BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041355
(180 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 239 bits (609), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 123/171 (71%), Positives = 136/171 (79%), Gaps = 17/171 (9%)
Query: 11 VCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----------------- 53
VCSPKKGE V+VSAASGAVGQLVGQFAK+ GCYVVGSAGSKEK
Sbjct: 148 VCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLKSKFGFDEAFNYK 207
Query: 54 EEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVH 113
EE DL AALKR+FP GIDIYFENVGGKMLDAVL+NM+L GRIAV +ISQYNLE+ EGVH
Sbjct: 208 EEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVH 267
Query: 114 NLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIPAIREGKMVYVEDIAEGLE 164
NL LI KRIR+EGFL DYYHLY K+LE+VIP I+ GK+VYVED+A GLE
Sbjct: 268 NLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVAHGLE 318
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 228 bits (581), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/172 (67%), Positives = 130/172 (75%), Gaps = 17/172 (9%)
Query: 11 VCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----------------- 53
VCSPK+GE VYVSAASGAVGQLVGQ AK+ GCYVVGSAGSKEK
Sbjct: 150 VCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYK 209
Query: 54 EEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVH 113
EE DL AALKR FP GIDIYFENVGGKMLDAVL+NM + GRIAV +ISQYNLE EGVH
Sbjct: 210 EESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVH 269
Query: 114 NLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIPAIREGKMVYVEDIAEGLEK 165
NL +I KR R++GF+ D+Y Y KFLE V+P IREGK+ YVED+A+GLEK
Sbjct: 270 NLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEK 321
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 98/183 (53%), Gaps = 17/183 (9%)
Query: 8 IILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-------------- 53
++ V PK GE V +S A+GAVG + GQ A+L GC VVG AG EK
Sbjct: 141 LLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAI 200
Query: 54 --EEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQY-NLEKPE 110
+ DL A LKR P+GID++F+NVGG++LD VL + + RI + ISQY N E
Sbjct: 201 DYKNEDLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKEAVR 260
Query: 111 GVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIPAIREGKMVYVEDIAEGLEKISRNC 170
G N L+ R R+EG + DY + + L+ + + EGK+ EDI EGLE
Sbjct: 261 GPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETL 320
Query: 171 YTL 173
L
Sbjct: 321 LKL 323
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 107 bits (266), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 101/181 (55%), Gaps = 26/181 (14%)
Query: 8 IILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE--------------- 52
++ VC K GE V VSAA+GAVG +VGQ AKL GC VVG+AGS E
Sbjct: 137 LLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFN 196
Query: 53 -KEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNL--EKP 109
K L+ ALK+ P G D YF+NVGG+ L+ VL M+ G+IA+ IS YN + P
Sbjct: 197 YKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLP 256
Query: 110 EGVHNLEQLIGKRIRLEGFLA----GDYYHLYLKFLELVIPAIREGKMVYVEDIAEGLEK 165
G + E +I K++R+EGF+ GD K L ++ + EGK+ Y E + +G E
Sbjct: 257 PG-PSPESIIYKQLRIEGFIVYRWQGDVRE---KALRDLMKWVLEGKIQYHEHVTKGFEN 312
Query: 166 I 166
+
Sbjct: 313 M 313
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 90/177 (50%), Gaps = 24/177 (13%)
Query: 11 VCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE----------------KE 54
+C K GE V V+AA+GAVG +VGQ AKL GC VVG+ GS E K
Sbjct: 156 ICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKLGFDVVFNYKT 215
Query: 55 EPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYN-LEKPEGVH 113
L+ LK+ P G D YF+NVGG+ + V+ M+ GRIA+ IS YN
Sbjct: 216 VESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGP 275
Query: 114 NLEQLIGKRIRLEGFLA----GDYYHLYLKFLELVIPAIREGKMVYVEDIAEGLEKI 166
E +I + +R+E F+ GD LK L + + EGK+ Y E I EG E +
Sbjct: 276 PPEIVIYQELRMEAFVVYRWQGDARQKALKDL---LKWVLEGKIQYKEYIIEGFENM 329
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 90/177 (50%), Gaps = 24/177 (13%)
Query: 11 VCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE----------------KE 54
+C K GE V V+AA+GAVG +VGQ AKL GC VVG+ GS E K
Sbjct: 135 ICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKLGFDVVFNYKT 194
Query: 55 EPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYN-LEKPEGVH 113
L+ LK+ P G D YF+NVGG+ + V+ M+ GRIA+ IS YN
Sbjct: 195 VESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGP 254
Query: 114 NLEQLIGKRIRLEGFLA----GDYYHLYLKFLELVIPAIREGKMVYVEDIAEGLEKI 166
E +I + +R+E F+ GD LK L + + EGK+ Y E I EG E +
Sbjct: 255 PPEIVIYQELRMEAFVVYRWQGDARQKALKDL---LKWVLEGKIQYKEYIIEGFENM 308
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 33/184 (17%)
Query: 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKE----------------EPDL 58
+G+ V V+AA+G GQ Q +K A C+V+G+ S EK EP +
Sbjct: 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEP-V 220
Query: 59 DAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLE-- 116
LK+ +P+G+D+ +E+VGG M D + + +GR+ V IS Y + P G+ ++
Sbjct: 221 GTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGY--QTPTGLSPVKAG 278
Query: 117 ----QLIGKRIRLEGFLAGDYYHLYLKFLELVIPAIREGKMVYVEDIAE--------GLE 164
+L+ K ++GF Y Y + ++ G +V D+ + GLE
Sbjct: 279 TLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLE 338
Query: 165 KISR 168
I R
Sbjct: 339 SIFR 342
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 33/184 (17%)
Query: 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKE----------------EPDL 58
+G+ V V+AA+G GQ Q +K A C+V+G+ S EK EP +
Sbjct: 141 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEP-V 199
Query: 59 DAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLE-- 116
LK+ +P+G+D+ +E+VGG M D + + +GR+ V IS Y + P G+ ++
Sbjct: 200 GTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGY--QTPTGLSPVKAG 257
Query: 117 ----QLIGKRIRLEGFLAGDYYHLYLKFLELVIPAIREGKMVYVEDIAE--------GLE 164
+L+ K ++GF Y Y + ++ G +V D+ + GLE
Sbjct: 258 TLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLE 317
Query: 165 KISR 168
I R
Sbjct: 318 SIFR 321
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 33/184 (17%)
Query: 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKE----------------EPDL 58
+G+ V V+AA+G GQ Q +K A C+V+G+ S EK EP +
Sbjct: 170 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEP-V 228
Query: 59 DAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLE-- 116
LK+ +P+G+D+ +E+VGG M D + + +GR+ V IS Y + P G+ ++
Sbjct: 229 GTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGY--QTPTGLSPVKAG 286
Query: 117 ----QLIGKRIRLEGFLAGDYYHLYLKFLELVIPAIREGKMVYVEDIAE--------GLE 164
+L+ K ++GF Y Y + ++ G +V D+ + GLE
Sbjct: 287 TLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLE 346
Query: 165 KISR 168
I R
Sbjct: 347 SIFR 350
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 22 VSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK-----EEPDLDAA-----------LKR 64
VS A+GA G + GQ GC VVG G+ EK E DAA L+
Sbjct: 161 VSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRE 220
Query: 65 WFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLE---KPEGVHNLEQLIGK 121
P G+D+YF+NVGG + D V+ M I + ISQYN + P +E + +
Sbjct: 221 SCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKE 280
Query: 122 R-IRLEGFLAGDYYHLYLKFLELVIPAIREGKMVYVEDIAEGLEKI 166
R I E FL +Y + + + +EGK+ E + GLE +
Sbjct: 281 RNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENM 326
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 22 VSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK-----EEPDLDAA-----------LKR 64
VS A+GA G + GQ GC VVG G+ EK E DAA L+
Sbjct: 166 VSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRE 225
Query: 65 WFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLE---KPEGVHNLEQLIGK 121
P G+D+YF+NVGG + D V+ M I + ISQYN + P +E + +
Sbjct: 226 SCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKE 285
Query: 122 R-IRLEGFLAGDYYHLYLKFLELVIPAIREGKMVYVEDIAEGLEKI 166
R I E FL +Y + + + +EGK+ E + GLE +
Sbjct: 286 RNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENM 331
>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph
Length = 353
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 21/175 (12%)
Query: 13 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK-----EEPDLDAA----- 61
S + + VS A+GA G L GQ L GC VVG G++EK E DAA
Sbjct: 153 SAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKT 212
Query: 62 ------LKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLE---KPEGV 112
L+ P G+D+YF+NVGG + +AV+ M I + ISQY+ + P
Sbjct: 213 GNVAEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDVPYPPPLP 272
Query: 113 HNLEQLIGKR-IRLEGFLAGDYYHLYLKFLELVIPAIREGKMVYVEDIAEGLEKI 166
+E + +R I E F +Y + + + +EGK+ E +A+GLE +
Sbjct: 273 PAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWFKEGKLKVKETMAKGLENM 327
>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent
Oxidoreductase From Mus Musculus At 2.10 A Resolution
Length = 363
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 13 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK-----EEPDLDAA----- 61
S + VS A+GA G L GQ L GC VVG G++EK E DAA
Sbjct: 163 SAGSNQTXVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKT 222
Query: 62 ------LKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLE---KPEGV 112
L+ P G+D+YF+NVGG + + V+ I + ISQYN + P
Sbjct: 223 GNVAEQLREACPGGVDVYFDNVGGDISNTVISQXNENSHIILCGQISQYNKDVPYPPPLP 282
Query: 113 HNLEQLIGKR-IRLEGFLAGDYYHLYLKFLELVIPAIREGKMVYVEDIAEGLEK 165
+E + +R I E F +Y + + + +EGK+ E +A+GLE
Sbjct: 283 PAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWFKEGKLKVKETVAKGLEN 336
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 16/95 (16%)
Query: 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----------------EEPDL 58
KKG+YV + AA+G VG ++ Q K+ G + + A + EK +E L
Sbjct: 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDIL 206
Query: 59 DAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRG 93
LK +G+D F++VG + L ++ +G
Sbjct: 207 RQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKG 241
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 16/98 (16%)
Query: 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEP---------------DLD 59
K G+YV + AA+G +G ++ +A+ G V+G+ ++EK E D
Sbjct: 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFA 203
Query: 60 AALKRWF-PQGIDIYFENVGGKMLDAVLLNMRLRGRIA 96
++ +G+D+ ++++G L L +R RG A
Sbjct: 204 EVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCA 241
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 35.4 bits (80), Expect = 0.020, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYF 74
+ GE V + + SG VGQ A GC V + GS EK A L+ FPQ + F
Sbjct: 1666 QPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKR-----AYLQARFPQLDETCF 1720
Query: 75 EN 76
N
Sbjct: 1721 AN 1722
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 27/168 (16%)
Query: 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLD 59
+ G+ V V AA V Q AKL G V+ +AGS++K PD
Sbjct: 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWP 224
Query: 60 AALKRWF-PQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQL 118
++R +G D ++ G + V+ GRIA++ S Y EG +
Sbjct: 225 KEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGY-----EGTLPFAHV 279
Query: 119 IGKRIRLEGFLAGDYYHLY--LKFLE--LVIPAIREGKMVYVEDIAEG 162
+++ + G L+ L+F+E + P + G+++ +E AEG
Sbjct: 280 FYRQLSILGSTMASKSRLFPILRFVEEGKLKPVV--GQVLPLEAAAEG 325
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEE 55
K GE V V ASG VG Q A+ G ++G+AG++E ++
Sbjct: 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK 209
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 19/128 (14%)
Query: 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEP---------------DLD 59
+GE V + + +G Q A+ G V +AGS K E D
Sbjct: 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFA 225
Query: 60 AALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLI 119
A +K QG+DI + +G + + ++ G +++ + + EK NL +
Sbjct: 226 AVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAVAEK----VNLSPIX 281
Query: 120 GKRIRLEG 127
KR+ + G
Sbjct: 282 VKRLTVTG 289
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEE 55
G +V +S A+G +G L Q+AK G V+G G + KEE
Sbjct: 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEE 208
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 31.2 bits (69), Expect = 0.36, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 15 KKGEYVYVSAASGA---VGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWF 66
K GE ++V +A G+ L +AK+ GCY S G+ + D + W+
Sbjct: 160 KDGELLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWY 214
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 31.2 bits (69), Expect = 0.37, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 15 KKGEYVYVSAASGA---VGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWF 66
K GE ++V +A G+ L +AK+ GCY S G+ + D + W+
Sbjct: 161 KDGELLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWY 215
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 30.8 bits (68), Expect = 0.38, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 15 KKGEYVYVSAASGA---VGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWF 66
K GE ++V +A G+ L +AK+ GCY S G+ + D + W+
Sbjct: 161 KDGELLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWY 215
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 30.8 bits (68), Expect = 0.39, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 15 KKGEYVYVSAASGA---VGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWF 66
K GE ++V +A G+ L +AK+ GCY S G+ + D + W+
Sbjct: 161 KDGELLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWY 215
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 16/120 (13%)
Query: 6 NLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE------------- 52
L+ LV + + G+YV + A VG Q ++AG + +AGS++
Sbjct: 152 QLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAG 211
Query: 53 ---KEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKP 109
K+E +A LK G+++ + +GG + + + L GR + ++ ++ P
Sbjct: 212 FNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGP 271
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 16/120 (13%)
Query: 6 NLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE------------- 52
L+ LV + + G+YV + A VG Q ++AG + +AGS++
Sbjct: 136 QLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAG 195
Query: 53 ---KEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKP 109
K+E +A LK G+++ + +GG + + + L GR + ++ ++ P
Sbjct: 196 FNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGP 255
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 30.0 bits (66), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEE 55
GE V + +A+G VG AK+ G + +AGS K E
Sbjct: 39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE 77
>pdb|3MF0|A Chain A, Crystal Structure Of Pde5a Gaf Domain (89-518)
pdb|3MF0|B Chain B, Crystal Structure Of Pde5a Gaf Domain (89-518)
Length = 432
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 9/58 (15%)
Query: 123 IRLEGFLAGDYYHLYLKFLELVIPAIREGKMVYVE--DIAEG--LEKISRNCYTLKWR 176
+ + G ++ D Y L+L V K + D+AEG LE++S NC L+W
Sbjct: 86 LHIHGLISADRYSLFL-----VCEDSSNDKFLISRLFDVAEGSTLEEVSNNCIRLEWN 138
>pdb|3LFV|A Chain A, Crystal Structure Of Unliganded Pde5a Gaf Domain
pdb|3LFV|B Chain B, Crystal Structure Of Unliganded Pde5a Gaf Domain
Length = 431
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 9/58 (15%)
Query: 123 IRLEGFLAGDYYHLYLKFLELVIPAIREGKMVYVE--DIAEG--LEKISRNCYTLKWR 176
+ + G ++ D Y L+L V K + D+AEG LE++S NC L+W
Sbjct: 85 LHIHGLISADRYSLFL-----VCEDSSNDKFLISRLFDVAEGSTLEEVSNNCIRLEWN 137
>pdb|3BJC|A Chain A, Crystal Structure Of The Pde5a Catalytic Domain In Complex
With A Novel Inhibitor
Length = 878
Score = 28.9 bits (63), Expect = 1.8, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 21/63 (33%)
Query: 123 IRLEGFLAGDYYHLYL--------KFLELVIPAIREGKMVYVEDIAEG--LEKISRNCYT 172
+ + G ++ D Y L+L KFL + + D+AEG LE++S NC
Sbjct: 177 LHIHGLISADRYSLFLVCEDSSNDKFL-----------ISRLFDVAEGSTLEEVSNNCIR 225
Query: 173 LKW 175
L+W
Sbjct: 226 LEW 228
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 48/117 (41%), Gaps = 21/117 (17%)
Query: 13 SPKKGEYVYVSAASGAVGQL-VGQFAKLAGCYVVGSAGSKEKEEPDL------------D 59
+P++G V V+ A+G VG L V AK Y V ++ K E L D
Sbjct: 147 TPERGP-VLVTGATGGVGSLAVSXLAKRG--YTVEASTGKAAEHDYLRVLGAKEVLARED 203
Query: 60 AALKRWFP---QGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVH 113
+R P Q + VGG+ L VL R G +AVS + E P VH
Sbjct: 204 VXAERIRPLDKQRWAAAVDPVGGRTLATVLSRXRYGGAVAVSGLTG--GAEVPTTVH 258
>pdb|1MDW|A Chain A, Crystal Structure Of Calcium-bound Protease Core Of
Calpain Ii Reveals The Basis For Intrinsic Inactivation
pdb|1MDW|B Chain B, Crystal Structure Of Calcium-bound Protease Core Of
Calpain Ii Reveals The Basis For Intrinsic Inactivation
Length = 328
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 15 KKGEYVYVSAASGA---VGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWF 66
K GE ++V +A G+ L +AK+ GCY S G+ + D + W+
Sbjct: 143 KDGELLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWY 197
>pdb|3B9Q|A Chain A, The Crystal Structure Of Cpftsy From Arabidopsis Thaliana
Length = 302
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 36 FAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKM 81
+A+ GC +V + G K K L A+KR +G D+ + G++
Sbjct: 150 WAERTGCEIVVAEGDKAKAATVLSKAVKRGKEEGYDVVLCDTSGRL 195
>pdb|3KSK|A Chain A, Crystal Structure Of Single Chain Pvuii
pdb|3KSK|B Chain B, Crystal Structure Of Single Chain Pvuii
Length = 324
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 14/57 (24%)
Query: 41 GCYVVGSAGSKEKEEPDLDAALKRW----------FPQGIDIYFENVGGKMLDAVLL 87
G + GS GS PDL+ L+ W GI+ F++ GGK+L +L+
Sbjct: 152 GTKIYGSGGS----HPDLNKLLELWPHIQEYQDLALKHGINDIFQDNGGKLLQVLLI 204
>pdb|2OG2|A Chain A, Crystal Structure Of Chloroplast Ftsy From Arabidopsis
Thaliana
Length = 359
Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 36 FAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKM 81
+A+ GC +V + G K K L A+KR +G D+ + G++
Sbjct: 207 WAERTGCEIVVAEGDKAKAATVLSKAVKRGKEEGYDVVLCDTSGRL 252
>pdb|2K31|A Chain A, Solution Structure Of Cgmp-Binding Gaf Domain Of
Phosphodiesterase 5
Length = 176
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 9/58 (15%)
Query: 123 IRLEGFLAGDYYHLYLKFLELVIPAIREGKMVYVE--DIAEG--LEKISRNCYTLKWR 176
+ + G ++ D Y L+L V + K + D+AEG LE+ S NC L+W
Sbjct: 12 LHIHGLISADRYSLFL-----VCEDSSKDKFLISRLFDVAEGSTLEEASNNCIRLEWN 64
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 26.9 bits (58), Expect = 5.4, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 14/94 (14%)
Query: 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG---------SKEKEEPDLDAALKRW 65
+ GE + V +A+G VG Q A+ G V +A S+E ++
Sbjct: 344 RPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAVELSREHLASSRTCDFEQQ 403
Query: 66 F-----PQGIDIYFENVGGKMLDAVLLNMRLRGR 94
F +G+D+ ++ G+ DA L + GR
Sbjct: 404 FLGATGGRGVDVVLNSLAGEFADASLRMLPRGGR 437
>pdb|1ATG|A Chain A, Azotobacter Vinelandii Periplasmic Molybdate-Binding
Protein
Length = 231
Score = 26.6 bits (57), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 27 GAVGQLVGQFAKLAGCYVVGSAGSK 51
G + QL GQFAK G VV S+GS
Sbjct: 12 GTLEQLAGQFAKQTGHAVVISSGSS 36
>pdb|3LQ1|A Chain A, Crystal Structure Of
2-Succinyl-6-Hydroxy-2,4-Cyclohexadiene 1-Carboxylic
Acid Synthase2-Oxoglutarate Decarboxylase From Listeria
Monocytogenes Str. 4b F2365
pdb|3LQ1|B Chain B, Crystal Structure Of
2-Succinyl-6-Hydroxy-2,4-Cyclohexadiene 1-Carboxylic
Acid Synthase2-Oxoglutarate Decarboxylase From Listeria
Monocytogenes Str. 4b F2365
Length = 578
Score = 26.6 bits (57), Expect = 8.0, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFP 67
Y + ++ ++V + G +VVG KE E+P +D A K +P
Sbjct: 204 YTHEVLDDSSIQKMVTECTGKKGVFVVGPIDKKELEQPMVDLAKKLGWP 252
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 26.6 bits (57), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEE 55
K+G+ V + ASG +G QFA G + S +K E
Sbjct: 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAE 267
>pdb|3O1K|A Chain A, Crystal Structure Of Putative Dihydroneopterin Aldolase
(Folb) From Vibrio Cholerae O1 Biovar El Tor Str. N16961
pdb|3O1K|B Chain B, Crystal Structure Of Putative Dihydroneopterin Aldolase
(Folb) From Vibrio Cholerae O1 Biovar El Tor Str. N16961
pdb|3O1K|C Chain C, Crystal Structure Of Putative Dihydroneopterin Aldolase
(Folb) From Vibrio Cholerae O1 Biovar El Tor Str. N16961
pdb|3O1K|D Chain D, Crystal Structure Of Putative Dihydroneopterin Aldolase
(Folb) From Vibrio Cholerae O1 Biovar El Tor Str. N16961
Length = 132
Score = 26.6 bits (57), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 92 RGRIAVSSI-ISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHL-----------YLK 139
R R+++ + I Q + GV++ EQ I +++ L+ +A D Y +
Sbjct: 11 RKRLSMDKVFIEQLEVITTIGVYDWEQQIKQKLVLDLEMAHDNRAAGKSDDVADALDYAQ 70
Query: 140 FLELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKW 175
+ V+ I +G+ + VE +AE + ++ + + W
Sbjct: 71 VSQAVLEHIEQGRFLLVERVAEEVAELIMTRFAVPW 106
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 26.2 bits (56), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEE 55
K+G+ V + ASG +G QFA G + S +K E
Sbjct: 245 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAE 285
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.141 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,372,881
Number of Sequences: 62578
Number of extensions: 221215
Number of successful extensions: 540
Number of sequences better than 100.0: 54
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 483
Number of HSP's gapped (non-prelim): 57
length of query: 180
length of database: 14,973,337
effective HSP length: 93
effective length of query: 87
effective length of database: 9,153,583
effective search space: 796361721
effective search space used: 796361721
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)