BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041358
(226 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 49/143 (34%), Gaps = 29/143 (20%)
Query: 69 TKASVKVLEYNTAVE--IVFQGTDLLA-GTDHPMHLHXXXXXXXXXXXXNFDRAKDAKRF 125
T+ +V LE A E +V+ DL G HP+HLH F+ + +F
Sbjct: 432 TEYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKF 491
Query: 126 NFVEPSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVH 185
N V P ++ +P N FK +W +H
Sbjct: 492 NLVNPPRRDVAALPGNGYLAIAFK--------------------------LDNPGSWLLH 525
Query: 186 CHLDHHQSWAMQMAFIVKNDRCA 208
CH+ H S M M F+ A
Sbjct: 526 CHIAWHASEGMAMQFVESQSSIA 548
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 50/137 (36%), Gaps = 33/137 (24%)
Query: 70 KASVKVLEYNTAVEIVFQGTDLLAGTDHPMHLHXXXXXXXXXXXXNFDRAKDAKRFNFVE 129
SV L N+++EI F T G HP HLH R+ + +N+ +
Sbjct: 367 SGSVYSLPSNSSIEITFPATTAAPGAPHPFHLHGHVFAVV--------RSAGSTSYNYDD 418
Query: 130 PSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCHLD 189
P ++ + T QA ++ + WF+HCH+D
Sbjct: 419 PVWRDVVS----------------TGTPQAGDNVTIRFQ-------TDNPGPWFLHCHID 455
Query: 190 HH--QSWAMQMAFIVKN 204
H +A+ MA + N
Sbjct: 456 FHLDAGFAVVMAEDIPN 472
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 49/152 (32%), Gaps = 35/152 (23%)
Query: 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHXXXXXXXXXXXXNFDRAKDAKRFNFVEPSL 132
V L + +EI F T AG HP HLH R+ + +N+ +P
Sbjct: 371 VYSLPSDANIEISFPATSAAAGGPHPFHLHGHAFAVV--------RSAGSTTYNYNDPIF 422
Query: 133 QNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCHLDHHQ 192
++T+ ++ I + WF+HCH+D H
Sbjct: 423 RDTV------------STGTPAANDNVTIRFK-----------TNNPGPWFLHCHIDFHL 459
Query: 193 SWAMQMAFIVKNDRCAKAKMLP----PLCELY 220
+ F A A P LC +Y
Sbjct: 460 EAGFAVVFAQDIPDVASANPTPNAWSDLCPVY 491
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 49/143 (34%), Gaps = 29/143 (20%)
Query: 69 TKASVKVLEYNTAVE--IVFQGTDLLA-GTDHPMHLHXXXXXXXXXXXXNFDRAKDAKRF 125
T+ +V LE A E +V+ DL G HP+HLH F+ + +F
Sbjct: 432 TEYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKF 491
Query: 126 NFVEPSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVH 185
N V P ++ +P N FK +W +H
Sbjct: 492 NLVNPPRRDVAALPGNGYLAIAFK--------------------------LDNPGSWLLH 525
Query: 186 CHLDHHQSWAMQMAFIVKNDRCA 208
CH+ H S + M F+ A
Sbjct: 526 CHIAWHASEGLAMQFVESQSSIA 548
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 50/160 (31%), Gaps = 42/160 (26%)
Query: 71 ASVKVLEYNTAVEIVF-----QGTDLLAGTDHPMHLHXXXXXXXXXXXXNFDRAKDAKRF 125
SV L N+ +E+ F G G HP HLH R+ + +
Sbjct: 369 GSVYTLPLNSTIELSFPITTVNGVTNAPGAPHPFHLHGHAFSVV--------RSAGSSDY 420
Query: 126 NFVEPSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVH 185
N+V P ++T+ + P + I T WF+H
Sbjct: 421 NYVNPVRRDTV----STGNPG----------DNVTIRF-----------TTDNAGPWFLH 455
Query: 186 CHLDHHQSWAMQMAFIVKNDRCAKAKMLPP----LCELYK 221
CH+D H + F A +P LC Y
Sbjct: 456 CHIDFHLEAGFAIVFAEDTPDTASVNPVPTAWSDLCPTYD 495
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 51/154 (33%), Gaps = 35/154 (22%)
Query: 71 ASVKVLEYNTAVEIVFQGTDLLAGTDHPMHLHXXXXXXXXXXXXNFDRAKDAKRFNFVEP 130
SV L ++ +EI T L G HP HLH R+ + +N+ +P
Sbjct: 369 GSVYPLPAHSTIEITLPATALAPGAPHPFHLHGHAFAVV--------RSAGSTTYNYNDP 420
Query: 131 SLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCHLDH 190
++ + G +T Q TD WF+HCH+D
Sbjct: 421 IFRDVVSTGTPAAG------DNVTIRFQ--------------TD---NPGPWFLHCHIDF 457
Query: 191 HQSWAMQMAFIVKNDRCAKAKMLPP----LCELY 220
H + F A +P LC +Y
Sbjct: 458 HLEAGFAIVFAEDVADVKAANPVPKAWSDLCPIY 491
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 57/155 (36%), Gaps = 37/155 (23%)
Query: 70 KASVKVLEYNTAVEIVFQGTDLLAGTDHPMHLHXXXXXXXXXXXXNFDRAKDAKRFNFVE 129
+ SV VL N+++EI F T G HP HLH R+ + +N+
Sbjct: 368 EGSVFVLPSNSSIEISFPATANAPGFPHPFHLHGHAFAVV--------RSAGSSVYNYDN 419
Query: 130 PSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCHLD 189
P ++ + + + +T + + WF+HCH+D
Sbjct: 420 PIFRDVVSTGQPGD--------NVTIRFE-----------------TNNPGPWFLHCHID 454
Query: 190 HH--QSWAMQMAFIVKNDRCAK--AKMLPPLCELY 220
H +A+ MA + + A + LC +Y
Sbjct: 455 FHLDAGFAVVMAEDTPDTKAANPVPQAWSDLCPIY 489
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 55/158 (34%), Gaps = 44/158 (27%)
Query: 70 KASVKVLEYNTAVEIVFQGTDLLAGTDHPMHLHXXXXXXXXXXXXNFD--RAKDAKRFNF 127
+V L N +EI G G +HP HLH NFD R + +N+
Sbjct: 395 GGAVISLPANQVIEISIPG-----GGNHPFHLHGH----------NFDVVRTPGSSVYNY 439
Query: 128 VEPSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCH 187
V P ++ + + + TF+ +TD WF+HCH
Sbjct: 440 VNPVRRDVVSIGGGGDN-VTFR---------------------FVTD---NPGPWFLHCH 474
Query: 188 LDHHQSWAMQMAFIVKNDRCAKAKMLPPLCELYKLCHK 225
+D H + + F A + P + LC K
Sbjct: 475 IDWHLEAGLAVVFAEDIPNIPIANAISPAWD--DLCPK 510
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 52/154 (33%), Gaps = 39/154 (25%)
Query: 71 ASVKVLEYNTAVEIVFQGTDLLAGTDHPMHLHXXXXXXXXXXXXNFDRAKDAKRFNFVEP 130
SV L N VE+V L G HP HLH R+ + +NFV P
Sbjct: 372 GSVYELPRNQVVELVVPAGVL--GGPHPFHLHGHAFSVV--------RSAGSSTYNFVNP 421
Query: 131 SLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCHLDH 190
++ + + +T E + +TD WF HCH++
Sbjct: 422 VKRDVVSL-------------GVTGDEVTIR---------FVTD---NPGPWFFHCHIEF 456
Query: 191 HQSWAMQMAFIVKNDRCAKAKMLP----PLCELY 220
H + + F A P LCE+Y
Sbjct: 457 HLMNGLAIVFAEDMANTVDANNPPVEWAQLCEIY 490
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 52/154 (33%), Gaps = 39/154 (25%)
Query: 71 ASVKVLEYNTAVEIVFQGTDLLAGTDHPMHLHXXXXXXXXXXXXNFDRAKDAKRFNFVEP 130
SV L N VE+V L G HP HLH R+ + +NFV P
Sbjct: 372 GSVYELPRNQVVELVVPAGVL--GGPHPFHLHGHAFSVV--------RSAGSSTYNFVNP 421
Query: 131 SLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCHLDH 190
++ + + +T E + +TD WF HCH++
Sbjct: 422 VKRDVVSL-------------GVTGDEVTIR---------FVTD---NPGPWFFHCHIEF 456
Query: 191 HQSWAMQMAFIVKNDRCAKAKMLP----PLCELY 220
H + + F A P LCE+Y
Sbjct: 457 HLMNGLAIVFAEDMANTVDANNPPVEWAQLCEIY 490
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 4/47 (8%)
Query: 182 WFVHCHLDHHQSWAMQMAFIVKNDRCAKAKMLPP----LCELYKLCH 224
WF+HCH+D H + F A A +P LC Y H
Sbjct: 449 WFLHCHIDWHLDAGFAIVFAEDIPNTASANPVPEAWSNLCPSYDSAH 495
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 44/132 (33%), Gaps = 35/132 (26%)
Query: 70 KASVKVLEYNTAVEIVFQGTDLLAGTDHPMHLHXXXXXXXXXXXXNFDRAKDAKRFNFVE 129
SV L N +EI T G HP HLH R+ + +N+
Sbjct: 367 AGSVYSLPANADIEISLPATAAAPGFPHPFHLHGHVFAVV--------RSAGSSTYNYAN 418
Query: 130 PSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCHLD 189
P ++ + + P + I TD WF+HCH+D
Sbjct: 419 PVYRDVV----STGAPG----------DNVTIRFR--------TD---NPGPWFLHCHID 453
Query: 190 HH--QSWAMQMA 199
H +A+ MA
Sbjct: 454 FHLEAGFAVVMA 465
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 44/132 (33%), Gaps = 35/132 (26%)
Query: 70 KASVKVLEYNTAVEIVFQGTDLLAGTDHPMHLHXXXXXXXXXXXXNFDRAKDAKRFNFVE 129
SV L N +EI T G HP HLH R+ + +N+
Sbjct: 367 AGSVYSLPANADIEISLPATAAAPGFPHPFHLHGHVFAVV--------RSAGSSTYNYAN 418
Query: 130 PSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCHLD 189
P ++ + + P + I TD WF+HCH+D
Sbjct: 419 PVYRDVV----STGAPG----------DNVTIRFR--------TD---NPGPWFLHCHID 453
Query: 190 HH--QSWAMQMA 199
H +A+ MA
Sbjct: 454 FHLEAGFAVVMA 465
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Query: 182 WFVHCHLDHHQSWAMQMAFIVKNDRCAKAKMLP----PLCELYK 221
WF+HCH+D H + F A A +P LC Y
Sbjct: 449 WFLHCHIDFHLEAGFAVVFAEDIPDVASANPVPQAWSDLCPTYD 492
>pdb|8FAB|A Chain A, Crystal Structure Of The Fab Fragment From The Human
Myeloma Immunoglobulin Igg Hil At 1.8 Angstroms
Resolution
pdb|8FAB|C Chain C, Crystal Structure Of The Fab Fragment From The Human
Myeloma Immunoglobulin Igg Hil At 1.8 Angstroms
Resolution
Length = 212
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 2 LTISPGQIIDVLIKANQIPNKY---YMSAKAHSSATDVYDDNTTTTAIVQ 48
+++SPGQ + AN +PN+Y Y + +Y D + I Q
Sbjct: 10 VSVSPGQTARITCSANALPNQYAYWYQQKPGRAPVMVIYKDTQRPSGIPQ 59
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 44/132 (33%), Gaps = 35/132 (26%)
Query: 70 KASVKVLEYNTAVEIVFQGTDLLAGTDHPMHLHXXXXXXXXXXXXNFDRAKDAKRFNFVE 129
SV L N +EI T G HP HLH R+ + +N+
Sbjct: 367 SGSVYSLPANADIEISLPATAAAPGFPHPFHLHGHTFAVV--------RSAGSSTYNYEN 418
Query: 130 PSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCHLD 189
P ++ + + P + I TD WF+HCH+D
Sbjct: 419 PVYRDVV----STGSPG----------DNVTIRFR--------TD---NPGPWFLHCHID 453
Query: 190 HH--QSWAMQMA 199
H +A+ MA
Sbjct: 454 FHLEAGFAVVMA 465
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 182 WFVHCHLDHHQSWAMQMAFIVKN 204
W HCH+ +H M F+V+N
Sbjct: 265 WMYHCHVQNHSDMGMAGMFLVRN 287
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 27.7 bits (60), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 181 AWFVHCHLDHHQSWAMQMAFIVK 203
AW HCH+ H M F+VK
Sbjct: 283 AWMYHCHVQSHSDMGMVGLFLVK 305
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 182 WFVHCHLDHHQSWAMQMAF-IVKNDRCAKAKMLPPLCELYK-LC 223
WF+HCH+D H ++ F +V+ + K P+ + + LC
Sbjct: 449 WFLHCHIDFH----LEGGFAVVQAEDVPDVKATNPVPQAWSDLC 488
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 181 AWFVHCHLDHHQSWAMQMAFIVK 203
AW HCH+ H M F+VK
Sbjct: 245 AWMYHCHVQSHSDMGMVGLFLVK 267
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 181 AWFVHCHLDHHQSWAMQMAFIVK 203
AW HCH+ H M F+VK
Sbjct: 246 AWMYHCHVQSHSDMGMVGLFLVK 268
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 181 AWFVHCHLDHHQSWAMQMAFIVK 203
AW HCH+ H M F+VK
Sbjct: 248 AWMYHCHVQSHSDMGMVGLFLVK 270
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 181 AWFVHCHLDHHQSWAMQMAFIVK 203
AW HCH+ H M F+VK
Sbjct: 242 AWMYHCHVQSHSDMGMVGLFLVK 264
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 182 WFVHCHLDHHQSWAMQMAF-IVKNDRCAKAKMLPPLCELYK-LC 223
WF+HCH+D H ++ F +V+ + K P+ + + LC
Sbjct: 449 WFLHCHIDFH----LEGGFAVVQAEDVPDVKATNPVPQAWSDLC 488
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.133 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,703,287
Number of Sequences: 62578
Number of extensions: 250057
Number of successful extensions: 704
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 654
Number of HSP's gapped (non-prelim): 53
length of query: 226
length of database: 14,973,337
effective HSP length: 95
effective length of query: 131
effective length of database: 9,028,427
effective search space: 1182723937
effective search space used: 1182723937
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)