Query 041355
Match_columns 180
No_of_seqs 121 out of 1770
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 06:17:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041355.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041355hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1197 Predicted quinone oxid 100.0 1.6E-27 3.5E-32 166.2 15.8 171 2-177 132-321 (336)
2 COG0604 Qor NADPH:quinone redu 100.0 3.1E-26 6.8E-31 171.2 19.0 166 2-171 128-310 (326)
3 COG2130 Putative NADP-dependen 99.9 2.7E-26 5.9E-31 163.8 16.9 178 2-179 136-331 (340)
4 PLN03154 putative allyl alcoho 99.9 8.6E-26 1.9E-30 171.0 19.7 176 2-177 144-336 (348)
5 COG1064 AdhP Zn-dependent alco 99.9 9.1E-25 2E-29 160.9 16.9 161 2-177 153-328 (339)
6 cd08294 leukotriene_B4_DH_like 99.9 8E-24 1.7E-28 159.0 19.5 176 2-177 129-320 (329)
7 KOG1196 Predicted NAD-dependen 99.9 4E-24 8.6E-29 152.4 16.0 178 2-179 139-333 (343)
8 cd08295 double_bond_reductase_ 99.9 1.3E-23 2.9E-28 158.5 19.4 176 2-177 137-329 (338)
9 TIGR02825 B4_12hDH leukotriene 99.9 1.1E-23 2.3E-28 158.3 18.7 176 2-177 124-317 (325)
10 COG1062 AdhC Zn-dependent alco 99.9 3E-23 6.6E-28 150.8 14.5 168 2-177 171-358 (366)
11 cd08281 liver_ADH_like1 Zinc-d 99.9 1.2E-22 2.7E-27 155.1 17.8 169 2-177 177-364 (371)
12 KOG1198 Zinc-binding oxidoredu 99.9 4.2E-23 9.1E-28 154.8 14.2 172 2-176 137-335 (347)
13 TIGR03451 mycoS_dep_FDH mycoth 99.9 2.7E-22 5.9E-27 152.6 18.1 168 2-176 162-349 (358)
14 KOG1202 Animal-type fatty acid 99.9 6.3E-23 1.4E-27 167.1 14.1 172 1-177 1537-1732(2376)
15 cd08293 PTGR2 Prostaglandin re 99.9 7.3E-22 1.6E-26 149.4 19.1 176 2-177 138-336 (345)
16 KOG0022 Alcohol dehydrogenase, 99.9 1.5E-21 3.2E-26 140.3 15.2 168 2-177 178-367 (375)
17 cd08291 ETR_like_1 2-enoyl thi 99.9 4.4E-21 9.5E-26 144.1 17.7 169 2-177 130-316 (324)
18 KOG0024 Sorbitol dehydrogenase 99.9 2.3E-21 5E-26 140.0 15.3 164 1-177 155-342 (354)
19 PLN02827 Alcohol dehydrogenase 99.9 5E-21 1.1E-25 146.5 17.9 167 2-177 179-368 (378)
20 PRK09880 L-idonate 5-dehydroge 99.9 4.1E-21 8.9E-26 145.3 17.1 159 2-176 156-333 (343)
21 cd08239 THR_DH_like L-threonin 99.9 7.2E-21 1.6E-25 143.7 18.1 161 2-176 150-330 (339)
22 PLN02740 Alcohol dehydrogenase 99.9 1.1E-20 2.4E-25 144.8 18.3 167 2-176 184-372 (381)
23 PRK10309 galactitol-1-phosphat 99.9 5.7E-21 1.2E-25 144.7 16.5 169 3-177 148-337 (347)
24 COG1063 Tdh Threonine dehydrog 99.9 1E-20 2.2E-25 143.2 17.0 168 1-178 153-341 (350)
25 cd08292 ETR_like_2 2-enoyl thi 99.9 2.7E-20 5.9E-25 139.5 19.3 169 2-176 126-315 (324)
26 TIGR03201 dearomat_had 6-hydro 99.9 1.9E-20 4.2E-25 142.0 18.2 162 2-177 153-340 (349)
27 PLN02586 probable cinnamyl alc 99.9 3.2E-20 6.9E-25 141.3 19.2 161 2-177 169-344 (360)
28 TIGR02818 adh_III_F_hyde S-(hy 99.9 2.4E-20 5.2E-25 142.4 17.7 167 2-176 171-359 (368)
29 cd08300 alcohol_DH_class_III c 99.9 3.2E-20 7E-25 141.7 18.4 167 2-176 172-360 (368)
30 cd08301 alcohol_DH_plants Plan 99.9 3.5E-20 7.6E-25 141.5 18.6 168 2-177 173-362 (369)
31 cd08277 liver_alcohol_DH_like 99.9 3.8E-20 8.3E-25 141.1 17.9 166 2-176 170-357 (365)
32 KOG0025 Zn2+-binding dehydroge 99.9 3.6E-20 7.8E-25 131.7 15.9 167 2-173 146-338 (354)
33 PLN02178 cinnamyl-alcohol dehy 99.9 1.1E-19 2.5E-24 138.8 19.1 161 2-177 163-339 (375)
34 cd08233 butanediol_DH_like (2R 99.9 6.3E-20 1.4E-24 139.2 17.5 163 2-177 159-342 (351)
35 KOG0023 Alcohol dehydrogenase, 99.9 5.5E-20 1.2E-24 132.7 15.6 160 3-177 169-345 (360)
36 cd05288 PGDH Prostaglandin deh 99.9 1.6E-19 3.5E-24 135.7 18.6 176 2-177 131-322 (329)
37 TIGR01202 bchC 2-desacetyl-2-h 99.9 4.8E-20 1E-24 137.6 15.3 161 2-176 132-299 (308)
38 PLN02514 cinnamyl-alcohol dehy 99.8 1.4E-19 3E-24 137.7 17.7 161 2-177 166-341 (357)
39 TIGR02822 adh_fam_2 zinc-bindi 99.8 1.2E-19 2.6E-24 136.6 16.7 161 2-177 152-321 (329)
40 cd05282 ETR_like 2-enoyl thioe 99.8 5.1E-19 1.1E-23 132.5 19.7 171 2-177 124-315 (323)
41 cd08244 MDR_enoyl_red Possible 99.8 5.4E-19 1.2E-23 132.5 19.3 170 2-177 129-315 (324)
42 cd08290 ETR 2-enoyl thioester 99.8 8.5E-19 1.8E-23 132.5 19.1 171 2-177 132-332 (341)
43 cd08274 MDR9 Medium chain dehy 99.8 6E-19 1.3E-23 133.7 18.2 163 2-176 164-340 (350)
44 cd08231 MDR_TM0436_like Hypoth 99.8 3.9E-19 8.5E-24 135.4 16.8 166 2-177 163-353 (361)
45 cd08238 sorbose_phosphate_red 99.8 4.8E-19 1E-23 137.0 17.0 157 10-174 169-357 (410)
46 TIGR02819 fdhA_non_GSH formald 99.8 8.4E-19 1.8E-23 134.8 18.2 168 2-176 172-381 (393)
47 TIGR03366 HpnZ_proposed putati 99.8 2.4E-19 5.3E-24 132.1 14.6 154 2-166 107-280 (280)
48 cd08243 quinone_oxidoreductase 99.8 1E-18 2.3E-23 130.5 18.1 169 2-177 128-312 (320)
49 cd08237 ribitol-5-phosphate_DH 99.8 4E-19 8.6E-24 134.4 15.1 161 2-174 147-328 (341)
50 cd08246 crotonyl_coA_red croto 99.8 1.4E-18 3.1E-23 133.8 18.3 165 2-176 177-382 (393)
51 cd08230 glucose_DH Glucose deh 99.8 8E-19 1.7E-23 133.4 15.6 151 13-176 169-347 (355)
52 cd05286 QOR2 Quinone oxidoredu 99.8 4.9E-18 1.1E-22 126.5 19.2 170 2-176 122-310 (320)
53 cd08250 Mgc45594_like Mgc45594 99.8 4.3E-18 9.4E-23 128.0 18.8 174 2-176 125-320 (329)
54 cd08269 Zn_ADH9 Alcohol dehydr 99.8 3.4E-18 7.5E-23 127.5 17.7 169 2-178 116-304 (312)
55 cd08285 NADP_ADH NADP(H)-depen 99.8 2.7E-18 5.8E-23 130.3 17.1 166 2-177 153-341 (351)
56 PTZ00354 alcohol dehydrogenase 99.8 8E-18 1.7E-22 126.6 19.2 171 2-176 126-318 (334)
57 TIGR01751 crot-CoA-red crotony 99.8 1.3E-17 2.8E-22 128.6 18.4 166 2-177 173-378 (398)
58 cd08278 benzyl_alcohol_DH Benz 99.8 1.2E-17 2.6E-22 127.4 18.0 168 2-176 172-357 (365)
59 PRK10754 quinone oxidoreductas 99.8 2.3E-17 5E-22 124.0 18.9 169 2-177 126-318 (327)
60 cd08296 CAD_like Cinnamyl alco 99.8 1.9E-17 4.2E-22 124.8 18.5 160 2-177 150-325 (333)
61 PRK13771 putative alcohol dehy 99.8 2.1E-17 4.5E-22 124.6 18.5 163 2-176 149-323 (334)
62 cd08289 MDR_yhfp_like Yhfp put 99.8 2.3E-17 5.1E-22 123.8 18.1 171 2-177 129-317 (326)
63 cd08297 CAD3 Cinnamyl alcohol 99.8 3.4E-17 7.4E-22 123.8 19.0 164 2-177 152-332 (341)
64 cd08263 Zn_ADH10 Alcohol dehyd 99.8 2.4E-17 5.1E-22 125.9 18.0 167 2-177 173-359 (367)
65 cd05285 sorbitol_DH Sorbitol d 99.8 2.1E-17 4.5E-22 125.1 17.6 163 2-178 149-334 (343)
66 cd05279 Zn_ADH1 Liver alcohol 99.8 2.4E-17 5.3E-22 125.8 18.0 167 2-176 169-357 (365)
67 TIGR02823 oxido_YhdH putative 99.8 4.4E-17 9.4E-22 122.3 19.0 169 3-177 129-314 (323)
68 cd08283 FDH_like_1 Glutathione 99.8 3.1E-17 6.7E-22 126.0 18.5 164 2-177 171-376 (386)
69 cd08260 Zn_ADH6 Alcohol dehydr 99.8 4.4E-17 9.6E-22 123.4 18.9 167 2-177 151-336 (345)
70 cd08240 6_hydroxyhexanoate_dh_ 99.8 4.5E-17 9.7E-22 123.6 18.3 164 2-177 161-341 (350)
71 TIGR02817 adh_fam_1 zinc-bindi 99.8 4.9E-17 1.1E-21 122.6 18.4 167 2-177 129-326 (336)
72 cd08270 MDR4 Medium chain dehy 99.8 2.1E-17 4.6E-22 122.9 16.1 169 2-177 119-296 (305)
73 cd08251 polyketide_synthase po 99.8 6E-17 1.3E-21 120.0 18.5 170 2-177 107-296 (303)
74 cd08261 Zn_ADH7 Alcohol dehydr 99.8 4.8E-17 1E-21 122.8 18.2 162 2-176 146-326 (337)
75 cd08284 FDH_like_2 Glutathione 99.8 4.4E-17 9.4E-22 123.3 17.6 163 2-176 154-335 (344)
76 cd08265 Zn_ADH3 Alcohol dehydr 99.8 3.6E-17 7.8E-22 125.6 17.3 164 2-176 188-376 (384)
77 cd05284 arabinose_DH_like D-ar 99.8 6.2E-17 1.4E-21 122.3 18.2 162 2-177 152-331 (340)
78 cd05276 p53_inducible_oxidored 99.8 1.2E-16 2.5E-21 119.3 19.1 171 2-177 125-316 (323)
79 cd08276 MDR7 Medium chain dehy 99.8 1.1E-16 2.3E-21 120.5 18.9 165 2-177 146-327 (336)
80 cd08286 FDH_like_ADH2 formalde 99.8 7.5E-17 1.6E-21 122.1 18.1 162 2-176 152-333 (345)
81 cd08266 Zn_ADH_like1 Alcohol d 99.8 1.4E-16 2.9E-21 120.0 19.4 166 2-177 152-333 (342)
82 cd08253 zeta_crystallin Zeta-c 99.8 1.1E-16 2.5E-21 119.5 18.6 169 2-176 130-315 (325)
83 cd05280 MDR_yhdh_yhfp Yhdh and 99.8 1.1E-16 2.3E-21 120.1 18.3 170 2-177 129-316 (325)
84 cd08279 Zn_ADH_class_III Class 99.8 1.1E-16 2.4E-21 122.1 18.4 168 2-176 168-355 (363)
85 cd08235 iditol_2_DH_like L-idi 99.8 9.3E-17 2E-21 121.4 17.8 165 2-177 152-336 (343)
86 cd08241 QOR1 Quinone oxidoredu 99.8 2E-16 4.3E-21 118.1 19.3 170 2-176 125-314 (323)
87 TIGR02824 quinone_pig3 putativ 99.8 2E-16 4.3E-21 118.2 19.0 170 2-176 125-315 (325)
88 cd08256 Zn_ADH2 Alcohol dehydr 99.8 1.1E-16 2.3E-21 121.6 17.4 162 2-177 161-343 (350)
89 cd08236 sugar_DH NAD(P)-depend 99.8 1.3E-16 2.9E-21 120.7 17.6 168 2-175 146-333 (343)
90 cd08264 Zn_ADH_like2 Alcohol d 99.8 1.4E-16 3.1E-21 119.6 17.5 162 2-177 149-319 (325)
91 cd08259 Zn_ADH5 Alcohol dehydr 99.8 2.1E-16 4.6E-21 118.7 18.2 163 2-177 149-324 (332)
92 cd05278 FDH_like Formaldehyde 99.8 1.1E-16 2.4E-21 121.2 16.6 163 2-176 154-336 (347)
93 cd08282 PFDH_like Pseudomonas 99.8 1.8E-16 4E-21 121.4 17.9 168 2-176 163-366 (375)
94 cd08254 hydroxyacyl_CoA_DH 6-h 99.7 2.3E-16 5E-21 118.9 17.7 162 2-177 151-329 (338)
95 cd05195 enoyl_red enoyl reduct 99.7 4.5E-16 9.8E-21 114.4 18.8 171 2-177 94-286 (293)
96 cd08287 FDH_like_ADH3 formalde 99.7 2.5E-16 5.5E-21 119.2 17.8 162 2-176 155-336 (345)
97 smart00829 PKS_ER Enoylreducta 99.7 5.8E-16 1.3E-20 113.7 18.6 171 2-177 90-281 (288)
98 cd08268 MDR2 Medium chain dehy 99.7 6.5E-16 1.4E-20 115.6 18.9 171 2-177 130-319 (328)
99 cd08252 AL_MDR Arginate lyase 99.7 7.1E-16 1.5E-20 116.3 19.0 168 2-177 130-328 (336)
100 cd08273 MDR8 Medium chain dehy 99.7 3E-16 6.4E-21 118.0 16.8 171 2-177 125-323 (331)
101 cd08272 MDR6 Medium chain dehy 99.7 7.7E-16 1.7E-20 115.2 18.7 164 2-176 130-316 (326)
102 cd08249 enoyl_reductase_like e 99.7 2.9E-16 6.2E-21 118.8 16.4 163 2-177 130-329 (339)
103 PRK10083 putative oxidoreducta 99.7 4.9E-16 1.1E-20 117.4 17.5 158 3-176 148-326 (339)
104 PRK09422 ethanol-active dehydr 99.7 1.3E-15 2.8E-20 115.0 18.5 161 2-177 149-327 (338)
105 cd08299 alcohol_DH_class_I_II_ 99.7 8.1E-16 1.8E-20 117.7 17.6 167 2-176 176-364 (373)
106 cd08242 MDR_like Medium chain 99.7 2.8E-16 6.2E-21 117.7 14.5 155 5-176 144-310 (319)
107 PF00107 ADH_zinc_N: Zinc-bind 99.7 1.3E-16 2.9E-21 104.5 11.1 112 28-149 1-129 (130)
108 cd08255 2-desacetyl-2-hydroxye 99.7 2.5E-16 5.5E-21 115.7 13.7 167 2-176 84-268 (277)
109 cd08262 Zn_ADH8 Alcohol dehydr 99.7 1.6E-15 3.5E-20 114.6 18.4 163 2-177 148-333 (341)
110 cd08288 MDR_yhdh Yhdh putative 99.7 2E-15 4.4E-20 113.2 18.4 160 12-177 141-315 (324)
111 cd05283 CAD1 Cinnamyl alcohol 99.7 1.8E-15 3.9E-20 114.3 17.6 162 2-177 156-329 (337)
112 TIGR00692 tdh L-threonine 3-de 99.7 1.4E-15 3.1E-20 115.0 17.0 163 2-177 149-332 (340)
113 cd08234 threonine_DH_like L-th 99.7 3.9E-15 8.4E-20 112.2 17.9 161 2-175 146-325 (334)
114 cd08275 MDR3 Medium chain dehy 99.7 8.2E-15 1.8E-19 110.3 18.9 174 2-176 124-327 (337)
115 cd05289 MDR_like_2 alcohol deh 99.7 5.6E-15 1.2E-19 109.7 17.4 157 2-177 130-302 (309)
116 PLN02702 L-idonate 5-dehydroge 99.7 6.2E-15 1.3E-19 112.5 17.8 161 3-177 169-355 (364)
117 cd05281 TDH Threonine dehydrog 99.7 6E-15 1.3E-19 111.6 17.0 160 3-176 152-332 (341)
118 cd08271 MDR5 Medium chain dehy 99.7 1.8E-14 3.9E-19 107.9 18.5 165 2-176 127-315 (325)
119 PRK05396 tdh L-threonine 3-deh 99.7 9.3E-15 2E-19 110.6 17.1 152 14-176 161-331 (341)
120 cd08247 AST1_like AST1 is a cy 99.7 4E-15 8.6E-20 113.0 14.8 175 2-177 136-343 (352)
121 cd08248 RTN4I1 Human Reticulon 99.7 2.6E-15 5.7E-20 113.8 13.8 170 2-177 144-342 (350)
122 cd08258 Zn_ADH4 Alcohol dehydr 99.7 2.1E-14 4.5E-19 107.2 17.5 139 2-151 150-306 (306)
123 cd08232 idonate-5-DH L-idonate 99.7 1.9E-14 4.2E-19 108.7 17.3 159 2-176 152-329 (339)
124 cd08245 CAD Cinnamyl alcohol d 99.7 2.9E-14 6.4E-19 107.3 18.0 158 2-176 149-322 (330)
125 cd08298 CAD2 Cinnamyl alcohol 99.6 1.4E-14 3E-19 109.0 14.9 160 2-177 154-322 (329)
126 cd08267 MDR1 Medium chain dehy 99.6 4.6E-14 9.9E-19 105.4 16.7 164 2-177 129-312 (319)
127 cd05188 MDR Medium chain reduc 99.5 4.3E-13 9.4E-18 97.8 14.4 124 2-132 120-260 (271)
128 cd00401 AdoHcyase S-adenosyl-L 99.4 5.2E-12 1.1E-16 96.8 14.1 158 4-176 188-365 (413)
129 PF13602 ADH_zinc_N_2: Zinc-bi 99.3 2.8E-12 6E-17 83.6 4.3 99 67-177 17-120 (127)
130 PRK09424 pntA NAD(P) transhydr 99.2 2.4E-10 5.2E-15 89.8 12.7 133 14-155 162-334 (509)
131 PRK05476 S-adenosyl-L-homocyst 98.6 1.2E-06 2.7E-11 67.8 11.1 97 4-103 198-303 (425)
132 TIGR00936 ahcY adenosylhomocys 98.4 4.4E-06 9.6E-11 64.4 10.8 95 5-102 182-285 (406)
133 PLN02494 adenosylhomocysteinas 98.4 7.1E-06 1.5E-10 64.1 11.1 92 5-102 241-344 (477)
134 PRK11873 arsM arsenite S-adeno 98.3 3.9E-06 8.5E-11 61.8 8.1 89 11-101 72-185 (272)
135 TIGR00561 pntA NAD(P) transhyd 98.3 4.7E-06 1E-10 65.9 8.4 88 15-103 162-288 (511)
136 PRK05786 fabG 3-ketoacyl-(acyl 98.2 1.4E-05 3E-10 57.4 8.8 87 16-102 4-138 (238)
137 COG4221 Short-chain alcohol de 98.1 4.1E-05 9E-10 54.6 9.2 88 16-103 5-143 (246)
138 TIGR00518 alaDH alanine dehydr 98.1 0.00012 2.6E-09 56.3 12.0 85 17-103 167-271 (370)
139 COG3967 DltE Short-chain dehyd 98.0 1.7E-05 3.7E-10 55.0 5.6 38 16-53 4-41 (245)
140 PRK08306 dipicolinate synthase 98.0 6.3E-05 1.4E-09 56.1 8.8 86 16-103 151-245 (296)
141 PRK05993 short chain dehydroge 98.0 0.0001 2.2E-09 54.4 9.8 63 16-78 3-85 (277)
142 PTZ00075 Adenosylhomocysteinas 98.0 9.5E-05 2.1E-09 58.0 9.6 95 6-102 242-344 (476)
143 PRK08324 short chain dehydroge 97.9 7.4E-05 1.6E-09 62.0 9.1 37 16-52 421-457 (681)
144 PRK12742 oxidoreductase; Provi 97.9 0.00014 3.1E-09 52.1 9.6 35 16-50 5-39 (237)
145 PF13460 NAD_binding_10: NADH( 97.9 0.00021 4.6E-09 49.2 9.3 82 20-103 1-101 (183)
146 COG0300 DltE Short-chain dehyd 97.8 8.2E-05 1.8E-09 54.2 6.9 39 15-53 4-42 (265)
147 PRK06182 short chain dehydroge 97.8 0.00017 3.7E-09 53.0 8.7 63 16-78 2-83 (273)
148 PRK05693 short chain dehydroge 97.8 0.00023 4.9E-09 52.4 9.2 61 18-78 2-81 (274)
149 PRK07806 short chain dehydroge 97.8 0.00038 8.2E-09 50.3 10.0 36 16-51 5-40 (248)
150 PRK08265 short chain dehydroge 97.8 0.00035 7.5E-09 51.1 9.4 37 16-52 5-41 (261)
151 PRK07109 short chain dehydroge 97.7 0.00029 6.3E-09 53.5 8.8 37 16-52 7-43 (334)
152 PRK06128 oxidoreductase; Provi 97.7 0.00047 1E-08 51.5 9.5 36 16-51 54-89 (300)
153 PRK12939 short chain dehydroge 97.7 0.00046 1E-08 49.8 9.0 37 16-52 6-42 (250)
154 PRK08339 short chain dehydroge 97.6 0.00054 1.2E-08 50.2 9.0 36 16-51 7-42 (263)
155 KOG1205 Predicted dehydrogenas 97.6 0.00068 1.5E-08 49.9 9.3 89 16-104 11-154 (282)
156 TIGR00438 rrmJ cell division p 97.6 0.0019 4.1E-08 44.9 11.0 87 12-99 28-146 (188)
157 PRK06398 aldose dehydrogenase; 97.6 0.00033 7.1E-09 51.1 7.4 63 16-78 5-81 (258)
158 KOG1209 1-Acyl dihydroxyaceton 97.6 0.00097 2.1E-08 46.9 9.1 89 16-104 6-143 (289)
159 PRK05872 short chain dehydroge 97.6 0.00021 4.6E-09 53.2 6.2 37 16-52 8-44 (296)
160 PRK08261 fabG 3-ketoacyl-(acyl 97.6 0.00094 2E-08 52.8 10.1 36 16-51 209-244 (450)
161 PRK06179 short chain dehydroge 97.6 0.00037 8E-09 51.1 7.1 64 16-79 3-83 (270)
162 PRK06949 short chain dehydroge 97.6 0.00027 5.8E-09 51.4 6.3 38 15-52 7-44 (258)
163 PRK06139 short chain dehydroge 97.5 0.00024 5.2E-09 53.9 6.1 37 16-52 6-42 (330)
164 PRK07985 oxidoreductase; Provi 97.5 0.0013 2.8E-08 49.1 9.9 35 16-50 48-82 (294)
165 PRK06057 short chain dehydroge 97.5 0.00032 6.9E-09 51.0 6.5 37 16-52 6-42 (255)
166 PRK06523 short chain dehydroge 97.5 0.00037 8E-09 50.7 6.9 62 16-78 8-86 (260)
167 PRK12828 short chain dehydroge 97.5 0.00038 8.2E-09 49.8 6.7 37 16-52 6-42 (239)
168 PRK08177 short chain dehydroge 97.5 0.00073 1.6E-08 48.2 8.1 61 18-78 2-80 (225)
169 PF02826 2-Hacid_dh_C: D-isome 97.5 0.00059 1.3E-08 47.1 7.3 79 16-100 35-128 (178)
170 PRK06200 2,3-dihydroxy-2,3-dih 97.5 0.00033 7.2E-09 51.1 6.3 37 16-52 5-41 (263)
171 KOG0725 Reductases with broad 97.5 0.00046 9.9E-09 50.8 7.0 38 16-53 7-44 (270)
172 PRK07062 short chain dehydroge 97.5 0.00044 9.5E-09 50.5 6.8 37 16-52 7-43 (265)
173 PRK07814 short chain dehydroge 97.5 0.00035 7.5E-09 51.1 6.2 37 16-52 9-45 (263)
174 PRK08217 fabG 3-ketoacyl-(acyl 97.5 0.00038 8.3E-09 50.3 6.3 37 16-52 4-40 (253)
175 PRK05866 short chain dehydroge 97.5 0.00036 7.8E-09 52.0 6.2 36 17-52 40-75 (293)
176 PRK07577 short chain dehydroge 97.5 0.00074 1.6E-08 48.3 7.7 64 16-79 2-78 (234)
177 PRK06701 short chain dehydroge 97.5 0.0019 4.1E-08 48.1 10.0 36 16-51 45-80 (290)
178 PRK12937 short chain dehydroge 97.5 0.0014 3.1E-08 47.1 9.1 36 16-51 4-39 (245)
179 PRK08261 fabG 3-ketoacyl-(acyl 97.5 0.0003 6.5E-09 55.6 6.0 83 12-102 29-126 (450)
180 PRK07856 short chain dehydroge 97.5 0.00054 1.2E-08 49.7 6.8 63 16-78 5-84 (252)
181 TIGR03325 BphB_TodD cis-2,3-di 97.5 0.00044 9.6E-09 50.5 6.4 37 16-52 4-40 (262)
182 PRK06196 oxidoreductase; Provi 97.5 0.00052 1.1E-08 51.6 6.8 37 16-52 25-61 (315)
183 TIGR02853 spore_dpaA dipicolin 97.4 0.00098 2.1E-08 49.5 8.1 85 16-102 150-243 (287)
184 PRK07576 short chain dehydroge 97.4 0.00046 1E-08 50.5 6.3 37 16-52 8-44 (264)
185 PRK00377 cbiT cobalt-precorrin 97.4 0.0019 4.1E-08 45.3 9.2 86 10-98 34-144 (198)
186 TIGR01832 kduD 2-deoxy-D-gluco 97.4 0.0005 1.1E-08 49.7 6.4 36 16-51 4-39 (248)
187 PRK05867 short chain dehydroge 97.4 0.00045 9.8E-09 50.1 6.2 37 16-52 8-44 (253)
188 PRK06484 short chain dehydroge 97.4 0.0012 2.7E-08 53.0 9.2 89 15-103 267-404 (520)
189 PLN02780 ketoreductase/ oxidor 97.4 0.00052 1.1E-08 51.8 6.6 38 16-53 52-89 (320)
190 PRK08703 short chain dehydroge 97.4 0.00068 1.5E-08 48.7 6.9 37 16-52 5-41 (239)
191 PRK06180 short chain dehydroge 97.4 0.00051 1.1E-08 50.6 6.3 37 16-52 3-39 (277)
192 PRK07825 short chain dehydroge 97.4 0.00048 1E-08 50.6 6.1 36 17-52 5-40 (273)
193 PRK06114 short chain dehydroge 97.4 0.00087 1.9E-08 48.7 7.4 37 16-52 7-43 (254)
194 PRK07060 short chain dehydroge 97.4 0.00084 1.8E-08 48.3 7.3 37 16-52 8-44 (245)
195 PRK07478 short chain dehydroge 97.4 0.0006 1.3E-08 49.5 6.4 37 16-52 5-41 (254)
196 PRK06171 sorbitol-6-phosphate 97.4 0.00094 2E-08 48.8 7.4 63 16-78 8-86 (266)
197 PRK12481 2-deoxy-D-gluconate 3 97.4 0.00056 1.2E-08 49.7 6.2 36 16-51 7-42 (251)
198 PRK05854 short chain dehydroge 97.4 0.00065 1.4E-08 51.1 6.7 37 16-52 13-49 (313)
199 PRK06841 short chain dehydroge 97.4 0.0007 1.5E-08 49.1 6.5 37 16-52 14-50 (255)
200 PRK09291 short chain dehydroge 97.4 0.00066 1.4E-08 49.3 6.3 62 17-78 2-82 (257)
201 PRK06194 hypothetical protein; 97.4 0.00075 1.6E-08 49.9 6.7 37 16-52 5-41 (287)
202 PRK06077 fabG 3-ketoacyl-(acyl 97.4 0.0031 6.6E-08 45.6 9.8 34 17-50 6-39 (252)
203 PRK07832 short chain dehydroge 97.4 0.0018 3.9E-08 47.6 8.6 33 19-51 2-34 (272)
204 KOG4022 Dihydropteridine reduc 97.4 0.0011 2.3E-08 44.6 6.5 62 18-79 4-82 (236)
205 PRK06718 precorrin-2 dehydroge 97.4 0.0023 4.9E-08 45.1 8.6 84 16-100 9-101 (202)
206 PRK07231 fabG 3-ketoacyl-(acyl 97.4 0.00074 1.6E-08 48.7 6.4 37 16-52 4-40 (251)
207 PRK06172 short chain dehydroge 97.4 0.0007 1.5E-08 49.1 6.3 37 16-52 6-42 (253)
208 PRK07523 gluconate 5-dehydroge 97.4 0.00072 1.6E-08 49.1 6.3 37 16-52 9-45 (255)
209 PRK12829 short chain dehydroge 97.3 0.00097 2.1E-08 48.5 7.0 40 13-52 7-46 (264)
210 PRK07677 short chain dehydroge 97.3 0.00073 1.6E-08 49.0 6.3 36 17-52 1-36 (252)
211 PRK06500 short chain dehydroge 97.3 0.00069 1.5E-08 48.9 6.1 36 16-51 5-40 (249)
212 PRK08643 acetoin reductase; Va 97.3 0.00087 1.9E-08 48.7 6.6 36 17-52 2-37 (256)
213 PRK07890 short chain dehydroge 97.3 0.00074 1.6E-08 49.0 6.2 37 16-52 4-40 (258)
214 PRK06483 dihydromonapterin red 97.3 0.0015 3.1E-08 46.9 7.5 36 17-52 2-37 (236)
215 PRK13394 3-hydroxybutyrate deh 97.3 0.00093 2E-08 48.6 6.6 37 16-52 6-42 (262)
216 PRK08862 short chain dehydroge 97.3 0.0011 2.3E-08 47.6 6.8 37 16-52 4-40 (227)
217 PF00670 AdoHcyase_NAD: S-aden 97.3 0.0016 3.4E-08 44.0 7.0 95 5-101 10-112 (162)
218 PRK08085 gluconate 5-dehydroge 97.3 0.00098 2.1E-08 48.4 6.6 37 16-52 8-44 (254)
219 PRK07904 short chain dehydroge 97.3 0.0018 3.8E-08 47.2 7.9 39 14-52 5-44 (253)
220 PRK08993 2-deoxy-D-gluconate 3 97.3 0.001 2.2E-08 48.3 6.7 35 16-50 9-43 (253)
221 PRK06197 short chain dehydroge 97.3 0.00085 1.8E-08 50.2 6.4 36 16-51 15-50 (306)
222 PRK12747 short chain dehydroge 97.3 0.0039 8.5E-08 45.2 9.6 34 16-49 3-36 (252)
223 PRK06181 short chain dehydroge 97.3 0.00085 1.8E-08 48.9 6.2 36 17-52 1-36 (263)
224 PRK08628 short chain dehydroge 97.3 0.0011 2.5E-08 48.1 6.8 37 16-52 6-42 (258)
225 PRK07831 short chain dehydroge 97.3 0.0011 2.3E-08 48.4 6.7 39 14-52 14-53 (262)
226 PRK07774 short chain dehydroge 97.3 0.001 2.2E-08 48.1 6.5 37 16-52 5-41 (250)
227 PRK05876 short chain dehydroge 97.3 0.0009 2E-08 49.4 6.2 36 16-51 5-40 (275)
228 PRK06914 short chain dehydroge 97.3 0.0011 2.3E-08 48.9 6.6 37 16-52 2-38 (280)
229 PRK08589 short chain dehydroge 97.3 0.0011 2.4E-08 48.7 6.7 35 16-50 5-39 (272)
230 COG2910 Putative NADH-flavin r 97.3 0.0026 5.7E-08 43.6 7.8 85 19-103 2-108 (211)
231 PRK05653 fabG 3-ketoacyl-(acyl 97.3 0.0012 2.6E-08 47.4 6.7 37 16-52 4-40 (246)
232 PRK08416 7-alpha-hydroxysteroi 97.3 0.0011 2.4E-08 48.3 6.6 36 16-51 7-42 (260)
233 PRK07063 short chain dehydroge 97.3 0.001 2.3E-08 48.4 6.4 37 16-52 6-42 (260)
234 PRK06935 2-deoxy-D-gluconate 3 97.3 0.0012 2.6E-08 48.0 6.7 35 16-50 14-48 (258)
235 PRK08017 oxidoreductase; Provi 97.3 0.0013 2.8E-08 47.7 6.8 36 18-53 3-38 (256)
236 PRK05717 oxidoreductase; Valid 97.3 0.0011 2.3E-08 48.3 6.3 36 16-51 9-44 (255)
237 PRK07035 short chain dehydroge 97.3 0.001 2.2E-08 48.2 6.3 37 16-52 7-43 (252)
238 PRK12826 3-ketoacyl-(acyl-carr 97.3 0.00095 2E-08 48.1 6.1 37 16-52 5-41 (251)
239 PRK12743 oxidoreductase; Provi 97.2 0.0015 3.2E-08 47.5 7.0 35 17-51 2-36 (256)
240 PRK07326 short chain dehydroge 97.2 0.0011 2.3E-08 47.5 6.1 37 16-52 5-41 (237)
241 PRK12429 3-hydroxybutyrate deh 97.2 0.0012 2.7E-08 47.8 6.5 37 16-52 3-39 (258)
242 PLN02253 xanthoxin dehydrogena 97.2 0.0011 2.4E-08 48.8 6.3 36 16-51 17-52 (280)
243 PRK06463 fabG 3-ketoacyl-(acyl 97.2 0.0015 3.2E-08 47.5 6.9 36 16-51 6-41 (255)
244 PRK06125 short chain dehydroge 97.2 0.0017 3.6E-08 47.3 7.2 37 16-52 6-42 (259)
245 cd05213 NAD_bind_Glutamyl_tRNA 97.2 0.0037 8E-08 47.1 9.1 77 3-82 161-251 (311)
246 PRK08277 D-mannonate oxidoredu 97.2 0.0013 2.7E-08 48.5 6.4 37 16-52 9-45 (278)
247 PRK08213 gluconate 5-dehydroge 97.2 0.0011 2.5E-08 48.1 6.2 37 16-52 11-47 (259)
248 PRK06138 short chain dehydroge 97.2 0.0012 2.7E-08 47.6 6.2 37 16-52 4-40 (252)
249 PRK07453 protochlorophyllide o 97.2 0.0013 2.7E-08 49.7 6.4 37 16-52 5-41 (322)
250 PRK12823 benD 1,6-dihydroxycyc 97.2 0.0014 3.1E-08 47.6 6.5 36 16-51 7-42 (260)
251 PRK14175 bifunctional 5,10-met 97.2 0.0044 9.5E-08 45.9 8.8 76 16-102 157-233 (286)
252 PRK07666 fabG 3-ketoacyl-(acyl 97.2 0.0014 3E-08 47.1 6.2 37 16-52 6-42 (239)
253 PRK06124 gluconate 5-dehydroge 97.2 0.0014 3.1E-08 47.5 6.4 37 16-52 10-46 (256)
254 PRK07454 short chain dehydroge 97.2 0.0015 3.2E-08 47.0 6.3 38 15-52 4-41 (241)
255 PRK09186 flagellin modificatio 97.2 0.0016 3.5E-08 47.2 6.6 36 16-51 3-38 (256)
256 PRK07578 short chain dehydroge 97.2 0.0099 2.1E-07 41.5 10.3 59 19-79 2-65 (199)
257 PRK07067 sorbitol dehydrogenas 97.2 0.0016 3.4E-08 47.4 6.3 37 16-52 5-41 (257)
258 PRK05875 short chain dehydroge 97.1 0.0015 3.3E-08 48.0 6.3 37 16-52 6-42 (276)
259 PRK07791 short chain dehydroge 97.1 0.0022 4.7E-08 47.6 7.0 37 15-51 4-40 (286)
260 PRK09072 short chain dehydroge 97.1 0.0019 4.1E-08 47.2 6.6 37 16-52 4-40 (263)
261 PRK08340 glucose-1-dehydrogena 97.1 0.0015 3.2E-08 47.6 6.0 34 19-52 2-35 (259)
262 KOG1014 17 beta-hydroxysteroid 97.1 0.0019 4.2E-08 47.8 6.4 38 15-53 47-85 (312)
263 PRK07024 short chain dehydroge 97.1 0.0018 3.9E-08 47.1 6.4 36 17-52 2-37 (257)
264 PRK08267 short chain dehydroge 97.1 0.0025 5.4E-08 46.4 7.1 35 18-52 2-36 (260)
265 PRK13943 protein-L-isoaspartat 97.1 0.0041 8.9E-08 47.0 8.3 87 10-98 74-179 (322)
266 PRK09242 tropinone reductase; 97.1 0.0017 3.8E-08 47.1 6.3 37 16-52 8-44 (257)
267 TIGR01470 cysG_Nterm siroheme 97.1 0.0057 1.2E-07 43.2 8.6 84 16-100 8-101 (205)
268 PRK07074 short chain dehydroge 97.1 0.002 4.3E-08 46.8 6.5 36 17-52 2-37 (257)
269 PRK09135 pteridine reductase; 97.1 0.0024 5.2E-08 46.0 6.9 36 16-51 5-40 (249)
270 TIGR03206 benzo_BadH 2-hydroxy 97.1 0.0017 3.8E-08 46.8 6.2 37 16-52 2-38 (250)
271 PRK08936 glucose-1-dehydrogena 97.1 0.0025 5.4E-08 46.5 7.0 36 16-51 6-41 (261)
272 PRK06113 7-alpha-hydroxysteroi 97.1 0.002 4.3E-08 46.8 6.5 37 16-52 10-46 (255)
273 PF12847 Methyltransf_18: Meth 97.1 0.0012 2.6E-08 41.5 4.7 81 16-98 1-110 (112)
274 PF02353 CMAS: Mycolic acid cy 97.1 0.0014 3E-08 48.4 5.5 90 7-99 53-166 (273)
275 PRK07097 gluconate 5-dehydroge 97.1 0.0023 4.9E-08 46.8 6.7 37 16-52 9-45 (265)
276 PRK08251 short chain dehydroge 97.1 0.0021 4.6E-08 46.4 6.4 36 17-52 2-37 (248)
277 PRK06198 short chain dehydroge 97.1 0.0017 3.7E-08 47.2 5.9 37 16-52 5-42 (260)
278 PRK08263 short chain dehydroge 97.1 0.002 4.4E-08 47.4 6.3 36 17-52 3-38 (275)
279 COG2518 Pcm Protein-L-isoaspar 97.1 0.0053 1.1E-07 43.2 7.9 88 9-100 65-170 (209)
280 PRK12384 sorbitol-6-phosphate 97.1 0.0023 5.1E-08 46.5 6.6 36 17-52 2-37 (259)
281 PRK08226 short chain dehydroge 97.1 0.0021 4.5E-08 46.9 6.3 36 16-51 5-40 (263)
282 PRK05557 fabG 3-ketoacyl-(acyl 97.1 0.0031 6.7E-08 45.3 7.1 37 16-52 4-40 (248)
283 PRK06482 short chain dehydroge 97.1 0.0019 4.1E-08 47.5 6.0 35 18-52 3-37 (276)
284 PF01488 Shikimate_DH: Shikima 97.0 0.0022 4.7E-08 42.2 5.7 63 16-80 11-86 (135)
285 PLN02657 3,8-divinyl protochlo 97.0 0.0052 1.1E-07 47.7 8.5 37 15-51 58-94 (390)
286 PRK06720 hypothetical protein; 97.0 0.0032 7E-08 43.1 6.6 36 16-51 15-50 (169)
287 PRK08278 short chain dehydroge 97.0 0.0036 7.8E-08 46.1 7.3 36 16-51 5-40 (273)
288 PRK06079 enoyl-(acyl carrier p 97.0 0.0021 4.6E-08 46.7 6.0 35 16-50 6-42 (252)
289 PRK08264 short chain dehydroge 97.0 0.0049 1.1E-07 44.2 7.9 37 16-52 5-42 (238)
290 PRK06953 short chain dehydroge 97.0 0.0038 8.2E-08 44.4 7.2 35 18-52 2-36 (222)
291 PRK12938 acetyacetyl-CoA reduc 97.0 0.0032 6.8E-08 45.4 6.8 34 16-49 2-35 (246)
292 PRK08642 fabG 3-ketoacyl-(acyl 97.0 0.0034 7.4E-08 45.4 7.0 34 17-50 5-38 (253)
293 PRK11705 cyclopropane fatty ac 97.0 0.006 1.3E-07 47.3 8.6 92 6-100 157-268 (383)
294 PRK06484 short chain dehydroge 97.0 0.0023 4.9E-08 51.5 6.5 38 16-53 4-41 (520)
295 cd01080 NAD_bind_m-THF_DH_Cycl 97.0 0.016 3.4E-07 39.6 9.6 78 15-102 42-119 (168)
296 PRK10538 malonic semialdehyde 97.0 0.0025 5.5E-08 46.1 6.1 34 19-52 2-35 (248)
297 PRK06505 enoyl-(acyl carrier p 97.0 0.0028 6E-08 46.7 6.3 36 16-51 6-43 (271)
298 PRK08220 2,3-dihydroxybenzoate 97.0 0.0036 7.8E-08 45.2 6.8 64 16-79 7-86 (252)
299 PRK00045 hemA glutamyl-tRNA re 97.0 0.003 6.5E-08 49.6 6.7 75 3-80 165-253 (423)
300 PRK07533 enoyl-(acyl carrier p 97.0 0.0037 8.1E-08 45.6 6.9 36 16-51 9-46 (258)
301 PRK08303 short chain dehydroge 97.0 0.0041 8.8E-08 46.7 7.2 35 16-50 7-41 (305)
302 PF01113 DapB_N: Dihydrodipico 97.0 0.004 8.7E-08 40.3 6.2 83 19-102 2-100 (124)
303 PRK05884 short chain dehydroge 97.0 0.0033 7.2E-08 44.8 6.4 34 19-52 2-35 (223)
304 PRK12825 fabG 3-ketoacyl-(acyl 96.9 0.0038 8.2E-08 44.8 6.7 36 17-52 6-41 (249)
305 PRK09134 short chain dehydroge 96.9 0.0046 1E-07 45.0 7.1 36 16-51 8-43 (258)
306 TIGR02622 CDP_4_6_dhtase CDP-g 96.9 0.0051 1.1E-07 46.9 7.6 37 16-52 3-39 (349)
307 TIGR00406 prmA ribosomal prote 96.9 0.0039 8.5E-08 46.4 6.7 85 14-101 157-261 (288)
308 PF04321 RmlD_sub_bind: RmlD s 96.9 0.0047 1E-07 45.9 7.1 57 19-78 2-60 (286)
309 PRK05650 short chain dehydroge 96.9 0.0032 7E-08 46.1 6.2 34 19-52 2-35 (270)
310 PRK08063 enoyl-(acyl carrier p 96.9 0.0043 9.4E-08 44.8 6.8 32 16-47 3-34 (250)
311 PRK12936 3-ketoacyl-(acyl-carr 96.9 0.004 8.6E-08 44.8 6.4 37 16-52 5-41 (245)
312 PRK12771 putative glutamate sy 96.9 0.0078 1.7E-07 49.1 8.7 38 13-51 133-170 (564)
313 PRK07775 short chain dehydroge 96.9 0.0038 8.2E-08 46.0 6.4 36 16-51 9-44 (274)
314 KOG1201 Hydroxysteroid 17-beta 96.9 0.0062 1.3E-07 45.0 7.2 38 16-53 37-74 (300)
315 PRK07102 short chain dehydroge 96.9 0.0044 9.6E-08 44.6 6.6 35 18-52 2-36 (243)
316 PRK07889 enoyl-(acyl carrier p 96.9 0.0048 1E-07 45.0 6.8 36 16-51 6-43 (256)
317 PF00106 adh_short: short chai 96.9 0.0019 4.1E-08 43.6 4.4 33 18-50 1-34 (167)
318 PRK07424 bifunctional sterol d 96.9 0.0051 1.1E-07 48.0 7.2 37 16-52 177-213 (406)
319 PRK12744 short chain dehydroge 96.9 0.0063 1.4E-07 44.2 7.4 35 16-50 7-41 (257)
320 TIGR01963 PHB_DH 3-hydroxybuty 96.9 0.0034 7.3E-08 45.4 5.9 36 17-52 1-36 (255)
321 PRK12935 acetoacetyl-CoA reduc 96.9 0.0052 1.1E-07 44.3 6.9 35 16-50 5-39 (247)
322 PRK12745 3-ketoacyl-(acyl-carr 96.9 0.0052 1.1E-07 44.5 6.9 34 18-51 3-36 (256)
323 PRK07792 fabG 3-ketoacyl-(acyl 96.9 0.0062 1.3E-07 45.7 7.3 36 16-51 11-46 (306)
324 PRK15469 ghrA bifunctional gly 96.9 0.018 3.9E-07 43.4 9.7 84 16-101 135-228 (312)
325 TIGR01214 rmlD dTDP-4-dehydror 96.9 0.0038 8.2E-08 46.1 6.1 58 19-79 1-60 (287)
326 PRK08594 enoyl-(acyl carrier p 96.8 0.0065 1.4E-07 44.3 7.2 35 16-50 6-42 (257)
327 PRK06947 glucose-1-dehydrogena 96.8 0.005 1.1E-07 44.4 6.6 33 18-50 3-35 (248)
328 PRK06550 fabG 3-ketoacyl-(acyl 96.8 0.0057 1.2E-07 43.7 6.9 62 16-78 4-76 (235)
329 TIGR01829 AcAcCoA_reduct aceto 96.8 0.0052 1.1E-07 44.1 6.6 33 18-50 1-33 (242)
330 TIGR03649 ergot_EASG ergot alk 96.8 0.018 3.8E-07 42.6 9.6 82 19-100 1-105 (285)
331 PRK00517 prmA ribosomal protei 96.8 0.0052 1.1E-07 44.8 6.6 85 14-101 117-215 (250)
332 PLN00141 Tic62-NAD(P)-related 96.8 0.0056 1.2E-07 44.5 6.8 87 16-102 16-134 (251)
333 PRK07984 enoyl-(acyl carrier p 96.8 0.0066 1.4E-07 44.5 7.1 35 16-50 5-41 (262)
334 PRK08690 enoyl-(acyl carrier p 96.8 0.0044 9.6E-08 45.3 6.2 35 16-50 5-41 (261)
335 PF01118 Semialdhyde_dh: Semia 96.8 0.019 4.1E-07 36.9 8.4 81 19-99 1-97 (121)
336 PRK14189 bifunctional 5,10-met 96.8 0.01 2.3E-07 43.9 7.9 77 16-102 157-233 (285)
337 CHL00194 ycf39 Ycf39; Provisio 96.8 0.014 3E-07 44.0 8.9 82 19-101 2-111 (317)
338 KOG1200 Mitochondrial/plastidi 96.8 0.0067 1.5E-07 42.2 6.4 62 17-78 14-99 (256)
339 PRK08945 putative oxoacyl-(acy 96.8 0.0045 9.8E-08 44.7 6.0 39 14-52 9-47 (247)
340 TIGR02415 23BDH acetoin reduct 96.8 0.0051 1.1E-07 44.5 6.2 35 18-52 1-35 (254)
341 PRK08415 enoyl-(acyl carrier p 96.8 0.0059 1.3E-07 45.0 6.5 36 16-51 4-41 (274)
342 TIGR01035 hemA glutamyl-tRNA r 96.8 0.0089 1.9E-07 46.9 7.8 65 13-80 176-251 (417)
343 PRK07370 enoyl-(acyl carrier p 96.8 0.0075 1.6E-07 44.0 7.0 35 16-50 5-41 (258)
344 PRK12827 short chain dehydroge 96.8 0.0081 1.8E-07 43.2 7.1 35 16-50 5-39 (249)
345 PRK14192 bifunctional 5,10-met 96.7 0.021 4.6E-07 42.4 9.3 78 15-102 157-234 (283)
346 TIGR02469 CbiT precorrin-6Y C5 96.7 0.013 2.9E-07 37.3 7.4 89 9-99 12-122 (124)
347 PRK06487 glycerate dehydrogena 96.7 0.021 4.6E-07 43.2 9.4 80 16-101 147-235 (317)
348 PRK14191 bifunctional 5,10-met 96.7 0.035 7.5E-07 41.1 10.1 83 10-102 149-232 (285)
349 PRK06849 hypothetical protein; 96.7 0.016 3.6E-07 44.9 9.0 79 16-94 3-102 (389)
350 PRK06603 enoyl-(acyl carrier p 96.7 0.0065 1.4E-07 44.4 6.4 35 16-50 7-43 (260)
351 PRK10792 bifunctional 5,10-met 96.7 0.037 8.1E-07 41.0 10.1 83 10-102 151-234 (285)
352 PRK08410 2-hydroxyacid dehydro 96.7 0.015 3.3E-07 43.8 8.4 80 16-101 144-234 (311)
353 cd05212 NAD_bind_m-THF_DH_Cycl 96.7 0.048 1E-06 36.1 9.7 81 10-100 20-101 (140)
354 PRK14177 bifunctional 5,10-met 96.7 0.083 1.8E-06 39.1 11.9 77 15-101 157-233 (284)
355 PRK07023 short chain dehydroge 96.7 0.011 2.5E-07 42.5 7.5 34 19-52 3-36 (243)
356 TIGR01289 LPOR light-dependent 96.7 0.0074 1.6E-07 45.4 6.7 36 17-52 3-39 (314)
357 PRK12746 short chain dehydroge 96.7 0.0087 1.9E-07 43.3 6.9 35 16-50 5-40 (254)
358 COG2230 Cfa Cyclopropane fatty 96.7 0.0062 1.3E-07 44.9 6.0 97 5-103 61-180 (283)
359 PRK05565 fabG 3-ketoacyl-(acyl 96.7 0.0072 1.6E-07 43.4 6.3 35 17-51 5-40 (247)
360 PRK06101 short chain dehydroge 96.6 0.0096 2.1E-07 42.9 6.9 35 18-52 2-36 (240)
361 PRK08159 enoyl-(acyl carrier p 96.6 0.0081 1.7E-07 44.3 6.5 37 14-50 7-45 (272)
362 PRK06932 glycerate dehydrogena 96.6 0.019 4.2E-07 43.3 8.6 80 16-101 146-235 (314)
363 PRK07201 short chain dehydroge 96.6 0.0055 1.2E-07 50.7 6.2 36 17-52 371-406 (657)
364 PRK06719 precorrin-2 dehydroge 96.6 0.027 6E-07 38.0 8.5 80 16-99 12-100 (157)
365 PRK05855 short chain dehydroge 96.6 0.0061 1.3E-07 49.5 6.3 37 16-52 314-350 (582)
366 PRK09730 putative NAD(P)-bindi 96.6 0.012 2.6E-07 42.3 7.1 31 18-48 2-32 (247)
367 PF00070 Pyr_redox: Pyridine n 96.6 0.013 2.9E-07 34.6 6.1 57 19-76 1-61 (80)
368 TIGR02632 RhaD_aldol-ADH rhamn 96.6 0.0067 1.5E-07 50.5 6.4 37 16-52 413-449 (676)
369 PF13241 NAD_binding_7: Putati 96.6 0.006 1.3E-07 38.1 4.7 80 16-101 6-93 (103)
370 PF01370 Epimerase: NAD depend 96.6 0.016 3.5E-07 41.3 7.6 60 20-79 1-75 (236)
371 PRK06123 short chain dehydroge 96.6 0.0099 2.1E-07 42.8 6.5 34 17-50 2-35 (248)
372 PRK12824 acetoacetyl-CoA reduc 96.6 0.011 2.3E-07 42.5 6.7 34 18-51 3-36 (245)
373 TIGR02685 pter_reduc_Leis pter 96.5 0.016 3.5E-07 42.4 7.5 33 18-50 2-34 (267)
374 PRK09987 dTDP-4-dehydrorhamnos 96.5 0.0079 1.7E-07 44.9 5.9 58 19-78 2-63 (299)
375 PF01135 PCMT: Protein-L-isoas 96.5 0.0027 5.8E-08 45.0 3.1 92 6-100 62-173 (209)
376 PLN03209 translocon at the inn 96.5 0.0044 9.5E-08 50.1 4.6 41 12-52 75-115 (576)
377 PRK06940 short chain dehydroge 96.5 0.036 7.7E-07 40.9 9.1 34 17-52 2-35 (275)
378 COG4122 Predicted O-methyltran 96.5 0.038 8.3E-07 39.3 8.7 87 10-98 53-165 (219)
379 PLN00016 RNA-binding protein; 96.5 0.034 7.4E-07 43.0 9.2 85 17-102 52-167 (378)
380 PRK12367 short chain dehydroge 96.5 0.0087 1.9E-07 43.4 5.6 63 16-79 13-89 (245)
381 PRK12748 3-ketoacyl-(acyl-carr 96.4 0.014 3.1E-07 42.3 6.7 35 16-50 4-40 (256)
382 PRK14176 bifunctional 5,10-met 96.4 0.061 1.3E-06 39.9 9.8 82 10-101 156-238 (287)
383 COG2242 CobL Precorrin-6B meth 96.4 0.045 9.7E-07 37.8 8.5 85 11-100 29-136 (187)
384 PLN02928 oxidoreductase family 96.4 0.029 6.3E-07 42.9 8.5 83 16-100 158-263 (347)
385 PRK13243 glyoxylate reductase; 96.4 0.029 6.3E-07 42.7 8.4 84 16-101 149-242 (333)
386 PRK13942 protein-L-isoaspartat 96.4 0.016 3.4E-07 41.2 6.5 90 8-99 68-176 (212)
387 KOG1610 Corticosteroid 11-beta 96.4 0.081 1.8E-06 39.5 10.2 89 16-104 28-169 (322)
388 PRK06436 glycerate dehydrogena 96.4 0.041 8.9E-07 41.3 9.0 84 16-101 121-211 (303)
389 COG0686 Ald Alanine dehydrogen 96.4 0.062 1.3E-06 40.2 9.4 82 15-103 167-272 (371)
390 KOG1210 Predicted 3-ketosphing 96.4 0.026 5.6E-07 42.1 7.5 40 14-53 30-69 (331)
391 COG2226 UbiE Methylase involve 96.3 0.034 7.3E-07 40.2 7.9 93 8-102 43-159 (238)
392 TIGR01831 fabG_rel 3-oxoacyl-( 96.3 0.012 2.7E-07 42.1 5.8 32 20-51 1-32 (239)
393 PRK05562 precorrin-2 dehydroge 96.3 0.054 1.2E-06 38.7 8.6 81 16-100 24-117 (223)
394 PRK04148 hypothetical protein; 96.3 0.012 2.5E-07 38.6 4.8 40 12-53 12-51 (134)
395 PRK14173 bifunctional 5,10-met 96.3 0.073 1.6E-06 39.5 9.5 83 10-102 147-230 (287)
396 PF02882 THF_DHG_CYH_C: Tetrah 96.2 0.2 4.4E-06 33.9 11.6 79 15-103 34-112 (160)
397 PRK06997 enoyl-(acyl carrier p 96.2 0.018 3.8E-07 42.1 6.3 34 16-49 5-40 (260)
398 PRK05599 hypothetical protein; 96.2 0.015 3.3E-07 42.1 5.9 33 19-52 2-34 (246)
399 COG1748 LYS9 Saccharopine dehy 96.2 0.034 7.3E-07 43.0 7.8 80 18-100 2-100 (389)
400 COG1090 Predicted nucleoside-d 96.2 0.016 3.4E-07 42.5 5.6 61 20-80 1-67 (297)
401 PRK07069 short chain dehydroge 96.2 0.018 4E-07 41.5 6.1 31 20-50 2-32 (251)
402 TIGR01777 yfcH conserved hypot 96.2 0.012 2.7E-07 43.4 5.3 59 20-79 1-67 (292)
403 PLN02240 UDP-glucose 4-epimera 96.2 0.028 6E-07 42.8 7.3 34 17-50 5-38 (352)
404 KOG1208 Dehydrogenases with di 96.2 0.023 5E-07 42.8 6.6 38 16-53 34-71 (314)
405 PRK12480 D-lactate dehydrogena 96.2 0.067 1.5E-06 40.7 9.1 83 16-100 145-235 (330)
406 PRK14178 bifunctional 5,10-met 96.1 0.12 2.5E-06 38.3 10.0 83 10-102 144-227 (279)
407 PRK05579 bifunctional phosphop 96.1 0.042 9.1E-07 42.9 8.1 62 16-78 187-276 (399)
408 PF02670 DXP_reductoisom: 1-de 96.1 0.099 2.2E-06 34.0 8.5 31 20-50 1-33 (129)
409 PLN03075 nicotianamine synthas 96.1 0.042 9.2E-07 40.9 7.6 84 15-99 122-233 (296)
410 PRK14172 bifunctional 5,10-met 96.1 0.053 1.2E-06 40.0 8.1 83 10-102 150-233 (278)
411 PRK14180 bifunctional 5,10-met 96.1 0.049 1.1E-06 40.3 7.9 77 16-102 157-233 (282)
412 PRK15181 Vi polysaccharide bio 96.1 0.021 4.6E-07 43.6 6.3 48 3-51 2-49 (348)
413 PLN02695 GDP-D-mannose-3',5'-e 96.1 0.036 7.9E-07 42.8 7.6 37 15-51 19-55 (370)
414 PF02719 Polysacc_synt_2: Poly 96.1 0.023 5E-07 42.2 6.1 61 20-80 1-88 (293)
415 COG1179 Dinucleotide-utilizing 96.1 0.097 2.1E-06 37.7 8.9 85 17-102 30-156 (263)
416 PRK11207 tellurite resistance 96.1 0.037 7.9E-07 38.8 6.9 90 8-100 22-135 (197)
417 PRK14188 bifunctional 5,10-met 96.1 0.053 1.2E-06 40.5 7.9 77 15-102 156-233 (296)
418 PRK14190 bifunctional 5,10-met 96.1 0.14 3E-06 38.0 10.0 83 10-102 150-233 (284)
419 PRK14194 bifunctional 5,10-met 96.0 0.061 1.3E-06 40.2 8.2 82 10-102 151-234 (301)
420 TIGR02197 heptose_epim ADP-L-g 96.0 0.032 7E-07 41.7 7.0 59 20-78 1-75 (314)
421 PRK14169 bifunctional 5,10-met 96.0 0.062 1.3E-06 39.8 8.1 77 16-102 155-231 (282)
422 PF13561 adh_short_C2: Enoyl-( 96.0 0.065 1.4E-06 38.6 8.3 80 24-103 1-137 (241)
423 PRK13944 protein-L-isoaspartat 96.0 0.042 9.2E-07 38.8 7.1 89 9-99 65-173 (205)
424 PLN02583 cinnamoyl-CoA reducta 96.0 0.02 4.3E-07 42.8 5.6 36 15-50 4-39 (297)
425 PRK14967 putative methyltransf 96.0 0.062 1.3E-06 38.4 7.8 41 10-53 30-71 (223)
426 PRK11150 rfaD ADP-L-glycero-D- 96.0 0.04 8.7E-07 41.2 7.1 32 20-51 2-33 (308)
427 PLN02476 O-methyltransferase 96.0 0.091 2E-06 38.9 8.7 89 8-98 110-227 (278)
428 PRK14186 bifunctional 5,10-met 95.9 0.067 1.5E-06 39.9 8.0 83 10-102 150-233 (297)
429 PRK13656 trans-2-enoyl-CoA red 95.9 0.039 8.4E-07 42.7 7.0 34 15-49 39-74 (398)
430 PRK14183 bifunctional 5,10-met 95.9 0.14 3.1E-06 37.9 9.6 83 10-102 149-232 (281)
431 PRK08125 bifunctional UDP-gluc 95.9 0.037 7.9E-07 46.1 7.3 39 14-52 312-351 (660)
432 PRK05447 1-deoxy-D-xylulose 5- 95.9 0.12 2.7E-06 39.9 9.5 80 18-97 2-120 (385)
433 COG2519 GCD14 tRNA(1-methylade 95.9 0.062 1.3E-06 38.9 7.4 89 9-99 87-195 (256)
434 KOG4169 15-hydroxyprostaglandi 95.9 0.022 4.8E-07 40.6 5.1 62 17-78 5-92 (261)
435 PLN02968 Probable N-acetyl-gam 95.9 0.057 1.2E-06 41.9 7.8 85 17-101 38-136 (381)
436 PRK14170 bifunctional 5,10-met 95.9 0.067 1.5E-06 39.6 7.8 83 10-102 149-232 (284)
437 TIGR03589 PseB UDP-N-acetylglu 95.9 0.043 9.2E-07 41.5 7.0 36 16-51 3-40 (324)
438 PRK03369 murD UDP-N-acetylmura 95.9 0.036 7.9E-07 44.5 6.9 37 13-50 8-44 (488)
439 TIGR02355 moeB molybdopterin s 95.9 0.12 2.6E-06 37.5 9.0 34 17-51 24-58 (240)
440 PRK08219 short chain dehydroge 95.9 0.039 8.6E-07 39.0 6.5 62 17-79 3-81 (227)
441 cd01079 NAD_bind_m-THF_DH NAD 95.9 0.08 1.7E-06 36.9 7.6 86 15-101 60-158 (197)
442 PRK08328 hypothetical protein; 95.9 0.18 4E-06 36.3 9.9 34 17-51 27-61 (231)
443 PF01596 Methyltransf_3: O-met 95.8 0.027 5.8E-07 39.8 5.4 85 12-98 41-154 (205)
444 PF00899 ThiF: ThiF family; I 95.8 0.23 5E-06 32.4 9.6 33 17-50 2-35 (135)
445 PRK14171 bifunctional 5,10-met 95.8 0.17 3.6E-06 37.7 9.6 77 16-102 158-234 (288)
446 TIGR00080 pimt protein-L-isoas 95.8 0.039 8.4E-07 39.2 6.2 91 7-99 68-177 (215)
447 PLN02986 cinnamyl-alcohol dehy 95.8 0.029 6.3E-07 42.2 5.8 37 16-52 4-40 (322)
448 KOG1199 Short-chain alcohol de 95.8 0.045 9.7E-07 37.4 6.0 65 15-79 7-93 (260)
449 PRK09009 C factor cell-cell si 95.8 0.084 1.8E-06 37.7 8.0 60 19-79 2-77 (235)
450 PRK00048 dihydrodipicolinate r 95.8 0.39 8.4E-06 35.2 11.4 81 19-100 3-91 (257)
451 TIGR01181 dTDP_gluc_dehyt dTDP 95.8 0.038 8.3E-07 41.2 6.3 31 19-49 1-33 (317)
452 PLN02653 GDP-mannose 4,6-dehyd 95.8 0.024 5.2E-07 43.1 5.3 36 16-51 5-40 (340)
453 PF02737 3HCDH_N: 3-hydroxyacy 95.7 0.12 2.6E-06 35.7 8.2 34 19-53 1-34 (180)
454 PRK14179 bifunctional 5,10-met 95.7 0.08 1.7E-06 39.3 7.7 82 10-102 150-233 (284)
455 TIGR03466 HpnA hopanoid-associ 95.7 0.043 9.2E-07 41.2 6.5 35 19-53 2-36 (328)
456 PLN02589 caffeoyl-CoA O-methyl 95.7 0.13 2.8E-06 37.5 8.7 87 9-97 72-188 (247)
457 PLN02989 cinnamyl-alcohol dehy 95.7 0.029 6.4E-07 42.2 5.6 37 16-52 4-40 (325)
458 PF13478 XdhC_C: XdhC Rossmann 95.7 0.093 2E-06 34.5 7.2 33 20-53 1-33 (136)
459 TIGR01830 3oxo_ACP_reduc 3-oxo 95.7 0.039 8.4E-07 39.4 6.0 32 20-51 1-32 (239)
460 PRK15116 sulfur acceptor prote 95.7 0.11 2.4E-06 38.2 8.3 34 16-50 29-63 (268)
461 PLN03139 formate dehydrogenase 95.7 0.11 2.4E-06 40.4 8.7 84 16-101 198-293 (386)
462 TIGR00521 coaBC_dfp phosphopan 95.7 0.075 1.6E-06 41.4 7.8 65 15-79 183-275 (390)
463 TIGR02356 adenyl_thiF thiazole 95.7 0.14 3E-06 36.1 8.5 34 16-50 20-54 (202)
464 PRK07041 short chain dehydroge 95.7 0.031 6.7E-07 39.8 5.4 31 21-51 1-31 (230)
465 PLN02662 cinnamyl-alcohol dehy 95.7 0.029 6.4E-07 42.1 5.5 37 16-52 3-39 (322)
466 cd00755 YgdL_like Family of ac 95.7 0.1 2.3E-06 37.6 7.9 33 17-50 11-44 (231)
467 PLN00015 protochlorophyllide r 95.7 0.028 6.2E-07 42.1 5.3 32 21-52 1-33 (308)
468 PRK14030 glutamate dehydrogena 95.7 0.43 9.2E-06 37.8 11.8 37 16-53 227-263 (445)
469 PRK08317 hypothetical protein; 95.7 0.099 2.2E-06 37.3 8.0 89 9-99 12-124 (241)
470 PRK10217 dTDP-glucose 4,6-dehy 95.7 0.049 1.1E-06 41.6 6.6 30 18-47 2-31 (355)
471 COG1648 CysG Siroheme synthase 95.6 0.3 6.5E-06 34.7 10.0 86 16-102 11-106 (210)
472 PRK15409 bifunctional glyoxyla 95.6 0.097 2.1E-06 39.7 8.0 80 16-101 144-238 (323)
473 PRK11790 D-3-phosphoglycerate 95.6 0.1 2.2E-06 40.9 8.4 78 16-99 150-239 (409)
474 PRK12859 3-ketoacyl-(acyl-carr 95.6 0.072 1.6E-06 38.7 7.2 34 16-49 5-40 (256)
475 PRK07574 formate dehydrogenase 95.6 0.12 2.6E-06 40.1 8.6 84 16-101 191-286 (385)
476 PRK14166 bifunctional 5,10-met 95.6 0.11 2.4E-06 38.5 8.0 77 16-102 156-232 (282)
477 PLN02516 methylenetetrahydrofo 95.6 0.23 5E-06 37.1 9.7 77 16-102 166-242 (299)
478 PRK06924 short chain dehydroge 95.6 0.032 7E-07 40.3 5.2 34 18-51 2-35 (251)
479 TIGR00477 tehB tellurite resis 95.6 0.098 2.1E-06 36.6 7.5 92 5-99 19-133 (195)
480 PLN02778 3,5-epimerase/4-reduc 95.6 0.096 2.1E-06 39.2 7.8 59 16-78 8-66 (298)
481 PRK14187 bifunctional 5,10-met 95.6 0.11 2.4E-06 38.7 7.9 78 15-102 158-235 (294)
482 PRK08655 prephenate dehydrogen 95.6 0.11 2.4E-06 41.1 8.4 80 19-100 2-93 (437)
483 PRK15438 erythronate-4-phospha 95.5 0.15 3.2E-06 39.5 8.8 79 16-100 115-208 (378)
484 PLN02166 dTDP-glucose 4,6-dehy 95.5 0.061 1.3E-06 42.6 6.8 35 16-50 119-153 (436)
485 COG0136 Asd Aspartate-semialde 95.5 0.082 1.8E-06 39.9 7.1 76 18-93 2-90 (334)
486 PRK14193 bifunctional 5,10-met 95.5 0.24 5.2E-06 36.8 9.4 83 10-102 150-235 (284)
487 PLN02897 tetrahydrofolate dehy 95.5 0.1 2.2E-06 39.7 7.6 77 16-102 213-289 (345)
488 PF05368 NmrA: NmrA-like famil 95.5 0.081 1.8E-06 37.9 7.0 58 20-78 1-73 (233)
489 TIGR01179 galE UDP-glucose-4-e 95.5 0.056 1.2E-06 40.5 6.4 31 19-49 1-31 (328)
490 PRK08223 hypothetical protein; 95.5 0.23 5E-06 37.0 9.3 33 17-50 27-60 (287)
491 PRK10675 UDP-galactose-4-epime 95.5 0.081 1.8E-06 40.0 7.2 32 19-50 2-33 (338)
492 PF08659 KR: KR domain; Inter 95.5 0.089 1.9E-06 36.3 6.8 76 19-95 2-82 (181)
493 PLN02366 spermidine synthase 95.4 0.12 2.7E-06 38.9 7.9 83 15-99 90-206 (308)
494 KOG1207 Diacetyl reductase/L-x 95.4 0.028 6E-07 38.5 3.9 38 16-53 6-43 (245)
495 PRK10637 cysG siroheme synthas 95.4 0.47 1E-05 37.9 11.5 82 16-101 11-105 (457)
496 COG0031 CysK Cysteine synthase 95.4 0.3 6.5E-06 36.5 9.6 42 10-52 55-96 (300)
497 PF07991 IlvN: Acetohydroxy ac 95.4 0.34 7.4E-06 32.8 9.0 77 16-98 3-94 (165)
498 TIGR01472 gmd GDP-mannose 4,6- 95.4 0.04 8.7E-07 41.9 5.3 34 18-51 1-34 (343)
499 TIGR00507 aroE shikimate 5-deh 95.4 0.059 1.3E-06 39.7 6.0 85 14-100 114-215 (270)
500 PLN02896 cinnamyl-alcohol dehy 95.4 0.041 8.8E-07 42.1 5.3 37 15-51 8-44 (353)
No 1
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.96 E-value=1.6e-27 Score=166.25 Aligned_cols=171 Identities=22% Similarity=0.254 Sum_probs=147.4
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
+|||..+.+-.++++|++||++.|+|++|+++.|++|..|+.+|++++++++ +.+|+.+++.+++
T Consensus 132 lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiT 211 (336)
T KOG1197|consen 132 LTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKIT 211 (336)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhcc
Confidence 6899999888899999999999999999999999999999999999999887 5689999999999
Q ss_pred CC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch---HHHHHHHHH
Q 041355 67 PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY---YHLYLKFLE 142 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 142 (180)
++ |+|+++|++|.+++...+.+|++.|+++.+|+..+ ..+++.+..+..+.+.+.......+ .........
T Consensus 212 ngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~asg-----l~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~ 286 (336)
T KOG1197|consen 212 NGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNASG-----LIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVA 286 (336)
T ss_pred CCCCceeeeccccchhhHHHHHHhccCceEEEeccccC-----CCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHH
Confidence 88 99999999999999999999999999999998774 3445556666666666554443332 334445677
Q ss_pred HHHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 143 LVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 143 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++.++.+|.+++.+.++|||+++.+|+..++++.
T Consensus 287 rl~alvnsg~lk~~I~~~ypls~vadA~~diesrk 321 (336)
T KOG1197|consen 287 RLFALVNSGHLKIHIDHVYPLSKVADAHADIESRK 321 (336)
T ss_pred HHHHHhhcCccceeeeeecchHHHHHHHHHHHhhh
Confidence 88899999999999999999999999999999885
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=99.95 E-value=3.1e-26 Score=171.20 Aligned_cols=166 Identities=28% Similarity=0.336 Sum_probs=139.6
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
+|||+++.+..++++|++|||+||+|+||.+++|+||.+|++++++++++++ .++++.+.+++.+
T Consensus 128 ~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t 207 (326)
T COG0604 128 LTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELT 207 (326)
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHc
Confidence 6999999998999999999999999999999999999999876666666554 4566999999999
Q ss_pred CC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch-HHHHHHHHHHH
Q 041355 67 PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYLKFLELV 144 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 144 (180)
++ ++|+++|++|++++...+.+|+++|+++.++...+ ......+...++.+.++..+...... ++...+.++++
T Consensus 208 ~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~~g----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l 283 (326)
T COG0604 208 GGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGALSG----GPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAEL 283 (326)
T ss_pred CCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecCCC----CCccccCHHHHhhccEEEEEecceecchHHHHHHHHHH
Confidence 98 99999999999999999999999999999998763 12233446667778888887777642 24556789999
Q ss_pred HHHHHCCCccceeeeecchhhHHHHHH
Q 041355 145 IPAIREGKMVYVEDIAEGLEKISRNCY 171 (180)
Q Consensus 145 ~~~~~~g~~~~~~~~~~~~~~~~~a~~ 171 (180)
.+++++|.++|.++.+||+++..++..
T Consensus 284 ~~~~~~g~l~~~i~~~~~l~e~~~a~a 310 (326)
T COG0604 284 FDLLASGKLKPVIDRVYPLAEAPAAAA 310 (326)
T ss_pred HHHHHcCCCcceeccEechhhhHHHHH
Confidence 999999999999999999999554444
No 3
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.95 E-value=2.7e-26 Score=163.82 Aligned_cols=178 Identities=45% Similarity=0.656 Sum_probs=157.9
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC----------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~----------------~~~~~~~~~~~~ 65 (180)
+|||.+|.+.+++++|++++|.+|+|++|..+.|+||..|++|+.++.++++ +.+++.+.+.+.
T Consensus 136 ~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a 215 (340)
T COG2130 136 LTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEA 215 (340)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999997 567999999999
Q ss_pred cCCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCC-CccccchHHHhhcCcEEEeeecc-chHHHHHHHHHH
Q 041355 66 FPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEK-PEGVHNLEQLIGKRIRLEGFLAG-DYYHLYLKFLEL 143 (180)
Q Consensus 66 ~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 143 (180)
++.++|+.||++|++.++.++..|+..+|++.+|....++... +..+.+...++.+.+++.|+-.. .+.....+..++
T Consensus 216 ~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~ 295 (340)
T COG2130 216 CPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRE 295 (340)
T ss_pred CCCCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHH
Confidence 9999999999999999999999999999999999998886553 22344556677788999999984 445556689999
Q ss_pred HHHHHHCCCccceeeeecchhhHHHHHHHHHhhhcc
Q 041355 144 VIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRVKK 179 (180)
Q Consensus 144 ~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~~~ 179 (180)
+.+|+.+|+|+-..+.+-.|+.+++||.-|-++.+.
T Consensus 296 l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~ 331 (340)
T COG2130 296 LGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNF 331 (340)
T ss_pred HHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCcc
Confidence 999999999999987777899999999988887653
No 4
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=99.95 E-value=8.6e-26 Score=171.00 Aligned_cols=176 Identities=60% Similarity=0.953 Sum_probs=141.8
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC----------------Cc-chHHHHHHh
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----------------EE-PDLDAALKR 64 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~----------------~~-~~~~~~~~~ 64 (180)
+|||+++.+..++++|++|+|+|++|++|++++|+||.+|++|+++++++++ ++ .++.+.+++
T Consensus 144 ~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~ 223 (348)
T PLN03154 144 FTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKR 223 (348)
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHH
Confidence 6889999888899999999999999999999999999999999998877543 11 256666777
Q ss_pred HcCCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHH
Q 041355 65 WFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELV 144 (180)
Q Consensus 65 ~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (180)
.+++++|++|||+|+..+..++.+++++|+++.+|...+..........++..++.+++++.|+....+.....+.++++
T Consensus 224 ~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~ 303 (348)
T PLN03154 224 YFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENV 303 (348)
T ss_pred HCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHH
Confidence 76668999999999888999999999999999998754321100001224566778889999887654433345678889
Q ss_pred HHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 145 IPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 145 ~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
.+++++|++++.++.+++|+++++|++.++++.
T Consensus 304 ~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~ 336 (348)
T PLN03154 304 SRYYKQGKIVYIEDMSEGLESAPAALVGLFSGK 336 (348)
T ss_pred HHHHHCCCccCceecccCHHHHHHHHHHHHcCC
Confidence 999999999998888999999999999998874
No 5
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=99.93 E-value=9.1e-25 Score=160.95 Aligned_cols=161 Identities=24% Similarity=0.267 Sum_probs=137.4
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
.|+|+++ +..+++||++|+|+| .|++|++++|+||++|++|+++++++++ .+++..+.+++.
T Consensus 153 iT~y~al-k~~~~~pG~~V~I~G-~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~- 229 (339)
T COG1064 153 ITTYRAL-KKANVKPGKWVAVVG-AGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEI- 229 (339)
T ss_pred eeEeeeh-hhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhh-
Confidence 4788999 669999999999999 6799999999999999999999999886 223444444443
Q ss_pred CCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHHH
Q 041355 67 PQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIP 146 (180)
Q Consensus 67 ~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (180)
+|+++||++..+++..++.|+++|+++.+|.... .+....+...++.+++++.|+...+ +..++++++
T Consensus 230 ---~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~----~~~~~~~~~~li~~~~~i~GS~~g~-----~~d~~e~l~ 297 (339)
T COG1064 230 ---ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGG----GPIPLLPAFLLILKEISIVGSLVGT-----RADLEEALD 297 (339)
T ss_pred ---CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCC----cccCCCCHHHhhhcCeEEEEEecCC-----HHHHHHHHH
Confidence 9999999995599999999999999999998741 1233456677899999999999987 566889999
Q ss_pred HHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 147 AIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+..+|+++|.+.+.++++++++|+++|+++.
T Consensus 298 f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~ 328 (339)
T COG1064 298 FAAEGKIKPEILETIPLDEINEAYERMEKGK 328 (339)
T ss_pred HHHhCCceeeEEeeECHHHHHHHHHHHHcCC
Confidence 9999999999978899999999999999875
No 6
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=99.93 E-value=8e-24 Score=159.02 Aligned_cols=176 Identities=40% Similarity=0.638 Sum_probs=139.9
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++||+++.+..++++|++++|+||+|++|++++|+|+.+|++|+++++++++ .++++.+.+++.+
T Consensus 129 ~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~ 208 (329)
T cd08294 129 LTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAA 208 (329)
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHC
Confidence 6899999888999999999999999999999999999999999999887654 3356777777777
Q ss_pred CCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCc-cccchHHHhhcCcEEEeeeccchHHHHHHHHHHHH
Q 041355 67 PQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPE-GVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVI 145 (180)
Q Consensus 67 ~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (180)
++++|++|||+|++.+...+++++++|+++.+|........... .......+..+++++.++....+.....+.++++.
T Consensus 209 ~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 288 (329)
T cd08294 209 PDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLL 288 (329)
T ss_pred CCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHH
Confidence 66899999999998889999999999999999864322111111 12233456777888888765443233456788899
Q ss_pred HHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 146 PAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++.+|.+++....+++++++++|++.++++.
T Consensus 289 ~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~ 320 (329)
T cd08294 289 KWIKEGKLKYREHVTEGFENMPQAFIGMLKGE 320 (329)
T ss_pred HHHHCCCCcCCcccccCHHHHHHHHHHHHcCC
Confidence 99999999987667799999999999988764
No 7
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.93 E-value=4e-24 Score=152.39 Aligned_cols=178 Identities=67% Similarity=1.024 Sum_probs=158.8
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-----------------CcchHHHHHHh
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-----------------EEPDLDAALKR 64 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-----------------~~~~~~~~~~~ 64 (180)
+|||..+.+.+.++.|++++|.||+|++|+++-|+||.+|++|++++.++++ ++.+..+.+++
T Consensus 139 lTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r 218 (343)
T KOG1196|consen 139 LTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKR 218 (343)
T ss_pred hHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999997 33477888888
Q ss_pred HcCCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHH
Q 041355 65 WFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELV 144 (180)
Q Consensus 65 ~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (180)
-.+.++|+.||.+|+..++..+..++..||++.+|....++...+..-.+....+.+++.+.|+..........+.++.+
T Consensus 219 ~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l 298 (343)
T KOG1196|consen 219 CFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFL 298 (343)
T ss_pred hCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHH
Confidence 88889999999999999999999999999999999988887666655566778889999999988877766678899999
Q ss_pred HHHHHCCCccceeeeecchhhHHHHHHHHHhhhcc
Q 041355 145 IPAIREGKMVYVEDIAEGLEKISRNCYTLKWRVKK 179 (180)
Q Consensus 145 ~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~~~ 179 (180)
..++.+|+|+-..+-.-.|+..++|+.-|-+|++.
T Consensus 299 ~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNv 333 (343)
T KOG1196|consen 299 LPYIKEGKITYVEDIADGLENGPSALVGLFHGKNV 333 (343)
T ss_pred HHHHhcCceEEehhHHHHHhccHHHHHHHhccCcc
Confidence 99999999998876667799999999988887643
No 8
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=99.92 E-value=1.3e-23 Score=158.55 Aligned_cols=176 Identities=66% Similarity=0.998 Sum_probs=137.7
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC----------------C-cchHHHHHHh
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----------------E-EPDLDAALKR 64 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~----------------~-~~~~~~~~~~ 64 (180)
++||+++.+..++++|++|+|+||+|++|++++|+||.+|++|+++++++++ . +.++.+.+++
T Consensus 137 ~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~ 216 (338)
T cd08295 137 LTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKR 216 (338)
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHH
Confidence 6899999888899999999999999999999999999999999998877543 1 1255666676
Q ss_pred HcCCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHH
Q 041355 65 WFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELV 144 (180)
Q Consensus 65 ~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (180)
.+++++|++|||+|+..+..++.+++++|+++.+|..............+....+.+++++.++....+.....+.++++
T Consensus 217 ~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 296 (338)
T cd08295 217 YFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEM 296 (338)
T ss_pred hCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHH
Confidence 66568999999999988999999999999999998654321100001123355667778888766544333345678889
Q ss_pred HHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 145 IPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 145 ~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
++++.+|.+++.+..+|+++++++|++.++++.
T Consensus 297 ~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~ 329 (338)
T cd08295 297 SGYIKEGKLKYVEDIADGLESAPEAFVGLFTGS 329 (338)
T ss_pred HHHHHCCCeEceeecccCHHHHHHHHHHHhcCC
Confidence 999999999987777899999999999988763
No 9
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=99.92 E-value=1.1e-23 Score=158.30 Aligned_cols=176 Identities=39% Similarity=0.577 Sum_probs=135.9
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------Cc-chHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EE-PDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~-~~~~~~~~~~ 65 (180)
++||+++.+..++++|++|||+||+|++|++++|+||..|++|+++++++++ ++ ..+.+.++..
T Consensus 124 ~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~ 203 (325)
T TIGR02825 124 LTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKA 203 (325)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHh
Confidence 6899999888999999999999999999999999999999999999887654 12 2344455555
Q ss_pred cCCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCcc-ccchHHHhhcCcEEEeeeccch-HHHHHHHHHH
Q 041355 66 FPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEG-VHNLEQLIGKRIRLEGFLAGDY-YHLYLKFLEL 143 (180)
Q Consensus 66 ~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 143 (180)
+++++|++|||+|++.+...+++++++|+++.+|............ ......++.+++++.++....+ .....+.+++
T Consensus 204 ~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 283 (325)
T TIGR02825 204 SPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKE 283 (325)
T ss_pred CCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHH
Confidence 5558999999999988899999999999999998654321100011 1123445667788887765332 2223456888
Q ss_pred HHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 144 VIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 144 ~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++++.+|++++.+..+++++++++|++.++++.
T Consensus 284 ~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~ 317 (325)
T TIGR02825 284 LLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGE 317 (325)
T ss_pred HHHHHHCCCcccceeccccHHHHHHHHHHHhcCC
Confidence 9999999999988778899999999999988764
No 10
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=99.91 E-value=3e-23 Score=150.76 Aligned_cols=168 Identities=20% Similarity=0.134 Sum_probs=144.2
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------Ccc-hHHHHHHh
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EEP-DLDAALKR 64 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~~-~~~~~~~~ 64 (180)
+|.+-+..+..++++|+++.|+| .|++|++++|-|+..|+ +||+++..+++ ++. ++.+.+++
T Consensus 171 ~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~~~~vv~~i~~ 249 (366)
T COG1062 171 TTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVDDVVEAIVE 249 (366)
T ss_pred ccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchhhhhHHHHHHH
Confidence 46677788999999999999999 99999999999999999 89999999887 223 68889999
Q ss_pred HcCCCccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 65 WFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 65 ~~~~~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
.|++++|++|||+|+. .+..++.++.++|+.+.+|.... ......++.+++.. .+++|+.+.... .+.++..
T Consensus 250 ~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~----~~~i~~~~~~lv~g-r~~~Gs~~G~~~--p~~diP~ 322 (366)
T COG1062 250 LTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGA----GQEISTRPFQLVTG-RVWKGSAFGGAR--PRSDIPR 322 (366)
T ss_pred hcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCC----CceeecChHHeecc-ceEEEEeecCCc--cccchhH
Confidence 9999999999999976 89999999999999999998764 22334566667766 889999987642 3566889
Q ss_pred HHHHHHCCCccc--eeeeecchhhHHHHHHHHHhhh
Q 041355 144 VIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 144 ~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++++.+|+|.. +++++++|+|++|||++|++++
T Consensus 323 lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~ 358 (366)
T COG1062 323 LVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGK 358 (366)
T ss_pred HHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCc
Confidence 999999999875 7899999999999999999885
No 11
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=99.91 E-value=1.2e-22 Score=155.10 Aligned_cols=169 Identities=18% Similarity=0.151 Sum_probs=136.7
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++||+++.+..++++|++|+|.| +|++|++++|+||.+|+ +|+++++++++ .++++.+.+++.
T Consensus 177 ~ta~~~~~~~~~i~~g~~VlV~G-~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~ 255 (371)
T cd08281 177 LTGVGAVVNTAGVRPGQSVAVVG-LGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVREL 255 (371)
T ss_pred HHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHH
Confidence 57888887888899999999998 69999999999999999 69888877655 234566777777
Q ss_pred cCCCccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHH
Q 041355 66 FPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELV 144 (180)
Q Consensus 66 ~~~~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (180)
+++++|++|||+|.. .+..++++++++|+++.+|..... ....++...++.+++++.++....+. .++.+.++
T Consensus 256 ~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~ 329 (371)
T cd08281 256 TGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPE----ARLSVPALSLVAEERTLKGSYMGSCV--PRRDIPRY 329 (371)
T ss_pred hCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCC----ceeeecHHHHhhcCCEEEEEecCCCC--hHHHHHHH
Confidence 766899999999965 888899999999999999865421 12244566778899999998765431 13457788
Q ss_pred HHHHHCCCccc--eeeeecchhhHHHHHHHHHhhh
Q 041355 145 IPAIREGKMVY--VEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 145 ~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
++++.+|++++ +++++|+++++++||+.++++.
T Consensus 330 ~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~ 364 (371)
T cd08281 330 LALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGE 364 (371)
T ss_pred HHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCC
Confidence 99999999975 6789999999999999988764
No 12
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.91 E-value=4.2e-23 Score=154.78 Aligned_cols=172 Identities=23% Similarity=0.278 Sum_probs=128.5
Q ss_pred chHHHHHHHHc------CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC--------------CcchHHH
Q 041355 2 LIVGNLIILVC------SPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK--------------EEPDLDA 60 (180)
Q Consensus 2 l~a~~~l~~~~------~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~--------------~~~~~~~ 60 (180)
++||.++.... ++++|++|||+||+|+||++++|+||++|+ .|+++++.+.. +++++.+
T Consensus 137 ~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e 216 (347)
T KOG1198|consen 137 LTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVE 216 (347)
T ss_pred HHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHH
Confidence 68999999999 899999999999999999999999999995 66666666554 6678899
Q ss_pred HHHhHcCCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEE-----Eeeeccc-hH
Q 041355 61 ALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRL-----EGFLAGD-YY 134 (180)
Q Consensus 61 ~~~~~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~ 134 (180)
.+++.+.++||++|||+|+......+.+++.+|+...++............ ..++ ..+.+++ .+..... ..
T Consensus 217 ~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
T KOG1198|consen 217 LIKKYTGKGVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKLD--DLWQ-SANGIKLYSLGLKGVNYRWLYF 293 (347)
T ss_pred HHHhhcCCCccEEEECCCCCccccchhhhccCCceEEEEeccccccccccc--cchh-hhhhhhheeeeeeccceeeeee
Confidence 999988559999999999988888888998888766665554322111111 1111 1111111 1111111 12
Q ss_pred HHHHHHHHHHHHHHHCCCccceeeeecchhhHHHHHHHHHhh
Q 041355 135 HLYLKFLELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 135 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
....+.++.+.+++++|+++|.+.++||++++.+|++.+.++
T Consensus 294 ~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~ 335 (347)
T KOG1198|consen 294 VPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKS 335 (347)
T ss_pred cCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhc
Confidence 234677899999999999999999999999999999988774
No 13
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=99.90 E-value=2.7e-22 Score=152.55 Aligned_cols=168 Identities=17% Similarity=0.181 Sum_probs=133.7
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++||+++.+...+++|++|+|+| +|++|++++|+||.+|+ +|+++++++++ .++++.+.+++.
T Consensus 162 ~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~i~~~ 240 (358)
T TIGR03451 162 MAGLGAAVNTGGVKRGDSVAVIG-CGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRAL 240 (358)
T ss_pred hhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHHHHHH
Confidence 46677877788899999999998 69999999999999999 58888877654 234566778877
Q ss_pred cCC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
+++ ++|++|||+|++ .+..++.+++++|+++.+|..... ....+++..++.+++++.+.+..... ..+.+++
T Consensus 241 ~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~ 314 (358)
T TIGR03451 241 TGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPD----MTLELPLLDVFGRGGALKSSWYGDCL--PERDFPM 314 (358)
T ss_pred hCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC----ceeeccHHHHhhcCCEEEEeecCCCC--cHHHHHH
Confidence 776 899999999975 888899999999999999875321 11234555677888888887643211 2345788
Q ss_pred HHHHHHCCCccc--eeeeecchhhHHHHHHHHHhh
Q 041355 144 VIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 144 ~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~ 176 (180)
+++++.+|.+++ +++++||++++++|++.++++
T Consensus 315 ~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~ 349 (358)
T TIGR03451 315 LVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAG 349 (358)
T ss_pred HHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCC
Confidence 999999999975 688999999999999988776
No 14
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.90 E-value=6.3e-23 Score=167.06 Aligned_cols=172 Identities=19% Similarity=0.224 Sum_probs=146.0
Q ss_pred CchHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-------------------CcchHHHH
Q 041355 1 MLIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-------------------EEPDLDAA 61 (180)
Q Consensus 1 ~l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-------------------~~~~~~~~ 61 (180)
+.||||+++.++..++|++|||++|+|+||++||.+|.++|++|+.++.+.++ ++.++...
T Consensus 1537 YsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~ 1616 (2376)
T KOG1202|consen 1537 YSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQH 1616 (2376)
T ss_pred eeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHH
Confidence 35899999999999999999999999999999999999999999999999887 56788899
Q ss_pred HHhHcCC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHH----
Q 041355 62 LKRWFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHL---- 136 (180)
Q Consensus 62 ~~~~~~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 136 (180)
+++.|+| |+|+++++...+.++..++||+-+||+..+|...-.+.+ ++. ...+.++.+++|...+...+-
T Consensus 1617 vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDLSqNs----pLG-MavfLkNvsfHGiLLDsvmege~e~ 1691 (2376)
T KOG1202|consen 1617 VLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDLSQNS----PLG-MAVFLKNVSFHGILLDSVMEGEEEM 1691 (2376)
T ss_pred HHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecceecccCC----cch-hhhhhcccceeeeehhhhhcCcHHH
Confidence 9999998 999999999999999999999999999999865432211 222 467889999999998876322
Q ss_pred HHHHHHHHHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 137 YLKFLELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 137 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
.++.+..+.+-+.+|.++|+.+++|+-.++++||+.|.+|+
T Consensus 1692 ~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGK 1732 (2376)
T KOG1202|consen 1692 WREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGK 1732 (2376)
T ss_pred HHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccC
Confidence 23344444555666788999999999999999999999885
No 15
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=99.90 E-value=7.3e-22 Score=149.40 Aligned_cols=176 Identities=32% Similarity=0.465 Sum_probs=129.8
Q ss_pred chHHHHHHHHcCCCCC--CEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC----------------CcchHHHHH
Q 041355 2 LIVGNLIILVCSPKKG--EYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK----------------EEPDLDAAL 62 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g--~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~----------------~~~~~~~~~ 62 (180)
++||+++.+..++++| ++|||+||+|++|++++|+||.+|+ +|+++++++++ .++++.+.+
T Consensus 138 ~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i 217 (345)
T cd08293 138 LTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERL 217 (345)
T ss_pred HHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHH
Confidence 5788998888888877 9999999999999999999999999 89999887654 234667777
Q ss_pred HhHcCCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCc-cccc--hHHH-hhcCcEEEeeeccchHHHHH
Q 041355 63 KRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPE-GVHN--LEQL-IGKRIRLEGFLAGDYYHLYL 138 (180)
Q Consensus 63 ~~~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~ 138 (180)
++.+++++|++|||+|+..+..++.+++++|+++.+|........... .... .... ....+++.++..........
T Consensus 218 ~~~~~~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (345)
T cd08293 218 RELCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFE 297 (345)
T ss_pred HHHCCCCceEEEECCCcHHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHH
Confidence 777766899999999988888999999999999999854321100000 1111 1111 22344444433222233345
Q ss_pred HHHHHHHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 139 KFLELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 139 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+.++++.+++.+|.+++.+..+++++++++|++.++++.
T Consensus 298 ~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~ 336 (345)
T cd08293 298 EAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGG 336 (345)
T ss_pred HHHHHHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCC
Confidence 678889999999999987666679999999999988763
No 16
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.89 E-value=1.5e-21 Score=140.31 Aligned_cols=168 Identities=18% Similarity=0.137 Sum_probs=140.6
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC-------------Ccc----hHHHHHH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK-------------EEP----DLDAALK 63 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~-------------~~~----~~~~~~~ 63 (180)
.|+|-+..+.+++++|+++.|+| .|+||++++|-||+.|+ ++|+++-++++ ++. ...+.++
T Consensus 178 sTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~ 256 (375)
T KOG0022|consen 178 STGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLKKPIQEVII 256 (375)
T ss_pred cccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhccccHHHHHH
Confidence 46778888999999999999999 99999999999999999 99999999887 222 3567789
Q ss_pred hHcCCCccEEEeCCChh-hHHHHHHhhccC-CEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHH
Q 041355 64 RWFPQGIDIYFENVGGK-MLDAVLLNMRLR-GRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFL 141 (180)
Q Consensus 64 ~~~~~~~d~~~d~~g~~-~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (180)
++|++++|+.|||+|+. ++..++.+.+.+ |+.+.+|.... .......++.++. ..++.|..+..++ .+..+
T Consensus 257 EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~----~~~i~~~p~~l~~-GR~~~Gs~FGG~K--~~~~i 329 (375)
T KOG0022|consen 257 EMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAA----GQEISTRPFQLVT-GRTWKGSAFGGFK--SKSDI 329 (375)
T ss_pred HHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCC----Ccccccchhhhcc-ccEEEEEeccccc--chhhh
Confidence 99999999999999987 888999999888 99999998764 2334555555554 6788898888863 25667
Q ss_pred HHHHHHHHCCCcc--ceeeeecchhhHHHHHHHHHhhh
Q 041355 142 ELVIPAIREGKMV--YVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 142 ~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
..+++.+.+++++ ..+++.+||+++++||++|.+++
T Consensus 330 P~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gk 367 (375)
T KOG0022|consen 330 PKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGK 367 (375)
T ss_pred hHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCc
Confidence 7888888888775 58999999999999999999875
No 17
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=99.88 E-value=4.4e-21 Score=144.07 Aligned_cols=169 Identities=20% Similarity=0.258 Sum_probs=130.6
Q ss_pred chHHHHHHHHcCCCCCCEEEEe-cCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVS-AASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~-Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++||..+ +..++ ++++++|+ ||+|++|++++|+||.+|++|+++++++++ ..+++.+.+++.
T Consensus 130 ~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~ 207 (324)
T cd08291 130 LTALGML-ETARE-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKEL 207 (324)
T ss_pred HHHHHHH-Hhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHH
Confidence 4565443 55555 55566665 889999999999999999999998887654 335677788888
Q ss_pred cCC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchH-HHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYY-HLYLKFLEL 143 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 143 (180)
+++ ++|++|||+|+......+.+++++|+++.+|...... ...++....+.+++++.++....+. ....+.+++
T Consensus 208 ~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (324)
T cd08291 208 IAKLNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSGKL----DEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKK 283 (324)
T ss_pred hCCCCCcEEEECCCcHHHHHHHHhhCCCCEEEEEEecCCCC----cccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHH
Confidence 776 8999999999888888899999999999998654321 1124455677889999888765431 112456788
Q ss_pred HHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 144 VIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 144 ~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+.+++. +.+++.++++|+++++++|++.++++.
T Consensus 284 ~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~ 316 (324)
T cd08291 284 LKKLVK-TELKTTFASRYPLALTLEAIAFYSKNM 316 (324)
T ss_pred HHHHHh-CccccceeeEEcHHHHHHHHHHHHhCC
Confidence 888888 999999999999999999999998864
No 18
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.88 E-value=2.3e-21 Score=139.97 Aligned_cols=164 Identities=18% Similarity=0.177 Sum_probs=135.6
Q ss_pred CchHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC----------------C---cchHHH
Q 041355 1 MLIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK----------------E---EPDLDA 60 (180)
Q Consensus 1 ~l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~----------------~---~~~~~~ 60 (180)
|.++||+. +++++++|+++||+| +|++|+++...||.+|+ +|++++-.+++ . .+++.+
T Consensus 155 LsV~~HAc-r~~~vk~Gs~vLV~G-AGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~ 232 (354)
T KOG0024|consen 155 LSVGVHAC-RRAGVKKGSKVLVLG-AGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAE 232 (354)
T ss_pred hhhhhhhh-hhcCcccCCeEEEEC-CcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHH
Confidence 46789999 889999999999999 89999999999999999 89998888876 1 133444
Q ss_pred HHHhHcCC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHH
Q 041355 61 ALKRWFPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYL 138 (180)
Q Consensus 61 ~~~~~~~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (180)
.+.+..+. .+|+.|||+|.+ +++.++..++.+|+++..+... ....+++.....+++++.|..-.. +
T Consensus 233 ~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~------~~~~fpi~~v~~kE~~~~g~fry~-----~ 301 (354)
T KOG0024|consen 233 LVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGA------EEIQFPIIDVALKEVDLRGSFRYC-----N 301 (354)
T ss_pred HHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCC------CccccChhhhhhheeeeeeeeeec-----c
Confidence 45544443 699999999987 8999999999999987776543 244667788899999998877633 4
Q ss_pred HHHHHHHHHHHCCCcc--ceeeeecchhhHHHHHHHHHhhh
Q 041355 139 KFLELVIPAIREGKMV--YVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 139 ~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
..+..+++++.+|++. +++++.|++++..+||+.+..+.
T Consensus 302 ~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~ 342 (354)
T KOG0024|consen 302 GDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGE 342 (354)
T ss_pred ccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCc
Confidence 5788999999999885 58999999999999999887764
No 19
>PLN02827 Alcohol dehydrogenase-like
Probab=99.88 E-value=5e-21 Score=146.50 Aligned_cols=167 Identities=20% Similarity=0.163 Sum_probs=129.7
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------Cc--chHHHHHH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EE--PDLDAALK 63 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~--~~~~~~~~ 63 (180)
+++|+++.+..++++|++|+|+| +|++|++++|+||.+|+ .|+++++++++ .+ +++.+.++
T Consensus 179 ~~a~~~~~~~~~~~~g~~VlV~G-~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~ 257 (378)
T PLN02827 179 AAGLGAAWNVADVSKGSSVVIFG-LGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLSEPIQQVIK 257 (378)
T ss_pred HhhHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccccchHHHHHHH
Confidence 35566666677899999999998 69999999999999999 57777655544 11 24556677
Q ss_pred hHcCCCccEEEeCCChh-hHHHHHHhhccC-CEEEEEeccccccCCCCccccch-HHHhhcCcEEEeeeccchHHHHHHH
Q 041355 64 RWFPQGIDIYFENVGGK-MLDAVLLNMRLR-GRIAVSSIISQYNLEKPEGVHNL-EQLIGKRIRLEGFLAGDYYHLYLKF 140 (180)
Q Consensus 64 ~~~~~~~d~~~d~~g~~-~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (180)
+.+++++|++|||+|.. .+..++..++++ |+++.+|..... ..+.. ..++.+++++.|+....+. ....
T Consensus 258 ~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~------~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~ 329 (378)
T PLN02827 258 RMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK------PEVSAHYGLFLSGRTLKGSLFGGWK--PKSD 329 (378)
T ss_pred HHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC------ccccccHHHHhcCceEEeeecCCCc--hhhh
Confidence 77766899999999976 788999999998 999999875421 11222 3567789999988765431 1335
Q ss_pred HHHHHHHHHCCCccc--eeeeecchhhHHHHHHHHHhhh
Q 041355 141 LELVIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 141 ~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+.++++++.+|++++ +++++|+|+++++|++.++++.
T Consensus 330 ~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~ 368 (378)
T PLN02827 330 LPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGK 368 (378)
T ss_pred HHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCC
Confidence 778999999999998 7899999999999999998753
No 20
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=99.88 E-value=4.1e-21 Score=145.33 Aligned_cols=159 Identities=18% Similarity=0.175 Sum_probs=124.4
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++||+++ +.....+|++|+|+| +|++|++++|+||.+|+ +|+++++++++ +++++.+ +.+
T Consensus 156 ~~a~~al-~~~~~~~g~~VlV~G-~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~-~~~- 231 (343)
T PRK09880 156 AVAIHAA-HQAGDLQGKRVFVSG-VGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDH-YKA- 231 (343)
T ss_pred HHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHH-Hhc-
Confidence 5788888 445667899999998 59999999999999999 68888887665 1122222 222
Q ss_pred cCCCccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHH
Q 041355 66 FPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELV 144 (180)
Q Consensus 66 ~~~~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (180)
..+++|++|||+|+. .+..++++++++|+++.+|.... ...+++..++.+++++.++... .+.++++
T Consensus 232 ~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g~~~~------~~~~~~~ 299 (343)
T PRK09880 232 EKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------PPEFPMMTLIVKEISLKGSFRF------TEEFNTA 299 (343)
T ss_pred cCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHHhCCcEEEEEeec------cccHHHH
Confidence 123699999999975 78899999999999999986432 2345566777889998887642 2357889
Q ss_pred HHHHHCCCccc--eeeeecchhhHHHHHHHHHhh
Q 041355 145 IPAIREGKMVY--VEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 145 ~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~ 176 (180)
++++.+|++++ +++++|+++++++|++.++++
T Consensus 300 ~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~ 333 (343)
T PRK09880 300 VSWLANGVINPLPLLSAEYPFTDLEEALIFAGDK 333 (343)
T ss_pred HHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcC
Confidence 99999999986 678999999999999988765
No 21
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=99.88 E-value=7.2e-21 Score=143.72 Aligned_cols=161 Identities=18% Similarity=0.129 Sum_probs=128.1
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~-vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++||+++ +..++++|++|+|+| +|++|++++|+||.+|++ |+++++++++ ++++ .+.+.+.
T Consensus 150 ~ta~~~l-~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~-~~~~~~~ 226 (339)
T cd08239 150 GTAYHAL-RRVGVSGRDTVLVVG-AGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD-VQEIREL 226 (339)
T ss_pred HHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch-HHHHHHH
Confidence 5789998 567889999999998 699999999999999997 9988877554 2223 5566666
Q ss_pred cCC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
+++ ++|++|||+|+. .+...+++++++|+++.+|..... ... ....++.+++++.+++... .+.+.+
T Consensus 227 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~-~~~~~~~~~~~i~g~~~~~-----~~~~~~ 295 (339)
T cd08239 227 TSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-----TIE-VSNDLIRKQRTLIGSWYFS-----VPDMEE 295 (339)
T ss_pred hCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-----ccC-cHHHHHhCCCEEEEEecCC-----HHHHHH
Confidence 766 899999999987 557889999999999999875421 111 1235677889999887644 345788
Q ss_pred HHHHHHCCCccc--eeeeecchhhHHHHHHHHHhh
Q 041355 144 VIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 144 ~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~ 176 (180)
+++++.+|.+++ +++++|+++++++|++.++++
T Consensus 296 ~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~ 330 (339)
T cd08239 296 CAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQG 330 (339)
T ss_pred HHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcC
Confidence 999999999874 788999999999999988775
No 22
>PLN02740 Alcohol dehydrogenase-like
Probab=99.87 E-value=1.1e-20 Score=144.82 Aligned_cols=167 Identities=19% Similarity=0.144 Sum_probs=129.1
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------Cc--chHHHHHH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EE--PDLDAALK 63 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~--~~~~~~~~ 63 (180)
++||+++.+..++++|++|+|+| +|++|++++|+||.+|+ +|+++++++++ .+ +++.+.++
T Consensus 184 ~ta~~~~~~~~~~~~g~~VlV~G-~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~ 262 (381)
T PLN02740 184 STGVGAAWNTANVQAGSSVAIFG-LGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIR 262 (381)
T ss_pred hhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEecccccchHHHHHH
Confidence 57888887788999999999999 69999999999999999 69988887665 11 23566677
Q ss_pred hHcCCCccEEEeCCChh-hHHHHHHhhccC-CEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHH
Q 041355 64 RWFPQGIDIYFENVGGK-MLDAVLLNMRLR-GRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFL 141 (180)
Q Consensus 64 ~~~~~~~d~~~d~~g~~-~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (180)
+.+++++|++|||+|+. .+..++.+++++ |+++.+|..... ....+....+ .+++++.|+....+.. ...+
T Consensus 263 ~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~----~~~~~~~~~~-~~~~~i~g~~~~~~~~--~~~~ 335 (381)
T PLN02740 263 EMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTP----KMLPLHPMEL-FDGRSITGSVFGDFKG--KSQL 335 (381)
T ss_pred HHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCC----ceecccHHHH-hcCCeEEEEecCCCCc--HHHH
Confidence 77666899999999975 788899999996 999999875421 1122232223 3678888876644321 2457
Q ss_pred HHHHHHHHCCCccc--eeeeecchhhHHHHHHHHHhh
Q 041355 142 ELVIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 142 ~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~ 176 (180)
.++++++.++.+++ +++++|+++++++|++.++++
T Consensus 336 ~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~ 372 (381)
T PLN02740 336 PNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDG 372 (381)
T ss_pred HHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCC
Confidence 88999999998865 688999999999999988775
No 23
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=99.87 E-value=5.7e-21 Score=144.74 Aligned_cols=169 Identities=14% Similarity=0.114 Sum_probs=126.7
Q ss_pred hHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 3 IVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 3 ~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~-vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++|+++ +...+++|++|+|+| +|++|++++|+||.+|++ |+++++++++ +..+ .+.+.+.+
T Consensus 148 ~~~~~~-~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~-~~~~~~~~ 224 (347)
T PRK10309 148 VGLHAF-HLAQGCEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMS-APQIQSVL 224 (347)
T ss_pred HHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccC-HHHHHHHh
Confidence 456665 667889999999997 699999999999999996 6777776544 1112 34566666
Q ss_pred CC-Ccc-EEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 67 PQ-GID-IYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 67 ~~-~~d-~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
.+ ++| ++|||+|+. .+..++++++++|+++.+|..... ......+...++.+++++.|+.........++.+++
T Consensus 225 ~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~---~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 301 (347)
T PRK10309 225 RELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD---LHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWET 301 (347)
T ss_pred cCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC---cccChhhhhHHhhcCcEEEEEeccccCCcchhHHHH
Confidence 65 888 999999976 888999999999999999875421 111112234567788999987653211112356788
Q ss_pred HHHHHHCCCcc--ceeeeecchhhHHHHHHHHHhhh
Q 041355 144 VIPAIREGKMV--YVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 144 ~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++++.+|.++ ++++++|+|+++++|++.++++.
T Consensus 302 ~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~ 337 (347)
T PRK10309 302 ASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNP 337 (347)
T ss_pred HHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCC
Confidence 99999999984 67899999999999999988764
No 24
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=99.87 E-value=1e-20 Score=143.20 Aligned_cols=168 Identities=21% Similarity=0.202 Sum_probs=135.4
Q ss_pred CchHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------Ccc-hHHHHHH
Q 041355 1 MLIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EEP-DLDAALK 63 (180)
Q Consensus 1 ~l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~~-~~~~~~~ 63 (180)
|.+++++........++++++|+| +|++|++++|++|.+|+ +|++++.++++ ..+ +....+.
T Consensus 153 la~~~~~~a~~~~~~~~~~V~V~G-aGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~ 231 (350)
T COG1063 153 LATAYHGHAERAAVRPGGTVVVVG-AGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEIL 231 (350)
T ss_pred hhhhhhhhhhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHH
Confidence 346777755556666667999999 99999999999999998 78888887776 112 4566777
Q ss_pred hHcCC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHH
Q 041355 64 RWFPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFL 141 (180)
Q Consensus 64 ~~~~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (180)
+.+++ ++|++|||+|.. .+..++.+++++|+++.+|..... ....+...++.+++++.|..... ....+
T Consensus 232 ~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~-----~~~~~~~~~~~kel~l~gs~~~~----~~~~~ 302 (350)
T COG1063 232 ELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGE-----DIPLPAGLVVSKELTLRGSLRPS----GREDF 302 (350)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCc-----cCccCHHHHHhcccEEEeccCCC----CcccH
Confidence 88888 999999999976 789999999999999999987642 11456778999999999984422 13457
Q ss_pred HHHHHHHHCCCccc--eeeeecchhhHHHHHHHHHhhhc
Q 041355 142 ELVIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWRVK 178 (180)
Q Consensus 142 ~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~~~ 178 (180)
+.+++++.+|++.+ ++++.++++++++|++.+.++.+
T Consensus 303 ~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~ 341 (350)
T COG1063 303 ERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKE 341 (350)
T ss_pred HHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCC
Confidence 88999999999987 56899999999999999988653
No 25
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=99.87 E-value=2.7e-20 Score=139.54 Aligned_cols=169 Identities=20% Similarity=0.259 Sum_probs=135.8
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++||+++ +..++++|++++|+|++|++|++++|+|+.+|++++++++++++ .+.++...+++.+
T Consensus 126 ~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~ 204 (324)
T cd08292 126 LSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAA 204 (324)
T ss_pred HHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHh
Confidence 4677877 55889999999999999999999999999999999988877643 3345667788888
Q ss_pred CC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch-----HHHHHHH
Q 041355 67 PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-----YHLYLKF 140 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 140 (180)
++ ++|++|||+|+.....++++++++|+++.+|.... .....++...+.+++++.++....+ +......
T Consensus 205 ~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (324)
T cd08292 205 GGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSMSG-----EPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRM 279 (324)
T ss_pred CCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEecCCC-----CCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHH
Confidence 77 89999999998888889999999999999986421 1223455556778899988876432 2234567
Q ss_pred HHHHHHHHHCCCccceeeeecchhhHHHHHHHHHhh
Q 041355 141 LELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 141 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
+..+++++.+|.+++.+.++|+++++.+|++.++++
T Consensus 280 ~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~ 315 (324)
T cd08292 280 IAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRP 315 (324)
T ss_pred HHHHHHHHHCCCccCccccEecHHHHHHHHHHHHcC
Confidence 888999999999987667889999999999988764
No 26
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=99.87 E-value=1.9e-20 Score=141.99 Aligned_cols=162 Identities=21% Similarity=0.217 Sum_probs=126.7
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------Cc---chHHHHHH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EE---PDLDAALK 63 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~---~~~~~~~~ 63 (180)
+++|+++. ...+++|++|+|+|+ |++|++++|+|+.+|++|+++++++++ .+ +++.+.++
T Consensus 153 ~ta~~a~~-~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~ 230 (349)
T TIGR03201 153 TTPYQAAV-QAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIK 230 (349)
T ss_pred HHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHH
Confidence 56788874 578899999999996 999999999999999999988877654 11 24566677
Q ss_pred hHcCC-Ccc----EEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHH
Q 041355 64 RWFPQ-GID----IYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLY 137 (180)
Q Consensus 64 ~~~~~-~~d----~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (180)
+.+++ ++| .+|||+|+. .+..++++++++|+++.+|..... ..+++..++.++.++.+.+...
T Consensus 231 ~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~~~g~~~~~----- 299 (349)
T TIGR03201 231 AFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK------TEYRLSNLMAFHARALGNWGCP----- 299 (349)
T ss_pred hhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC------cccCHHHHhhcccEEEEEecCC-----
Confidence 77776 776 899999976 677889999999999999875421 2344455666677777766433
Q ss_pred HHHHHHHHHHHHCCCccc--eeeeecchhhHHHHHHHHHhhh
Q 041355 138 LKFLELVIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 138 ~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
...+..+++++++|++++ +++ +|||+++++|++.++++.
T Consensus 300 ~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~ 340 (349)
T TIGR03201 300 PDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHK 340 (349)
T ss_pred HHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCC
Confidence 345788999999999975 454 689999999999988764
No 27
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=99.87 E-value=3.2e-20 Score=141.29 Aligned_cols=161 Identities=15% Similarity=0.117 Sum_probs=124.6
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------------CcchHHHHHHhHcC
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------------EEPDLDAALKRWFP 67 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------------~~~~~~~~~~~~~~ 67 (180)
+++|+++.+...+++|++|+|.| +|++|++++|+||.+|++|++++.++++ +..+ .+.+++.++
T Consensus 169 ~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~-~~~~~~~~~ 246 (360)
T PLN02586 169 ITVYSPMKYYGMTEPGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTD-PEKMKAAIG 246 (360)
T ss_pred HHHHHHHHHhcccCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCC-HHHHHhhcC
Confidence 56788886666778999999987 6999999999999999998887776543 0111 123444443
Q ss_pred CCccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHHH
Q 041355 68 QGIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIP 146 (180)
Q Consensus 68 ~~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (180)
++|++|||+|.. .+..++++++++|+++.+|.... ...+++..++.++..+.++.... ...++++++
T Consensus 247 -~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~ 314 (360)
T PLN02586 247 -TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK------PLELPIFPLVLGRKLVGGSDIGG-----IKETQEMLD 314 (360)
T ss_pred -CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC------CCccCHHHHHhCCeEEEEcCcCC-----HHHHHHHHH
Confidence 699999999975 78889999999999999986431 12345556677777777776543 245788999
Q ss_pred HHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 147 AIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
++.+|++++.+ ++|+|+++++|++.++++.
T Consensus 315 li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~ 344 (360)
T PLN02586 315 FCAKHNITADI-ELIRMDEINTAMERLAKSD 344 (360)
T ss_pred HHHhCCCCCcE-EEEeHHHHHHHHHHHHcCC
Confidence 99999999876 5799999999999998774
No 28
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=99.87 E-value=2.4e-20 Score=142.39 Aligned_cols=167 Identities=17% Similarity=0.120 Sum_probs=125.3
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------C--cchHHHHHH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------E--EPDLDAALK 63 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~--~~~~~~~~~ 63 (180)
++||+++.+..++++|++|+|+| +|++|++++|+||.+|+ +|+++++++++ . ++++.+.++
T Consensus 171 ~ta~~a~~~~~~~~~g~~VlV~G-~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~ 249 (368)
T TIGR02818 171 TTGIGAVLNTAKVEEGDTVAVFG-LGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIV 249 (368)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccccchhHHHHHH
Confidence 57888887888999999999998 69999999999999999 79988877654 1 123456677
Q ss_pred hHcCCCccEEEeCCChh-hHHHHHHhhccC-CEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHH
Q 041355 64 RWFPQGIDIYFENVGGK-MLDAVLLNMRLR-GRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFL 141 (180)
Q Consensus 64 ~~~~~~~d~~~d~~g~~-~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (180)
+.+++++|++|||+|+. .+..++.+++++ |+++.+|..... .....+...++. +..+.+...... ..+..+
T Consensus 250 ~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~~~~~~-~~~~~g~~~~~~--~~~~~~ 322 (368)
T TIGR02818 250 EITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG----QEISTRPFQLVT-GRVWRGSAFGGV--KGRTEL 322 (368)
T ss_pred HHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCC----CcccccHHHHhc-cceEEEeeccCC--CcHHHH
Confidence 77766899999999965 788899999886 999999875321 111222333333 334556544321 113457
Q ss_pred HHHHHHHHCCCcc--ceeeeecchhhHHHHHHHHHhh
Q 041355 142 ELVIPAIREGKMV--YVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 142 ~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
.++++++.+|.++ ++++++|+|+++++|++.++++
T Consensus 323 ~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~ 359 (368)
T TIGR02818 323 PGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEG 359 (368)
T ss_pred HHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCC
Confidence 8899999999885 4689999999999999998765
No 29
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=99.87 E-value=3.2e-20 Score=141.69 Aligned_cols=167 Identities=20% Similarity=0.177 Sum_probs=127.0
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------Cc--chHHHHHH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EE--PDLDAALK 63 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~--~~~~~~~~ 63 (180)
++||+++.+..++++|++|+|+| +|++|++++|+||.+|+ +|+++++++++ .+ +++.+.++
T Consensus 172 ~ta~~a~~~~~~~~~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~ 250 (368)
T cd08300 172 TTGYGAVLNTAKVEPGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLV 250 (368)
T ss_pred hhhHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccccchHHHHHHH
Confidence 57888887888899999999998 69999999999999999 79998887655 11 24666777
Q ss_pred hHcCCCccEEEeCCChh-hHHHHHHhhccC-CEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHH
Q 041355 64 RWFPQGIDIYFENVGGK-MLDAVLLNMRLR-GRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFL 141 (180)
Q Consensus 64 ~~~~~~~d~~~d~~g~~-~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (180)
+.+++++|++|||+|+. .+..++.+++++ |+++.+|..... .........+. ....+.++....+. .+..+
T Consensus 251 ~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~----~~~~~~~~~~~-~~~~~~g~~~~~~~--~~~~~ 323 (368)
T cd08300 251 EMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG----QEISTRPFQLV-TGRVWKGTAFGGWK--SRSQV 323 (368)
T ss_pred HHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC----CccccCHHHHh-hcCeEEEEEecccC--cHHHH
Confidence 77777899999999975 888899999886 999999875321 11122222233 23455565543321 23457
Q ss_pred HHHHHHHHCCCccc--eeeeecchhhHHHHHHHHHhh
Q 041355 142 ELVIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 142 ~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~ 176 (180)
.++++++.+|.+++ +++++|+|+++++|++.++++
T Consensus 324 ~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~ 360 (368)
T cd08300 324 PKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAG 360 (368)
T ss_pred HHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCC
Confidence 78899999999985 588999999999999998765
No 30
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=99.87 E-value=3.5e-20 Score=141.55 Aligned_cols=168 Identities=17% Similarity=0.133 Sum_probs=130.0
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------Cc--chHHHHHH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EE--PDLDAALK 63 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~--~~~~~~~~ 63 (180)
++||+++.+..++++|++|+|+| +|++|++++|+||.+|+ +|+++++++++ .+ +++.+.++
T Consensus 173 ~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~ 251 (369)
T cd08301 173 STGLGAAWNVAKVKKGSTVAIFG-LGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIA 251 (369)
T ss_pred hHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccccchhHHHHHH
Confidence 46788877778899999999998 69999999999999999 79999887665 11 23555667
Q ss_pred hHcCCCccEEEeCCChh-hHHHHHHhhccC-CEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHH
Q 041355 64 RWFPQGIDIYFENVGGK-MLDAVLLNMRLR-GRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFL 141 (180)
Q Consensus 64 ~~~~~~~d~~~d~~g~~-~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (180)
+.+++++|++|||+|.. .+...+.+++++ |+++.+|..... ....++...++ +++++.++....+. .+..+
T Consensus 252 ~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~----~~~~~~~~~~~-~~~~i~g~~~~~~~--~~~~~ 324 (369)
T cd08301 252 EMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD----AVFSTHPMNLL-NGRTLKGTLFGGYK--PKTDL 324 (369)
T ss_pred HHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC----cccccCHHHHh-cCCeEEEEecCCCC--hHHHH
Confidence 76666899999999976 678889999996 999999876431 11223333333 67899888765431 23457
Q ss_pred HHHHHHHHCCCccc--eeeeecchhhHHHHHHHHHhhh
Q 041355 142 ELVIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 142 ~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++++++.++.++. +++++||++++++|++.++++.
T Consensus 325 ~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~ 362 (369)
T cd08301 325 PNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGE 362 (369)
T ss_pred HHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCC
Confidence 88999999998764 6789999999999999988763
No 31
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=99.86 E-value=3.8e-20 Score=141.13 Aligned_cols=166 Identities=19% Similarity=0.158 Sum_probs=127.2
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------Cc--chHHHHHH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EE--PDLDAALK 63 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~--~~~~~~~~ 63 (180)
++||+++.+..++++|++|+|+| +|++|++++|+||.+|+ +|+++++++++ .+ .++.+.++
T Consensus 170 ~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~ 248 (365)
T cd08277 170 STGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSEVIR 248 (365)
T ss_pred HHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccccchHHHHHH
Confidence 57888887888999999999997 69999999999999999 79888887654 11 23455666
Q ss_pred hHcCCCccEEEeCCChh-hHHHHHHhhccC-CEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHH
Q 041355 64 RWFPQGIDIYFENVGGK-MLDAVLLNMRLR-GRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFL 141 (180)
Q Consensus 64 ~~~~~~~d~~~d~~g~~-~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (180)
+.+++++|++|||+|+. .+...+.+++++ |+++.+|...+. ..+.++..++. +.++.++....+. .+..+
T Consensus 249 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-----~~~~~~~~~~~-~~~i~g~~~~~~~--~~~~~ 320 (365)
T cd08277 249 EMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGA-----ELSIRPFQLIL-GRTWKGSFFGGFK--SRSDV 320 (365)
T ss_pred HHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCcc-----ccccCHhHHhh-CCEEEeeecCCCC--hHHHH
Confidence 66666899999999964 778899999875 999999875421 11233334443 6788887765431 12356
Q ss_pred HHHHHHHHCCCcc--ceeeeecchhhHHHHHHHHHhh
Q 041355 142 ELVIPAIREGKMV--YVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 142 ~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
.++++++.++.++ ++++++|+++++++|++.++++
T Consensus 321 ~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~ 357 (365)
T cd08277 321 PKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSG 357 (365)
T ss_pred HHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCC
Confidence 7889999988755 6789999999999999988776
No 32
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=99.86 E-value=3.6e-20 Score=131.75 Aligned_cols=167 Identities=19% Similarity=0.187 Sum_probs=134.8
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-----------------CcchHHH-HHH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-----------------EEPDLDA-ALK 63 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-----------------~~~~~~~-~~~ 63 (180)
+|||..|.+..++++||+|.-.||.++||++.+|+||++|++.+.++|+... .++++.. ..+
T Consensus 146 ~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~ 225 (354)
T KOG0025|consen 146 CTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMK 225 (354)
T ss_pred hHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhh
Confidence 5899999999999999999999999999999999999999988888887654 1111111 111
Q ss_pred hH-cCC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch------HH
Q 041355 64 RW-FPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY------YH 135 (180)
Q Consensus 64 ~~-~~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 135 (180)
+. ... ++.++|+|+|+.....+.+.|..+|+++++|... ..+.......++++++.++|+++..| ++
T Consensus 226 k~~~~~~~prLalNcVGGksa~~iar~L~~GgtmvTYGGMS-----kqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe 300 (354)
T KOG0025|consen 226 KFKGDNPRPRLALNCVGGKSATEIARYLERGGTMVTYGGMS-----KQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPE 300 (354)
T ss_pred hhhccCCCceEEEeccCchhHHHHHHHHhcCceEEEecCcc-----CCCcccccchheeccceeeeeeeeehhhccCCcH
Confidence 11 123 7899999999998889999999999999998866 33445556678899999999999877 34
Q ss_pred HHHHHHHHHHHHHHCCCccceeeeecchhhHHHHHHHH
Q 041355 136 LYLKFLELVIPAIREGKMVYVEDIAEGLEKISRNCYTL 173 (180)
Q Consensus 136 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l 173 (180)
...+.+.++.+++..|+|+.......+|++...|++..
T Consensus 301 ~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~ 338 (354)
T KOG0025|consen 301 ERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAA 338 (354)
T ss_pred HHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHH
Confidence 44578899999999999998877778999888887753
No 33
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=99.86 E-value=1.1e-19 Score=138.81 Aligned_cols=161 Identities=16% Similarity=0.137 Sum_probs=124.7
Q ss_pred chHHHHHHHHcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCS-PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~-~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------------~~~~~~~~~~~~~ 66 (180)
+++|+++..... .++|++|+|.| +|++|++++|+||.+|++|+++++++++ +..+ .+.+.+.+
T Consensus 163 ~ta~~al~~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~-~~~v~~~~ 240 (375)
T PLN02178 163 ITVYSPMKYYGMTKESGKRLGVNG-LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTD-SQKMKEAV 240 (375)
T ss_pred hHHHHHHHHhCCCCCCCCEEEEEc-ccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcC-HHHHHHhh
Confidence 467888754433 36899999998 6999999999999999999988876432 1111 13444444
Q ss_pred CCCccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHH
Q 041355 67 PQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVI 145 (180)
Q Consensus 67 ~~~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (180)
+ ++|++|||+|.. .+..++++++++|+++.+|.... ...+++..++.+++++.|+.... .+.+.+++
T Consensus 241 ~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~ 308 (375)
T PLN02178 241 G-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK------PLDLPIFPLVLGRKMVGGSQIGG-----MKETQEML 308 (375)
T ss_pred C-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC------CCccCHHHHHhCCeEEEEeCccC-----HHHHHHHH
Confidence 3 699999999977 78899999999999999986531 12345667778888998877644 24578889
Q ss_pred HHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 146 PAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++.+|++++.+ ++|||+++++|++.++++.
T Consensus 309 ~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~ 339 (375)
T PLN02178 309 EFCAKHKIVSDI-ELIKMSDINSAMDRLAKSD 339 (375)
T ss_pred HHHHhCCCcccE-EEEeHHHHHHHHHHHHcCC
Confidence 999999999877 5799999999999998764
No 34
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=99.86 E-value=6.3e-20 Score=139.24 Aligned_cols=163 Identities=23% Similarity=0.239 Sum_probs=133.1
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++||+++ ...++++|++|+|+| +|++|++++|+|+.+|+ +|+++++++++ .+.++.+.+++.
T Consensus 159 ~ta~~~l-~~~~~~~g~~vlI~g-~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l~~~ 236 (351)
T cd08233 159 AVAWHAV-RRSGFKPGDTALVLG-AGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVRKL 236 (351)
T ss_pred HHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHHHHH
Confidence 4688988 778899999999998 69999999999999999 78888776544 334577778887
Q ss_pred cCC-CccEEEeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
+++ ++|+++||+|. ..+..++++++++|+++.+|.... ...+++..++.+++++.+..... .+.+++
T Consensus 237 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~ 305 (351)
T cd08233 237 TGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK------PISFNPNDLVLKEKTLTGSICYT-----REDFEE 305 (351)
T ss_pred hCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC------CCccCHHHHHhhCcEEEEEeccC-----cchHHH
Confidence 776 79999999985 488899999999999999987541 22455667778889998886543 356788
Q ss_pred HHHHHHCCCcc--ceeeeecchhhH-HHHHHHHHhhh
Q 041355 144 VIPAIREGKMV--YVEDIAEGLEKI-SRNCYTLKWRV 177 (180)
Q Consensus 144 ~~~~~~~g~~~--~~~~~~~~~~~~-~~a~~~l~~~~ 177 (180)
+.+++++|.++ +.++++|+++++ ++|++.++++.
T Consensus 306 ~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~ 342 (351)
T cd08233 306 VIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDK 342 (351)
T ss_pred HHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCC
Confidence 99999999995 467889999996 79999888775
No 35
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.85 E-value=5.5e-20 Score=132.70 Aligned_cols=160 Identities=18% Similarity=0.189 Sum_probs=133.2
Q ss_pred hHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-----------------CcchHHHHHHhH
Q 041355 3 IVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-----------------EEPDLDAALKRW 65 (180)
Q Consensus 3 ~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-----------------~~~~~~~~~~~~ 65 (180)
|+|..| ...++.||+++.|.|+. ++|.+++|+||++|.+|+++.+++.+ ++++..+.+.+.
T Consensus 169 TvYspL-k~~g~~pG~~vgI~GlG-GLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~ 246 (360)
T KOG0023|consen 169 TVYSPL-KRSGLGPGKWVGIVGLG-GLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKT 246 (360)
T ss_pred EEeehh-HHcCCCCCcEEEEecCc-ccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHh
Confidence 567778 67788899999999954 49999999999999999999999743 467788888888
Q ss_pred cCCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHH
Q 041355 66 FPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVI 145 (180)
Q Consensus 66 ~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (180)
+++.+|-+... ....+..++.+++++|+++.+|.+.. ...+....+..+.+++.|+.... +...++++
T Consensus 247 ~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~~lil~~~~I~GS~vG~-----~ket~E~L 314 (360)
T KOG0023|consen 247 TDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTFPLILGRKSIKGSIVGS-----RKETQEAL 314 (360)
T ss_pred hcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC------cccccchhhhcccEEEEeecccc-----HHHHHHHH
Confidence 76666665544 33388899999999999999998763 34556677888999999999987 45678899
Q ss_pred HHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 146 PAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
++..++.+++.+ +..+++++++||++|+++.
T Consensus 315 df~a~~~ik~~I-E~v~~~~v~~a~erm~kgd 345 (360)
T KOG0023|consen 315 DFVARGLIKSPI-ELVKLSEVNEAYERMEKGD 345 (360)
T ss_pred HHHHcCCCcCce-EEEehhHHHHHHHHHHhcC
Confidence 999999999988 6689999999999999873
No 36
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.85 E-value=1.6e-19 Score=135.68 Aligned_cols=176 Identities=46% Similarity=0.672 Sum_probs=135.8
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC----------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~----------------~~~~~~~~~~~~ 65 (180)
++||+++.+...+.+|++|+|+|++|++|++++|++|..|++|+++++++++ .+.++.+.+.+.
T Consensus 131 ~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~ 210 (329)
T cd05288 131 LTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEA 210 (329)
T ss_pred HHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHh
Confidence 5788888777889999999999999999999999999999999998876532 223455666666
Q ss_pred cCCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHH
Q 041355 66 FPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVI 145 (180)
Q Consensus 66 ~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (180)
+++++|+++||+|+..+..++++++++|+++.++..............+....+.+++++.+...........+.+.++.
T Consensus 211 ~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (329)
T cd05288 211 APDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELA 290 (329)
T ss_pred ccCCceEEEEcchHHHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHH
Confidence 65689999999998888999999999999999986543211000001234556778888888776443333356788899
Q ss_pred HHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 146 PAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++.++.+++....++++++++++++.++++.
T Consensus 291 ~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~ 322 (329)
T cd05288 291 KWLAEGKLKYREDVVEGLENAPEAFLGLFTGK 322 (329)
T ss_pred HHHHCCCccccccccccHHHHHHHHHHHhcCC
Confidence 99999999887666789999999999887653
No 37
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.85 E-value=4.8e-20 Score=137.60 Aligned_cols=161 Identities=12% Similarity=0.081 Sum_probs=116.4
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-CCC-C-cchH-HHHHHhHcCCCccEEEeCC
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS-KEK-E-EPDL-DAALKRWFPQGIDIYFENV 77 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~-~~~-~-~~~~-~~~~~~~~~~~~d~~~d~~ 77 (180)
.+||+++.+ . ..++++++|+| +|++|++++|+||.+|++++++.+. +++ . .... .-...+..+.++|++|||+
T Consensus 132 ~~a~~~~~~-~-~~~~~~vlV~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~~~i~~~~~~~~g~Dvvid~~ 208 (308)
T TIGR01202 132 ATARHAVAG-A-EVKVLPDLIVG-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGYEVLDPEKDPRRDYRAIYDAS 208 (308)
T ss_pred HHHHHHHHh-c-ccCCCcEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhccccChhhccCCCCCEEEECC
Confidence 578888844 3 34688999998 7999999999999999975544433 222 0 0000 0000111223799999999
Q ss_pred Chh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHHHHHHCCCccc-
Q 041355 78 GGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIPAIREGKMVY- 155 (180)
Q Consensus 78 g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~- 155 (180)
|++ .+..++++++++|+++.+|.... ...+++...+.+++++.+..... .+.++++++++.+|.+++
T Consensus 209 G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~l~~~g~i~~~ 277 (308)
T TIGR01202 209 GDPSLIDTLVRRLAKGGEIVLAGFYTE------PVNFDFVPAFMKEARLRIAAEWQ-----PGDLHAVRELIESGALSLD 277 (308)
T ss_pred CCHHHHHHHHHhhhcCcEEEEEeecCC------CcccccchhhhcceEEEEecccc-----hhHHHHHHHHHHcCCCChh
Confidence 986 68999999999999999987532 12344456677888888765433 356888999999999976
Q ss_pred -eeeeecchhhHHHHHHHHHhh
Q 041355 156 -VEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 156 -~~~~~~~~~~~~~a~~~l~~~ 176 (180)
+++++|||+++++|++.+.++
T Consensus 278 ~~it~~~~l~~~~~A~~~~~~~ 299 (308)
T TIGR01202 278 GLITHQRPASDAAEAYMTAFSD 299 (308)
T ss_pred hccceeecHHHHHHHHHHHhcC
Confidence 688999999999999977654
No 38
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=99.85 E-value=1.4e-19 Score=137.68 Aligned_cols=161 Identities=17% Similarity=0.148 Sum_probs=126.0
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------------CcchHHHHHHhHcC
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------------EEPDLDAALKRWFP 67 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------------~~~~~~~~~~~~~~ 67 (180)
++||+++.+....++|++++|+| +|++|++++|+||.+|++|+++++++++ ...+ ...+.+.+
T Consensus 166 ~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~-~~~~~~~~- 242 (357)
T PLN02514 166 VTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSD-AAEMQEAA- 242 (357)
T ss_pred HHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCC-hHHHHHhc-
Confidence 56788886656668999999997 7999999999999999998888876543 0001 12233333
Q ss_pred CCccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHHH
Q 041355 68 QGIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIP 146 (180)
Q Consensus 68 ~~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (180)
+++|++|||+|.. .+..++++++++|+++.+|.... ...++...++.++.++.++.... ...+.++++
T Consensus 243 ~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~ 311 (357)
T PLN02514 243 DSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT------PLQFVTPMLMLGRKVITGSFIGS-----MKETEEMLE 311 (357)
T ss_pred CCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC------CCcccHHHHhhCCcEEEEEecCC-----HHHHHHHHH
Confidence 3699999999964 88899999999999999987532 12355567778889999887654 235778899
Q ss_pred HHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 147 AIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 147 ~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
++.+|.+++.+ ++|+++++++|++.++++.
T Consensus 312 ~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~ 341 (357)
T PLN02514 312 FCKEKGLTSMI-EVVKMDYVNTAFERLEKND 341 (357)
T ss_pred HHHhCCCcCcE-EEEcHHHHHHHHHHHHcCC
Confidence 99999998877 5799999999999998764
No 39
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=99.85 E-value=1.2e-19 Score=136.57 Aligned_cols=161 Identities=16% Similarity=0.050 Sum_probs=122.2
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHH--------HhHcCCCccEE
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAAL--------KRWFPQGIDIY 73 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~--------~~~~~~~~d~~ 73 (180)
++||+++ +..++++|++|+|+|+ |++|++++|+||.+|++|+++++++++ .++...+ .+...+++|.+
T Consensus 152 ~ta~~~~-~~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~--~~~a~~~Ga~~vi~~~~~~~~~~d~~ 227 (329)
T TIGR02822 152 IIGYRAL-LRASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAA--RRLALALGAASAGGAYDTPPEPLDAA 227 (329)
T ss_pred hHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHH--HHHHHHhCCceeccccccCcccceEE
Confidence 5789998 4688999999999995 999999999999999999998887664 0111000 01112368988
Q ss_pred EeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHHHHHHCCC
Q 041355 74 FENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIPAIREGK 152 (180)
Q Consensus 74 ~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 152 (180)
+++.+.. .+...+++++++|+++.+|..... ...+++..++.+++++.++.... +..+.++++++++|+
T Consensus 228 i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~ 297 (329)
T TIGR02822 228 ILFAPAGGLVPPALEALDRGGVLAVAGIHLTD-----TPPLNYQRHLFYERQIRSVTSNT-----RADAREFLELAAQHG 297 (329)
T ss_pred EECCCcHHHHHHHHHhhCCCcEEEEEeccCcc-----CCCCCHHHHhhCCcEEEEeecCC-----HHHHHHHHHHHHhCC
Confidence 8887644 888999999999999999874321 12345556677888888876543 334677889999999
Q ss_pred ccceeeeecchhhHHHHHHHHHhhh
Q 041355 153 MVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 153 ~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++ ++++|+|+++++|++.++++.
T Consensus 298 i~~-i~~~~~l~~~~~A~~~~~~~~ 321 (329)
T TIGR02822 298 VRV-TTHTYPLSEADRALRDLKAGR 321 (329)
T ss_pred Cee-EEEEEeHHHHHHHHHHHHcCC
Confidence 975 578999999999999998774
No 40
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.84 E-value=5.1e-19 Score=132.54 Aligned_cols=171 Identities=20% Similarity=0.210 Sum_probs=136.0
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++||+++.+...+.+|++++|+|++|++|++++|+|+.+|++++++++++++ ...++...+.+.+
T Consensus 124 ~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 203 (323)
T cd05282 124 LTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEAT 203 (323)
T ss_pred HHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHh
Confidence 5678888788888999999999999999999999999999999998887654 2234556677777
Q ss_pred CC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch-----HHHHHHH
Q 041355 67 PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-----YHLYLKF 140 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 140 (180)
.+ ++|+++||+|+......+++++++|+++.++..... ....+...+..+++++.+.....+ +....+.
T Consensus 204 ~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (323)
T cd05282 204 GGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGE-----PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQET 278 (323)
T ss_pred cCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCC-----CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHH
Confidence 66 899999999988777889999999999999765431 123344444447888888776442 2344567
Q ss_pred HHHHHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 141 LELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 141 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+.++.+++.++.+.+.+.++++++++++|++.++++.
T Consensus 279 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~ 315 (323)
T cd05282 279 FAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPG 315 (323)
T ss_pred HHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCC
Confidence 8889999999999887778899999999999888653
No 41
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.84 E-value=5.4e-19 Score=132.46 Aligned_cols=170 Identities=23% Similarity=0.273 Sum_probs=134.6
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++| +++.+..+++++++++|+|++|++|++++|+|+.+|++|+++++++++ .+.++.+.+.+..
T Consensus 129 ~ta-~~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 207 (324)
T cd08244 129 RTA-LGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREAL 207 (324)
T ss_pred HHH-HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHc
Confidence 456 445577889999999999999999999999999999999999877543 2345666677777
Q ss_pred CC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch-HHHHHHHHHHH
Q 041355 67 PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYLKFLELV 144 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 144 (180)
++ ++|+++||+|+.....++++++++|+++.++..... ...++....+.+++++.+...... +....+.+.++
T Consensus 208 ~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (324)
T cd08244 208 GGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWASGE-----WTALDEDDARRRGVTVVGLLGVQAERGGLRALEARA 282 (324)
T ss_pred CCCCceEEEECCChHhHHHHHHHhccCcEEEEEecCCCC-----CCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHH
Confidence 66 899999999988888899999999999999875421 113344456778888887765432 23345678888
Q ss_pred HHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 145 IPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 145 ~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
.+++.++.+.+.+..+++++++++|++.++++.
T Consensus 283 ~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~ 315 (324)
T cd08244 283 LAEAAAGRLVPVVGQTFPLERAAEAHAALEARS 315 (324)
T ss_pred HHHHHCCCccCccceEEeHHHHHHHHHHHHcCC
Confidence 999999999888778899999999999888653
No 42
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.84 E-value=8.5e-19 Score=132.45 Aligned_cols=171 Identities=23% Similarity=0.147 Sum_probs=133.6
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC----C---------------Ccc---hHH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE----K---------------EEP---DLD 59 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~----~---------------~~~---~~~ 59 (180)
++||+++.+...+++|++|+|+|++|++|++++|+|+.+|+++++++++++ + ... ++.
T Consensus 132 ~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 211 (341)
T cd08290 132 CTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLAT 211 (341)
T ss_pred HHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHH
Confidence 578888877788999999999999999999999999999999999888752 1 111 455
Q ss_pred HHHHhHcCCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch-----H
Q 041355 60 AALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-----Y 134 (180)
Q Consensus 60 ~~~~~~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 134 (180)
..++...++++|++|||+|+..+...+++++++|+++.++..... ....+....+.+++++.+...... +
T Consensus 212 ~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (341)
T cd08290 212 ELLKSAPGGRPKLALNCVGGKSATELARLLSPGGTMVTYGGMSGQ-----PVTVPTSLLIFKDITLRGFWLTRWLKRANP 286 (341)
T ss_pred HHHHHHcCCCceEEEECcCcHhHHHHHHHhCCCCEEEEEeccCCC-----CcccCHHHHhhCCceEEEEecHHHHhhcCH
Confidence 556665555799999999988888889999999999999754321 123344456788899888876432 2
Q ss_pred HHHHHHHHHHHHHHHCCCccceeeeec---chhhHHHHHHHHHhhh
Q 041355 135 HLYLKFLELVIPAIREGKMVYVEDIAE---GLEKISRNCYTLKWRV 177 (180)
Q Consensus 135 ~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~a~~~l~~~~ 177 (180)
......+..+++++.++.+.+....++ +++++++|++.++++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~ 332 (341)
T cd08290 287 EEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGG 332 (341)
T ss_pred HHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcC
Confidence 233456888999999999998766677 9999999999987653
No 43
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.84 E-value=6e-19 Score=133.68 Aligned_cols=163 Identities=25% Similarity=0.299 Sum_probs=128.4
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-------------CcchHHHHHHhHcCC
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-------------EEPDLDAALKRWFPQ 68 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-------------~~~~~~~~~~~~~~~ 68 (180)
++||+++ ...++++|++++|+|++|++|++++|+|+.+|++++++++++.. ........ ...+.+
T Consensus 164 ~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~ 241 (350)
T cd08274 164 STAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAAKEEAVRALGADTVILRDAPLLAD-AKALGG 241 (350)
T ss_pred HHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCchhhHHHHhcCCeEEEeCCCccHHH-HHhhCC
Confidence 4678887 77889999999999988999999999999999999988876521 11111222 344444
Q ss_pred -CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHHHH
Q 041355 69 -GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIPA 147 (180)
Q Consensus 69 -~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (180)
++|++|||+|++.+...+++++++|+++.++.... .....++..++.++.++.+..... .+.+.++.++
T Consensus 242 ~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l 311 (350)
T cd08274 242 EPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAG-----PVVELDLRTLYLKDLTLFGSTLGT-----REVFRRLVRY 311 (350)
T ss_pred CCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCC-----ccccCCHHHhhhcceEEEEeecCC-----HHHHHHHHHH
Confidence 89999999998888999999999999999976421 112445556677888888877643 3567888999
Q ss_pred HHCCCccceeeeecchhhHHHHHHHHHhh
Q 041355 148 IREGKMVYVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 148 ~~~g~~~~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
+.++.+++.+.++++++++++|++.+.++
T Consensus 312 ~~~~~l~~~~~~~~~~~~~~~a~~~~~~~ 340 (350)
T cd08274 312 IEEGEIRPVVAKTFPLSEIREAQAEFLEK 340 (350)
T ss_pred HHCCCcccccccccCHHHHHHHHHHHhcC
Confidence 99999998878899999999999988765
No 44
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=99.83 E-value=3.9e-19 Score=135.36 Aligned_cols=166 Identities=19% Similarity=0.163 Sum_probs=124.9
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------Ccc---hHHHHH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EEP---DLDAAL 62 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~~---~~~~~~ 62 (180)
++||+++.+....++|++|||+| +|++|++++|+||.+|+ +|+++++++++ +.. ++...+
T Consensus 163 ~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i 241 (361)
T cd08231 163 ATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIV 241 (361)
T ss_pred HHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHH
Confidence 57899997766677999999997 79999999999999999 99988876553 111 122457
Q ss_pred HhHcCC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHH
Q 041355 63 KRWFPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKF 140 (180)
Q Consensus 63 ~~~~~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (180)
++.+++ ++|++|||+|+. .+...+++++++|+++.+|.... .....++...++.+++++.++.... .+.
T Consensus 242 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 312 (361)
T cd08231 242 RDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAP----AGTVPLDPERIVRKNLTIIGVHNYD-----PSH 312 (361)
T ss_pred HHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCC----CCccccCHHHHhhcccEEEEcccCC-----chh
Confidence 777766 899999999864 78889999999999999986532 1112334445677888888876533 223
Q ss_pred HHHHHHHHHCC----CccceeeeecchhhHHHHHHHHHhhh
Q 041355 141 LELVIPAIREG----KMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 141 ~~~~~~~~~~g----~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
++++++++.++ .+.++++++|+++++++|++.++++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~ 353 (361)
T cd08231 313 LYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGT 353 (361)
T ss_pred HHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCC
Confidence 55566666665 45567789999999999999887753
No 45
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=99.83 E-value=4.8e-19 Score=136.99 Aligned_cols=157 Identities=16% Similarity=0.126 Sum_probs=122.7
Q ss_pred HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC---EEEEEeCCCCC------------------------Cc-chHHHH
Q 041355 10 LVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC---YVVGSAGSKEK------------------------EE-PDLDAA 61 (180)
Q Consensus 10 ~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~---~vi~~~~~~~~------------------------~~-~~~~~~ 61 (180)
+..++++|++|+|+|++|++|++++|+||.+|+ +|+++++++++ .+ +++.+.
T Consensus 169 ~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~ 248 (410)
T cd08238 169 HRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHAT 248 (410)
T ss_pred hhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHH
Confidence 456789999999999999999999999999864 78888776543 01 245556
Q ss_pred HHhHcCC-CccEEEeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHH
Q 041355 62 LKRWFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLK 139 (180)
Q Consensus 62 ~~~~~~~-~~d~~~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (180)
+++.+++ ++|+++||+|. ..+..++++++++|+++.++..... .....+++..++.+++++.|+.... ..
T Consensus 249 v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~---~~~~~~~~~~~~~~~~~i~g~~~~~-----~~ 320 (410)
T cd08238 249 LMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDK---NFSAPLNFYNVHYNNTHYVGTSGGN-----TD 320 (410)
T ss_pred HHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCC---CccccccHHHhhhcCcEEEEeCCCC-----HH
Confidence 7777776 89999999985 4888999999999988876542211 1112455667788899999876543 34
Q ss_pred HHHHHHHHHHCCCccc--eeeeecchhhHHHHHHHHH
Q 041355 140 FLELVIPAIREGKMVY--VEDIAEGLEKISRNCYTLK 174 (180)
Q Consensus 140 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~ 174 (180)
.++++++++.+|++++ +++++|||+++++|++.+.
T Consensus 321 ~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~ 357 (410)
T cd08238 321 DMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP 357 (410)
T ss_pred HHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh
Confidence 5778999999999988 7899999999999999988
No 46
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=99.83 E-value=8.4e-19 Score=134.75 Aligned_cols=168 Identities=14% Similarity=0.148 Sum_probs=120.5
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS-AGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~-~~~~~~---------------~~~~~~~~~~~~ 65 (180)
+++|+++ +..++++|++|+|.| +|++|++++|+||.+|++++++ ++++++ .++++.+.+.+.
T Consensus 172 ~ta~~a~-~~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~~~~~~~v~~~ 249 (393)
T TIGR02819 172 PTGYHGA-VTAGVGPGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKDATLPEQIEQI 249 (393)
T ss_pred HHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEEecCCcccHHHHHHHH
Confidence 4678887 457899999999966 8999999999999999975544 444322 123456667777
Q ss_pred cCC-CccEEEeCCChh---------------hHHHHHHhhccCCEEEEEeccccccCCC-------CccccchHHHhhcC
Q 041355 66 FPQ-GIDIYFENVGGK---------------MLDAVLLNMRLRGRIAVSSIISQYNLEK-------PEGVHNLEQLIGKR 122 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~~---------------~~~~~~~~l~~~G~~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 122 (180)
+++ ++|++|||+|.+ .+..++++++++|+++.+|......... ....+.......++
T Consensus 250 ~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 329 (393)
T TIGR02819 250 LGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKS 329 (393)
T ss_pred cCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccccccccccchHHhhccC
Confidence 776 899999999974 7899999999999999999863211000 01122233444555
Q ss_pred cEEEeeeccchHHHHHHHHHHHHHHHHCCCccc--eee-eecchhhHHHHHHHHHhh
Q 041355 123 IRLEGFLAGDYYHLYLKFLELVIPAIREGKMVY--VED-IAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~-~~~~~~~~~~a~~~l~~~ 176 (180)
+++.+.... ..+++.++++++.+|++++ +++ ++|||+++++||+.+.++
T Consensus 330 ~~i~g~~~~-----~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~ 381 (393)
T TIGR02819 330 HSFHTGQTP-----VMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAG 381 (393)
T ss_pred ceEEeccCC-----hhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhC
Confidence 666652211 1234567899999999875 566 789999999999998765
No 47
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.83 E-value=2.4e-19 Score=132.12 Aligned_cols=154 Identities=18% Similarity=0.202 Sum_probs=115.4
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCCCC-------------CcchHHHHHHhHcC
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK-------------EEPDLDAALKRWFP 67 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~-vi~~~~~~~~-------------~~~~~~~~~~~~~~ 67 (180)
+++|+++ +.....+|++|+|+| +|++|++++|+||.+|++ |+++++++++ +..+..+.+++.+.
T Consensus 107 ~ta~~al-~~~~~~~g~~VlV~G-~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~ 184 (280)
T TIGR03366 107 ATVMAAL-EAAGDLKGRRVLVVG-AGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEVLAERQGGLQN 184 (280)
T ss_pred HHHHHHH-HhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchhhHHHHHHHhC
Confidence 4677887 445567999999998 699999999999999995 8887666554 11222344556666
Q ss_pred C-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHH
Q 041355 68 Q-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVI 145 (180)
Q Consensus 68 ~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (180)
+ ++|++|||+|.. .+..++++++++|+++.+|..... ....+++..++.+++++.++.... .+.+++++
T Consensus 185 ~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~i~~~~~~~~~~~i~g~~~~~-----~~~~~~~~ 255 (280)
T TIGR03366 185 GRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPG----GPVALDPEQVVRRWLTIRGVHNYE-----PRHLDQAV 255 (280)
T ss_pred CCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCC----CceeeCHHHHHhCCcEEEecCCCC-----HHHHHHHH
Confidence 5 899999999866 788999999999999999865321 123456677888999999877543 34577888
Q ss_pred HHHHCC--Cc--cceeeeecchhhH
Q 041355 146 PAIREG--KM--VYVEDIAEGLEKI 166 (180)
Q Consensus 146 ~~~~~g--~~--~~~~~~~~~~~~~ 166 (180)
+++.++ .+ +++++++||++++
T Consensus 256 ~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 256 RFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred HHHHhhCCCCCHHHHhhcccccccC
Confidence 888874 43 3578899999863
No 48
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.83 E-value=1e-18 Score=130.53 Aligned_cols=169 Identities=17% Similarity=0.202 Sum_probs=129.3
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------------CcchHHHHHHhHcC
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------------EEPDLDAALKRWFP 67 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------------~~~~~~~~~~~~~~ 67 (180)
++||+++.+..++++|++|+|+|++|++|++++|+|+..|++|+++++++++ ...++.+.+++. +
T Consensus 128 ~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~-~ 206 (320)
T cd08243 128 YTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVIDDGAIAEQLRAA-P 206 (320)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEecCccHHHHHHHh-C
Confidence 5788888887889999999999999999999999999999999998887643 223455566666 4
Q ss_pred CCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHH--HhhcCcEEEeeeccchHHHHHHHHHHHH
Q 041355 68 QGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQ--LIGKRIRLEGFLAGDYYHLYLKFLELVI 145 (180)
Q Consensus 68 ~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (180)
+++|+++||+|+..+...+++++++|+++.+|....... ........ .+.+++++.++..... ....++.+.
T Consensus 207 ~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 280 (320)
T cd08243 207 GGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLGGQWT---LEDFNPMDDIPSGVNLTLTGSSSGDV---PQTPLQELF 280 (320)
T ss_pred CCceEEEECCChHHHHHHHHHhccCCEEEEEccCCCCcc---cCCcchhhhhhhccceEEEecchhhh---hHHHHHHHH
Confidence 589999999998888999999999999999986532210 11111111 2355666666654321 234678889
Q ss_pred HHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 146 PAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++.++.+++...++++++++++|++.++++.
T Consensus 281 ~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~ 312 (320)
T cd08243 281 DFVAAGHLDIPPSKVFTFDEIVEAHAYMESNR 312 (320)
T ss_pred HHHHCCceecccccEEcHHHHHHHHHHHHhCC
Confidence 99999999887778899999999999987653
No 49
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=99.83 E-value=4e-19 Score=134.41 Aligned_cols=161 Identities=16% Similarity=0.117 Sum_probs=115.2
Q ss_pred chHHHHHHHH--cCCCCCCEEEEecCCchHHHHHHHHHHH-cCC-EEEEEeCCCCC----CcchHHHHHHhHcCC-CccE
Q 041355 2 LIVGNLIILV--CSPKKGEYVYVSAASGAVGQLVGQFAKL-AGC-YVVGSAGSKEK----EEPDLDAALKRWFPQ-GIDI 72 (180)
Q Consensus 2 l~a~~~l~~~--~~~~~g~~vlI~Ga~g~vG~~~iqlak~-~g~-~vi~~~~~~~~----~~~~~~~~~~~~~~~-~~d~ 72 (180)
.++|+++.+. ..+++|++|+|.| +|++|++++|+++. +|+ +|+++++++++ ...+....+.+...+ ++|+
T Consensus 147 ~~a~~a~~~~~~~~~~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~~~~~~~g~d~ 225 (341)
T cd08237 147 SVGVHAISRFEQIAHKDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLIDDIPEDLAVDH 225 (341)
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehhhhhhccCCcE
Confidence 4678887543 3568999999999 69999999999986 664 89988887665 110000011122233 7999
Q ss_pred EEeCCCh---h-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHHHHH
Q 041355 73 YFENVGG---K-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIPAI 148 (180)
Q Consensus 73 ~~d~~g~---~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (180)
+|||+|+ + .+..++++++++|+++.+|.... ...++...++.+++++.++.... .+.++++++++
T Consensus 226 viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~~~ 294 (341)
T cd08237 226 AFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------PVPINTRMVLEKGLTLVGSSRST-----REDFERAVELL 294 (341)
T ss_pred EEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------CcccCHHHHhhCceEEEEecccC-----HHHHHHHHHHH
Confidence 9999994 2 68889999999999999986431 12345566788999999876533 24577889999
Q ss_pred HCC-----Cccceeeeecchhh---HHHHHHHHH
Q 041355 149 REG-----KMVYVEDIAEGLEK---ISRNCYTLK 174 (180)
Q Consensus 149 ~~g-----~~~~~~~~~~~~~~---~~~a~~~l~ 174 (180)
.++ .++++++++|++++ +.++++.+.
T Consensus 295 ~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~ 328 (341)
T cd08237 295 SRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDL 328 (341)
T ss_pred HhCCcccCChHHHhccccccccHHHHHHHHHHHh
Confidence 988 57788899999854 555555443
No 50
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=99.82 E-value=1.4e-18 Score=133.75 Aligned_cols=165 Identities=17% Similarity=0.176 Sum_probs=128.9
Q ss_pred chHHHHHHHH--cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-------------C--cc--------
Q 041355 2 LIVGNLIILV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-------------E--EP-------- 56 (180)
Q Consensus 2 l~a~~~l~~~--~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-------------~--~~-------- 56 (180)
++||+++... .++++|++++|+|+.|++|++++|+||.+|++++++++++++ + +.
T Consensus 177 ~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~ 256 (393)
T cd08246 177 ATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPD 256 (393)
T ss_pred HHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEccccccccccccc
Confidence 5788888654 678999999999988999999999999999998888776543 0 00
Q ss_pred --------------hHHHHHHhHcCC--CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhh
Q 041355 57 --------------DLDAALKRWFPQ--GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIG 120 (180)
Q Consensus 57 --------------~~~~~~~~~~~~--~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~ 120 (180)
.+.+.+.+.+++ ++|+++||+|+..+...+++++++|+++.++..... ....+...+..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~l~~ 331 (393)
T cd08246 257 VNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGY-----NHTYDNRYLWM 331 (393)
T ss_pred ccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCC-----CCCCcHHHHhh
Confidence 134556666665 799999999988888899999999999999764321 12234455666
Q ss_pred cCcEEEeeeccchHHHHHHHHHHHHHHHHCCCccceeeeecchhhHHHHHHHHHhh
Q 041355 121 KRIRLEGFLAGDYYHLYLKFLELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
++.++.+..... .+.+..+++++.++.+.+.++++++++++++|++.++++
T Consensus 332 ~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~ 382 (393)
T cd08246 332 RQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRN 382 (393)
T ss_pred heeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhC
Confidence 777777766543 235677889999999998888899999999999998866
No 51
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=99.82 E-value=8e-19 Score=133.42 Aligned_cols=151 Identities=14% Similarity=0.111 Sum_probs=111.3
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC---CC--------------CcchHHHHHHhHcCCCccEEEe
Q 041355 13 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK---EK--------------EEPDLDAALKRWFPQGIDIYFE 75 (180)
Q Consensus 13 ~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~---~~--------------~~~~~~~~~~~~~~~~~d~~~d 75 (180)
++++|++|+|+| +|++|++++|+||.+|++|+++++++ ++ .++++.+ . . ..+++|++||
T Consensus 169 ~~~~g~~vlI~G-~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~-~-~-~~~~~d~vid 244 (355)
T cd08230 169 PTWNPRRALVLG-AGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAE-V-K-LVGEFDLIIE 244 (355)
T ss_pred ccCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhh-h-h-hcCCCCEEEE
Confidence 367899999998 69999999999999999999988742 22 1122221 1 1 1247999999
Q ss_pred CCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccc----hHHHhhcCcEEEeeeccchHHHHHHHHHHHHHHHHC
Q 041355 76 NVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHN----LEQLIGKRIRLEGFLAGDYYHLYLKFLELVIPAIRE 150 (180)
Q Consensus 76 ~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (180)
|+|.. .+..++++++++|+++.+|...+. ....++ ...++.+++++.|+.... .+.++++++++.+
T Consensus 245 ~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~----~~~~~~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~~l~~ 315 (355)
T cd08230 245 ATGVPPLAFEALPALAPNGVVILFGVPGGG----REFEVDGGELNRDLVLGNKALVGSVNAN-----KRHFEQAVEDLAQ 315 (355)
T ss_pred CcCCHHHHHHHHHHccCCcEEEEEecCCCC----CccccChhhhhhhHhhcCcEEEEecCCc-----hhhHHHHHHHHHh
Confidence 99976 788899999999999999876531 111222 245677889998876543 2335667777766
Q ss_pred CC------ccceeeeecchhhHHHHHHHHHhh
Q 041355 151 GK------MVYVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 151 g~------~~~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
+. ++++++++|+++++++|++.++++
T Consensus 316 ~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~ 347 (355)
T cd08230 316 WKYRWPGVLERLITRRVPLEEFAEALTEKPDG 347 (355)
T ss_pred cccccccchHHheeeeecHHHHHHHHHhcccC
Confidence 55 677889999999999999987654
No 52
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.82 E-value=4.9e-18 Score=126.52 Aligned_cols=170 Identities=25% Similarity=0.278 Sum_probs=132.8
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
+++|+++.+..++++|++++|+|++|++|++++++++.+|++|+++++++++ ...++...++..+
T Consensus 122 ~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 201 (320)
T cd05286 122 LTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREIT 201 (320)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHc
Confidence 4678888788899999999999999999999999999999999998876543 2234556677777
Q ss_pred CC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch---HHHHHHHHH
Q 041355 67 PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY---YHLYLKFLE 142 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 142 (180)
.+ ++|++++|+++.....++++++++|+++.++..... ...+++..+..+++++.+...... +......+.
T Consensus 202 ~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (320)
T cd05286 202 GGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNASGP-----VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAA 276 (320)
T ss_pred CCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCCCC-----CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHH
Confidence 65 899999999988888899999999999999864421 122344444467777766543222 333456778
Q ss_pred HHHHHHHCCCccceeeeecchhhHHHHHHHHHhh
Q 041355 143 LVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 143 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
++.+++.++.+.+...+.+++++++++++.+..+
T Consensus 277 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~ 310 (320)
T cd05286 277 ELFDAVASGKLKVEIGKRYPLADAAQAHRDLESR 310 (320)
T ss_pred HHHHHHHCCCCcCcccceEcHHHHHHHHHHHHcC
Confidence 8899999999988777889999999999988765
No 53
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.82 E-value=4.3e-18 Score=127.98 Aligned_cols=174 Identities=34% Similarity=0.530 Sum_probs=132.4
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++||+++.+..++++|++++|+|++|++|++++|+++..|++|+++++++++ ...++...+....
T Consensus 125 ~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~ 204 (329)
T cd08250 125 LTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEY 204 (329)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhc
Confidence 5789999888889999999999999999999999999999999998877543 2223444555444
Q ss_pred CCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCC-----CccccchHHHhhcCcEEEeeeccchHHHHHHHH
Q 041355 67 PQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEK-----PEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFL 141 (180)
Q Consensus 67 ~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (180)
++++|+++||+|+..+...+++++++|+++.++......... ...... ...+.+++++.+...........+.+
T Consensus 205 ~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (329)
T cd08250 205 PKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAKLIPQHL 283 (329)
T ss_pred CCCCeEEEECCcHHHHHHHHHHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHHHHHHHH
Confidence 458999999999888889999999999999998654321000 001112 34567788888887654333345678
Q ss_pred HHHHHHHHCCCccce--eeeecchhhHHHHHHHHHhh
Q 041355 142 ELVIPAIREGKMVYV--EDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 142 ~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~l~~~ 176 (180)
.++.+++.++.+.+. ..++++++++++|++.++++
T Consensus 284 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~ 320 (329)
T cd08250 284 DRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSG 320 (329)
T ss_pred HHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcC
Confidence 889999999999874 34568999999999988865
No 54
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.81 E-value=3.4e-18 Score=127.49 Aligned_cols=169 Identities=19% Similarity=0.165 Sum_probs=130.8
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~-vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
+++|+++. ..++++|++++|+| +|++|++++|+|+.+|++ |+++++++++ ...++...+++.
T Consensus 116 ~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~ 193 (312)
T cd08269 116 GCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVREL 193 (312)
T ss_pred HHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHH
Confidence 46777774 78899999999997 799999999999999998 8888876543 234566777777
Q ss_pred cCC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
+++ ++|+++||+|+. .....+++++++|+++.++.... .....++.....+++.+.++..... ....+.+++
T Consensus 194 ~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 267 (312)
T cd08269 194 TGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQD-----GPRPVPFQTWNWKGIDLINAVERDP-RIGLEGMRE 267 (312)
T ss_pred cCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-----CCcccCHHHHhhcCCEEEEecccCc-cchhhHHHH
Confidence 776 899999999865 77888999999999999986531 1123344456677777766553321 223467888
Q ss_pred HHHHHHCCCccc--eeeeecchhhHHHHHHHHHhhhc
Q 041355 144 VIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWRVK 178 (180)
Q Consensus 144 ~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~~~ 178 (180)
+.++++++.+.+ .+.++++++++++|++.++++..
T Consensus 268 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~ 304 (312)
T cd08269 268 AVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPD 304 (312)
T ss_pred HHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCC
Confidence 999999999987 35688999999999999988754
No 55
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.81 E-value=2.7e-18 Score=130.35 Aligned_cols=166 Identities=16% Similarity=0.097 Sum_probs=123.1
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++||+++ +..++++|++|+|+| +|++|++++|+||.+|+ .|+++++++++ .+.++.+.+++.
T Consensus 153 ~ta~~~~-~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~ 230 (351)
T cd08285 153 STGFHGA-ELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKL 230 (351)
T ss_pred hhHHHHH-HccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHH
Confidence 5788885 778899999999997 79999999999999999 57888776543 234566677777
Q ss_pred cCC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccc--hHHHhhcCcEEEeeeccchHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHN--LEQLIGKRIRLEGFLAGDYYHLYLKFL 141 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (180)
+.+ ++|+++||+|+. .+..++++++++|+++.++..... .....+ ......+..++.+..... ..+.+
T Consensus 231 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~ 302 (351)
T cd08285 231 TGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGED----DYLPIPREEWGVGMGHKTINGGLCPG----GRLRM 302 (351)
T ss_pred hCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC----ceeecChhhhhhhccccEEEEeecCC----ccccH
Confidence 665 899999999975 788999999999999999865421 011111 111223344554433221 13567
Q ss_pred HHHHHHHHCCCccc---eeeeecchhhHHHHHHHHHhhh
Q 041355 142 ELVIPAIREGKMVY---VEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 142 ~~~~~~~~~g~~~~---~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++++++++|++++ .+.++++++++++|++.++++.
T Consensus 303 ~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~ 341 (351)
T cd08285 303 ERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKP 341 (351)
T ss_pred HHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhccc
Confidence 88999999999988 3446799999999999988864
No 56
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.81 E-value=8e-18 Score=126.60 Aligned_cols=171 Identities=22% Similarity=0.278 Sum_probs=131.6
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------Ccch-HHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPD-LDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~-~~~~~~~~ 65 (180)
++||+++.+..++++|++++|+|++|++|++++|+|+..|++++++.+++++ ...+ +...+++.
T Consensus 126 ~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 205 (334)
T PTZ00354 126 LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKL 205 (334)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHH
Confidence 5788888787899999999999999999999999999999987777776543 1222 56667777
Q ss_pred cCC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch-----HHHHHH
Q 041355 66 FPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-----YHLYLK 139 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 139 (180)
+++ ++|+++||+|++.+...+++++++|+++.++..... ....++...+..+..++.+...... +.....
T Consensus 206 ~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (334)
T PTZ00354 206 TGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGGA----KVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVAS 281 (334)
T ss_pred hCCCCceEEEECCchHHHHHHHHHhccCCeEEEEecCCCC----cccccCHHHHHhhCCEEEeeeccccchhhhHHHHHH
Confidence 765 899999999988889999999999999999854321 1111444555666667777654431 112234
Q ss_pred HHHHHHHHHHCCCccceeeeecchhhHHHHHHHHHhh
Q 041355 140 FLELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 140 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
.++.+.+++.++.+.+.+.+.+++++++++++.++.+
T Consensus 282 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 318 (334)
T PTZ00354 282 FEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQN 318 (334)
T ss_pred HHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhC
Confidence 5677889999999998877889999999999988765
No 57
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=99.80 E-value=1.3e-17 Score=128.64 Aligned_cols=166 Identities=17% Similarity=0.185 Sum_probs=126.8
Q ss_pred chHHHHHHH--HcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------Cc---------
Q 041355 2 LIVGNLIIL--VCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EE--------- 55 (180)
Q Consensus 2 l~a~~~l~~--~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~--------- 55 (180)
++||+++.. ..++++|++++|+|++|++|++++|+++.+|++++++++++++ ++
T Consensus 173 ~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~ 252 (398)
T TIGR01751 173 ATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPD 252 (398)
T ss_pred HHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEEecCCCcchhhcccc
Confidence 567888754 4678999999999988999999999999999998887766443 00
Q ss_pred -------------chHHHHHHhHcCC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhc
Q 041355 56 -------------PDLDAALKRWFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGK 121 (180)
Q Consensus 56 -------------~~~~~~~~~~~~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (180)
..+...+.+.+++ ++|++|||+|...+...+.+++++|+++.+|..... ....+...+..+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~ 327 (398)
T TIGR01751 253 LNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGY-----NHDYDNRYLWMR 327 (398)
T ss_pred ccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCC-----CCCcCHHHHhhc
Confidence 0133455666665 899999999988888899999999999999875432 122334455556
Q ss_pred CcEEEeeeccchHHHHHHHHHHHHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 122 RIRLEGFLAGDYYHLYLKFLELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+.++.+...... +.++++.+++.++.+.+.+++++++++++++++.+.++.
T Consensus 328 ~~~~~~~~~~~~-----~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~ 378 (398)
T TIGR01751 328 QKRIQGSHFANL-----REAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNH 378 (398)
T ss_pred ccEEEccccCcH-----HHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCC
Confidence 666666654432 235678899999999988889999999999999887653
No 58
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=99.80 E-value=1.2e-17 Score=127.42 Aligned_cols=168 Identities=21% Similarity=0.301 Sum_probs=128.5
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++|++++.+...+++|++|+|+| +|++|++++|+|+.+|+ .++++++++++ .++++.+.+++.
T Consensus 172 ~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~~~~~~~~v~~~ 250 (365)
T cd08278 172 QTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKEEDLVAAIREI 250 (365)
T ss_pred hhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHH
Confidence 56788887888899999999997 69999999999999999 57777766543 233566677777
Q ss_pred cCCCccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHH
Q 041355 66 FPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELV 144 (180)
Q Consensus 66 ~~~~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (180)
++.++|+++||+|.. .+..++++++++|+++.+|..... +....++..++.++.++.++..... ...+.+.++
T Consensus 251 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 324 (365)
T cd08278 251 TGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPG----AEVTLDVNDLLVSGKTIRGVIEGDS--VPQEFIPRL 324 (365)
T ss_pred hCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCC----CccccCHHHHhhcCceEEEeecCCc--ChHHHHHHH
Confidence 744899999999864 788999999999999999865321 1224455555578888887765332 124567888
Q ss_pred HHHHHCCCccc-eeeeecchhhHHHHHHHHHhh
Q 041355 145 IPAIREGKMVY-VEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 145 ~~~~~~g~~~~-~~~~~~~~~~~~~a~~~l~~~ 176 (180)
++++.++.+.+ .+..+++++++++|++.++++
T Consensus 325 ~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~ 357 (365)
T cd08278 325 IELYRQGKFPFDKLVTFYPFEDINQAIADSESG 357 (365)
T ss_pred HHHHHcCCCChHHheEEecHHHHHHHHHHHHCC
Confidence 99999999864 234579999999999988765
No 59
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.79 E-value=2.3e-17 Score=123.98 Aligned_cols=169 Identities=24% Similarity=0.240 Sum_probs=125.8
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++||+++.+..++++|++++|+|+.|++|++++|++|.+|++|+++++++++ +..++.+.+++.+
T Consensus 126 ~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 205 (327)
T PRK10754 126 LTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEIT 205 (327)
T ss_pred HHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHc
Confidence 4678888777889999999999999999999999999999999988876543 3345667778877
Q ss_pred CC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCc------EEEeeeccchHHHHHH
Q 041355 67 PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRI------RLEGFLAGDYYHLYLK 139 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 139 (180)
++ ++|+++||+|+......+.+++++|+++.++..... ....+...+..++. ++.++. ........
T Consensus 206 ~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 278 (327)
T PRK10754 206 GGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNASGP-----VTGVNLGILNQKGSLYVTRPSLQGYI--TTREELTE 278 (327)
T ss_pred CCCCeEEEEECCcHHHHHHHHHHhccCCEEEEEccCCCC-----CCCcCHHHHhccCceEEecceeeccc--CCHHHHHH
Confidence 76 899999999988888899999999999999865421 11122222222221 111111 11223445
Q ss_pred HHHHHHHHHHCCCccce--eeeecchhhHHHHHHHHHhhh
Q 041355 140 FLELVIPAIREGKMVYV--EDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 140 ~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~l~~~~ 177 (180)
.+.++.+++.+|.+++. ..+++++++++++++.++++.
T Consensus 279 ~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~ 318 (327)
T PRK10754 279 ASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRA 318 (327)
T ss_pred HHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCC
Confidence 67778999999999863 468899999999999887653
No 60
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=99.79 E-value=1.9e-17 Score=124.84 Aligned_cols=160 Identities=19% Similarity=0.187 Sum_probs=125.7
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++||+++.. .++++|++|+|+| +|++|++++|+||.+|++|+++++++++ ...++.+.+++.
T Consensus 150 ~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~- 226 (333)
T cd08296 150 VTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQEL- 226 (333)
T ss_pred HHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhc-
Confidence 567888844 5899999999999 8999999999999999999999887643 223444455544
Q ss_pred CCCccEEEeCCC-hhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHH
Q 041355 67 PQGIDIYFENVG-GKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVI 145 (180)
Q Consensus 67 ~~~~d~~~d~~g-~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (180)
+++|+++||+| ...+...+++++++|+++.++.... ...++...++.+++++.+..... ...+..+.
T Consensus 227 -~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~ 294 (333)
T cd08296 227 -GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE------PVAVSPLQLIMGRKSIHGWPSGT-----ALDSEDTL 294 (333)
T ss_pred -CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC------CCCcCHHHHhhcccEEEEeCcCC-----HHHHHHHH
Confidence 36999999987 4588889999999999999987541 22344556678899999887543 23566778
Q ss_pred HHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 146 PAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++.++.+++.+ .+++++++.+|++.++++.
T Consensus 295 ~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~ 325 (333)
T cd08296 295 KFSALHGVRPMV-ETFPLEKANEAYDRMMSGK 325 (333)
T ss_pred HHHHhCCCCceE-EEEEHHHHHHHHHHHHCCC
Confidence 888999998876 5799999999999888653
No 61
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.79 E-value=2.1e-17 Score=124.57 Aligned_cols=163 Identities=27% Similarity=0.307 Sum_probs=124.5
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC------------CcchHHHHHHhHcCCC
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK------------EEPDLDAALKRWFPQG 69 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~------------~~~~~~~~~~~~~~~~ 69 (180)
++||+++.+. .++++++++|+|++|++|++++|+++..|++|+++++++++ ...++.+.+++. ++
T Consensus 149 ~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~ 225 (334)
T PRK13771 149 GMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKYADYVIVGSKFSEEVKKI--GG 225 (334)
T ss_pred HHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCchhHHHHHHhc--CC
Confidence 5678888665 89999999999999999999999999999999988887644 011222333332 36
Q ss_pred ccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHHHHHH
Q 041355 70 IDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIPAIR 149 (180)
Q Consensus 70 ~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (180)
+|+++||+|+..+..++++++++|+++.+|..... ..........+.+++++.+.... .++.++.+.+++.
T Consensus 226 ~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 296 (334)
T PRK13771 226 ADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPS----PTYSLRLGYIILKDIEIIGHISA-----TKRDVEEALKLVA 296 (334)
T ss_pred CcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCC----CCcccCHHHHHhcccEEEEecCC-----CHHHHHHHHHHHH
Confidence 99999999988888999999999999999875421 11012233345677777776422 2456888999999
Q ss_pred CCCccceeeeecchhhHHHHHHHHHhh
Q 041355 150 EGKMVYVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 150 ~g~~~~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
++.+++.+.++++++++++|++.++++
T Consensus 297 ~~~l~~~~~~~~~~~~~~~a~~~~~~~ 323 (334)
T PRK13771 297 EGKIKPVIGAEVSLSEIDKALEELKDK 323 (334)
T ss_pred cCCCcceEeeeEcHHHHHHHHHHHHcC
Confidence 999998888899999999999988765
No 62
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.79 E-value=2.3e-17 Score=123.81 Aligned_cols=171 Identities=18% Similarity=0.187 Sum_probs=118.4
Q ss_pred chHHHHHHHHc--C-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-------------Ccch-HHHHHHh
Q 041355 2 LIVGNLIILVC--S-PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-------------EEPD-LDAALKR 64 (180)
Q Consensus 2 l~a~~~l~~~~--~-~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-------------~~~~-~~~~~~~ 64 (180)
++||+++.... . ...+++|+|+|++|++|++++|+|+.+|++|+++++++++ +..+ ..+.+.+
T Consensus 129 ~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 208 (326)
T cd08289 129 FTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKP 208 (326)
T ss_pred HHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHh
Confidence 35677664332 3 3457899999999999999999999999999999887654 1111 2334444
Q ss_pred HcCCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch-HHHHHHHHHH
Q 041355 65 WFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYLKFLEL 143 (180)
Q Consensus 65 ~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 143 (180)
..++++|.++||+|+..+...+++++++|+++.+|..... ....++..++.+++++.+...... .......+..
T Consensus 209 ~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (326)
T cd08289 209 LEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGGG-----EVETTVFPFILRGVNLLGIDSVECPMELRRRIWRR 283 (326)
T ss_pred hccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEeecCCC-----CCCcchhhhhhccceEEEEEeEecCchHHHHHHHH
Confidence 4444899999999988889999999999999999875321 112234455578888888754221 1122334444
Q ss_pred HHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 144 VIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 144 ~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+.+.+....+.+.+.++++++++++|++.++++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~ 317 (326)
T cd08289 284 LATDLKPTQLLNEIKQEITLDELPEALKQILQGR 317 (326)
T ss_pred HHhhcCccccccccceEeeHHHHHHHHHHHhcCc
Confidence 4444433334445678899999999999987663
No 63
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.79 E-value=3.4e-17 Score=123.77 Aligned_cols=164 Identities=20% Similarity=0.169 Sum_probs=128.4
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++||+++.. .+++++++++|+|+++++|++++|+|+.+|++|+++++++++ ...++...+.+.+
T Consensus 152 ~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~ 230 (341)
T cd08297 152 VTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELT 230 (341)
T ss_pred HHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHh
Confidence 578888855 589999999999988889999999999999999999887643 2235666777777
Q ss_pred CC-CccEEEeCCC-hhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHH
Q 041355 67 PQ-GIDIYFENVG-GKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELV 144 (180)
Q Consensus 67 ~~-~~d~~~d~~g-~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (180)
++ ++|+++||.+ ......++++++++|+++.++.... .....+......++.++.+..... .+.++++
T Consensus 231 ~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 300 (341)
T cd08297 231 GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPG-----GFIPLDPFDLVLRGITIVGSLVGT-----RQDLQEA 300 (341)
T ss_pred cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCC-----CCCCCCHHHHHhcccEEEEeccCC-----HHHHHHH
Confidence 65 8999999776 4588889999999999999985432 112344455567788877754432 3567888
Q ss_pred HHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 145 IPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 145 ~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
.+++.++.+++.+ ..+++++++++++.++.+.
T Consensus 301 ~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~ 332 (341)
T cd08297 301 LEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGK 332 (341)
T ss_pred HHHHHcCCCccee-EEEcHHHHHHHHHHHHcCC
Confidence 9999999998755 5689999999999888653
No 64
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=99.79 E-value=2.4e-17 Score=125.92 Aligned_cols=167 Identities=21% Similarity=0.213 Sum_probs=129.4
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~-vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++||+++.+...+.+|++++|+| +|++|++++|+|+.+|++ |+++++++++ +..++...+++.
T Consensus 173 ~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~ 251 (367)
T cd08263 173 FTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIREI 251 (367)
T ss_pred HHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecCCcccHHHHHHHH
Confidence 67899988878889999999996 899999999999999997 8888766543 233556667776
Q ss_pred cCC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
.++ ++|+++||+++. ....++++++++|+++.++..... .....+...++.+++++.++.... .++.++.
T Consensus 252 ~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 323 (367)
T cd08263 252 TGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGG----ATAEIPITRLVRRGIKIIGSYGAR----PRQDLPE 323 (367)
T ss_pred hCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCC----CccccCHHHHhhCCeEEEecCCCC----cHHHHHH
Confidence 655 899999999987 888899999999999999754321 122344445556777777743222 1356788
Q ss_pred HHHHHHCCCccce--eeeecchhhHHHHHHHHHhhh
Q 041355 144 VIPAIREGKMVYV--EDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 144 ~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+.++++++.+++. ++++++++++.++++.++++.
T Consensus 324 ~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~ 359 (367)
T cd08263 324 LVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGL 359 (367)
T ss_pred HHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCC
Confidence 9999999999874 578899999999999988764
No 65
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.79 E-value=2.1e-17 Score=125.10 Aligned_cols=163 Identities=17% Similarity=0.153 Sum_probs=124.4
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCCCC---------------Ccch---HHHHH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK---------------EEPD---LDAAL 62 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~-vi~~~~~~~~---------------~~~~---~~~~~ 62 (180)
++||+++ +..++++|++++|.| +|++|++++|+||.+|++ |+++++++++ ++++ +.+.+
T Consensus 149 ~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~ 226 (343)
T cd05285 149 SVGVHAC-RRAGVRPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKI 226 (343)
T ss_pred HHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHH
Confidence 4677876 788999999999987 689999999999999997 8888776543 2223 25567
Q ss_pred HhHcCC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHH
Q 041355 63 KRWFPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKF 140 (180)
Q Consensus 63 ~~~~~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (180)
.+.+++ ++|+++||+|.. .+...+++++++|+++.++..... ...+......+++.+.+..... +.
T Consensus 227 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~ 294 (343)
T cd05285 227 AELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE------VTLPLSAASLREIDIRGVFRYA------NT 294 (343)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC------CccCHHHHhhCCcEEEEeccCh------HH
Confidence 777766 799999999976 788899999999999998754321 2233345566667766654322 45
Q ss_pred HHHHHHHHHCCCcc--ceeeeecchhhHHHHHHHHHhhhc
Q 041355 141 LELVIPAIREGKMV--YVEDIAEGLEKISRNCYTLKWRVK 178 (180)
Q Consensus 141 ~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~l~~~~~ 178 (180)
+..+++++.++.+. +.+.++++++++.+|++.++++.+
T Consensus 295 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~ 334 (343)
T cd05285 295 YPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKK 334 (343)
T ss_pred HHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCC
Confidence 77788999999875 456778999999999999888753
No 66
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=99.78 E-value=2.4e-17 Score=125.75 Aligned_cols=167 Identities=18% Similarity=0.161 Sum_probs=126.6
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCCCC---------------Ccc--hHHHHHH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK---------------EEP--DLDAALK 63 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~-vi~~~~~~~~---------------~~~--~~~~~~~ 63 (180)
++||+++.+..++++|++++|+| +|++|++++|+||.+|++ |+++.+++++ .+. ++.+.++
T Consensus 169 ~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~ 247 (365)
T cd05279 169 STGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPIVEVLT 247 (365)
T ss_pred hHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccccchHHHHHH
Confidence 57888888888999999999996 799999999999999995 6666655443 223 4556677
Q ss_pred hHcCCCccEEEeCCCh-hhHHHHHHhhc-cCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHH
Q 041355 64 RWFPQGIDIYFENVGG-KMLDAVLLNMR-LRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFL 141 (180)
Q Consensus 64 ~~~~~~~d~~~d~~g~-~~~~~~~~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (180)
+.+++++|+++||+|. ..+..++++++ ++|+++.++.... .....++...+ .++.++.|.....+. ..+.+
T Consensus 248 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~----~~~~~~~~~~~-~~~~~l~g~~~~~~~--~~~~~ 320 (365)
T cd05279 248 EMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPS----GTEATLDPNDL-LTGRTIKGTVFGGWK--SKDSV 320 (365)
T ss_pred HHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCC----CCceeeCHHHH-hcCCeEEEEeccCCc--hHhHH
Confidence 7665689999999985 58888999999 9999999876431 11223444444 566777776554331 23567
Q ss_pred HHHHHHHHCCCccc--eeeeecchhhHHHHHHHHHhh
Q 041355 142 ELVIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 142 ~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~ 176 (180)
..+.+++.++.+.+ .++++++++++++|++.++++
T Consensus 321 ~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~ 357 (365)
T cd05279 321 PKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSG 357 (365)
T ss_pred HHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCC
Confidence 78889999999875 477889999999999988764
No 67
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.78 E-value=4.4e-17 Score=122.25 Aligned_cols=169 Identities=18% Similarity=0.178 Sum_probs=122.4
Q ss_pred hHHHHHHHH--cCCCCCC-EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-------------CcchHHHHHHhHc
Q 041355 3 IVGNLIILV--CSPKKGE-YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-------------EEPDLDAALKRWF 66 (180)
Q Consensus 3 ~a~~~l~~~--~~~~~g~-~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-------------~~~~~~~~~~~~~ 66 (180)
+||+++... ..+.+|+ +++|+|++|++|++++|+|+.+|++++++++++++ ...+....++...
T Consensus 129 ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 208 (323)
T TIGR02823 129 TAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLE 208 (323)
T ss_pred HHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhc
Confidence 455555333 3378898 99999989999999999999999999888776554 1111112334444
Q ss_pred CCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch-HHHHHHHHHHHH
Q 041355 67 PQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYLKFLELVI 145 (180)
Q Consensus 67 ~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 145 (180)
.+++|+++||+|++.+...+++++++|+++.+|..... ....+...++.+++++.+...... .......+..+.
T Consensus 209 ~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (323)
T TIGR02823 209 KERWAGAVDTVGGHTLANVLAQLKYGGAVAACGLAGGP-----DLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLA 283 (323)
T ss_pred CCCceEEEECccHHHHHHHHHHhCCCCEEEEEcccCCC-----CccccHHHHhhcceEEEEEeccccCchhHHHHHHHHH
Confidence 44799999999988888999999999999999875321 112333455578888888664322 222344677778
Q ss_pred HHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 146 PAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++.++.+.+. ..+++++++++|++.++++.
T Consensus 284 ~~~~~~~~~~~-~~~~~l~~~~~a~~~~~~~~ 314 (323)
T TIGR02823 284 TDLKPRNLESI-TREITLEELPEALEQILAGQ 314 (323)
T ss_pred HHhhcCCCcCc-eeeecHHHHHHHHHHHhCCC
Confidence 88888988775 45899999999999987653
No 68
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.78 E-value=3.1e-17 Score=126.05 Aligned_cols=164 Identities=20% Similarity=0.217 Sum_probs=129.3
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------Ccc-hHHHHHHh
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EEP-DLDAALKR 64 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~~-~~~~~~~~ 64 (180)
++||+++ +..++++|++|+|+| +|++|++++|+|+..|+ +|+++++++++ ... ++.+.+++
T Consensus 171 ~ta~~~l-~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~l~~ 248 (386)
T cd08283 171 PTGYHAA-ELAEVKPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEEVDDVVEALRE 248 (386)
T ss_pred hhhHHHH-hhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCcchHHHHHHHH
Confidence 5789998 888999999999997 79999999999999998 68888876543 222 36667777
Q ss_pred HcCC-CccEEEeCCChh----------------------hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhc
Q 041355 65 WFPQ-GIDIYFENVGGK----------------------MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGK 121 (180)
Q Consensus 65 ~~~~-~~d~~~d~~g~~----------------------~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (180)
.+++ ++|++|||+|++ .+..++++++++|+++.++..... ....++...+.+
T Consensus 249 ~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~ 323 (386)
T cd08283 249 LTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGT-----VNKFPIGAAMNK 323 (386)
T ss_pred HcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCC-----cCccCHHHHHhC
Confidence 7776 899999999753 567888999999999999765421 123444456778
Q ss_pred CcEEEeeeccchHHHHHHHHHHHHHHHHCCCccc--eeeeecchhhHHHHHHHHHhhh
Q 041355 122 RIRLEGFLAGDYYHLYLKFLELVIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
++++.+.... ..+.+..+.+++.++.+.+ +++++++++++++|++.++++.
T Consensus 324 ~~~i~~~~~~-----~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~ 376 (386)
T cd08283 324 GLTLRMGQTH-----VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKE 376 (386)
T ss_pred CcEEEeccCC-----chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCC
Confidence 8888876542 2456788899999999987 4668899999999999987764
No 69
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.78 E-value=4.4e-17 Score=123.36 Aligned_cols=167 Identities=16% Similarity=0.190 Sum_probs=130.2
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------Cc-chHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EE-PDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~-~~~~~~~~~~ 65 (180)
++||+++.+..++.++++++|+| +|++|++++|+|+..|++|+++++++++ +. .++...+.+.
T Consensus 151 ~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~ 229 (345)
T cd08260 151 ATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDL 229 (345)
T ss_pred HHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHH
Confidence 57899988888899999999999 7999999999999999999998877543 22 3555666666
Q ss_pred cCCCccEEEeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHH
Q 041355 66 FPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELV 144 (180)
Q Consensus 66 ~~~~~d~~~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (180)
..+++|++|||+|+ ..+...+++++++|+++.+|...... .....++..+..+++++.+..... ...++.+
T Consensus 230 ~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 301 (345)
T cd08260 230 TGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEE---AGVALPMDRVVARELEIVGSHGMP-----AHRYDAM 301 (345)
T ss_pred hCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCC---CccccCHHHHhhcccEEEeCCcCC-----HHHHHHH
Confidence 65589999999985 57888999999999999998654321 012334444557778887766532 3457788
Q ss_pred HHHHHCCCccce--eeeecchhhHHHHHHHHHhhh
Q 041355 145 IPAIREGKMVYV--EDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 145 ~~~~~~g~~~~~--~~~~~~~~~~~~a~~~l~~~~ 177 (180)
.+++.++.+.+. +.+.++++++++|++.++++.
T Consensus 302 ~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~ 336 (345)
T cd08260 302 LALIASGKLDPEPLVGRTISLDEAPDALAAMDDYA 336 (345)
T ss_pred HHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCC
Confidence 899999998763 568899999999999888653
No 70
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.78 E-value=4.5e-17 Score=123.58 Aligned_cols=164 Identities=15% Similarity=0.172 Sum_probs=126.1
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++||+++.+...+++|++|+|+| +|++|++++|+||.+|+ +|+++++++++ .+.++...+.+.
T Consensus 161 ~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 239 (350)
T cd08240 161 LTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRIIKA 239 (350)
T ss_pred hhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHHHHH
Confidence 67899997777777899999996 79999999999999999 78888776543 223445556665
Q ss_pred cCCCccEEEeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHH
Q 041355 66 FPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELV 144 (180)
Q Consensus 66 ~~~~~d~~~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (180)
.++++|+++||+|. ..+..++++|+++|+++.++..... ...+......+++++.+..... .+.+..+
T Consensus 240 ~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~ 308 (350)
T cd08240 240 AGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE------ATLPLPLLPLRALTIQGSYVGS-----LEELREL 308 (350)
T ss_pred hCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC------CcccHHHHhhcCcEEEEcccCC-----HHHHHHH
Confidence 55589999999985 5889999999999999998764421 1122233445777877766543 2557788
Q ss_pred HHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 145 IPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 145 ~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++++++.+++....+++++++++|++.++++.
T Consensus 309 ~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~ 341 (350)
T cd08240 309 VALAKAGKLKPIPLTERPLSDVNDALDDLKAGK 341 (350)
T ss_pred HHHHHcCCCccceeeEEcHHHHHHHHHHHHcCC
Confidence 999999999887677899999999999887653
No 71
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.78 E-value=4.9e-17 Score=122.60 Aligned_cols=167 Identities=16% Similarity=0.160 Sum_probs=122.9
Q ss_pred chHHHHHHHHcCCCC-----CCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCCCC--------------CcchHHHH
Q 041355 2 LIVGNLIILVCSPKK-----GEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEK--------------EEPDLDAA 61 (180)
Q Consensus 2 l~a~~~l~~~~~~~~-----g~~vlI~Ga~g~vG~~~iqlak~~-g~~vi~~~~~~~~--------------~~~~~~~~ 61 (180)
++||+++.+..++++ |++|+|+|++|++|++++|+||.+ |++|+++++++++ ...++...
T Consensus 129 ~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 208 (336)
T TIGR02817 129 ITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSKPLKAQ 208 (336)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCCCHHHH
Confidence 578899888888877 999999999999999999999998 9999999887654 12345566
Q ss_pred HHhHcCCCccEEEeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeecc--ch---HH
Q 041355 62 LKRWFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAG--DY---YH 135 (180)
Q Consensus 62 ~~~~~~~~~d~~~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~ 135 (180)
+++...+++|+++||+++ ..+...+++++++|+++.++... ..+...+..+++++.+.... .. +.
T Consensus 209 i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (336)
T TIGR02817 209 LEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPA---------ELDISPFKRKSISLHWEFMFTRSMFQTAD 279 (336)
T ss_pred HHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEcccc---------cccchhhhhcceEEEEEEeecccccchhh
Confidence 666433489999999864 58889999999999999874211 22333344454665543332 10 11
Q ss_pred H--HHHHHHHHHHHHHCCCccceeeeecc---hhhHHHHHHHHHhhh
Q 041355 136 L--YLKFLELVIPAIREGKMVYVEDIAEG---LEKISRNCYTLKWRV 177 (180)
Q Consensus 136 ~--~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~a~~~l~~~~ 177 (180)
. ....++++.+++.++.+++.+.++++ ++++++|++.++++.
T Consensus 280 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~ 326 (336)
T TIGR02817 280 MIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGK 326 (336)
T ss_pred hhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCC
Confidence 1 12568889999999999987655554 799999999988763
No 72
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.78 E-value=2.1e-17 Score=122.93 Aligned_cols=169 Identities=22% Similarity=0.209 Sum_probs=125.4
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCc----c---hHHHHHHhHcCCCccEEE
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEE----P---DLDAALKRWFPQGIDIYF 74 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~----~---~~~~~~~~~~~~~~d~~~ 74 (180)
++||+++.+.... +|++++|+|+.|++|++++|+++..|++|+++++++++.+ . .......+..++++|+++
T Consensus 119 ~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vl 197 (305)
T cd08270 119 VTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGSELSGAPVDLVV 197 (305)
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccccccCCCceEEE
Confidence 5788888665555 5999999999999999999999999999999988654300 0 000000122234799999
Q ss_pred eCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhh--cCcEEEeeeccchHHHHHHHHHHHHHHHHCCC
Q 041355 75 ENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIG--KRIRLEGFLAGDYYHLYLKFLELVIPAIREGK 152 (180)
Q Consensus 75 d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 152 (180)
||+|+..+...+++++++|+++.++.... .....++..+.. ++.++.++.... +....+.+..+.+++.+++
T Consensus 198 ~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 271 (305)
T cd08270 198 DSVGGPQLARALELLAPGGTVVSVGSSSG-----EPAVFNPAAFVGGGGGRRLYTFFLYD-GEPLAADLARLLGLVAAGR 271 (305)
T ss_pred ECCCcHHHHHHHHHhcCCCEEEEEeccCC-----CcccccHHHHhcccccceEEEEEccC-HHHHHHHHHHHHHHHHCCC
Confidence 99998888999999999999999986531 112233333333 477777777654 2234567888999999999
Q ss_pred ccceeeeecchhhHHHHHHHHHhhh
Q 041355 153 MVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 153 ~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++.+.++++++++++|++.++++.
T Consensus 272 i~~~~~~~~~~~~~~~a~~~~~~~~ 296 (305)
T cd08270 272 LDPRIGWRGSWTEIDEAAEALLARR 296 (305)
T ss_pred ccceeccEEcHHHHHHHHHHHHcCC
Confidence 9988778999999999999987654
No 73
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.78 E-value=6e-17 Score=120.03 Aligned_cols=170 Identities=18% Similarity=0.251 Sum_probs=128.5
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++||+++ +..++++|++++|+|+.+++|++++|+++.+|++|+++++++++ ...++...+...+
T Consensus 107 ~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~ 185 (303)
T cd08251 107 LTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLT 185 (303)
T ss_pred HHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHc
Confidence 5788888 57889999999999999999999999999999999998877533 2335666677777
Q ss_pred CC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch----HHHHHHHH
Q 041355 67 PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY----YHLYLKFL 141 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 141 (180)
++ ++|.++||+++......+++++++|+++.++...... ....... .+.++..+........ .....+.+
T Consensus 186 ~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (303)
T cd08251 186 GGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKS----APSVDLS-VLSNNQSFHSVDLRKLLLLDPEFIADYQ 260 (303)
T ss_pred CCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCc----cCccChh-HhhcCceEEEEehHHhhhhCHHHHHHHH
Confidence 76 8999999998888888999999999999987654211 1112222 2334444444433221 22344667
Q ss_pred HHHHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 142 ELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
.++.+++.+|.+++..++.+++++++++++.++++.
T Consensus 261 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (303)
T cd08251 261 AEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRE 296 (303)
T ss_pred HHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCC
Confidence 888999999999888778899999999999887754
No 74
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.78 E-value=4.8e-17 Score=122.78 Aligned_cols=162 Identities=17% Similarity=0.168 Sum_probs=125.9
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
+++++++ +..++++|++|||+| +|++|++++|+|+.+|++|+++.+++++ .+.++.+.+.+.+
T Consensus 146 ~~a~~~~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~ 223 (337)
T cd08261 146 AIGAHAV-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELT 223 (337)
T ss_pred HHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHh
Confidence 4567777 778899999999996 7999999999999999999988776543 2235566777777
Q ss_pred CC-CccEEEeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHH
Q 041355 67 PQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELV 144 (180)
Q Consensus 67 ~~-~~d~~~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (180)
++ ++|+++||+|+ ..+..++++++++|+++.++.... ....+...+..+++++.+... ...+.++.+
T Consensus 224 ~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 292 (337)
T cd08261 224 DGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKG------PVTFPDPEFHKKELTILGSRN-----ATREDFPDV 292 (337)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCC------CCccCHHHHHhCCCEEEEecc-----CChhhHHHH
Confidence 66 89999999986 478889999999999999875431 112333445556677666532 124567788
Q ss_pred HHHHHCCCccc--eeeeecchhhHHHHHHHHHhh
Q 041355 145 IPAIREGKMVY--VEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 145 ~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~ 176 (180)
.+++.+|.+++ .+..++++++++++++.++++
T Consensus 293 ~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~ 326 (337)
T cd08261 293 IDLLESGKVDPEALITHRFPFEDVPEAFDLWEAP 326 (337)
T ss_pred HHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcC
Confidence 99999999998 677889999999999998865
No 75
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.77 E-value=4.4e-17 Score=123.29 Aligned_cols=163 Identities=19% Similarity=0.144 Sum_probs=126.0
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC--------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK--------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~--------------~~~~~~~~~~~~~ 66 (180)
++||+++. ..++++|++|+|+| +|++|++++|+|+.+|+ +|+++++++++ +..++...+.+.+
T Consensus 154 ~ta~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~ 231 (344)
T cd08284 154 PTGYFGAK-RAQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAEPINFEDAEPVERVREAT 231 (344)
T ss_pred HHHHhhhH-hcCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCeEEecCCcCHHHHHHHHh
Confidence 67899984 57889999999997 79999999999999997 88888655433 2335566677777
Q ss_pred CC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHH
Q 041355 67 PQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELV 144 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (180)
++ ++|++|||+|+. .+...+++++++|+++.+|..... .........+.+++++.+... .....++.+
T Consensus 232 ~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 301 (344)
T cd08284 232 EGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAE-----EFPFPGLDAYNKNLTLRFGRC-----PVRSLFPEL 301 (344)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCC-----CccccHHHHhhcCcEEEEecC-----CcchhHHHH
Confidence 65 899999999964 788889999999999999865421 112334456677777764421 124568889
Q ss_pred HHHHHCCCccc--eeeeecchhhHHHHHHHHHhh
Q 041355 145 IPAIREGKMVY--VEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 145 ~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~ 176 (180)
.+++.++.+.+ ++.+++++++++++++.++.+
T Consensus 302 ~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~ 335 (344)
T cd08284 302 LPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKR 335 (344)
T ss_pred HHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcC
Confidence 99999999886 467889999999999987764
No 76
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.77 E-value=3.6e-17 Score=125.63 Aligned_cols=164 Identities=21% Similarity=0.185 Sum_probs=126.0
Q ss_pred chHHHHHHHH-cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------C---cchHHHH
Q 041355 2 LIVGNLIILV-CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------E---EPDLDAA 61 (180)
Q Consensus 2 l~a~~~l~~~-~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~---~~~~~~~ 61 (180)
++||+++... .++++|++|+|+| +|++|++++|+|+.+|+ +|+++++++++ . ..++...
T Consensus 188 ~ta~~al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~ 266 (384)
T cd08265 188 SVAYNGLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEK 266 (384)
T ss_pred HHHHHHHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHH
Confidence 5688888666 6899999999996 79999999999999999 78888876543 1 1256677
Q ss_pred HHhHcCC-CccEEEeCCChh--hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHH
Q 041355 62 LKRWFPQ-GIDIYFENVGGK--MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYL 138 (180)
Q Consensus 62 ~~~~~~~-~~d~~~d~~g~~--~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (180)
+++.+++ ++|+++||+|+. .+..++++++++|+++.++.... ....++.....+..++.+...... .
T Consensus 267 v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~l~~~~~~~~----~ 336 (384)
T cd08265 267 VMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT------TVPLHLEVLQVRRAQIVGAQGHSG----H 336 (384)
T ss_pred HHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC------CCcccHHHHhhCceEEEEeeccCC----c
Confidence 8888876 899999999963 67888999999999999976432 112333445556667776654321 3
Q ss_pred HHHHHHHHHHHCCCccce--eeeecchhhHHHHHHHHHhh
Q 041355 139 KFLELVIPAIREGKMVYV--EDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 139 ~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~l~~~ 176 (180)
..+.++++++.++.+++. ++++|+++++++|++.++++
T Consensus 337 ~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~ 376 (384)
T cd08265 337 GIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER 376 (384)
T ss_pred chHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC
Confidence 457788999999999863 67889999999999986654
No 77
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=99.77 E-value=6.2e-17 Score=122.26 Aligned_cols=162 Identities=19% Similarity=0.157 Sum_probs=125.4
Q ss_pred chHHHHHHHH-cCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCCCC--------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILV-CSPKKGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEK--------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~-~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g-~~vi~~~~~~~~--------------~~~~~~~~~~~~ 65 (180)
++||+++.+. ..+.+|++|+|+| +|++|++++|+|+..| ++|+++++++++ ....+...+++.
T Consensus 152 ~ta~~~l~~~~~~~~~~~~vlI~g-~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~ 230 (340)
T cd05284 152 LTAYHAVKKALPYLDPGSTVVVIG-VGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDDVVEEVREL 230 (340)
T ss_pred HHHHHHHHHhcccCCCCCEEEEEc-CcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCccHHHHHHHH
Confidence 5789998776 4688999999999 6679999999999999 799988887643 111255667777
Q ss_pred cCC-CccEEEeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
+++ ++|+++||+|+ ......+++++++|+++.++.... ...+....+.+++++.+..... ...+..
T Consensus 231 ~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 298 (340)
T cd05284 231 TGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-------GRLPTSDLVPTEISVIGSLWGT-----RAELVE 298 (340)
T ss_pred hCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-------CccCHHHhhhcceEEEEEeccc-----HHHHHH
Confidence 765 89999999996 588889999999999999975431 1223334456788887766432 345777
Q ss_pred HHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 144 VIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 144 ~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+.+++.++.+++.+ ++++++++++|++.++++.
T Consensus 299 ~~~~l~~g~l~~~~-~~~~~~~~~~a~~~~~~~~ 331 (340)
T cd05284 299 VVALAESGKVKVEI-TKFPLEDANEALDRLREGR 331 (340)
T ss_pred HHHHHHhCCCCcce-EEEeHHHHHHHHHHHHcCC
Confidence 88999999998744 5799999999999988753
No 78
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.77 E-value=1.2e-16 Score=119.27 Aligned_cols=171 Identities=25% Similarity=0.323 Sum_probs=132.4
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
+++|+++.+...+.++++++|+|++|++|++++++++..|++|+++.+++++ ...++...+.+..
T Consensus 125 ~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 204 (323)
T cd05276 125 FTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEAT 204 (323)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHh
Confidence 4678888777889999999999999999999999999999999988876432 2234555566665
Q ss_pred CC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch-----HHHHHHH
Q 041355 67 PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-----YHLYLKF 140 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 140 (180)
.+ ++|+++||+|+......+.+++++|+++.++..... ....++..++.+++++.+...... +......
T Consensus 205 ~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (323)
T cd05276 205 GGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLGGA-----KAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAF 279 (323)
T ss_pred CCCCeEEEEECCchHHHHHHHHhhccCCEEEEEecCCCC-----CCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHH
Confidence 55 899999999988888889999999999999865432 112344445567888888775432 2223456
Q ss_pred HHHHHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 141 LELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 141 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+.++.+++.++.+.+..++.+++++++++++.+.++.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 316 (323)
T cd05276 280 REHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNE 316 (323)
T ss_pred HHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCC
Confidence 6778889999999888778899999999999887653
No 79
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.77 E-value=1.1e-16 Score=120.53 Aligned_cols=165 Identities=25% Similarity=0.273 Sum_probs=133.7
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------Cc-chHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EE-PDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~-~~~~~~~~~~ 65 (180)
++||+++.+...+++|++++|+| +|++|++++++++..|++|+++.+++++ .. +++...+++.
T Consensus 146 ~~a~~~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 224 (336)
T cd08276 146 LTAWNALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKL 224 (336)
T ss_pred HHHHHHHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHH
Confidence 46888887778899999999996 8999999999999999999998887543 22 4566677777
Q ss_pred cCC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELV 144 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (180)
+++ ++|+++||++...+..++.+++++|+++.++..... ....+....+.+++++.+..... ...+.++
T Consensus 225 ~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 294 (336)
T cd08276 225 TGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGF-----EAPVLLLPLLTKGATLRGIAVGS-----RAQFEAM 294 (336)
T ss_pred cCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCC-----ccCcCHHHHhhcceEEEEEecCc-----HHHHHHH
Confidence 776 899999999988888999999999999999865432 11234456778889988887643 3467778
Q ss_pred HHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 145 IPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 145 ~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
.+++.++.+.+.+.+++++++++++++.+.++.
T Consensus 295 ~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~ 327 (336)
T cd08276 295 NRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGS 327 (336)
T ss_pred HHHHHcCCcccccCcEEeHHHHHHHHHHHHhCC
Confidence 899999998887778899999999999887653
No 80
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.77 E-value=7.5e-17 Score=122.13 Aligned_cols=162 Identities=18% Similarity=0.123 Sum_probs=125.6
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g-~~vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++||+++....++++|++++|.| +|++|++++|++|.+| .+|+++.+++++ ...++...+.+.
T Consensus 152 ~ta~~~~~~~~~~~~g~~vlI~g-~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~ 230 (345)
T cd08286 152 PTGYECGVLNGKVKPGDTVAIVG-AGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLEL 230 (345)
T ss_pred HHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHH
Confidence 57788777788899999999987 6999999999999999 688887665433 223455566666
Q ss_pred cCC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
+++ ++|+++||+|.. .+..+++.++++|+++.+|.... ....++...+.+++++.+.... ...++.
T Consensus 231 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 298 (345)
T cd08286 231 TDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK------PVDLHLEKLWIKNITITTGLVD------TNTTPM 298 (345)
T ss_pred hCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC------CCCcCHHHHhhcCcEEEeecCc------hhhHHH
Confidence 665 899999999864 77888899999999999986431 1234555667788888765432 135777
Q ss_pred HHHHHHCCCccc--eeeeecchhhHHHHHHHHHhh
Q 041355 144 VIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 144 ~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~ 176 (180)
+.++++++.+.+ .+++++++++++++++.++..
T Consensus 299 ~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~ 333 (345)
T cd08286 299 LLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAA 333 (345)
T ss_pred HHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhcc
Confidence 889999999876 367889999999999998865
No 81
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.77 E-value=1.4e-16 Score=120.02 Aligned_cols=166 Identities=25% Similarity=0.345 Sum_probs=131.8
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++||+++.+..++.++++++|+|+++++|++++++++..|++|+.+++++++ ...+....+.+.+
T Consensus 152 ~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (342)
T cd08266 152 LTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELT 231 (342)
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHh
Confidence 4678888788889999999999999999999999999999999988876543 2234445566655
Q ss_pred CC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHH
Q 041355 67 PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVI 145 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (180)
.+ ++|++++++|...+...+++++++|+++.++..... ....+....+.+++++.+..... ...+.++.
T Consensus 232 ~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 301 (342)
T cd08266 232 GKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWRQLSILGSTMGT-----KAELDEAL 301 (342)
T ss_pred CCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCC-----CCCcCHHHHhhcceEEEEEecCC-----HHHHHHHH
Confidence 54 899999999988888999999999999999865431 12334445567788887776543 34577888
Q ss_pred HHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 146 PAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++.++.+++.+++.|+++++++|++.+.++.
T Consensus 302 ~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~ 333 (342)
T cd08266 302 RLVFRGKLKPVIDSVFPLEEAAEAHRRLESRE 333 (342)
T ss_pred HHHHcCCcccceeeeEcHHHHHHHHHHHHhCC
Confidence 99999999988888999999999999887653
No 82
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.77 E-value=1.1e-16 Score=119.50 Aligned_cols=169 Identities=24% Similarity=0.233 Sum_probs=132.9
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++||+++.+..++.+|++++|+|+++++|++++++++..|++|+++++++++ ...++...+++.+
T Consensus 130 ~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 209 (325)
T cd08253 130 LTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAAT 209 (325)
T ss_pred HHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHc
Confidence 5688888777899999999999999999999999999999999999886543 2334556676666
Q ss_pred CC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch-HHHHHHHHHHH
Q 041355 67 PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYLKFLELV 144 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 144 (180)
++ ++|+++||+|+......+++++++|+++.++.... ....+...++.++.++.+...... +....+.+..+
T Consensus 210 ~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (325)
T cd08253 210 AGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSGGL------RGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAI 283 (325)
T ss_pred CCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeecCC------cCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHH
Confidence 65 89999999998888888899999999999987541 112333444667777776654322 33455678888
Q ss_pred HHHHHCCCccceeeeecchhhHHHHHHHHHhh
Q 041355 145 IPAIREGKMVYVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 145 ~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
.+++.++.+++....++++++++++++.+.++
T Consensus 284 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 315 (325)
T cd08253 284 AAGLADGALRPVIAREYPLEEAAAAHEAVESG 315 (325)
T ss_pred HHHHHCCCccCccccEEcHHHHHHHHHHHHcC
Confidence 88999999988877889999999999988764
No 83
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.77 E-value=1.1e-16 Score=120.12 Aligned_cols=170 Identities=17% Similarity=0.155 Sum_probs=121.1
Q ss_pred chHHHHHHHHcC--CC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCS--PK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~--~~-~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-------------~~~~~~~~~~~~ 65 (180)
++||+++....+ ++ .+++|+|+|++|++|++++|+||.+|++|+++++++++ +..+......+.
T Consensus 129 ~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 208 (325)
T cd05280 129 FTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKP 208 (325)
T ss_pred HHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHH
Confidence 356777755443 35 35799999999999999999999999999988887654 111111122233
Q ss_pred c-CCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch-HHHHHHHHHH
Q 041355 66 F-PQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYLKFLEL 143 (180)
Q Consensus 66 ~-~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 143 (180)
. ++++|+++||+|+..+...+++++++|+++.+|..... ....++..++.+++++.+...... .......++.
T Consensus 209 ~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (325)
T cd05280 209 LLKARWAGAIDTVGGDVLANLLKQTKYGGVVASCGNAAGP-----ELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQK 283 (325)
T ss_pred hcCCCccEEEECCchHHHHHHHHhhcCCCEEEEEecCCCC-----ccccccchheeeeeEEEEEEeecCchhHHHHHHHH
Confidence 3 34799999999998999999999999999999875421 112333444467888888765432 2233456667
Q ss_pred HHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 144 VIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 144 ~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+.+++..+. .+.+..+++++++++|++.+.++.
T Consensus 284 ~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~ 316 (325)
T cd05280 284 LATEWKPDL-LEIVVREISLEELPEAIDRLLAGK 316 (325)
T ss_pred HHHHHhcCC-ccceeeEecHHHHHHHHHHHhcCC
Confidence 777777774 445678899999999999988664
No 84
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.76 E-value=1.1e-16 Score=122.08 Aligned_cols=168 Identities=21% Similarity=0.189 Sum_probs=128.4
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~-vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++||+++.+..++++|++|+|+| +|++|++++|+++..|++ |+++.+++++ +..++...+++.
T Consensus 168 ~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~l~~~ 246 (363)
T cd08279 168 TTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASEDDAVEAVRDL 246 (363)
T ss_pred HHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCccHHHHHHHH
Confidence 57888888888999999999996 799999999999999995 8888776544 223556667777
Q ss_pred cCC-CccEEEeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
+++ ++|+++||++. ..+...+++++++|+++.++.... ......+...+..++..+.+..+... ...+.+++
T Consensus 247 ~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 320 (363)
T cd08279 247 TDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPP----GETVSLPALELFLSEKRLQGSLYGSA--NPRRDIPR 320 (363)
T ss_pred cCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCC----CcccccCHHHHhhcCcEEEEEEecCc--CcHHHHHH
Confidence 655 89999999994 578889999999999999976442 11223444455556666666654321 12456888
Q ss_pred HHHHHHCCCccc--eeeeecchhhHHHHHHHHHhh
Q 041355 144 VIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 144 ~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~ 176 (180)
+.+++.++.+++ .+.++++++++++|++.++++
T Consensus 321 ~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~ 355 (363)
T cd08279 321 LLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAG 355 (363)
T ss_pred HHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcC
Confidence 899999999986 367889999999999988765
No 85
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.76 E-value=9.3e-17 Score=121.44 Aligned_cols=165 Identities=20% Similarity=0.141 Sum_probs=125.9
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~-vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++||+++. ..++++|++|+|+| +|++|++++|+|+..|++ |+++.+++++ ++.++.+.+++.
T Consensus 152 ~~a~~~l~-~~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~ 229 (343)
T cd08235 152 ACCINAQR-KAGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVREL 229 (343)
T ss_pred HHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHH
Confidence 46788884 45899999999997 799999999999999998 8877766543 334566667777
Q ss_pred cCC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
+++ ++|+++||+++. .+...+++++++|+++.++..... .....+......+++.+.+..... .+.++.
T Consensus 230 ~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~ 300 (343)
T cd08235 230 TDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKG----STVNIDPNLIHYREITITGSYAAS-----PEDYKE 300 (343)
T ss_pred hCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCC----CCcccCHHHHhhCceEEEEEecCC-----hhhHHH
Confidence 766 799999999965 788889999999999998764421 122334455666777776655432 345777
Q ss_pred HHHHHHCCCccc--eeeeecchhhHHHHHHHHHhhh
Q 041355 144 VIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 144 ~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+.+++.++.+++ .+..++++++++++++.++++.
T Consensus 301 ~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~ 336 (343)
T cd08235 301 ALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK 336 (343)
T ss_pred HHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC
Confidence 889999999873 5567899999999999887653
No 86
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.76 E-value=2e-16 Score=118.12 Aligned_cols=170 Identities=28% Similarity=0.322 Sum_probs=132.7
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++|++++.+...+.+|++++|+|+.|++|++++++++..|+.|+++++++++ ...++...++..+
T Consensus 125 ~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~ 204 (323)
T cd08241 125 GTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALT 204 (323)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHc
Confidence 4678888778889999999999988999999999999999999998887543 2235566677777
Q ss_pred CC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch----HHHHHHHH
Q 041355 67 PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY----YHLYLKFL 141 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 141 (180)
++ ++|.+++|+|+.....++++++++|+++.++..... .........+.+++++.+...... +......+
T Consensus 205 ~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (323)
T cd08241 205 GGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASGE-----IPQIPANLLLLKNISVVGVYWGAYARREPELLRANL 279 (323)
T ss_pred CCCCcEEEEECccHHHHHHHHHhhccCCEEEEEccCCCC-----cCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHH
Confidence 66 899999999988888889999999999998764321 111233345667888887765432 22234677
Q ss_pred HHHHHHHHCCCccceeeeecchhhHHHHHHHHHhh
Q 041355 142 ELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
.++.+++.++.+.+..+..+++++++++++.+.++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (323)
T cd08241 280 AELFDLLAEGKIRPHVSAVFPLEQAAEALRALADR 314 (323)
T ss_pred HHHHHHHHCCCcccccceEEcHHHHHHHHHHHHhC
Confidence 88999999999988877889999999999987765
No 87
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.76 E-value=2e-16 Score=118.25 Aligned_cols=170 Identities=25% Similarity=0.296 Sum_probs=133.1
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
+++|+++.+..++++|++++|+|++|++|++++++++.+|++|+++++++++ ...++...++...
T Consensus 125 ~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 204 (325)
T TIGR02824 125 FTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAET 204 (325)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHc
Confidence 4678887788899999999999999999999999999999999988876543 2234555666666
Q ss_pred CC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch-----HHHHHHH
Q 041355 67 PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-----YHLYLKF 140 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 140 (180)
.+ ++|++++|+|+..+..++++++++|+++.++..... ....++..++.+++++.+...... +......
T Consensus 205 ~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (325)
T TIGR02824 205 GGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQGGR-----KAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAEL 279 (325)
T ss_pred CCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecCCCC-----cCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHH
Confidence 65 899999999988888899999999999999865421 113444555578999988875442 1123456
Q ss_pred HHHHHHHHHCCCccceeeeecchhhHHHHHHHHHhh
Q 041355 141 LELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 141 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
+.++.+++.++.+.+..++.+++++++++++.+.++
T Consensus 280 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 315 (325)
T TIGR02824 280 REHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESG 315 (325)
T ss_pred HHHHHHHHHCCcccCccccEEeHHHHHHHHHHHHhC
Confidence 677889999999988777889999999999987765
No 88
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.76 E-value=1.1e-16 Score=121.56 Aligned_cols=162 Identities=19% Similarity=0.137 Sum_probs=121.8
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~-vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
+++|+++ +..++++|++|+| +|+|++|++++|+|+.+|++ ++++++++++ ...++...+.+.
T Consensus 161 ~ta~~a~-~~~~~~~g~~vlI-~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 238 (350)
T cd08256 161 ACALHAV-DRANIKFDDVVVL-AGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEKIKEL 238 (350)
T ss_pred HHHHHHH-HhcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHH
Confidence 5788887 7889999999999 55899999999999999985 5566655433 233566677777
Q ss_pred cCC-CccEEEeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHH-hhcCcEEEeeeccchHHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQL-IGKRIRLEGFLAGDYYHLYLKFLE 142 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 142 (180)
+++ ++|++|||+|+ ..+..++++++++|+++.++..... ....+... ..+++++.++.... ..+.
T Consensus 239 ~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~i~~~~~~~------~~~~ 306 (350)
T cd08256 239 TGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDP------VTVDWSIIGDRKELDVLGSHLGP------YCYP 306 (350)
T ss_pred hCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCC------CccChhHhhcccccEEEEeccCc------hhHH
Confidence 766 89999999995 4788899999999999999754311 11222222 24556666655432 2477
Q ss_pred HHHHHHHCCCccce--eeeecchhhHHHHHHHHHhhh
Q 041355 143 LVIPAIREGKMVYV--EDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 143 ~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~l~~~~ 177 (180)
++.+++.+|.+++. +.++++++++++|++.++++.
T Consensus 307 ~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~ 343 (350)
T cd08256 307 IAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGD 343 (350)
T ss_pred HHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCC
Confidence 78999999999873 678899999999999988764
No 89
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.76 E-value=1.3e-16 Score=120.65 Aligned_cols=168 Identities=18% Similarity=0.188 Sum_probs=126.7
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~-vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++||+++. ..++++|++|+|+| +|++|++++|+|+.+|++ |+++++++++ +... ...+++.
T Consensus 146 ~ta~~~l~-~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~ 222 (343)
T cd08236 146 AVALHAVR-LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED-VEKVREL 222 (343)
T ss_pred HHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc-HHHHHHH
Confidence 57888884 78899999999997 799999999999999996 8888876543 2223 5566666
Q ss_pred cCC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
.++ ++|+++||+|.. .+..++++++++|+++.++..... ..........++.++.++.++..........+.+.+
T Consensus 223 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (343)
T cd08236 223 TEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD---VTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRT 299 (343)
T ss_pred hCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC---cccccCCHHHHHhcCcEEEEEeeccccccchhhHHH
Confidence 665 799999999864 778889999999999999865321 111122334456778888877653322123456788
Q ss_pred HHHHHHCCCcc--ceeeeecchhhHHHHHHHHHh
Q 041355 144 VIPAIREGKMV--YVEDIAEGLEKISRNCYTLKW 175 (180)
Q Consensus 144 ~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~l~~ 175 (180)
+.+++.++.+. +.+..++++++++++++.+++
T Consensus 300 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 333 (343)
T cd08236 300 ALDLLASGKIKVEPLITHRLPLEDGPAAFERLAD 333 (343)
T ss_pred HHHHHHcCCCChHHheeeeecHHHHHHHHHHHHc
Confidence 89999999986 456688999999999999887
No 90
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.76 E-value=1.4e-16 Score=119.61 Aligned_cols=162 Identities=20% Similarity=0.182 Sum_probs=120.4
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------CcchHHHHHHhHcCCCccE
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------EEPDLDAALKRWFPQGIDI 72 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------~~~~~~~~~~~~~~~~~d~ 72 (180)
++||+++. ..++++|++++|+|++|++|++++++|+.+|++|+++++.+.. +..+..+.+++.+ +++|+
T Consensus 149 ~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~-~~~d~ 226 (325)
T cd08264 149 LTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSRKDWLKEFGADEVVDYDEVEEKVKEIT-KMADV 226 (325)
T ss_pred HHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeHHHHHHHhCCCeeecchHHHHHHHHHh-CCCCE
Confidence 57888884 4889999999999988999999999999999998888753211 1222334455555 67999
Q ss_pred EEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHHHHHHCCC
Q 041355 73 YFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIPAIREGK 152 (180)
Q Consensus 73 ~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 152 (180)
++||+|...+...+++++++|+++.++.... .....++..+..++.++.+..... ++.+.++++++.+.
T Consensus 227 vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~- 295 (325)
T cd08264 227 VINSLGSSFWDLSLSVLGRGGRLVTFGTLTG-----GEVKLDLSDLYSKQISIIGSTGGT-----RKELLELVKIAKDL- 295 (325)
T ss_pred EEECCCHHHHHHHHHhhccCCEEEEEecCCC-----CCCccCHHHHhhcCcEEEEccCCC-----HHHHHHHHHHHHcC-
Confidence 9999998888899999999999999976421 112345555666677777655433 34566777777543
Q ss_pred ccceeeeecchhhHHHHHHHHHhhh
Q 041355 153 MVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 153 ~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
++.+.++++++++++|++.+.++.
T Consensus 296 -~~~~~~~~~~~~~~~a~~~~~~~~ 319 (325)
T cd08264 296 -KVKVWKTFKLEEAKEALKELFSKE 319 (325)
T ss_pred -CceeEEEEcHHHHHHHHHHHHcCC
Confidence 345668899999999999877653
No 91
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.75 E-value=2.1e-16 Score=118.74 Aligned_cols=163 Identities=26% Similarity=0.290 Sum_probs=123.5
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-------------CcchHHHHHHhHcCC
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-------------EEPDLDAALKRWFPQ 68 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-------------~~~~~~~~~~~~~~~ 68 (180)
++||+++.. .+++++++++|+||+|++|++++++++..|++|+++++++++ +..++.+.+.+..
T Consensus 149 ~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 225 (332)
T cd08259 149 GTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSKFSEDVKKLG-- 225 (332)
T ss_pred HHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHHHHHHHHhcc--
Confidence 578888866 889999999999999999999999999999999988876543 1111233333322
Q ss_pred CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHHHHH
Q 041355 69 GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIPAI 148 (180)
Q Consensus 69 ~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (180)
++|++++|+|.......+++++++|+++.++..... ....+......++..+.+.... ....++++.+++
T Consensus 226 ~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 295 (332)
T cd08259 226 GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPD-----PAPLRPGLLILKEIRIIGSISA-----TKADVEEALKLV 295 (332)
T ss_pred CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCC-----CcCCCHHHHHhCCcEEEEecCC-----CHHHHHHHHHHH
Confidence 799999999988888899999999999999765421 1112223333466666665422 245677889999
Q ss_pred HCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 149 REGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 149 ~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
.++.+++.++++++++++++|++.++++.
T Consensus 296 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~ 324 (332)
T cd08259 296 KEGKIKPVIDRVVSLEDINEALEDLKSGK 324 (332)
T ss_pred HcCCCccceeEEEcHHHHHHHHHHHHcCC
Confidence 99999988888999999999999988653
No 92
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.75 E-value=1.1e-16 Score=121.22 Aligned_cols=163 Identities=19% Similarity=0.175 Sum_probs=122.5
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++||+++ ...++++|++|+|.| +|++|++++|+||.+|+ .|+++.+++++ ...++.+.+++.
T Consensus 154 ~ta~~~~-~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~ 231 (347)
T cd05278 154 PTGFHGA-ELAGIKPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILEL 231 (347)
T ss_pred hheeehh-hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHH
Confidence 6788887 678899999999976 69999999999999997 78888665432 233455667776
Q ss_pred cCC-CccEEEeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
+++ ++|++|||+|+ ..+...+++++++|+++.++..... .........+.+++++.+..... ...+++
T Consensus 232 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 301 (347)
T cd05278 232 TGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKP-----DPLPLLGEWFGKNLTFKTGLVPV-----RARMPE 301 (347)
T ss_pred cCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCC-----cccCccchhhhceeEEEeeccCc-----hhHHHH
Confidence 665 89999999997 5888899999999999999754321 10001122345666766654322 456888
Q ss_pred HHHHHHCCCccce--eeeecchhhHHHHHHHHHhh
Q 041355 144 VIPAIREGKMVYV--EDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 144 ~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~l~~~ 176 (180)
+.+++.++.+++. +..+++++++++|++.++.+
T Consensus 302 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~ 336 (347)
T cd05278 302 LLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNK 336 (347)
T ss_pred HHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcC
Confidence 9999999999873 56789999999999988754
No 93
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.75 E-value=1.8e-16 Score=121.35 Aligned_cols=168 Identities=19% Similarity=0.145 Sum_probs=124.4
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC--------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK--------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~--------------~~~~~~~~~~~~~ 66 (180)
++||+++ +..++++|++|+|.| +|++|++++|++|.+|+ +|+++++++++ .++++.+.+++.+
T Consensus 163 ~ta~~a~-~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~ 240 (375)
T cd08282 163 PTGWHGL-ELAGVQPGDTVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIPIDFSDGDPVEQILGLE 240 (375)
T ss_pred HHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCeEeccCcccHHHHHHHhh
Confidence 5789998 788899999999976 79999999999999998 78887665443 2334556666666
Q ss_pred CCCccEEEeCCChh------------hHHHHHHhhccCCEEEEEeccccccCCC-------CccccchHHHhhcCcEEEe
Q 041355 67 PQGIDIYFENVGGK------------MLDAVLLNMRLRGRIAVSSIISQYNLEK-------PEGVHNLEQLIGKRIRLEG 127 (180)
Q Consensus 67 ~~~~d~~~d~~g~~------------~~~~~~~~l~~~G~~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 127 (180)
++++|+++||+|.. .+..++.+++++|+++.++......... ....++...++.++..+.+
T Consensus 241 ~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (375)
T cd08282 241 PGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGT 320 (375)
T ss_pred CCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEE
Confidence 66799999999876 3788899999999998877643211100 0122344455556665554
Q ss_pred eeccchHHHHHHHHHHHHHHHHCCCccc--eeeeecchhhHHHHHHHHHhh
Q 041355 128 FLAGDYYHLYLKFLELVIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~ 176 (180)
.... .++.+..+.+++.++.+++ .+.++++++++++|++.++++
T Consensus 321 ~~~~-----~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~ 366 (375)
T cd08282 321 GQAP-----VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKR 366 (375)
T ss_pred ecCC-----chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcC
Confidence 3321 2456778889999999987 378999999999999988765
No 94
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.75 E-value=2.3e-16 Score=118.89 Aligned_cols=162 Identities=23% Similarity=0.239 Sum_probs=125.2
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++||+++.+..+++++++|+|.| +|++|++++|+|+..|++|+++++++++ ........+ ...
T Consensus 151 ~ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~ 228 (338)
T cd08254 151 LTPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKK-AAG 228 (338)
T ss_pred HHHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHH-HHh
Confidence 57899988888899999999976 7999999999999999999988876543 222333444 334
Q ss_pred CC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHH
Q 041355 67 PQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELV 144 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (180)
.+ ++|+++||+|.. .+..++++++++|+++.++.... ....+...+..++.++.+..... ...+..+
T Consensus 229 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 297 (338)
T cd08254 229 LGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD------KLTVDLSDLIARELRIIGSFGGT-----PEDLPEV 297 (338)
T ss_pred cCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCC------CCccCHHHHhhCccEEEEeccCC-----HHHHHHH
Confidence 44 899999999855 88899999999999999976432 12234455667777777655432 3567788
Q ss_pred HHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 145 IPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 145 ~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
.++++++.+.+. .+++++++++++++.++++.
T Consensus 298 ~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~ 329 (338)
T cd08254 298 LDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGK 329 (338)
T ss_pred HHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCC
Confidence 899999999877 57899999999999888654
No 95
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.75 E-value=4.5e-16 Score=114.41 Aligned_cols=171 Identities=18% Similarity=0.205 Sum_probs=129.9
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-----------------CcchHHHHHHh
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-----------------EEPDLDAALKR 64 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-----------------~~~~~~~~~~~ 64 (180)
+++|+++.+...+++|++++|+|+.|++|++++|+++.+|++|+++++++++ ...++.+.+++
T Consensus 94 ~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (293)
T cd05195 94 LTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVDHIFSSRDLSFADGILR 173 (293)
T ss_pred HHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCCcceEeecCchhHHHHHHH
Confidence 4677888777889999999999999999999999999999999998886432 22345566777
Q ss_pred HcCC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch----HHHHHH
Q 041355 65 WFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY----YHLYLK 139 (180)
Q Consensus 65 ~~~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 139 (180)
.+.+ ++|.++||+|+..+...+.+++++|+++.++...... ...... ..+.+++++........ ......
T Consensus 174 ~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (293)
T cd05195 174 ATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILS----NSKLGM-RPFLRNVSFSSVDLDQLARERPELLRE 248 (293)
T ss_pred HhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeecccccc----CCccch-hhhccCCeEEEEeHHHHhhhChHHHHH
Confidence 7665 8999999999888899999999999999998654211 011111 22344566666554332 122345
Q ss_pred HHHHHHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 140 FLELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 140 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
.+..+.+++.++.+.+..+..++++++.++++.++++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 286 (293)
T cd05195 249 LLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGK 286 (293)
T ss_pred HHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCC
Confidence 67888999999999988888899999999999888664
No 96
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.75 E-value=2.5e-16 Score=119.21 Aligned_cols=162 Identities=18% Similarity=0.225 Sum_probs=125.0
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~-vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++||+++ +..++++|++++|.| +|++|++++|+||..|++ ++++++++++ ...++.+.+.+.
T Consensus 155 ~~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~~ 232 (345)
T cd08287 155 GTGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVREL 232 (345)
T ss_pred HHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHHHh
Confidence 4577777 467899999999976 899999999999999995 6666665432 223456667777
Q ss_pred cCC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
+++ ++|+++||+|+. .+..++++++++|+++.++.... ...+++...+.+++++.+.... ..+.+.+
T Consensus 233 ~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 301 (345)
T cd08287 233 TGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG------GVELDVRELFFRNVGLAGGPAP-----VRRYLPE 301 (345)
T ss_pred cCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC------CCccCHHHHHhcceEEEEecCC-----cHHHHHH
Confidence 766 899999999864 88899999999999998875431 1234444667888888774432 2456888
Q ss_pred HHHHHHCCCccc--eeeeecchhhHHHHHHHHHhh
Q 041355 144 VIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 144 ~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~ 176 (180)
+++++.++.+++ .++++++++++++|++.++++
T Consensus 302 ~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~ 336 (345)
T cd08287 302 LLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDER 336 (345)
T ss_pred HHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCC
Confidence 999999999987 467889999999999887764
No 97
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.74 E-value=5.8e-16 Score=113.73 Aligned_cols=171 Identities=19% Similarity=0.227 Sum_probs=127.9
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-----------------CcchHHHHHHh
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-----------------EEPDLDAALKR 64 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-----------------~~~~~~~~~~~ 64 (180)
+++|+++.+...+.+|++++|+|+.|++|++++|+++.+|++|+++++++++ ..+++.+.+.+
T Consensus 90 ~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 169 (288)
T smart00829 90 LTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGIPDDHIFSSRDLSFADEILR 169 (288)
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCChhheeeCCCccHHHHHHH
Confidence 4678888788889999999999999999999999999999999999876542 23345566666
Q ss_pred HcCC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch---HHHHHHH
Q 041355 65 WFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY---YHLYLKF 140 (180)
Q Consensus 65 ~~~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 140 (180)
..++ ++|.++|++|+......+++++++|+++.++...... ....+... +.+++++.+...... +......
T Consensus 170 ~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (288)
T smart00829 170 ATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRD----NSQLGMAP-FRRNVSYHAVDLDALEEGPDRIREL 244 (288)
T ss_pred HhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCcc----ccccchhh-hcCCceEEEEEHHHhhcChHHHHHH
Confidence 6665 8999999999878888999999999999998643210 11222222 455666666554321 1123345
Q ss_pred HHHHHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 141 LELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 141 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+..+.+++.++.+.+...+.+++++++++++.++.+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (288)
T smart00829 245 LAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGK 281 (288)
T ss_pred HHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCC
Confidence 6778889999998876667899999999999988764
No 98
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.74 E-value=6.5e-16 Score=115.63 Aligned_cols=171 Identities=22% Similarity=0.296 Sum_probs=132.7
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
+++|+++.+...+.++++++|+|++|++|++++++++..|++++++++++++ ........+.+.+
T Consensus 130 ~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 209 (328)
T cd08268 130 LTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRIT 209 (328)
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHh
Confidence 5688888778889999999999999999999999999999999998876532 2234455566666
Q ss_pred CC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch---HHHHHHHHH
Q 041355 67 PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY---YHLYLKFLE 142 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 142 (180)
.+ ++|++++|+++.....++.+++++|+++.++..... .........+.+++++.+...... +......++
T Consensus 210 ~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (328)
T cd08268 210 GGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGALSGE-----PTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIA 284 (328)
T ss_pred CCCCceEEEECCchHhHHHHHHhhccCCEEEEEEeCCCC-----CCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHH
Confidence 55 899999999988888889999999999999765421 112333335778888877765421 234456777
Q ss_pred HHHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 143 LVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 143 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
.+.+++.++.+.+.....+++++++++++.++++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (328)
T cd08268 285 FILDGLASGALKPVVDRVFPFDDIVEAHRYLESGQ 319 (328)
T ss_pred HHHHHHHCCCCcCCcccEEcHHHHHHHHHHHHcCC
Confidence 78888889999887778899999999999887653
No 99
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.74 E-value=7.1e-16 Score=116.25 Aligned_cols=168 Identities=17% Similarity=0.100 Sum_probs=125.8
Q ss_pred chHHHHHHHHcCCCC-----CCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCCCC--------------CcchHHHH
Q 041355 2 LIVGNLIILVCSPKK-----GEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEK--------------EEPDLDAA 61 (180)
Q Consensus 2 l~a~~~l~~~~~~~~-----g~~vlI~Ga~g~vG~~~iqlak~~g-~~vi~~~~~~~~--------------~~~~~~~~ 61 (180)
++||+++.+..++.+ |++|+|+|++|++|++++|+++.+| ++|+++++++++ ...++...
T Consensus 130 ~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 209 (336)
T cd08252 130 LTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQDLAEQ 209 (336)
T ss_pred HHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCccHHHH
Confidence 467888878888887 9999999999999999999999999 899999887654 11245455
Q ss_pred HHhHcCCCccEEEeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch-------
Q 041355 62 LKRWFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY------- 133 (180)
Q Consensus 62 ~~~~~~~~~d~~~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 133 (180)
++...++++|+++||+|+ ..+..++++++++|+++.++... ...+...+..+++++.+......
T Consensus 210 i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (336)
T cd08252 210 LEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--------EPLDLGPLKSKSASFHWEFMFTRSMFQTPD 281 (336)
T ss_pred HHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--------CcccchhhhcccceEEEEEeeccccccccc
Confidence 554433489999999995 58889999999999999997532 12233334456777776544221
Q ss_pred HHHHHHHHHHHHHHHHCCCccceee---eecchhhHHHHHHHHHhhh
Q 041355 134 YHLYLKFLELVIPAIREGKMVYVED---IAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 134 ~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~a~~~l~~~~ 177 (180)
.......+.++.+++.++.+.+.+. ..++++++++|++.++++.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~ 328 (336)
T cd08252 282 MIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGK 328 (336)
T ss_pred hhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCC
Confidence 1123457888999999999998643 3479999999999988764
No 100
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.74 E-value=3e-16 Score=118.04 Aligned_cols=171 Identities=20% Similarity=0.224 Sum_probs=121.1
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------------CcchHHHHHHhHcC
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------------EEPDLDAALKRWFP 67 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------------~~~~~~~~~~~~~~ 67 (180)
++||+++.+..++.+|++++|+|++|++|++++|+++..|++|+++++ +++ ...++... ....
T Consensus 125 ~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~ 201 (331)
T cd08273 125 VTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALRELGATPIDYRTKDWLPA--MLTP 201 (331)
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHHHcCCeEEcCCCcchhhh--hccC
Confidence 578888877788999999999999999999999999999999998886 432 11122222 2233
Q ss_pred CCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccch----------HHH--hhcCcEEEeeeccc--h
Q 041355 68 QGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNL----------EQL--IGKRIRLEGFLAGD--Y 133 (180)
Q Consensus 68 ~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~----------~~~--~~~~~~~~~~~~~~--~ 133 (180)
+++|.++||+|+..+...+++++++|+++.++........ ....+. ... ..+.+++.+..... .
T Consensus 202 ~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (331)
T cd08273 202 GGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQG--RRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAED 279 (331)
T ss_pred CCceEEEECCchHHHHHHHHHhcCCCEEEEEccCCCCCCc--cccccchhhhhhhhhhhcceeccceeEEEeechhcccC
Confidence 4799999999988888899999999999999865432110 000100 011 12233333322211 1
Q ss_pred HHHHHHHHHHHHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 134 YHLYLKFLELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 134 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+....+.+..+++++.++.+++.+.+++++++++++++.+.++.
T Consensus 280 p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~ 323 (331)
T cd08273 280 PKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGK 323 (331)
T ss_pred HHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCC
Confidence 22345678889999999999988778899999999999887653
No 101
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.74 E-value=7.7e-16 Score=115.22 Aligned_cols=164 Identities=23% Similarity=0.250 Sum_probs=127.6
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++||+++.+..++++|++++|+|+++++|++++++++..|++|++++++ ++ ... +...++..+
T Consensus 130 ~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~ 207 (326)
T cd08272 130 ITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFARSLGADPIIYYRET-VVEYVAEHT 207 (326)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHHHcCCCEEEecchh-HHHHHHHhc
Confidence 4678888888999999999999999999999999999999999988876 43 112 556677777
Q ss_pred CC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccc------hHHHHHH
Q 041355 67 PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGD------YYHLYLK 139 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 139 (180)
.+ ++|+++||+++......+.+++++|+++.++.... ........+++++.+..... .+.....
T Consensus 208 ~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (326)
T cd08272 208 GGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGAT---------HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGE 278 (326)
T ss_pred CCCCCcEEEECCChHHHHHHHHHhccCCEEEEEecCCc---------cchhhHhhhcceEEEEEcccccccccchhhHHH
Confidence 66 89999999998888888999999999999976420 11112235667766665321 1223456
Q ss_pred HHHHHHHHHHCCCccceee-eecchhhHHHHHHHHHhh
Q 041355 140 FLELVIPAIREGKMVYVED-IAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 140 ~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~a~~~l~~~ 176 (180)
.+..+.+++.++.+++.++ +.+++++++++++.++++
T Consensus 279 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 316 (326)
T cd08272 279 ILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESG 316 (326)
T ss_pred HHHHHHHHHHCCCcccccccceecHHHHHHHHHHHHcC
Confidence 7888999999999988766 889999999999988764
No 102
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.73 E-value=2.9e-16 Score=118.75 Aligned_cols=163 Identities=17% Similarity=0.165 Sum_probs=120.1
Q ss_pred chHHHHHHHHcCC----------CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------Ccc
Q 041355 2 LIVGNLIILVCSP----------KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEP 56 (180)
Q Consensus 2 l~a~~~l~~~~~~----------~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~ 56 (180)
++||+++.+..++ .++++++|+|++|++|++++|+|+.+|++|++++++ ++ ...
T Consensus 130 ~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~ 208 (339)
T cd08249 130 VTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTASP-KNFDLVKSLGADAVFDYHDP 208 (339)
T ss_pred HHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEECc-ccHHHHHhcCCCEEEECCCc
Confidence 5788888666544 789999999999999999999999999999988754 33 234
Q ss_pred hHHHHHHhHcCCCccEEEeCCCh-hhHHHHHHhhcc--CCEEEEEeccccccCCCCccccchHHHhhcCcEE---Eeeec
Q 041355 57 DLDAALKRWFPQGIDIYFENVGG-KMLDAVLLNMRL--RGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRL---EGFLA 130 (180)
Q Consensus 57 ~~~~~~~~~~~~~~d~~~d~~g~-~~~~~~~~~l~~--~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 130 (180)
++.+.+++.+++++|+++|++|+ ..+...++++++ +|+++.++...... .+....+. .....
T Consensus 209 ~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~------------~~~~~~~~~~~~~~~~ 276 (339)
T cd08249 209 DVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET------------EPRKGVKVKFVLGYTV 276 (339)
T ss_pred hHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc------------cCCCCceEEEEEeeee
Confidence 56666777666689999999998 688999999999 99999997654210 01111222 12221
Q ss_pred c----chHHHHHHHHHHHHHHHHCCCccceeeeecc--hhhHHHHHHHHHhhh
Q 041355 131 G----DYYHLYLKFLELVIPAIREGKMVYVEDIAEG--LEKISRNCYTLKWRV 177 (180)
Q Consensus 131 ~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~a~~~l~~~~ 177 (180)
. .........+..+.+++.++.+.+....+++ ++++++|++.++.+.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~ 329 (339)
T cd08249 277 FGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGK 329 (339)
T ss_pred cccccccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCC
Confidence 1 1122234567788999999999987556677 999999999988654
No 103
>PRK10083 putative oxidoreductase; Provisional
Probab=99.73 E-value=4.9e-16 Score=117.36 Aligned_cols=158 Identities=14% Similarity=0.139 Sum_probs=115.6
Q ss_pred hHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHH-cCCE-EEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 3 IVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKL-AGCY-VVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 3 ~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~-~g~~-vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++|+ +.+..++++|++|+|+| +|++|++++|+|+. +|++ ++++++++++ +++++.+.+..
T Consensus 148 ~a~~-~~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~- 224 (339)
T PRK10083 148 IAAN-VTGRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEE- 224 (339)
T ss_pred HHHH-HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhc-
Confidence 4564 44778899999999999 79999999999996 6995 6666665443 12233333322
Q ss_pred cCC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
.+ ++|++|||+|+. .+...+++++++|+++.+|.... ....+......+++++.+.... .+.+.+
T Consensus 225 -~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 291 (339)
T PRK10083 225 -KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE------PSEIVQQGITGKELSIFSSRLN------ANKFPV 291 (339)
T ss_pred -CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CceecHHHHhhcceEEEEEecC------hhhHHH
Confidence 23 578999999954 88999999999999999986542 1122334444566666655431 345788
Q ss_pred HHHHHHCCCccc--eeeeecchhhHHHHHHHHHhh
Q 041355 144 VIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 144 ~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~ 176 (180)
+++++.++.+++ .++++++++++++|++.++++
T Consensus 292 ~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~ 326 (339)
T PRK10083 292 VIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKD 326 (339)
T ss_pred HHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcC
Confidence 999999999987 477899999999999998754
No 104
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.72 E-value=1.3e-15 Score=115.01 Aligned_cols=161 Identities=20% Similarity=0.223 Sum_probs=122.0
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCCCC---------------Cc-chHHHHHHh
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKL-AGCYVVGSAGSKEK---------------EE-PDLDAALKR 64 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~-~g~~vi~~~~~~~~---------------~~-~~~~~~~~~ 64 (180)
++||+++ +..++++|++|+|+| +|++|++++|+|+. .|++|+++++++++ .. .++...+++
T Consensus 149 ~ta~~~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~ 226 (338)
T PRK09422 149 VTTYKAI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQE 226 (338)
T ss_pred hHHHHHH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHH
Confidence 5788888 778899999999999 79999999999998 49999999887654 11 344555666
Q ss_pred HcCCCcc-EEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 65 WFPQGID-IYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 65 ~~~~~~d-~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
..+ ++| +++++.++..+..++++++++|+++.++.... ....+......+..++.+..... .+.++.
T Consensus 227 ~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 294 (338)
T PRK09422 227 KTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE------SMDLSIPRLVLDGIEVVGSLVGT-----RQDLEE 294 (338)
T ss_pred hcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC------CceecHHHHhhcCcEEEEecCCC-----HHHHHH
Confidence 555 688 45565666688999999999999999986431 11234455566777776654332 345778
Q ss_pred HHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 144 VIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 144 ~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+.+++.+|.+.+.+. .++++++++|++.++++.
T Consensus 295 ~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~ 327 (338)
T PRK09422 295 AFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGK 327 (338)
T ss_pred HHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCC
Confidence 899999999987765 579999999999988764
No 105
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=99.72 E-value=8.1e-16 Score=117.72 Aligned_cols=167 Identities=17% Similarity=0.113 Sum_probs=119.5
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------C--cchHHHHHH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------E--EPDLDAALK 63 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~--~~~~~~~~~ 63 (180)
++||+++.+..++++|++++|+| +|++|++++|+|+.+|+ +|+++++++++ . ++++...++
T Consensus 176 ~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~ 254 (373)
T cd08299 176 STGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLT 254 (373)
T ss_pred HHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccccchhHHHHHH
Confidence 57888887888999999999996 79999999999999999 79998876544 1 112455566
Q ss_pred hHcCCCccEEEeCCChh-hHHHHHHhh-ccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHH
Q 041355 64 RWFPQGIDIYFENVGGK-MLDAVLLNM-RLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFL 141 (180)
Q Consensus 64 ~~~~~~~d~~~d~~g~~-~~~~~~~~l-~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (180)
+.+++++|.++||+|+. .+..++..+ +++|+++.+|..... .....+.. .+.++.++.++....+. .+..+
T Consensus 255 ~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~~-~~~~~~~i~~~~~~~~~--~~~~~ 327 (373)
T cd08299 255 EMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS----QNLSINPM-LLLTGRTWKGAVFGGWK--SKDSV 327 (373)
T ss_pred HHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC----ceeecCHH-HHhcCCeEEEEEecCCc--cHHHH
Confidence 66656899999999964 667766655 579999999875421 11223332 23456788877664431 12334
Q ss_pred HHHHHHHHCCCc--cceeeeecchhhHHHHHHHHHhh
Q 041355 142 ELVIPAIREGKM--VYVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 142 ~~~~~~~~~g~~--~~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
.++++.+.++.+ ++.++++|+++++++|++.++++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~ 364 (373)
T cd08299 328 PKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSG 364 (373)
T ss_pred HHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCC
Confidence 456666666654 44678999999999999987764
No 106
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.72 E-value=2.8e-16 Score=117.72 Aligned_cols=155 Identities=22% Similarity=0.204 Sum_probs=115.3
Q ss_pred HHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHH--------HHHhHcCC-CccEEEe
Q 041355 5 GNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDA--------ALKRWFPQ-GIDIYFE 75 (180)
Q Consensus 5 ~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~--------~~~~~~~~-~~d~~~d 75 (180)
++.+.+..++++|++|+|+| +|++|++++|+|+.+|++|+++++++++ .++.. ...+.+.+ ++|+++|
T Consensus 144 ~~~~~~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~vid 220 (319)
T cd08242 144 ALEILEQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEK--LALARRLGVETVLPDEAESEGGGFDVVVE 220 (319)
T ss_pred HHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHH--HHHHHHcCCcEEeCccccccCCCCCEEEE
Confidence 33444778899999999997 8999999999999999999888876543 00100 01111333 8999999
Q ss_pred CCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHHHHHHCCCc-
Q 041355 76 NVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIPAIREGKM- 153 (180)
Q Consensus 76 ~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~- 153 (180)
|+|+. .+...+++++++|+++..+.... ....+...+..++.++.+..... ++++.+++.++.+
T Consensus 221 ~~g~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~~~l~ 286 (319)
T cd08242 221 ATGSPSGLELALRLVRPRGTVVLKSTYAG------PASFDLTKAVVNEITLVGSRCGP--------FAPALRLLRKGLVD 286 (319)
T ss_pred CCCChHHHHHHHHHhhcCCEEEEEcccCC------CCccCHHHheecceEEEEEeccc--------HHHHHHHHHcCCCC
Confidence 99875 78888999999999998654321 12344555667777777765432 5678899999999
Q ss_pred -cceeeeecchhhHHHHHHHHHhh
Q 041355 154 -VYVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 154 -~~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
.+.+.++|+++++++|++.++++
T Consensus 287 ~~~~~~~~~~l~~~~~a~~~~~~~ 310 (319)
T cd08242 287 VDPLITAVYPLEEALEAFERAAEP 310 (319)
T ss_pred hhhceEEEEeHHHHHHHHHHHhcC
Confidence 55678999999999999988754
No 107
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.72 E-value=1.3e-16 Score=104.54 Aligned_cols=112 Identities=26% Similarity=0.380 Sum_probs=94.2
Q ss_pred hHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHcCC-CccEEEeCCC-hhhHHHHHHhhc
Q 041355 28 AVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWFPQ-GIDIYFENVG-GKMLDAVLLNMR 90 (180)
Q Consensus 28 ~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~~~-~~d~~~d~~g-~~~~~~~~~~l~ 90 (180)
++|++++|+||++|++|+++++++++ ++.++.+++++.+++ ++|++|||+| .+.++.++.+++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~ 80 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLLR 80 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHEE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHhc
Confidence 68999999999999999999998876 456799999999998 9999999999 569999999999
Q ss_pred cCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHHHHHH
Q 041355 91 LRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIPAIR 149 (180)
Q Consensus 91 ~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (180)
++|+++.+|... ......+...++.+++++.+++... .+.++++++++.
T Consensus 81 ~~G~~v~vg~~~-----~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la 129 (130)
T PF00107_consen 81 PGGRIVVVGVYG-----GDPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLA 129 (130)
T ss_dssp EEEEEEEESSTS-----TSEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH
T ss_pred cCCEEEEEEccC-----CCCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhc
Confidence 999999999876 2345677789999999999999876 233445555443
No 108
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.72 E-value=2.5e-16 Score=115.75 Aligned_cols=167 Identities=23% Similarity=0.192 Sum_probs=119.5
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCCCCC--------cchHHHHHHhHcCC-Ccc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKE--------EPDLDAALKRWFPQ-GID 71 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~-vi~~~~~~~~~--------~~~~~~~~~~~~~~-~~d 71 (180)
++||+++ ...++++|++++|+| +|++|++++|+|+.+|++ |+++++++++. ...........+.+ ++|
T Consensus 84 ~ta~~~~-~~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d 161 (277)
T cd08255 84 ATALNGV-RDAEPRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTADEIGGRGAD 161 (277)
T ss_pred HHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccchhhhcCCCCC
Confidence 5788887 478899999999997 799999999999999998 99988765540 00011011111233 899
Q ss_pred EEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchH-------HHHHHHHHH
Q 041355 72 IYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYY-------HLYLKFLEL 143 (180)
Q Consensus 72 ~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 143 (180)
++|||++.. .+...+++++++|+++.++..... .......+..+.+++.+....... ....+.+++
T Consensus 162 ~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (277)
T cd08255 162 VVIEASGSPSALETALRLLRDRGRVVLVGWYGLK------PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEE 235 (277)
T ss_pred EEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC------ccccHHHHHhccCeEEeecccccccccccccccccccHHH
Confidence 999998854 778889999999999999875431 111112233455566655543210 112356888
Q ss_pred HHHHHHCCCccceeeeecchhhHHHHHHHHHhh
Q 041355 144 VIPAIREGKMVYVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 144 ~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
+.+++.++.+++.+.++++++++++|++.++.+
T Consensus 236 ~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~ 268 (277)
T cd08255 236 ALDLLAEGRLEALITHRVPFEDAPEAYRLLFED 268 (277)
T ss_pred HHHHHHcCCccccccCccCHHHHHHHHHHHHcC
Confidence 999999999988878889999999999998765
No 109
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.72 E-value=1.6e-15 Score=114.63 Aligned_cols=163 Identities=20% Similarity=0.130 Sum_probs=116.2
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEE-EEEeCCCCC---------------CcchHHH---HH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYV-VGSAGSKEK---------------EEPDLDA---AL 62 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~v-i~~~~~~~~---------------~~~~~~~---~~ 62 (180)
++||+++ ...++++|++|+|+| +|++|++++|+|+.+|+++ +++.+++++ +..+... .+
T Consensus 148 ~~a~~~~-~~~~~~~g~~VlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~ 225 (341)
T cd08262 148 AVGLHAV-RRARLTPGEVALVIG-CGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAE 225 (341)
T ss_pred HHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHH
Confidence 5688885 788999999999997 6999999999999999974 444443332 1111111 23
Q ss_pred HhHcCC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHH
Q 041355 63 KRWFPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKF 140 (180)
Q Consensus 63 ~~~~~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (180)
.....+ ++|+++||+|+. .+..++++++++|+++.++..... ........+.+++++.+..... .+.
T Consensus 226 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~-----~~~ 294 (341)
T cd08262 226 LARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMES------DNIEPALAIRKELTLQFSLGYT-----PEE 294 (341)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC------CccCHHHHhhcceEEEEEeccc-----HHH
Confidence 334444 899999999974 778889999999999999865321 1122222344666666443322 235
Q ss_pred HHHHHHHHHCCCccc--eeeeecchhhHHHHHHHHHhhh
Q 041355 141 LELVIPAIREGKMVY--VEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 141 ~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+.++.+++.+|.+.+ .+.++++++++++|++.++++.
T Consensus 295 ~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~ 333 (341)
T cd08262 295 FADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPE 333 (341)
T ss_pred HHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCC
Confidence 778889999999975 4578899999999999988764
No 110
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.71 E-value=2e-15 Score=113.22 Aligned_cols=160 Identities=16% Similarity=0.137 Sum_probs=117.6
Q ss_pred cCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-------------CcchHHHHHHhHcCCCccEEEeCC
Q 041355 12 CSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-------------EEPDLDAALKRWFPQGIDIYFENV 77 (180)
Q Consensus 12 ~~~~-~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-------------~~~~~~~~~~~~~~~~~d~~~d~~ 77 (180)
.... +|++++|+|++|++|++++|+|+.+|++|+++++++++ +..+....++....+++|.++||+
T Consensus 141 ~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 220 (324)
T cd08288 141 HGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRPLQKERWAGAVDTV 220 (324)
T ss_pred cCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhHhhhhhccCcccEEEECC
Confidence 3444 67899999999999999999999999999998877654 111222234445555789999999
Q ss_pred ChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch-HHHHHHHHHHHHHHHHCCCccce
Q 041355 78 GGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYLKFLELVIPAIREGKMVYV 156 (180)
Q Consensus 78 g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~ 156 (180)
++..+...+..++.+|+++.+|..... ....++..++.+++++.+.+.... .....+.+..+.+++.++.+.+.
T Consensus 221 ~~~~~~~~~~~~~~~g~~~~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 295 (324)
T cd08288 221 GGHTLANVLAQTRYGGAVAACGLAGGA-----DLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEAL 295 (324)
T ss_pred cHHHHHHHHHHhcCCCEEEEEEecCCC-----CCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCcccc
Confidence 987777888889999999999875321 112334445578888888764322 12234577788889999988774
Q ss_pred eeeecchhhHHHHHHHHHhhh
Q 041355 157 EDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 157 ~~~~~~~~~~~~a~~~l~~~~ 177 (180)
.+.++++++++|++.++++.
T Consensus 296 -~~~~~~~~~~~a~~~~~~~~ 315 (324)
T cd08288 296 -TREIPLADVPDAAEAILAGQ 315 (324)
T ss_pred -ceeecHHHHHHHHHHHhcCC
Confidence 67899999999999887654
No 111
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.71 E-value=1.8e-15 Score=114.34 Aligned_cols=162 Identities=19% Similarity=0.117 Sum_probs=122.6
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCC--------cc--hHH-HHHHhHcCCCc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKE--------EP--DLD-AALKRWFPQGI 70 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~--------~~--~~~-~~~~~~~~~~~ 70 (180)
++||+++. ...+++|++++|.| .|++|++++|+++.+|++|+++++++++. +. +.. ....+...+++
T Consensus 156 ~ta~~~~~-~~~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~ 233 (337)
T cd05283 156 ITVYSPLK-RNGVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGSL 233 (337)
T ss_pred HHHHHHHH-hcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCCc
Confidence 46788874 45689999999977 89999999999999999999988876540 00 000 01111223489
Q ss_pred cEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHHHHHH
Q 041355 71 DIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIPAIR 149 (180)
Q Consensus 71 d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (180)
|++|||+|.. .....+++++++|+++.++..... ...++..++.+++++.+..... .+.++.+++++.
T Consensus 234 d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~ 302 (337)
T cd05283 234 DLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP------LPVPPFPLIFGRKSVAGSLIGG-----RKETQEMLDFAA 302 (337)
T ss_pred eEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC------CccCHHHHhcCceEEEEecccC-----HHHHHHHHHHHH
Confidence 9999999987 588899999999999999875421 1344555667888888877654 345778889999
Q ss_pred CCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 150 EGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 150 ~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
++++++.+ ++++++++++|++.++++.
T Consensus 303 ~~~l~~~~-~~~~~~~~~~a~~~~~~~~ 329 (337)
T cd05283 303 EHGIKPWV-EVIPMDGINEALERLEKGD 329 (337)
T ss_pred hCCCccce-EEEEHHHHHHHHHHHHcCC
Confidence 99998865 6799999999999988763
No 112
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.71 E-value=1.4e-15 Score=114.95 Aligned_cols=163 Identities=18% Similarity=0.246 Sum_probs=118.8
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~-vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
++|++++ ...+.+|++++|.| +|++|++++|+++.+|++ |+++.+++++ ...++.+.+.+.
T Consensus 149 ~~a~~~~--~~~~~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~ 225 (340)
T TIGR00692 149 GNAVHTV--LAGPISGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADL 225 (340)
T ss_pred HHHHHHH--HccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHh
Confidence 3456655 34568999999976 799999999999999996 8777554332 233556667666
Q ss_pred cCC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchH-HHhhcCcEEEeeeccchHHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLE-QLIGKRIRLEGFLAGDYYHLYLKFLE 142 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (180)
+++ ++|+++||+|++ .+...+++++++|+++.++..... ...+.. .+..+++++.+..... ..+.+.
T Consensus 226 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 295 (340)
T TIGR00692 226 TDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGK------VTIDFTNKVIFKGLTIYGITGRH----MFETWY 295 (340)
T ss_pred cCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCC------cccchhhhhhhcceEEEEEecCC----chhhHH
Confidence 665 899999998864 788899999999999999865321 111122 4556677776654211 124567
Q ss_pred HHHHHHHCCCcc--ceeeeecchhhHHHHHHHHHhhh
Q 041355 143 LVIPAIREGKMV--YVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 143 ~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
++.++++++.++ +.+.+.+++++++++++.++++.
T Consensus 296 ~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~ 332 (340)
T TIGR00692 296 TVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQ 332 (340)
T ss_pred HHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCC
Confidence 889999999987 55678899999999999887653
No 113
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.70 E-value=3.9e-15 Score=112.21 Aligned_cols=161 Identities=21% Similarity=0.234 Sum_probs=118.5
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~-vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
+++++++ +..++++|++|+|+| +|++|++++|+||..|++ |+++.+++++ ...+.... +..
T Consensus 146 ~~a~~~l-~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~ 222 (334)
T cd08234 146 SCAVHGL-DLLGIKPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQ-KED 222 (334)
T ss_pred HHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHH-HHh
Confidence 4677777 778999999999997 699999999999999997 7777766543 11222222 222
Q ss_pred cCCCccEEEeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHH
Q 041355 66 FPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELV 144 (180)
Q Consensus 66 ~~~~~d~~~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (180)
.++++|+++||+|. ..+...+++++++|+++.++..... .....+....+.+++++.+.... ...++++
T Consensus 223 ~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 292 (334)
T cd08234 223 NPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPD----ARVSISPFEIFQKELTIIGSFIN------PYTFPRA 292 (334)
T ss_pred cCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCC----CCcccCHHHHHhCCcEEEEeccC------HHHHHHH
Confidence 23489999999985 4788889999999999999865421 11223334444567777776542 2347788
Q ss_pred HHHHHCCCccc--eeeeecchhhHHHHHHHHHh
Q 041355 145 IPAIREGKMVY--VEDIAEGLEKISRNCYTLKW 175 (180)
Q Consensus 145 ~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~ 175 (180)
.+++.++.+++ .++.++++++++++++.++.
T Consensus 293 ~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~ 325 (334)
T cd08234 293 IALLESGKIDVKGLVSHRLPLEEVPEALEGMRS 325 (334)
T ss_pred HHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc
Confidence 89999999875 35678999999999998876
No 114
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.69 E-value=8.2e-15 Score=110.27 Aligned_cols=174 Identities=24% Similarity=0.304 Sum_probs=127.1
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCCCC---------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEK---------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~-g~~vi~~~~~~~~---------------~~~~~~~~~~~~ 65 (180)
+++|+++.+..++++|++++|+|++|++|++++|+++.. +..++...+ +++ ...++...++..
T Consensus 124 ~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 202 (337)
T cd08275 124 LTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTAS-ASKHEALKENGVTHVIDYRTQDYVEEVKKI 202 (337)
T ss_pred HHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEeCC-HHHHHHHHHcCCcEEeeCCCCcHHHHHHHH
Confidence 568888888889999999999999999999999999998 433332221 111 223556667766
Q ss_pred cCCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCC-----------CccccchHHHhhcCcEEEeeeccch-
Q 041355 66 FPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEK-----------PEGVHNLEQLIGKRIRLEGFLAGDY- 133 (180)
Q Consensus 66 ~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~- 133 (180)
+++++|+++||+|+.....++++++++|+++.+|.....+... ......+...+.+++++.++.....
T Consensus 203 ~~~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (337)
T cd08275 203 SPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLF 282 (337)
T ss_pred hCCCceEEEECCcHHHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhh
Confidence 6568999999999888888999999999999998654321000 0011222455778888888765321
Q ss_pred --HHHHHHHHHHHHHHHHCCCccceeeeecchhhHHHHHHHHHhh
Q 041355 134 --YHLYLKFLELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 134 --~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
.......+.++.+++.++.+.+..+..+++++++++++.+.++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (337)
T cd08275 283 EERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSR 327 (337)
T ss_pred hChHHHHHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcC
Confidence 1122346788889999999988877889999999999988765
No 115
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.69 E-value=5.6e-15 Score=109.68 Aligned_cols=157 Identities=21% Similarity=0.224 Sum_probs=120.6
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
+++++++.+..++.+|++++|+|++|++|++++++++..|++|+++++++ + ...++.. ..
T Consensus 130 ~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~----~~ 204 (309)
T cd05289 130 LTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLRSLGADEVIDYTKGDFER----AA 204 (309)
T ss_pred HHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhh----cc
Confidence 46788887777799999999999889999999999999999999887755 2 1111111 22
Q ss_pred CC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHH
Q 041355 67 PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVI 145 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (180)
.+ ++|.++||+|+.....++++++++|+++.++..... .. ..+.++.++........ ...+.++.
T Consensus 205 ~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~----~~~~~~~~~~~~~~~~~----~~~~~~~~ 270 (309)
T cd05289 205 APGGVDAVLDTVGGETLARSLALVKPGGRLVSIAGPPPA------EQ----AAKRRGVRAGFVFVEPD----GEQLAELA 270 (309)
T ss_pred CCCCceEEEECCchHHHHHHHHHHhcCcEEEEEcCCCcc------hh----hhhhccceEEEEEeccc----HHHHHHHH
Confidence 33 799999999988888999999999999999764310 00 33445666665554331 45788899
Q ss_pred HHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 146 PAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++.++.+.+.+++.+++++++++++.+..+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 302 (309)
T cd05289 271 ELVEAGKLRPVVDRVFPLEDAAEAHERLESGH 302 (309)
T ss_pred HHHHCCCEEEeeccEEcHHHHHHHHHHHHhCC
Confidence 99999999888888999999999999887654
No 116
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.68 E-value=6.2e-15 Score=112.52 Aligned_cols=161 Identities=17% Similarity=0.197 Sum_probs=118.3
Q ss_pred hHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCCCC-----------------CcchHHHHHHh
Q 041355 3 IVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK-----------------EEPDLDAALKR 64 (180)
Q Consensus 3 ~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~-vi~~~~~~~~-----------------~~~~~~~~~~~ 64 (180)
++|+++ +..++.+|++++|+| +|++|++++|+|+.+|++ |+++.+++++ ..+++.+.+.+
T Consensus 169 ~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 246 (364)
T PLN02702 169 VGVHAC-RRANIGPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEE 246 (364)
T ss_pred HHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHH
Confidence 466776 778899999999997 799999999999999995 5555554332 11344455544
Q ss_pred H---cCCCccEEEeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHH
Q 041355 65 W---FPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKF 140 (180)
Q Consensus 65 ~---~~~~~d~~~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (180)
. .++++|++|||+|+ ..+..++++++++|+++.++.... ...........+++++.++.... ..
T Consensus 247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~~~~~~~------~~ 314 (364)
T PLN02702 247 IQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN------EMTVPLTPAAAREVDVVGVFRYR------NT 314 (364)
T ss_pred HhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC------CCcccHHHHHhCccEEEEeccCh------HH
Confidence 3 23489999999994 588999999999999999986431 11234456677888888765422 34
Q ss_pred HHHHHHHHHCCCcc--ceeeeecch--hhHHHHHHHHHhhh
Q 041355 141 LELVIPAIREGKMV--YVEDIAEGL--EKISRNCYTLKWRV 177 (180)
Q Consensus 141 ~~~~~~~~~~g~~~--~~~~~~~~~--~~~~~a~~~l~~~~ 177 (180)
++.+++++.++.+. +.++++|++ +++++|++.++++.
T Consensus 315 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~ 355 (364)
T PLN02702 315 WPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGG 355 (364)
T ss_pred HHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCC
Confidence 67788999999885 456777554 89999999887653
No 117
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.68 E-value=6e-15 Score=111.62 Aligned_cols=160 Identities=18% Similarity=0.223 Sum_probs=116.5
Q ss_pred hHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 3 IVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 3 ~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++++++. ...++|++|+|.| +|++|++++|+++.+|+ +|+++.+++++ ...++. .+++..
T Consensus 152 ~a~~~~~--~~~~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~ 227 (341)
T cd05281 152 NAVHTVL--AGDVSGKSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVV-EVKSVT 227 (341)
T ss_pred HHHHHHH--hcCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHH-HHHHHc
Confidence 4555553 3457899999987 69999999999999999 78888555433 223455 666666
Q ss_pred CC-CccEEEeCCChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccc-hHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 67 PQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHN-LEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
++ ++|++|||+|+. ....++++|+++|+++.++..... ...+ ......+++.+.+..... ..+.+.+
T Consensus 228 ~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 297 (341)
T cd05281 228 DGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGP------VDIDLNNLVIFKGLTVQGITGRK----MFETWYQ 297 (341)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC------cccccchhhhccceEEEEEecCC----cchhHHH
Confidence 65 899999999865 778889999999999998764321 1111 123555677776655322 1234677
Q ss_pred HHHHHHCCCcc--ceeeeecchhhHHHHHHHHHhh
Q 041355 144 VIPAIREGKMV--YVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 144 ~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
+.+++.++.+. +.+..+++++++++|++.++++
T Consensus 298 ~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~ 332 (341)
T cd05281 298 VSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSG 332 (341)
T ss_pred HHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcC
Confidence 88999999886 4566789999999999998765
No 118
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.67 E-value=1.8e-14 Score=107.88 Aligned_cols=165 Identities=18% Similarity=0.227 Sum_probs=121.5
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++|++++.+..++++|++++|+|+++++|++++++++..|++|+++.+ +++ ...++...+++..
T Consensus 127 ~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 205 (325)
T cd08271 127 LTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTCS-KRNFEYVKSLGADHVIDYNDEDVCERIKEIT 205 (325)
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEEc-HHHHHHHHHcCCcEEecCCCccHHHHHHHHc
Confidence 467888878888999999999998899999999999999999887763 322 2224555677666
Q ss_pred CC-CccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccch--------HHHH
Q 041355 67 PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY--------YHLY 137 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 137 (180)
.+ ++|.+++|+++......+++++++|+++.++..... . . ...+.+.+.+........ ....
T Consensus 206 ~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-------~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (325)
T cd08271 206 GGRGVDAVLDTVGGETAAALAPTLAFNGHLVCIQGRPDA-------S-P-DPPFTRALSVHEVALGAAHDHGDPAAWQDL 276 (325)
T ss_pred CCCCCcEEEECCCcHhHHHHHHhhccCCEEEEEcCCCCC-------c-c-hhHHhhcceEEEEEecccccccchhhHHHH
Confidence 65 899999999988777789999999999998643321 0 1 112233344333322111 1234
Q ss_pred HHHHHHHHHHHHCCCccceeeeecchhhHHHHHHHHHhh
Q 041355 138 LKFLELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 138 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
++.+.++.+++.++.+.+...+.++++++.++++.+.++
T Consensus 277 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~ 315 (325)
T cd08271 277 RYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRALKDR 315 (325)
T ss_pred HHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHHHHHcC
Confidence 556788899999999988766889999999999988765
No 119
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.67 E-value=9.3e-15 Score=110.56 Aligned_cols=152 Identities=18% Similarity=0.246 Sum_probs=113.8
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------CcchHHHHHHhHcCC-CccEEEeC
Q 041355 14 PKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EEPDLDAALKRWFPQ-GIDIYFEN 76 (180)
Q Consensus 14 ~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~~~~~~~~~~~~~~-~~d~~~d~ 76 (180)
..+|++|+|.| +|++|++++|+|+.+|+ .|+++.+++++ ++.++.+.+++.+.+ ++|++|||
T Consensus 161 ~~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~ 239 (341)
T PRK05396 161 DLVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEM 239 (341)
T ss_pred CCCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCCCEEEEC
Confidence 46899999977 79999999999999999 67777655432 234566667777665 89999999
Q ss_pred CChh-hHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHHHHHHCC-Ccc
Q 041355 77 VGGK-MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIPAIREG-KMV 154 (180)
Q Consensus 77 ~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~ 154 (180)
.|+. .+..++.+++++|+++.++..... ...+...+..+++++.++..... .+.+..+.+++.++ ++.
T Consensus 240 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~ 309 (341)
T PRK05396 240 SGAPSAFRQMLDNMNHGGRIAMLGIPPGD------MAIDWNKVIFKGLTIKGIYGREM----FETWYKMSALLQSGLDLS 309 (341)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEecCCCC------CcccHHHHhhcceEEEEEEccCc----cchHHHHHHHHHcCCChh
Confidence 9865 788899999999999999865421 12234566677777777643221 23355677888888 566
Q ss_pred ceeeeecchhhHHHHHHHHHhh
Q 041355 155 YVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 155 ~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
+.+.++++++++++|++.++++
T Consensus 310 ~~~~~~~~l~~~~~a~~~~~~~ 331 (341)
T PRK05396 310 PIITHRFPIDDFQKGFEAMRSG 331 (341)
T ss_pred HheEEEEeHHHHHHHHHHHhcC
Confidence 6677889999999999988765
No 120
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.67 E-value=4e-15 Score=113.03 Aligned_cols=175 Identities=17% Similarity=0.113 Sum_probs=114.3
Q ss_pred chHHHHHHHHc-CCCCCCEEEEecCCchHHHHHHHHHHHc-CC-EEEEEeCCCCC--------------Ccch---HHHH
Q 041355 2 LIVGNLIILVC-SPKKGEYVYVSAASGAVGQLVGQFAKLA-GC-YVVGSAGSKEK--------------EEPD---LDAA 61 (180)
Q Consensus 2 l~a~~~l~~~~-~~~~g~~vlI~Ga~g~vG~~~iqlak~~-g~-~vi~~~~~~~~--------------~~~~---~~~~ 61 (180)
++||+++.+.. ++++|++++|+|+++++|++++|+|+.+ +. .++++.+.++. .+.+ +...
T Consensus 136 ~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~ 215 (352)
T cd08247 136 GTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKP 215 (352)
T ss_pred HHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeChhHHHHHHHhCCCEEEecCCCcccchHHH
Confidence 47888887766 7999999999999999999999999987 55 67776654321 1222 3334
Q ss_pred HHhH-c-CCCccEEEeCCCh-hhHHHHHHhhc---cCCEEEEEeccccccCCCCc------cccchHHHhhcCcEEEeee
Q 041355 62 LKRW-F-PQGIDIYFENVGG-KMLDAVLLNMR---LRGRIAVSSIISQYNLEKPE------GVHNLEQLIGKRIRLEGFL 129 (180)
Q Consensus 62 ~~~~-~-~~~~d~~~d~~g~-~~~~~~~~~l~---~~G~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 129 (180)
+.+. + ++++|++|||+|+ .....++++++ ++|+++.++.....+..... ..... ..+.+...+....
T Consensus 216 ~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 294 (352)
T cd08247 216 VLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANA-RKLFGSLGLWSYN 294 (352)
T ss_pred HHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhh-hhhhhhhcCCCcc
Confidence 4333 4 2389999999998 47788899999 99999987532211000000 00000 1112222222111
Q ss_pred ccch-HHHHHHHHHHHHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 130 AGDY-YHLYLKFLELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 130 ~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
.... .....+.+..+.+++.++.+++.+.++++++++++|++.++++.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~ 343 (352)
T cd08247 295 YQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNR 343 (352)
T ss_pred eEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCC
Confidence 1100 00012567788899999999988778999999999999988653
No 121
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.67 E-value=2.6e-15 Score=113.79 Aligned_cols=170 Identities=18% Similarity=0.171 Sum_probs=115.0
Q ss_pred chHHHHHHHHcCCCC----CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------------CcchHHHHHH
Q 041355 2 LIVGNLIILVCSPKK----GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------------EEPDLDAALK 63 (180)
Q Consensus 2 l~a~~~l~~~~~~~~----g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------------~~~~~~~~~~ 63 (180)
++||+++.+...+.+ |++++|+|++|++|++++++++.+|++|+++.+++.. ...++...+.
T Consensus 144 ~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~ 223 (350)
T cd08248 144 LTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELT 223 (350)
T ss_pred HHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCcchHHHHHHhCCceEEECCChhHHHHHH
Confidence 567888877777754 9999999999999999999999999999888765321 1112333332
Q ss_pred hHcCCCccEEEeCCChhhHHHHHHhhccCCEEEEEeccccccCCC-Cc--cccc-hHHHhh-------cCcEEEeeeccc
Q 041355 64 RWFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVSSIISQYNLEK-PE--GVHN-LEQLIG-------KRIRLEGFLAGD 132 (180)
Q Consensus 64 ~~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~-~~--~~~~-~~~~~~-------~~~~~~~~~~~~ 132 (180)
. .+++|+++||+|+.....++++++++|+++.++......... .. .... ...+.. +.....+....
T Consensus 224 ~--~~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 300 (350)
T cd08248 224 E--RGKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFS- 300 (350)
T ss_pred h--cCCCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEEC-
Confidence 2 137999999999888899999999999999997543211000 00 0000 000000 00001011111
Q ss_pred hHHHHHHHHHHHHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 133 YYHLYLKFLELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
.....+..+++++.+|.+.+.+++++++++++++++.+.++.
T Consensus 301 ---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~ 342 (350)
T cd08248 301 ---PSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGH 342 (350)
T ss_pred ---CCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCC
Confidence 124568889999999999888888999999999999887653
No 122
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.66 E-value=2.1e-14 Score=107.20 Aligned_cols=139 Identities=24% Similarity=0.319 Sum_probs=107.6
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC----------------CcchHHHHHHhH
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----------------EEPDLDAALKRW 65 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~----------------~~~~~~~~~~~~ 65 (180)
++||+++....++++|++|+|.| +|++|++++|+|+..|++|++++.+.+. ...++...+.+.
T Consensus 150 ~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~ 228 (306)
T cd08258 150 AVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAVNGGEEDLAELVNEI 228 (306)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCcccCCCcCCHHHHHHHH
Confidence 56889988888999999999976 7999999999999999998877443221 123455666666
Q ss_pred cCC-CccEEEeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHH
Q 041355 66 FPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLEL 143 (180)
Q Consensus 66 ~~~-~~d~~~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (180)
.++ ++|+++||+|+ ..+...+++++++|+++.++.... ....++...++.+++++.|++... ++.+++
T Consensus 229 ~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~ 298 (306)
T cd08258 229 TDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGP-----LAASIDVERIIQKELSVIGSRSST-----PASWET 298 (306)
T ss_pred cCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC-----CCcccCHHHHhhcCcEEEEEecCc-----hHhHHH
Confidence 665 89999999975 478888999999999999987542 123445566778999999998865 345777
Q ss_pred HHHHHHCC
Q 041355 144 VIPAIREG 151 (180)
Q Consensus 144 ~~~~~~~g 151 (180)
+++++++|
T Consensus 299 ~~~~~~~~ 306 (306)
T cd08258 299 ALRLLASG 306 (306)
T ss_pred HHHHHhcC
Confidence 88887764
No 123
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.65 E-value=1.9e-14 Score=108.71 Aligned_cols=159 Identities=18% Similarity=0.207 Sum_probs=115.8
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC-------------CcchHHHHHHhHcC
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK-------------EEPDLDAALKRWFP 67 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~-------------~~~~~~~~~~~~~~ 67 (180)
++||+++.+...+ +|++|+|.| +|++|++++|+|+.+|+ .|+++++++++ +..+ ..+.+...
T Consensus 152 ~~a~~~l~~~~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~--~~~~~~~~ 227 (339)
T cd08232 152 AVALHAVNRAGDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR--DPLAAYAA 227 (339)
T ss_pred HHHHHHHHhcCCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--hhhhhhhc
Confidence 5788888665556 999999977 79999999999999999 78888776543 0000 00222222
Q ss_pred --CCccEEEeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHH
Q 041355 68 --QGIDIYFENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELV 144 (180)
Q Consensus 68 --~~~d~~~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (180)
+++|+++||+|+ ..+...+++|+++|+++.++.... ....++...+.+++++.+.... ...++++
T Consensus 228 ~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 295 (339)
T cd08232 228 DKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGG------PVPLPLNALVAKELDLRGSFRF------DDEFAEA 295 (339)
T ss_pred cCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccCcHHHHhhcceEEEEEecC------HHHHHHH
Confidence 369999999995 478889999999999999975331 1122334445677777666532 2357788
Q ss_pred HHHHHCCCccc--eeeeecchhhHHHHHHHHHhh
Q 041355 145 IPAIREGKMVY--VEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 145 ~~~~~~g~~~~--~~~~~~~~~~~~~a~~~l~~~ 176 (180)
++++.++.+++ .+.++++++++++|++.+..+
T Consensus 296 ~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~ 329 (339)
T cd08232 296 VRLLAAGRIDVRPLITAVFPLEEAAEAFALAADR 329 (339)
T ss_pred HHHHHcCCCCchhheeEEecHHHHHHHHHHHHhC
Confidence 89999998864 467889999999999988754
No 124
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.65 E-value=2.9e-14 Score=107.30 Aligned_cols=158 Identities=22% Similarity=0.192 Sum_probs=117.7
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++||+++.. .++++|++|+|+| +|++|++++++|+..|++|+++++++++ ...+. ... .
T Consensus 149 ~ta~~~l~~-~~~~~~~~vlI~g-~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~-~ 222 (330)
T cd08245 149 ITVYSALRD-AGPRPGERVAVLG-IGGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELD---EQA-A 222 (330)
T ss_pred HHHHHHHHh-hCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcch---HHh-c
Confidence 568888844 7899999999997 6889999999999999999998887654 00011 111 2
Q ss_pred CCCccEEEeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHH
Q 041355 67 PQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVI 145 (180)
Q Consensus 67 ~~~~d~~~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (180)
.+++|+++||++. .....++++++++|+++.++..... ....+...+..++.++.+..... ...+++++
T Consensus 223 ~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 292 (330)
T cd08245 223 AGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESP-----PFSPDIFPLIMKRQSIAGSTHGG-----RADLQEAL 292 (330)
T ss_pred cCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCC-----ccccchHHHHhCCCEEEEeccCC-----HHHHHHHH
Confidence 2479999999875 4788889999999999999764321 11122344666777777776543 34677788
Q ss_pred HHHHCCCccceeeeecchhhHHHHHHHHHhh
Q 041355 146 PAIREGKMVYVEDIAEGLEKISRNCYTLKWR 176 (180)
Q Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~ 176 (180)
+++.++.+.+ ..+++++++++++++.++++
T Consensus 293 ~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~ 322 (330)
T cd08245 293 DFAAEGKVKP-MIETFPLDQANEAYERMEKG 322 (330)
T ss_pred HHHHcCCCcc-eEEEEcHHHHHHHHHHHHcC
Confidence 9999999986 34679999999999988765
No 125
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.64 E-value=1.4e-14 Score=108.98 Aligned_cols=160 Identities=18% Similarity=0.089 Sum_probs=115.4
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHH--------HHhHcCCCccEE
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAA--------LKRWFPQGIDIY 73 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~--------~~~~~~~~~d~~ 73 (180)
++||+++ +..++++|++++|+| +|++|++++|+++..|++|+++++++++ .+.... .......++|++
T Consensus 154 ~ta~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~vD~v 229 (329)
T cd08298 154 IIGYRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEH--QELARELGADWAGDSDDLPPEPLDAA 229 (329)
T ss_pred HHHHHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHH--HHHHHHhCCcEEeccCccCCCcccEE
Confidence 5788988 889999999999997 8999999999999999999999887653 011110 001122379999
Q ss_pred EeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHHHHHHHHHCCC
Q 041355 74 FENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLELVIPAIREGK 152 (180)
Q Consensus 74 ~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 152 (180)
++|.+. ..+...+++++++|+++.++.... .....+.. .+..+..+.+..... .+.+..+.+++.++.
T Consensus 230 i~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~-~~~~~~~i~~~~~~~-----~~~~~~~~~l~~~~~ 298 (329)
T cd08298 230 IIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----DIPAFDYE-LLWGEKTIRSVANLT-----RQDGEEFLKLAAEIP 298 (329)
T ss_pred EEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----CCCccchh-hhhCceEEEEecCCC-----HHHHHHHHHHHHcCC
Confidence 998664 488889999999999998874221 11112222 234555555554322 345777889999999
Q ss_pred ccceeeeecchhhHHHHHHHHHhhh
Q 041355 153 MVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 153 ~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++. .++++++++++|++.++++.
T Consensus 299 l~~~-~~~~~~~~~~~a~~~~~~~~ 322 (329)
T cd08298 299 IKPE-VETYPLEEANEALQDLKEGR 322 (329)
T ss_pred CCce-EEEEeHHHHHHHHHHHHcCC
Confidence 9875 57899999999999988753
No 126
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.63 E-value=4.6e-14 Score=105.44 Aligned_cols=164 Identities=26% Similarity=0.188 Sum_probs=112.4
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++||+++.+..++++|++++|+|++|++|++++++++..|++|++++++ ++ ...++. +..+
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~---~~~~ 204 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVRSLGADEVIDYTTEDFV---ALTA 204 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHHHcCCCEeecCCCCCcc---hhcc
Confidence 4688888777779999999999988999999999999999999988765 22 111111 2233
Q ss_pred CC-CccEEEeCCChh--hHHHHHHhhccCCEEEEEeccccccCCCCccccc--hHHHhhcCcEEEeeeccchHHHHHHHH
Q 041355 67 PQ-GIDIYFENVGGK--MLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHN--LEQLIGKRIRLEGFLAGDYYHLYLKFL 141 (180)
Q Consensus 67 ~~-~~d~~~d~~g~~--~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (180)
.+ ++|+++||+|+. .....+..++++|+++.++...... ..... ..........+....... ..+.+
T Consensus 205 ~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 276 (319)
T cd08267 205 GGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGL----LLVLLLLPLTLGGGGRRLKFFLAKP----NAEDL 276 (319)
T ss_pred CCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccc----cccccccchhhccccceEEEEEecC----CHHHH
Confidence 33 799999999853 3333333499999999998654211 00100 001111112222222211 14568
Q ss_pred HHHHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 142 ELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
.++.+++.++.+.+.++++++++++++|++.+.++.
T Consensus 277 ~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~ 312 (319)
T cd08267 277 EQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGR 312 (319)
T ss_pred HHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCC
Confidence 888999999999888888999999999999887653
No 127
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.54 E-value=4.3e-13 Score=97.84 Aligned_cols=124 Identities=32% Similarity=0.397 Sum_probs=95.0
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc
Q 041355 2 LIVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF 66 (180)
Q Consensus 2 l~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~ 66 (180)
++||+++.....+++|++|+|+|+++ +|++++|+++..|.+|+++++++++ ...+....+. ..
T Consensus 120 ~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~ 197 (271)
T cd05188 120 ATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELR-LT 197 (271)
T ss_pred HHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHH-Hh
Confidence 57888987777779999999999766 9999999999999999999887543 2223344444 33
Q ss_pred C-CCccEEEeCCCh-hhHHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccc
Q 041355 67 P-QGIDIYFENVGG-KMLDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGD 132 (180)
Q Consensus 67 ~-~~~d~~~d~~g~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (180)
. +++|++++|++. ......+++++++|+++.++..... .........+.+++++.++....
T Consensus 198 ~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 260 (271)
T cd05188 198 GGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGG-----PPLDDLRRLLFKELTIIGSTGGT 260 (271)
T ss_pred cCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCC-----CCcccHHHHHhcceEEEEeecCC
Confidence 3 389999999998 6888899999999999999875532 11112345677888988887755
No 128
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.44 E-value=5.2e-12 Score=96.81 Aligned_cols=158 Identities=13% Similarity=0.075 Sum_probs=114.2
Q ss_pred HHHHHHHHcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC----Cc--chHHHHHHhHcCCCccEEEeC
Q 041355 4 VGNLIILVCSP-KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----EE--PDLDAALKRWFPQGIDIYFEN 76 (180)
Q Consensus 4 a~~~l~~~~~~-~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~----~~--~~~~~~~~~~~~~~~d~~~d~ 76 (180)
+|.++.+..++ -+|++|+|.| .|++|+.+++.+|.+|++|+++..++.+ .. .+.. ...+.. .++|++++|
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~~~e~v-~~aDVVI~a 264 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-TMEEAV-KEGDIFVTT 264 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-cHHHHH-cCCCEEEEC
Confidence 34556565554 6899999999 9999999999999999999998877655 00 0000 011111 258999999
Q ss_pred CChh-hHHHH-HHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchHHHHHHHHH--HHHHHHHCCC
Q 041355 77 VGGK-MLDAV-LLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYLKFLE--LVIPAIREGK 152 (180)
Q Consensus 77 ~g~~-~~~~~-~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~ 152 (180)
+|.. .+... +..++++|+++++|.. ...+++..+..+++++.+...... ...++ ..+.++.+|.
T Consensus 265 tG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~~~~----~~~~~~g~aI~LLa~Gr 332 (413)
T cd00401 265 TGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKPQVD----RYELPDGRRIILLAEGR 332 (413)
T ss_pred CCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccCCcc----eEEcCCcchhhhhhCcC
Confidence 9977 56654 8999999999999853 124666777788888887766431 11233 6789999998
Q ss_pred c---cceeeee-----cchh-hHHHHHHHHHhh
Q 041355 153 M---VYVEDIA-----EGLE-KISRNCYTLKWR 176 (180)
Q Consensus 153 ~---~~~~~~~-----~~~~-~~~~a~~~l~~~ 176 (180)
+ .+.+++. ++|+ ++.++++.++++
T Consensus 333 lvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~ 365 (413)
T cd00401 333 LVNLGCATGHPSFVMSNSFTNQVLAQIELWTNR 365 (413)
T ss_pred CCCCcccCCCccceechhHHHHHHHHHHHHhcC
Confidence 8 4456677 8898 999999988765
No 129
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.30 E-value=2.8e-12 Score=83.64 Aligned_cols=99 Identities=21% Similarity=0.122 Sum_probs=63.1
Q ss_pred CCCccEEEeCCC--hhhH-HHHHHhhccCCEEEEEeccccccCCCCccccchHHHhhcCcEEEeeeccchH--HHHHHHH
Q 041355 67 PQGIDIYFENVG--GKML-DAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYY--HLYLKFL 141 (180)
Q Consensus 67 ~~~~d~~~d~~g--~~~~-~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 141 (180)
.+++|++|||+| ++.+ ..++++| ++|+++.++. . ............+.+....... ....+.+
T Consensus 17 ~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 84 (127)
T PF13602_consen 17 PGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-D----------LPSFARRLKGRSIRYSFLFSVDPNAIRAEAL 84 (127)
T ss_dssp TS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-H----------HHHHHHHHHCHHCEEECCC-H--HHHHHHHH
T ss_pred CCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-c----------ccchhhhhcccceEEEEEEecCCCchHHHHH
Confidence 458999999999 6633 6667788 9999999863 0 0111111112222222222111 2245679
Q ss_pred HHHHHHHHCCCccceeeeecchhhHHHHHHHHHhhh
Q 041355 142 ELVIPAIREGKMVYVEDIAEGLEKISRNCYTLKWRV 177 (180)
Q Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~ 177 (180)
+++.+++++|+++|.+.++||++++.+|++.++++.
T Consensus 85 ~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~ 120 (127)
T PF13602_consen 85 EELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGH 120 (127)
T ss_dssp HHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT-
T ss_pred HHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999875
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.23 E-value=2.4e-10 Score=89.84 Aligned_cols=133 Identities=14% Similarity=0.020 Sum_probs=90.7
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------C-------c-------------chHHHHHHh
Q 041355 14 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------E-------E-------------PDLDAALKR 64 (180)
Q Consensus 14 ~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------~-------~-------------~~~~~~~~~ 64 (180)
..++++|+|.| +|++|+++++.||.+|++|++++.++++ + + +++.+..++
T Consensus 162 ~~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 35799999999 9999999999999999999999988765 0 0 012222222
Q ss_pred H-cC--CCccEEEeCCChh------h-HHHHHHhhccCCEEEEEeccccccCCCCccccchHHHhh-cCcEEEeeeccch
Q 041355 65 W-FP--QGIDIYFENVGGK------M-LDAVLLNMRLRGRIAVSSIISQYNLEKPEGVHNLEQLIG-KRIRLEGFLAGDY 133 (180)
Q Consensus 65 ~-~~--~~~d~~~d~~g~~------~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 133 (180)
. .+ +++|++|+|++.+ . .+.+++.++++|+++.++...+.+ -........++. +++++.|.+..+
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~---~e~t~~~~~v~~~~gVti~Gv~n~P- 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGN---CELTVPGEVVVTDNGVTIIGYTDLP- 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCC---cccccCccceEeECCEEEEEeCCCc-
Confidence 2 22 3799999999853 3 488999999999999998753221 011222234554 788888876422
Q ss_pred HHHHHHHHHHHHHHHHCCCccc
Q 041355 134 YHLYLKFLELVIPAIREGKMVY 155 (180)
Q Consensus 134 ~~~~~~~~~~~~~~~~~g~~~~ 155 (180)
.++.....+++.++.+..
T Consensus 317 ----~~~p~~As~lla~~~i~l 334 (509)
T PRK09424 317 ----SRLPTQSSQLYGTNLVNL 334 (509)
T ss_pred ----hhHHHHHHHHHHhCCccH
Confidence 233444677777766543
No 131
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.56 E-value=1.2e-06 Score=67.77 Aligned_cols=97 Identities=16% Similarity=0.088 Sum_probs=71.0
Q ss_pred HHHHHHHHcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCc------chHHHHHHhHcCCCccEEEeC
Q 041355 4 VGNLIILVCSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEE------PDLDAALKRWFPQGIDIYFEN 76 (180)
Q Consensus 4 a~~~l~~~~~~~-~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~------~~~~~~~~~~~~~~~d~~~d~ 76 (180)
+|.++.+..++. .|++++|.| .|.+|..+++.++.+|++|+++.+++.+.. .+.. .+.+.. .++|++++|
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~-~l~eal-~~aDVVI~a 274 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVM-TMEEAA-ELGDIFVTA 274 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEec-CHHHHH-hCCCEEEEC
Confidence 456665554554 899999999 899999999999999999999887765410 0110 112221 268999999
Q ss_pred CChh-hHH-HHHHhhccCCEEEEEecccc
Q 041355 77 VGGK-MLD-AVLLNMRLRGRIAVSSIISQ 103 (180)
Q Consensus 77 ~g~~-~~~-~~~~~l~~~G~~v~~~~~~~ 103 (180)
+|.. .+. ..+..+++++.++++|....
T Consensus 275 TG~~~vI~~~~~~~mK~GailiNvG~~d~ 303 (425)
T PRK05476 275 TGNKDVITAEHMEAMKDGAILANIGHFDN 303 (425)
T ss_pred CCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence 9976 454 56788999999999987653
No 132
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.42 E-value=4.4e-06 Score=64.41 Aligned_cols=95 Identities=17% Similarity=0.131 Sum_probs=68.1
Q ss_pred HHHHHHHcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC------CcchHHHHHHhHcCCCccEEEeCC
Q 041355 5 GNLIILVCS-PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK------EEPDLDAALKRWFPQGIDIYFENV 77 (180)
Q Consensus 5 ~~~l~~~~~-~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~------~~~~~~~~~~~~~~~~~d~~~d~~ 77 (180)
+.++.+..+ .-.|++|+|.| .|.+|..+++.++.+|++|+++..++.+ ...... .+.+.. .+.|+++++.
T Consensus 182 ~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~leeal-~~aDVVItaT 258 (406)
T TIGR00936 182 IDGILRATNLLIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVM-TMEEAA-KIGDIFITAT 258 (406)
T ss_pred HHHHHHhcCCCCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeC-CHHHHH-hcCCEEEECC
Confidence 445545444 36899999999 9999999999999999999998776644 000000 011111 2579999999
Q ss_pred Chh-hHH-HHHHhhccCCEEEEEeccc
Q 041355 78 GGK-MLD-AVLLNMRLRGRIAVSSIIS 102 (180)
Q Consensus 78 g~~-~~~-~~~~~l~~~G~~v~~~~~~ 102 (180)
|.. .+. ..+..+++++.++++|...
T Consensus 259 G~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 259 GNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred CCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 977 454 4778899999999997754
No 133
>PLN02494 adenosylhomocysteinase
Probab=98.38 E-value=7.1e-06 Score=64.08 Aligned_cols=92 Identities=16% Similarity=0.189 Sum_probs=69.9
Q ss_pred HHHHHHHcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC------C---cchHHHHHHhHcCCCccEEE
Q 041355 5 GNLIILVCSP-KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK------E---EPDLDAALKRWFPQGIDIYF 74 (180)
Q Consensus 5 ~~~l~~~~~~-~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~------~---~~~~~~~~~~~~~~~~d~~~ 74 (180)
+.++.+..++ -.|++++|.| .|.+|..+++.++.+|++|+++.+++.+ . ..+..+.+ ...|+++
T Consensus 241 ~d~i~r~t~i~LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv~leEal-----~~ADVVI 314 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVLTLEDVV-----SEADIFV 314 (477)
T ss_pred HHHHHHhcCCccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeeccHHHHH-----hhCCEEE
Confidence 4556566554 5799999999 9999999999999999999998877653 0 00111111 1479999
Q ss_pred eCCChh-h-HHHHHHhhccCCEEEEEeccc
Q 041355 75 ENVGGK-M-LDAVLLNMRLRGRIAVSSIIS 102 (180)
Q Consensus 75 d~~g~~-~-~~~~~~~l~~~G~~v~~~~~~ 102 (180)
.|.|.. . ....+..+++++.++++|...
T Consensus 315 ~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 315 TTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred ECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 999977 3 377889999999999998753
No 134
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.31 E-value=3.9e-06 Score=61.76 Aligned_cols=89 Identities=20% Similarity=0.277 Sum_probs=60.9
Q ss_pred HcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCCCC----C---------cchH-HHHHHhHc--CCCccE
Q 041355 11 VCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEK----E---------EPDL-DAALKRWF--PQGIDI 72 (180)
Q Consensus 11 ~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~--~vi~~~~~~~~----~---------~~~~-~~~~~~~~--~~~~d~ 72 (180)
...+++|++||..| +|+ |..++++++..|. +|++++.+++. . ..++ ...+.+.. ++.||+
T Consensus 72 ~~~~~~g~~VLDiG-~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD~ 149 (272)
T PRK11873 72 LAELKPGETVLDLG-SGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVDV 149 (272)
T ss_pred hccCCCCCEEEEeC-CCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCceeE
Confidence 35678999999999 676 9888888888765 69999887654 0 0000 01122211 237999
Q ss_pred EEeCC------Ch-hhHHHHHHhhccCCEEEEEecc
Q 041355 73 YFENV------GG-KMLDAVLLNMRLRGRIAVSSII 101 (180)
Q Consensus 73 ~~d~~------g~-~~~~~~~~~l~~~G~~v~~~~~ 101 (180)
++... .. ..+..+.++|+|+|+++..+..
T Consensus 150 Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~ 185 (272)
T PRK11873 150 IISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVV 185 (272)
T ss_pred EEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEee
Confidence 88543 21 2688899999999999987654
No 135
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.29 E-value=4.7e-06 Score=65.92 Aligned_cols=88 Identities=18% Similarity=0.157 Sum_probs=66.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------------C---------------cchHHHHHHhH
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------------E---------------EPDLDAALKRW 65 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------------~---------------~~~~~~~~~~~ 65 (180)
.++++++|.| +|.+|+++++.++.+|+.|++++.++++ + ++++.+..++.
T Consensus 162 vp~akVlViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 3578999999 8999999999999999999988887654 0 01222222222
Q ss_pred cC---CCccEEEeCC---Chh----hHHHHHHhhccCCEEEEEecccc
Q 041355 66 FP---QGIDIYFENV---GGK----MLDAVLLNMRLRGRIAVSSIISQ 103 (180)
Q Consensus 66 ~~---~~~d~~~d~~---g~~----~~~~~~~~l~~~G~~v~~~~~~~ 103 (180)
.. .++|++|+|+ |.+ .....++.+++++.++.++...+
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~G 288 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQG 288 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCC
Confidence 22 2799999999 542 45677899999999999987654
No 136
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.20 E-value=1.4e-05 Score=57.39 Aligned_cols=87 Identities=24% Similarity=0.266 Sum_probs=59.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC----------------------CcchHHHHHHhHc--CCCcc
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----------------------EEPDLDAALKRWF--PQGID 71 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~----------------------~~~~~~~~~~~~~--~~~~d 71 (180)
++++++|+||+|++|..+++.+...|++|+.++++++. +...+.+.+.+.. .+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 46899999999999999999999999999999987652 1111111121111 13679
Q ss_pred EEEeCCChh------------------------hHHHHHHhhccCCEEEEEeccc
Q 041355 72 IYFENVGGK------------------------MLDAVLLNMRLRGRIAVSSIIS 102 (180)
Q Consensus 72 ~~~d~~g~~------------------------~~~~~~~~l~~~G~~v~~~~~~ 102 (180)
.++.+.|.. .+...+++++++|+++.+++..
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 999888731 1234445666788999887654
No 137
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.10 E-value=4.1e-05 Score=54.56 Aligned_cols=88 Identities=30% Similarity=0.355 Sum_probs=62.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------------CcchHHHHHHhHcC--CCccE
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------------EEPDLDAALKRWFP--QGIDI 72 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------------~~~~~~~~~~~~~~--~~~d~ 72 (180)
.++.++|+||++++|.+..+.+-..|++|+.++|+.++ +.++....+..... +++|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 45788999999999999999999999999999999885 12232333333333 37999
Q ss_pred EEeCCChh---h-----------------------HHHHHHhh--ccCCEEEEEecccc
Q 041355 73 YFENVGGK---M-----------------------LDAVLLNM--RLRGRIAVSSIISQ 103 (180)
Q Consensus 73 ~~d~~g~~---~-----------------------~~~~~~~l--~~~G~~v~~~~~~~ 103 (180)
+++..|-. . ....++.+ +..|.++++++..+
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG 143 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAG 143 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccc
Confidence 99988841 0 12223322 45689999988775
No 138
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.07 E-value=0.00012 Score=56.34 Aligned_cols=85 Identities=15% Similarity=0.125 Sum_probs=59.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------Cc-----chHHHHHHhHcCCCccEEEeCC---Ch-
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------EE-----PDLDAALKRWFPQGIDIYFENV---GG- 79 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------~~-----~~~~~~~~~~~~~~~d~~~d~~---g~- 79 (180)
+.+++|.| +|.+|+.+++.++.+|++|++++++.++ .. ..-.+.+.+.. .++|++++|+ +.
T Consensus 167 ~~~VlViG-aG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l-~~aDvVI~a~~~~g~~ 244 (370)
T TIGR00518 167 PGDVTIIG-GGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAV-KRADLLIGAVLIPGAK 244 (370)
T ss_pred CceEEEEc-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHH-ccCCEEEEccccCCCC
Confidence 34588999 7999999999999999999988876543 00 00011222222 2589999998 33
Q ss_pred -h--hHHHHHHhhccCCEEEEEecccc
Q 041355 80 -K--MLDAVLLNMRLRGRIAVSSIISQ 103 (180)
Q Consensus 80 -~--~~~~~~~~l~~~G~~v~~~~~~~ 103 (180)
+ .....+..+++++.++.++...+
T Consensus 245 ~p~lit~~~l~~mk~g~vIvDva~d~G 271 (370)
T TIGR00518 245 APKLVSNSLVAQMKPGAVIVDVAIDQG 271 (370)
T ss_pred CCcCcCHHHHhcCCCCCEEEEEecCCC
Confidence 2 13566778899999999987654
No 139
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.00 E-value=1.7e-05 Score=55.00 Aligned_cols=38 Identities=13% Similarity=0.251 Sum_probs=34.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK 53 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~ 53 (180)
-|.+|||+||++++|+...+-...+|-+||.+.|+.++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~ 41 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEER 41 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHH
Confidence 47899999999999999999888899999999998776
No 140
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.99 E-value=6.3e-05 Score=56.10 Aligned_cols=86 Identities=22% Similarity=0.180 Sum_probs=62.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC----Cc--ch--HHHHHHhHcCCCccEEEeCCChh-hHHHHH
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----EE--PD--LDAALKRWFPQGIDIYFENVGGK-MLDAVL 86 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~----~~--~~--~~~~~~~~~~~~~d~~~d~~g~~-~~~~~~ 86 (180)
.|.+++|.| .|.+|..+++.++.+|++|++++++.++ .. .. ....+.+.. .++|++|+|+... .....+
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l-~~aDiVI~t~p~~~i~~~~l 228 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEV-GKIDIIFNTIPALVLTKEVL 228 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHh-CCCCEEEECCChhhhhHHHH
Confidence 689999999 7999999999999999999999887543 00 00 011222222 2689999999865 334566
Q ss_pred HhhccCCEEEEEecccc
Q 041355 87 LNMRLRGRIAVSSIISQ 103 (180)
Q Consensus 87 ~~l~~~G~~v~~~~~~~ 103 (180)
..+++++.++.++...+
T Consensus 229 ~~~~~g~vIIDla~~pg 245 (296)
T PRK08306 229 SKMPPEALIIDLASKPG 245 (296)
T ss_pred HcCCCCcEEEEEccCCC
Confidence 78899999999977553
No 141
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.98 E-value=0.0001 Score=54.39 Aligned_cols=63 Identities=16% Similarity=0.242 Sum_probs=46.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-----------------CcchHH---HHHHhHcCCCccEEEe
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-----------------EEPDLD---AALKRWFPQGIDIYFE 75 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-----------------~~~~~~---~~~~~~~~~~~d~~~d 75 (180)
.+++++|+||+|++|...++.+...|++|++++++++. +.+++. +.+.+...+.+|+++.
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~ 82 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN 82 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence 46789999999999999999888889999999987643 122222 2222333457999999
Q ss_pred CCC
Q 041355 76 NVG 78 (180)
Q Consensus 76 ~~g 78 (180)
+.|
T Consensus 83 ~Ag 85 (277)
T PRK05993 83 NGA 85 (277)
T ss_pred CCC
Confidence 876
No 142
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.96 E-value=9.5e-05 Score=58.04 Aligned_cols=95 Identities=18% Similarity=0.136 Sum_probs=66.6
Q ss_pred HHHHHHcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcc----hH-HHHHHhHcCCCccEEEeCCCh
Q 041355 6 NLIILVCS-PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEP----DL-DAALKRWFPQGIDIYFENVGG 79 (180)
Q Consensus 6 ~~l~~~~~-~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~----~~-~~~~~~~~~~~~d~~~d~~g~ 79 (180)
..+.+..+ .-.|++++|.| .|.+|..+++.++.+|++|+++.+++.+..+ .+ ...+.+.. ...|+++.|.|.
T Consensus 242 d~~~R~~~~~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~~leell-~~ADIVI~atGt 319 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTLEDVV-ETADIFVTATGN 319 (476)
T ss_pred HHHHHhcCCCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceeccHHHHH-hcCCEEEECCCc
Confidence 34444433 34799999999 8999999999999999999888766443100 00 00111111 258999999987
Q ss_pred h-hH-HHHHHhhccCCEEEEEeccc
Q 041355 80 K-ML-DAVLLNMRLRGRIAVSSIIS 102 (180)
Q Consensus 80 ~-~~-~~~~~~l~~~G~~v~~~~~~ 102 (180)
. .+ ...+..+++++.++++|...
T Consensus 320 ~~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 320 KDIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred ccccCHHHHhccCCCcEEEEcCCCc
Confidence 6 44 37888999999999998764
No 143
>PRK08324 short chain dehydrogenase; Validated
Probab=97.93 E-value=7.4e-05 Score=61.96 Aligned_cols=37 Identities=24% Similarity=0.354 Sum_probs=33.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+|++++|+||+|++|..+++.+...|++|++++++.+
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~ 457 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEE 457 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHH
Confidence 5789999999999999999999999999999988754
No 144
>PRK12742 oxidoreductase; Provisional
Probab=97.92 E-value=0.00014 Score=52.08 Aligned_cols=35 Identities=20% Similarity=0.155 Sum_probs=30.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
++++++|+||+|++|..+++.+...|++|+.+.++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~ 39 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAG 39 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 47899999999999999999998899998877654
No 145
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.87 E-value=0.00021 Score=49.19 Aligned_cols=82 Identities=21% Similarity=0.219 Sum_probs=59.2
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC------------CcchHHHHHHhHcCCCccEEEeCCCh-----hhH
Q 041355 20 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK------------EEPDLDAALKRWFPQGIDIYFENVGG-----KML 82 (180)
Q Consensus 20 vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~------------~~~~~~~~~~~~~~~~~d~~~d~~g~-----~~~ 82 (180)
|+|.||+|.+|...++.+...|.+|++++|++++ +-.+. +.+.+... ++|.+|.++|. +..
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~-~~~~~al~-~~d~vi~~~~~~~~~~~~~ 78 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAEDSPGVEIIQGDLFDP-DSVKAALK-GADAVIHAAGPPPKDVDAA 78 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEEESCTTCH-HHHHHHHT-TSSEEEECCHSTTTHHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcccccccccceeeehhh-hhhhhhhh-hcchhhhhhhhhccccccc
Confidence 7899999999999999999999999999999875 11112 23333333 69999999983 245
Q ss_pred HHHHHhhccCC--EEEEEecccc
Q 041355 83 DAVLLNMRLRG--RIAVSSIISQ 103 (180)
Q Consensus 83 ~~~~~~l~~~G--~~v~~~~~~~ 103 (180)
..+++.++..| +++.++....
T Consensus 79 ~~~~~a~~~~~~~~~v~~s~~~~ 101 (183)
T PF13460_consen 79 KNIIEAAKKAGVKRVVYLSSAGV 101 (183)
T ss_dssp HHHHHHHHHTTSSEEEEEEETTG
T ss_pred ccccccccccccccceeeecccc
Confidence 55666665444 7777766553
No 146
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.83 E-value=8.2e-05 Score=54.18 Aligned_cols=39 Identities=21% Similarity=0.296 Sum_probs=36.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK 53 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~ 53 (180)
..+.+++|+||++++|...+..+...|.+++.++|+.++
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~k 42 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDK 42 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHH
Confidence 467899999999999999999999999999999999886
No 147
>PRK06182 short chain dehydrogenase; Validated
Probab=97.83 E-value=0.00017 Score=53.01 Aligned_cols=63 Identities=25% Similarity=0.394 Sum_probs=46.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-----------------CcchHHHHHHhHc--CCCccEEEeC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-----------------EEPDLDAALKRWF--PQGIDIYFEN 76 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-----------------~~~~~~~~~~~~~--~~~~d~~~d~ 76 (180)
++.+++|+||+|++|..+++.+...|++|++++++.++ +.+++...+.+.. .+++|+++.+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ 81 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN 81 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 46789999999999999999888889999999887543 2222222233221 2479999999
Q ss_pred CC
Q 041355 77 VG 78 (180)
Q Consensus 77 ~g 78 (180)
.|
T Consensus 82 ag 83 (273)
T PRK06182 82 AG 83 (273)
T ss_pred CC
Confidence 87
No 148
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.81 E-value=0.00023 Score=52.36 Aligned_cols=61 Identities=23% Similarity=0.340 Sum_probs=44.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-----------------CcchHHHHHHhHc--CCCccEEEeCCC
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-----------------EEPDLDAALKRWF--PQGIDIYFENVG 78 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-----------------~~~~~~~~~~~~~--~~~~d~~~d~~g 78 (180)
++++|+||+|++|..+++.+...|++|++++++.+. +.+++.+.+.... .+++|+++.+.|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 81 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG 81 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 478999999999999999998889999999887542 1122222222221 247999999987
No 149
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.80 E-value=0.00038 Score=50.29 Aligned_cols=36 Identities=25% Similarity=0.261 Sum_probs=31.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
++.+++|+||+|++|..+++.+...|++|+++.++.
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~ 40 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQK 40 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCc
Confidence 467899999999999999998888899999887754
No 150
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.76 E-value=0.00035 Score=51.06 Aligned_cols=37 Identities=19% Similarity=0.195 Sum_probs=33.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||++++|..+++.+...|++|+.++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDAD 41 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4679999999999999999888889999999988754
No 151
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.00029 Score=53.50 Aligned_cols=37 Identities=27% Similarity=0.253 Sum_probs=32.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||+|++|..+++.+...|++|+.++++++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~ 43 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEE 43 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4678999999999999999988889999999988754
No 152
>PRK06128 oxidoreductase; Provisional
Probab=97.70 E-value=0.00047 Score=51.49 Aligned_cols=36 Identities=11% Similarity=0.148 Sum_probs=30.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.|.++||+||++++|..+++.+...|++|+.+.++.
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~ 89 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPE 89 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCc
Confidence 367899999999999998888888899998876643
No 153
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00046 Score=49.77 Aligned_cols=37 Identities=22% Similarity=0.248 Sum_probs=32.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++.+++|+||+|++|..++..+...|++|++++++++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~ 42 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAA 42 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 4788999999999999999988889999999887655
No 154
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00054 Score=50.16 Aligned_cols=36 Identities=22% Similarity=0.307 Sum_probs=32.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.|++++|+||++++|.++++.+...|++|+.++++.
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~ 42 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNE 42 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 478899999999999999999988999999988764
No 155
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.65 E-value=0.00068 Score=49.89 Aligned_cols=89 Identities=24% Similarity=0.277 Sum_probs=61.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-------------------------CcchHHHHHHhH--cCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-------------------------EEPDLDAALKRW--FPQ 68 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-------------------------~~~~~~~~~~~~--~~~ 68 (180)
.|+.|+|+||++++|...+.-.-..|++++.+++...+ +.++....+.+. .-|
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 57889999999999998777777889988888888765 112222222221 135
Q ss_pred CccEEEeCCChh-----------h---------------HHHHHHhhccC--CEEEEEeccccc
Q 041355 69 GIDIYFENVGGK-----------M---------------LDAVLLNMRLR--GRIAVSSIISQY 104 (180)
Q Consensus 69 ~~d~~~d~~g~~-----------~---------------~~~~~~~l~~~--G~~v~~~~~~~~ 104 (180)
++|+.++..|-. . ...+++.+++. |+++.+++..+.
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK 154 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence 899999987731 0 13345566433 999999887764
No 156
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.62 E-value=0.0019 Score=44.92 Aligned_cols=87 Identities=15% Similarity=0.146 Sum_probs=56.0
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCCCC------------CcchHHHHHHhHcCC-CccEEEe-C
Q 041355 12 CSPKKGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEK------------EEPDLDAALKRWFPQ-GIDIYFE-N 76 (180)
Q Consensus 12 ~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g-~~vi~~~~~~~~------------~~~~~~~~~~~~~~~-~~d~~~d-~ 76 (180)
..+++|++||..| +|+-+.......+..+ .+|++++.++.. .+....+.+++..+. ++|+++. .
T Consensus 28 ~~i~~g~~VLDiG-~GtG~~~~~l~~~~~~~~~v~~vDis~~~~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~V~~~~ 106 (188)
T TIGR00438 28 KLIKPGDTVLDLG-AAPGGWSQVAVEQVGGKGRVIAVDLQPMKPIENVDFIRGDFTDEEVLNKIRERVGDDKVDVVMSDA 106 (188)
T ss_pred cccCCCCEEEEec-CCCCHHHHHHHHHhCCCceEEEEeccccccCCCceEEEeeCCChhHHHHHHHHhCCCCccEEEcCC
Confidence 4468999999999 6655554333333333 489999988742 122333445555554 8999984 2
Q ss_pred ----CCh-------------hhHHHHHHhhccCCEEEEEe
Q 041355 77 ----VGG-------------KMLDAVLLNMRLRGRIAVSS 99 (180)
Q Consensus 77 ----~g~-------------~~~~~~~~~l~~~G~~v~~~ 99 (180)
.|. ..+..+.++|+|+|+++...
T Consensus 107 ~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 107 APNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred CCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 221 24566778999999998754
No 157
>PRK06398 aldose dehydrogenase; Validated
Probab=97.61 E-value=0.00033 Score=51.10 Aligned_cols=63 Identities=21% Similarity=0.226 Sum_probs=46.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC------------CcchHHHHHHhHc--CCCccEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK------------EEPDLDAALKRWF--PQGIDIYFENVG 78 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~------------~~~~~~~~~~~~~--~~~~d~~~d~~g 78 (180)
.|.+++|+||++++|..+++.+...|++|+.++++... +..++.+.+.+.. .+++|+++.+.|
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag 81 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 46899999999999999999998899999998887553 2222222232222 236999999877
No 158
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.61 E-value=0.00097 Score=46.86 Aligned_cols=89 Identities=16% Similarity=0.274 Sum_probs=64.5
Q ss_pred CCCEEEEec-CCchHHHHHHHHHHHcCCEEEEEeCCCCC------------------Ccch---HHHHHHhHcCCCccEE
Q 041355 16 KGEYVYVSA-ASGAVGQLVGQFAKLAGCYVVGSAGSKEK------------------EEPD---LDAALKRWFPQGIDIY 73 (180)
Q Consensus 16 ~g~~vlI~G-a~g~vG~~~iqlak~~g~~vi~~~~~~~~------------------~~~~---~~~~~~~~~~~~~d~~ 73 (180)
..+.|||+| +.|++|.+...-...-|+.|++++|+-+. ++++ +..++++...|+.|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 345688875 56899998888888889999999999886 2232 3456677777799999
Q ss_pred EeCCChhh-------------------------HHHHH--HhhccCCEEEEEeccccc
Q 041355 74 FENVGGKM-------------------------LDAVL--LNMRLRGRIAVSSIISQY 104 (180)
Q Consensus 74 ~d~~g~~~-------------------------~~~~~--~~l~~~G~~v~~~~~~~~ 104 (180)
++..|.+. +...+ .+.+..|+++++|+..+.
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~ 143 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGV 143 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEE
Confidence 99777531 12222 245788999999988754
No 159
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.59 E-value=0.00021 Score=53.25 Aligned_cols=37 Identities=16% Similarity=0.183 Sum_probs=33.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+|.+++|+||+|++|..+++.+...|++|+.++++.+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 44 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEA 44 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5789999999999999999999889999999888654
No 160
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.59 E-value=0.00094 Score=52.77 Aligned_cols=36 Identities=19% Similarity=0.265 Sum_probs=32.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
+|.+++|+||+|++|..+++.+...|++|++++++.
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~ 244 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPA 244 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 578999999999999999999988999999887753
No 161
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.00037 Score=51.06 Aligned_cols=64 Identities=22% Similarity=0.376 Sum_probs=46.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc--CCCccEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF--PQGIDIYFENVG 78 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~--~~~~d~~~d~~g 78 (180)
.+.+++|+||+|++|..+++.+...|++|++++++.+. +.+++.+.+.... .+.+|+++.|.|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag 82 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAG 82 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 35689999999999999888888889999999987543 2222333233221 247999999987
Q ss_pred h
Q 041355 79 G 79 (180)
Q Consensus 79 ~ 79 (180)
.
T Consensus 83 ~ 83 (270)
T PRK06179 83 V 83 (270)
T ss_pred C
Confidence 3
No 162
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.00027 Score=51.36 Aligned_cols=38 Identities=29% Similarity=0.315 Sum_probs=33.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
-.+++++|+||+|++|..+++.+...|++|++++++.+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~ 44 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVE 44 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35789999999999999999999889999999988754
No 163
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.00024 Score=53.86 Aligned_cols=37 Identities=27% Similarity=0.348 Sum_probs=33.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+++++|+||++++|...++.+...|++|+.++++++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~ 42 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEE 42 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4689999999999999999999999999999988754
No 164
>PRK07985 oxidoreductase; Provisional
Probab=97.55 E-value=0.0013 Score=49.06 Aligned_cols=35 Identities=17% Similarity=0.097 Sum_probs=30.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.+.+++|+||++++|..+++.+...|++|+.+.++
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~ 82 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLP 82 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCC
Confidence 45789999999999999988888889999887654
No 165
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00032 Score=50.99 Aligned_cols=37 Identities=16% Similarity=0.201 Sum_probs=33.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.|++++|+||+|++|..+++.+...|++|+++++++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~ 42 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPE 42 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 5789999999999999999999889999999988754
No 166
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00037 Score=50.73 Aligned_cols=62 Identities=24% Similarity=0.281 Sum_probs=45.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------------CcchHHH---HHHhHcCCCccEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------------EEPDLDA---ALKRWFPQGIDIYFENVG 78 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------------~~~~~~~---~~~~~~~~~~d~~~d~~g 78 (180)
+|.+++|+||+|++|...++.+...|++|+.++++... +.+.+.. .+.+. .+++|+++.+.|
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~vi~~ag 86 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAVLER-LGGVDILVHVLG 86 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhcCCceeEEecCCCCHHHHHHHHHHHHHH-cCCCCEEEECCc
Confidence 57899999999999999998888889999999887543 1122222 22222 247899999887
No 167
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00038 Score=49.80 Aligned_cols=37 Identities=16% Similarity=0.277 Sum_probs=32.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++.+++|+||+|.+|..+++.+...|++|+.++++.+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~ 42 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAA 42 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChH
Confidence 3789999999999999999988888999999988654
No 168
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00073 Score=48.17 Aligned_cols=61 Identities=20% Similarity=0.221 Sum_probs=43.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-----------------CcchHHHHHHhHc-CCCccEEEeCCC
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-----------------EEPDLDAALKRWF-PQGIDIYFENVG 78 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-----------------~~~~~~~~~~~~~-~~~~d~~~d~~g 78 (180)
.+++|+||+|++|...++.+...|++|++++++++. .+.+....+.+.. .+++|+++.+.|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 468999999999999888888889999999988653 1222222223322 237899888775
No 169
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.52 E-value=0.00059 Score=47.07 Aligned_cols=79 Identities=23% Similarity=0.219 Sum_probs=55.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCC---------cchHHHHHHhHcCCCccEEEeCCCh-h-----
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKE---------EPDLDAALKRWFPQGIDIYFENVGG-K----- 80 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~---------~~~~~~~~~~~~~~~~d~~~d~~g~-~----- 80 (180)
.|.+|.|+| .|.+|+..++.++.+|++|++.+++.... ..++.+.+. ..|+++.++.. +
T Consensus 35 ~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~-----~aDiv~~~~plt~~T~~l 108 (178)
T PF02826_consen 35 RGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLA-----QADIVSLHLPLTPETRGL 108 (178)
T ss_dssp TTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHH-----H-SEEEE-SSSSTTTTTS
T ss_pred CCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcc-----hhhhhhhhhcccccccee
Confidence 589999999 99999999999999999999999987530 112222222 26888777652 2
Q ss_pred hHHHHHHhhccCCEEEEEec
Q 041355 81 MLDAVLLNMRLRGRIAVSSI 100 (180)
Q Consensus 81 ~~~~~~~~l~~~G~~v~~~~ 100 (180)
.-...+..++++..+++++-
T Consensus 109 i~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 109 INAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp BSHHHHHTSTTTEEEEESSS
T ss_pred eeeeeeeccccceEEEeccc
Confidence 12456678888888888754
No 170
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.52 E-value=0.00033 Score=51.14 Aligned_cols=37 Identities=16% Similarity=0.218 Sum_probs=32.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++++++|+||++++|..+++.+...|++|+.++++++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAE 41 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4789999999999999999988889999999988754
No 171
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=97.51 E-value=0.00046 Score=50.83 Aligned_cols=38 Identities=26% Similarity=0.406 Sum_probs=35.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK 53 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~ 53 (180)
.|..++|+|++.++|.+++..+...|++|+.+.+++++
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~ 44 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEER 44 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 57889999999999999999999999999999998775
No 172
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.00044 Score=50.54 Aligned_cols=37 Identities=22% Similarity=0.252 Sum_probs=33.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.|++++|+||++++|...++.+...|++|+.++++++
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~ 43 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEE 43 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4789999999999999999999889999999988764
No 173
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.00035 Score=51.08 Aligned_cols=37 Identities=19% Similarity=0.199 Sum_probs=33.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++.+++|+||+|++|...++.+...|++|+.++++++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~ 45 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTES 45 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5789999999999999999988889999999988754
No 174
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.49 E-value=0.00038 Score=50.27 Aligned_cols=37 Identities=11% Similarity=0.250 Sum_probs=32.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+|++++|+|++|++|+.+++.+...|++|+.++++.+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~ 40 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQE 40 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4789999999999999999999889999999888754
No 175
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00036 Score=51.99 Aligned_cols=36 Identities=22% Similarity=0.366 Sum_probs=32.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+.+++|+||+|++|..+++.+...|++|++++++.+
T Consensus 40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~ 75 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARRED 75 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 578999999999999999888888999999998754
No 176
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00074 Score=48.27 Aligned_cols=64 Identities=23% Similarity=0.211 Sum_probs=46.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC------------CcchHHHHHHhHcCC-CccEEEeCCCh
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK------------EEPDLDAALKRWFPQ-GIDIYFENVGG 79 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~------------~~~~~~~~~~~~~~~-~~d~~~d~~g~ 79 (180)
.+.+++|+||+|++|...++.+...|++|+.+.++... +.+.+.+.+.+.... ++|+++.+.|.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~ 78 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVGI 78 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccccCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCC
Confidence 35789999999999999998888889999999887543 222222223332222 68999998873
No 177
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.0019 Score=48.06 Aligned_cols=36 Identities=14% Similarity=0.221 Sum_probs=31.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
++.+++|+||+|++|..+++.+...|++|+.+.++.
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~ 80 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDE 80 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 467899999999999998888877899998887764
No 178
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.0014 Score=47.09 Aligned_cols=36 Identities=17% Similarity=0.188 Sum_probs=31.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
++.+++|+||+|++|..+++.+...|++++.+.++.
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~ 39 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGS 39 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCC
Confidence 467899999999999999999988999988776653
No 179
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.47 E-value=0.0003 Score=55.56 Aligned_cols=83 Identities=14% Similarity=0.195 Sum_probs=59.2
Q ss_pred cCCCCCCEEE----EecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCcc-EEEeCCChh------
Q 041355 12 CSPKKGEYVY----VSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGID-IYFENVGGK------ 80 (180)
Q Consensus 12 ~~~~~g~~vl----I~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~d~~g~~------ 80 (180)
.++++|+.++ |+||+|++|.+++|+++..|++|+++.+.+..... ....+++ +++|..+-.
T Consensus 29 ~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~--------~~~~~~~~~~~d~~~~~~~~~l~ 100 (450)
T PRK08261 29 RRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA--------GWGDRFGALVFDATGITDPADLK 100 (450)
T ss_pred cCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccccc--------CcCCcccEEEEECCCCCCHHHHH
Confidence 4557899988 99999999999999999999999988765432000 0011455 677776532
Q ss_pred ----hHHHHHHhhccCCEEEEEeccc
Q 041355 81 ----MLDAVLLNMRLRGRIAVSSIIS 102 (180)
Q Consensus 81 ----~~~~~~~~l~~~G~~v~~~~~~ 102 (180)
.+...++.+.++|+++.++...
T Consensus 101 ~~~~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 101 ALYEFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred HHHHHHHHHHHhccCCCEEEEEcccc
Confidence 2345567778899999987654
No 180
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.00054 Score=49.69 Aligned_cols=63 Identities=19% Similarity=0.285 Sum_probs=45.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHc--CCCccEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWF--PQGIDIYFENVG 78 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~--~~~~d~~~d~~g 78 (180)
.+++++|+||+|++|...++.+...|++|+.++++.+. +.+++.+.+.... .+++|+++.+.|
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag 84 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAG 84 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 47899999999999999998888899999999887531 1222222222221 247899999887
No 181
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.46 E-value=0.00044 Score=50.47 Aligned_cols=37 Identities=24% Similarity=0.258 Sum_probs=32.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++++++|+||+|++|..+++.+...|++|+.++++.+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 40 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAA 40 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4789999999999999999888889999999887653
No 182
>PRK06196 oxidoreductase; Provisional
Probab=97.45 E-value=0.00052 Score=51.59 Aligned_cols=37 Identities=19% Similarity=0.213 Sum_probs=32.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.|.+++|+||+|++|..+++.+...|++|+.++++.+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~ 61 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPD 61 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4689999999999999988888888999999988754
No 183
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.45 E-value=0.00098 Score=49.53 Aligned_cols=85 Identities=20% Similarity=0.127 Sum_probs=59.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCC-------cch-HHHHHHhHcCCCccEEEeCCChhhH-HHHH
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKE-------EPD-LDAALKRWFPQGIDIYFENVGGKML-DAVL 86 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~-------~~~-~~~~~~~~~~~~~d~~~d~~g~~~~-~~~~ 86 (180)
.|++++|.| .|.+|..+++.++.+|++|++..++.++. ... ....+.+.. .++|+++.|+....+ ...+
T Consensus 150 ~gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l-~~aDiVint~P~~ii~~~~l 227 (287)
T TIGR02853 150 HGSNVMVLG-FGRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPFPLNKLEEKV-AEIDIVINTIPALVLTADVL 227 (287)
T ss_pred CCCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHh-ccCCEEEECCChHHhCHHHH
Confidence 578999999 79999999999999999999888876430 000 011122221 268999999976533 3456
Q ss_pred HhhccCCEEEEEeccc
Q 041355 87 LNMRLRGRIAVSSIIS 102 (180)
Q Consensus 87 ~~l~~~G~~v~~~~~~ 102 (180)
..++++..++.+++..
T Consensus 228 ~~~k~~aliIDlas~P 243 (287)
T TIGR02853 228 SKLPKHAVIIDLASKP 243 (287)
T ss_pred hcCCCCeEEEEeCcCC
Confidence 6788888888887644
No 184
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.00046 Score=50.49 Aligned_cols=37 Identities=24% Similarity=0.250 Sum_probs=33.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++.+++|+||+|++|..+++.+...|++|+.++++++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~ 44 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQE 44 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5789999999999999999988889999999988654
No 185
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.45 E-value=0.0019 Score=45.31 Aligned_cols=86 Identities=17% Similarity=0.209 Sum_probs=59.0
Q ss_pred HHcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCCCC-----------C-c-------chHHHHHHhHcCC
Q 041355 10 LVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEK-----------E-E-------PDLDAALKRWFPQ 68 (180)
Q Consensus 10 ~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g--~~vi~~~~~~~~-----------~-~-------~~~~~~~~~~~~~ 68 (180)
....+.++++++..| +|+ |.+++++++..+ .+|++++.+++. . . .+..+.+. ...+
T Consensus 34 ~~l~~~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~-~~~~ 110 (198)
T PRK00377 34 SKLRLRKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILF-TINE 110 (198)
T ss_pred HHcCCCCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHh-hcCC
Confidence 456788999999999 666 999999998764 489999998654 0 0 01111111 1224
Q ss_pred CccEEEeCCChh----hHHHHHHhhccCCEEEEE
Q 041355 69 GIDIYFENVGGK----MLDAVLLNMRLRGRIAVS 98 (180)
Q Consensus 69 ~~d~~~d~~g~~----~~~~~~~~l~~~G~~v~~ 98 (180)
.+|.++...+.. .+..+.+.|+|+|+++..
T Consensus 111 ~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 111 KFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred CCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 799998755432 566777889999998753
No 186
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.44 E-value=0.0005 Score=49.66 Aligned_cols=36 Identities=28% Similarity=0.363 Sum_probs=32.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.|++++|+||+|++|..+++.+...|++|+.++++.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~ 39 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE 39 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch
Confidence 478999999999999998888888899999988764
No 187
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.00045 Score=50.13 Aligned_cols=37 Identities=24% Similarity=0.252 Sum_probs=32.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.|++++|+||++++|..+++.+...|++|+.++++.+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 44 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLD 44 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4789999999999999999988889999999888754
No 188
>PRK06484 short chain dehydrogenase; Validated
Probab=97.44 E-value=0.0012 Score=52.99 Aligned_cols=89 Identities=18% Similarity=0.159 Sum_probs=60.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------------------CcchHHHHHHhHc--CCCccE
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------------------EEPDLDAALKRWF--PQGIDI 72 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------------------~~~~~~~~~~~~~--~~~~d~ 72 (180)
..|++++|+||++++|...++.+...|++|+.++++.++ +.+++...+.+.. .+.+|+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 357889999999999999998888899999999886442 1122222222221 147999
Q ss_pred EEeCCChh----h-----------------------HHHHHHhhccCCEEEEEecccc
Q 041355 73 YFENVGGK----M-----------------------LDAVLLNMRLRGRIAVSSIISQ 103 (180)
Q Consensus 73 ~~d~~g~~----~-----------------------~~~~~~~l~~~G~~v~~~~~~~ 103 (180)
++.+.|.. . ...+++.++.+|+++.+++..+
T Consensus 347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 404 (520)
T PRK06484 347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS 404 (520)
T ss_pred EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 99988731 0 1223344556789999877654
No 189
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.43 E-value=0.00052 Score=51.83 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=33.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK 53 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~ 53 (180)
.|.+++|+||++++|...++.+...|++|+.+++++++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~ 89 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDK 89 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHH
Confidence 58899999999999999888777789999999987653
No 190
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.00068 Score=48.74 Aligned_cols=37 Identities=24% Similarity=0.294 Sum_probs=32.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++.+++|+||+|++|...++.+...|++|++++++++
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~ 41 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQK 41 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChH
Confidence 4678999999999999999888889999999998764
No 191
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.00051 Score=50.62 Aligned_cols=37 Identities=27% Similarity=0.305 Sum_probs=32.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||+|++|...++.+...|++|++++++.+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~ 39 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEA 39 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHH
Confidence 3578999999999999999988888999999998654
No 192
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.00048 Score=50.57 Aligned_cols=36 Identities=14% Similarity=0.172 Sum_probs=31.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+.+++|+||+|++|..+++.+...|++|+.++++++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~ 40 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEA 40 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHH
Confidence 578999999999999998888888999998887654
No 193
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.00087 Score=48.69 Aligned_cols=37 Identities=22% Similarity=0.240 Sum_probs=32.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||++++|..+++.+...|++|++++++++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~ 43 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTD 43 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4678999999999999999998889999999887643
No 194
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.00084 Score=48.30 Aligned_cols=37 Identities=27% Similarity=0.351 Sum_probs=33.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++.+++|+||+|++|...++.+...|++|++++++.+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~ 44 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAA 44 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5688999999999999999999999999999988754
No 195
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.0006 Score=49.49 Aligned_cols=37 Identities=22% Similarity=0.346 Sum_probs=32.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||++++|...++.+...|++|+.++++++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~ 41 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQA 41 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4678999999999999998888888999999988754
No 196
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.39 E-value=0.00094 Score=48.80 Aligned_cols=63 Identities=17% Similarity=0.236 Sum_probs=45.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------------CcchHHHHHHhHc--CCCccEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------------EEPDLDAALKRWF--PQGIDIYFENVG 78 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------------~~~~~~~~~~~~~--~~~~d~~~d~~g 78 (180)
.+.+++|+||+|++|..+++.+...|++|+.++++... +.+++...+.+.. .+.+|+++.+.|
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag 86 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAG 86 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence 46789999999999999999998899999988877543 2222222222221 247899999887
No 197
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.39 E-value=0.00056 Score=49.66 Aligned_cols=36 Identities=19% Similarity=0.271 Sum_probs=31.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.|++++|+||++++|.++++.+...|++|+.+.+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~ 42 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE 42 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch
Confidence 478999999999999999998888999998887653
No 198
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.00065 Score=51.10 Aligned_cols=37 Identities=22% Similarity=0.253 Sum_probs=32.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.|.+++|+||++++|..+++.+...|++|+.++++.+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~ 49 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRA 49 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4789999999999999988888888999999998754
No 199
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0007 Score=49.11 Aligned_cols=37 Identities=16% Similarity=0.303 Sum_probs=32.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||+|++|..+++.+...|++|+.++++.+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~ 50 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED 50 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4779999999999999988888888999999888753
No 200
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.00066 Score=49.27 Aligned_cols=62 Identities=18% Similarity=0.244 Sum_probs=44.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-----------------CcchH--HHHHHhHcCCCccEEEeCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-----------------EEPDL--DAALKRWFPQGIDIYFENV 77 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-----------------~~~~~--~~~~~~~~~~~~d~~~d~~ 77 (180)
+.+++|+||+|++|..+++.+...|++|+++++++.. ...|+ .+.+.+...+++|++|.+.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 4689999999999999999999999999999886432 00011 1233333334799999988
Q ss_pred C
Q 041355 78 G 78 (180)
Q Consensus 78 g 78 (180)
|
T Consensus 82 g 82 (257)
T PRK09291 82 G 82 (257)
T ss_pred C
Confidence 7
No 201
>PRK06194 hypothetical protein; Provisional
Probab=97.37 E-value=0.00075 Score=49.90 Aligned_cols=37 Identities=14% Similarity=0.234 Sum_probs=31.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.++||+||+|++|..+++.+...|++|++++++.+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~ 41 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQD 41 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 3678999999999999999888888999998887643
No 202
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.37 E-value=0.0031 Score=45.58 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=29.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
+.+++|+||+|.+|...++-+...|++|+.+.++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~ 39 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKK 39 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999999888888899998777654
No 203
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0018 Score=47.58 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=29.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
+++|+||+|++|..+++.+...|++|+.+.+++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~ 34 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDA 34 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999999999999998888899998888765
No 204
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=97.36 E-value=0.0011 Score=44.62 Aligned_cols=62 Identities=23% Similarity=0.290 Sum_probs=47.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC----------------CcchHHHHHHhHcCC-CccEEEeCCCh
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----------------EEPDLDAALKRWFPQ-GIDIYFENVGG 79 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~----------------~~~~~~~~~~~~~~~-~~d~~~d~~g~ 79 (180)
.+|+|+||-|..|.++++..|..|+-|..++-++++ .++.+.+++.+...+ ++|.+|...|+
T Consensus 4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~CVAGG 82 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFCVAGG 82 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccccceEEecCCcchhHHHHHHHHHHHHhhcccccceEEEeecc
Confidence 468999999999999999999999988877776654 123344555555556 89999976664
No 205
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.35 E-value=0.0023 Score=45.13 Aligned_cols=84 Identities=10% Similarity=0.003 Sum_probs=53.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHH--H----HhHcC---CCccEEEeCCChhhHHHHH
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAA--L----KRWFP---QGIDIYFENVGGKMLDAVL 86 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~--~----~~~~~---~~~d~~~d~~g~~~~~~~~ 86 (180)
.|.+|+|.| +|.+|...++.+...|++|+++.+.....-.++.+. + +.... .++|+++-|++.+.++..+
T Consensus 9 ~~k~vLVIG-gG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~d~elN~~i 87 (202)
T PRK06718 9 SNKRVVIVG-GGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATNDPRVNEQV 87 (202)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCCCHHHHHHH
Confidence 578899999 799999988888888998888765321100111110 0 00111 2689999999988777666
Q ss_pred HhhccCCEEEEEec
Q 041355 87 LNMRLRGRIAVSSI 100 (180)
Q Consensus 87 ~~l~~~G~~v~~~~ 100 (180)
...+..+.++++..
T Consensus 88 ~~~a~~~~lvn~~d 101 (202)
T PRK06718 88 KEDLPENALFNVIT 101 (202)
T ss_pred HHHHHhCCcEEECC
Confidence 55545566666643
No 206
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.35 E-value=0.00074 Score=48.74 Aligned_cols=37 Identities=24% Similarity=0.343 Sum_probs=32.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||+|++|..+++.+...|++|+.++++++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~ 40 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEE 40 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4578999999999999988888888999999998864
No 207
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.0007 Score=49.07 Aligned_cols=37 Identities=16% Similarity=0.227 Sum_probs=32.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||+|++|..+++.+...|++|+.++++++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~ 42 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAA 42 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 4689999999999999988888888999999998754
No 208
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.35 E-value=0.00072 Score=49.10 Aligned_cols=37 Identities=19% Similarity=0.229 Sum_probs=32.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.|.+++|+||+|++|..+++.+...|++|+.+.++++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~ 45 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPA 45 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 4789999999999999999888888999998887754
No 209
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.00097 Score=48.55 Aligned_cols=40 Identities=23% Similarity=0.273 Sum_probs=34.7
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 13 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 13 ~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
..-++.+++|+||+|++|..+++.+...|++|+++.++++
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~ 46 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEA 46 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3357789999999999999999998889999999988654
No 210
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.00073 Score=49.00 Aligned_cols=36 Identities=22% Similarity=0.292 Sum_probs=32.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
|++++|+||++++|..+++.+...|++|++++++.+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~ 36 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKE 36 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 468999999999999999999889999999987654
No 211
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.00069 Score=48.87 Aligned_cols=36 Identities=11% Similarity=0.185 Sum_probs=32.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
++.+++|+||+|++|...++.+...|++|+.++++.
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~ 40 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDP 40 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCH
Confidence 467899999999999999999988999999988764
No 212
>PRK08643 acetoin reductase; Validated
Probab=97.33 E-value=0.00087 Score=48.65 Aligned_cols=36 Identities=17% Similarity=0.124 Sum_probs=32.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+++++|+||+|++|..+++.+...|++|+.++++.+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~ 37 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEE 37 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 578999999999999999988888999999988754
No 213
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.00074 Score=49.02 Aligned_cols=37 Identities=35% Similarity=0.362 Sum_probs=32.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++.+++|+||+|++|...++.+...|++|+.++++++
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~ 40 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAE 40 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 5688999999999999999988889999999988654
No 214
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.32 E-value=0.0015 Score=46.92 Aligned_cols=36 Identities=14% Similarity=0.087 Sum_probs=32.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+.+++|+||++++|...++.+...|++|+.++++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 37 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHY 37 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCch
Confidence 468999999999999999988889999999988764
No 215
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.32 E-value=0.00093 Score=48.58 Aligned_cols=37 Identities=19% Similarity=0.236 Sum_probs=33.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++.+++|+||+|++|..+++.+...|++|+.++++++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~ 42 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQD 42 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChH
Confidence 4789999999999999999999889999999888763
No 216
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.0011 Score=47.56 Aligned_cols=37 Identities=11% Similarity=0.231 Sum_probs=32.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.|.+++|+||++++|...+.-+...|++|+.+.++.+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~ 40 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQS 40 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4688999999999999988888888999998887654
No 217
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.31 E-value=0.0016 Score=43.96 Aligned_cols=95 Identities=17% Similarity=0.177 Sum_probs=56.1
Q ss_pred HHHHHHHcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC----CcchHH-HHHHhHcCCCccEEEeCCC
Q 041355 5 GNLIILVCS-PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----EEPDLD-AALKRWFPQGIDIYFENVG 78 (180)
Q Consensus 5 ~~~l~~~~~-~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~----~~~~~~-~~~~~~~~~~~d~~~d~~g 78 (180)
+.++.+..+ .-.|++++|.| -|-+|.-.++.++.+|++|+++...+-+ ..+.+. ..+.+.. ...|+++.+.|
T Consensus 10 ~d~i~r~t~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~-~~adi~vtaTG 87 (162)
T PF00670_consen 10 VDGIMRATNLMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEAL-RDADIFVTATG 87 (162)
T ss_dssp HHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHT-TT-SEEEE-SS
T ss_pred HHHHHhcCceeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHH-hhCCEEEECCC
Confidence 344445544 45899999999 9999999999999999999998886543 000000 0111111 25799999999
Q ss_pred hh-h-HHHHHHhhccCCEEEEEecc
Q 041355 79 GK-M-LDAVLLNMRLRGRIAVSSII 101 (180)
Q Consensus 79 ~~-~-~~~~~~~l~~~G~~v~~~~~ 101 (180)
.. . -..-+..++++.-+.+.|..
T Consensus 88 ~~~vi~~e~~~~mkdgail~n~Gh~ 112 (162)
T PF00670_consen 88 NKDVITGEHFRQMKDGAILANAGHF 112 (162)
T ss_dssp SSSSB-HHHHHHS-TTEEEEESSSS
T ss_pred CccccCHHHHHHhcCCeEEeccCcC
Confidence 76 2 35667788888777666543
No 218
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.31 E-value=0.00098 Score=48.36 Aligned_cols=37 Identities=14% Similarity=0.222 Sum_probs=32.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.++||+||+|++|...++.+...|++|+.++++++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~ 44 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAE 44 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 4778999999999999988888888999999888754
No 219
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.0018 Score=47.20 Aligned_cols=39 Identities=10% Similarity=0.035 Sum_probs=32.1
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCCC
Q 041355 14 PKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKE 52 (180)
Q Consensus 14 ~~~g~~vlI~Ga~g~vG~~~iqlak~~-g~~vi~~~~~~~ 52 (180)
+..+.+++|+||+|++|...++-+... |++|+.++++++
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~ 44 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDD 44 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcc
Confidence 456789999999999999988776666 589999988754
No 220
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.31 E-value=0.001 Score=48.34 Aligned_cols=35 Identities=26% Similarity=0.321 Sum_probs=30.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.|.+++|+||++++|...++.+...|++|+.+.++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~ 43 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIV 43 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCc
Confidence 47899999999999999999988899999887654
No 221
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.00085 Score=50.21 Aligned_cols=36 Identities=19% Similarity=0.170 Sum_probs=31.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.|.+++|+||+|++|..+++.+...|++|+.++++.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~ 50 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNL 50 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 578999999999999998888888899999888764
No 222
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0039 Score=45.15 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=29.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG 49 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~ 49 (180)
.+.+++|+||++++|.++++.+...|++|+.+.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~ 36 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYG 36 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcC
Confidence 4678999999999999999999889999887653
No 223
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.00085 Score=48.92 Aligned_cols=36 Identities=25% Similarity=0.332 Sum_probs=31.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+.+++|+||+|++|..+++.+...|++|+.+++++.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~ 36 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNET 36 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 357999999999999999988888999999988753
No 224
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0011 Score=48.08 Aligned_cols=37 Identities=19% Similarity=0.165 Sum_probs=32.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.|.+++|+||+|++|...++.+...|++|++++++++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~ 42 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAP 42 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChh
Confidence 4678999999999999988888888999888887664
No 225
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0011 Score=48.41 Aligned_cols=39 Identities=31% Similarity=0.297 Sum_probs=33.2
Q ss_pred CCCCCEEEEecCCc-hHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 14 PKKGEYVYVSAASG-AVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 14 ~~~g~~vlI~Ga~g-~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+.++++++|+||+| ++|.++++.+...|++|++++++++
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~ 53 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHER 53 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 44678999999986 8999999999999999998877653
No 226
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.001 Score=48.07 Aligned_cols=37 Identities=24% Similarity=0.284 Sum_probs=32.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||+|++|..+++.+...|++|+.+.++++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~ 41 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAE 41 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4678999999999999988888888999999988753
No 227
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0009 Score=49.35 Aligned_cols=36 Identities=19% Similarity=0.199 Sum_probs=31.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.|.+++|+||+|++|..+++.+...|++|+.++++.
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~ 40 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDK 40 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 477899999999999999988888999999887764
No 228
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0011 Score=48.91 Aligned_cols=37 Identities=22% Similarity=0.233 Sum_probs=32.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||+|.+|...++.+...|++|++++++.+
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~ 38 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPE 38 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 3568999999999999999888888999999987643
No 229
>PRK08589 short chain dehydrogenase; Validated
Probab=97.28 E-value=0.0011 Score=48.68 Aligned_cols=35 Identities=20% Similarity=0.278 Sum_probs=31.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.|.+++|+||++++|...++.+...|++|++++++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~ 39 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA 39 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 47799999999999999888888889999999887
No 230
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.27 E-value=0.0026 Score=43.63 Aligned_cols=85 Identities=16% Similarity=0.165 Sum_probs=58.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-Cc-chH---HHHHHhHc---C--CCccEEEeCCChh--------
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-EE-PDL---DAALKRWF---P--QGIDIYFENVGGK-------- 80 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-~~-~~~---~~~~~~~~---~--~~~d~~~d~~g~~-------- 80 (180)
+|.|.||+|-+|...++-|+..|-+|.+++|++++ .. +.. ...+.+.+ . .++|+|+++.|..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~~~~ 81 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDNDELH 81 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhhhHhhhcCCceEEEeccCCCCChhHHH
Confidence 58899999999999999999999999999999887 11 111 11111111 1 2799999998743
Q ss_pred --hHHHHHHhhccC--CEEEEEecccc
Q 041355 81 --MLDAVLLNMRLR--GRIAVSSIISQ 103 (180)
Q Consensus 81 --~~~~~~~~l~~~--G~~v~~~~~~~ 103 (180)
..+.++..|+.- -|+..+|..++
T Consensus 82 ~k~~~~li~~l~~agv~RllVVGGAGS 108 (211)
T COG2910 82 SKSIEALIEALKGAGVPRLLVVGGAGS 108 (211)
T ss_pred HHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence 133455666653 47777776553
No 231
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.27 E-value=0.0012 Score=47.37 Aligned_cols=37 Identities=24% Similarity=0.307 Sum_probs=32.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++.+++|+||+|.+|...++.+...|.+|+.+++++.
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~ 40 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEE 40 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 3578999999999999999988888999999988754
No 232
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.27 E-value=0.0011 Score=48.32 Aligned_cols=36 Identities=17% Similarity=0.224 Sum_probs=31.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
+|++++|+||++++|..+++.+...|++|+.+.+++
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~ 42 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSN 42 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 578999999999999999988888999998876543
No 233
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.001 Score=48.40 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=32.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+++++|+||++++|..+++.+...|++|+.++++++
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~ 42 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAA 42 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4678999999999999999988889999999888643
No 234
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.26 E-value=0.0012 Score=48.03 Aligned_cols=35 Identities=17% Similarity=0.201 Sum_probs=31.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.|.++||+||++++|...++.+...|++|+.++++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG 48 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999999999888899999988876
No 235
>PRK08017 oxidoreductase; Provisional
Probab=97.26 E-value=0.0013 Score=47.67 Aligned_cols=36 Identities=17% Similarity=0.227 Sum_probs=31.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK 53 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~ 53 (180)
++++|+||+|++|..+++.+...|++|++++++.++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~ 38 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDD 38 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 579999999999999999999899999999887653
No 236
>PRK05717 oxidoreductase; Validated
Probab=97.26 E-value=0.0011 Score=48.25 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=31.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.|.+++|+||+|++|..++..+...|++|+.++++.
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~ 44 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDR 44 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCH
Confidence 478899999999999998888888899999887664
No 237
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.001 Score=48.17 Aligned_cols=37 Identities=22% Similarity=0.378 Sum_probs=32.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||+|++|...++.+...|++|+.++++.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~ 43 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLD 43 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3578999999999999999999889999999988643
No 238
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.26 E-value=0.00095 Score=48.15 Aligned_cols=37 Identities=16% Similarity=0.226 Sum_probs=32.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||+|.+|..+++.+...|++|++++++.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~ 41 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGD 41 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4678999999999999998888888999999998743
No 239
>PRK12743 oxidoreductase; Provisional
Probab=97.24 E-value=0.0015 Score=47.52 Aligned_cols=35 Identities=14% Similarity=0.148 Sum_probs=30.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
+++++|+||++++|..+++.+...|++|+.+.+++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~ 36 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSD 36 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCC
Confidence 56899999999999999999988999998876543
No 240
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0011 Score=47.52 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=32.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||+|.+|..+++.+...|++|++++++++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~ 41 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQK 41 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHH
Confidence 4688999999999999988888778999999988654
No 241
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.24 E-value=0.0012 Score=47.78 Aligned_cols=37 Identities=24% Similarity=0.270 Sum_probs=32.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||+|.+|...++.+...|++|+.++++++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~ 39 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDE 39 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4578999999999999988888888999999988755
No 242
>PLN02253 xanthoxin dehydrogenase
Probab=97.23 E-value=0.0011 Score=48.80 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=31.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.|.+++|+||+|++|..+++.+...|++|+.+++++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~ 52 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQD 52 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 467899999999999998888888899999988754
No 243
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.23 E-value=0.0015 Score=47.51 Aligned_cols=36 Identities=17% Similarity=0.243 Sum_probs=30.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.|.+++|+||+|++|...++.+...|++|+.+.++.
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~ 41 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA 41 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence 468899999999999999988888899988876653
No 244
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0017 Score=47.32 Aligned_cols=37 Identities=22% Similarity=0.335 Sum_probs=32.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|.|+++++|...++.+...|++|+.++++.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~ 42 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDAD 42 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 4789999999999999999888889999999988754
No 245
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.23 E-value=0.0037 Score=47.06 Aligned_cols=77 Identities=19% Similarity=0.247 Sum_probs=50.0
Q ss_pred hHHHHHHHHcCC---CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC--------Cc--chHHHHHHhHcCC
Q 041355 3 IVGNLIILVCSP---KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK--------EE--PDLDAALKRWFPQ 68 (180)
Q Consensus 3 ~a~~~l~~~~~~---~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~--------~~--~~~~~~~~~~~~~ 68 (180)
++++++...... -++.+|+|.| +|.+|..+++.++..|+ +|+++.++.++ .. ..+ +.+.+.. .
T Consensus 161 v~~~Av~~a~~~~~~l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~-~~~~~~l-~ 237 (311)
T cd05213 161 ISSAAVELAEKIFGNLKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPL-DELLELL-N 237 (311)
T ss_pred HHHHHHHHHHHHhCCccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeH-HHHHHHH-h
Confidence 455565322221 3789999999 79999999999998876 77778776553 00 011 1111211 2
Q ss_pred CccEEEeCCChhhH
Q 041355 69 GIDIYFENVGGKML 82 (180)
Q Consensus 69 ~~d~~~d~~g~~~~ 82 (180)
..|++|.|++.+..
T Consensus 238 ~aDvVi~at~~~~~ 251 (311)
T cd05213 238 EADVVISATGAPHY 251 (311)
T ss_pred cCCEEEECCCCCch
Confidence 57999999997743
No 246
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.22 E-value=0.0013 Score=48.50 Aligned_cols=37 Identities=22% Similarity=0.296 Sum_probs=32.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||+|++|...++.+...|++|+.++++.+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~ 45 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQE 45 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4788999999999999999988889999999888653
No 247
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.22 E-value=0.0011 Score=48.15 Aligned_cols=37 Identities=30% Similarity=0.306 Sum_probs=32.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++.+++|+||+|++|...++.+...|++|+.++++.+
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~ 47 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAE 47 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 4788999999999999999888889999999888654
No 248
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0012 Score=47.63 Aligned_cols=37 Identities=22% Similarity=0.320 Sum_probs=32.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++.+++|+||+|++|...++.+...|++|+.++++.+
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~ 40 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAE 40 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHH
Confidence 4678999999999999988877778999999988754
No 249
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.21 E-value=0.0013 Score=49.69 Aligned_cols=37 Identities=19% Similarity=0.182 Sum_probs=32.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||+|++|..+++.+...|++|+.++++.+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~ 41 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLK 41 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4678999999999999998888888999999987643
No 250
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.19 E-value=0.0014 Score=47.64 Aligned_cols=36 Identities=31% Similarity=0.302 Sum_probs=31.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.+.+++|+||+|++|..+++.+...|++|+.+++++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~ 42 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE 42 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch
Confidence 467899999999999999998888899999888763
No 251
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.18 E-value=0.0044 Score=45.86 Aligned_cols=76 Identities=20% Similarity=0.135 Sum_probs=59.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhh-HHHHHHhhccCCE
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKM-LDAVLLNMRLRGR 94 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~-~~~~~~~l~~~G~ 94 (180)
.|.+++|.|++.-+|.-+.+++...|++|+++.+. ..++.+.+++ .|+++-++|.+. +.. ..++++..
T Consensus 157 ~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~----t~~l~~~~~~-----ADIVIsAvg~p~~i~~--~~vk~gav 225 (286)
T PRK14175 157 EGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR----SKDMASYLKD-----ADVIVSAVGKPGLVTK--DVVKEGAV 225 (286)
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC----chhHHHHHhh-----CCEEEECCCCCcccCH--HHcCCCcE
Confidence 78999999977779999999999999999987763 2334444443 799999999873 333 46788888
Q ss_pred EEEEeccc
Q 041355 95 IAVSSIIS 102 (180)
Q Consensus 95 ~v~~~~~~ 102 (180)
++.+|...
T Consensus 226 VIDvGi~~ 233 (286)
T PRK14175 226 IIDVGNTP 233 (286)
T ss_pred EEEcCCCc
Confidence 88888754
No 252
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.18 E-value=0.0014 Score=47.06 Aligned_cols=37 Identities=22% Similarity=0.253 Sum_probs=32.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|.||+|++|..++..+...|++|+.++++++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~ 42 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEE 42 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3578999999999999998888889999999988754
No 253
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.18 E-value=0.0014 Score=47.50 Aligned_cols=37 Identities=16% Similarity=0.217 Sum_probs=32.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+|.+++|+||++++|...++.+...|++|+.++++++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~ 46 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAA 46 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHH
Confidence 5889999999999999988888888999999988754
No 254
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0015 Score=47.03 Aligned_cols=38 Identities=18% Similarity=0.152 Sum_probs=33.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
..+.+++|.||+|++|..++..+...|++|++++++++
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~ 41 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQD 41 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45678999999999999999998889999999988754
No 255
>PRK09186 flagellin modification protein A; Provisional
Probab=97.17 E-value=0.0016 Score=47.17 Aligned_cols=36 Identities=25% Similarity=0.367 Sum_probs=32.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.+.+++|+||+|++|...+..+...|++|+.+++++
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~ 38 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDK 38 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCh
Confidence 478899999999999999888888999999988764
No 256
>PRK07578 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0099 Score=41.47 Aligned_cols=59 Identities=22% Similarity=0.194 Sum_probs=40.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-----CcchHHHHHHhHcCCCccEEEeCCCh
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-----EEPDLDAALKRWFPQGIDIYFENVGG 79 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-----~~~~~~~~~~~~~~~~~d~~~d~~g~ 79 (180)
+++|+||++++|..++..+... .+|+.++++... .+++-.+.+.+.. +++|+++.+.|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~~~~D~~~~~~~~~~~~~~-~~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGDVQVDITDPASIRALFEKV-GKVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCceEecCCChHHHHHHHHhc-CCCCEEEECCCC
Confidence 5899999999999877766655 889998887643 2222222222222 479999988873
No 257
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.16 E-value=0.0016 Score=47.40 Aligned_cols=37 Identities=19% Similarity=0.245 Sum_probs=32.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||+|++|..+++.+...|++|+.++++.+
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~ 41 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPA 41 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 3678999999999999999998888999999888765
No 258
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0015 Score=47.95 Aligned_cols=37 Identities=16% Similarity=0.153 Sum_probs=32.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++.+++|+||+|++|..+++.+...|++|+.++++.+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~ 42 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPD 42 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4689999999999999999999889999999988643
No 259
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0022 Score=47.61 Aligned_cols=37 Identities=24% Similarity=0.241 Sum_probs=31.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
-+|.+++|+||++++|...++.+...|++|+.++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCc
Confidence 3578999999999999998888888899998887654
No 260
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0019 Score=47.15 Aligned_cols=37 Identities=27% Similarity=0.372 Sum_probs=32.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++.+++|+||+|++|...++.+...|++|++++++++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~ 40 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAE 40 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4678999999999999988888888999999988754
No 261
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.14 E-value=0.0015 Score=47.64 Aligned_cols=34 Identities=32% Similarity=0.271 Sum_probs=30.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+++|+||++++|..+++.+...|++|+.++++++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~ 35 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEE 35 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 5899999999999988888888999999888743
No 262
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.13 E-value=0.0019 Score=47.76 Aligned_cols=38 Identities=32% Similarity=0.471 Sum_probs=33.0
Q ss_pred CCCCEEEEecCCchHHHH-HHHHHHHcCCEEEEEeCCCCC
Q 041355 15 KKGEYVYVSAASGAVGQL-VGQFAKLAGCYVVGSAGSKEK 53 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~-~iqlak~~g~~vi~~~~~~~~ 53 (180)
+-|++.+|+||+.++|.. +-++|| .|.+|+.+.|+.++
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~K 85 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEK 85 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHH
Confidence 457899999999999976 777777 99999999999886
No 263
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0018 Score=47.12 Aligned_cols=36 Identities=19% Similarity=0.196 Sum_probs=31.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+.+++|+||+|++|..+++.+...|++|+.++++++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~ 37 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTD 37 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 468999999999999988888888999999887643
No 264
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0025 Score=46.40 Aligned_cols=35 Identities=11% Similarity=0.228 Sum_probs=30.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++++|+||+|++|..+++.+...|++|+.++++.+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~ 36 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEA 36 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46999999999999999888888999999887654
No 265
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.12 E-value=0.0041 Score=46.98 Aligned_cols=87 Identities=18% Similarity=0.159 Sum_probs=58.7
Q ss_pred HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCCCC-----------Ccc--hH-HHHHHhHc-C-CCcc
Q 041355 10 LVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEK-----------EEP--DL-DAALKRWF-P-QGID 71 (180)
Q Consensus 10 ~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~--~vi~~~~~~~~-----------~~~--~~-~~~~~~~~-~-~~~d 71 (180)
+...++++++||..| +| .|..++.+++..+. .|++++.+++. ... .+ .....+.. . +.+|
T Consensus 74 ~~L~i~~g~~VLDIG-~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~~~~fD 151 (322)
T PRK13943 74 EWVGLDKGMRVLEIG-GG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPEFAPYD 151 (322)
T ss_pred HhcCCCCCCEEEEEe-CC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccccCCcc
Confidence 445678999999999 55 59999999998764 68888887653 000 00 00011111 1 3699
Q ss_pred EEEeCCChh-hHHHHHHhhccCCEEEEE
Q 041355 72 IYFENVGGK-MLDAVLLNMRLRGRIAVS 98 (180)
Q Consensus 72 ~~~d~~g~~-~~~~~~~~l~~~G~~v~~ 98 (180)
+|+.+.+.. .....++.|+++|+++..
T Consensus 152 ~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 152 VIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred EEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 999888755 445677899999998764
No 266
>PRK09242 tropinone reductase; Provisional
Probab=97.12 E-value=0.0017 Score=47.13 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=32.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.|.+++|+||+|++|..+++.+...|++|+.++++.+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~ 44 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDAD 44 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 4789999999999999999998889999999887653
No 267
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.12 E-value=0.0057 Score=43.21 Aligned_cols=84 Identities=20% Similarity=0.149 Sum_probs=54.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHH--H----HhHcC---CCccEEEeCCChhhHH-HH
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAA--L----KRWFP---QGIDIYFENVGGKMLD-AV 85 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~--~----~~~~~---~~~d~~~d~~g~~~~~-~~ 85 (180)
.|.+|+|.| .|.+|..-++.+...|++|.+++......-..+.+. + ++... .++++++-|.+.+..+ .+
T Consensus 8 ~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at~d~~ln~~i 86 (205)
T TIGR01470 8 EGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDADILEGAFLVIAATDDEELNRRV 86 (205)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECCCCHHHHHHH
Confidence 467999999 899999999999999999988876533100011100 0 00011 2689999999987444 44
Q ss_pred HHhhccCCEEEEEec
Q 041355 86 LLNMRLRGRIAVSSI 100 (180)
Q Consensus 86 ~~~l~~~G~~v~~~~ 100 (180)
....+..|..+++..
T Consensus 87 ~~~a~~~~ilvn~~d 101 (205)
T TIGR01470 87 AHAARARGVPVNVVD 101 (205)
T ss_pred HHHHHHcCCEEEECC
Confidence 455667787776643
No 268
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.002 Score=46.80 Aligned_cols=36 Identities=22% Similarity=0.211 Sum_probs=31.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+.+++|+||+|++|...+..+...|++|+.++++.+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~ 37 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAA 37 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 468999999999999988888788999999888754
No 269
>PRK09135 pteridine reductase; Provisional
Probab=97.11 E-value=0.0024 Score=45.96 Aligned_cols=36 Identities=11% Similarity=0.160 Sum_probs=31.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.+.+++|+||+|.+|..+++.+...|++|+.++++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~ 40 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRS 40 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 467899999999999998888888899999998763
No 270
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.11 E-value=0.0017 Score=46.79 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=32.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++.++||+||+|.+|..+++.+...|++|+.++++.+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~ 38 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNRE 38 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH
Confidence 4678999999999999999988888999998887653
No 271
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.10 E-value=0.0025 Score=46.45 Aligned_cols=36 Identities=19% Similarity=0.169 Sum_probs=31.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.+.+++|+||+|++|..+++.+...|++|+.+.+++
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~ 41 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSD 41 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC
Confidence 578999999999999999999989999988877754
No 272
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.10 E-value=0.002 Score=46.79 Aligned_cols=37 Identities=22% Similarity=0.287 Sum_probs=32.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||++++|..++..+...|++|+.++++.+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~ 46 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINAD 46 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4789999999999999999888888999998887643
No 273
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.10 E-value=0.0012 Score=41.54 Aligned_cols=81 Identities=21% Similarity=0.251 Sum_probs=52.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCCCC---CcchH-----H-------HHH--HhHcCCCccEEEeCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAK-LAGCYVVGSAGSKEK---EEPDL-----D-------AAL--KRWFPQGIDIYFENV 77 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak-~~g~~vi~~~~~~~~---~~~~~-----~-------~~~--~~~~~~~~d~~~d~~ 77 (180)
||.+||-.| +| .|..++.+++ ..+++|++++.+++. -.... . ..+ .....++||+++...
T Consensus 1 p~~~vLDlG-cG-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~ 78 (112)
T PF12847_consen 1 PGGRVLDLG-CG-TGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSG 78 (112)
T ss_dssp TTCEEEEET-TT-TSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECS
T ss_pred CCCEEEEEc-Cc-CCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECC
Confidence 688999898 44 4888888888 468899999998664 00000 0 011 111123799998766
Q ss_pred -Chh----------hHHHHHHhhccCCEEEEE
Q 041355 78 -GGK----------MLDAVLLNMRLRGRIAVS 98 (180)
Q Consensus 78 -g~~----------~~~~~~~~l~~~G~~v~~ 98 (180)
... .+..+.+.|+|+|+++..
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 79 FTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp GSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 221 267777899999998753
No 274
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.09 E-value=0.0014 Score=48.40 Aligned_cols=90 Identities=26% Similarity=0.356 Sum_probs=52.7
Q ss_pred HHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------CcchHH-------HHHHhHcCCCcc
Q 041355 7 LIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------EEPDLD-------AALKRWFPQGID 71 (180)
Q Consensus 7 ~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------~~~~~~-------~~~~~~~~~~~d 71 (180)
.+.+..++++|++||-.| +| -|-.++.+++.+|++|+++..+++. ....+. ...++ ..+.||
T Consensus 53 ~~~~~~~l~~G~~vLDiG-cG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~-~~~~fD 129 (273)
T PF02353_consen 53 LLCEKLGLKPGDRVLDIG-CG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRD-LPGKFD 129 (273)
T ss_dssp HHHTTTT--TT-EEEEES--T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG----S-S
T ss_pred HHHHHhCCCCCCEEEEeC-CC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeeccc-cCCCCC
Confidence 345777899999999999 66 6888889999999999999988764 000000 01111 122688
Q ss_pred EEEe-----CCChh----hHHHHHHhhccCCEEEEEe
Q 041355 72 IYFE-----NVGGK----MLDAVLLNMRLRGRIAVSS 99 (180)
Q Consensus 72 ~~~d-----~~g~~----~~~~~~~~l~~~G~~v~~~ 99 (180)
.|+. .+|.+ .+..+-+.|+|+|+++.-.
T Consensus 130 ~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~ 166 (273)
T PF02353_consen 130 RIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT 166 (273)
T ss_dssp EEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred EEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence 7643 34432 3667778999999987543
No 275
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.09 E-value=0.0023 Score=46.81 Aligned_cols=37 Identities=24% Similarity=0.286 Sum_probs=32.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||++++|..++..+...|++|+.+.++++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~ 45 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQE 45 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5678999999999999888877788999998887754
No 276
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0021 Score=46.37 Aligned_cols=36 Identities=14% Similarity=0.138 Sum_probs=30.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+.+++|+||+|++|...++.+...|++|+.++++++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~ 37 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTD 37 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 568999999999999888777778999998887653
No 277
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0017 Score=47.23 Aligned_cols=37 Identities=16% Similarity=0.247 Sum_probs=32.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~-vi~~~~~~~ 52 (180)
.+.+++|+||+|++|..+++.+...|++ |+.++++.+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~ 42 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAE 42 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHH
Confidence 5678999999999999999999889997 888887654
No 278
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.002 Score=47.38 Aligned_cols=36 Identities=22% Similarity=0.215 Sum_probs=31.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+.+++|+||+|++|..+++.+...|++|+.++++.+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~ 38 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTA 38 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHH
Confidence 468999999999999988888778999999888753
No 279
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.07 E-value=0.0053 Score=43.15 Aligned_cols=88 Identities=19% Similarity=0.251 Sum_probs=61.6
Q ss_pred HHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHh----------------HcC-CCcc
Q 041355 9 ILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKR----------------WFP-QGID 71 (180)
Q Consensus 9 ~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~----------------~~~-~~~d 71 (180)
.+...+++|++||-.| ++.|+.+.-+++..+ +|+.+.+.++-- +.-..++.. +.. +.||
T Consensus 65 ~~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~-~~A~~~L~~lg~~nV~v~~gDG~~G~~~~aPyD 140 (209)
T COG2518 65 LQLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELA-EQARRNLETLGYENVTVRHGDGSKGWPEEAPYD 140 (209)
T ss_pred HHHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHH-HHHHHHHHHcCCCceEEEECCcccCCCCCCCcC
Confidence 3666889999999998 346999999999988 899888865420 000001111 111 2689
Q ss_pred EEEeCCChhhH-HHHHHhhccCCEEEEEec
Q 041355 72 IYFENVGGKML-DAVLLNMRLRGRIAVSSI 100 (180)
Q Consensus 72 ~~~d~~g~~~~-~~~~~~l~~~G~~v~~~~ 100 (180)
.|+-+.+.+.. ...+..|+++|+++....
T Consensus 141 ~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 141 RIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred EEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 99888877755 566799999999988754
No 280
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.07 E-value=0.0023 Score=46.48 Aligned_cols=36 Identities=14% Similarity=0.091 Sum_probs=31.8
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+++++|+||+|++|...++.+...|++|+.++++.+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~ 37 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSE 37 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 568999999999999999888888999999988654
No 281
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0021 Score=46.87 Aligned_cols=36 Identities=14% Similarity=0.172 Sum_probs=32.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
++.+++|+||+|++|...++.+...|++|+.++++.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~ 40 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISP 40 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCH
Confidence 468899999999999999988888899999988765
No 282
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.06 E-value=0.0031 Score=45.29 Aligned_cols=37 Identities=27% Similarity=0.359 Sum_probs=31.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||+|.+|...+..+...|++|+++.+++.
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~ 40 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSE 40 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCch
Confidence 3568999999999999999999888999877766543
No 283
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0019 Score=47.50 Aligned_cols=35 Identities=14% Similarity=0.175 Sum_probs=30.6
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.++||+||+|.+|..+++.+...|++|++++++.+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~ 37 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPD 37 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 57999999999999988888888999999888653
No 284
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.05 E-value=0.0022 Score=42.16 Aligned_cols=63 Identities=19% Similarity=0.180 Sum_probs=43.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCCCcchHHHHHH----------hHc--CCCccEEEeCCChh
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKEEPDLDAALK----------RWF--PQGIDIYFENVGGK 80 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~~~~~~~~~~~----------~~~--~~~~d~~~d~~g~~ 80 (180)
.+.+++|.| +|++|.+++..+...|+ +|+.+.|+.++ .+++.+.+. +.. -..+|+++.|++..
T Consensus 11 ~~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~r-a~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 11 KGKRVLVIG-AGGAARAVAAALAALGAKEITIVNRTPER-AEALAEEFGGVNIEAIPLEDLEEALQEADIVINATPSG 86 (135)
T ss_dssp TTSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEESSHHH-HHHHHHHHTGCSEEEEEGGGHCHHHHTESEEEE-SSTT
T ss_pred CCCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECCHHH-HHHHHHHcCccccceeeHHHHHHHHhhCCeEEEecCCC
Confidence 588999999 79999999999999999 58888887553 122222220 000 01589999988754
No 285
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.04 E-value=0.0052 Score=47.75 Aligned_cols=37 Identities=32% Similarity=0.312 Sum_probs=32.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
..+.+|+|+||+|.+|..+++.+...|.+|++++++.
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~ 94 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREK 94 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEech
Confidence 4567899999999999999998888899999998865
No 286
>PRK06720 hypothetical protein; Provisional
Probab=97.04 E-value=0.0032 Score=43.06 Aligned_cols=36 Identities=14% Similarity=0.188 Sum_probs=31.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.|..++|.||++++|...+..+...|++|+.++++.
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~ 50 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQ 50 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCH
Confidence 578899999999999998888878899999888754
No 287
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0036 Score=46.07 Aligned_cols=36 Identities=22% Similarity=0.358 Sum_probs=31.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.+.+++|+||+|++|..+++.+...|++|++++++.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTA 40 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeccc
Confidence 467899999999999998888888899999998864
No 288
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.04 E-value=0.0021 Score=46.72 Aligned_cols=35 Identities=17% Similarity=0.136 Sum_probs=30.6
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCC
Q 041355 16 KGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~--g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.|++++|+||+ +++|.++++.+...|++|+.++++
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~ 42 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN 42 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc
Confidence 57899999998 799999888888889999988775
No 289
>PRK08264 short chain dehydrogenase; Validated
Probab=97.03 E-value=0.0049 Score=44.17 Aligned_cols=37 Identities=27% Similarity=0.327 Sum_probs=32.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~ 52 (180)
.+.+++|+||+|.+|..+++.+...|+ +|+.+.++.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~ 42 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPE 42 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChh
Confidence 467899999999999999999988999 9998888654
No 290
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0038 Score=44.39 Aligned_cols=35 Identities=20% Similarity=0.252 Sum_probs=30.1
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+++|+||+|++|...++.+...|++|+.++++.+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~ 36 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAA 36 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHH
Confidence 46899999999999988888778999999887744
No 291
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.02 E-value=0.0032 Score=45.41 Aligned_cols=34 Identities=26% Similarity=0.413 Sum_probs=29.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG 49 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~ 49 (180)
.+.+++|+||+|++|...++.+...|++|+...+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~ 35 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCG 35 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcC
Confidence 3678999999999999999999889998887554
No 292
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.02 E-value=0.0034 Score=45.36 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=29.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
+.+++|+||+|++|...+..+...|++|+.++++
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~ 38 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQ 38 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCC
Confidence 5789999999999999998888889998876653
No 293
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.01 E-value=0.006 Score=47.29 Aligned_cols=92 Identities=22% Similarity=0.178 Sum_probs=61.9
Q ss_pred HHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------CcchH---HHHHHhHcCCCccEEE
Q 041355 6 NLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------EEPDL---DAALKRWFPQGIDIYF 74 (180)
Q Consensus 6 ~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------~~~~~---~~~~~~~~~~~~d~~~ 74 (180)
..+.+...+++|++||-.| + +.|..+..+++..|++|++++.+++. ....+ ...... ..+.||.|+
T Consensus 157 ~~l~~~l~l~~g~rVLDIG-c-G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~~-l~~~fD~Iv 233 (383)
T PRK11705 157 DLICRKLQLKPGMRVLDIG-C-GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYRD-LNGQFDRIV 233 (383)
T ss_pred HHHHHHhCCCCCCEEEEeC-C-CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECchhh-cCCCCCEEE
Confidence 3455667789999999998 5 47888899999889999999988664 00000 000111 134688886
Q ss_pred eC-----CCh----hhHHHHHHhhccCCEEEEEec
Q 041355 75 EN-----VGG----KMLDAVLLNMRLRGRIAVSSI 100 (180)
Q Consensus 75 d~-----~g~----~~~~~~~~~l~~~G~~v~~~~ 100 (180)
.. +|. ..+..+.+.|+|+|.++....
T Consensus 234 s~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~i 268 (383)
T PRK11705 234 SVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHTI 268 (383)
T ss_pred EeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 42 342 246777789999999987643
No 294
>PRK06484 short chain dehydrogenase; Validated
Probab=97.01 E-value=0.0023 Score=51.49 Aligned_cols=38 Identities=29% Similarity=0.319 Sum_probs=33.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK 53 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~ 53 (180)
+|++++|+||++++|...++.+...|++|+.++++.++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~ 41 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVER 41 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 57899999999999999999998899999999886553
No 295
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.01 E-value=0.016 Score=39.64 Aligned_cols=78 Identities=19% Similarity=0.099 Sum_probs=54.4
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHhhccCCE
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGR 94 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~ 94 (180)
-.|.+|+|.|++..+|..+++.++..|++|+.+.++. +++.+.+. .+|++|.|++.+.+ --...++++-.
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~----~~l~~~l~-----~aDiVIsat~~~~i-i~~~~~~~~~v 111 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT----KNLKEHTK-----QADIVIVAVGKPGL-VKGDMVKPGAV 111 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc----hhHHHHHh-----hCCEEEEcCCCCce-ecHHHccCCeE
Confidence 4789999999544579999999999999888777752 23333343 37999999998632 11134666666
Q ss_pred EEEEeccc
Q 041355 95 IAVSSIIS 102 (180)
Q Consensus 95 ~v~~~~~~ 102 (180)
++.++.+.
T Consensus 112 iIDla~pr 119 (168)
T cd01080 112 VIDVGINR 119 (168)
T ss_pred EEEccCCC
Confidence 77776654
No 296
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.99 E-value=0.0025 Score=46.10 Aligned_cols=34 Identities=21% Similarity=0.297 Sum_probs=30.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+++|+||+|++|...+..+...|++|++++++++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~ 35 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQE 35 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHH
Confidence 6899999999999999988888999999988754
No 297
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.98 E-value=0.0028 Score=46.68 Aligned_cols=36 Identities=6% Similarity=0.059 Sum_probs=30.8
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASG--AVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g--~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.|++++|+||++ ++|.++++.+...|++|+.+++++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~ 43 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGE 43 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCch
Confidence 478899999886 999998888888999999887653
No 298
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.98 E-value=0.0036 Score=45.24 Aligned_cols=64 Identities=20% Similarity=0.285 Sum_probs=45.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------------CcchHHHHHHhHc--CCCccEEEeCCCh
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------------EEPDLDAALKRWF--PQGIDIYFENVGG 79 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------------~~~~~~~~~~~~~--~~~~d~~~d~~g~ 79 (180)
++++++|+||+|.+|...++.+...|++|++++++... +.+.+.+.+.+.. .+.+|+++.+.|.
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~ 86 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGI 86 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 46789999999999999999888889999999886611 2222222222221 1468999998874
No 299
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.97 E-value=0.003 Score=49.60 Aligned_cols=75 Identities=20% Similarity=0.298 Sum_probs=50.5
Q ss_pred hHHHHHHHHcC---CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCCCcchHH----------HHHHhHcCC
Q 041355 3 IVGNLIILVCS---PKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKEEPDLD----------AALKRWFPQ 68 (180)
Q Consensus 3 ~a~~~l~~~~~---~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~~~~~~~----------~~~~~~~~~ 68 (180)
+++.++..... -.++.+|+|.| +|.+|.++++.++..|+ +|+++.++.++ ...+. +.+.+.. .
T Consensus 165 v~~~Av~~a~~~~~~~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~r-a~~la~~~g~~~~~~~~~~~~l-~ 241 (423)
T PRK00045 165 VASAAVELAKQIFGDLSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLER-AEELAEEFGGEAIPLDELPEAL-A 241 (423)
T ss_pred HHHHHHHHHHHhhCCccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHH-HHHHHHHcCCcEeeHHHHHHHh-c
Confidence 45666633322 25789999999 79999999999999998 78888777554 00111 1111111 2
Q ss_pred CccEEEeCCChh
Q 041355 69 GIDIYFENVGGK 80 (180)
Q Consensus 69 ~~d~~~d~~g~~ 80 (180)
++|++|.|++.+
T Consensus 242 ~aDvVI~aT~s~ 253 (423)
T PRK00045 242 EADIVISSTGAP 253 (423)
T ss_pred cCCEEEECCCCC
Confidence 689999999865
No 300
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.97 E-value=0.0037 Score=45.58 Aligned_cols=36 Identities=8% Similarity=-0.006 Sum_probs=30.8
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~--g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.|++++|+||+ +++|.++++.+...|++|+.+++++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~ 46 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLND 46 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCh
Confidence 57899999988 4899998888888999998887764
No 301
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0041 Score=46.68 Aligned_cols=35 Identities=23% Similarity=0.251 Sum_probs=31.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.|.+++|+||++++|.++++.+...|++|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 47899999999999999999888899999998876
No 302
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.96 E-value=0.004 Score=40.29 Aligned_cols=83 Identities=18% Similarity=0.182 Sum_probs=51.3
Q ss_pred EEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCCC-C-CcchH-------------HHHHHhHcCCCccEEEeCCChhhH
Q 041355 19 YVYVSAASGAVGQLVGQFAKL-AGCYVVGSAGSKE-K-EEPDL-------------DAALKRWFPQGIDIYFENVGGKML 82 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~-~g~~vi~~~~~~~-~-~~~~~-------------~~~~~~~~~~~~d~~~d~~g~~~~ 82 (180)
+|.|+|++|-+|..+++.+.. -+.++.+...++. . ..++. ...+.+.... +|+++|++.-+..
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-~DVvIDfT~p~~~ 80 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-ADVVIDFTNPDAV 80 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH--SEEEEES-HHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-CCEEEEcCChHHh
Confidence 589999889999999999987 5778766555544 2 11111 1222333222 8999999966666
Q ss_pred HHHHHhhccCCEEEEEeccc
Q 041355 83 DAVLLNMRLRGRIAVSSIIS 102 (180)
Q Consensus 83 ~~~~~~l~~~G~~v~~~~~~ 102 (180)
...++.+...|.-+.+|..+
T Consensus 81 ~~~~~~~~~~g~~~ViGTTG 100 (124)
T PF01113_consen 81 YDNLEYALKHGVPLVIGTTG 100 (124)
T ss_dssp HHHHHHHHHHT-EEEEE-SS
T ss_pred HHHHHHHHhCCCCEEEECCC
Confidence 66666666667777776643
No 303
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0033 Score=44.84 Aligned_cols=34 Identities=15% Similarity=0.187 Sum_probs=29.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+++|+||++++|...++.+...|++|+.+.++.+
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~ 35 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRD 35 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4899999999999999988888999998887644
No 304
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.94 E-value=0.0038 Score=44.81 Aligned_cols=36 Identities=28% Similarity=0.290 Sum_probs=30.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
..+++|+||+|.+|..+++.+...|.+|+.+.+++.
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~ 41 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDE 41 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCH
Confidence 468999999999999999999889999877666543
No 305
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0046 Score=44.98 Aligned_cols=36 Identities=14% Similarity=0.082 Sum_probs=30.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.+.+++|+||+|++|..+++.+...|++|+.+++++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~ 43 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRS 43 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 467899999999999998888888899988776643
No 306
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.93 E-value=0.0051 Score=46.95 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=32.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.|.+|||+||+|.+|..+++.+...|.+|+++.+.+.
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~ 39 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPP 39 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCc
Confidence 4788999999999999999999888999998887654
No 307
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=96.93 E-value=0.0039 Score=46.40 Aligned_cols=85 Identities=19% Similarity=0.121 Sum_probs=55.3
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC----------Cc----c-hHHHHHHhHcCCCccEEEeCC
Q 041355 14 PKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK----------EE----P-DLDAALKRWFPQGIDIYFENV 77 (180)
Q Consensus 14 ~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~----------~~----~-~~~~~~~~~~~~~~d~~~d~~ 77 (180)
..+|++||-.| +|+ |..++.+++ +|+ +|++++.++.. +. . ...........++||+++...
T Consensus 157 ~~~g~~VLDvG-cGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~~~~~~~~~fDlVvan~ 233 (288)
T TIGR00406 157 DLKDKNVIDVG-CGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIYLEQPIEGKADVIVANI 233 (288)
T ss_pred cCCCCEEEEeC-CCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecccccccCCCceEEEEec
Confidence 45789999999 776 888877776 465 89999988654 00 0 000001111234799998765
Q ss_pred Chh----hHHHHHHhhccCCEEEEEecc
Q 041355 78 GGK----MLDAVLLNMRLRGRIAVSSII 101 (180)
Q Consensus 78 g~~----~~~~~~~~l~~~G~~v~~~~~ 101 (180)
..+ .+..+.+.|+|+|.++..+..
T Consensus 234 ~~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 234 LAEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 443 345667889999999887653
No 308
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=96.92 E-value=0.0047 Score=45.92 Aligned_cols=57 Identities=18% Similarity=0.285 Sum_probs=38.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--CcchHHHHHHhHcCCCccEEEeCCC
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--EEPDLDAALKRWFPQGIDIYFENVG 78 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~d~~g 78 (180)
+|||+||+|.+|.+..+.++..|.+++++.+++-. +...+.+.+.+. ++|+|+.|.+
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~~---~pd~Vin~aa 60 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRSDLDLTDPEAVAKLLEAF---KPDVVINCAA 60 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTTCS-TTSHHHHHHHHHHH-----SEEEE---
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCchhcCCCCHHHHHHHHHHh---CCCeEeccce
Confidence 68999999999999999999989899998666333 222333333332 5899999986
No 309
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0032 Score=46.14 Aligned_cols=34 Identities=15% Similarity=0.166 Sum_probs=29.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+++|+||+|++|...++.+...|++|+.++++.+
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~ 35 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEE 35 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 6899999999999988888888999999887654
No 310
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.91 E-value=0.0043 Score=44.77 Aligned_cols=32 Identities=16% Similarity=0.248 Sum_probs=28.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS 47 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~ 47 (180)
++.+++|+||+|++|..++..+...|++|+..
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~ 34 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVN 34 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence 46789999999999999999998899988764
No 311
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.89 E-value=0.004 Score=44.75 Aligned_cols=37 Identities=24% Similarity=0.352 Sum_probs=30.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++.+++|+||+|.+|..+++.+...|+.|+...++.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~ 41 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVE 41 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4678999999999999988888888998887766543
No 312
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=96.89 E-value=0.0078 Score=49.08 Aligned_cols=38 Identities=21% Similarity=0.228 Sum_probs=33.6
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 13 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 13 ~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
..++|++|+|.| +|++|+++++.++..|++|+++...+
T Consensus 133 ~~~~g~~V~VIG-aGpaGL~aA~~l~~~G~~V~v~e~~~ 170 (564)
T PRK12771 133 APDTGKRVAVIG-GGPAGLSAAYHLRRMGHAVTIFEAGP 170 (564)
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 367899999999 89999999999999999988887543
No 313
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.0038 Score=45.95 Aligned_cols=36 Identities=22% Similarity=0.111 Sum_probs=31.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
+..+++|+||+|++|...++.+...|++|++++++.
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~ 44 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRV 44 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 346899999999999999988888899998888754
No 314
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.89 E-value=0.0062 Score=44.95 Aligned_cols=38 Identities=21% Similarity=0.255 Sum_probs=30.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK 53 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~ 53 (180)
.|+.|||+||++++|.+.++-...+|+.++..+.+.+.
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~ 74 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQG 74 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccc
Confidence 68999999999999988777777778877766666543
No 315
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0044 Score=44.60 Aligned_cols=35 Identities=14% Similarity=0.153 Sum_probs=31.1
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+++|+||+|++|...++.+...|++|++++++++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~ 36 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVE 36 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 47999999999999999888888999999988764
No 316
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.88 E-value=0.0048 Score=44.97 Aligned_cols=36 Identities=19% Similarity=0.279 Sum_probs=30.7
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAA--SGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga--~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.+++++|+|| ++++|.+.++.+...|++|+.++++.
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~ 43 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGR 43 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCcc
Confidence 4678999998 79999998888888999999887653
No 317
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.87 E-value=0.0019 Score=43.60 Aligned_cols=33 Identities=21% Similarity=0.328 Sum_probs=26.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGS 50 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~ 50 (180)
++++|+||++++|...++.+-..|. .|+.+.++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~ 34 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRS 34 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeec
Confidence 3689999999999998877777777 56666665
No 318
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.87 E-value=0.0051 Score=47.98 Aligned_cols=37 Identities=32% Similarity=0.406 Sum_probs=32.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.|++++|+||+|++|.+.++.+...|++|++++++++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~ 213 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSD 213 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4789999999999999998888888999999887654
No 319
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0063 Score=44.22 Aligned_cols=35 Identities=20% Similarity=0.292 Sum_probs=29.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.+.+++|+||+|++|..+++.+...|++|+.++++
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~ 41 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYN 41 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecC
Confidence 46789999999999999998888889987766643
No 320
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.87 E-value=0.0034 Score=45.40 Aligned_cols=36 Identities=22% Similarity=0.270 Sum_probs=31.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+.++||+||+|.+|...+..+...|++|++++++.+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~ 36 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEA 36 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 357999999999999999888888999999988754
No 321
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=96.87 E-value=0.0052 Score=44.29 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=29.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.+.+++|+||+|++|...++.+...|++|+++.++
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~ 39 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNS 39 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCC
Confidence 47899999999999999888888889998876553
No 322
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.87 E-value=0.0052 Score=44.50 Aligned_cols=34 Identities=12% Similarity=0.107 Sum_probs=30.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.+++|+||+|++|..+++.+...|++|+.+++++
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~ 36 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPD 36 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCc
Confidence 5799999999999999888888899999988764
No 323
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.85 E-value=0.0062 Score=45.67 Aligned_cols=36 Identities=19% Similarity=0.172 Sum_probs=31.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.|.+++|+||++++|...++.+...|++|+++++..
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~ 46 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVAS 46 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCc
Confidence 478899999999999998888888899999887643
No 324
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.85 E-value=0.018 Score=43.43 Aligned_cols=84 Identities=10% Similarity=0.059 Sum_probs=57.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCc--chH--HHHHHhHcCCCccEEEeCCChh--h---H-HHH
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEE--PDL--DAALKRWFPQGIDIYFENVGGK--M---L-DAV 85 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~--~~~--~~~~~~~~~~~~d~~~d~~g~~--~---~-~~~ 85 (180)
.|.+|.|.| .|.+|....+.++.+|.+|++..++..... ..+ ...+.+... ..|+++-++... + + ...
T Consensus 135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~-~aDvvv~~lPlt~~T~~li~~~~ 212 (312)
T PRK15469 135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLS-QTRVLINLLPNTPETVGIINQQL 212 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHh-cCCEEEECCCCCHHHHHHhHHHH
Confidence 578999999 999999999999999999999887654310 000 111222211 468998887632 1 2 245
Q ss_pred HHhhccCCEEEEEecc
Q 041355 86 LLNMRLRGRIAVSSII 101 (180)
Q Consensus 86 ~~~l~~~G~~v~~~~~ 101 (180)
+..++++..+++++-.
T Consensus 213 l~~mk~ga~lIN~aRG 228 (312)
T PRK15469 213 LEQLPDGAYLLNLARG 228 (312)
T ss_pred HhcCCCCcEEEECCCc
Confidence 6788999988888653
No 325
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=96.85 E-value=0.0038 Score=46.11 Aligned_cols=58 Identities=22% Similarity=0.285 Sum_probs=42.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-CcchHHHHHHhHcCC-CccEEEeCCCh
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-EEPDLDAALKRWFPQ-GIDIYFENVGG 79 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-~~~~~~~~~~~~~~~-~~d~~~d~~g~ 79 (180)
+|+|+||+|.+|..+++.+...|.+|+++.++... .+. +.+.+...+ .+|++++|.+.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d~~~~---~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDP---EALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccCCCCH---HHHHHHHHhCCCCEEEECCcc
Confidence 48999999999999999998889999998886332 221 223333333 68999998863
No 326
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.85 E-value=0.0065 Score=44.34 Aligned_cols=35 Identities=14% Similarity=0.112 Sum_probs=29.8
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCC
Q 041355 16 KGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~--g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.|++++|+||+ +++|.++++.+-..|++|+.++++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~ 42 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAG 42 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCc
Confidence 47889999987 799999888888889999988654
No 327
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.84 E-value=0.005 Score=44.42 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=28.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
++++|+||+|++|..+++.+...|++|+.+.++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~ 35 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYAR 35 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 479999999999999988888889998776543
No 328
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.84 E-value=0.0057 Score=43.72 Aligned_cols=62 Identities=21% Similarity=0.336 Sum_probs=44.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------CcchHH---HHHHhHcCCCccEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------EEPDLD---AALKRWFPQGIDIYFENVG 78 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------~~~~~~---~~~~~~~~~~~d~~~d~~g 78 (180)
.+.+++|+||+|++|...+..+...|++|+++.++... ...|+. +.+.+.. +++|+++.+.|
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~id~lv~~ag 76 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDDLEPLFDWV-PSVDILCNTAG 76 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccCCcEEEEECChHHHHHHHHHhh-CCCCEEEECCC
Confidence 46789999999999999888888889999988876543 111222 2222222 36899998887
No 329
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=96.83 E-value=0.0052 Score=44.06 Aligned_cols=33 Identities=21% Similarity=0.337 Sum_probs=29.1
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
++++|+||+|++|...++.+...|++|+++.++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~ 33 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGP 33 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 368999999999999998888899999888873
No 330
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=96.83 E-value=0.018 Score=42.62 Aligned_cols=82 Identities=11% Similarity=0.090 Sum_probs=52.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-------------Cc-chHHHHHHhHcC-CC-ccEEEeCCChh--
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-------------EE-PDLDAALKRWFP-QG-IDIYFENVGGK-- 80 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-------------~~-~~~~~~~~~~~~-~~-~d~~~d~~g~~-- 80 (180)
+|+|+||+|.+|..+++.+...|.+|.+.+|++++ .+ ..+...++.... .+ +|.+|-+.+..
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~~ 80 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIPD 80 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCCC
Confidence 48999999999999999888889999999998753 11 122222221111 25 89988776631
Q ss_pred ---hHHHHHHhhccCC--EEEEEec
Q 041355 81 ---MLDAVLLNMRLRG--RIAVSSI 100 (180)
Q Consensus 81 ---~~~~~~~~l~~~G--~~v~~~~ 100 (180)
.....+..++..| +++.++.
T Consensus 81 ~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 81 LAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred hhHHHHHHHHHHHHcCCCEEEEeec
Confidence 2334444444444 6777754
No 331
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=96.83 E-value=0.0052 Score=44.77 Aligned_cols=85 Identities=18% Similarity=0.193 Sum_probs=54.8
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---CcchHHH-HH---HhHcCC--CccEEEeCCChh---
Q 041355 14 PKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---EEPDLDA-AL---KRWFPQ--GIDIYFENVGGK--- 80 (180)
Q Consensus 14 ~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---~~~~~~~-~~---~~~~~~--~~d~~~d~~g~~--- 80 (180)
+.++++||-.| +|+ |..++.+++ .|+ +|++++.++.. ..+.... .+ .....+ .||+++-....+
T Consensus 117 ~~~~~~VLDiG-cGs-G~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~~~~~fD~Vvani~~~~~~ 193 (250)
T PRK00517 117 VLPGKTVLDVG-CGS-GILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQGDLKADVIVANILANPLL 193 (250)
T ss_pred cCCCCEEEEeC-CcH-HHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEccCCCCcCEEEEcCcHHHHH
Confidence 56899999999 776 888876555 566 69999887654 0001100 01 001122 489998766544
Q ss_pred -hHHHHHHhhccCCEEEEEecc
Q 041355 81 -MLDAVLLNMRLRGRIAVSSII 101 (180)
Q Consensus 81 -~~~~~~~~l~~~G~~v~~~~~ 101 (180)
.+..+.+.|+++|+++..+..
T Consensus 194 ~l~~~~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 194 ELAPDLARLLKPGGRLILSGIL 215 (250)
T ss_pred HHHHHHHHhcCCCcEEEEEECc
Confidence 345667889999999987653
No 332
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.83 E-value=0.0056 Score=44.46 Aligned_cols=87 Identities=18% Similarity=0.137 Sum_probs=55.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC----------------CcchHHHHHHhHcCCCccEEEeCCCh
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----------------EEPDLDAALKRWFPQGIDIYFENVGG 79 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~----------------~~~~~~~~~~~~~~~~~d~~~d~~g~ 79 (180)
.+.+|+|+||+|.+|..+++.+...|.+|+++.++.++ +-.+....+.+....++|++|.+.|.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~ 95 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF 95 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence 35789999999999999988887789999988876432 00111122333332368999988763
Q ss_pred h--------------hHHHHHHhhcc--CCEEEEEeccc
Q 041355 80 K--------------MLDAVLLNMRL--RGRIAVSSIIS 102 (180)
Q Consensus 80 ~--------------~~~~~~~~l~~--~G~~v~~~~~~ 102 (180)
. ....+++.++. .++++.+++..
T Consensus 96 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~ 134 (251)
T PLN00141 96 RRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL 134 (251)
T ss_pred CcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence 1 12334444433 36888877654
No 333
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.82 E-value=0.0066 Score=44.49 Aligned_cols=35 Identities=11% Similarity=0.162 Sum_probs=29.7
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCC
Q 041355 16 KGEYVYVSAASG--AVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~g--~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.|.+++|+||++ ++|.++++.+-..|++|+.++++
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~ 41 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN 41 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc
Confidence 478899999875 89999888888889999887765
No 334
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.81 E-value=0.0044 Score=45.29 Aligned_cols=35 Identities=6% Similarity=0.113 Sum_probs=29.2
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 16 KGEYVYVSAA--SGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga--~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.|.+++|+|| ++++|.+.++.+...|++|+.+.+.
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~ 41 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVV 41 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc
Confidence 4678999996 6699999888888899999887654
No 335
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=96.81 E-value=0.019 Score=36.90 Aligned_cols=81 Identities=14% Similarity=0.088 Sum_probs=49.1
Q ss_pred EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCCCCCcchHHHHHH-----------h---HcCCCccEEEeCCChhhHH
Q 041355 19 YVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKEEPDLDAALK-----------R---WFPQGIDIYFENVGGKMLD 83 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~-g~~vi~~~~~~~~~~~~~~~~~~-----------~---~~~~~~d~~~d~~g~~~~~ 83 (180)
+|.|.||+|-+|..+++++..+ .++++.+.++.......+..... + ..-.++|++|.|.+.....
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~~~ 80 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGASK 80 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHHHH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhHHH
Confidence 5899999999999999888765 55766655554420001110000 0 0003689999999988555
Q ss_pred HHHHh-hccCCEEEEEe
Q 041355 84 AVLLN-MRLRGRIAVSS 99 (180)
Q Consensus 84 ~~~~~-l~~~G~~v~~~ 99 (180)
..... ++.+-+++...
T Consensus 81 ~~~~~~~~~g~~ViD~s 97 (121)
T PF01118_consen 81 ELAPKLLKAGIKVIDLS 97 (121)
T ss_dssp HHHHHHHHTTSEEEESS
T ss_pred HHHHHHhhCCcEEEeCC
Confidence 55544 45665666653
No 336
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.80 E-value=0.01 Score=43.87 Aligned_cols=77 Identities=19% Similarity=0.188 Sum_probs=60.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHhhccCCEE
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRI 95 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~ 95 (180)
.|.+++|.|.+..+|.-...++...|++|..+.+. ..++.+.+++ .|+++-++|.+.+-.. ..++++..+
T Consensus 157 ~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~----t~~l~~~~~~-----ADIVV~avG~~~~i~~-~~ik~gavV 226 (285)
T PRK14189 157 RGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK----TRDLAAHTRQ-----ADIVVAAVGKRNVLTA-DMVKPGATV 226 (285)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC----CCCHHHHhhh-----CCEEEEcCCCcCccCH-HHcCCCCEE
Confidence 79999999988888999999999999999875442 3345444544 7999999997743222 789999999
Q ss_pred EEEeccc
Q 041355 96 AVSSIIS 102 (180)
Q Consensus 96 v~~~~~~ 102 (180)
+.+|...
T Consensus 227 IDVGin~ 233 (285)
T PRK14189 227 IDVGMNR 233 (285)
T ss_pred EEccccc
Confidence 9998754
No 337
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.80 E-value=0.014 Score=44.01 Aligned_cols=82 Identities=21% Similarity=0.202 Sum_probs=52.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC----C-------cchH--HHHHHhHcCCCccEEEeCCChh-----
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----E-------EPDL--DAALKRWFPQGIDIYFENVGGK----- 80 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~----~-------~~~~--~~~~~~~~~~~~d~~~d~~g~~----- 80 (180)
+|+|+||+|-+|...++.+...|.+|++.+++.+. . ..|+ .+.+.+... ++|+++.+++..
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~-g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFK-GVTAIIDASTSRPSDLY 80 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHC-CCCEEEECCCCCCCCcc
Confidence 69999999999999999888889999999987432 0 0011 122333322 589999987531
Q ss_pred h--------HHHHHHhhccCC--EEEEEecc
Q 041355 81 M--------LDAVLLNMRLRG--RIAVSSII 101 (180)
Q Consensus 81 ~--------~~~~~~~l~~~G--~~v~~~~~ 101 (180)
. ...+++.++..| +++.++..
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 0 123344444444 78877664
No 338
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=96.80 E-value=0.0067 Score=42.16 Aligned_cols=62 Identities=15% Similarity=0.198 Sum_probs=45.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC----------------------CcchHHHHHHhHcC--CCccE
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----------------------EEPDLDAALKRWFP--QGIDI 72 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~----------------------~~~~~~~~~~~~~~--~~~d~ 72 (180)
.+..+|+||++++|.+..|.+-..|++|.+.+...+. +..+....+.+..+ +.+++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 4557899999999999999999999999988877554 12222222333322 37899
Q ss_pred EEeCCC
Q 041355 73 YFENVG 78 (180)
Q Consensus 73 ~~d~~g 78 (180)
+++|.|
T Consensus 94 lVncAG 99 (256)
T KOG1200|consen 94 LVNCAG 99 (256)
T ss_pred EEEcCc
Confidence 999998
No 339
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.78 E-value=0.0045 Score=44.67 Aligned_cols=39 Identities=18% Similarity=0.182 Sum_probs=33.9
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 14 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 14 ~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
..++.+++|+||+|++|...++.+...|++|++++++.+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~ 47 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEE 47 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHH
Confidence 457889999999999999988888888999999988753
No 340
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.77 E-value=0.0051 Score=44.51 Aligned_cols=35 Identities=14% Similarity=0.169 Sum_probs=30.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+++|+||+|++|...++.+...|++|+.+.+++.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~ 35 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEE 35 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36899999999999999888889999999888743
No 341
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.76 E-value=0.0059 Score=45.04 Aligned_cols=36 Identities=8% Similarity=0.021 Sum_probs=30.7
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~--g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
.|++++|+||+ +++|.++++.+-..|++|+.++++.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~ 41 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNE 41 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCH
Confidence 47899999987 7999998888888899999887763
No 342
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.76 E-value=0.0089 Score=46.89 Aligned_cols=65 Identities=22% Similarity=0.377 Sum_probs=46.0
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCCCcchHH----------HHHHhHcCCCccEEEeCCChh
Q 041355 13 SPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKEEPDLD----------AALKRWFPQGIDIYFENVGGK 80 (180)
Q Consensus 13 ~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~~~~~~~----------~~~~~~~~~~~d~~~d~~g~~ 80 (180)
..-++++++|+| +|.+|..+++.++..|+ +|+++.++.++ ...+. +.+.+.. .++|++|.|++..
T Consensus 176 ~~l~~~~VlViG-aG~iG~~~a~~L~~~G~~~V~v~~rs~~r-a~~la~~~g~~~i~~~~l~~~l-~~aDvVi~aT~s~ 251 (417)
T TIGR01035 176 GSLKGKKALLIG-AGEMGELVAKHLLRKGVGKILIANRTYER-AEDLAKELGGEAVKFEDLEEYL-AEADIVISSTGAP 251 (417)
T ss_pred CCccCCEEEEEC-ChHHHHHHHHHHHHCCCCEEEEEeCCHHH-HHHHHHHcCCeEeeHHHHHHHH-hhCCEEEECCCCC
Confidence 346789999999 79999999999999995 88888887554 00011 1111111 2689999999865
No 343
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=96.76 E-value=0.0075 Score=44.02 Aligned_cols=35 Identities=14% Similarity=0.061 Sum_probs=29.1
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCC
Q 041355 16 KGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~--g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.|++++|+||+ +++|.++++.+...|++|+.+.++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~ 41 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLP 41 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecC
Confidence 47889999976 799999888888899998877543
No 344
>PRK12827 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.0081 Score=43.19 Aligned_cols=35 Identities=17% Similarity=0.218 Sum_probs=29.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.+.+++|+||+|++|...++.+...|++|+.+++.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~ 39 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIH 39 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCc
Confidence 35789999999999999888888889998886653
No 345
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.75 E-value=0.021 Score=42.39 Aligned_cols=78 Identities=15% Similarity=0.087 Sum_probs=56.2
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHhhccCCE
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGR 94 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~ 94 (180)
-.|.+++|.|+++-+|....+++...|++|.++.+. ..++.+.+ .++|+++.|+|.+.+- -...++++..
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~----t~~L~~~~-----~~aDIvI~AtG~~~~v-~~~~lk~gav 226 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR----TQNLPELV-----KQADIIVGAVGKPELI-KKDWIKQGAV 226 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC----chhHHHHh-----ccCCEEEEccCCCCcC-CHHHcCCCCE
Confidence 478999999965569999999999999976665552 23333333 2589999999866321 1256889988
Q ss_pred EEEEeccc
Q 041355 95 IAVSSIIS 102 (180)
Q Consensus 95 ~v~~~~~~ 102 (180)
++.++...
T Consensus 227 ViDvg~n~ 234 (283)
T PRK14192 227 VVDAGFHP 234 (283)
T ss_pred EEEEEEee
Confidence 88887643
No 346
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.74 E-value=0.013 Score=37.30 Aligned_cols=89 Identities=18% Similarity=0.208 Sum_probs=57.8
Q ss_pred HHHcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCCCC-----------CcchH--H-H---HHHhHcCCCc
Q 041355 9 ILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEK-----------EEPDL--D-A---ALKRWFPQGI 70 (180)
Q Consensus 9 ~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g-~~vi~~~~~~~~-----------~~~~~--~-~---~~~~~~~~~~ 70 (180)
.....+.++++++-.| +|. |..+..+++..+ .+|++++.++.. ..++. . . .......+.+
T Consensus 12 ~~~~~~~~~~~vldlG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (124)
T TIGR02469 12 LSKLRLRPGDVLWDIG-AGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEP 89 (124)
T ss_pred HHHcCCCCCCEEEEeC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCC
Confidence 3455677888999998 655 999999998875 589999987654 00000 0 0 0001112378
Q ss_pred cEEEeCCChh----hHHHHHHhhccCCEEEEEe
Q 041355 71 DIYFENVGGK----MLDAVLLNMRLRGRIAVSS 99 (180)
Q Consensus 71 d~~~d~~g~~----~~~~~~~~l~~~G~~v~~~ 99 (180)
|+++-..+.. .+..+.+.|+++|+++...
T Consensus 90 D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 90 DRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred CEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 9988654322 5677888999999998653
No 347
>PRK06487 glycerate dehydrogenase; Provisional
Probab=96.73 E-value=0.021 Score=43.16 Aligned_cols=80 Identities=16% Similarity=0.126 Sum_probs=56.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---CcchHHHHHHhHcCCCccEEEeCCCh-h-h---H-HHHH
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---EEPDLDAALKRWFPQGIDIYFENVGG-K-M---L-DAVL 86 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~d~~g~-~-~---~-~~~~ 86 (180)
.|.++.|+| .|.+|...++.++.+|.+|++..++... ...++.+-+. ..|++.-++.. + + + ...+
T Consensus 147 ~gktvgIiG-~G~IG~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~-----~sDiv~l~lPlt~~T~~li~~~~~ 220 (317)
T PRK06487 147 EGKTLGLLG-HGELGGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLP-----QVDALTLHCPLTEHTRHLIGAREL 220 (317)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHH-----hCCEEEECCCCChHHhcCcCHHHH
Confidence 577999999 9999999999999999999988765322 1112222222 35888776652 2 1 1 3556
Q ss_pred HhhccCCEEEEEecc
Q 041355 87 LNMRLRGRIAVSSII 101 (180)
Q Consensus 87 ~~l~~~G~~v~~~~~ 101 (180)
..++++..+++++-.
T Consensus 221 ~~mk~ga~lIN~aRG 235 (317)
T PRK06487 221 ALMKPGALLINTARG 235 (317)
T ss_pred hcCCCCeEEEECCCc
Confidence 788888888888653
No 348
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.72 E-value=0.035 Score=41.14 Aligned_cols=83 Identities=22% Similarity=0.098 Sum_probs=61.8
Q ss_pred HHcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHh
Q 041355 10 LVCSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLN 88 (180)
Q Consensus 10 ~~~~~~-~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~ 88 (180)
+.-++. .|.+++|.|.+.-+|.-+..++...|++|.++.+ ..+++.+.+++ .|+++-++|.+.+-. -..
T Consensus 149 ~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs----~t~~l~~~~~~-----ADIvV~AvG~p~~i~-~~~ 218 (285)
T PRK14191 149 KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI----LTKDLSFYTQN-----ADIVCVGVGKPDLIK-ASM 218 (285)
T ss_pred HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC----CcHHHHHHHHh-----CCEEEEecCCCCcCC-HHH
Confidence 434444 6999999998889999999999999999876543 23445444554 799999999874422 246
Q ss_pred hccCCEEEEEeccc
Q 041355 89 MRLRGRIAVSSIIS 102 (180)
Q Consensus 89 l~~~G~~v~~~~~~ 102 (180)
++++..++.+|...
T Consensus 219 vk~GavVIDvGi~~ 232 (285)
T PRK14191 219 VKKGAVVVDIGINR 232 (285)
T ss_pred cCCCcEEEEeeccc
Confidence 79999999998743
No 349
>PRK06849 hypothetical protein; Provisional
Probab=96.72 E-value=0.016 Score=44.95 Aligned_cols=79 Identities=14% Similarity=0.096 Sum_probs=54.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-------------------CcchHHHHHHhHcCC-CccEEEe
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-------------------EEPDLDAALKRWFPQ-GIDIYFE 75 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-------------------~~~~~~~~~~~~~~~-~~d~~~d 75 (180)
...+|||+|+..++|+..++.++..|.+|+++++.+.. +.+.+.+.+.+.... ++|+++-
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~vIP 82 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLLIP 82 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 45789999988889999999999999999999887543 123455666665554 7888887
Q ss_pred CCChh-hHHHHHHhhccCCE
Q 041355 76 NVGGK-MLDAVLLNMRLRGR 94 (180)
Q Consensus 76 ~~g~~-~~~~~~~~l~~~G~ 94 (180)
+.... .+......+.++.+
T Consensus 83 ~~e~~~~~a~~~~~l~~~~~ 102 (389)
T PRK06849 83 TCEEVFYLSHAKEELSAYCE 102 (389)
T ss_pred CChHHHhHHhhhhhhcCCcE
Confidence 76643 22222334544433
No 350
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.71 E-value=0.0065 Score=44.39 Aligned_cols=35 Identities=17% Similarity=0.195 Sum_probs=29.9
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCC
Q 041355 16 KGEYVYVSAASG--AVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~g--~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.|+.++|+||++ ++|.++++.+...|++|+.++++
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~ 43 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQS 43 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCc
Confidence 578899999987 89999888887889999888765
No 351
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.70 E-value=0.037 Score=40.98 Aligned_cols=83 Identities=19% Similarity=0.104 Sum_probs=62.5
Q ss_pred HHcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHh
Q 041355 10 LVCSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLN 88 (180)
Q Consensus 10 ~~~~~~-~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~ 88 (180)
+..++. .|++++|.|.+.-+|.-..+++...|++|.++.+. ..++.+.+++ .|+++.++|.+.+-. -..
T Consensus 151 ~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~----T~~l~~~~~~-----ADIvi~avG~p~~v~-~~~ 220 (285)
T PRK10792 151 ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRF----TKNLRHHVRN-----ADLLVVAVGKPGFIP-GEW 220 (285)
T ss_pred HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECC----CCCHHHHHhh-----CCEEEEcCCCccccc-HHH
Confidence 444443 69999999988889999999999999998877653 3344444444 799999999874322 267
Q ss_pred hccCCEEEEEeccc
Q 041355 89 MRLRGRIAVSSIIS 102 (180)
Q Consensus 89 l~~~G~~v~~~~~~ 102 (180)
++++..++.+|...
T Consensus 221 vk~gavVIDvGin~ 234 (285)
T PRK10792 221 IKPGAIVIDVGINR 234 (285)
T ss_pred cCCCcEEEEccccc
Confidence 89999999998643
No 352
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=96.70 E-value=0.015 Score=43.76 Aligned_cols=80 Identities=20% Similarity=0.133 Sum_probs=56.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCc-----chHHHHHHhHcCCCccEEEeCCC-hh-h----HHH
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEE-----PDLDAALKRWFPQGIDIYFENVG-GK-M----LDA 84 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~-----~~~~~~~~~~~~~~~d~~~d~~g-~~-~----~~~ 84 (180)
.|.++.|.| .|.+|...++.++.+|.+|++.+++..... .++.+-+. ..|++.-++. ++ + -..
T Consensus 144 ~gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~-----~sDvv~lh~Plt~~T~~li~~~ 217 (311)
T PRK08410 144 KGKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLK-----TSDIISIHAPLNEKTKNLIAYK 217 (311)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhh-----cCCEEEEeCCCCchhhcccCHH
Confidence 578999999 999999999999999999999887543211 12222222 2578776654 22 1 145
Q ss_pred HHHhhccCCEEEEEecc
Q 041355 85 VLLNMRLRGRIAVSSII 101 (180)
Q Consensus 85 ~~~~l~~~G~~v~~~~~ 101 (180)
.+..++++..+++++-.
T Consensus 218 ~~~~Mk~~a~lIN~aRG 234 (311)
T PRK08410 218 ELKLLKDGAILINVGRG 234 (311)
T ss_pred HHHhCCCCeEEEECCCc
Confidence 66788999999988653
No 353
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.69 E-value=0.048 Score=36.06 Aligned_cols=81 Identities=15% Similarity=0.062 Sum_probs=60.2
Q ss_pred HHcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHh
Q 041355 10 LVCSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLN 88 (180)
Q Consensus 10 ~~~~~~-~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~ 88 (180)
+.-+++ .|.+|+|+|.+..+|.-+..++...|++|..+.+. ..++.+.+++ .|+++-++|...+- --..
T Consensus 20 ~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~----t~~l~~~v~~-----ADIVvsAtg~~~~i-~~~~ 89 (140)
T cd05212 20 NKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWK----TIQLQSKVHD-----ADVVVVGSPKPEKV-PTEW 89 (140)
T ss_pred HHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCC----CcCHHHHHhh-----CCEEEEecCCCCcc-CHHH
Confidence 333443 79999999999999999999999999999887653 2344444444 79999999976321 1256
Q ss_pred hccCCEEEEEec
Q 041355 89 MRLRGRIAVSSI 100 (180)
Q Consensus 89 l~~~G~~v~~~~ 100 (180)
++++-.++.++.
T Consensus 90 ikpGa~Vidvg~ 101 (140)
T cd05212 90 IKPGATVINCSP 101 (140)
T ss_pred cCCCCEEEEcCC
Confidence 899988887765
No 354
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.69 E-value=0.083 Score=39.14 Aligned_cols=77 Identities=13% Similarity=0.074 Sum_probs=60.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHhhccCCE
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGR 94 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~ 94 (180)
-.|.+++|.|.+..+|.-...++...|+.|..+.+. ..++.+..++ .|+++-++|...+-. -..++++..
T Consensus 157 l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~----T~~l~~~~~~-----ADIvIsAvGk~~~i~-~~~ik~gav 226 (284)
T PRK14177 157 VTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSK----TQNLPSIVRQ-----ADIIVGAVGKPEFIK-ADWISEGAV 226 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC----CCCHHHHHhh-----CCEEEEeCCCcCccC-HHHcCCCCE
Confidence 379999999999999999999999999988866542 3445544544 799999999875422 368899999
Q ss_pred EEEEecc
Q 041355 95 IAVSSII 101 (180)
Q Consensus 95 ~v~~~~~ 101 (180)
++.+|..
T Consensus 227 VIDvGin 233 (284)
T PRK14177 227 LLDAGYN 233 (284)
T ss_pred EEEecCc
Confidence 9999874
No 355
>PRK07023 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.011 Score=42.45 Aligned_cols=34 Identities=24% Similarity=0.281 Sum_probs=29.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+++|+||+|++|..+++.+...|++|+.++++.+
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~ 36 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRH 36 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcc
Confidence 6899999999999998888888999998887643
No 356
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=96.68 E-value=0.0074 Score=45.43 Aligned_cols=36 Identities=17% Similarity=0.146 Sum_probs=30.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKE 52 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g-~~vi~~~~~~~ 52 (180)
+.+++|+||++++|..+++.+...| ++|+.++++.+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~ 39 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFL 39 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence 5689999999999999888777789 89999887643
No 357
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.0087 Score=43.31 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=29.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS-AGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~-~~~ 50 (180)
.+.+++|+||+|++|..+++.+...|++|++. .++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~ 40 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRN 40 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 35789999999999999998888889988765 443
No 358
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.68 E-value=0.0062 Score=44.89 Aligned_cols=97 Identities=26% Similarity=0.314 Sum_probs=65.2
Q ss_pred HHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------CcchHHHHH----HhH--cCCCc
Q 041355 5 GNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------EEPDLDAAL----KRW--FPQGI 70 (180)
Q Consensus 5 ~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------~~~~~~~~~----~~~--~~~~~ 70 (180)
...+.+..++++|+++|=+| || =|.+++-.|+.+|++|++++-|++. ....+...+ ..+ ..+.|
T Consensus 61 ~~~~~~kl~L~~G~~lLDiG-CG-WG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd~~e~f 138 (283)
T COG2230 61 LDLILEKLGLKPGMTLLDIG-CG-WGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRDFEEPF 138 (283)
T ss_pred HHHHHHhcCCCCCCEEEEeC-CC-hhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecccccccccc
Confidence 34556778899999999998 55 4788899999999999999999775 000111001 110 11246
Q ss_pred cEEE-----eCCChh----hHHHHHHhhccCCEEEEEecccc
Q 041355 71 DIYF-----ENVGGK----MLDAVLLNMRLRGRIAVSSIISQ 103 (180)
Q Consensus 71 d~~~-----d~~g~~----~~~~~~~~l~~~G~~v~~~~~~~ 103 (180)
|-|+ +-+|.+ .+..+-+.|+|+|++........
T Consensus 139 DrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~ 180 (283)
T COG2230 139 DRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGP 180 (283)
T ss_pred ceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCC
Confidence 6653 344542 45677789999999988776553
No 359
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.66 E-value=0.0072 Score=43.40 Aligned_cols=35 Identities=26% Similarity=0.406 Sum_probs=29.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGS-AGSK 51 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~-~~~~ 51 (180)
+.+++|+||+|++|...+..+...|++|+.+ .++.
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~ 40 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINE 40 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 4689999999999999888777789998888 6654
No 360
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.0096 Score=42.85 Aligned_cols=35 Identities=14% Similarity=0.240 Sum_probs=30.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+++|+||+|++|..++..+...|++|++++++++
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~ 36 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQS 36 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 46899999999999888777778999999988653
No 361
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.64 E-value=0.0081 Score=44.26 Aligned_cols=37 Identities=8% Similarity=0.047 Sum_probs=31.0
Q ss_pred CCCCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCC
Q 041355 14 PKKGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 14 ~~~g~~vlI~Ga~--g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
+-.|++++|+||+ +++|.++++.+...|++|+.+.++
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~ 45 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQG 45 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc
Confidence 3457899999986 799999888888899999887765
No 362
>PRK06932 glycerate dehydrogenase; Provisional
Probab=96.64 E-value=0.019 Score=43.30 Aligned_cols=80 Identities=19% Similarity=0.193 Sum_probs=56.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--C--cchHHHHHHhHcCCCccEEEeCCC-hh-h---H-HHH
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--E--EPDLDAALKRWFPQGIDIYFENVG-GK-M---L-DAV 85 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--~--~~~~~~~~~~~~~~~~d~~~d~~g-~~-~---~-~~~ 85 (180)
.|.++.|.| .|.+|....+.++.+|.+|++..+.... . ..++.+-+. ..|++.-++. ++ + + ...
T Consensus 146 ~gktvgIiG-~G~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~-----~sDiv~l~~Plt~~T~~li~~~~ 219 (314)
T PRK06932 146 RGSTLGVFG-KGCLGTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLK-----QADIVTLHCPLTETTQNLINAET 219 (314)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHH-----hCCEEEEcCCCChHHhcccCHHH
Confidence 478999999 9999999999999999999988765322 1 112222222 3688877665 22 2 1 355
Q ss_pred HHhhccCCEEEEEecc
Q 041355 86 LLNMRLRGRIAVSSII 101 (180)
Q Consensus 86 ~~~l~~~G~~v~~~~~ 101 (180)
+..++++..+++++-.
T Consensus 220 l~~mk~ga~lIN~aRG 235 (314)
T PRK06932 220 LALMKPTAFLINTGRG 235 (314)
T ss_pred HHhCCCCeEEEECCCc
Confidence 6788999999988653
No 363
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.0055 Score=50.72 Aligned_cols=36 Identities=28% Similarity=0.311 Sum_probs=31.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
|.+++|+||+|++|..+++.+...|++|++++++++
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~ 406 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGE 406 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 678999999999999988888888999999988754
No 364
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.63 E-value=0.027 Score=38.00 Aligned_cols=80 Identities=6% Similarity=0.057 Sum_probs=51.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHH-----HHHh-HcC---CCccEEEeCCChhhHHHHH
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDA-----ALKR-WFP---QGIDIYFENVGGKMLDAVL 86 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~-----~~~~-~~~---~~~d~~~d~~g~~~~~~~~ 86 (180)
.|.+|+|.| +|.+|..-++.+...|++|.++... . .+++.+ ...+ ... .++|+++-+.+.+..+..+
T Consensus 12 ~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp~--~-~~~l~~l~~i~~~~~~~~~~dl~~a~lViaaT~d~e~N~~i 87 (157)
T PRK06719 12 HNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSPE--I-CKEMKELPYITWKQKTFSNDDIKDAHLIYAATNQHAVNMMV 87 (157)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCc--c-CHHHHhccCcEEEecccChhcCCCceEEEECCCCHHHHHHH
Confidence 578899999 8999998888888889988877422 1 111111 0011 111 2689999999988777766
Q ss_pred HhhccCCEEEEEe
Q 041355 87 LNMRLRGRIAVSS 99 (180)
Q Consensus 87 ~~l~~~G~~v~~~ 99 (180)
...+..+.+++..
T Consensus 88 ~~~a~~~~~vn~~ 100 (157)
T PRK06719 88 KQAAHDFQWVNVV 100 (157)
T ss_pred HHHHHHCCcEEEC
Confidence 6555444455543
No 365
>PRK05855 short chain dehydrogenase; Validated
Probab=96.62 E-value=0.0061 Score=49.47 Aligned_cols=37 Identities=24% Similarity=0.274 Sum_probs=32.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+++|+||+|++|...++-+...|++|+.++++.+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~ 350 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEA 350 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4578999999999999988888889999999888753
No 366
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=96.60 E-value=0.012 Score=42.33 Aligned_cols=31 Identities=16% Similarity=0.193 Sum_probs=26.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEe
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSA 48 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~ 48 (180)
.+++|+||+|++|...++.+...|++|+++.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~ 32 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNY 32 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 3689999999999999988888899987654
No 367
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=96.59 E-value=0.013 Score=34.58 Aligned_cols=57 Identities=19% Similarity=0.235 Sum_probs=40.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---CcchHHHHHHhHcCC-CccEEEeC
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---EEPDLDAALKRWFPQ-GIDIYFEN 76 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---~~~~~~~~~~~~~~~-~~d~~~d~ 76 (180)
+++|.| +|.+|+-+++.++.+|.+|..+.+++.- -+++....+.+.... ++++.+++
T Consensus 1 ~vvViG-gG~ig~E~A~~l~~~g~~vtli~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~~~ 61 (80)
T PF00070_consen 1 RVVVIG-GGFIGIELAEALAELGKEVTLIERSDRLLPGFDPDAAKILEEYLRKRGVEVHTNT 61 (80)
T ss_dssp EEEEES-SSHHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEEESE
T ss_pred CEEEEC-cCHHHHHHHHHHHHhCcEEEEEeccchhhhhcCHHHHHHHHHHHHHCCCEEEeCC
Confidence 578999 8999999999999999999999988775 334444444443322 56665543
No 368
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.59 E-value=0.0067 Score=50.53 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=32.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.|.+++|+||+|++|..+++.+...|++|+.++++.+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~ 449 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLE 449 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 3688999999999999999888888999999988643
No 369
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.58 E-value=0.006 Score=38.10 Aligned_cols=80 Identities=20% Similarity=0.215 Sum_probs=54.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC----CC---CcchHHHHHHhHcCCCccEEEeCCChhhHHHHH-H
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK----EK---EEPDLDAALKRWFPQGIDIYFENVGGKMLDAVL-L 87 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~----~~---~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~-~ 87 (180)
.|.+|||.| .|.+|..-++.+...|++|.+++... +. ....+ .+.. .++++++-|.+.+.++..+ .
T Consensus 6 ~~~~vlVvG-gG~va~~k~~~Ll~~gA~v~vis~~~~~~~~~i~~~~~~~----~~~l-~~~~lV~~at~d~~~n~~i~~ 79 (103)
T PF13241_consen 6 KGKRVLVVG-GGPVAARKARLLLEAGAKVTVISPEIEFSEGLIQLIRREF----EEDL-DGADLVFAATDDPELNEAIYA 79 (103)
T ss_dssp TT-EEEEEE-ESHHHHHHHHHHCCCTBEEEEEESSEHHHHTSCEEEESS-----GGGC-TTESEEEE-SS-HHHHHHHHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCchhhhhhHHHHHhhhH----HHHH-hhheEEEecCCCHHHHHHHHH
Confidence 578899999 79999999999999999999988873 11 11122 1111 2689999999988665544 5
Q ss_pred hhccCCEEEEEecc
Q 041355 88 NMRLRGRIAVSSII 101 (180)
Q Consensus 88 ~l~~~G~~v~~~~~ 101 (180)
..+..|.++++...
T Consensus 80 ~a~~~~i~vn~~D~ 93 (103)
T PF13241_consen 80 DARARGILVNVVDD 93 (103)
T ss_dssp HHHHTTSEEEETT-
T ss_pred HHhhCCEEEEECCC
Confidence 56678999888553
No 370
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=96.58 E-value=0.016 Score=41.31 Aligned_cols=60 Identities=18% Similarity=0.236 Sum_probs=44.0
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCc------------ch--HHHHHHhHcCC-CccEEEeCCCh
Q 041355 20 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEE------------PD--LDAALKRWFPQ-GIDIYFENVGG 79 (180)
Q Consensus 20 vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~------------~~--~~~~~~~~~~~-~~d~~~d~~g~ 79 (180)
|||+||+|-+|..++..+...|..|+...+++.... .+ -.+.+.+.... .+|.++.+.+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeecc
Confidence 799999999999999999999999888888776510 00 12233333333 78999998774
No 371
>PRK06123 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.0099 Score=42.84 Aligned_cols=34 Identities=18% Similarity=0.139 Sum_probs=28.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
+.+++|+||+|++|..+++.+...|++|+.+.++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~ 35 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLR 35 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCC
Confidence 4579999999999999888888889988766543
No 372
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=96.57 E-value=0.011 Score=42.51 Aligned_cols=34 Identities=18% Similarity=0.176 Sum_probs=30.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
++++|+||+|++|..+++.+...|++|+.+++++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~ 36 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSG 36 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCc
Confidence 4789999999999998888887899999998874
No 373
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=96.53 E-value=0.016 Score=42.41 Aligned_cols=33 Identities=18% Similarity=0.119 Sum_probs=29.1
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.+++|+||++++|...++.+-..|++|+.++++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~ 34 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHR 34 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCC
Confidence 468999999999999999888899999987654
No 374
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=96.52 E-value=0.0079 Score=44.95 Aligned_cols=58 Identities=9% Similarity=0.107 Sum_probs=40.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---CcchHHHHHHhHcCC-CccEEEeCCC
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---EEPDLDAALKRWFPQ-GIDIYFENVG 78 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---~~~~~~~~~~~~~~~-~~d~~~d~~g 78 (180)
+|||+||+|-+|...++.+...| +|+++++.... +-.+ .+.+.+...+ ++|++|.|.+
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~D~Vih~Aa 63 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHSTDYCGDFSN-PEGVAETVRKIRPDVIVNAAA 63 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEeccccccccCCCCC-HHHHHHHHHhcCCCEEEECCc
Confidence 69999999999999999888778 78887775432 1111 1223333333 6899999876
No 375
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.52 E-value=0.0027 Score=44.96 Aligned_cols=92 Identities=20% Similarity=0.210 Sum_probs=58.4
Q ss_pred HHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCCCCCcchHHHHHHh----------------Hc-
Q 041355 6 NLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKEEPDLDAALKR----------------WF- 66 (180)
Q Consensus 6 ~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~--~vi~~~~~~~~~~~~~~~~~~~----------------~~- 66 (180)
..+.+...+++|++||-.| ++.|+.+.-+++..|- .|+.+.+.+.-. +.....+.. +.
T Consensus 62 a~~l~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~-~~A~~~l~~~~~~nv~~~~gdg~~g~~~ 138 (209)
T PF01135_consen 62 ARMLEALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELA-ERARRNLARLGIDNVEVVVGDGSEGWPE 138 (209)
T ss_dssp HHHHHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHH-HHHHHHHHHHTTHSEEEEES-GGGTTGG
T ss_pred HHHHHHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHH-HHHHHHHHHhccCceeEEEcchhhcccc
Confidence 3344677899999999998 3468888889998875 588777754420 000011110 00
Q ss_pred CCCccEEEeCCChhhH-HHHHHhhccCCEEEEEec
Q 041355 67 PQGIDIYFENVGGKML-DAVLLNMRLRGRIAVSSI 100 (180)
Q Consensus 67 ~~~~d~~~d~~g~~~~-~~~~~~l~~~G~~v~~~~ 100 (180)
.+.||.|+-+.+-+.. ...+..|+++|+++..-.
T Consensus 139 ~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi~ 173 (209)
T PF01135_consen 139 EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAPIG 173 (209)
T ss_dssp G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEEES
T ss_pred CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEEEc
Confidence 1268999888776643 567789999999998644
No 376
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.51 E-value=0.0044 Score=50.12 Aligned_cols=41 Identities=22% Similarity=0.242 Sum_probs=35.4
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 12 CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 12 ~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+.|++|+|+||+|.+|..+++.+...|++|++++++.+
T Consensus 75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~e 115 (576)
T PLN03209 75 LDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQ 115 (576)
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 34468899999999999999999988888999999888654
No 377
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.036 Score=40.88 Aligned_cols=34 Identities=32% Similarity=0.343 Sum_probs=27.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
++.++|+|+ |++|..++..+. .|++|+.++++.+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~ 35 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEE 35 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHH
Confidence 457889996 799999888774 7999999988643
No 378
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.49 E-value=0.038 Score=39.32 Aligned_cols=87 Identities=17% Similarity=0.177 Sum_probs=61.6
Q ss_pred HHcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCCCC-------------Cc-------chHHHHHHhHcC
Q 041355 10 LVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEK-------------EE-------PDLDAALKRWFP 67 (180)
Q Consensus 10 ~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g--~~vi~~~~~~~~-------------~~-------~~~~~~~~~~~~ 67 (180)
...+.....+||-.| +++|+.++.+|..+. .+++++..++++ .+ .+..+.+.+...
T Consensus 53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~ 130 (219)
T COG4122 53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLD 130 (219)
T ss_pred HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccC
Confidence 344556778899887 668999999999876 478888887775 11 244445555334
Q ss_pred CCccEEEeCCC-hh---hHHHHHHhhccCCEEEEE
Q 041355 68 QGIDIYFENVG-GK---MLDAVLLNMRLRGRIAVS 98 (180)
Q Consensus 68 ~~~d~~~d~~g-~~---~~~~~~~~l~~~G~~v~~ 98 (180)
+.||++|-=.. .. .++.+++.|+++|-++.=
T Consensus 131 ~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D 165 (219)
T COG4122 131 GSFDLVFIDADKADYPEYLERALPLLRPGGLIVAD 165 (219)
T ss_pred CCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence 58999865444 22 688899999999988764
No 379
>PLN00016 RNA-binding protein; Provisional
Probab=96.46 E-value=0.034 Score=43.00 Aligned_cols=85 Identities=19% Similarity=0.170 Sum_probs=57.8
Q ss_pred CCEEEEe----cCCchHHHHHHHHHHHcCCEEEEEeCCCCCC----------------------cchHHHHHHhHcCC-C
Q 041355 17 GEYVYVS----AASGAVGQLVGQFAKLAGCYVVGSAGSKEKE----------------------EPDLDAALKRWFPQ-G 69 (180)
Q Consensus 17 g~~vlI~----Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~----------------------~~~~~~~~~~~~~~-~ 69 (180)
..+|||+ ||+|-+|..+++.+...|.+|++++++.... ..++.+ +.+.... +
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d-~~~~~~~~~ 130 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD-VKSKVAGAG 130 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH-HHhhhccCC
Confidence 4679999 9999999999998888899999999876420 011211 2222233 7
Q ss_pred ccEEEeCCChh--hHHHHHHhhccCC--EEEEEeccc
Q 041355 70 IDIYFENVGGK--MLDAVLLNMRLRG--RIAVSSIIS 102 (180)
Q Consensus 70 ~d~~~d~~g~~--~~~~~~~~l~~~G--~~v~~~~~~ 102 (180)
+|+++++.+.+ ....++..++..| +++.+++..
T Consensus 131 ~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~ 167 (378)
T PLN00016 131 FDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAG 167 (378)
T ss_pred ccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHh
Confidence 99999998754 3445556554333 788776654
No 380
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.0087 Score=43.44 Aligned_cols=63 Identities=25% Similarity=0.396 Sum_probs=44.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC------Cc------chH--HHHHHhHcCCCccEEEeCCCh
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK------EE------PDL--DAALKRWFPQGIDIYFENVGG 79 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~------~~------~~~--~~~~~~~~~~~~d~~~d~~g~ 79 (180)
.|.+++|+||+|++|..+++.+...|++|+++++++.. .. -|+ .+.+.+.. +++|+++.+.|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~iDilVnnAG~ 89 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQL-ASLDVLILNHGI 89 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhc-CCCCEEEECCcc
Confidence 36899999999999999999888899999998886521 00 000 11222222 369999999874
No 381
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.45 E-value=0.014 Score=42.33 Aligned_cols=35 Identities=20% Similarity=0.103 Sum_probs=29.5
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCC
Q 041355 16 KGEYVYVSAASG--AVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~g--~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.+.+++|+||++ ++|...+..+...|++|++++++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 457899999884 89999888877789999998876
No 382
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.44 E-value=0.061 Score=39.92 Aligned_cols=82 Identities=17% Similarity=0.031 Sum_probs=61.8
Q ss_pred HHcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHh
Q 041355 10 LVCSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLN 88 (180)
Q Consensus 10 ~~~~~~-~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~ 88 (180)
+..++. .|.+++|.|.+.-+|.-...++...|++|.++.+. ..++.+..++ .|+++.++|.+.+- --..
T Consensus 156 ~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~----T~~l~~~~~~-----ADIvv~AvG~p~~i-~~~~ 225 (287)
T PRK14176 156 EEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVF----TDDLKKYTLD-----ADILVVATGVKHLI-KADM 225 (287)
T ss_pred HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEecc----CCCHHHHHhh-----CCEEEEccCCcccc-CHHH
Confidence 444454 79999999988889999999999999988766642 2344444443 79999999987432 2357
Q ss_pred hccCCEEEEEecc
Q 041355 89 MRLRGRIAVSSII 101 (180)
Q Consensus 89 l~~~G~~v~~~~~ 101 (180)
++++..++.+|..
T Consensus 226 vk~gavVIDvGin 238 (287)
T PRK14176 226 VKEGAVIFDVGIT 238 (287)
T ss_pred cCCCcEEEEeccc
Confidence 8999999999874
No 383
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.44 E-value=0.045 Score=37.81 Aligned_cols=85 Identities=24% Similarity=0.349 Sum_probs=56.4
Q ss_pred HcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCCCC------C------------cchHHHHHHhHcCC-Cc
Q 041355 11 VCSPKKGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEK------E------------EPDLDAALKRWFPQ-GI 70 (180)
Q Consensus 11 ~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g-~~vi~~~~~~~~------~------------~~~~~~~~~~~~~~-~~ 70 (180)
..++++|+.++=.|+ +.|...+++++... .+|+++.++++. + ..+-.+.+. +- .+
T Consensus 29 ~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~---~~~~~ 103 (187)
T COG2242 29 KLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALP---DLPSP 103 (187)
T ss_pred hhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhc---CCCCC
Confidence 346789997776774 34778889995543 499999998775 0 001111111 11 58
Q ss_pred cEEEeCCChh---hHHHHHHhhccCCEEEEEec
Q 041355 71 DIYFENVGGK---MLDAVLLNMRLRGRIAVSSI 100 (180)
Q Consensus 71 d~~~d~~g~~---~~~~~~~~l~~~G~~v~~~~ 100 (180)
|.+|--=|.. .++.++..|+++|++|....
T Consensus 104 daiFIGGg~~i~~ile~~~~~l~~ggrlV~nai 136 (187)
T COG2242 104 DAIFIGGGGNIEEILEAAWERLKPGGRLVANAI 136 (187)
T ss_pred CEEEECCCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence 8888544322 68889999999999988754
No 384
>PLN02928 oxidoreductase family protein
Probab=96.43 E-value=0.029 Score=42.94 Aligned_cols=83 Identities=19% Similarity=0.203 Sum_probs=56.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcch-----------H------HHHHHhHcCCCccEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPD-----------L------DAALKRWFPQGIDIYFENVG 78 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~-----------~------~~~~~~~~~~~~d~~~d~~g 78 (180)
.|.++.|+| .|.+|..+++.++.+|++|++..++....... + ...+.+.. ...|+++-++.
T Consensus 158 ~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell-~~aDiVvl~lP 235 (347)
T PLN02928 158 FGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFA-GEADIVVLCCT 235 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHH-hhCCEEEECCC
Confidence 478999999 99999999999999999999988763210000 0 00111111 13689888775
Q ss_pred h-h-h---H-HHHHHhhccCCEEEEEec
Q 041355 79 G-K-M---L-DAVLLNMRLRGRIAVSSI 100 (180)
Q Consensus 79 ~-~-~---~-~~~~~~l~~~G~~v~~~~ 100 (180)
. + + + ...+..++++..+++++-
T Consensus 236 lt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 236 LTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred CChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 2 2 1 1 356678899988888864
No 385
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.42 E-value=0.029 Score=42.72 Aligned_cols=84 Identities=18% Similarity=0.156 Sum_probs=55.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCc-chH---HHHHHhHcCCCccEEEeCCChh--h---H-HHH
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEE-PDL---DAALKRWFPQGIDIYFENVGGK--M---L-DAV 85 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~-~~~---~~~~~~~~~~~~d~~~d~~g~~--~---~-~~~ 85 (180)
.|.+|.|.| .|.+|....+.++.+|.+|++.+++..... ... ...+.+.. ...|+++-|+... + + ...
T Consensus 149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~l~ell-~~aDiV~l~lP~t~~T~~~i~~~~ 226 (333)
T PRK13243 149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEAEKELGAEYRPLEELL-RESDFVSLHVPLTKETYHMINEER 226 (333)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEecCHHHHH-hhCCEEEEeCCCChHHhhccCHHH
Confidence 578999999 999999999999999999998887643210 000 00111111 1368888877532 1 1 345
Q ss_pred HHhhccCCEEEEEecc
Q 041355 86 LLNMRLRGRIAVSSII 101 (180)
Q Consensus 86 ~~~l~~~G~~v~~~~~ 101 (180)
+..++++..+++++..
T Consensus 227 ~~~mk~ga~lIN~aRg 242 (333)
T PRK13243 227 LKLMKPTAILVNTARG 242 (333)
T ss_pred HhcCCCCeEEEECcCc
Confidence 6777888888887654
No 386
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.41 E-value=0.016 Score=41.20 Aligned_cols=90 Identities=14% Similarity=0.168 Sum_probs=57.1
Q ss_pred HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCCCC---CcchHHH----HH-------Hh-HcC-CC
Q 041355 8 IILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEK---EEPDLDA----AL-------KR-WFP-QG 69 (180)
Q Consensus 8 l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g--~~vi~~~~~~~~---~~~~~~~----~~-------~~-~~~-~~ 69 (180)
+.....+++|++||-.| + +.|..+..+++..+ .+|+++..+++. ..+.+.. ++ .. ... +.
T Consensus 68 ~~~~l~~~~g~~VLdIG-~-GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~~~~~~ 145 (212)
T PRK13942 68 MCELLDLKEGMKVLEIG-T-GSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYEENAP 145 (212)
T ss_pred HHHHcCCCCcCEEEEEC-C-cccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCcCCC
Confidence 33556789999999998 3 45778888888765 489998887653 0000000 00 00 011 36
Q ss_pred ccEEEeCCChh-hHHHHHHhhccCCEEEEEe
Q 041355 70 IDIYFENVGGK-MLDAVLLNMRLRGRIAVSS 99 (180)
Q Consensus 70 ~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~ 99 (180)
||.|+-+.... ......+.|+++|+++..-
T Consensus 146 fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~~ 176 (212)
T PRK13942 146 YDRIYVTAAGPDIPKPLIEQLKDGGIMVIPV 176 (212)
T ss_pred cCEEEECCCcccchHHHHHhhCCCcEEEEEE
Confidence 89986544433 5566778999999988763
No 387
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=96.40 E-value=0.081 Score=39.51 Aligned_cols=89 Identities=19% Similarity=0.237 Sum_probs=62.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------------Ccch---HHHHHHhHcCC-Cc
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------------EEPD---LDAALKRWFPQ-GI 70 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------------~~~~---~~~~~~~~~~~-~~ 70 (180)
++..|+|+|..++.|.....-+...|.+|++.|-.++. ++++ ..+.+++..+. +.
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL 107 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL 107 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence 45669999999999998888888889999999866543 2222 23456666665 78
Q ss_pred cEEEeCCChh---------------------------hHHHHHHhhc-cCCEEEEEeccccc
Q 041355 71 DIYFENVGGK---------------------------MLDAVLLNMR-LRGRIAVSSIISQY 104 (180)
Q Consensus 71 d~~~d~~g~~---------------------------~~~~~~~~l~-~~G~~v~~~~~~~~ 104 (180)
-.+++++|-. .....+..++ ..||++++++..+.
T Consensus 108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR 169 (322)
T KOG1610|consen 108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR 169 (322)
T ss_pred eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence 8888888710 0122334554 56999999988764
No 388
>PRK06436 glycerate dehydrogenase; Provisional
Probab=96.40 E-value=0.041 Score=41.32 Aligned_cols=84 Identities=13% Similarity=0.069 Sum_probs=55.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcc-hHHHHHHhHcCCCccEEEeCCChh--h---H-HHHHHh
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEP-DLDAALKRWFPQGIDIYFENVGGK--M---L-DAVLLN 88 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~d~~g~~--~---~-~~~~~~ 88 (180)
.|.+|.|.| .|.+|....++++.+|.+|++..++...... .....+.+.. ...|+++-++... + + ...+..
T Consensus 121 ~gktvgIiG-~G~IG~~vA~~l~afG~~V~~~~r~~~~~~~~~~~~~l~ell-~~aDiv~~~lp~t~~T~~li~~~~l~~ 198 (303)
T PRK06436 121 YNKSLGILG-YGGIGRRVALLAKAFGMNIYAYTRSYVNDGISSIYMEPEDIM-KKSDFVLISLPLTDETRGMINSKMLSL 198 (303)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcccCcccccCCHHHHH-hhCCEEEECCCCCchhhcCcCHHHHhc
Confidence 578999999 9999999999999999999999876432100 0001111111 1368888877632 1 1 345677
Q ss_pred hccCCEEEEEecc
Q 041355 89 MRLRGRIAVSSII 101 (180)
Q Consensus 89 l~~~G~~v~~~~~ 101 (180)
++++..+++++..
T Consensus 199 mk~ga~lIN~sRG 211 (303)
T PRK06436 199 FRKGLAIINVARA 211 (303)
T ss_pred CCCCeEEEECCCc
Confidence 8888888877653
No 389
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.37 E-value=0.062 Score=40.18 Aligned_cols=82 Identities=21% Similarity=0.219 Sum_probs=60.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-----------------CcchHHHHHHhHcCCCccEEEeCC
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-----------------EEPDLDAALKRWFPQGIDIYFENV 77 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-----------------~~~~~~~~~~~~~~~~~d~~~d~~ 77 (180)
.+++ |.|.| .|-+|.-+..+|-.+|++|...+.+..+ +...+.+.+. +.|+++.++
T Consensus 167 ~~~k-v~iiG-GGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaV 239 (371)
T COG0686 167 LPAK-VVVLG-GGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAV 239 (371)
T ss_pred CCcc-EEEEC-CccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEE
Confidence 4444 67778 7999999999999999999999998665 1122223332 468888765
Q ss_pred ---Chh----hHHHHHHhhccCCEEEEEecccc
Q 041355 78 ---GGK----MLDAVLLNMRLRGRIAVSSIISQ 103 (180)
Q Consensus 78 ---g~~----~~~~~~~~l~~~G~~v~~~~~~~ 103 (180)
|.. ..+..++.++|++.++.+....+
T Consensus 240 LIpgakaPkLvt~e~vk~MkpGsVivDVAiDqG 272 (371)
T COG0686 240 LIPGAKAPKLVTREMVKQMKPGSVIVDVAIDQG 272 (371)
T ss_pred EecCCCCceehhHHHHHhcCCCcEEEEEEEcCC
Confidence 322 56788899999999999987654
No 390
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.36 E-value=0.026 Score=42.08 Aligned_cols=40 Identities=25% Similarity=0.291 Sum_probs=35.9
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC
Q 041355 14 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK 53 (180)
Q Consensus 14 ~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~ 53 (180)
.++-..|+|.|++.++|++....++..|+.|..++++..+
T Consensus 30 ~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~k 69 (331)
T KOG1210|consen 30 PKPRRHILITGGSSGLGLALALECKREGADVTITARSGKK 69 (331)
T ss_pred cCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHH
Confidence 3445789999999999999999999999999999999776
No 391
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.34 E-value=0.034 Score=40.17 Aligned_cols=93 Identities=23% Similarity=0.252 Sum_probs=63.9
Q ss_pred HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC------Ccch-------H-HHHHHhH-cC-CCc
Q 041355 8 IILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK------EEPD-------L-DAALKRW-FP-QGI 70 (180)
Q Consensus 8 l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~------~~~~-------~-~~~~~~~-~~-~~~ 70 (180)
+.....+.+|++||=.+ +++|-.++.+++..|- +|++++.+++- +..+ + ....... .+ +.|
T Consensus 43 ~i~~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sF 120 (238)
T COG2226 43 LISLLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSF 120 (238)
T ss_pred HHHhhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCcc
Confidence 33445566899998654 5679999999999875 89999998764 1111 0 0111111 22 379
Q ss_pred cEEEeCCChh-------hHHHHHHhhccCCEEEEEeccc
Q 041355 71 DIYFENVGGK-------MLDAVLLNMRLRGRIAVSSIIS 102 (180)
Q Consensus 71 d~~~d~~g~~-------~~~~~~~~l~~~G~~v~~~~~~ 102 (180)
|++.-+.|-. .+..+.++|+|+|+++.+....
T Consensus 121 D~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~ 159 (238)
T COG2226 121 DAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK 159 (238)
T ss_pred CEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence 9987777632 6788889999999999997754
No 392
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=96.33 E-value=0.012 Score=42.08 Aligned_cols=32 Identities=22% Similarity=0.222 Sum_probs=28.3
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 20 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 20 vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
++|+||+|++|...++.+...|++|+++++++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~ 32 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSG 32 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCC
Confidence 58999999999999998888999998888764
No 393
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.29 E-value=0.054 Score=38.74 Aligned_cols=81 Identities=11% Similarity=0.092 Sum_probs=53.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHH---------HhHcC---CCccEEEeCCChhhHH
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAAL---------KRWFP---QGIDIYFENVGGKMLD 83 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~---------~~~~~---~~~d~~~d~~g~~~~~ 83 (180)
++.+|||.| +|.++.-=++.+...|++|.+++..-.. ++.... +.+.. .++++||-|++.+.++
T Consensus 24 ~~~~VLVVG-GG~VA~RK~~~Ll~~gA~VtVVap~i~~---el~~l~~~~~i~~~~r~~~~~dl~g~~LViaATdD~~vN 99 (223)
T PRK05562 24 NKIKVLIIG-GGKAAFIKGKTFLKKGCYVYILSKKFSK---EFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIATDDEKLN 99 (223)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCCCH---HHHHHHhCCCEEEEeCCCChHHhCCCcEEEECCCCHHHH
Confidence 477899999 8999988788888899998887765321 111110 01111 2689999999988777
Q ss_pred HHHHhh-ccCCEEEEEec
Q 041355 84 AVLLNM-RLRGRIAVSSI 100 (180)
Q Consensus 84 ~~~~~l-~~~G~~v~~~~ 100 (180)
..+... +..+.+++...
T Consensus 100 ~~I~~~a~~~~~lvn~vd 117 (223)
T PRK05562 100 NKIRKHCDRLYKLYIDCS 117 (223)
T ss_pred HHHHHHHHHcCCeEEEcC
Confidence 666554 45576666543
No 394
>PRK04148 hypothetical protein; Provisional
Probab=96.29 E-value=0.012 Score=38.57 Aligned_cols=40 Identities=15% Similarity=0.005 Sum_probs=29.9
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC
Q 041355 12 CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK 53 (180)
Q Consensus 12 ~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~ 53 (180)
..-.++.++++.| +| .|....+.+...|.+|++++.++..
T Consensus 12 ~~~~~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~a 51 (134)
T PRK04148 12 YEKGKNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKA 51 (134)
T ss_pred cccccCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHH
Confidence 3334568899999 77 7875555555789999999998663
No 395
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.27 E-value=0.073 Score=39.51 Aligned_cols=83 Identities=20% Similarity=0.136 Sum_probs=62.9
Q ss_pred HHcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHh
Q 041355 10 LVCSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLN 88 (180)
Q Consensus 10 ~~~~~~-~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~ 88 (180)
+.-++. .|.+++|.|.+..+|.=+..++...|+.|..+.+. ..++.+.+++ .|+++-++|.+.+- --..
T Consensus 147 ~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~----T~~l~~~~~~-----ADIvIsAvGkp~~i-~~~~ 216 (287)
T PRK14173 147 KHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSK----TQDLPAVTRR-----ADVLVVAVGRPHLI-TPEM 216 (287)
T ss_pred HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCC----CCCHHHHHhh-----CCEEEEecCCcCcc-CHHH
Confidence 444454 79999999999999999999999899988765542 3345545554 79999999987443 2367
Q ss_pred hccCCEEEEEeccc
Q 041355 89 MRLRGRIAVSSIIS 102 (180)
Q Consensus 89 l~~~G~~v~~~~~~ 102 (180)
++++..++.+|...
T Consensus 217 vk~GavVIDVGin~ 230 (287)
T PRK14173 217 VRPGAVVVDVGINR 230 (287)
T ss_pred cCCCCEEEEccCcc
Confidence 89999999998754
No 396
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.25 E-value=0.2 Score=33.93 Aligned_cols=79 Identities=19% Similarity=0.119 Sum_probs=52.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHhhccCCE
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGR 94 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~ 94 (180)
-.|++++|.|.+..+|.-+..++...|+.|..+.+. .+++.+.++ ..|+++-++|.+.+-. -..++++..
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~----T~~l~~~~~-----~ADIVVsa~G~~~~i~-~~~ik~gav 103 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSK----TKNLQEITR-----RADIVVSAVGKPNLIK-ADWIKPGAV 103 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TT----SSSHHHHHT-----TSSEEEE-SSSTT-B--GGGS-TTEE
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCC----CCcccceee-----eccEEeeeeccccccc-cccccCCcE
Confidence 479999999999999999999999999999875553 334444444 3799999999774421 146788888
Q ss_pred EEEEecccc
Q 041355 95 IAVSSIISQ 103 (180)
Q Consensus 95 ~v~~~~~~~ 103 (180)
++.+|....
T Consensus 104 VIDvG~~~~ 112 (160)
T PF02882_consen 104 VIDVGINYV 112 (160)
T ss_dssp EEE--CEEE
T ss_pred EEecCCccc
Confidence 888877543
No 397
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.24 E-value=0.018 Score=42.14 Aligned_cols=34 Identities=9% Similarity=0.125 Sum_probs=28.2
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeC
Q 041355 16 KGEYVYVSAA--SGAVGQLVGQFAKLAGCYVVGSAG 49 (180)
Q Consensus 16 ~g~~vlI~Ga--~g~vG~~~iqlak~~g~~vi~~~~ 49 (180)
.+++++|+|| ++++|.++++.+...|++|+.+.+
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~ 40 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYV 40 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEcc
Confidence 4788999996 579999988888788999987654
No 398
>PRK05599 hypothetical protein; Provisional
Probab=96.24 E-value=0.015 Score=42.07 Aligned_cols=33 Identities=15% Similarity=0.142 Sum_probs=26.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+++|+||++++|...++.+. .|++|+.++++.+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~ 34 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPE 34 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHH
Confidence 58999999999998777655 4899999887654
No 399
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.23 E-value=0.034 Score=43.04 Aligned_cols=80 Identities=21% Similarity=0.171 Sum_probs=52.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCCCC-----------------CcchHHHHHHhHcCCCccEEEeCCCh
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEK-----------------EEPDLDAALKRWFPQGIDIYFENVGG 79 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g-~~vi~~~~~~~~-----------------~~~~~~~~~~~~~~~~~d~~~d~~g~ 79 (180)
.+|+|.| +|.||+.+++.+-..+ .+|++.+++.++ +..+ .+.+.+... ++|++++|...
T Consensus 2 ~~ilviG-aG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d-~~al~~li~-~~d~VIn~~p~ 78 (389)
T COG1748 2 MKILVIG-AGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD-VDALVALIK-DFDLVINAAPP 78 (389)
T ss_pred CcEEEEC-CchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC-hHHHHHHHh-cCCEEEEeCCc
Confidence 4689999 6999999999987777 699999999665 0001 111222211 35999999987
Q ss_pred hhHHHHH-HhhccCCEEEEEec
Q 041355 80 KMLDAVL-LNMRLRGRIAVSSI 100 (180)
Q Consensus 80 ~~~~~~~-~~l~~~G~~v~~~~ 100 (180)
..-..++ .|++.+=.++.+..
T Consensus 79 ~~~~~i~ka~i~~gv~yvDts~ 100 (389)
T COG1748 79 FVDLTILKACIKTGVDYVDTSY 100 (389)
T ss_pred hhhHHHHHHHHHhCCCEEEccc
Confidence 6333455 45555556666644
No 400
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=96.22 E-value=0.016 Score=42.50 Aligned_cols=61 Identities=18% Similarity=0.242 Sum_probs=46.1
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcch------HHHHHHhHcCCCccEEEeCCChh
Q 041355 20 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPD------LDAALKRWFPQGIDIYFENVGGK 80 (180)
Q Consensus 20 vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~------~~~~~~~~~~~~~d~~~d~~g~~ 80 (180)
|+|+||+|-+|...++.++..|-+|+++.|++.+.+.. ..+.+.+....++|++++-+|.+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~~~DavINLAG~~ 67 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWEGLADALTLGIDAVINLAGEP 67 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCccccccchhhhcccCCCCEEEECCCCc
Confidence 68999999999999999999999999999998772211 22333333333799999988863
No 401
>PRK07069 short chain dehydrogenase; Validated
Probab=96.20 E-value=0.018 Score=41.47 Aligned_cols=31 Identities=16% Similarity=0.314 Sum_probs=28.3
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 20 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 20 vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
++|+||+|++|...++.+...|++|+.++++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~ 32 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDIN 32 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 7999999999999888888889999999887
No 402
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=96.19 E-value=0.012 Score=43.35 Aligned_cols=59 Identities=17% Similarity=0.155 Sum_probs=41.7
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcc----hH---H-HHHHhHcCCCccEEEeCCCh
Q 041355 20 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEP----DL---D-AALKRWFPQGIDIYFENVGG 79 (180)
Q Consensus 20 vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~----~~---~-~~~~~~~~~~~d~~~d~~g~ 79 (180)
|||+||+|-+|...++.+...|.+|++++++...... .+ . ....+. -.++|+++.|++.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEA-LEGADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccccchhhh-cCCCCEEEECCCC
Confidence 6899999999999999888889999999987765110 00 0 011111 1269999999873
No 403
>PLN02240 UDP-glucose 4-epimerase
Probab=96.17 E-value=0.028 Score=42.82 Aligned_cols=34 Identities=26% Similarity=0.265 Sum_probs=29.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
+.+|+|+||+|.+|...++.+...|.+|+++++.
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~ 38 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL 38 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999999998888889999988653
No 404
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.17 E-value=0.023 Score=42.81 Aligned_cols=38 Identities=24% Similarity=0.331 Sum_probs=34.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK 53 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~ 53 (180)
.|.+++|+||.+++|...+.-+...|++|+.++|+.++
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~ 71 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEER 71 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 56789999999999999999999999999999999754
No 405
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.16 E-value=0.067 Score=40.70 Aligned_cols=83 Identities=13% Similarity=0.122 Sum_probs=55.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcc--hHHHHHHhHcCCCccEEEeCCChh--h----HHHHHH
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEP--DLDAALKRWFPQGIDIYFENVGGK--M----LDAVLL 87 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~--~~~~~~~~~~~~~~d~~~d~~g~~--~----~~~~~~ 87 (180)
.|.+|.|.| .|.+|....+.++..|.+|++.+++...... .....+.+.. ...|+++-++... + ....+.
T Consensus 145 ~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell-~~aDiVil~lP~t~~t~~li~~~~l~ 222 (330)
T PRK12480 145 KNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAI-KDADIISLHVPANKESYHLFDKAMFD 222 (330)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHH-hcCCEEEEeCCCcHHHHHHHhHHHHh
Confidence 567899999 9999999999999999999999877543110 0000111111 1578988887632 1 234456
Q ss_pred hhccCCEEEEEec
Q 041355 88 NMRLRGRIAVSSI 100 (180)
Q Consensus 88 ~l~~~G~~v~~~~ 100 (180)
.++++..+++++-
T Consensus 223 ~mk~gavlIN~aR 235 (330)
T PRK12480 223 HVKKGAILVNAAR 235 (330)
T ss_pred cCCCCcEEEEcCC
Confidence 7788888888864
No 406
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.15 E-value=0.12 Score=38.30 Aligned_cols=83 Identities=17% Similarity=0.092 Sum_probs=61.2
Q ss_pred HHcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHh
Q 041355 10 LVCSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLN 88 (180)
Q Consensus 10 ~~~~~~-~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~ 88 (180)
+..++. .|.+++|.|.+..+|.-...++...|++|....+. ..++.+.+++ .|+++.++|...+-. -..
T Consensus 144 ~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~----t~~L~~~~~~-----ADIvI~Avgk~~lv~-~~~ 213 (279)
T PRK14178 144 HEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSK----TENLKAELRQ-----ADILVSAAGKAGFIT-PDM 213 (279)
T ss_pred HHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecC----hhHHHHHHhh-----CCEEEECCCcccccC-HHH
Confidence 334443 78999999988899999999999999998877663 3344444543 799999999652211 134
Q ss_pred hccCCEEEEEeccc
Q 041355 89 MRLRGRIAVSSIIS 102 (180)
Q Consensus 89 l~~~G~~v~~~~~~ 102 (180)
++++..++.+|...
T Consensus 214 vk~GavVIDVgi~~ 227 (279)
T PRK14178 214 VKPGATVIDVGINQ 227 (279)
T ss_pred cCCCcEEEEeeccc
Confidence 79999999998753
No 407
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=96.14 E-value=0.042 Score=42.88 Aligned_cols=62 Identities=21% Similarity=0.274 Sum_probs=44.9
Q ss_pred CCCEEEEecC----------------CchHHHHHHHHHHHcCCEEEEEeCCCCC------------CcchHHHHHHhHcC
Q 041355 16 KGEYVYVSAA----------------SGAVGQLVGQFAKLAGCYVVGSAGSKEK------------EEPDLDAALKRWFP 67 (180)
Q Consensus 16 ~g~~vlI~Ga----------------~g~vG~~~iqlak~~g~~vi~~~~~~~~------------~~~~~~~~~~~~~~ 67 (180)
.|.+++|+|| +|.+|.+.++.+...|++|+.++++... +..+..+.+.+..
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~~~~~~~~dv~~~~~~~~~v~~~~- 265 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPTPAGVKRIDVESAQEMLDAVLAAL- 265 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccCCCCcEEEccCCHHHHHHHHHHhc-
Confidence 6889999998 6669999999999999999988776431 2223333343332
Q ss_pred CCccEEEeCCC
Q 041355 68 QGIDIYFENVG 78 (180)
Q Consensus 68 ~~~d~~~d~~g 78 (180)
+.+|+++.+.+
T Consensus 266 ~~~DilI~~Aa 276 (399)
T PRK05579 266 PQADIFIMAAA 276 (399)
T ss_pred CCCCEEEEccc
Confidence 36888888876
No 408
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.14 E-value=0.099 Score=34.01 Aligned_cols=31 Identities=13% Similarity=0.201 Sum_probs=26.1
Q ss_pred EEEecCCchHHHHHHHHHHHcC--CEEEEEeCC
Q 041355 20 VYVSAASGAVGQLVGQFAKLAG--CYVVGSAGS 50 (180)
Q Consensus 20 vlI~Ga~g~vG~~~iqlak~~g--~~vi~~~~~ 50 (180)
|.|.|++|++|.-++++.+.+. ++|++..-.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~ 33 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAG 33 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcC
Confidence 5799999999999999999887 588775543
No 409
>PLN03075 nicotianamine synthase; Provisional
Probab=96.12 E-value=0.042 Score=40.95 Aligned_cols=84 Identities=17% Similarity=0.089 Sum_probs=56.9
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCCCC---------CcchHH-------HHHHhHcC--CCccEEE
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEK---------EEPDLD-------AALKRWFP--QGIDIYF 74 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~--g~~vi~~~~~~~~---------~~~~~~-------~~~~~~~~--~~~d~~~ 74 (180)
.+.++|+-.| +|+.++.++-+++.+ +.+++.++.+++. ...++. ..+.+... ++||+||
T Consensus 122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF 200 (296)
T PLN03075 122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVF 200 (296)
T ss_pred CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEE
Confidence 3778999999 999999888888654 4479999988765 111111 11122222 4899997
Q ss_pred eCC------Chh--hHHHHHHhhccCCEEEEEe
Q 041355 75 ENV------GGK--MLDAVLLNMRLRGRIAVSS 99 (180)
Q Consensus 75 d~~------g~~--~~~~~~~~l~~~G~~v~~~ 99 (180)
-.+ ... .+.++.+.|+|+|.++.=.
T Consensus 201 ~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 201 LAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred EecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 764 122 6788889999999997653
No 410
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.12 E-value=0.053 Score=40.03 Aligned_cols=83 Identities=18% Similarity=0.108 Sum_probs=62.0
Q ss_pred HHcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHh
Q 041355 10 LVCSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLN 88 (180)
Q Consensus 10 ~~~~~~-~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~ 88 (180)
+.-++. .|++++|.|.+.-+|.=+..++...|++|..+.+. ..++.+..++ .|+++-++|...+-. -..
T Consensus 150 ~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~----T~~l~~~~~~-----ADIvIsAvGkp~~i~-~~~ 219 (278)
T PRK14172 150 KSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSK----TKNLKEVCKK-----ADILVVAIGRPKFID-EEY 219 (278)
T ss_pred HHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC----CCCHHHHHhh-----CCEEEEcCCCcCccC-HHH
Confidence 333443 79999999999999999999999999988765542 3345444544 799999999874421 356
Q ss_pred hccCCEEEEEeccc
Q 041355 89 MRLRGRIAVSSIIS 102 (180)
Q Consensus 89 l~~~G~~v~~~~~~ 102 (180)
++++..++.+|...
T Consensus 220 ik~gavVIDvGin~ 233 (278)
T PRK14172 220 VKEGAIVIDVGTSS 233 (278)
T ss_pred cCCCcEEEEeeccc
Confidence 89999999998644
No 411
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.11 E-value=0.049 Score=40.30 Aligned_cols=77 Identities=23% Similarity=0.200 Sum_probs=60.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHhhccCCEE
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRI 95 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~ 95 (180)
.|.+++|.|.+.-+|.=+..++...|++|..+.+. ..++.+..++ .|+++-++|.+.+-. -..++++..+
T Consensus 157 ~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~----T~dl~~~~k~-----ADIvIsAvGkp~~i~-~~~vk~gavV 226 (282)
T PRK14180 157 EGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF----TTDLKSHTTK-----ADILIVAVGKPNFIT-ADMVKEGAVV 226 (282)
T ss_pred CCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCC----CCCHHHHhhh-----cCEEEEccCCcCcCC-HHHcCCCcEE
Confidence 69999999999999999999999999988765442 3345444444 799999999874422 2678999999
Q ss_pred EEEeccc
Q 041355 96 AVSSIIS 102 (180)
Q Consensus 96 v~~~~~~ 102 (180)
+.+|...
T Consensus 227 IDvGin~ 233 (282)
T PRK14180 227 IDVGINH 233 (282)
T ss_pred EEecccc
Confidence 9998743
No 412
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=96.10 E-value=0.021 Score=43.58 Aligned_cols=48 Identities=8% Similarity=-0.036 Sum_probs=38.1
Q ss_pred hHHHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 3 IVGNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 3 ~a~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
+||.-+..... -.+.+|+|+||+|-+|..++..+...|.+|+++++..
T Consensus 2 ~~~~~~~~~~~-~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~ 49 (348)
T PRK15181 2 TAYEELRTKLV-LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFS 49 (348)
T ss_pred chhhhhhhccc-ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 56776643333 3457899999999999999999988899999998743
No 413
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=96.09 E-value=0.036 Score=42.76 Aligned_cols=37 Identities=19% Similarity=0.326 Sum_probs=32.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
..+.+|+|+||+|-+|..++..+...|.+|+++++..
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~ 55 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKK 55 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecc
Confidence 3568899999999999999999999999999988753
No 414
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=96.08 E-value=0.023 Score=42.21 Aligned_cols=61 Identities=26% Similarity=0.310 Sum_probs=37.2
Q ss_pred EEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC------------Ccc-----------h--HHHHHHhHcCC-CccE
Q 041355 20 VYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK------------EEP-----------D--LDAALKRWFPQ-GIDI 72 (180)
Q Consensus 20 vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~------------~~~-----------~--~~~~~~~~~~~-~~d~ 72 (180)
|||+||+|++|...++-+..++. +++.+++++.. ..+ | -.+.+...... ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 79999999999987777776776 78888888665 000 1 12344555555 8999
Q ss_pred EEeCCChh
Q 041355 73 YFENVGGK 80 (180)
Q Consensus 73 ~~d~~g~~ 80 (180)
+|.++.-.
T Consensus 81 VfHaAA~K 88 (293)
T PF02719_consen 81 VFHAAALK 88 (293)
T ss_dssp EEE-----
T ss_pred EEEChhcC
Confidence 99988753
No 415
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.08 E-value=0.097 Score=37.72 Aligned_cols=85 Identities=15% Similarity=0.113 Sum_probs=52.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC------------------------------Cc-------chH
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK------------------------------EE-------PDL 58 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~------------------------------~~-------~~~ 58 (180)
...|+|.| .|+||..++..+-..|+ ++..++-.+-. ++ .++
T Consensus 30 ~~~V~VvG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 30 QAHVCVVG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hCcEEEEe-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 35789999 99999999988888887 55554443221 00 011
Q ss_pred --HHHHHhHcCCCccEEEeCCChhh-HHHHHH-hhccCCEEEEEeccc
Q 041355 59 --DAALKRWFPQGIDIYFENVGGKM-LDAVLL-NMRLRGRIAVSSIIS 102 (180)
Q Consensus 59 --~~~~~~~~~~~~d~~~d~~g~~~-~~~~~~-~l~~~G~~v~~~~~~ 102 (180)
.+++.+....++|+++||..+-. =..++. |.+.+=.++..+..+
T Consensus 109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag 156 (263)
T COG1179 109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAG 156 (263)
T ss_pred hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecccc
Confidence 23444555558999999998652 223444 444444566655444
No 416
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.07 E-value=0.037 Score=38.82 Aligned_cols=90 Identities=13% Similarity=0.054 Sum_probs=55.4
Q ss_pred HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------Cc---chH---HHHHHhH-cCCCccE
Q 041355 8 IILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------EE---PDL---DAALKRW-FPQGIDI 72 (180)
Q Consensus 8 l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------~~---~~~---~~~~~~~-~~~~~d~ 72 (180)
+.+.....++.+||-.| +| .|..+..+++. |.+|++++.+++. .. ..+ ...+.+. ..+.||+
T Consensus 22 l~~~l~~~~~~~vLDiG-cG-~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~ 98 (197)
T PRK11207 22 VLEAVKVVKPGKTLDLG-CG-NGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNLTFDGEYDF 98 (197)
T ss_pred HHHhcccCCCCcEEEEC-CC-CCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhCCcCCCcCE
Confidence 44555566778899998 44 47778888875 7899999998653 00 000 0111111 1236999
Q ss_pred EEeCCCh---------hhHHHHHHhhccCCEEEEEec
Q 041355 73 YFENVGG---------KMLDAVLLNMRLRGRIAVSSI 100 (180)
Q Consensus 73 ~~d~~g~---------~~~~~~~~~l~~~G~~v~~~~ 100 (180)
|+.+..- ..+..+.+.|+|+|.++.+..
T Consensus 99 I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~~ 135 (197)
T PRK11207 99 ILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 135 (197)
T ss_pred EEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence 9865331 145566788999999755443
No 417
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.05 E-value=0.053 Score=40.47 Aligned_cols=77 Identities=21% Similarity=0.161 Sum_probs=57.4
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhh-HHHHHHhhccCC
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKM-LDAVLLNMRLRG 93 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~-~~~~~~~l~~~G 93 (180)
-.|.+|+|+|.++.+|.-++.++...|+.|.+..+. ..++.+..+ ..|+++-|+|... +... .++++.
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~r----T~~l~e~~~-----~ADIVIsavg~~~~v~~~--~lk~Ga 224 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSR----TRDLPAVCR-----RADILVAAVGRPEMVKGD--WIKPGA 224 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCC----CCCHHHHHh-----cCCEEEEecCChhhcchh--eecCCC
Confidence 379999999999999999999998899998877432 112322232 3799999999773 3332 388999
Q ss_pred EEEEEeccc
Q 041355 94 RIAVSSIIS 102 (180)
Q Consensus 94 ~~v~~~~~~ 102 (180)
.++.+|...
T Consensus 225 vVIDvGin~ 233 (296)
T PRK14188 225 TVIDVGINR 233 (296)
T ss_pred EEEEcCCcc
Confidence 999988754
No 418
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.05 E-value=0.14 Score=38.04 Aligned_cols=83 Identities=20% Similarity=0.135 Sum_probs=62.0
Q ss_pred HHcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHh
Q 041355 10 LVCSP-KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLN 88 (180)
Q Consensus 10 ~~~~~-~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~ 88 (180)
+.-++ -.|.+++|.|.+.-+|.-+..++...|+.|..+.+ +..++.+.+++ .|+++-++|.+.+-. -..
T Consensus 150 ~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs----~t~~l~~~~~~-----ADIvI~AvG~p~~i~-~~~ 219 (284)
T PRK14190 150 KEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHS----KTKNLAELTKQ-----ADILIVAVGKPKLIT-ADM 219 (284)
T ss_pred HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeC----CchhHHHHHHh-----CCEEEEecCCCCcCC-HHH
Confidence 33344 37999999999999999999999999998886544 23344444444 799999999774311 256
Q ss_pred hccCCEEEEEeccc
Q 041355 89 MRLRGRIAVSSIIS 102 (180)
Q Consensus 89 l~~~G~~v~~~~~~ 102 (180)
++++..++.+|...
T Consensus 220 ik~gavVIDvGi~~ 233 (284)
T PRK14190 220 VKEGAVVIDVGVNR 233 (284)
T ss_pred cCCCCEEEEeeccc
Confidence 79999999998754
No 419
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.04 E-value=0.061 Score=40.19 Aligned_cols=82 Identities=21% Similarity=0.186 Sum_probs=59.9
Q ss_pred HHcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChh-hHHHHHH
Q 041355 10 LVCSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGK-MLDAVLL 87 (180)
Q Consensus 10 ~~~~~~-~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~-~~~~~~~ 87 (180)
+.-++. .|++|.|.|.++.+|.-...++...|++|.+..+.. .+..+..+ ..|+++-++|.. .+...
T Consensus 151 ~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t----~~l~e~~~-----~ADIVIsavg~~~~v~~~-- 219 (301)
T PRK14194 151 EDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRS----TDAKALCR-----QADIVVAAVGRPRLIDAD-- 219 (301)
T ss_pred HHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCC----CCHHHHHh-----cCCEEEEecCChhcccHh--
Confidence 333443 699999999778999999999999999998876542 23333333 379999999976 33332
Q ss_pred hhccCCEEEEEeccc
Q 041355 88 NMRLRGRIAVSSIIS 102 (180)
Q Consensus 88 ~l~~~G~~v~~~~~~ 102 (180)
.++++..++.++...
T Consensus 220 ~ik~GaiVIDvgin~ 234 (301)
T PRK14194 220 WLKPGAVVIDVGINR 234 (301)
T ss_pred hccCCcEEEEecccc
Confidence 388999999988643
No 420
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=96.04 E-value=0.032 Score=41.66 Aligned_cols=59 Identities=14% Similarity=0.180 Sum_probs=39.6
Q ss_pred EEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------CcchHHHHHHhHcCCCccEEEeCCC
Q 041355 20 VYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EEPDLDAALKRWFPQGIDIYFENVG 78 (180)
Q Consensus 20 vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~~~~~~~~~~~~~~~~d~~~d~~g 78 (180)
|||+||+|.+|..+++.+...|. .|+++.+.... .+++..+.+.+..-.++|+++.+++
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~ 75 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGA 75 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECcc
Confidence 68999999999999999999998 68777654321 1111222222211147999999886
No 421
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.04 E-value=0.062 Score=39.78 Aligned_cols=77 Identities=17% Similarity=0.119 Sum_probs=60.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHhhccCCEE
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRI 95 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~ 95 (180)
.|++++|.|.+.-+|.=+..++...|+.|..+.+. ..++.+..++ .|+++-++|.+.+-. -..++++..+
T Consensus 155 ~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~----T~~l~~~~~~-----ADIvI~AvG~p~~i~-~~~vk~GavV 224 (282)
T PRK14169 155 AGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSK----TRNLKQLTKE-----ADILVVAVGVPHFIG-ADAVKPGAVV 224 (282)
T ss_pred CCCEEEEECCCccchHHHHHHHHHCCCEEEEECCC----CCCHHHHHhh-----CCEEEEccCCcCccC-HHHcCCCcEE
Confidence 79999999999999999999999999988765442 3345555554 699999999874422 3578999999
Q ss_pred EEEeccc
Q 041355 96 AVSSIIS 102 (180)
Q Consensus 96 v~~~~~~ 102 (180)
+.+|...
T Consensus 225 IDvGin~ 231 (282)
T PRK14169 225 IDVGISR 231 (282)
T ss_pred EEeeccc
Confidence 9998754
No 422
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=96.04 E-value=0.065 Score=38.56 Aligned_cols=80 Identities=26% Similarity=0.304 Sum_probs=53.3
Q ss_pred cCC--chHHHHHHHHHHHcCCEEEEEeCCCCC----------------------Ccch---HHHHHHhHcCCCccEEEeC
Q 041355 24 AAS--GAVGQLVGQFAKLAGCYVVGSAGSKEK----------------------EEPD---LDAALKRWFPQGIDIYFEN 76 (180)
Q Consensus 24 Ga~--g~vG~~~iqlak~~g~~vi~~~~~~~~----------------------~~~~---~~~~~~~~~~~~~d~~~d~ 76 (180)
|++ +++|.+.++-+...|++|+.+.++.++ ++++ +.+.+.+..++++|+++.+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 445 889999888888899999999888764 1222 2233444444689988876
Q ss_pred CChh------------------------------hHHHHHHhhccCCEEEEEecccc
Q 041355 77 VGGK------------------------------MLDAVLLNMRLRGRIAVSSIISQ 103 (180)
Q Consensus 77 ~g~~------------------------------~~~~~~~~l~~~G~~v~~~~~~~ 103 (180)
.+.. ....+++.++++|.++.+.+...
T Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~ 137 (241)
T PF13561_consen 81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAA 137 (241)
T ss_dssp EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGG
T ss_pred ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhh
Confidence 5421 01344567788899988876643
No 423
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.02 E-value=0.042 Score=38.75 Aligned_cols=89 Identities=13% Similarity=0.113 Sum_probs=56.6
Q ss_pred HHHcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCCCC---CcchHH------------HHHHhH-c-CCC
Q 041355 9 ILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEK---EEPDLD------------AALKRW-F-PQG 69 (180)
Q Consensus 9 ~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g--~~vi~~~~~~~~---~~~~~~------------~~~~~~-~-~~~ 69 (180)
.+...++++++||-.| + +.|..+..+++..+ .+|++++.+++. ..+.+. ....+. . .+.
T Consensus 65 ~~~l~~~~~~~VLDiG-~-GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~~~~~ 142 (205)
T PRK13944 65 CELIEPRPGMKILEVG-T-GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLEKHAP 142 (205)
T ss_pred HHhcCCCCCCEEEEEC-c-CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCccCCC
Confidence 3556678999999888 4 35888888888764 589999988653 000000 000010 1 126
Q ss_pred ccEEEeCCChh-hHHHHHHhhccCCEEEEEe
Q 041355 70 IDIYFENVGGK-MLDAVLLNMRLRGRIAVSS 99 (180)
Q Consensus 70 ~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~ 99 (180)
||.++-+.... ....+.+.|+++|+++...
T Consensus 143 fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~ 173 (205)
T PRK13944 143 FDAIIVTAAASTIPSALVRQLKDGGVLVIPV 173 (205)
T ss_pred ccEEEEccCcchhhHHHHHhcCcCcEEEEEE
Confidence 89887665544 4456678999999997653
No 424
>PLN02583 cinnamoyl-CoA reductase
Probab=96.00 E-value=0.02 Score=42.75 Aligned_cols=36 Identities=25% Similarity=0.173 Sum_probs=31.9
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.++.+|+|+||+|.+|..+++.+...|++|+++.++
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~ 39 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQK 39 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 356789999999999999999998899999998874
No 425
>PRK14967 putative methyltransferase; Provisional
Probab=95.96 E-value=0.062 Score=38.42 Aligned_cols=41 Identities=22% Similarity=0.159 Sum_probs=31.8
Q ss_pred HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC
Q 041355 10 LVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK 53 (180)
Q Consensus 10 ~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~ 53 (180)
....++++++||-.| +|+ |..++.+++. ++ +|++++.++..
T Consensus 30 ~~~~~~~~~~vLDlG-cG~-G~~~~~la~~-~~~~v~~vD~s~~~ 71 (223)
T PRK14967 30 AAEGLGPGRRVLDLC-TGS-GALAVAAAAA-GAGSVTAVDISRRA 71 (223)
T ss_pred HhcccCCCCeEEEec-CCH-HHHHHHHHHc-CCCeEEEEECCHHH
Confidence 334578899999998 665 8888888875 55 89999887654
No 426
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=95.95 E-value=0.04 Score=41.18 Aligned_cols=32 Identities=13% Similarity=0.129 Sum_probs=26.6
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 20 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 20 vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
|||+||+|-+|..+++.+...|.+++++.++.
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~ 33 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNL 33 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCC
Confidence 78999999999999998888898766665543
No 427
>PLN02476 O-methyltransferase
Probab=95.95 E-value=0.091 Score=38.91 Aligned_cols=89 Identities=13% Similarity=0.119 Sum_probs=59.1
Q ss_pred HHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCCCC-------------------CcchHHHHHHhHc
Q 041355 8 IILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEK-------------------EEPDLDAALKRWF 66 (180)
Q Consensus 8 l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g--~~vi~~~~~~~~-------------------~~~~~~~~~~~~~ 66 (180)
+....+....++||-.| +++|..++.+++.++ .+|+++..+++. ...+..+.+.+..
T Consensus 110 L~~L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~ 187 (278)
T PLN02476 110 LAMLVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMI 187 (278)
T ss_pred HHHHHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH
Confidence 33445566788999988 467888888898774 478888888764 1122333333321
Q ss_pred ----CCCccEEEeCCChh----hHHHHHHhhccCCEEEEE
Q 041355 67 ----PQGIDIYFENVGGK----MLDAVLLNMRLRGRIAVS 98 (180)
Q Consensus 67 ----~~~~d~~~d~~g~~----~~~~~~~~l~~~G~~v~~ 98 (180)
.+.||++|--.... .++.+++.|+++|.++.=
T Consensus 188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D 227 (278)
T PLN02476 188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD 227 (278)
T ss_pred hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 24799986544432 577888999999998753
No 428
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.95 E-value=0.067 Score=39.90 Aligned_cols=83 Identities=17% Similarity=0.081 Sum_probs=62.4
Q ss_pred HHcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHh
Q 041355 10 LVCSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLN 88 (180)
Q Consensus 10 ~~~~~~-~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~ 88 (180)
+.-++. .|++++|.|.+.-+|.=+..++...|++|..+.+. ..++.+.+++ .|+++-++|.+.+-. -..
T Consensus 150 ~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~----T~~l~~~~~~-----ADIvIsAvGkp~~i~-~~~ 219 (297)
T PRK14186 150 RSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSR----TQDLASITRE-----ADILVAAAGRPNLIG-AEM 219 (297)
T ss_pred HHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC----CCCHHHHHhh-----CCEEEEccCCcCccC-HHH
Confidence 333443 79999999999999999999999999988766442 3345444544 799999999774321 367
Q ss_pred hccCCEEEEEeccc
Q 041355 89 MRLRGRIAVSSIIS 102 (180)
Q Consensus 89 l~~~G~~v~~~~~~ 102 (180)
++++..++.+|...
T Consensus 220 ik~gavVIDvGin~ 233 (297)
T PRK14186 220 VKPGAVVVDVGIHR 233 (297)
T ss_pred cCCCCEEEEecccc
Confidence 89999999998754
No 429
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=95.95 E-value=0.039 Score=42.68 Aligned_cols=34 Identities=24% Similarity=0.119 Sum_probs=27.4
Q ss_pred CCCCEEEEecCCchHHHH--HHHHHHHcCCEEEEEeC
Q 041355 15 KKGEYVYVSAASGAVGQL--VGQFAKLAGCYVVGSAG 49 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~--~iqlak~~g~~vi~~~~ 49 (180)
.-|+++||+|+++++|++ ..+.+ ..|++++++..
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~ 74 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFF 74 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEec
Confidence 345789999999999999 55556 78998887764
No 430
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.94 E-value=0.14 Score=37.86 Aligned_cols=83 Identities=24% Similarity=0.117 Sum_probs=61.7
Q ss_pred HHcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHh
Q 041355 10 LVCSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLN 88 (180)
Q Consensus 10 ~~~~~~-~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~ 88 (180)
+.-++. .|.+++|.|.+.-+|.=...++...|++|. +|++. .+++.+.+++ .|+++-++|.+.+-. -..
T Consensus 149 ~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVt-i~hs~---T~~l~~~~~~-----ADIvV~AvGkp~~i~-~~~ 218 (281)
T PRK14183 149 EEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVD-ICHIF---TKDLKAHTKK-----ADIVIVGVGKPNLIT-EDM 218 (281)
T ss_pred HHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEE-EeCCC---CcCHHHHHhh-----CCEEEEecCcccccC-HHH
Confidence 333443 799999999999999999999998999887 44542 3445444444 799999999874422 367
Q ss_pred hccCCEEEEEeccc
Q 041355 89 MRLRGRIAVSSIIS 102 (180)
Q Consensus 89 l~~~G~~v~~~~~~ 102 (180)
++++..++.+|...
T Consensus 219 vk~gavvIDvGin~ 232 (281)
T PRK14183 219 VKEGAIVIDIGINR 232 (281)
T ss_pred cCCCcEEEEeeccc
Confidence 89999999998654
No 431
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=95.92 E-value=0.037 Score=46.13 Aligned_cols=39 Identities=15% Similarity=0.154 Sum_probs=32.6
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCCC
Q 041355 14 PKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKE 52 (180)
Q Consensus 14 ~~~g~~vlI~Ga~g~vG~~~iqlak~~-g~~vi~~~~~~~ 52 (180)
.+++.+|||+||+|-+|..+++.+... |.+|+++++...
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~ 351 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSD 351 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCch
Confidence 456789999999999999999877764 689999987654
No 432
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=95.92 E-value=0.12 Score=39.91 Aligned_cols=80 Identities=19% Similarity=0.249 Sum_probs=51.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHc--CCEEEEEe-CCCCC----------------CcchHHHHHH---------------
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLA--GCYVVGSA-GSKEK----------------EEPDLDAALK--------------- 63 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~--g~~vi~~~-~~~~~----------------~~~~~~~~~~--------------- 63 (180)
.+|.|.|++|++|...+...+.. .++|++.+ +++.. .++.....++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 47899999999999999998765 56888877 33332 1222222222
Q ss_pred ---hHcCC-CccEEEeCCChh-hHHHHHHhhccCCEEEE
Q 041355 64 ---RWFPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAV 97 (180)
Q Consensus 64 ---~~~~~-~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~ 97 (180)
+.... .+|+++.++++. .+...+..++.|-++.+
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL 120 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL 120 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence 22222 689999988765 66666777766544433
No 433
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.91 E-value=0.062 Score=38.93 Aligned_cols=89 Identities=17% Similarity=0.208 Sum_probs=60.9
Q ss_pred HHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCCCC---CcchHH------------HHHHhHcCC-Cc
Q 041355 9 ILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEK---EEPDLD------------AALKRWFPQ-GI 70 (180)
Q Consensus 9 ~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~--~vi~~~~~~~~---~~~~~~------------~~~~~~~~~-~~ 70 (180)
....++.+|++|+-.| .+.|.+..-+|++.|- +|+......+. ..+++. ..+.+...+ .+
T Consensus 87 ~~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~v 164 (256)
T COG2519 87 VARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEEDV 164 (256)
T ss_pred HHHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecccccccccccc
Confidence 3668899999999877 3468888899998875 78888877664 111111 111111122 68
Q ss_pred cEEEeCCChh--hHHHHHHhhccCCEEEEEe
Q 041355 71 DIYFENVGGK--MLDAVLLNMRLRGRIAVSS 99 (180)
Q Consensus 71 d~~~d~~g~~--~~~~~~~~l~~~G~~v~~~ 99 (180)
|.+|=-...+ .++++...|+++|+++.+.
T Consensus 165 Dav~LDmp~PW~~le~~~~~Lkpgg~~~~y~ 195 (256)
T COG2519 165 DAVFLDLPDPWNVLEHVSDALKPGGVVVVYS 195 (256)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence 8765445544 8899999999999999883
No 434
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=95.91 E-value=0.022 Score=40.58 Aligned_cols=62 Identities=26% Similarity=0.393 Sum_probs=47.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC------------------------CcchHHHHHHhHcC--CCc
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK------------------------EEPDLDAALKRWFP--QGI 70 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~------------------------~~~~~~~~~~~~~~--~~~ 70 (180)
|++++++|++|++|+.....+...|+.+.++..+.+. ...++.+..++... +.+
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~i 84 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTI 84 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCce
Confidence 8899999999999998888888889988888887775 33344445555433 468
Q ss_pred cEEEeCCC
Q 041355 71 DIYFENVG 78 (180)
Q Consensus 71 d~~~d~~g 78 (180)
|+.++-.|
T Consensus 85 DIlINgAG 92 (261)
T KOG4169|consen 85 DILINGAG 92 (261)
T ss_pred EEEEcccc
Confidence 99998776
No 435
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=95.91 E-value=0.057 Score=41.89 Aligned_cols=85 Identities=16% Similarity=0.089 Sum_probs=56.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCCCC-C-----c-----chH--HHHHHhHcCCCccEEEeCCChhhH
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEK-E-----E-----PDL--DAALKRWFPQGIDIYFENVGGKML 82 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~-g~~vi~~~~~~~~-~-----~-----~~~--~~~~~~~~~~~~d~~~d~~g~~~~ 82 (180)
..+|.|.||+|-+|..+++++..+ ..++..+.+..+. . . .+. ...+....-.++|++|-|.+.+..
T Consensus 38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~s 117 (381)
T PLN02968 38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHGTT 117 (381)
T ss_pred ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHHHH
Confidence 347999999999999999999877 5688887775433 0 0 011 000111100368999999998866
Q ss_pred HHHHHhhccCCEEEEEecc
Q 041355 83 DAVLLNMRLRGRIAVSSII 101 (180)
Q Consensus 83 ~~~~~~l~~~G~~v~~~~~ 101 (180)
......+..+-+++.++..
T Consensus 118 ~~i~~~~~~g~~VIDlSs~ 136 (381)
T PLN02968 118 QEIIKALPKDLKIVDLSAD 136 (381)
T ss_pred HHHHHHHhCCCEEEEcCch
Confidence 6666666665567776543
No 436
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.90 E-value=0.067 Score=39.62 Aligned_cols=83 Identities=17% Similarity=0.091 Sum_probs=62.2
Q ss_pred HHcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHh
Q 041355 10 LVCSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLN 88 (180)
Q Consensus 10 ~~~~~~-~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~ 88 (180)
+.-++. .|++++|.|.+..+|.=...++...|++|..+.+. ..++.+.+++ .|+++-++|...+-. -..
T Consensus 149 ~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~----T~~l~~~~~~-----ADIvI~AvG~~~~i~-~~~ 218 (284)
T PRK14170 149 KSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSR----TKDLPQVAKE-----ADILVVATGLAKFVK-KDY 218 (284)
T ss_pred HHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC----CCCHHHHHhh-----CCEEEEecCCcCccC-HHH
Confidence 333443 69999999999999999999999899988865442 3445555554 699999999774411 267
Q ss_pred hccCCEEEEEeccc
Q 041355 89 MRLRGRIAVSSIIS 102 (180)
Q Consensus 89 l~~~G~~v~~~~~~ 102 (180)
++++..++.+|...
T Consensus 219 vk~GavVIDvGin~ 232 (284)
T PRK14170 219 IKPGAIVIDVGMDR 232 (284)
T ss_pred cCCCCEEEEccCcc
Confidence 89999999998754
No 437
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.87 E-value=0.043 Score=41.54 Aligned_cols=36 Identities=6% Similarity=0.042 Sum_probs=28.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g--~~vi~~~~~~ 51 (180)
.|.+|||+||+|.+|..+++.+...| .+|++.+++.
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~ 40 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDE 40 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCCh
Confidence 36789999999999999888776665 5888877654
No 438
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.87 E-value=0.036 Score=44.46 Aligned_cols=37 Identities=19% Similarity=0.124 Sum_probs=32.8
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 13 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 13 ~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
.+.+|++|+|+| .|.+|++++++++..|++|++++..
T Consensus 8 ~~~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~ 44 (488)
T PRK03369 8 PLLPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDD 44 (488)
T ss_pred cccCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 356789999999 9999999999999999999997754
No 439
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.87 E-value=0.12 Score=37.48 Aligned_cols=34 Identities=18% Similarity=0.180 Sum_probs=27.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSK 51 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~ 51 (180)
+.+|+|.| +|++|..+++.+...|. +++.++...
T Consensus 24 ~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 36799999 99999999999999998 666666553
No 440
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.039 Score=39.04 Aligned_cols=62 Identities=18% Similarity=0.197 Sum_probs=41.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-------------CcchH--HHHHHhHcCC--CccEEEeCCCh
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-------------EEPDL--DAALKRWFPQ--GIDIYFENVGG 79 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-------------~~~~~--~~~~~~~~~~--~~d~~~d~~g~ 79 (180)
..+++|+||+|.+|...+..+... .+|++++++.+. ...|+ .+.+.+.... ++|.++.+.|.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 357999999999999887766655 889999887532 00011 1223332222 68999998874
No 441
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.87 E-value=0.08 Score=36.94 Aligned_cols=86 Identities=13% Similarity=0.044 Sum_probs=59.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC-----------CCc--chHHHHHHhHcCCCccEEEeCCChhh
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE-----------KEE--PDLDAALKRWFPQGIDIYFENVGGKM 81 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~-----------~~~--~~~~~~~~~~~~~~~d~~~d~~g~~~ 81 (180)
-.|++++|.|.+.-+|.=+..++...|++|..+..+.- +.. .+....+.+.+. ..|+++-++|...
T Consensus 60 l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~-~ADIVIsAvG~~~ 138 (197)
T cd01079 60 LYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLS-QSDVVITGVPSPN 138 (197)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccccccccccccccccccchhhHHHHHhh-hCCEEEEccCCCC
Confidence 47999999999999999999999999999997742110 011 121112222221 3799999999875
Q ss_pred HHHHHHhhccCCEEEEEecc
Q 041355 82 LDAVLLNMRLRGRIAVSSII 101 (180)
Q Consensus 82 ~~~~~~~l~~~G~~v~~~~~ 101 (180)
+.---..++++..++.+|..
T Consensus 139 ~~i~~d~ik~GavVIDVGi~ 158 (197)
T cd01079 139 YKVPTELLKDGAICINFASI 158 (197)
T ss_pred CccCHHHcCCCcEEEEcCCC
Confidence 42224678999999999864
No 442
>PRK08328 hypothetical protein; Provisional
Probab=95.86 E-value=0.18 Score=36.28 Aligned_cols=34 Identities=21% Similarity=0.226 Sum_probs=27.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSK 51 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~ 51 (180)
+.+|+|.| +|++|..+++.+-..|. ++..++...
T Consensus 27 ~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 27 KAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 46799999 99999999999999998 676665543
No 443
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=95.85 E-value=0.027 Score=39.82 Aligned_cols=85 Identities=15% Similarity=0.051 Sum_probs=56.1
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCCCC-------------------CcchHHHHHHhH---c-
Q 041355 12 CSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEK-------------------EEPDLDAALKRW---F- 66 (180)
Q Consensus 12 ~~~~~g~~vlI~Ga~g~vG~~~iqlak~~--g~~vi~~~~~~~~-------------------~~~~~~~~~~~~---~- 66 (180)
.+.....+||-.| +.+|+.++.+|+.+ +.+|+.+..+++. ...+..+.+.+. .
T Consensus 41 ~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda~~~l~~l~~~~~ 118 (205)
T PF01596_consen 41 VRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGDALEVLPELANDGE 118 (205)
T ss_dssp HHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-HHHHHHHHHHTTT
T ss_pred HHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEeccHhhHHHHHhccC
Confidence 3444567899998 56799999999876 4699999888765 112222333322 2
Q ss_pred CCCccEEE-eCCChh---hHHHHHHhhccCCEEEEE
Q 041355 67 PQGIDIYF-ENVGGK---MLDAVLLNMRLRGRIAVS 98 (180)
Q Consensus 67 ~~~~d~~~-d~~g~~---~~~~~~~~l~~~G~~v~~ 98 (180)
.+.||+|| |+.=.. .+..++++|+++|.++.=
T Consensus 119 ~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D 154 (205)
T PF01596_consen 119 EGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIAD 154 (205)
T ss_dssp TTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceeEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence 24799985 544332 567788999999988764
No 444
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.83 E-value=0.23 Score=32.44 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=26.8
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGS 50 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~ 50 (180)
..+|+|.| +|++|..++..+-..|. ++..++..
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCc
Confidence 35799999 99999998888888898 67777665
No 445
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.83 E-value=0.17 Score=37.66 Aligned_cols=77 Identities=16% Similarity=0.186 Sum_probs=59.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHhhccCCEE
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRI 95 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~ 95 (180)
.|++++|.|.+.-+|.=...++...|++|..+.+ +..++.+..++ .|+++-++|...+-. -..++++..+
T Consensus 158 ~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs----~T~~L~~~~~~-----ADIvV~AvGkp~~i~-~~~vk~GavV 227 (288)
T PRK14171 158 TGKNVVIIGRSNIVGKPLSALLLKENCSVTICHS----KTHNLSSITSK-----ADIVVAAIGSPLKLT-AEYFNPESIV 227 (288)
T ss_pred CCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCC----CCCCHHHHHhh-----CCEEEEccCCCCccC-HHHcCCCCEE
Confidence 7899999999999999999999989998875443 23445555554 799999999763221 2678999999
Q ss_pred EEEeccc
Q 041355 96 AVSSIIS 102 (180)
Q Consensus 96 v~~~~~~ 102 (180)
+.+|...
T Consensus 228 IDvGin~ 234 (288)
T PRK14171 228 IDVGINR 234 (288)
T ss_pred EEeeccc
Confidence 9998654
No 446
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=95.82 E-value=0.039 Score=39.21 Aligned_cols=91 Identities=16% Similarity=0.164 Sum_probs=56.3
Q ss_pred HHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCCCC---CcchHH-----------HHHHhH-c-CC
Q 041355 7 LIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEK---EEPDLD-----------AALKRW-F-PQ 68 (180)
Q Consensus 7 ~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~--~vi~~~~~~~~---~~~~~~-----------~~~~~~-~-~~ 68 (180)
.+.+...+++|++||-.| + +.|..+..+++..+. +|++++.+++. ..+.+. ....+. . .+
T Consensus 68 ~~~~~l~~~~~~~VLDiG-~-GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~~~ 145 (215)
T TIGR00080 68 MMTELLELKPGMKVLEIG-T-GSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPLA 145 (215)
T ss_pred HHHHHhCCCCcCEEEEEC-C-CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCcccC
Confidence 344566789999999888 3 357777888887653 69988887553 000000 000010 1 12
Q ss_pred CccEEEeCCChh-hHHHHHHhhccCCEEEEEe
Q 041355 69 GIDIYFENVGGK-MLDAVLLNMRLRGRIAVSS 99 (180)
Q Consensus 69 ~~d~~~d~~g~~-~~~~~~~~l~~~G~~v~~~ 99 (180)
.||.++-+.... ......+.|+++|+++...
T Consensus 146 ~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~~ 177 (215)
T TIGR00080 146 PYDRIYVTAAGPKIPEALIDQLKEGGILVMPV 177 (215)
T ss_pred CCCEEEEcCCcccccHHHHHhcCcCcEEEEEE
Confidence 689877544333 5566778999999988653
No 447
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=95.80 E-value=0.029 Score=42.24 Aligned_cols=37 Identities=24% Similarity=0.324 Sum_probs=32.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.|.+|+|+||+|-+|..+++.+...|.+|+++.++..
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 40 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLT 40 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 4789999999999999999888888999998887654
No 448
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.80 E-value=0.045 Score=37.37 Aligned_cols=65 Identities=22% Similarity=0.189 Sum_probs=48.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------------------CcchHHHHHHhHc--CCCccE
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------------------EEPDLDAALKRWF--PQGIDI 72 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------------------~~~~~~~~~~~~~--~~~~d~ 72 (180)
.+|-..+|+|++++.|.+....+...|+.|+..+-+.++ .++++...+.... -|..|.
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 456677999999999999999888899999888877765 2333433333322 247999
Q ss_pred EEeCCCh
Q 041355 73 YFENVGG 79 (180)
Q Consensus 73 ~~d~~g~ 79 (180)
.++|.|-
T Consensus 87 ~vncagi 93 (260)
T KOG1199|consen 87 LVNCAGI 93 (260)
T ss_pred eeeccce
Confidence 9999985
No 449
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=95.79 E-value=0.084 Score=37.69 Aligned_cols=60 Identities=15% Similarity=0.164 Sum_probs=37.3
Q ss_pred EEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCCCC--------------CcchHHHHHHhHcCCCccEEEeCCCh
Q 041355 19 YVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEK--------------EEPDLDAALKRWFPQGIDIYFENVGG 79 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~--g~~vi~~~~~~~~--------------~~~~~~~~~~~~~~~~~d~~~d~~g~ 79 (180)
+++|+||++++|...++.+... +..|+.+.+.... .+.+-...+.+.. +++|+++.+.|.
T Consensus 2 ~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~-~~id~li~~aG~ 77 (235)
T PRK09009 2 NILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDFQHDNVQWHALDVTDEAEIKQLSEQF-TQLDWLINCVGM 77 (235)
T ss_pred EEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccccccCceEEEEecCCCHHHHHHHHHhc-CCCCEEEECCcc
Confidence 6899999999999877766554 4566665554321 1111122222222 479999999874
No 450
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=95.79 E-value=0.39 Score=35.22 Aligned_cols=81 Identities=16% Similarity=0.090 Sum_probs=49.3
Q ss_pred EEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCCCCCc-------chHHHHHHhHcCCCccEEEeCCChhhHHHHHHhhc
Q 041355 19 YVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKEE-------PDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMR 90 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~-g~~vi~~~~~~~~~~-------~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~l~ 90 (180)
+|.|+|+.|-+|...++.+... +.++++++..+.... ......+.+... ++|+++||+..+.....+..+.
T Consensus 3 kV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~~~~~i~~~~dl~~ll~-~~DvVid~t~p~~~~~~~~~al 81 (257)
T PRK00048 3 KVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQGALGVAITDDLEAVLA-DADVLIDFTTPEATLENLEFAL 81 (257)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccCCCCccccCCHHHhcc-CCCEEEECCCHHHHHHHHHHHH
Confidence 5889997699999988888754 678887666554310 001112222222 5899999997664444444444
Q ss_pred cCCEEEEEec
Q 041355 91 LRGRIAVSSI 100 (180)
Q Consensus 91 ~~G~~v~~~~ 100 (180)
..|.-+.++.
T Consensus 82 ~~G~~vvigt 91 (257)
T PRK00048 82 EHGKPLVIGT 91 (257)
T ss_pred HcCCCEEEEC
Confidence 4455455664
No 451
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=95.75 E-value=0.038 Score=41.18 Aligned_cols=31 Identities=13% Similarity=0.143 Sum_probs=25.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcC--CEEEEEeC
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAG--CYVVGSAG 49 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g--~~vi~~~~ 49 (180)
+|+|+||+|.+|..+++.+...| .+|++..+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~ 33 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDK 33 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecC
Confidence 48999999999999999776665 68887764
No 452
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=95.75 E-value=0.024 Score=43.06 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=31.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
++.+|||+||+|.+|..+++.+...|.+|+++++++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~ 40 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRS 40 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeccc
Confidence 467899999999999999999999999999887653
No 453
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=95.75 E-value=0.12 Score=35.73 Aligned_cols=34 Identities=26% Similarity=0.215 Sum_probs=28.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK 53 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~ 53 (180)
+|.|.| +|.+|...++++-..|.+|...+.+++.
T Consensus 1 ~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~~~ 34 (180)
T PF02737_consen 1 KVAVIG-AGTMGRGIAALFARAGYEVTLYDRSPEA 34 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHH
T ss_pred CEEEEc-CCHHHHHHHHHHHhCCCcEEEEECChHH
Confidence 588999 7999999888888889999999998775
No 454
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.74 E-value=0.08 Score=39.27 Aligned_cols=82 Identities=15% Similarity=0.127 Sum_probs=59.9
Q ss_pred HHcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChh-hHHHHHH
Q 041355 10 LVCSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGK-MLDAVLL 87 (180)
Q Consensus 10 ~~~~~~-~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~-~~~~~~~ 87 (180)
+.-++. .|.+|+|.|.++-+|.-...++...|++|.+. ++ +.+++.+.+++ .|+++-++|.+ .+.. .
T Consensus 150 ~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~-~s---~t~~l~~~~~~-----ADIVI~avg~~~~v~~--~ 218 (284)
T PRK14179 150 REYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLT-HS---RTRNLAEVARK-----ADILVVAIGRGHFVTK--E 218 (284)
T ss_pred HHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEE-CC---CCCCHHHHHhh-----CCEEEEecCccccCCH--H
Confidence 333443 79999999988999999999999899988876 32 22334444443 79999999977 3333 3
Q ss_pred hhccCCEEEEEeccc
Q 041355 88 NMRLRGRIAVSSIIS 102 (180)
Q Consensus 88 ~l~~~G~~v~~~~~~ 102 (180)
.++++..++.+|...
T Consensus 219 ~ik~GavVIDvgin~ 233 (284)
T PRK14179 219 FVKEGAVVIDVGMNR 233 (284)
T ss_pred HccCCcEEEEeccee
Confidence 489999999987654
No 455
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=95.74 E-value=0.043 Score=41.21 Aligned_cols=35 Identities=26% Similarity=0.177 Sum_probs=31.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK 53 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~ 53 (180)
+|+|+||+|.+|..+++.+...|.+|++++++++.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 36 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSD 36 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcc
Confidence 68999999999999999888889999999987553
No 456
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=95.74 E-value=0.13 Score=37.46 Aligned_cols=87 Identities=10% Similarity=0.034 Sum_probs=57.4
Q ss_pred HHHcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCCCC-------------------CcchHHHHHHhHc-
Q 041355 9 ILVCSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEK-------------------EEPDLDAALKRWF- 66 (180)
Q Consensus 9 ~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~--g~~vi~~~~~~~~-------------------~~~~~~~~~~~~~- 66 (180)
....+...-.+||-.| +.+|+.++.+|+.+ +.+|+.+...++. ...+..+.+.+..
T Consensus 72 ~~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~a~e~L~~l~~ 149 (247)
T PLN02589 72 NMLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDQMIE 149 (247)
T ss_pred HHHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeccHHHHHHHHHh
Confidence 3334445567899888 57899999999876 4589988887654 1112233333322
Q ss_pred ----CCCccEEEeCCChh----hHHHHHHhhccCCEEEE
Q 041355 67 ----PQGIDIYFENVGGK----MLDAVLLNMRLRGRIAV 97 (180)
Q Consensus 67 ----~~~~d~~~d~~g~~----~~~~~~~~l~~~G~~v~ 97 (180)
.+.||++|--.... .++.++++|+++|.++.
T Consensus 150 ~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 150 DGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred ccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 24799986544432 56778899999998764
No 457
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=95.72 E-value=0.029 Score=42.25 Aligned_cols=37 Identities=19% Similarity=0.314 Sum_probs=31.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.|.++||+||+|.+|..+++.+...|++|+++.++..
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~ 40 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPK 40 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCc
Confidence 4789999999999999999988888999988776643
No 458
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A.
Probab=95.72 E-value=0.093 Score=34.54 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=28.1
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC
Q 041355 20 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK 53 (180)
Q Consensus 20 vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~ 53 (180)
++|+| +|.++.+.+++++.+|++|++++..++.
T Consensus 1 L~I~G-aG~va~al~~la~~lg~~v~v~d~r~e~ 33 (136)
T PF13478_consen 1 LVIFG-AGHVARALARLAALLGFRVTVVDPRPER 33 (136)
T ss_dssp EEEES--STCHHHHHHHHHHCTEEEEEEES-CCC
T ss_pred CEEEe-CcHHHHHHHHHHHhCCCEEEEEcCCccc
Confidence 46888 8999999999999999999999998764
No 459
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=95.72 E-value=0.039 Score=39.39 Aligned_cols=32 Identities=22% Similarity=0.233 Sum_probs=28.3
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 20 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 20 vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
++|+|++|.+|...++.+...|++|+.+.++.
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~ 32 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSS 32 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 58999999999999988888899999988765
No 460
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.72 E-value=0.11 Score=38.23 Aligned_cols=34 Identities=15% Similarity=0.115 Sum_probs=28.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~ 50 (180)
.+.+|+|.| .|++|..++..+-..|. ++..++..
T Consensus 29 ~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 456799999 99999999999988897 77766655
No 461
>PLN03139 formate dehydrogenase; Provisional
Probab=95.71 E-value=0.11 Score=40.36 Aligned_cols=84 Identities=19% Similarity=0.207 Sum_probs=55.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC----Ccc--hHHHHHHhHcCCCccEEEeCCCh-h-h---H-H
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----EEP--DLDAALKRWFPQGIDIYFENVGG-K-M---L-D 83 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~----~~~--~~~~~~~~~~~~~~d~~~d~~g~-~-~---~-~ 83 (180)
.|.+|.|.| .|.+|...++.++.+|.+|++.+++... ... .....+.+... ..|+++-++.. + + + .
T Consensus 198 ~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~-~sDvV~l~lPlt~~T~~li~~ 275 (386)
T PLN03139 198 EGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLP-KCDVVVINTPLTEKTRGMFNK 275 (386)
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHh-hCCEEEEeCCCCHHHHHHhCH
Confidence 578999999 9999999999999999999988776422 000 00111222221 36888777653 2 1 1 2
Q ss_pred HHHHhhccCCEEEEEecc
Q 041355 84 AVLLNMRLRGRIAVSSII 101 (180)
Q Consensus 84 ~~~~~l~~~G~~v~~~~~ 101 (180)
..+..++++..+++++-.
T Consensus 276 ~~l~~mk~ga~lIN~aRG 293 (386)
T PLN03139 276 ERIAKMKKGVLIVNNARG 293 (386)
T ss_pred HHHhhCCCCeEEEECCCC
Confidence 456778888888887643
No 462
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=95.71 E-value=0.075 Score=41.36 Aligned_cols=65 Identities=18% Similarity=0.236 Sum_probs=44.0
Q ss_pred CCCCEEEEecCC----------------chHHHHHHHHHHHcCCEEEEEeCCCCC------------CcchHHHHHHhHc
Q 041355 15 KKGEYVYVSAAS----------------GAVGQLVGQFAKLAGCYVVGSAGSKEK------------EEPDLDAALKRWF 66 (180)
Q Consensus 15 ~~g~~vlI~Ga~----------------g~vG~~~iqlak~~g~~vi~~~~~~~~------------~~~~~~~~~~~~~ 66 (180)
-.|.+++|+||+ |.+|.+..+.+...|++|+.+.++... ..++..+.+.+..
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 262 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTPPGVKSIKVSTAEEMLEAALNEL 262 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCCCCcEEEEeccHHHHHHHHHHhh
Confidence 468999999984 348999999999999999988765432 1222323233222
Q ss_pred CCCccEEEeCCCh
Q 041355 67 PQGIDIYFENVGG 79 (180)
Q Consensus 67 ~~~~d~~~d~~g~ 79 (180)
.+.+|+++.+.+-
T Consensus 263 ~~~~D~~i~~Aav 275 (390)
T TIGR00521 263 AKDFDIFISAAAV 275 (390)
T ss_pred cccCCEEEEcccc
Confidence 2468888887774
No 463
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.70 E-value=0.14 Score=36.14 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=28.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~ 50 (180)
...+|+|.| .|++|..+++.+...|. ++..++..
T Consensus 20 ~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 346799999 99999999999999998 77777765
No 464
>PRK07041 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.031 Score=39.79 Aligned_cols=31 Identities=19% Similarity=0.231 Sum_probs=27.4
Q ss_pred EEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 21 YVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 21 lI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
+|+||+|++|...++.+...|++|+.++++.
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~ 31 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSR 31 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5899999999998888888899999998863
No 465
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=95.68 E-value=0.029 Score=42.09 Aligned_cols=37 Identities=22% Similarity=0.295 Sum_probs=32.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
.+.+|||+||+|-+|..++..+...|.+|++++++..
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~ 39 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPN 39 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCC
Confidence 3578999999999999999988888999998887643
No 466
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.68 E-value=0.1 Score=37.57 Aligned_cols=33 Identities=18% Similarity=0.095 Sum_probs=26.8
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGS 50 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~ 50 (180)
..+|+|.| .|++|..++..+-..|. +++.++..
T Consensus 11 ~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 11 NAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred CCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 35699999 99999999888888898 66666654
No 467
>PLN00015 protochlorophyllide reductase
Probab=95.68 E-value=0.028 Score=42.14 Aligned_cols=32 Identities=19% Similarity=0.138 Sum_probs=27.1
Q ss_pred EEecCCchHHHHHHHHHHHcC-CEEEEEeCCCC
Q 041355 21 YVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKE 52 (180)
Q Consensus 21 lI~Ga~g~vG~~~iqlak~~g-~~vi~~~~~~~ 52 (180)
+|+||++++|..+++.+...| ++|+.++++.+
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~ 33 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFL 33 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 589999999999888887789 89999887643
No 468
>PRK14030 glutamate dehydrogenase; Provisional
Probab=95.68 E-value=0.43 Score=37.82 Aligned_cols=37 Identities=30% Similarity=0.243 Sum_probs=33.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK 53 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~ 53 (180)
.|.+|+|.| .|-||+.+++.+..+|++|+++..+...
T Consensus 227 ~g~~vaIQG-fGnVG~~aA~~L~e~GakvVavSD~~G~ 263 (445)
T PRK14030 227 KGKTVAISG-FGNVAWGAATKATELGAKVVTISGPDGY 263 (445)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcCCce
Confidence 688999999 9999999999999999999998777654
No 469
>PRK08317 hypothetical protein; Provisional
Probab=95.66 E-value=0.099 Score=37.31 Aligned_cols=89 Identities=18% Similarity=0.219 Sum_probs=57.8
Q ss_pred HHHcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCCCC------C----c--chHH-HHHHh--HcCCCcc
Q 041355 9 ILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEK------E----E--PDLD-AALKR--WFPQGID 71 (180)
Q Consensus 9 ~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g--~~vi~~~~~~~~------~----~--~~~~-~~~~~--~~~~~~d 71 (180)
.+...+.++++||-.| +|. |..+..+++..+ .++++++.++.. . . ..+. ..+.. ...+.||
T Consensus 12 ~~~~~~~~~~~vLdiG-~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 89 (241)
T PRK08317 12 FELLAVQPGDRVLDVG-CGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFD 89 (241)
T ss_pred HHHcCCCCCCEEEEeC-CCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCce
Confidence 3566788999999999 554 888899998773 589999887553 0 0 0000 00111 1123688
Q ss_pred EEEeCC-----Ch--hhHHHHHHhhccCCEEEEEe
Q 041355 72 IYFENV-----GG--KMLDAVLLNMRLRGRIAVSS 99 (180)
Q Consensus 72 ~~~d~~-----g~--~~~~~~~~~l~~~G~~v~~~ 99 (180)
+++-.. .. ..+..+.++|+++|.++...
T Consensus 90 ~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 90 AVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred EEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 876532 22 26778889999999998765
No 470
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=95.65 E-value=0.049 Score=41.60 Aligned_cols=30 Identities=10% Similarity=0.176 Sum_probs=25.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEE
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGS 47 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~ 47 (180)
.+|||+||+|.+|..+++.+...|.+++++
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~ 31 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVV 31 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEE
Confidence 369999999999999999999889864443
No 471
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=95.65 E-value=0.3 Score=34.68 Aligned_cols=86 Identities=19% Similarity=0.105 Sum_probs=57.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHH-----HHHHhHcC----CCccEEEeCCChhhHHHHH
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLD-----AALKRWFP----QGIDIYFENVGGKMLDAVL 86 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~-----~~~~~~~~----~~~d~~~d~~g~~~~~~~~ 86 (180)
.|.+|+|.| +|.+|.-=+.++-..|++|+++...-...-..+. ..+.+... .+++++|-|++++.++..+
T Consensus 11 ~~k~VlvvG-gG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d~~ln~~i 89 (210)
T COG1648 11 EGKKVLVVG-GGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDDEELNERI 89 (210)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCCHHHHHHH
Confidence 578899999 8999999899999999999888776522000010 11111111 1488999999988766554
Q ss_pred -HhhccCCEEEEEeccc
Q 041355 87 -LNMRLRGRIAVSSIIS 102 (180)
Q Consensus 87 -~~l~~~G~~v~~~~~~ 102 (180)
..+...+.++++....
T Consensus 90 ~~~a~~~~i~vNv~D~p 106 (210)
T COG1648 90 AKAARERRILVNVVDDP 106 (210)
T ss_pred HHHHHHhCCceeccCCc
Confidence 5667778888875543
No 472
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=95.64 E-value=0.097 Score=39.71 Aligned_cols=80 Identities=16% Similarity=0.088 Sum_probs=53.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCCCCC--------cchHHHHHHhHcCCCccEEEeCCC-hh-h---
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAK-LAGCYVVGSAGSKEKE--------EPDLDAALKRWFPQGIDIYFENVG-GK-M--- 81 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak-~~g~~vi~~~~~~~~~--------~~~~~~~~~~~~~~~~d~~~d~~g-~~-~--- 81 (180)
.|.++.|.| .|.+|....+.++ .+|.+|++.++..... ..++.+-+. ..|++.-++. ++ +
T Consensus 144 ~gktvGIiG-~G~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell~-----~sDvv~lh~plt~~T~~l 217 (323)
T PRK15409 144 HHKTLGIVG-MGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQ-----ESDFVCIILPLTDETHHL 217 (323)
T ss_pred CCCEEEEEc-ccHHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHHH-----hCCEEEEeCCCChHHhhc
Confidence 578999999 9999999999998 8999999877653210 011222222 3678766654 22 1
Q ss_pred H-HHHHHhhccCCEEEEEecc
Q 041355 82 L-DAVLLNMRLRGRIAVSSII 101 (180)
Q Consensus 82 ~-~~~~~~l~~~G~~v~~~~~ 101 (180)
+ ...+..++++..+++++-.
T Consensus 218 i~~~~l~~mk~ga~lIN~aRG 238 (323)
T PRK15409 218 FGAEQFAKMKSSAIFINAGRG 238 (323)
T ss_pred cCHHHHhcCCCCeEEEECCCc
Confidence 1 3456788888888887643
No 473
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=95.63 E-value=0.1 Score=40.94 Aligned_cols=78 Identities=17% Similarity=0.122 Sum_probs=53.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCC------cchHHHHHHhHcCCCccEEEeCCC-hh-h---H-H
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKE------EPDLDAALKRWFPQGIDIYFENVG-GK-M---L-D 83 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~------~~~~~~~~~~~~~~~~d~~~d~~g-~~-~---~-~ 83 (180)
.|.++.|.| .|.+|...++.++.+|.+|++.++..... ..++.+-+. ..|++.-++. .+ + + .
T Consensus 150 ~gktvGIiG-~G~IG~~vA~~~~~fGm~V~~~d~~~~~~~~~~~~~~~l~ell~-----~sDiVslh~Plt~~T~~li~~ 223 (409)
T PRK11790 150 RGKTLGIVG-YGHIGTQLSVLAESLGMRVYFYDIEDKLPLGNARQVGSLEELLA-----QSDVVSLHVPETPSTKNMIGA 223 (409)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCcccccCCceecCCHHHHHh-----hCCEEEEcCCCChHHhhccCH
Confidence 578999999 99999999999999999999988764321 012222222 2577766554 22 1 1 3
Q ss_pred HHHHhhccCCEEEEEe
Q 041355 84 AVLLNMRLRGRIAVSS 99 (180)
Q Consensus 84 ~~~~~l~~~G~~v~~~ 99 (180)
..+..++++..+++++
T Consensus 224 ~~l~~mk~ga~lIN~a 239 (409)
T PRK11790 224 EELALMKPGAILINAS 239 (409)
T ss_pred HHHhcCCCCeEEEECC
Confidence 3556778887777776
No 474
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.63 E-value=0.072 Score=38.73 Aligned_cols=34 Identities=18% Similarity=0.135 Sum_probs=28.9
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeC
Q 041355 16 KGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAG 49 (180)
Q Consensus 16 ~g~~vlI~Ga~--g~vG~~~iqlak~~g~~vi~~~~ 49 (180)
+|.+++|+||+ +++|...++.+...|++|+.+++
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~ 40 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYW 40 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEec
Confidence 57899999987 48999988888889999888753
No 475
>PRK07574 formate dehydrogenase; Provisional
Probab=95.63 E-value=0.12 Score=40.14 Aligned_cols=84 Identities=13% Similarity=0.048 Sum_probs=55.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC----Ccch--HHHHHHhHcCCCccEEEeCCCh-h-h---H-H
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----EEPD--LDAALKRWFPQGIDIYFENVGG-K-M---L-D 83 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~----~~~~--~~~~~~~~~~~~~d~~~d~~g~-~-~---~-~ 83 (180)
.|.+|.|+| .|.+|....+.++.+|.+|++.++.... .... ....+.+.. ...|+++-++.. + + + .
T Consensus 191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell-~~aDvV~l~lPlt~~T~~li~~ 268 (385)
T PRK07574 191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLV-SVCDVVTIHCPLHPETEHLFDA 268 (385)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHh-hcCCEEEEcCCCCHHHHHHhCH
Confidence 567899999 9999999999999999999999886522 0000 001122221 146888877763 2 1 2 2
Q ss_pred HHHHhhccCCEEEEEecc
Q 041355 84 AVLLNMRLRGRIAVSSII 101 (180)
Q Consensus 84 ~~~~~l~~~G~~v~~~~~ 101 (180)
..+..++++..+++++-.
T Consensus 269 ~~l~~mk~ga~lIN~aRG 286 (385)
T PRK07574 269 DVLSRMKRGSYLVNTARG 286 (385)
T ss_pred HHHhcCCCCcEEEECCCC
Confidence 456678888888877543
No 476
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.63 E-value=0.11 Score=38.49 Aligned_cols=77 Identities=18% Similarity=0.087 Sum_probs=59.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHhhccCCEE
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRI 95 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~ 95 (180)
.|.+++|.|.+.-+|.=+..++...|+.|..+.+. ..++.+..++ .|+++-++|.+.+-. -..++++..+
T Consensus 156 ~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~----T~nl~~~~~~-----ADIvIsAvGkp~~i~-~~~vk~GavV 225 (282)
T PRK14166 156 EGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK----TKDLSLYTRQ-----ADLIIVAAGCVNLLR-SDMVKEGVIV 225 (282)
T ss_pred CCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC----CCCHHHHHhh-----CCEEEEcCCCcCccC-HHHcCCCCEE
Confidence 79999999999999999999998889988855542 3345444444 799999999874422 2578999999
Q ss_pred EEEeccc
Q 041355 96 AVSSIIS 102 (180)
Q Consensus 96 v~~~~~~ 102 (180)
+.+|...
T Consensus 226 IDvGin~ 232 (282)
T PRK14166 226 VDVGINR 232 (282)
T ss_pred EEecccc
Confidence 9998654
No 477
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=95.62 E-value=0.23 Score=37.13 Aligned_cols=77 Identities=19% Similarity=0.159 Sum_probs=59.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHhhccCCEE
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRI 95 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~ 95 (180)
.|.+++|.|.+.-+|.=+..++...|++|..+.+. ..++.+.+++ .|+++-++|...+-. -..++++..+
T Consensus 166 ~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~----T~nl~~~~~~-----ADIvv~AvGk~~~i~-~~~vk~gavV 235 (299)
T PLN02516 166 KGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSR----TPDPESIVRE-----ADIVIAAAGQAMMIK-GDWIKPGAAV 235 (299)
T ss_pred CCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC----CCCHHHHHhh-----CCEEEEcCCCcCccC-HHHcCCCCEE
Confidence 69999999999999999999999899988866542 3344444444 699999999763211 2678999999
Q ss_pred EEEeccc
Q 041355 96 AVSSIIS 102 (180)
Q Consensus 96 v~~~~~~ 102 (180)
+.+|...
T Consensus 236 IDvGin~ 242 (299)
T PLN02516 236 IDVGTNA 242 (299)
T ss_pred EEeeccc
Confidence 9998754
No 478
>PRK06924 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.032 Score=40.26 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=30.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
++++|+||+|++|...++.+...|++|+.+++++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCc
Confidence 4789999999999998888888899999998876
No 479
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.59 E-value=0.098 Score=36.59 Aligned_cols=92 Identities=11% Similarity=0.049 Sum_probs=54.8
Q ss_pred HHHHHHHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC--------Ccc--hHH---HHHHh-HcCCCc
Q 041355 5 GNLIILVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--------EEP--DLD---AALKR-WFPQGI 70 (180)
Q Consensus 5 ~~~l~~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~--------~~~--~~~---~~~~~-~~~~~~ 70 (180)
...+.+.....++.+||-.|+ +.|..++.+++ .|.+|++++.++.. ... ... ..+.. ...+.+
T Consensus 19 ~~~l~~~~~~~~~~~vLDiGc--G~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~f 95 (195)
T TIGR00477 19 HSAVREAVKTVAPCKTLDLGC--GQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLPLRTDAYDINAAALNEDY 95 (195)
T ss_pred hHHHHHHhccCCCCcEEEeCC--CCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCCceeEeccchhccccCCC
Confidence 344555556566678888883 45777777776 47899999987653 000 000 00111 112368
Q ss_pred cEEEeCC-----Ch----hhHHHHHHhhccCCEEEEEe
Q 041355 71 DIYFENV-----GG----KMLDAVLLNMRLRGRIAVSS 99 (180)
Q Consensus 71 d~~~d~~-----g~----~~~~~~~~~l~~~G~~v~~~ 99 (180)
|+++.+. .. ..+..+.+.|+|+|.++.+.
T Consensus 96 D~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~ 133 (195)
T TIGR00477 96 DFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVA 133 (195)
T ss_pred CEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 9887642 11 14566778899999965553
No 480
>PLN02778 3,5-epimerase/4-reductase
Probab=95.59 E-value=0.096 Score=39.18 Aligned_cols=59 Identities=19% Similarity=0.277 Sum_probs=40.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVG 78 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g 78 (180)
...+|||+||+|-+|..+++.+...|.+|+.....-. +...+...+.. .++|++|.|++
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~-~~~~v~~~l~~---~~~D~ViH~Aa 66 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLE-NRASLEADIDA---VKPTHVFNAAG 66 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccC-CHHHHHHHHHh---cCCCEEEECCc
Confidence 3468999999999999999999989998865322111 21222222222 26899998876
No 481
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.58 E-value=0.11 Score=38.68 Aligned_cols=78 Identities=19% Similarity=0.137 Sum_probs=60.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHhhccCCE
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGR 94 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~ 94 (180)
-.|.+++|.|.+.-+|.=...++...|++|..+.+. ..++.+.+++ .|+++-++|.+.+-. -..++++..
T Consensus 158 l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~----T~~l~~~~~~-----ADIvVsAvGkp~~i~-~~~ik~gai 227 (294)
T PRK14187 158 LSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSA----TRDLADYCSK-----ADILVAAVGIPNFVK-YSWIKKGAI 227 (294)
T ss_pred CCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCC----CCCHHHHHhh-----CCEEEEccCCcCccC-HHHcCCCCE
Confidence 369999999999999999999999999998865552 3345444544 799999999874421 257889999
Q ss_pred EEEEeccc
Q 041355 95 IAVSSIIS 102 (180)
Q Consensus 95 ~v~~~~~~ 102 (180)
++.+|...
T Consensus 228 VIDVGin~ 235 (294)
T PRK14187 228 VIDVGINS 235 (294)
T ss_pred EEEecccc
Confidence 99998754
No 482
>PRK08655 prephenate dehydrogenase; Provisional
Probab=95.56 E-value=0.11 Score=41.13 Aligned_cols=80 Identities=14% Similarity=0.164 Sum_probs=51.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHH--------HHhHcCCCccEEEeCCChhhHH----HHH
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAA--------LKRWFPQGIDIYFENVGGKMLD----AVL 86 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~--------~~~~~~~~~d~~~d~~g~~~~~----~~~ 86 (180)
+|.|.||.|.+|..++..++..|.+|++.+++++.. ...... ..+. -...|+++-|+..+... .+.
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~-~~~a~~~gv~~~~~~~e~-~~~aDvVIlavp~~~~~~vl~~l~ 79 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKG-KEVAKELGVEYANDNIDA-AKDADIVIISVPINVTEDVIKEVA 79 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHH-HHHHHHcCCeeccCHHHH-hccCCEEEEecCHHHHHHHHHHHH
Confidence 588999889999999999999999998888765430 011110 1111 12578888888755333 333
Q ss_pred HhhccCCEEEEEec
Q 041355 87 LNMRLRGRIAVSSI 100 (180)
Q Consensus 87 ~~l~~~G~~v~~~~ 100 (180)
..++++..++.+++
T Consensus 80 ~~l~~~~iViDvsS 93 (437)
T PRK08655 80 PHVKEGSLLMDVTS 93 (437)
T ss_pred hhCCCCCEEEEccc
Confidence 44556666676665
No 483
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=95.53 E-value=0.15 Score=39.53 Aligned_cols=79 Identities=13% Similarity=0.116 Sum_probs=51.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC-Cc----chHHHHHHhHcCCCccEEEeCCC-hh-----h---
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-EE----PDLDAALKRWFPQGIDIYFENVG-GK-----M--- 81 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~-~~----~~~~~~~~~~~~~~~d~~~d~~g-~~-----~--- 81 (180)
.|.+|.|.| .|.+|....+.++.+|.+|++.++.... .. .++.+-+. ..|++.-++. .+ +
T Consensus 115 ~gktvGIIG-~G~IG~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~-----~sDiI~lh~PLt~~g~~~T~~l 188 (378)
T PRK15438 115 HDRTVGIVG-VGNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQ-----EADILTFHTPLFKDGPYKTLHL 188 (378)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHh-----hCCEEEEeCCCCCCcccccccc
Confidence 688999999 9999999999999999999998764322 11 11222222 2466654332 11 1
Q ss_pred H-HHHHHhhccCCEEEEEec
Q 041355 82 L-DAVLLNMRLRGRIAVSSI 100 (180)
Q Consensus 82 ~-~~~~~~l~~~G~~v~~~~ 100 (180)
+ ...+..++++..+++++-
T Consensus 189 i~~~~l~~mk~gailIN~aR 208 (378)
T PRK15438 189 ADEKLIRSLKPGAILINACR 208 (378)
T ss_pred cCHHHHhcCCCCcEEEECCC
Confidence 1 345567777777777654
No 484
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=95.52 E-value=0.061 Score=42.55 Aligned_cols=35 Identities=20% Similarity=0.063 Sum_probs=31.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
+..+|+|+||+|-+|..+++.+...|.+|+++++.
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~ 153 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNF 153 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45689999999999999999998899999998865
No 485
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.51 E-value=0.082 Score=39.94 Aligned_cols=76 Identities=26% Similarity=0.265 Sum_probs=47.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC-----EEEEEeCCCCCCcchHH-------HHHHhHcC-CCccEEEeCCChhhHHH
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGC-----YVVGSAGSKEKEEPDLD-------AALKRWFP-QGIDIYFENVGGKMLDA 84 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~-----~vi~~~~~~~~~~~~~~-------~~~~~~~~-~~~d~~~d~~g~~~~~~ 84 (180)
-+|.|.||+|.||+..++++.-... .+++..++..+.-.++. +.+.+... .++|++|-|.|++....
T Consensus 2 ~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~~v~~~~~~~~~~~~~Divf~~ag~~~s~~ 81 (334)
T COG0136 2 LNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSIGVPEDAADEFVFSDVDIVFFAAGGSVSKE 81 (334)
T ss_pred cEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccccCccccccccccccCCEEEEeCchHHHHH
Confidence 4688999999999999999976432 23444444333101111 11111111 27999999999886666
Q ss_pred HHHhhccCC
Q 041355 85 VLLNMRLRG 93 (180)
Q Consensus 85 ~~~~l~~~G 93 (180)
....++..|
T Consensus 82 ~~p~~~~~G 90 (334)
T COG0136 82 VEPKAAEAG 90 (334)
T ss_pred HHHHHHHcC
Confidence 666666555
No 486
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.51 E-value=0.24 Score=36.79 Aligned_cols=83 Identities=18% Similarity=0.125 Sum_probs=61.1
Q ss_pred HHcCCC-CCCEEEEecCCchHHHHHHHHHHH--cCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHH
Q 041355 10 LVCSPK-KGEYVYVSAASGAVGQLVGQFAKL--AGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVL 86 (180)
Q Consensus 10 ~~~~~~-~g~~vlI~Ga~g~vG~~~iqlak~--~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~ 86 (180)
+.-+++ .|.+++|.|.+..+|.=+..++.. .+++|.++.+ +..++.+.+++ .|+++-++|.+.+-. -
T Consensus 150 ~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs----~T~~l~~~~k~-----ADIvV~AvGkp~~i~-~ 219 (284)
T PRK14193 150 RRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHT----GTRDLAAHTRR-----ADIIVAAAGVAHLVT-A 219 (284)
T ss_pred HHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCC----CCCCHHHHHHh-----CCEEEEecCCcCccC-H
Confidence 334444 699999999999999998888876 6888765543 23455555555 699999999874311 3
Q ss_pred HhhccCCEEEEEeccc
Q 041355 87 LNMRLRGRIAVSSIIS 102 (180)
Q Consensus 87 ~~l~~~G~~v~~~~~~ 102 (180)
..++++..++.+|...
T Consensus 220 ~~ik~GavVIDvGin~ 235 (284)
T PRK14193 220 DMVKPGAAVLDVGVSR 235 (284)
T ss_pred HHcCCCCEEEEccccc
Confidence 6789999999998754
No 487
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=95.50 E-value=0.1 Score=39.67 Aligned_cols=77 Identities=14% Similarity=0.061 Sum_probs=59.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHHhHcCCCccEEEeCCChhhHHHHHHhhccCCEE
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALKRWFPQGIDIYFENVGGKMLDAVLLNMRLRGRI 95 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~g~~~~~~~~~~l~~~G~~ 95 (180)
.|++++|.|-+.-||.=+..++...|++|..+.+. ..++.+..++ .|+++-++|.+.+-. -..++++..+
T Consensus 213 ~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~----T~nl~~~~~~-----ADIvIsAvGkp~~v~-~d~vk~GavV 282 (345)
T PLN02897 213 AGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAF----TKDPEQITRK-----ADIVIAAAGIPNLVR-GSWLKPGAVV 282 (345)
T ss_pred CCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCC----CCCHHHHHhh-----CCEEEEccCCcCccC-HHHcCCCCEE
Confidence 69999999999999999999999899988755442 3344444444 799999999874421 3678999999
Q ss_pred EEEeccc
Q 041355 96 AVSSIIS 102 (180)
Q Consensus 96 v~~~~~~ 102 (180)
+.+|...
T Consensus 283 IDVGin~ 289 (345)
T PLN02897 283 IDVGTTP 289 (345)
T ss_pred EEccccc
Confidence 9998754
No 488
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=95.50 E-value=0.081 Score=37.88 Aligned_cols=58 Identities=22% Similarity=0.224 Sum_probs=42.3
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC---------------CcchHHHHHHhHcCCCccEEEeCCC
Q 041355 20 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---------------EEPDLDAALKRWFPQGIDIYFENVG 78 (180)
Q Consensus 20 vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~---------------~~~~~~~~~~~~~~~~~d~~~d~~g 78 (180)
|+|+||+|.+|...++.+...+.+|.+.+|+... .+.+-.+.+.+... ++|.+|-+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHc-CCceEEeecC
Confidence 7899999999999999998888899999998643 11111233333333 6888988887
No 489
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=95.49 E-value=0.056 Score=40.46 Aligned_cols=31 Identities=19% Similarity=0.164 Sum_probs=27.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeC
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAG 49 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~ 49 (180)
+|+|+||+|.+|..+++.+...|.+|+++++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~ 31 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDN 31 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeC
Confidence 4899999999999999988888999887754
No 490
>PRK08223 hypothetical protein; Validated
Probab=95.49 E-value=0.23 Score=36.96 Aligned_cols=33 Identities=15% Similarity=0.017 Sum_probs=27.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 041355 17 GEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGS 50 (180)
Q Consensus 17 g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~ 50 (180)
..+|+|.| +|++|..+++.+-..|. ++..++..
T Consensus 27 ~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 27 NSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred cCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 45799999 99999999999999999 66666555
No 491
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=95.48 E-value=0.081 Score=40.03 Aligned_cols=32 Identities=25% Similarity=0.122 Sum_probs=27.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 50 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~ 50 (180)
+|+|+||+|.+|...++.+...|.+|+++++.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~ 33 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNL 33 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecC
Confidence 58999999999999888887789999887643
No 492
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=95.46 E-value=0.089 Score=36.29 Aligned_cols=76 Identities=16% Similarity=0.185 Sum_probs=46.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCC-C-CcchHHHHHHhHcCCCccEE-EeCCChhhHHHHHHhhcc-CC
Q 041355 19 YVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKE-K-EEPDLDAALKRWFPQGIDIY-FENVGGKMLDAVLLNMRL-RG 93 (180)
Q Consensus 19 ~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~-~-~~~~~~~~~~~~~~~~~d~~-~d~~g~~~~~~~~~~l~~-~G 93 (180)
+++|+||.|++|+..++.+...+. +++.+.++.. . ...+..+.++.. +..+.+. .|....+.+..++..+.. .|
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~-g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA-GARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT-T-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC-CCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 579999999999998888877766 8998888832 2 333344444442 1234443 555555577777766543 34
Q ss_pred EE
Q 041355 94 RI 95 (180)
Q Consensus 94 ~~ 95 (180)
++
T Consensus 81 ~i 82 (181)
T PF08659_consen 81 PI 82 (181)
T ss_dssp -E
T ss_pred Cc
Confidence 44
No 493
>PLN02366 spermidine synthase
Probab=95.43 E-value=0.12 Score=38.86 Aligned_cols=83 Identities=14% Similarity=0.123 Sum_probs=50.8
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCCCC---------------Cc-------chHHHHHHhHcCCCcc
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK---------------EE-------PDLDAALKRWFPQGID 71 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~-~vi~~~~~~~~---------------~~-------~~~~~~~~~~~~~~~d 71 (180)
.+.++|||.|+.+ |.++..++++-+. +|.++.-++.- ++ .|....+++..++.+|
T Consensus 90 ~~pkrVLiIGgG~--G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD 167 (308)
T PLN02366 90 PNPKKVLVVGGGD--GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD 167 (308)
T ss_pred CCCCeEEEEcCCc--cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence 5678899999433 6677788888665 67776655431 01 1222233332234799
Q ss_pred EEEeCCCh-----------hhHHHHHHhhccCCEEEEEe
Q 041355 72 IYFENVGG-----------KMLDAVLLNMRLRGRIAVSS 99 (180)
Q Consensus 72 ~~~d~~g~-----------~~~~~~~~~l~~~G~~v~~~ 99 (180)
+|+--... +.+..+.+.|+|+|.++.-+
T Consensus 168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 168 AIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 87542221 13567788999999997643
No 494
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.42 E-value=0.028 Score=38.49 Aligned_cols=38 Identities=24% Similarity=0.303 Sum_probs=34.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK 53 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~ 53 (180)
.|..|+++|+.-++|...++-+...|++|++++|.++.
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~ 43 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEAN 43 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHH
Confidence 57889999999999999999999999999999998765
No 495
>PRK10637 cysG siroheme synthase; Provisional
Probab=95.41 E-value=0.47 Score=37.88 Aligned_cols=82 Identities=10% Similarity=0.010 Sum_probs=53.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHH--------H-hHcC---CCccEEEeCCChhhHH
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAAL--------K-RWFP---QGIDIYFENVGGKMLD 83 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~--------~-~~~~---~~~d~~~d~~g~~~~~ 83 (180)
.|.+|||.| .|.++.-=++.+...|++|.++...-. +++.+.. + ++.. .+++++|-|++++.++
T Consensus 11 ~~~~vlvvG-gG~vA~rk~~~ll~~ga~v~visp~~~---~~~~~l~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~~n 86 (457)
T PRK10637 11 RDRDCLLVG-GGDVAERKARLLLDAGARLTVNALAFI---PQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDAVN 86 (457)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCCC---HHHHHHHhCCCEEEEeCCCChHHhCCCEEEEECCCCHHHh
Confidence 578899999 788988877777778998887765321 1111100 0 0111 2688999999988666
Q ss_pred HHH-HhhccCCEEEEEecc
Q 041355 84 AVL-LNMRLRGRIAVSSII 101 (180)
Q Consensus 84 ~~~-~~l~~~G~~v~~~~~ 101 (180)
.-+ ...+..|.++++...
T Consensus 87 ~~i~~~a~~~~~lvN~~d~ 105 (457)
T PRK10637 87 QRVSEAAEARRIFCNVVDA 105 (457)
T ss_pred HHHHHHHHHcCcEEEECCC
Confidence 555 455677888887553
No 496
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.40 E-value=0.3 Score=36.51 Aligned_cols=42 Identities=19% Similarity=0.102 Sum_probs=32.2
Q ss_pred HHcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCC
Q 041355 10 LVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 52 (180)
Q Consensus 10 ~~~~~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~ 52 (180)
+.+.+++|.+|+- +-+|.+|.....+++.+|++++.+.....
T Consensus 55 ~~G~l~pG~tIVE-~TSGNTGI~LA~vaa~~Gy~~iivmP~~~ 96 (300)
T COG0031 55 KRGLLKPGGTIVE-ATSGNTGIALAMVAAAKGYRLIIVMPETM 96 (300)
T ss_pred HcCCCCCCCEEEE-cCCChHHHHHHHHHHHcCCcEEEEeCCCC
Confidence 3455899996644 55888999999999999998777776544
No 497
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=95.39 E-value=0.34 Score=32.82 Aligned_cols=77 Identities=16% Similarity=0.217 Sum_probs=49.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCC----------CcchHHHHHHhHcCCCccEEEeCCChhh----
Q 041355 16 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----------EEPDLDAALKRWFPQGIDIYFENVGGKM---- 81 (180)
Q Consensus 16 ~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~----------~~~~~~~~~~~~~~~~~d~~~d~~g~~~---- 81 (180)
.+++|.|.| .|+.|.+-.+-+|-.|.+|++..++.+. ...++.+.+++ .|+++-.+..+.
T Consensus 3 ~~k~IAViG-yGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eAv~~-----aDvV~~L~PD~~q~~v 76 (165)
T PF07991_consen 3 KGKTIAVIG-YGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEAVKK-----ADVVMLLLPDEVQPEV 76 (165)
T ss_dssp CTSEEEEES--SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHHHHC------SEEEE-S-HHHHHHH
T ss_pred CCCEEEEEC-CChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHHHhh-----CCEEEEeCChHHHHHH
Confidence 478999999 8999999999999999999998888763 22233344443 689988887653
Q ss_pred H-HHHHHhhccCCEEEEE
Q 041355 82 L-DAVLLNMRLRGRIAVS 98 (180)
Q Consensus 82 ~-~~~~~~l~~~G~~v~~ 98 (180)
+ +.+...|+++-.+++.
T Consensus 77 y~~~I~p~l~~G~~L~fa 94 (165)
T PF07991_consen 77 YEEEIAPNLKPGATLVFA 94 (165)
T ss_dssp HHHHHHHHS-TT-EEEES
T ss_pred HHHHHHhhCCCCCEEEeC
Confidence 2 4444677777666543
No 498
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=95.39 E-value=0.04 Score=41.91 Aligned_cols=34 Identities=18% Similarity=0.282 Sum_probs=30.6
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 18 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 18 ~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
++|||+||+|-+|..+++.+...|.+|++++++.
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~ 34 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRS 34 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCC
Confidence 3799999999999999999988999999988764
No 499
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.37 E-value=0.059 Score=39.75 Aligned_cols=85 Identities=13% Similarity=0.147 Sum_probs=52.5
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCCCCCcchHHHHHH-----------hHcCCCccEEEeCCChhh-
Q 041355 14 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKEEPDLDAALK-----------RWFPQGIDIYFENVGGKM- 81 (180)
Q Consensus 14 ~~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~~~~~~~~~~~~~-----------~~~~~~~d~~~d~~g~~~- 81 (180)
...+.+++|.| +|++|.+++..+...|++|+++.++.++ .+++.+.+. +.....+|++++|++...
T Consensus 114 ~~~~k~vliiG-aGg~g~aia~~L~~~g~~v~v~~R~~~~-~~~la~~~~~~~~~~~~~~~~~~~~~~DivInatp~gm~ 191 (270)
T TIGR00507 114 LRPNQRVLIIG-AGGAARAVALPLLKADCNVIIANRTVSK-AEELAERFQRYGEIQAFSMDELPLHRVDLIINATSAGMS 191 (270)
T ss_pred CccCCEEEEEc-CcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHhhcCceEEechhhhcccCccEEEECCCCCCC
Confidence 34578899999 5899999888887889888888776543 112222211 111126899999987531
Q ss_pred --HH---HHHHhhccCCEEEEEec
Q 041355 82 --LD---AVLLNMRLRGRIAVSSI 100 (180)
Q Consensus 82 --~~---~~~~~l~~~G~~v~~~~ 100 (180)
.. .....++++..++.+..
T Consensus 192 ~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 192 GNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred CCCCCCCCCHHHcCCCCEEEEecc
Confidence 11 11244666666666643
No 500
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=95.37 E-value=0.041 Score=42.09 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=32.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCC
Q 041355 15 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 51 (180)
Q Consensus 15 ~~g~~vlI~Ga~g~vG~~~iqlak~~g~~vi~~~~~~ 51 (180)
..+.+|||+||+|.+|..+++.+...|.+|+++.++.
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~ 44 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDP 44 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4677899999999999999998888899999887754
Done!