFNGIPVAVKM--LEHLKGNGQEFINEVATIGRI 185
ELK + LG G G VF+ +G+ +A K+ LE + I E+ +
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 186 HHFHIVRLLG-FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
+ +IV G F S+G ++ E M GSL++ + K + + L K++ V
Sbjct: 62 NSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQ-VLKKAGR-----IPEQILGKVSIAVI 114
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAG 304
+G+ YL + +I+H D+KP NIL++ + K+ DFG++ ++ + GT
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRS 168
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
Y++PE S +SD++S G+ L+EM R
Sbjct: 169 YMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI 194
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 195 ---FGATDYTSSIDVWSAGCVLAELL 217
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 153 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI 206
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 207 ---FGATDYTSSIDVWSAGCVLAELL 229
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 22/202 (10%)
Query: 141 LGQGGYGSVFR------GKLFNGIPVAVKMLEHLKGNGQEFINEVATIGR-IHHFHIVRL 193
LG+GG+ F ++F G V +L LK + +E ++ +I R + H H+V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
GF + +V E SL + K + P + L++I G +YLH+
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGC----QYLHRN 134
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
R++H D+K N+ L+ + + KI DFGLA D + GT YIAPE+ S+
Sbjct: 135 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLSK 189
Query: 314 NFGEVSYKSDVYSYGMMLLEMV 335
G S++ DV+S G ++ ++
Sbjct: 190 K-GH-SFEVDVWSIGCIMYTLL 209
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 11 PTFYR-QELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 64
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 65 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 118
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 119 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFG 175
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 176 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 19/219 (8%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFR-GKLFNGIPVAVKM--LEHLKGNGQEFINEVATIGRI 185
ELK + LG G G VF+ +G+ +A K+ LE + I E+ +
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 186 HHFHIVRLLG-FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
+ +IV G F S+G ++ E M GSL++ + K + + L K++ V
Sbjct: 62 NSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQ-VLKKAGR-----IPEQILGKVSIAVI 114
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAG 304
+G+ YL + +I+H D+KP NIL++ + K+ DFG++ ++ + GT
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRS 168
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRKNKDP 343
Y++PE S +SD++S G+ L+EM R P
Sbjct: 169 YMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI 194
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 195 ---FGATDYTSSIDVWSAGCVLAELL 217
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 23/235 (9%)
Query: 110 VEKFLEDYR-TVNPTRYTYKELKKITSKFKHRLGQGGYGSV--FRGKLFNGIPVAVKML- 165
++ FL Y+ T+N R +K + +G+G +G V R K + A+K+L
Sbjct: 52 IDNFLSRYKDTINKIRDL--RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKV-YAMKLLS 108
Query: 166 --EHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRA-LVYEFMPNGSLEKFIFSK 222
E +K + F E I + V L + + R +V E+MP G L +
Sbjct: 109 KFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--- 165
Query: 223 TNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
S+ P W + F A V L + +H D+KP N+LLD + K++DFG
Sbjct: 166 --SNYDVPEKWAR-----FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 218
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSY--KSDVYSYGMMLLEMV 335
+K+ +V A GT YI+PE+ G+ Y + D +S G+ L EM+
Sbjct: 219 TCMKMNKE-GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 33/261 (12%)
Query: 86 LFALVIFLIYKSRESEKEKETQL-KVEKFLEDYRTVNPTRYTYKELKKITSKFKHRLGQG 144
L +LV+ L + + K + L + EK ++ R + Y +K I G+G
Sbjct: 35 LNSLVLDLDFPALRKNKNIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVI--------GRG 86
Query: 145 GYGSV--FRGKLFNGIPVAVKMLEHL----KGNGQEFINEVATIGRIHHFHIVRLLGFCS 198
+G V R K + A+K+L + + F E + + +V+L
Sbjct: 87 AFGEVQLVRHKASQKV-YAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ 145
Query: 199 EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRI 258
+ +V E+MP G L + S+ P W K F A V L + +
Sbjct: 146 DDKYLYMVMEYMPGGDLVNLM-----SNYDVPEKWAK-----FYTAEVVLALDAIHSMGL 195
Query: 259 LHFDIKPHNILLDHNFQPKISDFGLAKLCSK--DISIVSLTAARGTAGYIAPELFSRNFG 316
+H D+KP N+LLD + K++DFG C K + +V A GT YI+PE+ G
Sbjct: 196 IHRDVKPDNMLLDKHGHLKLADFG---TCMKMDETGMVHCDTAVGTPDYISPEVLKSQGG 252
Query: 317 EVSY--KSDVYSYGMMLLEMV 335
+ Y + D +S G+ L EM+
Sbjct: 253 DGYYGRECDWWSVGVFLFEML 273
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 13 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 66
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 67 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 120
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 121 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 178 LARHTADE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 87
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 88 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH- 143
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
+ I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 144 --SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI 198
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 199 ---FGATDYTSSIDVWSAGCVLAELL 221
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 84
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 85 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 141
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 142 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI 195
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 196 ---FGATDYTSSIDVWSAGCVLAELL 218
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 141 LGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL-LGFC 197
+G G +G V++ KL + G VA+K + K F N E+ + ++ H +IVRL F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 198 SEGTRRALVY-----EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
S G ++ VY +++P + ++ S + + L +K + + R + Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 253 GCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
I H DIKP N+LLD + K+ DFG AK + VS +R Y APEL
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI 194
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y S DV+S G +L E++
Sbjct: 195 ---FGATDYTSSIDVWSAGCVLAELL 217
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFR-GKLFNGIPVAVKM--LEHLKGNGQEFINEVATIGRI 185
ELK + LG G G VF+ +G+ +A K+ LE + I E+ +
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 186 HHFHIVRLLG-FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
+ +IV G F S+G ++ E M GSL++ + K + + L K++ V
Sbjct: 62 NSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQ-VLKKAGR-----IPEQILGKVSIAVI 114
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAG 304
+G+ YL + +I+H D+KP NIL++ + K+ DFG++ ++ + GT
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRS 168
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
Y++PE S +SD++S G+ L+EM R
Sbjct: 169 YMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 36/212 (16%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEH----LKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G V K G AVK++ K + + + EV + ++ H +I +L
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
F + LV E G L I S+ + S +I V G+ Y H+
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEIISR------KRFSEVDAARIIRQVLSGITYXHKN-- 145
Query: 256 QRILHFDIKPHNILLDHNFQP---KISDFGLAKLCSKDISIVSLTAAR------GTAGYI 306
+I+H D+KP N+LL+ + +I DFGL+ A++ GTA YI
Sbjct: 146 -KIVHRDLKPENLLLESKSKDANIRIIDFGLS---------THFEASKKXKDKIGTAYYI 195
Query: 307 APELFSRNFGEVSYKSDVYSYGMML-LEMVGC 337
APE+ + E K DV+S G++L + + GC
Sbjct: 196 APEVLHGTYDE---KCDVWSTGVILYILLSGC 224
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 32/229 (13%)
Query: 115 EDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNGIPV----AVKMLEHLKG 170
E + +P+++ EL K+ LGQG +G VF K +G A+K+L+
Sbjct: 16 EGHEKADPSQF---ELLKV-------LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL 65
Query: 171 NGQEFIN---EVATIGRIHHFHIVRL-LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSS 226
++ + E + ++H IV+L F +EG + L+ +F+ G L T S
Sbjct: 66 KVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG-KLYLILDFLRGGDL------FTRLS 118
Query: 227 SHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKL 286
+ E +K +A +++LH + I++ D+KP NILLD K++DFGL+K
Sbjct: 119 KEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK- 174
Query: 287 CSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
S D + + GT Y+APE+ +R S +D +S+G+++ EM+
Sbjct: 175 ESIDHEKKAYSFC-GTVEYMAPEVVNRRGHTQS--ADWWSFGVLMFEML 220
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFR-GKLFNGIPVAVKM--LEHLKGNGQEFINEVATIGRI 185
ELK + LG G G VF+ +G+ +A K+ LE + I E+ +
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 186 HHFHIVRLLG-FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
+ +IV G F S+G ++ E M GSL++ + K + + L K++ V
Sbjct: 62 NSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQ-VLKKAGR-----IPEQILGKVSIAVI 114
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAG 304
+G+ YL + +I+H D+KP NIL++ + K+ DFG++ ++ + GT
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRS 168
Query: 305 YIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
Y++PE S +SD++S G+ L+EM R
Sbjct: 169 YMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 136 KFKHRLGQGGYGSVFRG-KLFNGIPVAVKML--EHLKGNGQEFINEVATIGRIHHFHIVR 192
+ K RLG GG+G V R G VA+K E N + + E+ + +++H ++V
Sbjct: 18 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 193 L------LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
L + L E+ G L K++ N L ++ + ++
Sbjct: 78 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG---LKEGPIRTLLSDISSA 134
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQP---KISDFGLAK------LCSKDISIVSLT 297
+ YLH+ RI+H D+KP NI+L Q KI D G AK LC++ +
Sbjct: 135 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV------ 185
Query: 298 AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
GT Y+APEL + V+ D +S+G + E +
Sbjct: 186 ---GTLQYLAPELLEQKKYTVTV--DYWSFGTLAFECI 218
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGXVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 13 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 66
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 67 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 120
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 121 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 178 LARHTADE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 32/229 (13%)
Query: 115 EDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNGIPV----AVKMLEHLKG 170
E + +P+++ EL K+ LGQG +G VF K +G A+K+L+
Sbjct: 16 EGHEKADPSQF---ELLKV-------LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL 65
Query: 171 NGQEFIN---EVATIGRIHHFHIVRL-LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSS 226
++ + E + ++H IV+L F +EG + L+ +F+ G L T S
Sbjct: 66 KVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG-KLYLILDFLRGGDL------FTRLS 118
Query: 227 SHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKL 286
+ E +K +A +++LH + I++ D+KP NILLD K++DFGL+K
Sbjct: 119 KEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK- 174
Query: 287 CSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
S D + + GT Y+APE+ +R S +D +S+G+++ EM+
Sbjct: 175 ESIDHEKKAYSFC-GTVEYMAPEVVNRRGHTQS--ADWWSFGVLMFEML 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 136 KFKHRLGQGGYGSVFRG-KLFNGIPVAVKML--EHLKGNGQEFINEVATIGRIHHFHIVR 192
+ K RLG GG+G V R G VA+K E N + + E+ + +++H ++V
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 193 L------LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
L + L E+ G L K++ N L ++ + ++
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG---LKEGPIRTLLSDISSA 133
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQP---KISDFGLAK------LCSKDISIVSLT 297
+ YLH+ RI+H D+KP NI+L Q KI D G AK LC++ +
Sbjct: 134 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV------ 184
Query: 298 AARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
GT Y+APEL + V+ D +S+G + E +
Sbjct: 185 ---GTLQYLAPELLEQKKYTVTV--DYWSFGTLAFECI 217
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 32/229 (13%)
Query: 115 EDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGKLFNGIPV----AVKMLEHLKG 170
E + +P+++ EL K+ LGQG +G VF K +G A+K+L+
Sbjct: 17 EGHEKADPSQF---ELLKV-------LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL 66
Query: 171 NGQEFIN---EVATIGRIHHFHIVRL-LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSS 226
++ + E + ++H IV+L F +EG + L+ +F+ G L T S
Sbjct: 67 KVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG-KLYLILDFLRGGDL------FTRLS 119
Query: 227 SHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKL 286
+ E +K +A +++LH + I++ D+KP NILLD K++DFGL+K
Sbjct: 120 KEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK- 175
Query: 287 CSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
S D + + GT Y+APE+ +R S +D +S+G+++ EM+
Sbjct: 176 ESIDHEKKAYSFC-GTVEYMAPEVVNRRGHTQS--ADWWSFGVLMFEML 221
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 95/196 (48%), Gaps = 14/196 (7%)
Query: 144 GGYGSVFRGK-LFNGIPVAVKMLE-HLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGT 201
G +G V++ + + A K+++ + ++++ E+ + H +IV+LL
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 202 RRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHF 261
++ EF G+++ + RPL+ +++ + + YLH + +I+H
Sbjct: 81 NLWILIEFCAGGAVDAVMLE-----LERPLTESQIQVVCKQTLDALNYLH---DNKIIHR 132
Query: 262 DIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF---SRNFGEV 318
D+K NIL + K++DFG++ ++ I + GT ++APE+ +
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVSAKNTR-TXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 191
Query: 319 SYKSDVYSYGMMLLEM 334
YK+DV+S G+ L+EM
Sbjct: 192 DYKADVWSLGITLIEM 207
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 11 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 64
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 65 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 118
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 119 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFG 175
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 176 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 24/194 (12%)
Query: 139 HRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCS 198
HR + G VF K N P + + NE++ + ++HH ++ L
Sbjct: 68 HRCVEKATGRVFVAKFIN-TPYPL--------DKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 199 EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRI 258
+ L+ EF+ G L F + + ++ +S ++ G++++H+ I
Sbjct: 119 DKYEMVLILEFLSGGEL----FDRIAAEDYK-MSEAEVINYMRQACEGLKHMHE---HSI 170
Query: 259 LHFDIKPHNILLDHNFQP--KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
+H DIKP NI+ + KI DFGLA + D IV +T A TA + APE+ R
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPD-EIVKVTTA--TAEFAAPEIVDRE-- 225
Query: 317 EVSYKSDVYSYGMM 330
V + +D+++ G++
Sbjct: 226 PVGFYTDMWAIGVL 239
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 141 LGQGGYGSVFR------GKLFNGIPVAVKMLEHLKGNGQEFINEVATIGR-IHHFHIVRL 193
LG+GG+ F ++F G V +L LK + +E ++ +I R + H H+V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVGF 104
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
GF + +V E SL + K + P + L++I G +YLH+
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGC----QYLHRN 158
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
R++H D+K N+ L+ + + KI DFGLA D + GT YIAPE+ S+
Sbjct: 159 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLSK 213
Query: 314 NFGEVSYKSDVYSYGMMLLEMV 335
S++ DV+S G ++ ++
Sbjct: 214 KGH--SFEVDVWSIGCIMYTLL 233
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
+E EV + I H +I+ L T L+ E + G L F+ K + +
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 119
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF-QPKIS--DFGLAKLCS 288
+ LK+I GV YLH ++RI HFD+KP NI LLD N P+I DFG+A
Sbjct: 120 F--LKQIL----DGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 170
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
++ GT ++APE+ N+ + ++D++S G++
Sbjct: 171 AGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 207
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 13 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 66
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 67 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 120
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 121 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 178 LARHTADE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 17 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 70
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 71 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 124
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 125 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFG 181
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 182 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 19/200 (9%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNG---QEFINEVATIGRIHHFHIVRLLGF 196
+G+G + V + + G VAVK+++ + N Q+ EV + ++H +IV+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
LV E+ G + ++ + H + ++ + + V+Y HQ +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA------HGRMKEKEARAKFRQIVSAVQYCHQ---K 132
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNF 315
I+H D+K N+LLD + KI+DFG S + + + L A G Y APELF
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGF----SNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ + DV+S G++L +V
Sbjct: 189 YD-GPEVDVWSLGVILYTLV 207
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 36/234 (15%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNGQE 174
PT Y +EL K + R +G G YGSV + +G+ +AVK L Q
Sbjct: 35 PTFYR-QELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSR---PFQS 90
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT--------N 224
I+ T + +RLL L+ F P SLE+F ++ T N
Sbjct: 91 IIHAKRT------YRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNN 144
Query: 225 SSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLA 284
+ L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFGLA
Sbjct: 145 IVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 201
Query: 285 KLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 202 RHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
+E EV + I H +I+ L T L+ E + G L F+ K + +
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 112
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF-QPKIS--DFGLAKLCS 288
+ LK+I GV YLH ++RI HFD+KP NI LLD N P+I DFG+A
Sbjct: 113 F--LKQIL----DGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 163
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
++ GT ++APE+ N+ + ++D++S G++
Sbjct: 164 AGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 200
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
+E EV + I H +I+ L T L+ E + G L F+ K + +
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 133
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF-QPKIS--DFGLAKLCS 288
+ LK+I GV YLH ++RI HFD+KP NI LLD N P+I DFG+A
Sbjct: 134 F--LKQIL----DGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 184
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
++ GT ++APE+ N+ + ++D++S G++
Sbjct: 185 AGNEFKNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 221
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQE----FINEVATIGRIHHFHIVRLLG 195
LG+G YG V + + + +G +AVK + N QE ++ ++ + V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ E M + SL+KF + P + L KIA + + +E+LH +
Sbjct: 118 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIP--EDILGKIAVSIVKALEHLHSKLS 174
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
++H D+KP N+L++ Q K+ DFG++ + V+ T G Y+APE +
Sbjct: 175 --VIHRDVKPSNVLINALGQVKMCDFGISGYL---VDSVAKTIDAGCKPYMAPERINPEL 229
Query: 316 GEVSY--KSDVYSYGMMLLEMVGCR 338
+ Y KSD++S G+ ++E+ R
Sbjct: 230 NQKGYSVKSDIWSLGITMIELAILR 254
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 19/205 (9%)
Query: 136 KFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNG---QEFINEVATIGRIHHFHIV 191
+ + +G+G + V + + G VAVK+++ + N Q+ EV + ++H +IV
Sbjct: 18 RLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIV 77
Query: 192 RLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLH 251
+L LV E+ G + ++ + H + ++ + + V+Y H
Sbjct: 78 KLFEVIETEKTLYLVMEYASGGEVFDYLVA------HGRMKEKEARAKFRQIVSAVQYCH 131
Query: 252 QGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPEL 310
Q + I+H D+K N+LLD + KI+DFG S + ++ + L G+ Y APEL
Sbjct: 132 Q---KYIVHRDLKAENLLLDGDMNIKIADFGF----SNEFTVGNKLDTFCGSPPYAAPEL 184
Query: 311 FSRNFGEVSYKSDVYSYGMMLLEMV 335
F + + DV+S G++L +V
Sbjct: 185 FQGKKYD-GPEVDVWSLGVILYTLV 208
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 141 LGQGGYGSVFR------GKLFNGIPVAVKMLEHLKGNGQEFINEVATIGR-IHHFHIVRL 193
LG+GG+ F ++F G V +L LK + +E ++ +I R + H H+V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVGF 106
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
GF + +V E SL + K + P + L++I G +YLH+
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGC----QYLHR- 159
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
R++H D+K N+ L+ + + KI DFGLA D + GT YIAPE+ S+
Sbjct: 160 --NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLSK 215
Query: 314 NFGEVSYKSDVYSYGMMLLEMV 335
S++ DV+S G ++ ++
Sbjct: 216 KGH--SFEVDVWSIGCIMYTLL 235
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 11 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 64
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 65 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 118
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 119 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 175
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 176 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 5 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 58
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 59 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 112
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 113 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 169
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 170 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 11 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 64
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 65 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 118
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 119 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 175
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 176 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 12 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 65
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 66 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 119
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 120 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFG 176
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 177 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 13 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 66
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 67 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 120
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 121 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 178 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 8 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 61
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 62 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 115
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 116 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 172
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 173 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 8 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 61
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 62 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 115
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 116 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFG 172
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 173 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 18 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVK---KLSKPF 71
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 72 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 125
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 126 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 182
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 183 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 12 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 65
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 66 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 119
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 120 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 176
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 177 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 2 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 55
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 56 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 109
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 110 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 166
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 167 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 3 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 56
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 57 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 110
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 111 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 167
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 168 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 12 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 65
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 66 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 119
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 120 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 176
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 177 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 8 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 61
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 62 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 115
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 116 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 172
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 173 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 3 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 56
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 57 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 110
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 111 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 167
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 168 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 139 HRLGQGGYGSVFRG---KLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G +G VF+G + + + + LE + ++ E+ + + ++ + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ T+ ++ E++ GS + PL ++ I + +G++YLH +
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATILREILKGLDYLH---S 122
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
++ +H DIK N+LL + + K++DFG+A + D I T GT ++APE+ ++
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNTFV-GTPFWMAPEVIKQS- 179
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
K+D++S G+ +E+
Sbjct: 180 -AYDSKADIWSLGITAIELA 198
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 8 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 61
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 62 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 115
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 116 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 172
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 173 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 18 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 71
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 72 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 125
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 126 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 182
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 183 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 4 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 57
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 58 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 111
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 112 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 168
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 169 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 18 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 71
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 72 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 125
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 126 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 182
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 183 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 134 TSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRL 193
T + +G+G +G V+RGK + G VAVK+ + E+ + H +I
Sbjct: 5 TIVLQESIGKGRFGEVWRGK-WRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI--- 60
Query: 194 LGFCSEG-------TRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
LGF + T+ LV ++ +GSL ++ T ++ E + K+A A G
Sbjct: 61 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASG 113
Query: 247 VEYLH------QGCNQRILHFDIKPHNILLDHNFQPKISDFGLA--KLCSKDISIVSLTA 298
+ +LH QG I H D+K NIL+ N I+D GLA + D ++
Sbjct: 114 LAHLHMEIVGTQG-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 172
Query: 299 ARGTAGYIAPELFSRNFG----EVSYKSDVYSYGMMLLEMV 335
GT Y+APE+ + E ++D+Y+ G++ E+
Sbjct: 173 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 17 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 70
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 71 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 124
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 125 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 181
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 182 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 98/227 (43%), Gaps = 28/227 (12%)
Query: 120 VNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGK-LFNGIPVAVK--MLEHLKGNGQEFI 176
+ P Y Y+E + + RLG+G +G V R K G AVK LE + +
Sbjct: 60 LKPVDYEYREEVHWMT-HQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR------V 112
Query: 177 NEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKL 236
E+ + IV L G EG + E + GSL + I R L +
Sbjct: 113 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY--- 169
Query: 237 KKIAFGVA-RGVEYLHQGCNQRILHFDIKPHNILLDHN-FQPKISDFGLAKLCSKD---I 291
G A G+EYLH +RILH D+K N+LL + + + DFG A D
Sbjct: 170 ----LGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 222
Query: 292 SIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV-GC 337
S+++ GT ++APE+ K D++S M+L M+ GC
Sbjct: 223 SLLTGDYIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNGC 267
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 139 HRLGQGGYGSVFRG---KLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G +G VF+G + + + + LE + ++ E+ + + ++ + G
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ T+ ++ E++ GS + PL ++ I + +G++YLH +
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATILREILKGLDYLH---S 142
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
++ +H DIK N+LL + + K++DFG+A + D I T GT ++APE+ ++
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNTFV-GTPFWMAPEVIKQS- 199
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
K+D++S G+ +E+
Sbjct: 200 -AYDSKADIWSLGITAIELA 218
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 134 TSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRL 193
T + +G+G +G V+RGK + G VAVK+ + E+ + H +I
Sbjct: 10 TIVLQESIGKGRFGEVWRGK-WRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI--- 65
Query: 194 LGFCSEG-------TRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
LGF + T+ LV ++ +GSL ++ T ++ E + K+A A G
Sbjct: 66 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASG 118
Query: 247 VEYLH------QGCNQRILHFDIKPHNILLDHNFQPKISDFGLA--KLCSKDISIVSLTA 298
+ +LH QG I H D+K NIL+ N I+D GLA + D ++
Sbjct: 119 LAHLHMEIVGTQG-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 177
Query: 299 ARGTAGYIAPELFSRNFG----EVSYKSDVYSYGMMLLEMV 335
GT Y+APE+ + E ++D+Y+ G++ E+
Sbjct: 178 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 31/218 (14%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
+ +G+G +G V+RGK + G VAVK+ + E+ + H +I LGF
Sbjct: 46 LQESIGKGRFGEVWRGK-WRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI---LGF 101
Query: 197 CSEG-------TRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEY 249
+ T+ LV ++ +GSL ++ T ++ E + K+A A G+ +
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAH 154
Query: 250 LH------QGCNQRILHFDIKPHNILLDHNFQPKISDFGLA--KLCSKDISIVSLTAARG 301
LH QG I H D+K NIL+ N I+D GLA + D ++ G
Sbjct: 155 LHMEIVGTQG-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 213
Query: 302 TAGYIAPELFSRNFG----EVSYKSDVYSYGMMLLEMV 335
T Y+APE+ + E ++D+Y+ G++ E+
Sbjct: 214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 31/218 (14%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGF 196
+ +G+G +G V+RGK + G VAVK+ + E+ + H +I LGF
Sbjct: 33 LQESIGKGRFGEVWRGK-WRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI---LGF 88
Query: 197 CSEG-------TRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEY 249
+ T+ LV ++ +GSL ++ T ++ E + K+A A G+ +
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAH 141
Query: 250 LH------QGCNQRILHFDIKPHNILLDHNFQPKISDFGLA--KLCSKDISIVSLTAARG 301
LH QG I H D+K NIL+ N I+D GLA + D ++ G
Sbjct: 142 LHMEIVGTQG-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 200
Query: 302 TAGYIAPELFSRNFG----EVSYKSDVYSYGMMLLEMV 335
T Y+APE+ + E ++D+Y+ G++ E+
Sbjct: 201 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 26 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 79
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 80 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 133
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 134 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 190
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 191 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 25 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 78
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 79 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 132
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 133 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 189
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 190 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 29 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 82
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 83 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 136
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 137 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 193
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 194 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 134 TSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRL 193
T + +G+G +G V+RGK + G VAVK+ + E+ + H +I
Sbjct: 7 TIVLQESIGKGRFGEVWRGK-WRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI--- 62
Query: 194 LGFCSEG-------TRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
LGF + T+ LV ++ +GSL ++ T ++ E + K+A A G
Sbjct: 63 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASG 115
Query: 247 VEYLH------QGCNQRILHFDIKPHNILLDHNFQPKISDFGLA--KLCSKDISIVSLTA 298
+ +LH QG I H D+K NIL+ N I+D GLA + D ++
Sbjct: 116 LAHLHMEIVGTQG-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 174
Query: 299 ARGTAGYIAPELFSRNFG----EVSYKSDVYSYGMMLLEMV 335
GT Y+APE+ + E ++D+Y+ G++ E+
Sbjct: 175 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 31/220 (14%)
Query: 134 TSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRL 193
T + +G+G +G V+RGK + G VAVK+ + E+ + H +I
Sbjct: 4 TIVLQESIGKGRFGEVWRGK-WRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI--- 59
Query: 194 LGFCSEG-------TRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
LGF + T+ LV ++ +GSL ++ T ++ E + K+A A G
Sbjct: 60 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASG 112
Query: 247 VEYLH------QGCNQRILHFDIKPHNILLDHNFQPKISDFGLA--KLCSKDISIVSLTA 298
+ +LH QG I H D+K NIL+ N I+D GLA + D ++
Sbjct: 113 LAHLHMEIVGTQG-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 171
Query: 299 ARGTAGYIAPELFSRNFG----EVSYKSDVYSYGMMLLEM 334
GT Y+APE+ + E ++D+Y+ G++ E+
Sbjct: 172 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 22/202 (10%)
Query: 141 LGQGGYGSVFR------GKLFNGIPVAVKMLEHLKGNGQEFINEVATIGR-IHHFHIVRL 193
LG+GG+ F ++F G V +L LK + +E ++ +I R + H H+V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
GF + +V E SL + K + P + L++I G +YLH+
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGC----QYLHRN 136
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
R++H D+K N+ L+ + + KI DFGLA D GT YIAPE+ S+
Sbjct: 137 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLSK 191
Query: 314 NFGEVSYKSDVYSYGMMLLEMV 335
S++ DV+S G ++ ++
Sbjct: 192 KGH--SFEVDVWSIGCIMYTLL 211
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 141 LGQGGYGSVFR------GKLFNGIPVAVKMLEHLKGNGQEFINEVATIGR-IHHFHIVRL 193
LG+GG+ F ++F G V +L LK + +E ++ +I R + H H+V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
GF + +V E SL + K + P + L++I G +YLH+
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGC----QYLHRN 136
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
R++H D+K N+ L+ + + KI DFGLA D GT YIAPE+ S+
Sbjct: 137 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLSK 191
Query: 314 NFGEVSYKSDVYSYGMMLLEMV 335
G S++ DV+S G ++ ++
Sbjct: 192 K-GH-SFEVDVWSIGCIMYTLL 211
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 125 YTYKELKKITSKFKHRLGQGGYGSVFRGKLF---NGIPVAVKMLEHL--KGNGQEFINEV 179
+T ++LK + +G+G YGSV K+ +G +AVK + + ++ + ++
Sbjct: 19 FTAEDLKDLG-----EIGRGAYGSV--NKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDL 71
Query: 180 ATIGRIHHF-HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKK 238
+ R +IV+ G + E M + S +KF + S + E L K
Sbjct: 72 DVVMRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKF-YKYVYSVLDDVIPEEILGK 129
Query: 239 IAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTA 298
I + + +L + N +I+H DIKP NILLD + K+ DFG++ + + ++ T
Sbjct: 130 ITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGIS---GQLVDSIAKTR 184
Query: 299 ARGTAGYIAPELFSRNFGEVSY--KSDVYSYGMMLLEMVGCR 338
G Y+APE + Y +SDV+S G+ L E+ R
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNG---QEFINEVATIGRIHHFHIVRLLGF 196
+G+G + V + + G VAVK+++ + N Q+ EV + ++H +IV+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
LV E+ G + ++ + H + ++ + + V+Y HQ +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA------HGRMKEKEARAKFRQIVSAVQYCHQ---K 132
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
I+H D+K N+LLD + KI+DFG + + + + G+ Y APELF
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKY 189
Query: 317 EVSYKSDVYSYGMMLLEMV 335
+ + DV+S G++L +V
Sbjct: 190 D-GPEVDVWSLGVILYTLV 207
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNG---QEFINEVATIGRIHHFHIVRLLGF 196
+G+G + V + + G VAVK+++ + N Q+ EV + ++H +IV+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
LV E+ G + ++ + H + ++ + + V+Y HQ +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA------HGRMKEKEARAKFRQIVSAVQYCHQ---K 132
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
I+H D+K N+LLD + KI+DFG + + + + G+ Y APELF
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKY 189
Query: 317 EVSYKSDVYSYGMMLLEMV 335
+ + DV+S G++L +V
Sbjct: 190 D-GPEVDVWSLGVILYTLV 207
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 212 NGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLD 271
+ SL+KF + P + L KIA + + +E+LH + ++H D+KP N+L++
Sbjct: 89 DTSLDKFYKQVIDKGQTIP--EDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLIN 144
Query: 272 HNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSY--KSDVYSYGM 329
Q K+ DFG++ D V+ G Y+APE + + Y KSD++S G+
Sbjct: 145 ALGQVKMCDFGISGYLVDD---VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGI 201
Query: 330 MLLEMVGCR 338
++E+ R
Sbjct: 202 TMIELAILR 210
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 22/202 (10%)
Query: 141 LGQGGYGSVFR------GKLFNGIPVAVKMLEHLKGNGQEFINEVATIGR-IHHFHIVRL 193
LG+GG+ F ++F G V +L LK + +E ++ +I R + H H+V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVGF 86
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
GF + +V E SL + K + P + L++I G +YLH+
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGC----QYLHRN 140
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
R++H D+K N+ L+ + + KI DFGLA D GT YIAPE+ S+
Sbjct: 141 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLSK 195
Query: 314 NFGEVSYKSDVYSYGMMLLEMV 335
S++ DV+S G ++ ++
Sbjct: 196 KGH--SFEVDVWSIGCIMYTLL 215
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 139 HRLGQGGYGSVFRG---KLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G +G VF+G + + + + LE + ++ E+ + + ++ + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ T+ ++ E++ GS + PL ++ I + +G++YLH +
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATILREILKGLDYLH---S 122
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
++ +H DIK N+LL + + K++DFG+A + + + GT ++APE+ ++
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQS- 179
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
K+D++S G+ +E+
Sbjct: 180 -AYDSKADIWSLGITAIELA 198
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 114 NNIVKSQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
L + + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LCRHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 23/202 (11%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNG---QEFINEVATIGRIHHFHIVRLLGF 196
+G+G + V + + G VAVK+++ + N Q+ EV + ++H +IV+L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSW--EKLKKIAF-GVARGVEYLHQG 253
LV E+ G + ++ + W EK + F + V+Y HQ
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAH---------GWMKEKEARAKFRQIVSAVQYCHQ- 124
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
+ I+H D+K N+LLD + KI+DFG + + + + G+ Y APELF
Sbjct: 125 --KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQG 179
Query: 314 NFGEVSYKSDVYSYGMMLLEMV 335
+ + DV+S G++L +V
Sbjct: 180 KKYD-GPEVDVWSLGVILYTLV 200
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 39/227 (17%)
Query: 128 KELKKITSKFKHRL------GQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNGQEFINE 178
+EL K + RL G G YGSV + +L VAVK L Q I+
Sbjct: 17 QELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQK--VAVKKLSR---PFQSLIHA 71
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT--------NSSSH 228
T + +RLL L+ F P S+E F ++ T N
Sbjct: 72 RRT------YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS 125
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
+ LS E ++ + + + RG++Y+H I+H D+KP N+ ++ + + +I DFGLA+
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD 182
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++ +T T Y APE+ N+ + D++S G ++ E++
Sbjct: 183 EE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 223
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 85/194 (43%), Gaps = 42/194 (21%)
Query: 141 LGQGGYGSVFRG-----------KLFNGI----PVAVKMLEHLKGNGQEFINEVATIGRI 185
LGQG +VFRG K+FN I PV V+M E + ++
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM------------REFEVLKKL 64
Query: 186 HHFHIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGV 243
+H +IV+L E T R L+ EF P GSL + +N+ L + + V
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG---LPESEFLIVLRDV 121
Query: 244 ARGVEYLHQGCNQRILHFDIKPHNILL----DHNFQPKISDFGLAKLCSKDISIVSLTAA 299
G+ +L + I+H +IKP NI+ D K++DFG A+ D V L
Sbjct: 122 VGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY-- 176
Query: 300 RGTAGYIAPELFSR 313
GT Y+ P+++ R
Sbjct: 177 -GTEEYLHPDMYER 189
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 31/213 (14%)
Query: 141 LGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSE- 199
+G+G YG V+RG + G VAVK+ E+ + H +I LGF +
Sbjct: 45 VGKGRYGEVWRGS-WQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENI---LGFIASD 100
Query: 200 ------GTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLH-- 251
T+ L+ + GSL ++ T L +I +A G+ +LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT-------LDTVSCLRIVLSIASGLAHLHIE 153
Query: 252 ----QGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSL--TAARGTAGY 305
QG I H D+K NIL+ N Q I+D GLA + S+ + + + GT Y
Sbjct: 154 IFGTQG-KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 212
Query: 306 IAPELFSRNFGEVSYKS----DVYSYGMMLLEM 334
+APE+ + S D++++G++L E+
Sbjct: 213 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 139 HRLGQGGYGSVFRG---KLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
++G+G +G VF+G + + + + LE + ++ E+ + + ++ + G
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ T+ ++ E++ GS + PL ++ I + +G++YLH +
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATILREILKGLDYLH---S 137
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
++ +H DIK N+LL + + K++DFG+A + + + GT ++APE+ ++
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQS- 194
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
K+D++S G+ +E+
Sbjct: 195 -AYDSKADIWSLGITAIELA 213
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 44/240 (18%)
Query: 123 TRYT--YKELKKITSKFKHRLGQGGYGSVFR-GKLFNGIPVAVKMLEH-LKG--NGQEFI 176
+RYT + EL+KI G G +GSVF+ K +G A+K + L G + Q +
Sbjct: 3 SRYTTEFHELEKI--------GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNAL 54
Query: 177 NEV---ATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSW 233
EV A +G+ H H+VR +E + E+ GSL I S ++R +S+
Sbjct: 55 REVYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-----SENYRIMSY 107
Query: 234 EK---LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKIS-------DFGL 283
K LK + V RG+ Y+H + ++H DIKP NI + P + D+
Sbjct: 108 FKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWAS 164
Query: 284 AKLCSK--DIS----IVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGC 337
K+ K D+ I S G + ++A E+ N+ + K+D+++ + ++ G
Sbjct: 165 NKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLP-KADIFALALTVVXAAGA 223
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 31/213 (14%)
Query: 141 LGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSE- 199
+G+G YG V+RG + G VAVK+ E+ + H +I LGF +
Sbjct: 16 VGKGRYGEVWRGS-WQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENI---LGFIASD 71
Query: 200 ------GTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLH-- 251
T+ L+ + GSL ++ T L +I +A G+ +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT-------LDTVSCLRIVLSIASGLAHLHIE 124
Query: 252 ----QGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSL--TAARGTAGY 305
QG I H D+K NIL+ N Q I+D GLA + S+ + + + GT Y
Sbjct: 125 IFGTQG-KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 306 IAPELFSRNFGEVSYKS----DVYSYGMMLLEM 334
+APE+ + S D++++G++L E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 98/227 (43%), Gaps = 28/227 (12%)
Query: 120 VNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGK-LFNGIPVAVK--MLEHLKGNGQEFI 176
+ P Y Y+E + + R+G+G +G V R K G AVK LE + +
Sbjct: 46 LKPVDYEYREEVHWMT-HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR------V 98
Query: 177 NEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKL 236
E+ + IV L G EG + E + GSL + I R L +
Sbjct: 99 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY--- 155
Query: 237 KKIAFGVA-RGVEYLHQGCNQRILHFDIKPHNILLDHN-FQPKISDFGLAKLCSKD---I 291
G A G+EYLH +RILH D+K N+LL + + + DFG A D
Sbjct: 156 ----LGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208
Query: 292 SIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV-GC 337
S+++ GT ++APE+ K D++S M+L M+ GC
Sbjct: 209 SLLTGDYIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNGC 253
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 31/213 (14%)
Query: 141 LGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSE- 199
+G+G YG V+RG + G VAVK+ E+ + H +I LGF +
Sbjct: 16 VGKGRYGEVWRGS-WQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENI---LGFIASD 71
Query: 200 ------GTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLH-- 251
T+ L+ + GSL ++ T L +I +A G+ +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT-------LDTVSCLRIVLSIASGLAHLHIE 124
Query: 252 ----QGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSL--TAARGTAGY 305
QG I H D+K NIL+ N Q I+D GLA + S+ + + + GT Y
Sbjct: 125 IFGTQG-KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 306 IAPELFSRNFGEVSYKS----DVYSYGMMLLEM 334
+APE+ + S D++++G++L E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI D+G
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNG---QEFINEVATIGRIHHFHIVRLLGF 196
+G+G + V + + G VAVK+++ + N Q+ EV ++H +IV+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAF-GVARGVEYLHQGCN 255
LV E+ G + ++ + EK + F + V+Y HQ
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXK-------EKEARAKFRQIVSAVQYCHQ--- 131
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRN 314
+ I+H D+K N+LLD + KI+DFG S + + + L A G Y APELF
Sbjct: 132 KFIVHRDLKAENLLLDADXNIKIADFGF----SNEFTFGNKLDAFCGAPPYAAPELFQGK 187
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
+ + DV+S G++L +V
Sbjct: 188 KYD-GPEVDVWSLGVILYTLV 207
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 98/227 (43%), Gaps = 28/227 (12%)
Query: 120 VNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGK-LFNGIPVAVK--MLEHLKGNGQEFI 176
+ P Y Y+E + + R+G+G +G V R K G AVK LE + +
Sbjct: 62 LKPVDYEYREEVHWMT-HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR------V 114
Query: 177 NEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKL 236
E+ + IV L G EG + E + GSL + I R L +
Sbjct: 115 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY--- 171
Query: 237 KKIAFGVA-RGVEYLHQGCNQRILHFDIKPHNILLDHN-FQPKISDFGLAKLCSKD---I 291
G A G+EYLH +RILH D+K N+LL + + + DFG A D
Sbjct: 172 ----LGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 224
Query: 292 SIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV-GC 337
S+++ GT ++APE+ K D++S M+L M+ GC
Sbjct: 225 SLLTGDYIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNGC 269
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 33/209 (15%)
Query: 141 LGQGGYGSV------FRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLL 194
LG+GG+G V GK++ + K ++ KG +NE + +++ +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA-LNEKQILEKVNSRFVVSLA 250
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
LV M G L+ I+ + + F AR V Y + C
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYH--------------MGQAGFPEARAVFYAAEIC 296
Query: 255 -------NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIA 307
+RI++ D+KP NILLD + +ISD GLA + +I GT GY+A
Sbjct: 297 CGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV---GTVGYMA 353
Query: 308 PELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
PE+ ++ D ++ G +L EM+
Sbjct: 354 PEVVKNE--RYTFSPDWWALGCLLYEMIA 380
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 138 KHRLGQGGYGSVFR--GKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
K +G G Y R K N + AVK+++ K + E I + G+ H +I+ L
Sbjct: 32 KETIGVGSYSECKRCVHKATN-MEYAVKVIDKSKRDPSEEIEILLRYGQ--HPNIITLKD 88
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+G LV E M G L I + S R S+ + + + VEYLH +
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKIL-RQKFFSEREASF-----VLHTIGKTVEYLH---S 139
Query: 256 QRILHFDIKPHNIL-LDHNFQP---KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
Q ++H D+KP NIL +D + P +I DFG AK + + L TA ++APE+
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL--LMTPCYTANFVAPEVL 197
Query: 312 SRN-FGEVSYKSDVYSYGMMLLEMVG 336
R + E D++S G++L M+
Sbjct: 198 KRQGYDE---GCDIWSLGILLYTMLA 220
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 32/209 (15%)
Query: 141 LGQGGYGSVFR---------GKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIV 191
LG+GGYG VF+ GK+F + M+ + E + + H IV
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 192 RLLGFCSEGTRRALVYEFMPNGSL-----EKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
L+ G + L+ E++ G L + IF + + + L +I+ +
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFY-------LAEISMALG-- 135
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYI 306
+LHQ + I++ D+KP NI+L+H K++DFGL K D ++ GT Y+
Sbjct: 136 --HLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC--GTIEYM 188
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMV 335
APE+ R+ + D +S G ++ +M+
Sbjct: 189 APEILMRSGHNRAV--DWWSLGALMYDML 215
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 21/181 (11%)
Query: 161 AVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIF 220
AVK+++ K + E I + G+ H +I+ L +G LV E M G L I
Sbjct: 56 AVKVIDKSKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL 113
Query: 221 SKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNIL-LDHNFQP--- 276
+ S R S+ + + + VEYLH +Q ++H D+KP NIL +D + P
Sbjct: 114 -RQKFFSEREASF-----VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECL 164
Query: 277 KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN-FGEVSYKSDVYSYGMMLLEMV 335
+I DFG AK + + L TA ++APE+ R + E D++S G++L M+
Sbjct: 165 RICDFGFAKQLRAENGL--LMTPCYTANFVAPEVLKRQGYDE---GCDIWSLGILLYTML 219
Query: 336 G 336
Sbjct: 220 A 220
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 19/167 (11%)
Query: 169 KGNGQEFIN-EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSS 227
+G +E I EV+ + I H +++ L T L+ E + G L F+ K +
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--- 110
Query: 228 HRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF-QP--KISDFGL 283
L+ E+ + + GV YLH + +I HFD+KP NI LLD N +P KI DFGL
Sbjct: 111 ---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 284 AKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
A ++ GT ++APE+ N+ + ++D++S G++
Sbjct: 165 AHKIDFGNEFKNIF---GTPAFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 33/209 (15%)
Query: 141 LGQGGYGSV------FRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLL 194
LG+GG+G V GK++ + K ++ KG +NE + +++ +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA-LNEKQILEKVNSRFVVSLA 250
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
LV M G L+ I+ + + F AR V Y + C
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYH--------------MGQAGFPEARAVFYAAEIC 296
Query: 255 -------NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIA 307
+RI++ D+KP NILLD + +ISD GLA + +I GT GY+A
Sbjct: 297 CGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV---GTVGYMA 353
Query: 308 PELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
PE+ ++ D ++ G +L EM+
Sbjct: 354 PEVVKNE--RYTFSPDWWALGCLLYEMIA 380
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 101/208 (48%), Gaps = 18/208 (8%)
Query: 139 HRLGQGGYGSVFRG---KLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
R+G+G +G VF+G + + + + LE + ++ E+ + + ++ + G
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+G++ ++ E++ GS + + P ++ + + +G++YLH +
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRAG-------PFDEFQIATMLKEILKGLDYLH---S 138
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
++ +H DIK N+LL K++DFG+A + D I T GT ++APE+ ++
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT-DTQIKRNTFV-GTPFWMAPEVIQQS- 195
Query: 316 GEVSYKSDVYSYGMMLLEMV-GCRKNKD 342
K+D++S G+ +E+ G N D
Sbjct: 196 -AYDSKADIWSLGITAIELAKGEPPNSD 222
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 32/209 (15%)
Query: 141 LGQGGYGSVFR---------GKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIV 191
LG+GGYG VF+ GK+F + M+ + E + + H IV
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 192 RLLGFCSEGTRRALVYEFMPNGSL-----EKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
L+ G + L+ E++ G L + IF + + + L +I+ +
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFY-------LAEISMALG-- 135
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYI 306
+LHQ + I++ D+KP NI+L+H K++DFGL K D ++ GT Y+
Sbjct: 136 --HLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC--GTIEYM 188
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMV 335
APE+ R+ + D +S G ++ +M+
Sbjct: 189 APEILMRSGHNRAV--DWWSLGALMYDML 215
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNG---QEFINEVATIGRIHHFHIVRLLGF 196
+G+G + V + + G VAV++++ + N Q+ EV + ++H +IV+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
LV E+ G + ++ + H + ++ + + V+Y HQ +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA------HGRMKEKEARAKFRQIVSAVQYCHQ---K 132
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFG 316
I+H D+K N+LLD + KI+DFG + + + + G+ Y APELF
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKY 189
Query: 317 EVSYKSDVYSYGMMLLEMV 335
+ + DV+S G++L +V
Sbjct: 190 D-GPEVDVWSLGVILYTLV 207
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGYVATRWYRAPEIM-LNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 39/227 (17%)
Query: 128 KELKKITSKFKHRL------GQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNGQEFINE 178
+EL K + RL G G YGSV + +L VAVK L Q I+
Sbjct: 9 QELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQK--VAVKKLSR---PFQSLIHA 63
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT--------NSSSH 228
T + +RLL L+ F P S+E F ++ T N
Sbjct: 64 RRT------YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC 117
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
+ LS E ++ + + + RG++Y+H I+H D+KP N+ ++ + + +I DFGLA+
Sbjct: 118 QALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQAD 174
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++ +T T Y APE+ N+ + D++S G ++ E++
Sbjct: 175 EE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 215
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 97/218 (44%), Gaps = 29/218 (13%)
Query: 136 KFKHRLGQGGYG--SVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRL 193
F +G G +G + R KL + VAVK +E + E+ + H +IVR
Sbjct: 23 DFVKDIGSGNFGVARLMRDKLTKEL-VAVKYIERGAAIDENVQREIINHRSLRHPNIVRF 81
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
T A++ E+ G L + I + S ++ + + GV Y H
Sbjct: 82 KEVILTPTHLAIIMEYASGGELYERICNAGR------FSEDEARFFFQQLLSGVSYCH-- 133
Query: 254 CNQRILHFDIKPHNILLDHNFQP--KISDFGLAK---LCSKDISIVSLTAARGTAGYIAP 308
+ +I H D+K N LLD + P KI DFG +K L S+ S V GT YIAP
Sbjct: 134 -SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV------GTPAYIAP 186
Query: 309 ELFSRN--FGEVSYKSDVYSYGMMLLEM-VGCRKNKDP 343
E+ R G++ +DV+S G+ L M VG +DP
Sbjct: 187 EVLLRQEYDGKI---ADVWSCGVTLYVMLVGAYPFEDP 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 29 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 82
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 83 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 136
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 137 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 193
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + + T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 194 LARHTDDE-----MXGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 32/224 (14%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFM-PNGSLEKFIFSKTNSSSHRPLSWE 234
EV + ++ ++RLL + L+ E M P L FI + L E
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGA------LQEE 114
Query: 235 KLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISI 293
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 115 LARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-- 169
Query: 294 VSLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 170 --YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 208
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGHRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 39/227 (17%)
Query: 128 KELKKITSKFKHRL------GQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNGQEFINE 178
+EL K + RL G G YGSV + +L VAVK L Q I+
Sbjct: 17 QELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQK--VAVKKLSR---PFQSLIHA 71
Query: 179 VATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT--------NSSSH 228
T + +RLL L+ F P S+E F ++ T N
Sbjct: 72 RRT------YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC 125
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
+ LS E ++ + + + RG++Y+H I+H D+KP N+ ++ + + +I DFGLA+
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD 182
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
++ +T T Y APE+ N+ + D++S G ++ E++
Sbjct: 183 EE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELL 223
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G VAVK L
Sbjct: 16 PTFYR-QELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTK--TGHRVAVKKLSR---PF 69
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 70 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 123
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 124 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 180
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 181 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 19/200 (9%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNG---QEFINEVATIGRIHHFHIVRLLGF 196
+G+G + V + + G VAV++++ + N Q+ EV + ++H +IV+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
LV E+ G + ++ + H + ++ + + V+Y HQ +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVA------HGRMKEKEARAKFRQIVSAVQYCHQ---K 132
Query: 257 RILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVS-LTAARGTAGYIAPELFSRNF 315
I+H D+K N+LLD + KI+DFG S + + + L G+ Y APELF
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGF----SNEFTFGNKLDEFCGSPPYAAPELFQGKK 188
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
+ + DV+S G++L +V
Sbjct: 189 YD-GPEVDVWSLGVILYTLV 207
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G VAVK L
Sbjct: 12 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGHRVAVKKLSR---PF 65
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 66 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 119
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 120 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 176
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 177 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G VAVK L
Sbjct: 2 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGHRVAVKKLSR---PF 55
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 56 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 109
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 110 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 166
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 167 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
EV+ + I H +++ L T L+ E + G L F+ K + L+ E+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEAT 117
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF-QP--KISDFGLAKLCSKDISI 293
+ + GV YLH + +I HFD+KP NI LLD N +P KI DFGLA
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
++ GT ++APE+ N+ + ++D++S G++
Sbjct: 175 KNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 44/240 (18%)
Query: 123 TRYT--YKELKKITSKFKHRLGQGGYGSVFRG-KLFNGIPVAVKMLEH-LKG--NGQEFI 176
+RYT + EL+KI G G +GSVF+ K +G A+K + L G + Q +
Sbjct: 5 SRYTTEFHELEKI--------GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNAL 56
Query: 177 NEV---ATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSW 233
EV A +G+ H H+VR +E + E+ GSL I S ++R +S+
Sbjct: 57 REVYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-----SENYRIMSY 109
Query: 234 EK---LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKIS-------DFGL 283
K LK + V RG+ Y+H + ++H DIKP NI + P + D+
Sbjct: 110 FKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWAS 166
Query: 284 AKLCSK--DIS----IVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGC 337
K+ K D+ I S G + ++A E+ N+ + K+D+++ + ++ G
Sbjct: 167 NKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLP-KADIFALALTVVCAAGA 225
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 140 RLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNG--QEFINEVATIGRIHHFHIVRLLG-F 196
++G+G YG V++ K +G L+ ++G G E+A + + H +++ L F
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 197 CSEGTRRA-LVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK--LKKIAFGVARGVEYLHQG 253
S R+ L++++ + F + + ++ +P+ + +K + + + G+ YLH
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 254 CNQRILHFDIKPHNILL----DHNFQPKISDFGLAKLCSKDI-SIVSLTAARGTAGYIAP 308
+LH D+KP NIL+ + KI+D G A+L + + + L T Y AP
Sbjct: 148 W---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 309 ELF--SRNFGEVSYKSDVYSYGMMLLEMV 335
EL +R++ + D+++ G + E++
Sbjct: 205 ELLLGARHYTKA---IDIWAIGCIFAELL 230
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 44/240 (18%)
Query: 123 TRYT--YKELKKITSKFKHRLGQGGYGSVFRG-KLFNGIPVAVKMLEH-LKG--NGQEFI 176
+RYT + EL+KI G G +GSVF+ K +G A+K + L G + Q +
Sbjct: 5 SRYTTEFHELEKI--------GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNAL 56
Query: 177 NEV---ATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSW 233
EV A +G+ H H+VR +E + E+ GSL I S ++R +S+
Sbjct: 57 REVYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-----SENYRIMSY 109
Query: 234 EK---LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKIS-------DFGL 283
K LK + V RG+ Y+H + ++H DIKP NI + P + D+
Sbjct: 110 FKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWAS 166
Query: 284 AKLCSK--DIS----IVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGC 337
K+ K D+ I S G + ++A E+ N+ + K+D+++ + ++ G
Sbjct: 167 NKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLP-KADIFALALTVVCAAGA 225
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQEFI----NEVATIGRIHHFHIVRLLG 195
LG GG V + L + VAVK+L F E ++H IV +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 196 F----CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLH 251
G +V E++ +L + ++ P++ ++ ++ + + + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSH 133
Query: 252 QGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR-GTAGYIAPEL 310
Q I+H D+KP NI++ K+ DFG+A+ + + V+ TAA GTA Y++PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 311 FSRNFGEVSYKSDVYSYGMMLLEMV 335
+ V +SDVYS G +L E++
Sbjct: 191 ARGD--SVDARSDVYSLGCVLYEVL 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
EV+ + I H +++ L T L+ E + G L F+ K + L+ E+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEAT 117
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF-QP--KISDFGLAKLCSKDISI 293
+ + GV YLH + +I HFD+KP NI LLD N +P KI DFGLA
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
++ GT ++APE+ N+ + ++D++S G++
Sbjct: 175 KNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
EV+ + I H +++ L T L+ E + G L F+ K + L+ E+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEAT 117
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF-QP--KISDFGLAKLCSKDISI 293
+ + GV YLH + +I HFD+KP NI LLD N +P KI DFGLA
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
++ GT ++APE+ N+ + ++D++S G++
Sbjct: 175 KNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G VAVK L
Sbjct: 25 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGHRVAVKKLSR---PF 78
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 79 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 132
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 133 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 189
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 190 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
EV+ + I H +++ L T L+ E + G L F+ K + L+ E+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEAT 117
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF-QP--KISDFGLAKLCSKDISI 293
+ + GV YLH + +I HFD+KP NI LLD N +P KI DFGLA
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
++ GT ++APE+ N+ + ++D++S G++
Sbjct: 175 KNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
EV+ + I H +++ L T L+ E + G L F+ K + L+ E+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEAT 117
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF-QP--KISDFGLAKLCSKDISI 293
+ + GV YLH + +I HFD+KP NI LLD N +P KI DFGLA
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
++ GT ++APE+ N+ + ++D++S G++
Sbjct: 175 KNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
EV+ + I H +++ L T L+ E + G L F+ K + L+ E+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEAT 117
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF-QP--KISDFGLAKLCSKDISI 293
+ + GV YLH + +I HFD+KP NI LLD N +P KI DFGLA
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
++ GT ++APE+ N+ + ++D++S G++
Sbjct: 175 KNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G VAVK L
Sbjct: 26 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGHRVAVKKLSR---PF 79
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 80 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 133
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 134 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 190
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 191 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
EV+ + I H +++ L T L+ E + G L F+ K + L+ E+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEAT 117
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF-QP--KISDFGLAKLCSKDISI 293
+ + GV YLH + +I HFD+KP NI LLD N +P KI DFGLA
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
++ GT ++APE+ N+ + ++D++S G++
Sbjct: 175 KNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
EV+ + I H +++ L T L+ E + G L F+ K + L+ E+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEAT 117
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF-QP--KISDFGLAKLCSKDISI 293
+ + GV YLH + +I HFD+KP NI LLD N +P KI DFGLA
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
++ GT ++APE+ N+ + ++D++S G++
Sbjct: 175 KNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 12/132 (9%)
Query: 205 LVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIK 264
+V E++ +L + ++ P++ ++ ++ + + + HQ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQNG---IIHRDVK 143
Query: 265 PHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR-GTAGYIAPELFSRNFGEVSYKSD 323
P NI++ K+ DFG+A+ + + V+ TAA GTA Y++PE + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 324 VYSYGMMLLEMV 335
VYS G +L E++
Sbjct: 202 VYSLGCVLYEVL 213
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 12/132 (9%)
Query: 205 LVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIK 264
+V E++ +L + ++ P++ ++ ++ + + + HQ I+H D+K
Sbjct: 110 IVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQNG---IIHRDVK 160
Query: 265 PHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR-GTAGYIAPELFSRNFGEVSYKSD 323
P NI++ K+ DFG+A+ + + V+ TAA GTA Y++PE + V +SD
Sbjct: 161 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 218
Query: 324 VYSYGMMLLEMV 335
VYS G +L E++
Sbjct: 219 VYSLGCVLYEVL 230
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 205 LVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIK 264
+V E++ +L + ++ P++ ++ ++ + + + HQ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQNG---IIHRDVK 143
Query: 265 PHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR-GTAGYIAPELFSRNFGEVSYKSD 323
P NIL+ K+ DFG+A+ + + V TAA GTA Y++PE + V +SD
Sbjct: 144 PANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 324 VYSYGMMLLEMV 335
VYS G +L E++
Sbjct: 202 VYSLGCVLYEVL 213
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 44/240 (18%)
Query: 123 TRYT--YKELKKITSKFKHRLGQGGYGSVFRG-KLFNGIPVAVKMLEH-LKG--NGQEFI 176
+RYT + EL+KI G G +GSVF+ K +G A+K + L G + Q +
Sbjct: 7 SRYTTEFHELEKI--------GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNAL 58
Query: 177 NEV---ATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSW 233
EV A +G+ H H+VR +E + E+ GSL I S ++R +S+
Sbjct: 59 REVYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-----SENYRIMSY 111
Query: 234 EK---LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKIS-------DFGL 283
K LK + V RG+ Y+H + ++H DIKP NI + P + D+
Sbjct: 112 FKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWAS 168
Query: 284 AKLCSK--DIS----IVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGC 337
K+ K D+ I S G + ++A E+ N+ + K+D+++ + ++ G
Sbjct: 169 NKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLP-KADIFALALTVVCAAGA 227
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
EV+ + I H +++ L T L+ E + G L F+ K + L+ E+
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEAT 116
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF-QP--KISDFGLAKLCSKDISI 293
+ + GV YLH + +I HFD+KP NI LLD N +P KI DFGLA
Sbjct: 117 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 173
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
++ GT ++APE+ N+ + ++D++S G++
Sbjct: 174 KNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 205
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 12/132 (9%)
Query: 205 LVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIK 264
+V E++ +L + ++ P++ ++ ++ + + + HQ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQNG---IIHRDVK 143
Query: 265 PHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR-GTAGYIAPELFSRNFGEVSYKSD 323
P NI++ K+ DFG+A+ + + V+ TAA GTA Y++PE + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 324 VYSYGMMLLEMV 335
VYS G +L E++
Sbjct: 202 VYSLGCVLYEVL 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
EV+ + I H +++ L T L+ E + G L F+ K + L+ E+
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEAT 116
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF-QP--KISDFGLAKLCSKDISI 293
+ + GV YLH + +I HFD+KP NI LLD N +P KI DFGLA
Sbjct: 117 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 173
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
++ GT ++APE+ N+ + ++D++S G++
Sbjct: 174 KNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 205
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQEFI----NEVATIGRIHHFHIVRLLG 195
LG GG V + L + VAVK+L F E ++H IV +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 196 F----CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLH 251
G +V E++ +L + ++ P++ ++ ++ + + + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSH 133
Query: 252 QGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR-GTAGYIAPEL 310
Q I+H D+KP NI++ K+ DFG+A+ + + V+ TAA GTA Y++PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 311 FSRNFGEVSYKSDVYSYGMMLLEMV 335
+ V +SDVYS G +L E++
Sbjct: 191 ARGD--SVDARSDVYSLGCVLYEVL 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
EV+ + I H +++ L T L+ E + G L F+ K + L+ E+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEAT 117
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF-QP--KISDFGLAKLCSKDISI 293
+ + GV YLH + +I HFD+KP NI LLD N +P KI DFGLA
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
++ GT ++APE+ N+ + ++D++S G++
Sbjct: 175 KNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
EV+ + I H +++ L T L+ E + G L F+ K + L+ E+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES------LTEEEAT 117
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF-QP--KISDFGLAKLCSKDISI 293
+ + GV YLH + +I HFD+KP NI LLD N +P KI DFGLA
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
++ GT ++APE+ N+ + ++D++S G++
Sbjct: 175 KNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 19/195 (9%)
Query: 141 LGQGGYGSVFR-GKLFNGIPVAVKMLEHLKGNGQEFI-NEVATIGRIHHFHIVRLLGFCS 198
LG G +G V R + G A K + + +E + E+ T+ + H +V L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 199 EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRI 258
+ ++YEFM G L F K + H +S ++ + V +G+ ++H+
Sbjct: 225 DDNEMVMIYEFMSGGEL----FEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNY 276
Query: 259 LHFDIKPHNILL--DHNFQPKISDFGL-AKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+H D+KP NI+ + + K+ DFGL A L K S+ GTA + APE+
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----SVKVTTGTAEFAAPEVAEGK- 331
Query: 316 GEVSYKSDVYSYGMM 330
V Y +D++S G++
Sbjct: 332 -PVGYYTDMWSVGVL 345
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 19/195 (9%)
Query: 141 LGQGGYGSVFR-GKLFNGIPVAVKMLEHLKGNGQEFI-NEVATIGRIHHFHIVRLLGFCS 198
LG G +G V R + G A K + + +E + E+ T+ + H +V L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 199 EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRI 258
+ ++YEFM G L F K + H +S ++ + V +G+ ++H+
Sbjct: 119 DDNEMVMIYEFMSGGEL----FEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNY 170
Query: 259 LHFDIKPHNILL--DHNFQPKISDFGL-AKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
+H D+KP NI+ + + K+ DFGL A L K S+ GTA + APE+
Sbjct: 171 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----SVKVTTGTAEFAAPEVAEGK- 225
Query: 316 GEVSYKSDVYSYGMM 330
V Y +D++S G++
Sbjct: 226 -PVGYYTDMWSVGVL 239
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 19/175 (10%)
Query: 161 AVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIF 220
AVK+++ K + E I + G+ H +I+ L +G +V E G L I
Sbjct: 51 AVKIIDKSKRDPTEEIEILLRYGQ--HPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL 108
Query: 221 SKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNIL-LDHNFQP--- 276
+ + S + + F + + VEYLH Q ++H D+KP NIL +D + P
Sbjct: 109 RQ------KFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESI 159
Query: 277 KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMML 331
+I DFG AK + + L TA ++APE+ R + + D++S G++L
Sbjct: 160 RICDFGFAKQLRAENGL--LXTPCYTANFVAPEVLERQGYDAA--CDIWSLGVLL 210
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 32/208 (15%)
Query: 141 LGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRI-HHFHIVRLLGFC-S 198
+G G +G VF+ KL VA+K + K F N I RI H ++V L F S
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYS 103
Query: 199 EGTRRA-----LVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
G ++ LV E++P + S+ + + + +K + + R + Y+H
Sbjct: 104 NGDKKDEVFLNLVLEYVPETV---YRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH-- 158
Query: 254 CNQRILHFDIKPHNILLDHNFQP----KISDFGLAKLCSKDISIVSLTAARGTAGYIAPE 309
+ I H DIKP N+LLD P K+ DFG AK+ VS +R Y APE
Sbjct: 159 -SIGICHRDIKPQNLLLD---PPSGVLKLIDFGSAKILIAGEPNVSXICSR---YYRAPE 211
Query: 310 LFSRNFGEVSYKS--DVYSYGMMLLEMV 335
L FG +Y + D++S G ++ E++
Sbjct: 212 LI---FGATNYTTNIDIWSTGCVMAELM 236
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 23/201 (11%)
Query: 140 RLGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHH-FHIVRLLGFC 197
+LG+G Y VF + N V VK+L+ +K N + E+ + + +I+ L
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKN--KIKREIKILENLRGGPNIITLADIV 101
Query: 198 SEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ R ALV+E + N ++ + T+ ++ + + + ++Y H +
Sbjct: 102 KDPVSRTPALVFEHVNNTDFKQLYQTLTDYD---------IRFYMYEILKALDYCH---S 149
Query: 256 QRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRN 314
I+H D+KPHN+++DH + ++ D+GLA+ A+R G PEL +
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-D 205
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
+ Y D++S G ML M+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMI 226
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 30/228 (13%)
Query: 120 VNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGK-LFNGIPVAVK--MLEHLKGNGQEFI 176
+ P Y Y+E + + + RLG+G +G V R + G AVK LE +
Sbjct: 81 LKPVDYEYRE-EVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE----- 134
Query: 177 NEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKL 236
E+ + IV L G EG + E + GSL + + + R L +
Sbjct: 135 -ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYY--- 190
Query: 237 KKIAFGVA-RGVEYLHQGCNQRILHFDIKPHNILLDHN-FQPKISDFGLAKLCSKD---I 291
G A G+EYLH ++RILH D+K N+LL + + DFG A D
Sbjct: 191 ----LGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGK 243
Query: 292 SIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV-GC 337
S+++ GT ++APE + R+ K DV+S M+L M+ GC
Sbjct: 244 SLLTGDYIPGTETHMAPEVVLGRS---CDAKVDVWSSCCMMLHMLNGC 288
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI D G
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 141 LGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNG----QEFINEVATIGRIHHFHIVRLLG 195
+G G +G+V+ + + N VA+K + + Q+ I EV + ++ H + ++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
LV E+ + + K +PL ++ + G +G+ YLH +
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHK------KPLQEVEIAAVTHGALQGLAYLH---S 133
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRN 314
++H D+K NILL K+ DFG A + + V GT ++APE + + +
Sbjct: 134 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVILAMD 187
Query: 315 FGEVSYKSDVYSYGMMLLEM 334
G+ K DV+S G+ +E+
Sbjct: 188 EGQYDGKVDVWSLGITCIEL 207
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGHRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ D + A R Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LAR--HTDDEMAGFVATR---WYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI FG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI D G
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGHRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ D + A R Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LAR--HTDDEMAGFVATR---WYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 21/201 (10%)
Query: 141 LGQGGYGSV-FRGKLFNGIPVAVKMLEHLKGNG----QEFINEVATIGRIHHFHIVRLLG 195
+G G +G+V F + N VA+K + + Q+ I EV + ++ H + ++ G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
LV E+ + + K +PL ++ + G +G+ YLH +
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHK------KPLQEVEIAAVTHGALQGLAYLH---S 172
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRN 314
++H D+K NILL K+ DFG A + + V GT ++APE + + +
Sbjct: 173 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVILAMD 226
Query: 315 FGEVSYKSDVYSYGMMLLEMV 335
G+ K DV+S G+ +E+
Sbjct: 227 EGQYDGKVDVWSLGITCIELA 247
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 105/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G VAVK L
Sbjct: 2 PTFYR-QELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGHRVAVKKLSR---PF 55
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 56 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 109
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 110 NNIVKCAKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 166
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 167 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K +G + E+ + H +I+R+
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + R L+ EF P G L K + R ++ + +A + Y H+
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------ELADALHYCHE--- 133
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR--GTAGYIAPELFSR 313
++++H DIKP N+L+ + + KI+DFG + + SL GT Y+ PE+
Sbjct: 134 RKVIHRDIKPENLLMGYKGELKIADFGWS------VHAPSLRRRXMCGTLDYLPPEMIEG 187
Query: 314 NFGEVSYKSDVYSYGMMLLE-MVGCRKNKDPA 344
+ K D++ G++ E +VG P+
Sbjct: 188 KTHDE--KVDLWCAGVLCYEFLVGMPPFDSPS 217
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFINEVATIGRIHHFH--I 190
LG GG+GSV+ G ++ + +PVA+K +E + NG EV + ++ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYL 250
+RLL + L+ E P + F F + L+ + + V V +
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA----RSFFWQVLEAVRHC 126
Query: 251 HQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE 309
H N +LH DIK NIL+D N + K+ DFG L + T GT Y PE
Sbjct: 127 H---NXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVYSPPE 179
Query: 310 L--FSRNFGEVSYKSDVYSYGMMLLEMV 335
+ R G + V+S G++L +MV
Sbjct: 180 WIRYHRYHGR---SAAVWSLGILLYDMV 204
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K +G + E+ + H +I+R+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + R L+ EF P G L K + R ++ + +A + Y H+
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------ELADALHYCHE--- 132
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR--GTAGYIAPELFSR 313
++++H DIKP N+L+ + + KI+DFG + + SL GT Y+ PE+
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWS------VHAPSLRRRXMCGTLDYLPPEMIEG 186
Query: 314 NFGEVSYKSDVYSYGMMLLE-MVGCRKNKDPA 344
+ K D++ G++ E +VG P+
Sbjct: 187 KTHDE--KVDLWCAGVLCYEFLVGMPPFDSPS 216
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 141 LGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLG 195
LG+G +G+V+ + K + V K +G + E+ + H +I+R+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
+ + R L+ EF P G L K + R ++ + +A + Y H+
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------ELADALHYCHE--- 132
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR--GTAGYIAPELFSR 313
++++H DIKP N+L+ + + KI+DFG + + SL GT Y+ PE+
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWS------VHAPSLRRRXMCGTLDYLPPEMIEG 186
Query: 314 NFGEVSYKSDVYSYGMMLLE-MVGCRKNKDPA 344
+ K D++ G++ E +VG P+
Sbjct: 187 KTHDE--KVDLWCAGVLCYEFLVGMPPFDSPS 216
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 17/166 (10%)
Query: 176 INEVATIGRIH-HFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWE 234
+ EV + ++ H +I++L T LV++ M G L ++ K LS +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT------LSEK 124
Query: 235 KLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV 294
+ +KI + + LH+ I+H D+KP NILLD + K++DFG + C D
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPG-E 178
Query: 295 SLTAARGTAGYIAPELF--SRNFGEVSY--KSDVYSYGMMLLEMVG 336
L + GT Y+APE+ S N Y + D++S G+++ ++
Sbjct: 179 KLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G VAVK L
Sbjct: 2 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGHRVAVKKLSR---PF 55
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 56 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 109
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 110 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 166
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ D + A R Y APE+ N+ + D++S G ++ E++ R
Sbjct: 167 LAR--HTDDEMAGFVATR---WYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 117
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 118 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 170
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 171 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 209
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 131
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 132 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 184
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 185 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 223
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 99/215 (46%), Gaps = 38/215 (17%)
Query: 141 LGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGR-IHHFHIVRLLGFCSE 199
LG G G+V F G PVAVK + L + E+ + H +++R +CSE
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRY--YCSE 78
Query: 200 GTRRALVYEF-MPNGSLEKFIFSKTNSSSHRPLSWEK-----LKKIAFGVARGVEYLHQG 253
T R L + N +L+ + SK S + L E L++IA GVA +LH
Sbjct: 79 TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA----HLH-- 132
Query: 254 CNQRILHFDIKPHNILLD-------------HNFQPKISDFGL-AKLCSKDISI-VSLTA 298
+ +I+H D+KP NIL+ N + ISDFGL KL S S +L
Sbjct: 133 -SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNN 191
Query: 299 ARGTAGYIAPELF--SRNFG---EVSYKSDVYSYG 328
GT+G+ APEL S N ++ D++S G
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 131
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 132 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 184
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 185 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 223
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 132
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 133 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 185
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 186 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 224
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
EV+ + I H +++ L T L+ E + G L F+ K + L+ E+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES------LTEEEAT 117
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNI-LLDHNF-QP--KISDFGLAKLCSKDISI 293
+ + GV YLH + +I HFD+KP NI LLD N +P KI DFGLA
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
++ GT ++APE+ N+ + ++D++S G++
Sbjct: 175 KNIF---GTPEFVAPEIV--NYEPLGLEADMWSIGVI 206
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 132
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 133 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 185
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 186 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 224
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G+ VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI D G
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGG 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 34/211 (16%)
Query: 141 LGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGR-IHHFHIVRLLGFCSE 199
LG G G+V F G PVAVK + L + E+ + H +++R +CSE
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRY--YCSE 96
Query: 200 GTRRALVYEF-MPNGSLEKFIFSKTNSSSHRPLSWEK-----LKKIAFGVARGVEYLHQG 253
T R L + N +L+ + SK S + L E L++IA GVA +LH
Sbjct: 97 TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA----HLH-- 150
Query: 254 CNQRILHFDIKPHNILLD-------------HNFQPKISDFGL-AKLCSKDISI-VSLTA 298
+ +I+H D+KP NIL+ N + ISDFGL KL S +L
Sbjct: 151 -SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 299 ARGTAGYIAPELFSRNFGEVSYKS-DVYSYG 328
GT+G+ APEL + +S D++S G
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMG 240
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 34/211 (16%)
Query: 141 LGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGR-IHHFHIVRLLGFCSE 199
LG G G+V F G PVAVK + L + E+ + H +++R +CSE
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRY--YCSE 96
Query: 200 GTRRALVYEF-MPNGSLEKFIFSKTNSSSHRPLSWEK-----LKKIAFGVARGVEYLHQG 253
T R L + N +L+ + SK S + L E L++IA GVA +LH
Sbjct: 97 TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA----HLH-- 150
Query: 254 CNQRILHFDIKPHNILLD-------------HNFQPKISDFGL-AKLCSKDISI-VSLTA 298
+ +I+H D+KP NIL+ N + ISDFGL KL S +L
Sbjct: 151 -SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 299 ARGTAGYIAPELFSRNFGEVSYKS-DVYSYG 328
GT+G+ APEL + +S D++S G
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMG 240
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 116
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 117 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 169
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 170 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 208
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 117
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 118 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 170
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 171 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 209
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 117
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 118 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 170
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 171 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 209
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 132
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 133 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 185
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 186 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 224
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 145
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 146 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 198
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 199 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 237
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G VAVK L
Sbjct: 26 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGHRVAVKKLSR---PF 79
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 80 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 133
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DFG
Sbjct: 134 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 190
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + + T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 191 LARHTDDE-----MXGXVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 145
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 146 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 198
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 199 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 237
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 144
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 145 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 197
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 198 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 236
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 144
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 145 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 197
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 198 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 236
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 210 MPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNIL 269
+ + SL+KF + P + L KIA + + +E+LH + ++H D+KP N+L
Sbjct: 114 LXDTSLDKFYKQVIDKGQTIPE--DILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVL 169
Query: 270 LDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSY--KSDVYSY 327
++ Q K DFG++ D V+ G Y APE + + Y KSD++S
Sbjct: 170 INALGQVKXCDFGISGYLVDD---VAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSL 226
Query: 328 GMMLLEMVGCR 338
G+ +E+ R
Sbjct: 227 GITXIELAILR 237
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 144
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 145 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 197
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 198 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 236
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 145
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 146 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 198
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 199 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 237
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 24/205 (11%)
Query: 140 RLGQGGYGSVFRGKLFN-GIPVAVKMLEHLKGNGQEFINEVA-----TIGRIHHFHIVRL 193
++G+G YG VF+ + + G VA+K L+ I ++A + ++ H ++V L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKF--LESEDDPVIKKIALREIRMLKQLKHPNLVNL 67
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
L R LV+E+ + L + + H +K I + + V + H+
Sbjct: 68 LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHL------VKSITWQTLQAVNFCHK- 120
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
+H D+KP NIL+ + K+ DFG A+L + A T Y +PEL
Sbjct: 121 --HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA--TRWYRSPELL-- 174
Query: 314 NFGEVSY--KSDVYSYGMMLLEMVG 336
G+ Y DV++ G + E++
Sbjct: 175 -VGDTQYGPPVDVWAIGCVFAELLS 198
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 144
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 145 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 197
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 198 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 236
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 145
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 146 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 198
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 199 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 237
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 159
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 160 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 212
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 213 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 251
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 159
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 160 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 212
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 213 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 251
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 32/207 (15%)
Query: 141 LGQGGYGSVFR------GKLFNGIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL 193
LG+GG+ + ++F G V ML LK + +E ++ E+A + + H+V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSML--LKPHQKEKMSTEIAIHKSLDNPHVVGF 91
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
GF + +V E SL + K + P + +++ +GV+YLH
Sbjct: 92 HGFFEDDDFVYVVLEICRRRSLLEL--HKRRKAVTEPEARYFMRQ----TIQGVQYLH-- 143
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR-----GTAGYIAP 308
N R++H D+K N+ L+ + KI DFGLA + + R GT YIAP
Sbjct: 144 -NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKDLCGTPNYIAP 195
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E+ + G S++ D++S G +L ++
Sbjct: 196 EVLCKK-GH-SFEVDIWSLGCILYTLL 220
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFINEVATIGRIHHFH--I 190
LG GG+GSV+ G ++ + +PVA+K +E + NG EV + ++ +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYL 250
+RLL + L+ E P + F F + L+ + + V V +
Sbjct: 75 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA----RSFFWQVLEAVRHC 129
Query: 251 HQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE 309
H N +LH DIK NIL+D N + K+ DFG L + T GT Y PE
Sbjct: 130 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVYSPPE 182
Query: 310 L--FSRNFGEVSYKSDVYSYGMMLLEMV 335
+ R G + V+S G++L +MV
Sbjct: 183 WIRYHRYHGR---SAAVWSLGILLYDMV 207
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L E
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGA----LQEEL 150
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 151 ARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 204
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 205 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 243
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 22/202 (10%)
Query: 141 LGQGGYGSVFR------GKLFNGIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL 193
LG+GG+ + ++F G V ML LK + +E ++ E+A + + H+V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSML--LKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
GF + +V E SL + K + P + +++ +GV+YLH
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLEL--HKRRKAVTEPEARYFMRQ----TIQGVQYLH-- 159
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
N R++H D+K N+ L+ + KI DFGLA D GT YIAPE+ +
Sbjct: 160 -NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLC--GTPNYIAPEVLCK 216
Query: 314 NFGEVSYKSDVYSYGMMLLEMV 335
G S++ D++S G +L ++
Sbjct: 217 K-GH-SFEVDIWSLGCILYTLL 236
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 176 INEVATIGRIH-HFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWE 234
+ EV + ++ H +I++L T LV++ M G L ++ K LS +
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT------LSEK 111
Query: 235 KLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV 294
+ +KI + + LH+ I+H D+KP NILLD + K++DFG + C D
Sbjct: 112 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPG-E 165
Query: 295 SLTAARGTAGYIAPELF--SRNFGEVSY--KSDVYSYGMMLLEMVG 336
L GT Y+APE+ S N Y + D++S G+++ ++
Sbjct: 166 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 22/202 (10%)
Query: 141 LGQGGYGSVFR------GKLFNGIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL 193
LG+GG+ + ++F G V ML LK + +E ++ E+A + + H+V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSML--LKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
GF + +V E SL + K + P + +++ +GV+YLH
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLEL--HKRRKAVTEPEARYFMRQ----TIQGVQYLH-- 159
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
N R++H D+K N+ L+ + KI DFGLA D GT YIAPE+ +
Sbjct: 160 -NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC--GTPNYIAPEVLCK 216
Query: 314 NFGEVSYKSDVYSYGMMLLEMV 335
G S++ D++S G +L ++
Sbjct: 217 K-GH-SFEVDIWSLGCILYTLL 236
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 83
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L+
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA--- 139
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 140 -RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 192
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 193 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 231
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 141 LGQGGYGSVFRGKLF-NGIPVAVKMLEHLKGNGQEFI-NEVATIGRIHHFHIVRLLGFCS 198
LG+G V+R K P A+K+L+ K ++ + E+ + R+ H +I++L
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLK--KTVDKKIVRTEIGVLLRLSHPNIIKLKEIFE 118
Query: 199 EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRI 258
T +LV E + G L I K S + + +K+I VA YLH+ I
Sbjct: 119 TPTEISLVLELVTGGELFDRIVEKGYYSERD--AADAVKQILEAVA----YLHENG---I 169
Query: 259 LHFDIKPHNILLDH---NFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
+H D+KP N+L + KI+DFGL+K+ + + ++ GT GY APE+
Sbjct: 170 VHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVC---GTPGYCAPEIL 222
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 32/207 (15%)
Query: 141 LGQGGYGSVFR------GKLFNGIPVAVKMLEHLKGNGQEFIN-EVATIGRIHHFHIVRL 193
LG+GG+ + ++F G V ML LK + +E ++ E+A + + H+V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSML--LKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
GF + +V E SL + K + P + +++ +GV+YLH
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLEL--HKRRKAVTEPEARYFMRQ----TIQGVQYLH-- 159
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR-----GTAGYIAP 308
N R++H D+K N+ L+ + KI DFGLA + + R GT YIAP
Sbjct: 160 -NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKDLCGTPNYIAP 211
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEMV 335
E+ + G S++ D++S G +L ++
Sbjct: 212 EVLCKK-GH-SFEVDIWSLGCILYTLL 236
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 176 INEVATIGRIH-HFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWE 234
+ EV + ++ H +I++L T LV++ M G L ++ K LS +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT------LSEK 124
Query: 235 KLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV 294
+ +KI + + LH+ I+H D+KP NILLD + K++DFG + C D
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPG-E 178
Query: 295 SLTAARGTAGYIAPELF--SRNFGEVSY--KSDVYSYGMMLLEMVG 336
L GT Y+APE+ S N Y + D++S G+++ ++
Sbjct: 179 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 120 VNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGK-LFNGIPVAVK--MLEHLKGNGQEFI 176
+ P Y Y+E + + + RLG+G +G V R + G AVK LE +
Sbjct: 62 LKPVDYEYRE-EVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE----- 115
Query: 177 NEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKL 236
E+ + IV L G EG + E + GSL + + + R L +
Sbjct: 116 -ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYY--- 171
Query: 237 KKIAFGVA-RGVEYLHQGCNQRILHFDIKPHNILLDHN-FQPKISDFGLAKLCSKD---I 291
G A G+EYLH ++RILH D+K N+LL + + DFG A D
Sbjct: 172 ----LGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGK 224
Query: 292 SIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV-GC 337
+++ GT ++APE + R+ K DV+S M+L M+ GC
Sbjct: 225 DLLTGDYIPGTETHMAPEVVLGRS---CDAKVDVWSSCCMMLHMLNGC 269
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 128 KELKKITSKFK--HRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFIN 177
KE + + S+++ LG GG+GSV+ G ++ + +PVA+K +E + NG
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 108
Query: 178 EVATIGRIHHFH--IVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
EV + ++ ++RLL + L+ E P + F F + L E
Sbjct: 109 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGA----LQEEL 163
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIV 294
+ + V V + H N +LH DIK NIL+D N + K+ DFG L +
Sbjct: 164 ARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--- 217
Query: 295 SLTAARGTAGYIAPEL--FSRNFGEVSYKSDVYSYGMMLLEMV 335
T GT Y PE + R G + V+S G++L +MV
Sbjct: 218 -YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMV 256
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 47/239 (19%)
Query: 136 KFKHRLGQGGYGSVFRG--KLFNGIPVAVKMLEHLKG--NGQEFINEVATIGRIHHFHIV 191
+ +H +G G YG V KL + K+L + + + + E+A + R++H H+V
Sbjct: 56 EIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVV 115
Query: 192 RLLGFC----SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
++L E V + + +K + L+ +K + + + GV
Sbjct: 116 KVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVY------LTELHIKTLLYNLLVGV 169
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS---------------KDIS 292
+Y+H ILH D+KP N L++ + K+ DFGLA+ D++
Sbjct: 170 KYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMN 226
Query: 293 IVS----------LTAARGTAGYIAPE--LFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 339
+V+ LT T Y APE L N+ E DV+S G + E++ K
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEA---IDVWSIGCIFAELLNMIK 282
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFINEVATIGRIHHFH--I 190
LG GG+GSV+ G ++ + +PVA+K +E + NG EV + ++ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYL 250
+RLL + L+ E P + F F + L+ + + V V +
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA----RSFFWQVLEAVRHC 126
Query: 251 HQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE 309
H N +LH DIK NIL+D N + K+ DFG L + T GT Y PE
Sbjct: 127 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVYSPPE 179
Query: 310 L--FSRNFGEVSYKSDVYSYGMMLLEMV 335
+ R G + V+S G++L +MV
Sbjct: 180 WIRYHRYHGR---SAAVWSLGILLYDMV 204
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLK-------GNGQEFINEVATIGRIHHFH--I 190
LG GG+GSV+ G ++ + +PVA+K +E + NG EV + ++ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYL 250
+RLL + L+ E P + F F + L+ + + V V +
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELA----RSFFWQVLEAVRHC 126
Query: 251 HQGCNQRILHFDIKPHNILLDHNF-QPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE 309
H N +LH DIK NIL+D N + K+ DFG L + T GT Y PE
Sbjct: 127 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVYSPPE 179
Query: 310 L--FSRNFGEVSYKSDVYSYGMMLLEMV 335
+ R G + V+S G++L +MV
Sbjct: 180 WIRYHRYHGR---SAAVWSLGILLYDMV 204
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 141 LGQGGYGSVFRGKLF-NGIPVAVKMLEHLKGNGQE---FINEVATIGRIHHF-HIVRLLG 195
+G G G V++ + G +AVK + GN +E + ++ + + H +IV+ G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRR-SGNKEENKRILMDLDVVLKSHDCPYIVQCFG 91
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
T + E M + K P+ L K+ + + + YL +
Sbjct: 92 TFITNTDVFIAMELMGTCA------EKLKKRMQGPIPERILGKMTVAIVKALYYLKE--K 143
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF---S 312
++H D+KP NILLD Q K+ DFG++ D + + G A Y+APE
Sbjct: 144 HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD---KAKDRSAGCAAYMAPERIDPPD 200
Query: 313 RNFGEVSYKSDVYSYGMMLLEMV 335
+ ++DV+S G+ L+E+
Sbjct: 201 PTKPDYDIRADVWSLGISLVELA 223
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 32/230 (13%)
Query: 122 PTRYTYKELKKITSKF--KHRLGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGN--GQEFI 176
P R Y I+S F K LG+G YG V G VA+K +E +
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 177 NEVATIGRIHHFHIVRLLGF----CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
E+ + H +I+ + E + + + L + I ++ S H
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH---- 113
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
++ + R V+ LH G N ++H D+KP N+L++ N K+ DFGLA++ + +
Sbjct: 114 ---IQYFIYQTLRAVKVLH-GSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 293 IVS--------LTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
S +T T Y APE+ + + S DV+S G +L E+
Sbjct: 168 DNSEPTGQQSGMTEXVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNGQEFI-NEVATIGRIH-HFHIVRLLGFC 197
LG+G + V L AVK++E G+ + + EV + + H +++ L+ F
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
E R LV+E M GS+ I + R + + + VA +++LH N+
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHKR------RHFNELEASVVVQDVASALDFLH---NKG 131
Query: 258 ILHFDIKPHNILLDHNFQ---PKISDFGLA---KL---CSKDISIVSLTAARGTAGYIAP 308
I H D+KP NIL +H Q KI DFGL KL CS IS L G+A Y+AP
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSP-ISTPELLTPCGSAEYMAP 190
Query: 309 EL---FSRNFGEVSYKSDVYSYGMML 331
E+ FS + D++S G++L
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 141 LGQGGYG--SVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCS 198
+G G +G + R K N + VAVK +E + + E+ + H +IVR
Sbjct: 27 IGAGNFGVARLMRDKQANEL-VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 199 EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRI 258
T A+V E+ G L F + ++ S ++ + + GV Y H ++
Sbjct: 86 TPTHLAIVMEYASGGEL----FERICNAGR--FSEDEARFFFQQLISGVSYAHA---MQV 136
Query: 259 LHFDIKPHNILLDHNFQP--KISDFGLAK---LCSKDISIVSLTAARGTAGYIAPE-LFS 312
H D+K N LLD + P KI+DFG +K L S+ S V GT YIAPE L
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV------GTPAYIAPEVLLK 190
Query: 313 RNF-GEVSYKSDVYSYGMMLLEM-VGCRKNKDP 343
+ + G+V +DV+S G+ L M VG +DP
Sbjct: 191 KEYDGKV---ADVWSCGVTLYVMLVGAYPFEDP 220
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 98/215 (45%), Gaps = 38/215 (17%)
Query: 141 LGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGR-IHHFHIVRLLGFCSE 199
LG G G+V F G PVAVK + L + E+ + H +++R +CSE
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRY--YCSE 78
Query: 200 GTRRALVYEF-MPNGSLEKFIFSKTNSSSHRPLSWEK-----LKKIAFGVARGVEYLHQG 253
T R L + N +L+ + SK S + L E L++IA GVA +LH
Sbjct: 79 TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA----HLH-- 132
Query: 254 CNQRILHFDIKPHNILLD-------------HNFQPKISDFGL-AKLCSKDISI-VSLTA 298
+ +I+H D+KP NIL+ N + ISDFGL KL S +L
Sbjct: 133 -SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 191
Query: 299 ARGTAGYIAPELF--SRNFG---EVSYKSDVYSYG 328
GT+G+ APEL S N ++ D++S G
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 132 KITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIV 191
KI+ K LG G G++ +F+ VAVK + F + + R H
Sbjct: 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVK---RILPECFSFADREVQLLRESDEHPN 79
Query: 192 RLLGFCSEGTRR-ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYL 250
+ FC+E R+ + + +L++++ K + L E + + G+ +L
Sbjct: 80 VIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAH----LGLEPITLLQ-QTTSGLAHL 134
Query: 251 HQGCNQRILHFDIKPHNILLDH-----NFQPKISDFGLA-KLCSKDISIVSLTAARGTAG 304
H + I+H D+KPHNIL+ + ISDFGL KL S + GT G
Sbjct: 135 H---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEG 191
Query: 305 YIAPELFSRNFGE-VSYKSDVYSYG 328
+IAPE+ S + E +Y D++S G
Sbjct: 192 WIAPEMLSEDCKENPTYTVDIFSAG 216
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 97/242 (40%), Gaps = 52/242 (21%)
Query: 137 FKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEFIN---------EVATIGRIHH 187
K +GQG YG V R + N A++ ++ + N IN EV + ++HH
Sbjct: 30 LKGAIGQGSYG-VVRVAIENQTR-AIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 188 FHIVRLLGFCSEGTRRALVYEFMPNG----SLEKFIFSKT-------------------- 223
+I RL + LV E G L FI T
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 224 ---NSSSH---RPLSWEKLKKIAFGVAR----GVEYLHQGCNQRILHFDIKPHNILLDHN 273
N S H L + + +K+ + R + YLH NQ I H DIKP N L N
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTN 204
Query: 274 --FQPKISDFGLAKLCSK--DISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGM 329
F+ K+ DFGL+K K + +T GT ++APE+ + K D +S G+
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
Query: 330 ML 331
+L
Sbjct: 265 LL 266
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 40/236 (16%)
Query: 122 PTRYTYKELKKITSKFKHR------LGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNG 172
PT Y +EL K + R +G G YGSV F K G VAVK L
Sbjct: 6 PTFYR-QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGHRVAVKKLSR---PF 59
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF--IFSKT------- 223
Q I+ T + +RLL L+ F P SLE+F ++ T
Sbjct: 60 QSIIHAKRT------YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 113
Query: 224 -NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG 282
N + L+ + ++ + + + RG++Y+H I+H D+KP N+ ++ + + KI DF
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFY 170
Query: 283 LAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LA+ + +T T Y APE+ N+ + D++S G ++ E++ R
Sbjct: 171 LARHTDDE-----MTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 41/231 (17%)
Query: 118 RTVNPTRYTYKELKKITSKFKHRLGQGGYGSV---FRGKLFNGIPVAVKMLEHLKGNGQE 174
+T R Y++L+ + G G YG+V G+ G VA+K L +
Sbjct: 18 KTAWEVRAVYRDLQPV--------GSGAYGAVCSAVDGR--TGAKVAIKKLY------RP 61
Query: 175 FINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFI-------FSKTNSSS 227
F +E+ + +RLL L+ F P+ +L+ F F T+
Sbjct: 62 FQSELFAK---RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGK 118
Query: 228 ---HRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLA 284
H L ++++ + + + +G+ Y+H I+H D+KP N+ ++ + + KI DFGLA
Sbjct: 119 LMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA 175
Query: 285 KLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ ++ + T Y APE+ N+ + D++S G ++ EM+
Sbjct: 176 RQADSEMXGXVV-----TRWYRAPEVIL-NWMRYTQTVDIWSVGCIMAEMI 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 32/230 (13%)
Query: 122 PTRYTYKELKKITSKF--KHRLGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGN--GQEFI 176
P R Y I+S F K LG+G YG V G VA+K +E +
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 177 NEVATIGRIHHFHIVRLLGF----CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
E+ + H +I+ + E + + + L + I ++ S H
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH---- 113
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
++ + R V+ LH G N ++H D+KP N+L++ N K+ DFGLA++ + +
Sbjct: 114 ---IQYFIYQTLRAVKVLH-GSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 293 IVS--------LTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
S +T T Y APE+ + + S DV+S G +L E+
Sbjct: 168 DNSEPTGQQSGMTEYVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 43/223 (19%)
Query: 127 YKELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGN---GQEFINEVATIG 183
Y++LK I S QG + F L GI VAVK L N + E+ +
Sbjct: 24 YQQLKPIGSG-----AQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLK 76
Query: 184 RIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF---------IFSKTNSSSHRPLSWE 234
++H +I+ LL F P +LE+F + + H L E
Sbjct: 77 CVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHE 124
Query: 235 KLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV 294
++ + + + G+++LH I+H D+KP NI++ + KI DFGLA+ S + +
Sbjct: 125 RMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMT 181
Query: 295 SLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEMV 335
R Y APE+ G + YK D++S G ++ E+V
Sbjct: 182 PYVVTR---YYRAPEVI---LG-MGYKENVDIWSVGCIMGELV 217
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 100/236 (42%), Gaps = 54/236 (22%)
Query: 137 FKHRLGQGGYGSVFRGKLFN-----GIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIV 191
KH +G+G YG V+ N I +M E L + + + E+ + R+ +I+
Sbjct: 30 IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDL-IDCKRILREITILNRLKSDYII 88
Query: 192 RLLGFCSEGTRRALVYEFMPNGSL---EKFIFSKTNSSSHRP-------LSWEKLKKIAF 241
RL +P+ L E +I + S + L+ E +K I +
Sbjct: 89 RLYDL------------IIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILY 136
Query: 242 GVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS--KDISIVS---- 295
+ G ++H+ I+H D+KP N LL+ + K+ DFGLA+ + KD +IV+
Sbjct: 137 NLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEE 193
Query: 296 --------------LTAARGTAGYIAPELFSRNFGEVSYKS-DVYSYGMMLLEMVG 336
LT+ T Y APEL E KS D++S G + E++
Sbjct: 194 NEEPGPHNKNLKKQLTSHVVTRWYRAPELIL--LQENYTKSIDIWSTGCIFAELLN 247
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 173 QEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
+E EVA + + H +IV+ E +V ++ G L F + N+
Sbjct: 68 EESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDL----FKRINAQKGVLFQ 123
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
+++ + ++++H +++ILH DIK NI L + ++ DFG+A++ + +
Sbjct: 124 EDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180
Query: 293 IVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
+ A GT Y++PE+ + KSD+++ G +L E+
Sbjct: 181 LA--RACIGTPYYLSPEICENK--PYNNKSDIWALGCVLYEL 218
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 93/236 (39%), Gaps = 65/236 (27%)
Query: 141 LGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQEF-----INEVATIGRIHHFHIVRLLG 195
LG+GG+G VF K N + ++ ++ +E + EV + ++ H IVR
Sbjct: 13 LGRGGFGVVFEAK--NKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYF- 69
Query: 196 FCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSW--------EKLKK--------- 238
N LEK K SS + + E LK
Sbjct: 70 ----------------NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIE 113
Query: 239 ---------IAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSK 289
I +A VE+LH ++ ++H D+KP NI + K+ DFGL +
Sbjct: 114 ERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ 170
Query: 290 DISIVSL----------TAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
D ++ T GT Y++PE N S+K D++S G++L E++
Sbjct: 171 DEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN--SYSHKVDIFSLGLILFELL 224
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 141 LGQGGYG--SVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCS 198
+G G +G + R K N + VAVK +E + + E+ + H +IVR
Sbjct: 26 IGSGNFGVARLMRDKQSNEL-VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 199 EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRI 258
T A+V E+ G L F + ++ S ++ + + GV Y H ++
Sbjct: 85 TPTHLAIVMEYASGGEL----FERICNAGR--FSEDEARFFFQQLISGVSYCHA---MQV 135
Query: 259 LHFDIKPHNILLDHNFQP--KISDFGLAK---LCSKDISIVSLTAARGTAGYIAPE-LFS 312
H D+K N LLD + P KI DFG +K L S+ S V GT YIAPE L
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV------GTPAYIAPEVLLK 189
Query: 313 RNF-GEVSYKSDVYSYGMMLLEM-VGCRKNKDP 343
+ + G+V +DV+S G+ L M VG +DP
Sbjct: 190 KEYDGKV---ADVWSCGVTLYVMLVGAYPFEDP 219
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 137 FKHRLGQGGYGSVFRG--------KLFNGIPVAVKMLEHLKGNGQE-FINEVATIGRIHH 187
F LGQG + +F+G + V +K+L+ N E F + + ++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 188 FHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
H+V G C G LV EF+ GSL+ ++ N + + W+ ++A +A +
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCIN---ILWK--LEVAKQLAAAM 126
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA--RGTAGY 305
+L + ++H ++ NILL K + KL ISI L + +
Sbjct: 127 HFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPW 183
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
+ PE N ++ +D +S+G L E+
Sbjct: 184 VPPECI-ENPKNLNLATDKWSFGTTLWEI 211
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 30/227 (13%)
Query: 118 RTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGN---GQ 173
+ VN T + EL K H +G G YGSV +G VA+K L + +
Sbjct: 13 QDVNKTAW---ELPKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAK 68
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEF---MP--NGSLEKFIFSKTNSSSH 228
E+ + + H +++ LL + + Y+F MP L+K + K
Sbjct: 69 RAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK------ 122
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
S EK++ + + + +G++Y+H ++H D+KP N+ ++ + + KI DFGLA+
Sbjct: 123 --FSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHAD 177
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ +T T Y APE+ ++ + D++S G ++ EM+
Sbjct: 178 AE-----MTGYVVTRWYRAPEVI-LSWMHYNQTVDIWSVGCIMAEML 218
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 26/225 (11%)
Query: 118 RTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGN---GQ 173
+ VN T + EL K H +G G YGSV +G VA+K L + +
Sbjct: 31 QDVNKTAW---ELPKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAK 86
Query: 174 EFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEF---MPNGSLEKFIFSKTNSSSHRP 230
E+ + + H +++ LL + + Y+F MP F+ +
Sbjct: 87 RAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP------FMQTDLQKIMGME 140
Query: 231 LSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD 290
S EK++ + + + +G++Y+H ++H D+KP N+ ++ + + KI DFGLA+ +
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAE 197
Query: 291 ISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+T T Y APE+ ++ + D++S G ++ EM+
Sbjct: 198 -----MTGYVVTRWYRAPEVI-LSWMHYNQTVDIWSVGCIMAEML 236
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 29/213 (13%)
Query: 141 LGQGGYG--SVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCS 198
+G G +G + R K N + VAVK +E + E+ + H +IVR
Sbjct: 27 IGSGNFGVARLMRDKQSNEL-VAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 199 EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRI 258
T A+V E+ G L F + ++ S ++ + + GV Y H ++
Sbjct: 86 TPTHLAIVMEYASGGEL----FERICNAGR--FSEDEARFFFQQLISGVSYCHA---MQV 136
Query: 259 LHFDIKPHNILLDHNFQP--KISDFGLAK---LCSKDISIVSLTAARGTAGYIAPE-LFS 312
H D+K N LLD + P KI DFG +K L S+ S V GT YIAPE L
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV------GTPAYIAPEVLLK 190
Query: 313 RNF-GEVSYKSDVYSYGMMLLEM-VGCRKNKDP 343
+ + G+V +DV+S G+ L M VG +DP
Sbjct: 191 KEYDGKV---ADVWSCGVTLYVMLVGAYPFEDP 220
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 137 FKHRLGQGGYGSVFRG--------KLFNGIPVAVKMLEHLKGNGQE-FINEVATIGRIHH 187
F LGQG + +F+G + V +K+L+ N E F + + ++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 188 FHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
H+V G C G LV EF+ GSL+ ++ N + + W+ ++A +A +
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCIN---ILWK--LEVAKQLAWAM 126
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA--RGTAGY 305
+L + ++H ++ NILL K + KL ISI L + +
Sbjct: 127 HFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPW 183
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
+ PE N ++ +D +S+G L E+
Sbjct: 184 VPPECI-ENPKNLNLATDKWSFGTTLWEI 211
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 40/224 (17%)
Query: 127 YKELKKITSKFKHRLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGN---GQEFINEVATIG 183
Y++LK I S QG + F L GI VAVK L N + E+ +
Sbjct: 26 YQQLKPIGSG-----AQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLK 78
Query: 184 RIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF---------IFSKTNSSSHRPLSWE 234
++H +I+ LL F P +LE+F + + H L E
Sbjct: 79 CVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHE 126
Query: 235 KLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIV 294
++ + + + G+++LH I+H D+KP NI++ + KI DFGLA+ + +
Sbjct: 127 RMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMT 183
Query: 295 SLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV-GC 337
R Y APE+ G + D++S G ++ E+V GC
Sbjct: 184 PYVVTR---YYRAPEVI-LGMGYAA-NVDIWSVGCIMGELVKGC 222
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 59/244 (24%)
Query: 136 KFKHRLGQGGYGSVFRGKLFNGIP-VAVK----MLEHLKGNGQEFINEVATIGRIHHFHI 190
+ KH +G+G YG V+ N VA+K M E L + + + E+ + R+ +I
Sbjct: 31 EIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDL-IDCKRILREITILNRLKSDYI 89
Query: 191 VRLLGFCSEGTRRALVYEFMPNGSL---EKFIFSKTNSSSHRPL-------SWEKLKKIA 240
+RL +P L E +I + S + L + + +K I
Sbjct: 90 IRLHDL------------IIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTIL 137
Query: 241 FGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS--KDISIVS--- 295
+ + G +++H+ I+H D+KP N LL+ + KI DFGLA+ + KDI IV+
Sbjct: 138 YNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLE 194
Query: 296 ------------------LTAARGTAGYIAPE--LFSRNFGEVSYKSDVYSYGMMLLEMV 335
LT+ T Y APE L N+ + D++S G + E++
Sbjct: 195 EKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENY---TNSIDIWSTGCIFAELL 251
Query: 336 GCRK 339
K
Sbjct: 252 NMMK 255
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 142 GQGGYGSVFRGK-LFNGIPVAVK-MLEHLKGNGQEFINEVATIGRIHHFHIVRLLGF--- 196
GQG +G+V GK G+ VA+K +++ + +E + + + +HH +IV+L +
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNIVQLQSYFYT 90
Query: 197 CSEGTRRAL----VYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
E RR + V E++P+ +L + + P +K F + R + LH
Sbjct: 91 LGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPIL--IKVFLFQLIRSIGCLHL 147
Query: 253 GCNQRILHFDIKPHNILLDH-NFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF 311
+ + H DIKPHN+L++ + K+ DFG AK S V+ +R Y APEL
Sbjct: 148 P-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSR---YYRAPELI 203
Query: 312 SRNFGEVSYKS--DVYSYGMMLLEMV 335
FG Y + D++S G + EM+
Sbjct: 204 ---FGNQHYTTAVDIWSVGCIFAEMM 226
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNGQEFI-NEVATIGRIH-HFHIVRLLGFC 197
LG+G + V L AVK++E G+ + + EV + + H +++ L+ F
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 198 SEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQR 257
E R LV+E M GS+ I + R + + + VA +++LH N+
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHKR------RHFNELEASVVVQDVASALDFLH---NKG 131
Query: 258 ILHFDIKPHNILLDHNFQ---PKISDFGLA---KL---CSKDISIVSLTAARGTAGYIAP 308
I H D+KP NIL +H Q KI DF L KL CS IS L G+A Y+AP
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP-ISTPELLTPCGSAEYMAP 190
Query: 309 EL---FSRNFGEVSYKSDVYSYGMML 331
E+ FS + D++S G++L
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 32/230 (13%)
Query: 122 PTRYTYKELKKITSKF--KHRLGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGN--GQEFI 176
P R Y I+S F K LG+G YG V G VA+K +E +
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 177 NEVATIGRIHHFHIVRLLGF----CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLS 232
E+ + H +I+ + E + + + L + I ++ S H
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH---- 113
Query: 233 WEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDIS 292
++ + R V+ LH G N ++H D+KP N+L++ N K+ DFGLA++ + +
Sbjct: 114 ---IQYFIYQTLRAVKVLH-GSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 293 IVSLTAAR--------GTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEM 334
S + T Y APE+ + + S DV+S G +L E+
Sbjct: 168 DNSEPTGQQSGMVEFVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 30/210 (14%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNGQEFIN-------EVATIGRI----HHF 188
LG+GG+G+VF G +L + + VA+K++ + G ++ EVA + ++ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 189 HIVRLLGFCSEGTRRALVYE-FMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFG-VARG 246
++RLL + LV E +P L +I K PL E + FG V
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG------PLG-EGPSRCFFGQVVAA 151
Query: 247 VEYLHQGCNQRILHFDIKPHNILLD-HNFQPKISDFGLAKLCSKDISIVSLTAARGTAGY 305
+++ H ++ ++H DIK NIL+D K+ DFG L + T GT Y
Sbjct: 152 IQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE----PYTDFDGTRVY 204
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PE SR+ + + V+S G++L +MV
Sbjct: 205 SPPEWISRHQYH-ALPATVWSLGILLYDMV 233
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 35/243 (14%)
Query: 116 DYRTVNPTRYTYKELKKIT-SKFKHR-----------LGQGGYGSVFRGK-LFNGIPVAV 162
D+R+ +P+ + E +++ +K KHR LG+G +G V K G A+
Sbjct: 122 DFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAM 181
Query: 163 KMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK 222
K+L+ +E I VA H R+L AL Y F + L F+
Sbjct: 182 KILK------KEVI--VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRL-CFVMEY 232
Query: 223 TNS-------SSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQ 275
N S R S ++ + + ++YLH N +++ D+K N++LD +
Sbjct: 233 ANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGH 290
Query: 276 PKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
KI+DFGL K KD + ++ GT Y+APE+ N + D + G+++ EM+
Sbjct: 291 IKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 346
Query: 336 GCR 338
R
Sbjct: 347 CGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 35/243 (14%)
Query: 116 DYRTVNPTRYTYKELKKIT-SKFKHR-----------LGQGGYGSVFRGK-LFNGIPVAV 162
D+R+ +P+ + E +++ +K KHR LG+G +G V K G A+
Sbjct: 119 DFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAM 178
Query: 163 KMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSK 222
K+L+ +E I VA H R+L AL Y F + L F+
Sbjct: 179 KILK------KEVI--VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRL-CFVMEY 229
Query: 223 TNS-------SSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQ 275
N S R S ++ + + ++YLH N +++ D+K N++LD +
Sbjct: 230 ANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGH 287
Query: 276 PKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
KI+DFGL K KD + ++ GT Y+APE+ N + D + G+++ EM+
Sbjct: 288 IKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMM 343
Query: 336 GCR 338
R
Sbjct: 344 CGR 346
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 28/204 (13%)
Query: 141 LGQGGYGSVF--RGKLFNGIPVAVKML--EHLKGNGQE--FINEVATIGRIHHFHIVRLL 194
LG+G +G+V+ R K + I VA+K+L ++ G E E+ +HH +I+RL
Sbjct: 31 LGKGKFGNVYLAREKKSHFI-VALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLY 89
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
+ + R L+ E+ P G L K + R + I +A + Y H
Sbjct: 90 NYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTAT------IMEELADALMYCH--- 140
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR--GTAGYIAPELFS 312
++++H DIKP N+LL + KI+DFG + + SL GT Y+ PE+
Sbjct: 141 GKKVIHRDIKPENLLLGLKGELKIADFGWS------VHAPSLRRKTMCGTLDYLPPEMIE 194
Query: 313 -RNFGEVSYKSDVYSYGMMLLEMV 335
R E K D++ G++ E++
Sbjct: 195 GRMHNE---KVDLWCIGVLCYELL 215
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 42/224 (18%)
Query: 140 RLGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGN---GQEFINEVATIGRIH-HFHIVRLL 194
+LG+G YG V++ G VAVK + N Q E+ + + H +IV LL
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 195 GFCSEGTRRA--LVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
R LV+++M L I + H+ + + + + + ++YLH
Sbjct: 76 NVLRADNDRDVYLVFDYM-ETDLHAVIRANILEPVHK-------QYVVYQLIKVIKYLHS 127
Query: 253 GCNQRILHFDIKPHNILLDHNFQPKISDFGLA------KLCSKDISIV------------ 294
G +LH D+KP NILL+ K++DFGL+ + + +I +
Sbjct: 128 GG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 295 -SLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEMV 335
LT T Y APE+ G Y D++S G +L E++
Sbjct: 185 PILTDYVATRWYRAPEIL---LGSTKYTKGIDMWSLGCILGEIL 225
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 11/91 (12%)
Query: 243 VARGVEYLHQGCNQRILHFDIKPHNILLDHNF---QPKISDFGLAKLCSKDISIVSLTAA 299
+ GV YLHQ I+H D+KP NILL + KI DFG+++ K L
Sbjct: 140 ILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR---KIGHACELREI 193
Query: 300 RGTAGYIAPELFSRNFGEVSYKSDVYSYGMM 330
GT Y+APE+ N+ ++ +D+++ G++
Sbjct: 194 MGTPEYLAPEIL--NYDPITTATDMWNIGII 222
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 29/211 (13%)
Query: 136 KFKHRLGQGGYGSVFRGKL-FNGIPVAVKMLEH---LKGNGQEFI---NEVATIGRIHHF 188
+F LG+G +G V ++ G AVK+L+ L+ + E + ++ R H F
Sbjct: 26 EFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPF 85
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+ +L R V EF+ G L +F S R + + A + +
Sbjct: 86 -LTQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKS---RRFDEARARFYAAEIISALM 138
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK--LCSKDISIVSLTAARGTAGYI 306
+LH ++ I++ D+K N+LLDH K++DFG+ K +C+ V+ GT YI
Sbjct: 139 FLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG----VTTATFCGTPDYI 191
Query: 307 APELFSRNFGEVSYKS--DVYSYGMMLLEMV 335
APE+ E+ Y D ++ G++L EM+
Sbjct: 192 APEILQ----EMLYGPAVDWWAMGVLLYEML 218
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 101/232 (43%), Gaps = 38/232 (16%)
Query: 117 YRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFR------GKLFNGIPVAVKM-LEHLK 169
Y P + + ++++ RLG G YG VF+ G+L+ AVK + +
Sbjct: 46 YDPSRPESFFQQSFQRLS-----RLGHGSYGEVFKVRSKEDGRLY-----AVKRSMSPFR 95
Query: 170 G--NGQEFINEVATIGRI-HHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSS 226
G + + EV + ++ H VRL EG L E SL++ +S
Sbjct: 96 GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHC-EAWGAS 153
Query: 227 SHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFG-LAK 285
W L+ +A +LH +Q ++H D+KP NI L + K+ DFG L +
Sbjct: 154 LPEAQVWGYLRDTLLALA----HLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVE 206
Query: 286 LCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGC 337
L + V G Y+APEL ++G +DV+S G+ +LE V C
Sbjct: 207 LGTAGAGEVQ----EGDPRYMAPELLQGSYGTA---ADVFSLGLTILE-VAC 250
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 97/213 (45%), Gaps = 29/213 (13%)
Query: 141 LGQGGYG--SVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCS 198
+G G +G + R K N + VAVK +E + + E+ + H +IVR
Sbjct: 27 IGSGNFGVARLMRDKQSNEL-VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 199 EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRI 258
T A+V E+ G L F + ++ S ++ + + GV Y H ++
Sbjct: 86 TPTHLAIVMEYASGGEL----FERICNAGR--FSEDEARFFFQQLISGVSYCHA---MQV 136
Query: 259 LHFDIKPHNILLDHNFQP--KISDFGLAK---LCSKDISIVSLTAARGTAGYIAPE-LFS 312
H D+K N LLD + P KI FG +K L S+ S V GT YIAPE L
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV------GTPAYIAPEVLLK 190
Query: 313 RNF-GEVSYKSDVYSYGMMLLEM-VGCRKNKDP 343
+ + G+V +DV+S G+ L M VG +DP
Sbjct: 191 KEYDGKV---ADVWSCGVTLYVMLVGAYPFEDP 220
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + +G G +G V
Sbjct: 8 KGXEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----IGTGSFGRVMLV 60
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E+MP G + FS S + A + EYLH + +++ D+KP N
Sbjct: 121 EYMPGGDM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+L+D K++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 172 LLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 223
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 224 LGVLIYEMAA 233
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + +G G +G V
Sbjct: 8 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----IGTGSFGRVMLV 60
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E+MP G + FS S + A + EYLH + +++ D+KP N
Sbjct: 121 EYMPGGDM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+L+D K++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 172 LLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 223
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 224 LGVLIYEMAA 233
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 259 LHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS---RNF 315
+H DIKP N+LLD N +++DFG + L D V + A GT YI+PE+
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 271
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
G+ + D +S G+ + EM+
Sbjct: 272 GKYGPECDWWSLGVCMYEML 291
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 259 LHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS---RNF 315
+H DIKP N+LLD N +++DFG + L D V + A GT YI+PE+
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 255
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
G+ + D +S G+ + EM+
Sbjct: 256 GKYGPECDWWSLGVCMYEML 275
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 226 SSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK 285
S R + E+ + + +EYLH ++ +++ DIK N++LD + KI+DFG
Sbjct: 97 SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFG--- 150
Query: 286 LCSKDISI-VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LC + IS ++ GT Y+APE+ N + D + G+++ EM+ R
Sbjct: 151 LCKEGISDGATMKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
+IV+LL + + +L++E++ N K ++ R +E LK
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELLK--------A 138
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGY 305
++Y H +Q I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 139 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG- 194
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL + + Y D++S G M M+
Sbjct: 195 --PELLV-DLQDYDYSLDMWSLGCMFAGMI 221
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 226 SSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK 285
S R + E+ + + +EYLH ++ +++ DIK N++LD + KI+DFG
Sbjct: 100 SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFG--- 153
Query: 286 LCSKDISI-VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LC + IS ++ GT Y+APE+ N + D + G+++ EM+ R
Sbjct: 154 LCKEGISDGATMKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 205
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
+IV+LL + + +L++E++ N K ++ R +E LK
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELLK--------A 139
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGY 305
++Y H +Q I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 140 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG- 195
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL + + Y D++S G M M+
Sbjct: 196 --PELLV-DLQDYDYSLDMWSLGCMFAGMI 222
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
+IV+LL + + +L++E++ N K ++ R +E LK
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELLK--------A 137
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGY 305
++Y H +Q I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG- 193
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL + + Y D++S G M M+
Sbjct: 194 --PELLV-DLQDYDYSLDMWSLGCMFAGMI 220
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
+IV+LL + + +L++E++ N K ++ R +E LK
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELLK--------A 137
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGY 305
++Y H +Q I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG- 193
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL + + Y D++S G M M+
Sbjct: 194 --PELLV-DLQDYDYSLDMWSLGCMFAGMI 220
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
+IV+LL + + +L++E++ N K ++ R +E LK
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELLK--------A 137
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGY 305
++Y H +Q I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG- 193
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL + + Y D++S G M M+
Sbjct: 194 --PELLV-DLQDYDYSLDMWSLGCMFAGMI 220
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
+IV+LL + + +L++E++ N K ++ R +E LK
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELLK--------A 137
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGY 305
++Y H +Q I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG- 193
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL + + Y D++S G M M+
Sbjct: 194 --PELLV-DLQDYDYSLDMWSLGCMFAGMI 220
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 226 SSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK 285
S R S ++ + + ++YLH N +++ D+K N++LD + KI+DFGL K
Sbjct: 101 SRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK 158
Query: 286 LCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
KD + + GT Y+APE+ N + D + G+++ EM+ R
Sbjct: 159 EGIKDGATMKXFC--GTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
+IV+LL + + +L++E++ N K ++ R +E LK
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELLK--------A 158
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGY 305
++Y H +Q I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 159 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG- 214
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL + + Y D++S G M M+
Sbjct: 215 --PELLV-DLQDYDYSLDMWSLGCMFAGMI 241
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
+IV+LL + + +L++E++ N K ++ R +E LK
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELLK--------A 137
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGY 305
++Y H +Q I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG- 193
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL + + Y D++S G M M+
Sbjct: 194 --PELLV-DLQDYDYSLDMWSLGCMFAGMI 220
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 226 SSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK 285
S R + E+ + + +EYLH ++ +++ DIK N++LD + KI+DFG
Sbjct: 97 SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFG--- 150
Query: 286 LCSKDISI-VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LC + IS ++ GT Y+APE+ N + D + G+++ EM+ R
Sbjct: 151 LCKEGISDGATMKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
+IV+LL + + +L++E++ N K ++ R +E LK
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELLK--------A 138
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGY 305
++Y H +Q I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 139 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG- 194
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL + + Y D++S G M M+
Sbjct: 195 --PELLV-DLQDYDYSLDMWSLGCMFAGMI 221
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 33/228 (14%)
Query: 129 ELKKITSKFKHRLGQGGYGSVFRGK-LFNGIPVAVK-MLEHLKGNGQEFINEVATIGRIH 186
EL ++ + + L +GG+ V+ + + +G A+K +L + + + I EV + ++
Sbjct: 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS 83
Query: 187 -HFHIVRLLGFCSE----------GTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEK 235
H +IV+ FCS G L+ + G L +F+ S PLS +
Sbjct: 84 GHPNIVQ---FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFL---KKMESRGPLSCDT 137
Query: 236 LKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS------- 288
+ KI + R V+++H+ I+H D+K N+LL + K+ DFG A S
Sbjct: 138 VLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSW 196
Query: 289 --KDISIVSLTAARGTAG-YIAPELFS--RNFGEVSYKSDVYSYGMML 331
+ ++V R T Y PE+ NF + K D+++ G +L
Sbjct: 197 SAQRRALVEEEITRNTTPMYRTPEIIDLYSNF-PIGEKQDIWALGCIL 243
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 226 SSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK 285
S R S ++ + + ++YLH N +++ D+K N++LD + KI+DFGL K
Sbjct: 100 SRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK 157
Query: 286 LCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
KD + + GT Y+APE+ N + D + G+++ EM+ R
Sbjct: 158 EGIKDGATMKXFC--GTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 226 SSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK 285
S R + E+ + + +EYLH ++ +++ DIK N++LD + KI+DFG
Sbjct: 97 SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFG--- 150
Query: 286 LCSKDISI-VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LC + IS ++ GT Y+APE+ N + D + G+++ EM+ R
Sbjct: 151 LCKEGISDGATMKXFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
+IV+LL + + +L++E++ N K ++ R +E LK
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELLK--------A 137
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGY 305
++Y H +Q I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG- 193
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL + + Y D++S G M M+
Sbjct: 194 --PELLV-DLQDYDYSLDMWSLGCMFAGMI 220
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 141 LGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNG------------QEFINEVATIGRIHHF 188
+ G YG+V G GIPVA+K + + +G + + E+ + HH
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+I+ L A+ ++ L + ++ +S + ++ + + G+
Sbjct: 90 NILGLRDIFVHFEEPAM-HKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
LH+ ++H D+ P NILL N I DF LA+ + D + R Y AP
Sbjct: 149 VLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR---WYRAP 202
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEM 334
EL + F + D++S G ++ EM
Sbjct: 203 ELVMQ-FKGFTKLVDMWSAGCVMAEM 227
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 141 LGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNG------------QEFINEVATIGRIHHF 188
+ G YG+V G GIPVA+K + + +G + + E+ + HH
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 189 HIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVE 248
+I+ L A+ ++ L + ++ +S + ++ + + G+
Sbjct: 90 NILGLRDIFVHFEEPAM-HKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 249 YLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAP 308
LH+ ++H D+ P NILL N I DF LA+ + D + R Y AP
Sbjct: 149 VLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR---WYRAP 202
Query: 309 ELFSRNFGEVSYKSDVYSYGMMLLEM 334
EL + F + D++S G ++ EM
Sbjct: 203 ELVMQ-FKGFTKLVDMWSAGCVMAEM 227
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 226 SSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK 285
S R + E+ + + +EYLH ++ +++ DIK N++LD + KI+DFG
Sbjct: 102 SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFG--- 155
Query: 286 LCSKDISI-VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LC + IS ++ GT Y+APE+ N + D + G+++ EM+ R
Sbjct: 156 LCKEGISDGATMKXFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 141 LGQGGYGSVFRGKLFNGIPV-AVKMLEHLKGNGQEFINEVATIGRI-----HHFHIVRLL 194
+G+G Y V +L + A+K+++ N E I+ V T + +H +V L
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
+R V E++ G L +F + R L E + + ++ + YLH+
Sbjct: 88 SCFQTESRLFFVIEYVNGGDL---MF---HMQRQRKLPEEHARFYSAEISLALNYLHE-- 139
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF-SR 313
+ I++ D+K N+LLD K++D+G+ K + S GT YIAPE+
Sbjct: 140 -RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GTPNYIAPEILRGE 196
Query: 314 NFGEVSYKSDVYSYGMMLLEMVGCRKNKD 342
++G + D ++ G+++ EM+ R D
Sbjct: 197 DYG---FSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 226 SSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK 285
S R S ++ + + ++YLH N +++ D+K N++LD + KI+DFGL K
Sbjct: 102 SRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK 159
Query: 286 LCSKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
KD + + GT Y+APE+ N + D + G+++ EM+ R
Sbjct: 160 EGIKDGATMKXFC--GTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 208
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 226 SSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK 285
S R + E+ + + +EYLH ++ +++ DIK N++LD + KI+DFG
Sbjct: 97 SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFG--- 150
Query: 286 LCSKDISI-VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LC + IS ++ GT Y+APE+ N + D + G+++ EM+ R
Sbjct: 151 LCKEGISDGATMKXFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 226 SSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAK 285
S R + E+ + + +EYLH ++ +++ DIK N++LD + KI+DFG
Sbjct: 97 SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFG--- 150
Query: 286 LCSKDISI-VSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCR 338
LC + IS ++ GT Y+APE+ N + D + G+++ EM+ R
Sbjct: 151 LCKEGISDGATMKXFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 8 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 60
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E+ P G + FS S + A + EYLH + +++ D+KP N
Sbjct: 121 EYAPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+++D K++DFGLAK + GT Y+APE + S+ + + D ++
Sbjct: 172 LMIDQQGYIKVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 223
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 224 LGVLIYEMAA 233
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 15/107 (14%)
Query: 239 IAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKD---ISIVS 295
I +A VE+LH ++ ++H D+KP NI + K+ DFGL +D ++++
Sbjct: 169 IFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 296 LTAAR-------GTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
A GT Y++PE N S+K D++S G++L E++
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGN--NYSHKVDIFSLGLILFELL 270
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 141 LGQGGYG--SVFRGKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHHFHIVRLLGFCS 198
+G G +G + R K N + VAVK +E + + E+ + H +IVR
Sbjct: 27 IGSGNFGVARLMRDKQSNEL-VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 199 EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRI 258
T A+V E+ G L F + ++ S ++ + + GV Y H ++
Sbjct: 86 TPTHLAIVMEYASGGEL----FERICNAGR--FSEDEARFFFQQLISGVSYCHA---MQV 136
Query: 259 LHFDIKPHNILLDHNFQP--KISDFGLAK---LCSKDISIVSLTAARGTAGYIAPE-LFS 312
H D+K N LLD + P KI FG +K L S+ V GT YIAPE L
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV------GTPAYIAPEVLLK 190
Query: 313 RNF-GEVSYKSDVYSYGMMLLEM-VGCRKNKDP 343
+ + G+V +DV+S G+ L M VG +DP
Sbjct: 191 KEYDGKV---ADVWSCGVTLYVMLVGAYPFEDP 220
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 190 IVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
I++L+ + + ALV+E++ N ++ ++ R +E LK + + ++G
Sbjct: 100 IIKLIDTVKDPVSKTPALVFEYINNTDFKQ-LYQILTDFDIRFYMYELLKALDYCHSKG- 157
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYI 306
I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 158 ----------IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG-- 205
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 339
PEL ++ Y D++S G ML M+ R+
Sbjct: 206 -PELLV-DYQMYDYSLDMWSLGCMLASMIFRRE 236
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 19/154 (12%)
Query: 189 HIVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
+I++L+ + + ALV+E++ N ++ ++ R +E LK + + ++G
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQ-LYQILTDFDIRFYMYELLKALDYCHSKG 152
Query: 247 VEYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGY 305
I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 153 -----------IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG- 200
Query: 306 IAPELFSRNFGEVSYKSDVYSYGMMLLEMVGCRK 339
PEL ++ Y D++S G ML M+ R+
Sbjct: 201 --PELLV-DYQMYDYSLDMWSLGCMLASMIFRRE 231
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 141 LGQGGYGSVFRGKLFNGIPV-AVKMLEHLKGNGQEFINEVATIGRI-----HHFHIVRLL 194
+G+G Y V +L + A+K+++ N E I+ V T + +H +V L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
+R V E++ G L + R L E + + ++ + YLH+
Sbjct: 73 SCFQTESRLFFVIEYVNGGDL------MFHMQRQRKLPEEHARFYSAEISLALNYLHE-- 124
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF-SR 313
+ I++ D+K N+LLD K++D+G+ K + S GT YIAPE+
Sbjct: 125 -RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GTPNYIAPEILRGE 181
Query: 314 NFGEVSYKSDVYSYGMMLLEMVGCRKNKD 342
++G + D ++ G+++ EM+ R D
Sbjct: 182 DYG---FSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 35/208 (16%)
Query: 138 KHRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNGQEF--INEVATIGR-IHHFHIVRL 193
K LG+G + V R G+ A K++ K + ++F + A I R + H +IVRL
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFI----FSKTNSSSHRPLSWEKLKKIAFGVARGVEY 249
E + LV++ + G L + I F +SH + L+ IA+ + G
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH--CIQQILESIAYCHSNG--- 125
Query: 250 LHQGCNQRILHFDIKPHNILLDHNFQ---PKISDFGLAKLCSKDISIVSLTAAR---GTA 303
I+H ++KP N+LL + K++DFGLA I + A GT
Sbjct: 126 --------IVHRNLKPENLLLASKAKGAAVKLADFGLA------IEVNDSEAWHGFAGTP 171
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMML 331
GY++PE+ ++ S D+++ G++L
Sbjct: 172 GYLSPEVLKKD--PYSKPVDIWACGVIL 197
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 42/218 (19%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVK--MLEHLK-GNGQEFINEVATIGRIHHFHIVRLLG 195
++GQG +G VF+ + G VA+K ++E+ K G + E+ + + H ++V L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 196 FCSEGTRRA--------LVYEF-------MPNGSLEKFIFSKTNSSSHRPLSWEKLKKIA 240
C LV++F + + L KF S+ +K++
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE-------------IKRVM 131
Query: 241 FGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS--KDISIVSLTA 298
+ G+ Y+H+ +ILH D+K N+L+ + K++DFGLA+ S K+
Sbjct: 132 QMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 299 ARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEM 334
T Y PEL GE Y D++ G ++ EM
Sbjct: 189 RVVTLWYRPPELL---LGERDYGPPIDLWGAGCIMAEM 223
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 35/208 (16%)
Query: 138 KHRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNGQEF--INEVATIGR-IHHFHIVRL 193
K LG+G + V R G+ A K++ K + ++F + A I R + H +IVRL
Sbjct: 10 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 69
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFI----FSKTNSSSHRPLSWEKLKKIAFGVARGVEY 249
E + LV++ + G L + I F +SH + L+ IA+ + G
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH--CIQQILESIAYCHSNG--- 124
Query: 250 LHQGCNQRILHFDIKPHNILLDHNFQ---PKISDFGLAKLCSKDISIVSLTAAR---GTA 303
I+H ++KP N+LL + K++DFGLA I + A GT
Sbjct: 125 --------IVHRNLKPENLLLASKAKGAAVKLADFGLA------IEVNDSEAWHGFAGTP 170
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMML 331
GY++PE+ ++ S D+++ G++L
Sbjct: 171 GYLSPEVLKKD--PYSKPVDIWACGVIL 196
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 141 LGQGGYGSVFRGKLFNGIPV-AVKMLEHLKGNGQEFINEVATIGRI-----HHFHIVRLL 194
+G+G Y V +L + A+K+++ N E I+ V T + +H +V L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
+R V E++ G L + R L E + + ++ + YLH+
Sbjct: 77 SCFQTESRLFFVIEYVNGGDL------MFHMQRQRKLPEEHARFYSAEISLALNYLHE-- 128
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF-SR 313
+ I++ D+K N+LLD K++D+G+ K + S GT YIAPE+
Sbjct: 129 -RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GTPNYIAPEILRGE 185
Query: 314 NFGEVSYKSDVYSYGMMLLEMVGCRKNKD 342
++G + D ++ G+++ EM+ R D
Sbjct: 186 DYG---FSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 177 NEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKL 236
E+ + +++H I+++ F + +V E M G L F K ++ L
Sbjct: 64 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGEL----FDKV--VGNKRLKEATC 116
Query: 237 KKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQP---KISDFGLAKLCSKDISI 293
K + + V+YLH+ I+H D+KP N+LL + KI+DFG +K+ + +
Sbjct: 117 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLL 332
+L GT Y+APE+ + G Y D +S G++L
Sbjct: 174 RTLC---GTPTYLAPEVLV-SVGTAGYNRAVDCWSLGVILF 210
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 177 NEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKL 236
E+ + +++H I+++ F + +V E M G L F K ++ L
Sbjct: 64 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGEL----FDKV--VGNKRLKEATC 116
Query: 237 KKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQP---KISDFGLAKLCSKDISI 293
K + + V+YLH+ I+H D+KP N+LL + KI+DFG +K+ + +
Sbjct: 117 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLL 332
+L GT Y+APE+ + G Y D +S G++L
Sbjct: 174 RTLC---GTPTYLAPEVLV-SVGTAGYNRAVDCWSLGVILF 210
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 177 NEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKL 236
E+ + +++H I+++ F + +V E M G L F K ++ L
Sbjct: 64 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGEL----FDKV--VGNKRLKEATC 116
Query: 237 KKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQP---KISDFGLAKLCSKDISI 293
K + + V+YLH+ I+H D+KP N+LL + KI+DFG +K+ + +
Sbjct: 117 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLL 332
+L GT Y+APE+ + G Y D +S G++L
Sbjct: 174 RTLC---GTPTYLAPEVLV-SVGTAGYNRAVDCWSLGVILF 210
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 177 NEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKL 236
E+ + +++H I+++ F + +V E M G L F K ++ L
Sbjct: 70 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGEL----FDKV--VGNKRLKEATC 122
Query: 237 KKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQP---KISDFGLAKLCSKDISI 293
K + + V+YLH+ I+H D+KP N+LL + KI+DFG +K+ + +
Sbjct: 123 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 179
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLL 332
+L GT Y+APE+ + G Y D +S G++L
Sbjct: 180 RTLC---GTPTYLAPEVLV-SVGTAGYNRAVDCWSLGVILF 216
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 177 NEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKL 236
E+ + +++H I+++ F + +V E M G L F K ++ L
Sbjct: 63 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGEL----FDKV--VGNKRLKEATC 115
Query: 237 KKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQP---KISDFGLAKLCSKDISI 293
K + + V+YLH+ I+H D+KP N+LL + KI+DFG +K+ + +
Sbjct: 116 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 172
Query: 294 VSLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLL 332
+L GT Y+APE+ + G Y D +S G++L
Sbjct: 173 RTLC---GTPTYLAPEVLV-SVGTAGYNRAVDCWSLGVILF 209
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 30/228 (13%)
Query: 120 VNPTRYTYKELKKITSKFKHR-LGQGGYGSVFRGKL-----FNGIPVAVKMLEHLKGNGQ 173
+N R + + KI H+ LG+G +G VF + F I K + + + +
Sbjct: 3 LNKERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVE 62
Query: 174 EFINE--VATIGRIHHF--HIVRLLGFCSEGTRRAL--VYEFMPNGSLEKFIFSKTNSSS 227
+ E V ++ H F H+ FC+ T+ L V E++ G L I S
Sbjct: 63 CTMVEKRVLSLAWEHPFLTHM-----FCTFQTKENLFFVMEYLNGGDLMYHI-----QSC 112
Query: 228 HRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLC 287
H+ + A + G+++LH ++ I++ D+K NILLD + KI+DFG+ K
Sbjct: 113 HK-FDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK-- 166
Query: 288 SKDISIVSLTAARGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMV 335
+ GT YIAPE+ + ++ D +S+G++L EM+
Sbjct: 167 ENMLGDAKTNXFCGTPDYIAPEILLGQ--KYNHSVDWWSFGVLLYEML 212
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 190 IVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
I+ L + R ALV+E + N ++ + T+ ++ + + + +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD---------IRFYMYEILKAL 144
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYI 306
+Y H + I+H D+KPHN+L+DH + ++ D+GLA+ A+R G
Sbjct: 145 DYCH---SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG-- 199
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL ++ Y D++S G ML M+
Sbjct: 200 -PELLV-DYQMYDYSLDMWSLGCMLASMI 226
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 42/218 (19%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVK--MLEHLK-GNGQEFINEVATIGRIHHFHIVRLLG 195
++GQG +G VF+ + G VA+K ++E+ K G + E+ + + H ++V L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 196 FCSEGTRRA--------LVYEF-------MPNGSLEKFIFSKTNSSSHRPLSWEKLKKIA 240
C LV++F + + L KF S+ +K++
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE-------------IKRVM 131
Query: 241 FGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS--KDISIVSLTA 298
+ G+ Y+H+ +ILH D+K N+L+ + K++DFGLA+ S K+
Sbjct: 132 QMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 299 ARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEM 334
T Y PEL GE Y D++ G ++ EM
Sbjct: 189 RVVTLWYRPPELL---LGERDYGPPIDLWGAGCIMAEM 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 42/218 (19%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVK--MLEHLK-GNGQEFINEVATIGRIHHFHIVRLLG 195
++GQG +G VF+ + G VA+K ++E+ K G + E+ + + H ++V L+
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 196 FCSEGTRRA--------LVYEF-------MPNGSLEKFIFSKTNSSSHRPLSWEKLKKIA 240
C LV++F + + L KF S+ +K++
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE-------------IKRVM 130
Query: 241 FGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS--KDISIVSLTA 298
+ G+ Y+H+ +ILH D+K N+L+ + K++DFGLA+ S K+
Sbjct: 131 QMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 187
Query: 299 ARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEM 334
T Y PEL GE Y D++ G ++ EM
Sbjct: 188 RVVTLWYRPPELL---LGERDYGPPIDLWGAGCIMAEM 222
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 141 LGQGGYGSVFRGKLFNGIPV-AVKMLEHLKGNGQEFINEVATIGRI-----HHFHIVRLL 194
+G+G Y V +L + A+++++ N E I+ V T + +H +V L
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
+R V E++ G L +F + R L E + + ++ + YLH+
Sbjct: 120 SCFQTESRLFFVIEYVNGGDL---MF---HMQRQRKLPEEHARFYSAEISLALNYLHE-- 171
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAAR-GTAGYIAPELF-S 312
+ I++ D+K N+LLD K++D+G +C + + T+ GT YIAPE+
Sbjct: 172 -RGIIYRDLKLDNVLLDSEGHIKLTDYG---MCKEGLRPGDTTSTFCGTPNYIAPEILRG 227
Query: 313 RNFGEVSYKSDVYSYGMMLLEMVGCRKNKD 342
++G + D ++ G+++ EM+ R D
Sbjct: 228 EDYG---FSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 35/208 (16%)
Query: 138 KHRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNGQEF--INEVATIGR-IHHFHIVRL 193
K LG+G + V R G+ A K++ K + ++F + A I R + H +IVRL
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFI----FSKTNSSSHRPLSWEKLKKIAFGVARGVEY 249
E + LV++ + G L + I F +SH + L+ IA+ + G
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH--CIQQILESIAYCHSNG--- 125
Query: 250 LHQGCNQRILHFDIKPHNILLDHNFQ---PKISDFGLAKLCSKDISIVSLTAAR---GTA 303
I+H ++KP N+LL + K++DFGLA I + A GT
Sbjct: 126 --------IVHRNLKPENLLLASKAKGAAVKLADFGLA------IEVNDSEAWHGFAGTP 171
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMML 331
GY++PE+ ++ S D+++ G++L
Sbjct: 172 GYLSPEVLKKD--PYSKPVDIWACGVIL 197
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 9 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 61
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 62 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E++P G + FS S + A + EYLH + +++ D+KP N
Sbjct: 122 EYVPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPEN 172
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+L+D +++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVKGRTWTLC-----GTPEYLAPEIILSKGYNKA---VDWWA 224
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 225 LGVLIYEMAA 234
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 42/218 (19%)
Query: 140 RLGQGGYGSVFRGK-LFNGIPVAVK--MLEHLK-GNGQEFINEVATIGRIHHFHIVRLLG 195
++GQG +G VF+ + G VA+K ++E+ K G + E+ + + H ++V L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 196 FCSEGTRRA--------LVYEF-------MPNGSLEKFIFSKTNSSSHRPLSWEKLKKIA 240
C LV++F + + L KF S+ +K++
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE-------------IKRVM 131
Query: 241 FGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS--KDISIVSLTA 298
+ G+ Y+H+ +ILH D+K N+L+ + K++DFGLA+ S K+
Sbjct: 132 QMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 299 ARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEM 334
T Y PEL GE Y D++ G ++ EM
Sbjct: 189 RVVTLWYRPPELL---LGERDYGPPIDLWGAGCIMAEM 223
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + +G G +G V
Sbjct: 8 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----IGTGSFGRVMLV 60
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E++P G + FS S + A + EYLH + +++ D+KP N
Sbjct: 121 EYVPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+L+D K++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 172 LLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 223
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 224 LGVLIYEMAA 233
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 8 KGXEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 60
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E++P G + FS S + A + EYLH + +++ D+KP N
Sbjct: 121 EYVPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+L+D +++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 223
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 224 LGVLIYEMAA 233
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 41/232 (17%)
Query: 127 YKELKKITSKFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQEFINEVATIGRI 185
YK+ + I + +LG G + +V+ K + N VA+K++ K + +E+ + R+
Sbjct: 16 YKDARYILVR---KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 186 HHF-----------HIVRLLGFCS----EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRP 230
+ HI++LL + G +V+E L + + + HR
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEV-----LGENLLALIKKYEHRG 127
Query: 231 LSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILL------DHNFQPKISDFGLA 284
+ +K+I+ + G++Y+H+ C I+H DIKP N+L+ ++ Q KI+D G A
Sbjct: 128 IPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185
Query: 285 KLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
C D T + T Y +PE L +G +D++S ++ E++
Sbjct: 186 --CWYD---EHYTNSIQTREYRSPEVLLGAPWG---CGADIWSTACLIFELI 229
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 15/142 (10%)
Query: 196 FCSEGTRRAL--VYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQG 253
FC+ T+ L V E++ G L I S H+ + A + G+++LH
Sbjct: 85 FCTFQTKENLFFVMEYLNGGDLMYHI-----QSCHK-FDLSRATFYAAEIILGLQFLH-- 136
Query: 254 CNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
++ I++ D+K NILLD + KI+DFG+ K + GT YIAPE+
Sbjct: 137 -SKGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCGTPDYIAPEILLG 193
Query: 314 NFGEVSYKSDVYSYGMMLLEMV 335
+ ++ D +S+G++L EM+
Sbjct: 194 Q--KYNHSVDWWSFGVLLYEML 213
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 27/166 (16%)
Query: 178 EVATIGRIHHFHIVRLLG-FCSEGTRRA-----LVYEFMPNGSLEKFIFSKTNSSSHRPL 231
E+ + ++H +I+ LL F + T LV E M + +L + I L
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI--------QMEL 123
Query: 232 SWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI 291
E++ + + + G+++LH I+H D+KP NI++ + KI DFGLA+
Sbjct: 124 DHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF 180
Query: 292 SIVSLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEMV 335
+ R Y APE+ G + YK D++S G ++ EMV
Sbjct: 181 MMTPYVVTR---YYRAPEVI---LG-MGYKENVDIWSVGCIMGEMV 219
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 35/208 (16%)
Query: 138 KHRLGQGGYGSVFRG-KLFNGIPVAVKMLEHLKGNGQEF--INEVATIGR-IHHFHIVRL 193
K LG+G + V R G+ A K++ K + ++F + A I R + H +IVRL
Sbjct: 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 93
Query: 194 LGFCSEGTRRALVYEFMPNGSLEKFI----FSKTNSSSHRPLSWEKLKKIAFGVARGVEY 249
E + LV++ + G L + I F +SH + L+ IA+ + G
Sbjct: 94 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH--CIQQILESIAYCHSNG--- 148
Query: 250 LHQGCNQRILHFDIKPHNILLDHNFQ---PKISDFGLAKLCSKDISIVSLTAAR---GTA 303
I+H ++KP N+LL + K++DFGLA I + A GT
Sbjct: 149 --------IVHRNLKPENLLLASKAKGAAVKLADFGLA------IEVNDSEAWHGFAGTP 194
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMML 331
GY++PE+ ++ S D+++ G++L
Sbjct: 195 GYLSPEVLKKD--PYSKPVDIWACGVIL 220
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 19/160 (11%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
E+ + +++H I+++ F + +V E M G L F K ++ L K
Sbjct: 204 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGEL----FDKV--VGNKRLKEATCK 256
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQP---KISDFGLAKLCSKDISIV 294
+ + V+YLH+ I+H D+KP N+LL + KI+DFG +K+ + +
Sbjct: 257 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 313
Query: 295 SLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLL 332
+L GT Y+APE+ + G Y D +S G++L
Sbjct: 314 TLC---GTPTYLAPEVLV-SVGTAGYNRAVDCWSLGVILF 349
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 19/160 (11%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
E+ + +++H I+++ F + +V E M G L F K ++ L K
Sbjct: 190 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGEL----FDKV--VGNKRLKEATCK 242
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQP---KISDFGLAKLCSKDISIV 294
+ + V+YLH+ I+H D+KP N+LL + KI+DFG +K+ + +
Sbjct: 243 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 299
Query: 295 SLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLL 332
+L GT Y+APE+ + G Y D +S G++L
Sbjct: 300 TLC---GTPTYLAPEVLV-SVGTAGYNRAVDCWSLGVILF 335
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 9 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 61
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 62 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E++P G + FS S + A + EYLH + +++ D+KP N
Sbjct: 122 EYVPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPEN 172
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+L+D +++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 224
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 225 LGVLIYEMAA 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 8 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 60
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E++P G + FS S + A + EYLH + +++ D+KP N
Sbjct: 121 EYVPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+L+D +++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 223
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 224 LGVLIYEMAA 233
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 41/232 (17%)
Query: 127 YKELKKITSKFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEHLKGNGQEFINEVATIGRI 185
YK+ + I + +LG G + +V+ K + N VA+K++ K + +E+ + R+
Sbjct: 16 YKDARYILVR---KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 186 HHF-----------HIVRLLGFCS----EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRP 230
+ HI++LL + G +V+E L + + + HR
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEV-----LGENLLALIKKYEHRG 127
Query: 231 LSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILL------DHNFQPKISDFGLA 284
+ +K+I+ + G++Y+H+ C I+H DIKP N+L+ ++ Q KI+D G A
Sbjct: 128 IPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185
Query: 285 KLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMV 335
C D T + T Y +PE L +G +D++S ++ E++
Sbjct: 186 --CWYD---EHYTNSIQTREYRSPEVLLGAPWG---CGADIWSTACLIFELI 229
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 8 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 60
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E++P G + FS S + A + EYLH + +++ D+KP N
Sbjct: 121 EYVPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+L+D +++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 223
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 224 LGVLIYEMAA 233
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 33/169 (19%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF---------IFSKTNSSSH 228
E+ + ++H +I+ LL F P SLE+F + + +
Sbjct: 73 ELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
L E++ + + + G+++LH I+H D+KP NI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG 177
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEMV 335
+ R Y APE+ G + YK D++S G+++ EM+
Sbjct: 178 TSFMMTPYVVTR---YYRAPEVI---LG-MGYKENVDIWSVGVIMGEMI 219
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 8 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 60
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E+ P G + FS S + A + EYLH + +++ D+KP N
Sbjct: 121 EYAPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+++D +++DFGLAK + GT Y+APE + S+ + + D ++
Sbjct: 172 LMIDQQGYIQVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 223
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 224 LGVLIYEMAA 233
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 190 IVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
I+ L + R ALV+E + N ++ + T+ ++ + + + +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD---------IRFYMYEILKAL 144
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYI 306
+Y H + I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG-- 199
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL ++ Y D++S G ML M+
Sbjct: 200 -PELLV-DYQMYDYSLDMWSLGCMLASMI 226
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 190 IVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
I+ L + R ALV+E + N ++ + T+ ++ + + + +
Sbjct: 93 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD---------IRFYMYEILKAL 143
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYI 306
+Y H + I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 144 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG-- 198
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL ++ Y D++S G ML M+
Sbjct: 199 -PELLV-DYQMYDYSLDMWSLGCMLASMI 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 33/169 (19%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF---------IFSKTNSSSH 228
E+ + ++H +I+ LL F P SLE+F + + +
Sbjct: 73 ELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
L E++ + + + G+++LH I+H D+KP NI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG 177
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEMV 335
+ R Y APE+ G + YK D++S G+++ EM+
Sbjct: 178 TSFMMTPYVVTR---YYRAPEVI---LG-MGYKENVDIWSVGVIMGEMI 219
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 190 IVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
I+ L + R ALV+E + N ++ + T+ ++ + + + +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD---------IRFYMYEILKAL 144
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYI 306
+Y H + I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG-- 199
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL ++ Y D++S G ML M+
Sbjct: 200 -PELLV-DYQMYDYSLDMWSLGCMLASMI 226
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 190 IVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
I+ L + R ALV+E + N ++ + T+ ++ + + + +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD---------IRFYMYEILKAL 144
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYI 306
+Y H + I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG-- 199
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL ++ Y D++S G ML M+
Sbjct: 200 -PELLV-DYQMYDYSLDMWSLGCMLASMI 226
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 190 IVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
I+ L + R ALV+E + N ++ + T+ ++ + + + +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD---------IRFYMYEILKAL 144
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYI 306
+Y H + I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG-- 199
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL ++ Y D++S G ML M+
Sbjct: 200 -PELLV-DYQMYDYSLDMWSLGCMLASMI 226
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 190 IVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
I+ L + R ALV+E + N ++ + T+ ++ + + + +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD---------IRFYMYEILKAL 144
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYI 306
+Y H + I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG-- 199
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL ++ Y D++S G ML M+
Sbjct: 200 -PELLV-DYQMYDYSLDMWSLGCMLASMI 226
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 34/216 (15%)
Query: 141 LGQGGYGSVFR--GKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHH------FHIVR 192
LG+G +G V G VAVK+++++ + +E+ + ++ F V+
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQ 81
Query: 193 LLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
+L + +V+E + L + F K N P + ++K+A+ + + V +LH
Sbjct: 82 MLEWFEHHGHICIVFELL---GLSTYDFIKENG--FLPFRLDHIRKMAYQICKSVNFLH- 135
Query: 253 GCNQRILHFDIKPHNILLDHN-----FQPKISDFGLAKLCSKDISIVSLTAAR------- 300
+ ++ H D+KP NIL + + PKI L + DI +V +A
Sbjct: 136 --SNKLTHTDLKPENILFVQSDYTEAYNPKIKR-DERTLINPDIKVVDFGSATYDDEHHS 192
Query: 301 ---GTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLE 333
T Y APE+ G S DV+S G +L+E
Sbjct: 193 TLVSTRHYRAPEVI-LALG-WSQPCDVWSIGCILIE 226
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 259 LHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR---NF 315
+H DIKP NIL+D N +++DFG +D ++ S + A GT YI+PE+
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS-SVAVGTPDYISPEILQAMEGGK 255
Query: 316 GEVSYKSDVYSYGMMLLEMV 335
G + D +S G+ + EM+
Sbjct: 256 GRYGPECDWWSLGVCMYEML 275
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 190 IVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
I+ L + R ALV+E + N ++ + T+ ++ + + + +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD---------IRFYMYEILKAL 144
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYI 306
+Y H + I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG-- 199
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL ++ Y D++S G ML M+
Sbjct: 200 -PELLV-DYQMYDYSLDMWSLGCMLASMI 226
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 190 IVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
I+ L + R ALV+E + N ++ + T+ ++ + + + +
Sbjct: 93 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD---------IRFYMYEILKAL 143
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYI 306
+Y H + I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 144 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG-- 198
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL ++ Y D++S G ML M+
Sbjct: 199 -PELLV-DYQMYDYSLDMWSLGCMLASMI 225
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 190 IVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
I+ L + R ALV+E + N ++ + T+ ++ + + + +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD---------IRFYMYEILKAL 144
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYI 306
+Y H + I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG-- 199
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL ++ Y D++S G ML M+
Sbjct: 200 -PELLV-DYQMYDYSLDMWSLGCMLASMI 226
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 109/250 (43%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 8 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 60
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E+ P G + FS S + A + EYLH + +++ D+KP N
Sbjct: 121 EYAPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+++D K++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 172 LMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 223
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 224 LGVLIYEMAA 233
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 190 IVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
I+ L + R ALV+E + N ++ + T+ ++ + + + +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD---------IRFYMYEILKAL 144
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYI 306
+Y H + I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG-- 199
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL ++ Y D++S G ML M+
Sbjct: 200 -PELLV-DYQMYDYSLDMWSLGCMLASMI 226
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 111/250 (44%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 8 KGXEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 60
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E++P G E F + P + + A + EYLH + +++ D+KP N
Sbjct: 121 EYVPGG--EMFSHLRRIGRFXEPHA----RFYAAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+L+D +++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 223
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 224 LGVLIYEMAA 233
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 190 IVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
I+ L + R ALV+E + N ++ + T+ ++ + + + +
Sbjct: 92 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD---------IRFYMYEILKAL 142
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYI 306
+Y H + I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 143 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG-- 197
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL ++ Y D++S G ML M+
Sbjct: 198 -PELLV-DYQMYDYSLDMWSLGCMLASMI 224
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 111/250 (44%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 8 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 60
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E++P G E F + P + + A + EYLH + +++ D+KP N
Sbjct: 121 EYVPGG--EMFSHLRRIGRFXEPHA----RFYAAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+L+D +++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 223
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 224 LGVLIYEMAA 233
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 190 IVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
I+ L + R ALV+E + N ++ + T+ ++ + + + +
Sbjct: 99 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYD---------IRFYMYEILKAL 149
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYI 306
+Y H + I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 150 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG-- 204
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL ++ Y D++S G ML M+
Sbjct: 205 -PELLV-DYQMYDYSLDMWSLGCMLASMI 231
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 111/250 (44%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 9 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 61
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 62 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 121
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E++P G E F + P + + A + EYLH + +++ D+KP N
Sbjct: 122 EYVPGG--EMFSHLRRIGRFXEPHA----RFYAAQIVLTFEYLH---SLDLIYRDLKPEN 172
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+L+D +++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 173 LLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 224
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 225 LGVLIYEMAA 234
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 140 RLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQ---EFINEVATIGRI--HHFHIVRLL 194
++G GG VF+ A+K + + + Q + NE+A + ++ H I+RL
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
+ E T + +Y M G+++ + K S WE+ K + V +HQ
Sbjct: 123 DY--EITDQ-YIYMVMECGNIDLNSWLKKKKSID---PWER-KSYWKNMLEAVHTIHQ-- 173
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF--- 311
I+H D+KP N L+ K+ DFG+A D + V + GT Y+ PE
Sbjct: 174 -HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 312 --SRNFG----EVSYKSDVYSYGMMLLEMV 335
SR G ++S KSDV+S G +L M
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMT 261
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 22/199 (11%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFHIVRLLGF 196
+G+G + V R KL G A K++ + L + + A I R+ H +IVRL
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
SE LV++ + G L + I ++ S + V + HQ
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSE------ADASHCIQQILEAVLHCHQ---M 122
Query: 257 RILHFDIKPHNILLDHNFQ---PKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
++H D+KP N+LL + K++DFGLA D + GT GY++PE+ +
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPGYLSPEVLRK 180
Query: 314 N-FGEVSYKSDVYSYGMML 331
+G+ D+++ G++L
Sbjct: 181 EAYGK---PVDIWACGVIL 196
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 8 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 60
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E+ P G E F + P + + A + EYLH + +++ D+KP N
Sbjct: 121 EYAPGG--EMFSHLRRIGRFXEPHA----RFYAAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+++D K++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 172 LMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 223
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 224 LGVLIYEMAA 233
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 187 HFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARG 246
H +IV+L + LV E + G L F + H S + I +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGEL----FERIKKKKH--FSETEASYIMRKLVSA 118
Query: 247 VEYLHQGCNQRILHFDIKPHNILL---DHNFQPKISDFGLAKLCSKDISIVSLTAARGTA 303
V ++H + ++H D+KP N+L + N + KI DFG A+L D L T
Sbjct: 119 VSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--PLKTPCFTL 173
Query: 304 GYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
Y APEL ++N + S D++S G++L M+
Sbjct: 174 HYAAPELLNQNGYDES--CDLWSLGVILYTMLS 204
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 140 RLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQ---EFINEVATIGRI--HHFHIVRLL 194
++G GG VF+ A+K + + + Q + NE+A + ++ H I+RL
Sbjct: 19 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
+ E T + +Y M G+++ + K S WE+ K + V +HQ
Sbjct: 79 DY--EITDQ-YIYMVMECGNIDLNSWLKKKKSID---PWER-KSYWKNMLEAVHTIHQ-- 129
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF--- 311
I+H D+KP N L+ K+ DFG+A D + V + GT Y+ PE
Sbjct: 130 -HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 187
Query: 312 --SRNFG----EVSYKSDVYSYGMMLLEM 334
SR G ++S KSDV+S G +L M
Sbjct: 188 SSSRENGKSKSKISPKSDVWSLGCILYYM 216
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 140 RLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQ---EFINEVATIGRI--HHFHIVRLL 194
++G GG VF+ A+K + + + Q + NE+A + ++ H I+RL
Sbjct: 16 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
+ E T + +Y M G+++ + K S WE+ K + V +HQ
Sbjct: 76 DY--EITDQ-YIYMVMECGNIDLNSWLKKKKSID---PWER-KSYWKNMLEAVHTIHQ-- 126
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF--- 311
I+H D+KP N L+ K+ DFG+A D + V + GT Y+ PE
Sbjct: 127 -HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 184
Query: 312 --SRNFG----EVSYKSDVYSYGMMLLEMV 335
SR G ++S KSDV+S G +L M
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMT 214
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 140 RLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQ---EFINEVATIGRI--HHFHIVRLL 194
++G GG VF+ A+K + + + Q + NE+A + ++ H I+RL
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
+ E T + +Y M G+++ + K S WE+ K + V +HQ
Sbjct: 123 DY--EITDQ-YIYMVMECGNIDLNSWLKKKKSID---PWER-KSYWKNMLEAVHTIHQ-- 173
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF--- 311
I+H D+KP N L+ K+ DFG+A D + V + GT Y+ PE
Sbjct: 174 -HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 312 --SRNFG----EVSYKSDVYSYGMMLLEMV 335
SR G ++S KSDV+S G +L M
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMT 261
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 190 IVRLLGFCSEGTRR--ALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGV 247
I+ L + R ALV+E + N ++ + T+ ++ + + + +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLRQTLTDYD---------IRFYMYEILKAL 144
Query: 248 EYLHQGCNQRILHFDIKPHNILLDHNFQP-KISDFGLAKLCSKDISIVSLTAARGTAGYI 306
+Y H + I+H D+KPHN+++DH + ++ D+GLA+ A+R G
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG-- 199
Query: 307 APELFSRNFGEVSYKSDVYSYGMMLLEMV 335
PEL ++ Y D++S G ML M+
Sbjct: 200 -PELLV-DYQMYDYSLDMWSLGCMLASMI 226
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 140 RLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQ---EFINEVATIGRI--HHFHIVRLL 194
++G GG VF+ A+K + + + Q + NE+A + ++ H I+RL
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
+ E T + +Y M G+++ + K S WE+ K + V +HQ
Sbjct: 95 DY--EITDQ-YIYMVMECGNIDLNSWLKKKKSID---PWER-KSYWKNMLEAVHTIHQ-- 145
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF--- 311
I+H D+KP N L+ K+ DFG+A D + V + GT Y+ PE
Sbjct: 146 -HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 203
Query: 312 --SRNFG----EVSYKSDVYSYGMMLLEM 334
SR G ++S KSDV+S G +L M
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYM 232
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 93/218 (42%), Gaps = 40/218 (18%)
Query: 141 LGQGGYGSVFR------GKLFNGIPVAVKMLEHLKGNGQEFINEVATIGR-IHHFHIVRL 193
+G+G + V R G+ F V V G E + A+I + H HIV L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 194 LGFCSEGTRRALVYEFMPNGSL---------EKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
L S +V+EFM L F++S+ +S + E L+
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR------- 144
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILL--DHNFQP-KISDFGLAKLCSKDISIVSLTAARG 301
Y H + I+H D+KP N+LL N P K+ DFG+A + S + G
Sbjct: 145 ----YCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGE--SGLVAGGRVG 195
Query: 302 TAGYIAPELFSRN-FGEVSYKSDVYSYGMMLLEMV-GC 337
T ++APE+ R +G+ DV+ G++L ++ GC
Sbjct: 196 TPHFMAPEVVKREPYGK---PVDVWGCGVILFILLSGC 230
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 205 LVYEFMPNGSLEKF---------IFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCN 255
L+ F P SLE+F + + L E++ + + + G+++LH
Sbjct: 90 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 148
Query: 256 QRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNF 315
I+H D+KP NI++ + KI DFGLA+ +V R Y APE+
Sbjct: 149 --IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTR---YYRAPEVI---L 200
Query: 316 GEVSYKS--DVYSYGMMLLEMV 335
G + YK D++S G ++ EM+
Sbjct: 201 G-MGYKENVDIWSVGCIMGEMI 221
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 140 RLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQ---EFINEVATIGRI--HHFHIVRLL 194
++G GG VF+ A+K + + + Q + NE+A + ++ H I+RL
Sbjct: 15 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
+ E T + +Y M G+++ + K S WE+ K + V +HQ
Sbjct: 75 DY--EITDQ-YIYMVMECGNIDLNSWLKKKKSID---PWER-KSYWKNMLEAVHTIHQ-- 125
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF--- 311
I+H D+KP N L+ K+ DFG+A D + V + GT Y+ PE
Sbjct: 126 -HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 183
Query: 312 --SRNFG----EVSYKSDVYSYGMMLLEM 334
SR G ++S KSDV+S G +L M
Sbjct: 184 SSSRENGKSKSKISPKSDVWSLGCILYYM 212
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 27/166 (16%)
Query: 178 EVATIGRIHHFHIVRLLG-FCSEGTRRA-----LVYEFMPNGSLEKFIFSKTNSSSHRPL 231
E+ + ++H +I+ LL F + T LV E M + +L + I L
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI--------QMEL 123
Query: 232 SWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI 291
E++ + + + G+++LH I+H D+KP NI++ + KI DFGLA+
Sbjct: 124 DHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF 180
Query: 292 SIVSLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEMV 335
+ R Y APE+ G + YK D++S G ++ EMV
Sbjct: 181 MMTPYVVTR---YYRAPEVI---LG-MGYKENVDIWSVGCIMGEMV 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 27/166 (16%)
Query: 178 EVATIGRIHHFHIVRLLG-FCSEGTRRA-----LVYEFMPNGSLEKFIFSKTNSSSHRPL 231
E+ + ++H +I+ LL F + T LV E M + +L + I L
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI--------QMEL 123
Query: 232 SWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI 291
E++ + + + G+++LH I+H D+KP NI++ + KI DFGLA+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF 180
Query: 292 SIVSLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEMV 335
+ R Y APE+ G + YK D++S G ++ EMV
Sbjct: 181 MMTPYVVTR---YYRAPEVI---LG-MGYKENVDIWSVGCIMGEMV 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 33/169 (19%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF---------IFSKTNSSSH 228
E+ + ++H +I+ LL F P SLE+F + + +
Sbjct: 73 ELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
L E++ + + + G+++LH I+H D+KP NI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG 177
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEMV 335
+ R Y APE+ G + YK D++S G ++ EM+
Sbjct: 178 TSFMMTPYVVTR---YYRAPEVI---LG-MGYKENVDIWSVGCIMGEMI 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 27/166 (16%)
Query: 178 EVATIGRIHHFHIVRLLG-FCSEGTRRA-----LVYEFMPNGSLEKFIFSKTNSSSHRPL 231
E+ + ++H +I+ LL F + T LV E M + +L + I L
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI--------QMEL 116
Query: 232 SWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDI 291
E++ + + + G+++LH I+H D+KP NI++ + KI DFGLA+
Sbjct: 117 DHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF 173
Query: 292 SIVSLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEMV 335
+ R Y APE+ G + YK D++S G ++ EMV
Sbjct: 174 MMTPYVVTR---YYRAPEVI---LG-MGYKENVDIWSVGCIMGEMV 212
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 24/200 (12%)
Query: 141 LGQGGYGSVFRG-KLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFHIVRLLGF 196
LG+G + V R K+ G A K++ + L + + A I R+ H +IVRL
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
SE L+++ + G L + I ++ S + +++I V LH C+Q
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEAD--ASHCIQQILEAV------LH--CHQ 139
Query: 257 R-ILHFDIKPHNILLDHNFQ---PKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFS 312
++H D+KP N+LL + K++DFGLA + + GT GY++PE+
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLR 197
Query: 313 RN-FGEVSYKSDVYSYGMML 331
++ +G+ D+++ G++L
Sbjct: 198 KDPYGK---PVDLWACGVIL 214
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 109/250 (43%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 8 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 60
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 61 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E+ P G + FS S + A + EYLH + +++ D+KP N
Sbjct: 121 EYAPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+++D +++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 172 LMIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 223
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 224 LGVLIYEMAA 233
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 22/150 (14%)
Query: 140 RLGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATI-----GRIHHFH 189
+LG G + +V+ +GK F + V VK EH + I + ++ +
Sbjct: 44 KLGWGHFSTVWLSWDIQGKKFVAMKV-VKSAEHYTETALDEIRLLKSVRNSDPNDPNREM 102
Query: 190 IVRLLGFCS----EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVAR 245
+V+LL GT +V+E + + L+ I S+++ L +KKI V +
Sbjct: 103 VVQLLDDFKISGVNGTHICMVFEVLGHHLLKWII-----KSNYQGLPLPCVKKIIQQVLQ 157
Query: 246 GVEYLHQGCNQRILHFDIKPHNILLDHNFQ 275
G++YLH C RI+H DIKP NILL N Q
Sbjct: 158 GLDYLHTKC--RIIHTDIKPENILLSVNEQ 185
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 22/150 (14%)
Query: 140 RLGQGGYGSVF-----RGKLFNGIPVAVKMLEHLKGNGQEFINEVATI-----GRIHHFH 189
+LG G + +V+ +GK F + V VK EH + I + ++ +
Sbjct: 28 KLGWGHFSTVWLSWDIQGKKFVAMKV-VKSAEHYTETALDEIRLLKSVRNSDPNDPNREM 86
Query: 190 IVRLLGFCS----EGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVAR 245
+V+LL GT +V+E + + L+ I S+++ L +KKI V +
Sbjct: 87 VVQLLDDFKISGVNGTHICMVFEVLGHHLLKWII-----KSNYQGLPLPCVKKIIQQVLQ 141
Query: 246 GVEYLHQGCNQRILHFDIKPHNILLDHNFQ 275
G++YLH C RI+H DIKP NILL N Q
Sbjct: 142 GLDYLHTKC--RIIHTDIKPENILLSVNEQ 169
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 140 RLGQGGYGSVFRGKLFNGIPVAVKMLEHLKGNGQ---EFINEVATIGRI--HHFHIVRLL 194
++G GG VF+ A+K + + + Q + NE+A + ++ H I+RL
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 195 GFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGC 254
+ E T + +Y M G+++ + K S WE+ K + V +HQ
Sbjct: 95 DY--EITDQ-YIYMVMECGNIDLNSWLKKKKSID---PWER-KSYWKNMLEAVHTIHQ-- 145
Query: 255 NQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELF--- 311
I+H D+KP N L+ K+ DFG+A D V + GT Y+ PE
Sbjct: 146 -HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDM 203
Query: 312 --SRNFG----EVSYKSDVYSYGMMLLEM 334
SR G ++S KSDV+S G +L M
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYM 232
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 109/250 (43%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 8 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 60
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 61 KHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVM 120
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E++P G + FS S + A + EYLH + +++ D+KP N
Sbjct: 121 EYVPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+L+D +++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 223
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 224 LGVLIYEMAA 233
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 22/199 (11%)
Query: 141 LGQGGYGSVFR-GKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFHIVRLLGF 196
LG+G + V R K+ G A K++ + L + + A I R+ H +IVRL
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
SE LV++ + G L + I ++ S + + + +E ++
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSE---------ADASHCIQQILESVNHCHLN 122
Query: 257 RILHFDIKPHNILLDHNFQ---PKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
I+H D+KP N+LL + K++DFGLA D + GT GY++PE+ +
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPGYLSPEVLRK 180
Query: 314 N-FGEVSYKSDVYSYGMML 331
+ +G+ D+++ G++L
Sbjct: 181 DPYGK---PVDMWACGVIL 196
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 32/234 (13%)
Query: 111 EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRGK-LFNGIPVAVKMLEH 167
E FL+ + NP + T + ++I + LG G +G V K + G A+K+L+
Sbjct: 10 EDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLVKHMETGNHYAMKILDK 62
Query: 168 LK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKT 223
K + +NE + ++ +V+L + + +V E++P G + FS
Sbjct: 63 QKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHL 118
Query: 224 NSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGL 283
S + A + EYLH + +++ D+KP N+L+D +++DFG
Sbjct: 119 RRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 173
Query: 284 AKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYGMMLLEMVG 336
AK + GT Y+APE + S+ + + D ++ G+++ EM
Sbjct: 174 AKRVKGRTWTLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 219
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 109/250 (43%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 8 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 60
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 61 KHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVM 120
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E++P G + FS S + A + EYLH + +++ D+KP N
Sbjct: 121 EYVPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+L+D +++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 223
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 224 LGVLIYEMAA 233
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 22/199 (11%)
Query: 141 LGQGGYGSVFR-GKLFNGIPVAVKML--EHLKGNGQEFINEVATIGRI-HHFHIVRLLGF 196
LG+G + V R K+ G A K++ + L + + A I R+ H +IVRL
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 197 CSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQ 256
SE LV++ + G L + I ++ S + + + +E ++
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSE---------ADASHCIQQILESVNHCHLN 122
Query: 257 RILHFDIKPHNILLDHNFQ---PKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSR 313
I+H D+KP N+LL + K++DFGLA D + GT GY++PE+ +
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPGYLSPEVLRK 180
Query: 314 N-FGEVSYKSDVYSYGMML 331
+ +G+ D+++ G++L
Sbjct: 181 DPYGK---PVDMWACGVIL 196
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 9 KGXEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 61
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ + +L + + +V
Sbjct: 62 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVM 121
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E+ P G + FS S + A + EYLH + +++ D+KP N
Sbjct: 122 EYAPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPEN 172
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+++D K++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 173 LMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 224
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 225 LGVLIYEMAA 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 109/250 (43%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 8 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 60
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K G A+K+L+ K + +NE + ++ +V+L + + +V
Sbjct: 61 KHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVM 120
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E++P G + FS S + A + EYLH + +++ D+KP N
Sbjct: 121 EYVPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPEN 171
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+L+D +++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 223
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 224 LGVLIYEMAA 233
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 30/214 (14%)
Query: 141 LGQGGYGSVFR--GKLFNGIPVAVKMLEHLKGNGQEFINEVATIGRIHH------FHIVR 192
LG+G +G V G VAVK+++++ + +E+ + ++ F V+
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQ 81
Query: 193 LLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQ 252
+L + +V+E + L + F K N P + ++K+A+ + + V +LH
Sbjct: 82 MLEWFEHHGHICIVFELL---GLSTYDFIKENG--FLPFRLDHIRKMAYQICKSVNFLH- 135
Query: 253 GCNQRILHFDIKPHNILLDHN-----FQPKISDFGLAKLCSKDISIVSLTAARGTAGYIA 307
+ ++ H D+KP NIL + + PKI L + DI +V +A + +
Sbjct: 136 --SNKLTHTDLKPENILFVQSDYTEAYNPKIKR-DERTLINPDIKVVDFGSATYDDEHHS 192
Query: 308 PELFSRNF--GEV------SYKSDVYSYGMMLLE 333
+ R++ EV S DV+S G +L+E
Sbjct: 193 TLVXXRHYRAPEVILALGWSQPCDVWSIGCILIE 226
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 9 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 61
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ + +L + + +V
Sbjct: 62 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVM 121
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E+ P G + FS S + A + EYLH + +++ D+KP N
Sbjct: 122 EYAPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPEN 172
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+++D K++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 173 LMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 224
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 225 LGVLIYEMAA 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 29/248 (11%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGK- 153
K E E KE K E FL+ + + + ++I + LG G +G V K
Sbjct: 29 KGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVKH 83
Query: 154 LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEF 209
G A+K+L+ K + +NE + ++ +V+L + + +V E+
Sbjct: 84 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 210 MPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNIL 269
+P G + FS S + A + EYLH + +++ D+KP N+L
Sbjct: 144 VPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLL 194
Query: 270 LDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYG 328
+D +++DFG AK + GT Y+APE + S+ + + D ++ G
Sbjct: 195 IDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALG 246
Query: 329 MMLLEMVG 336
+++ EM
Sbjct: 247 VLIYEMAA 254
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 33/169 (19%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF---------IFSKTNSSSH 228
E+ + ++H +I+ LL F P SLE+F + + +
Sbjct: 73 ELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
L E++ + + + G+++LH I+H D+KP NI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG 177
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEMV 335
+ R Y APE+ G + YK D++S G ++ EM+
Sbjct: 178 TSFMMTPYVVTR---YYRAPEVI---LG-MGYKENVDIWSVGCIMGEMI 219
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLK 237
E+A + R+ H +I+++L LV E +G L+ F F + PL+ +
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFR 137
Query: 238 KIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLT 297
++ V YL + I+H DIK NI++ +F K+ DFG A + +
Sbjct: 138 QLVSAVG----YLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC 190
Query: 298 AARGTAGYIAPELFSRNFGEVSYKS---DVYSYGMMLLEMV 335
GT Y APE+ N Y+ +++S G+ L +V
Sbjct: 191 ---GTIEYCAPEVLMGN----PYRGPELEMWSLGVTLYTLV 224
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 33/169 (19%)
Query: 178 EVATIGRIHHFHIVRLLGFCSEGTRRALVYEFMPNGSLEKF---------IFSKTNSSSH 228
E+ + ++H +I+ LL F P +LE+F + +
Sbjct: 73 ELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQ 120
Query: 229 RPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCS 288
L E++ + + + G+++LH I+H D+KP NI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG 177
Query: 289 KDISIVSLTAARGTAGYIAPELFSRNFGEVSYKS--DVYSYGMMLLEMV 335
+ R Y APE+ G + YK D++S G ++ EMV
Sbjct: 178 TSFMMTPYVVTR---YYRAPEVI---LG-MGYKENVDIWSVGCIMGEMV 219
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 29/248 (11%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGK- 153
K E E KE K E FL+ + + + ++I + LG G +G V K
Sbjct: 9 KGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVKH 63
Query: 154 LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEF 209
G A+K+L+ K + +NE + ++ +V+L + + +V E+
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 210 MPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNIL 269
+P G + FS S + A + EYLH + +++ D+KP N+L
Sbjct: 124 VPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 270 LDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYG 328
+D +++DFG AK + GT Y+APE + S+ + + D ++ G
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALG 226
Query: 329 MMLLEMVG 336
+++ EM
Sbjct: 227 VLIYEMAA 234
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 21/138 (15%)
Query: 209 FMPNGSLEKF---------IFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRIL 259
F P SLE+F + + + L E++ + + + G+++LH I+
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---II 148
Query: 260 HFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVS 319
H D+KP NI++ + KI DFGLA+ + R Y APE+ G +
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVI---LG-MG 201
Query: 320 YKS--DVYSYGMMLLEMV 335
YK D++S G ++ EM+
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 29/248 (11%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGK- 153
K E E KE K E FL+ + + + ++I + LG G +G V K
Sbjct: 9 KGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVKH 63
Query: 154 LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEF 209
G A+K+L+ K + +NE + ++ +V+L + + +V E+
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 210 MPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNIL 269
+P G + FS S + A + EYLH + +++ D+KP N+L
Sbjct: 124 VPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 270 LDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYG 328
+D +++DFG AK + GT Y+APE + S+ + + D ++ G
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALG 226
Query: 329 MMLLEMVG 336
+++ EM
Sbjct: 227 VLIYEMAA 234
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSE--GTRRAL--VYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
HIVR++ R+ L V E + G L FS+ + + + +I +
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIG 125
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDH---NFQPKISDFGLAKLCSKDISIVSLTAARG 301
++YLH + I H D+KP N+L N K++DFG AK + S SLT
Sbjct: 126 EAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY 179
Query: 302 TAGYIAPELFSRNFGEVSYKSDVYSYGMML 331
T Y+APE+ + S D++S G+++
Sbjct: 180 TPYYVAPEVLGPEKYDKS--CDMWSLGVIM 207
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 29/248 (11%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGK- 153
K E E KE K E FL+ + + + ++I + LG G +G V K
Sbjct: 9 KGXEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVKH 63
Query: 154 LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEF 209
G A+K+L+ K + +NE + ++ +V+L + + +V E+
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 210 MPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNIL 269
+P G + FS S + A + EYLH + +++ D+KP N+L
Sbjct: 124 VPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 270 LDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYG 328
+D +++DFG AK + GT Y+APE + S+ + + D ++ G
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALG 226
Query: 329 MMLLEMVG 336
+++ EM
Sbjct: 227 VLIYEMAA 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 29/248 (11%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGK- 153
K E E KE K E FL+ + T + + +I + LG G +G V K
Sbjct: 8 KGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKT-----LGTGSFGRVMLVKH 62
Query: 154 LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEF 209
+G A+K+L+ K + +NE + ++ +V+L + + +V E+
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 210 MPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNIL 269
+ G + FS S + A + EYLH + +++ D+KP N+L
Sbjct: 123 VAGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 270 LDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYG 328
+D +++DFG AK ++ GT Y+APE + S+ + + D ++ G
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLA-----GTPEYLAPEIILSKGYNKA---VDWWALG 225
Query: 329 MMLLEMVG 336
+++ EM
Sbjct: 226 VLIYEMAA 233
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 109/250 (43%), Gaps = 33/250 (13%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYT--YKELKKITSKFKHRLGQGGYGSVFRG 152
K E E KE K E FL+ + NP + T + ++I + LG G +G V
Sbjct: 9 KGSEQESVKEFLAKAKEDFLKKWE--NPAQNTAHLDQFERIKT-----LGTGSFGRVMLV 61
Query: 153 K-LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVY 207
K + G A+K+L+ K + +NE + ++ + +L + + +V
Sbjct: 62 KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVM 121
Query: 208 EFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHN 267
E+ P G E F + P + + A + EYLH + +++ D+KP N
Sbjct: 122 EYAPGG--EMFSHLRRIGRFXEPHA----RFYAAQIVLTFEYLH---SLDLIYRDLKPEN 172
Query: 268 ILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYS 326
+++D K++DFG AK + GT Y+APE + S+ + + D ++
Sbjct: 173 LMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWA 224
Query: 327 YGMMLLEMVG 336
G+++ EM
Sbjct: 225 LGVLIYEMAA 234
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSE--GTRRAL--VYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
HIVR++ R+ L V E + G L FS+ + + + +I +
Sbjct: 71 HIVRIVDVYENLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIG 126
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDH---NFQPKISDFGLAKLCSKDISIVSLTAARG 301
++YLH + I H D+KP N+L N K++DFG AK + S SLT
Sbjct: 127 EAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY 180
Query: 302 TAGYIAPELFSRNFGEVSYKSDVYSYGMML 331
T Y+APE+ + S D++S G+++
Sbjct: 181 TPYYVAPEVLGPEKYDKS--CDMWSLGVIM 208
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSE--GTRRAL--VYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
HIVR++ R+ L V E + G L FS+ + + + +I +
Sbjct: 78 HIVRIVDVYENLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIG 133
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDH---NFQPKISDFGLAKLCSKDISIVSLTAARG 301
++YLH + I H D+KP N+L N K++DFG AK + S SLT
Sbjct: 134 EAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY 187
Query: 302 TAGYIAPELFSRNFGEVSYKSDVYSYGMML 331
T Y+APE+ + S D++S G+++
Sbjct: 188 TPYYVAPEVLGPEKYDKS--CDMWSLGVIM 215
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSE--GTRRAL--VYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
HIVR++ R+ L V E + G L FS+ + + + +I +
Sbjct: 122 HIVRIVDVYENLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIG 177
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDH---NFQPKISDFGLAKLCSKDISIVSLTAARG 301
++YLH + I H D+KP N+L N K++DFG AK + S SLT
Sbjct: 178 EAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY 231
Query: 302 TAGYIAPELFSRNFGEVSYKSDVYSYGMML 331
T Y+APE+ + S D++S G+++
Sbjct: 232 TPYYVAPEVLGPEKYDKS--CDMWSLGVIM 259
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSE--GTRRAL--VYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
HIVR++ R+ L V E + G L FS+ + + + +I +
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIG 171
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDH---NFQPKISDFGLAKLCSKDISIVSLTAARG 301
++YLH + I H D+KP N+L N K++DFG AK + S SLT
Sbjct: 172 EAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY 225
Query: 302 TAGYIAPELFSRNFGEVSYKSDVYSYGMML 331
T Y+APE+ + S D++S G+++
Sbjct: 226 TPYYVAPEVLGPEKYDKS--CDMWSLGVIM 253
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 29/248 (11%)
Query: 96 KSRESEKEKETQLKV-EKFLEDYRTVNPTRYTYKELKKITSKFKHRLGQGGYGSVFRGK- 153
K E E KE K E FL+ + + + ++I + LG G +G V K
Sbjct: 9 KGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKT-----LGTGSFGRVMLVKH 63
Query: 154 LFNGIPVAVKMLEHLK----GNGQEFINEVATIGRIHHFHIVRLLGFCSEGTRRALVYEF 209
G A+K+L+ K + +NE + ++ +V+L + + +V E+
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 210 MPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRILHFDIKPHNIL 269
P G + FS S + A + EYLH + +++ D+KP N++
Sbjct: 124 APGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 270 LDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPE-LFSRNFGEVSYKSDVYSYG 328
+D K++DFG AK + GT Y+APE + S+ + + D ++ G
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALG 226
Query: 329 MMLLEMVG 336
+++ EM
Sbjct: 227 VLIYEMAA 234
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 240 AFGVARGVEYLHQGCNQRILHFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAA 299
A ++ G+ +LH+ + I++ D+K N++LD KI+DFG+ K D V+
Sbjct: 126 AAEISIGLFFLHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD--GVTTREF 180
Query: 300 RGTAGYIAPELFSRNFGEVSYKSDVYSYGMMLLEMVG 336
GT YIAPE+ + + D ++YG++L EM+
Sbjct: 181 CGTPDYIAPEIIA--YQPYGKSVDWWAYGVLLYEMLA 215
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 260 HFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVS 319
H D+KP NIL+ + + DFG+A + D + L GT Y APE FS + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIAS-ATTDEKLTQLGNTVGTLYYXAPERFSES--HAT 213
Query: 320 YKSDVYSYGMMLLE 333
Y++D+Y+ +L E
Sbjct: 214 YRADIYALTCVLYE 227
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSE--GTRRAL--VYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
HIVR++ R+ L V E + G L FS+ + + + +I +
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIG 127
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDH---NFQPKISDFGLAKLCSKDISIVSLTAARG 301
++YLH + I H D+KP N+L N K++DFG AK + S SLT
Sbjct: 128 EAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY 181
Query: 302 TAGYIAPELFSRNFGEVSYKSDVYSYGMML 331
T Y+APE+ + S D++S G+++
Sbjct: 182 TPYYVAPEVLGPEKYDKS--CDMWSLGVIM 209
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSE--GTRRAL--VYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
HIVR++ R+ L V E + G L FS+ + + + +I +
Sbjct: 77 HIVRIVDVYENLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIG 132
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDH---NFQPKISDFGLAKLCSKDISIVSLTAARG 301
++YLH + I H D+KP N+L N K++DFG AK + S SLT
Sbjct: 133 EAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY 186
Query: 302 TAGYIAPELFSRNFGEVSYKSDVYSYGMML 331
T Y+APE+ + S D++S G+++
Sbjct: 187 TPYYVAPEVLGPEKYDKS--CDMWSLGVIM 214
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 21/138 (15%)
Query: 209 FMPNGSLEKF---------IFSKTNSSSHRPLSWEKLKKIAFGVARGVEYLHQGCNQRIL 259
F P SLE+F + + + L E++ + + + G+++LH I+
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---II 148
Query: 260 HFDIKPHNILLDHNFQPKISDFGLAKLCSKDISIVSLTAARGTAGYIAPELFSRNFGEVS 319
H D+KP NI++ + KI DFGLA+ + R Y APE+ G +
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YYRAPEVI---LG-MG 201
Query: 320 YKS--DVYSYGMMLLEMV 335
YK D++S G ++ EM+
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 189 HIVRLLGFCSE--GTRRAL--VYEFMPNGSLEKFIFSKTNSSSHRPLSWEKLKKIAFGVA 244
HIVR++ R+ L V E + G L FS+ + + + +I +
Sbjct: 86 HIVRIVDVYENLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIG 141
Query: 245 RGVEYLHQGCNQRILHFDIKPHNILLDH---NFQPKISDFGLAKLCSKDISIVSLTAARG 301
++YLH + I H D+KP N+L N K++DFG AK + S SLT
Sbjct: 142 EAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY 195
Query: 302 TAGYIAPELFSRNFGEVSYKSDVYSYGMML 331
T Y+APE+ + S D++S G+++
Sbjct: 196 TPYYVAPEVLGPEKYDKS--CDMWSLGVIM 223
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,143,181
Number of Sequences: 62578
Number of extensions: 406163
Number of successful extensions: 2859
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 260
Number of HSP's that attempted gapping in prelim test: 925
Number of HSP's gapped (non-prelim): 1120
length of query: 344
length of database: 14,973,337
effective HSP length: 100
effective length of query: 244
effective length of database: 8,715,537
effective search space: 2126591028
effective search space used: 2126591028
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)