Query 041358
Match_columns 226
No_of_seqs 164 out of 1670
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 10:26:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041358.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041358hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sqr_A Laccase; multicopper ox 100.0 5.2E-42 1.8E-46 331.0 19.2 193 1-224 302-562 (580)
2 1aoz_A Ascorbate oxidase; oxid 100.0 1.7E-41 5.7E-46 324.7 22.4 118 74-224 419-540 (552)
3 3pxl_A Laccase; 4-copper prote 100.0 1.5E-38 5E-43 302.1 21.1 185 1-224 235-489 (499)
4 1zpu_A Iron transport multicop 100.0 2.6E-38 8.9E-43 302.2 20.5 193 1-225 227-502 (534)
5 3t6v_A Laccase; beta barrel, o 100.0 2.3E-38 8E-43 300.4 19.8 182 1-224 238-489 (495)
6 2q9o_A Laccase-1; multicopper 100.0 1.1E-37 3.7E-42 299.2 19.8 193 1-224 264-541 (559)
7 1v10_A Laccase; multicopper bl 100.0 8.1E-37 2.8E-41 290.8 20.2 180 1-224 261-509 (521)
8 1hfu_A Laccase 1; oxidoreducta 100.0 7.2E-37 2.5E-41 289.9 19.5 184 1-223 234-487 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 2E-34 7E-39 268.6 19.8 161 1-203 237-439 (439)
10 3gyr_A PHS, phenoxazinone synt 100.0 2.3E-32 7.9E-37 261.7 20.7 104 73-206 473-593 (612)
11 3abg_A Bilirubin oxidase; clea 100.0 1.8E-32 6.2E-37 262.0 19.5 172 1-206 268-477 (534)
12 3aw5_A Multicopper oxidase; be 100.0 2.9E-31 1E-35 248.5 16.8 169 1-203 234-448 (448)
13 2uxt_A Protein SUFI, SUFI; oxi 100.0 6.3E-31 2.2E-35 246.3 17.3 162 1-206 243-443 (451)
14 2wsd_A Spore coat protein A; o 100.0 4.8E-30 1.6E-34 243.6 16.2 168 2-204 292-510 (513)
15 3zx1_A Oxidoreductase, putativ 100.0 1.1E-27 3.7E-32 226.6 20.3 164 1-203 270-480 (481)
16 2g23_A PHS, phenoxazinone synt 100.0 3.1E-27 1E-31 229.3 19.8 104 73-206 473-593 (612)
17 3od3_A Blue copper oxidase CUE 99.9 3.7E-25 1.3E-29 209.7 18.1 91 73-202 393-488 (488)
18 2dv6_A Nitrite reductase; elec 99.9 2.2E-22 7.7E-27 186.6 13.4 160 3-206 237-435 (447)
19 3cg8_A Laccase; oxidoreductase 99.9 6.4E-21 2.2E-25 172.9 15.3 95 73-206 210-308 (343)
20 3t9w_A Small laccase, multi-co 99.8 5.8E-21 2E-25 170.2 11.0 98 73-206 191-289 (299)
21 3tas_A Small laccase, multi-co 99.8 8.6E-21 2.9E-25 169.8 11.2 99 73-207 175-274 (313)
22 3kw8_A Laccase, putative coppe 99.8 3.3E-20 1.1E-24 163.2 12.0 95 73-206 169-267 (276)
23 3gdc_A Multicopper oxidase; be 99.8 6.4E-20 2.2E-24 162.3 13.5 159 3-203 110-287 (288)
24 2zwn_A Two-domain type laccase 99.8 1.5E-19 5.2E-24 163.2 11.9 91 73-204 180-277 (339)
25 2j5w_A Ceruloplasmin, ferroxid 99.8 1.5E-19 5E-24 184.6 10.5 91 73-208 971-1062(1065)
26 3g5w_A Multicopper oxidase typ 99.8 9.2E-19 3.1E-23 157.2 8.7 91 73-204 179-276 (318)
27 1sdd_B Coagulation factor V; c 99.7 2.1E-16 7.2E-21 153.4 10.6 91 73-208 240-331 (647)
28 2r7e_B Coagulation factor VIII 99.6 6.7E-17 2.3E-21 160.4 2.0 90 73-207 369-459 (770)
29 1sdd_A Coagulation factor V; c 99.6 7.4E-17 2.5E-21 143.7 0.5 84 73-204 216-300 (306)
30 2r7e_A Coagulation factor VIII 99.5 7.1E-16 2.4E-20 152.5 -1.8 84 73-204 627-711 (742)
31 2r7e_A Coagulation factor VIII 99.5 2.6E-15 8.9E-20 148.4 1.9 83 73-204 245-329 (742)
32 1kbv_A ANIA, major outer membr 99.4 4.4E-13 1.5E-17 120.3 9.3 92 73-205 215-308 (327)
33 2bw4_A Copper-containing nitri 99.4 2.5E-12 8.6E-17 115.4 11.8 92 72-205 231-325 (340)
34 1mzy_A Copper-containing nitri 99.3 2E-11 7E-16 109.3 11.7 91 73-205 226-319 (333)
35 2j5w_A Ceruloplasmin, ferroxid 99.2 8.4E-11 2.9E-15 120.2 10.9 85 73-205 272-357 (1065)
36 2zoo_A Probable nitrite reduct 99.1 1.7E-10 5.7E-15 106.8 10.2 93 73-206 205-299 (442)
37 2aan_A Auracyanin A; cupredoxi 99.0 3E-10 1E-14 89.8 7.0 93 73-203 36-139 (139)
38 3gdc_A Multicopper oxidase; be 99.0 7.2E-10 2.5E-14 97.7 9.6 86 73-206 67-156 (288)
39 2zoo_A Probable nitrite reduct 99.0 5E-10 1.7E-14 103.6 8.7 83 73-205 61-147 (442)
40 1oe1_A Dissimilatory copper-co 99.0 1.9E-09 6.5E-14 96.4 11.3 91 72-205 225-319 (336)
41 3cvb_A Plastocyanin; cupredoxi 99.0 1.3E-09 4.5E-14 81.1 8.6 83 73-203 20-104 (105)
42 2dv6_A Nitrite reductase; elec 98.9 1E-08 3.5E-13 94.7 14.1 83 73-205 196-282 (447)
43 1kbv_A ANIA, major outer membr 98.7 2.4E-08 8.1E-13 89.4 8.6 83 73-205 71-157 (327)
44 1oe1_A Dissimilatory copper-co 98.6 8.5E-08 2.9E-12 85.7 9.2 83 73-205 66-153 (336)
45 2gim_A Plastocyanin; beta shee 98.6 1.4E-07 4.7E-12 70.4 8.3 83 73-203 21-105 (106)
46 1qhq_A Protein (auracyanin); e 98.6 1.2E-07 4.2E-12 74.6 8.1 97 73-203 34-139 (140)
47 1mzy_A Copper-containing nitri 98.5 4.1E-07 1.4E-11 81.2 10.1 83 73-205 65-153 (333)
48 3g5w_A Multicopper oxidase typ 98.5 2.5E-07 8.5E-12 82.7 8.4 88 73-205 35-126 (318)
49 2bw4_A Copper-containing nitri 98.4 1.4E-06 4.9E-11 77.7 10.2 84 73-206 72-160 (340)
50 3kw8_A Laccase, putative coppe 98.4 5.8E-07 2E-11 78.5 7.4 86 73-206 37-142 (276)
51 1aoz_A Ascorbate oxidase; oxid 98.3 6.6E-06 2.3E-10 78.4 13.6 90 73-206 35-125 (552)
52 2plt_A Plastocyanin; electron 98.3 4.7E-06 1.6E-10 61.0 9.1 80 73-203 19-98 (98)
53 1bxv_A Plastocyanin; copper pr 98.3 5.4E-06 1.8E-10 59.7 9.1 72 73-203 20-91 (91)
54 2zwn_A Two-domain type laccase 98.3 1.8E-06 6.1E-11 77.5 8.0 88 73-205 36-127 (339)
55 1v10_A Laccase; multicopper bl 98.2 1.6E-05 5.3E-10 75.4 14.3 121 21-206 24-151 (521)
56 1pcs_A Plastocyanin; electron 98.2 6.8E-06 2.3E-10 60.3 9.3 79 73-203 20-98 (98)
57 3tas_A Small laccase, multi-co 98.2 2.5E-06 8.5E-11 75.8 7.9 86 73-206 43-148 (313)
58 1iby_A Nitrosocyanin; RED copp 98.2 9.6E-06 3.3E-10 61.1 9.9 72 73-203 39-111 (112)
59 2q9o_A Laccase-1; multicopper 98.2 6.3E-06 2.2E-10 78.8 9.9 90 73-206 68-159 (559)
60 1sdd_A Coagulation factor V; c 98.1 2.1E-06 7.2E-11 76.0 5.6 95 72-205 60-167 (306)
61 3cg8_A Laccase; oxidoreductase 98.1 3.9E-06 1.3E-10 75.7 7.4 85 73-205 78-182 (343)
62 1hfu_A Laccase 1; oxidoreducta 98.1 8.5E-06 2.9E-10 76.8 10.0 90 73-206 35-130 (503)
63 3t6v_A Laccase; beta barrel, o 98.1 5.7E-05 1.9E-09 71.3 15.3 90 73-206 36-131 (495)
64 3pxl_A Laccase; 4-copper prote 98.1 4.9E-05 1.7E-09 71.9 14.5 90 73-206 35-130 (499)
65 3t9w_A Small laccase, multi-co 98.1 6E-06 2E-10 73.0 7.6 85 73-205 59-163 (299)
66 1b3i_A PETE protein, protein ( 98.0 9.1E-06 3.1E-10 59.4 6.4 78 73-203 20-97 (97)
67 3sqr_A Laccase; multicopper ox 98.0 6E-05 2.1E-09 72.7 13.9 90 73-206 99-189 (580)
68 2uxt_A Protein SUFI, SUFI; oxi 98.0 1.5E-05 5E-10 74.3 8.4 84 73-206 51-140 (451)
69 1zpu_A Iron transport multicop 98.0 2.2E-05 7.7E-10 74.6 9.7 90 73-206 35-126 (534)
70 4hci_A Cupredoxin 1; structura 98.0 4.4E-05 1.5E-09 56.4 9.3 71 73-203 29-100 (100)
71 3od3_A Blue copper oxidase CUE 98.0 7E-05 2.4E-09 70.8 12.5 116 20-206 17-138 (488)
72 3zx1_A Oxidoreductase, putativ 97.9 9E-05 3.1E-09 69.9 12.8 115 22-206 52-173 (481)
73 1byp_A Protein (plastocyanin); 97.9 3.5E-05 1.2E-09 56.5 7.7 82 73-203 18-99 (99)
74 3aw5_A Multicopper oxidase; be 97.9 2E-05 7E-10 73.3 7.1 84 73-206 39-128 (448)
75 2xu9_A Laccase; oxidoreductase 97.8 2.5E-05 8.5E-10 72.3 6.9 78 72-190 188-266 (439)
76 2cal_A Rusticyanin; iron respi 97.8 7.2E-05 2.5E-09 60.2 8.5 34 169-203 120-154 (154)
77 1kdj_A Plastocyanin; electron 97.8 6.4E-05 2.2E-09 55.3 7.1 83 73-203 18-102 (102)
78 1sdd_B Coagulation factor V; c 97.7 6.3E-05 2.2E-09 72.8 7.6 94 73-206 70-177 (647)
79 2r7e_B Coagulation factor VIII 97.7 2.5E-05 8.4E-10 77.6 4.7 87 73-206 200-299 (770)
80 1fwx_A Nitrous oxide reductase 97.6 0.00024 8.4E-09 68.7 10.8 75 73-204 514-592 (595)
81 1plc_A Plastocyanin; electron 97.6 0.00014 4.9E-09 53.2 6.7 82 73-203 18-99 (99)
82 3abg_A Bilirubin oxidase; clea 97.5 0.0002 6.8E-09 68.2 7.4 84 73-206 70-159 (534)
83 2ov0_A Amicyanin; beta-sandwic 97.3 0.00077 2.6E-08 50.2 7.3 72 73-203 34-105 (105)
84 2g23_A PHS, phenoxazinone synt 97.1 0.0022 7.5E-08 62.1 10.6 38 169-206 153-196 (612)
85 2wsd_A Spore coat protein A; o 97.1 0.00073 2.5E-08 63.7 6.4 35 172-206 138-178 (513)
86 3gyr_A PHS, phenoxazinone synt 96.8 0.0099 3.4E-07 56.3 11.7 31 73-106 66-96 (612)
87 1iuz_A Plastocyanin; electron 96.4 0.021 7E-07 41.5 8.7 27 175-203 72-98 (98)
88 3tu6_A Pseudoazurin (blue copp 96.2 0.013 4.3E-07 45.7 6.8 29 175-205 69-97 (127)
89 3ef4_A Pseudoazurin, blue copp 95.8 0.026 9E-07 43.8 7.2 29 175-205 68-96 (124)
90 1id2_A Amicyanin; beta barrel, 95.7 0.034 1.2E-06 41.2 7.3 25 175-203 82-106 (106)
91 3erx_A Pseudoazurin; copper pr 95.7 0.026 8.9E-07 43.6 6.9 28 175-204 67-94 (123)
92 3c75_A Amicyanin; copper prote 95.2 0.061 2.1E-06 41.6 7.3 25 175-203 108-132 (132)
93 3sbq_A Nitrous-oxide reductase 94.8 0.18 6.1E-06 48.9 10.6 77 73-204 559-637 (638)
94 1paz_A Pseudoazurin precursor; 94.7 0.16 5.4E-06 38.9 8.3 28 175-204 67-94 (123)
95 1pmy_A Pseudoazurin; electron 94.3 0.16 5.6E-06 38.9 7.7 28 175-204 67-94 (123)
96 3ay2_A Lipid modified azurin p 94.0 0.19 6.5E-06 40.9 7.7 28 175-203 137-166 (167)
97 2cua_A Protein (CUA); CUA cent 93.8 0.53 1.8E-05 36.6 9.9 30 172-203 101-134 (135)
98 1cuo_A Protein (azurin ISO-2); 93.0 0.64 2.2E-05 35.9 9.0 26 177-203 103-128 (129)
99 3s8f_B Cytochrome C oxidase su 89.2 3.6 0.00012 33.2 10.2 32 172-203 134-167 (168)
100 2ux6_A Pseudoazurin; type-1 co 88.4 1.3 4.6E-05 33.6 6.8 26 175-204 67-92 (122)
101 2ccw_A Azurin II, AZN-2; elect 88.2 2.7 9.1E-05 32.3 8.5 28 175-203 98-128 (129)
102 1nwp_A Azurin; electron transp 86.4 2.8 9.6E-05 32.2 7.6 25 178-203 103-128 (128)
103 2iaa_C Azurin; quinoprotein, t 86.4 3.8 0.00013 31.4 8.3 28 175-203 97-127 (128)
104 3fsa_A Azurin; copper, cupredo 78.2 6.3 0.00022 30.4 6.7 95 73-203 19-125 (125)
105 3cvb_A Plastocyanin; cupredoxi 60.8 5.4 0.00018 28.2 2.7 27 2-28 64-90 (105)
106 2gim_A Plastocyanin; beta shee 48.2 6.5 0.00022 27.9 1.3 26 3-28 66-91 (106)
107 1iby_A Nitrosocyanin; RED copp 46.9 17 0.00059 26.1 3.5 27 2-29 71-97 (112)
108 1cuo_A Protein (azurin ISO-2); 44.5 15 0.00051 28.0 2.9 25 3-27 86-112 (129)
109 1cyx_A CYOA; electron transpor 41.4 1.2E+02 0.0041 25.1 8.2 32 172-203 82-115 (205)
110 2ccw_A Azurin II, AZN-2; elect 33.7 28 0.00095 26.4 2.9 25 3-27 86-112 (129)
111 3hb3_B Cytochrome C oxidase su 31.7 1.9E+02 0.0064 25.2 8.3 33 172-204 230-264 (298)
112 2gsm_B Cytochrome C oxidase su 25.0 2.9E+02 0.01 23.3 8.2 29 175-203 216-245 (262)
113 1v54_B Cytochrome C oxidase po 23.3 3.1E+02 0.011 22.6 7.9 19 72-90 140-158 (227)
114 1nwp_A Azurin; electron transp 22.7 57 0.002 24.6 2.9 24 3-26 86-111 (128)
115 3lag_A Uncharacterized protein 21.9 2.1E+02 0.007 19.9 5.9 23 93-115 26-50 (98)
116 1x9u_A Umecyanin; cupredoxin, 21.7 84 0.0029 23.4 3.6 31 175-205 75-106 (116)
117 4b9x_A TDRD1, tudor domain-con 20.7 40 0.0014 27.7 1.7 27 2-28 11-37 (226)
No 1
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=5.2e-42 Score=331.04 Aligned_cols=193 Identities=24% Similarity=0.459 Sum_probs=150.4
Q ss_pred CEEeccCceEEEEEEeCCCCCeeEEEEEeccCCCccCCCCCceEEEEEecCCCC---CCCC-C------------C-C--
Q 041358 1 YLTISPGQIIDVLIKANQIPNKYYMSAKAHSSATDVYDDNTTTTAIVQYEGLYP---SSKT-P------------L-P-- 61 (226)
Q Consensus 1 ~l~I~pGQRydVLV~a~~~pg~Y~ira~~~~~~~~~~~~~~~~~AILrY~g~~p---~~~~-~------------l-P-- 61 (226)
.|.|++||||||||++++++|+||||+.+...|.. ...+..++|||+|.++.. .+++ . | |
T Consensus 302 ~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~-~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~~~~~~~~~~L~P~~ 380 (580)
T 3sqr_A 302 TLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCST-NNEAANATGILRYDSSSIANPTSVGTTPRGTCEDEPVASLVPHL 380 (580)
T ss_dssp SEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSC-BTTGGGCEEEEESSTTCCCCCCCCCCCCCCCSCCSCGGGCCBSS
T ss_pred EEEEccceEEEEEEEeCCCCCeEEEEEecccccCc-cCCCCceEEEEEECCCCCCCCCCCCCCccchhhcccccccccCC
Confidence 47899999999999999989999999998766532 123457899999987531 1111 0 0 0
Q ss_pred C--CCC-------------------CCCCc-----------------------ceEEEee----cCCEEEEEEEcCCCCC
Q 041358 62 N--LPS-------------------YDDTK-----------------------ASVKVLE----YNTAVEIVFQGTDLLA 93 (226)
Q Consensus 62 ~--~p~-------------------~~d~~-----------------------~~~~~~~----~g~~v~iv~~n~~~~~ 93 (226)
+ .|. +|... .+++.++ .|++|||+|+|.+..
T Consensus 381 ~~~~~~~~~~~~~l~~~~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~- 459 (580)
T 3sqr_A 381 ALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGF- 459 (580)
T ss_dssp CCBCCSEEEEEEEEEEEESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSS-
T ss_pred CCCCCCccceEEEEEeccCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCcc-
Confidence 0 010 01000 0134443 699999999998532
Q ss_pred CcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCcccchhhhhhhccccceeEEEE
Q 041358 94 GTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLT 173 (226)
Q Consensus 94 ~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 173 (226)
...||||||||+||||++|.|.|+++.+...+|+.+|++|||+.|+++ ||++|
T Consensus 460 ~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~---------------------------g~~~i 512 (580)
T 3sqr_A 460 GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGN---------------------------GYLAI 512 (580)
T ss_dssp CCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTT---------------------------SEEEE
T ss_pred ccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCC---------------------------ceEEE
Confidence 579999999999999999999999877677899999999999999999 99999
Q ss_pred E-eCCCCeeEEEeecchhhhhccceeEEEEEcCcccccccCCCchhHhhccc
Q 041358 174 D-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKNDRCAKAKMLPPLCELYKLCH 224 (226)
Q Consensus 174 r-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~~~~~~~~~~p~~~~~~~~ 224 (226)
| ++||||+|+||||++||+++||+++|+|++++.. ++.++|.++...|.
T Consensus 513 rf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~~i~--~~~~~~~~~~~~C~ 562 (580)
T 3sqr_A 513 AFKLDNPGSWLLHCHIAWHASEGLAMQFVESQSSIA--VKMTDTAIFEDTCA 562 (580)
T ss_dssp EEESCSCEEEEEEECSHHHHHTTCEEEEEESGGGCC--CCHHHHHHHHHHHH
T ss_pred EEEcCCCeeeEEEECcHHHhhCCCcEEEEECHHHHh--hccCCcHHHHHhhH
Confidence 9 9999999999999999999999999999876543 33347888888775
No 2
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=1.7e-41 Score=324.71 Aligned_cols=118 Identities=24% Similarity=0.510 Sum_probs=104.5
Q ss_pred EEeecCCEEEEEEEcCCCCC---CcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCC
Q 041358 74 KVLEYNTAVEIVFQGTDLLA---GTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKC 150 (226)
Q Consensus 74 ~~~~~g~~v~iv~~n~~~~~---~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~ 150 (226)
+.++.|++|+|+|+|.+... ...||||||||+||||++|.|.|++ .+...+|+.+|.+||||.|+++
T Consensus 419 ~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~-~~~~~~n~~~p~~RDTv~vpp~--------- 488 (552)
T 1aoz_A 419 YQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPY--------- 488 (552)
T ss_dssp EEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCG-GGGGGSCCSSCCEESEEEECTT---------
T ss_pred EEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCc-ccccccccCCCCccCeEEeCCC---------
Confidence 56789999999999985221 4579999999999999999899987 4466789999999999999999
Q ss_pred CcccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEEcCcccccccCCCchhHhhccc
Q 041358 151 PKITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKNDRCAKAKMLPPLCELYKLCH 224 (226)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~~~~~~~~~~p~~~~~~~~ 224 (226)
||++|| ++||||.|+|||||+||++.||+++|.|.++ ++.++|.++++|++
T Consensus 489 ------------------g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-----~~~~~P~~~~~C~~ 540 (552)
T 1aoz_A 489 ------------------GWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALACGG 540 (552)
T ss_dssp ------------------EEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSSHH
T ss_pred ------------------ceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-----hhccCCcchhhhhc
Confidence 999999 9999999999999999999999999998653 56678999999975
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=1.5e-38 Score=302.07 Aligned_cols=185 Identities=26% Similarity=0.491 Sum_probs=140.4
Q ss_pred CEEeccCceEEEEEEeCCCCCeeEEEEEeccCCCccCCCCCceEEEEEecCCC---CCCCC-------------CCC--C
Q 041358 1 YLTISPGQIIDVLIKANQIPNKYYMSAKAHSSATDVYDDNTTTTAIVQYEGLY---PSSKT-------------PLP--N 62 (226)
Q Consensus 1 ~l~I~pGQRydVLV~a~~~pg~Y~ira~~~~~~~~~~~~~~~~~AILrY~g~~---p~~~~-------------~lP--~ 62 (226)
.|.|++||||||||++++.+|+||||+.+...+.. ......+|||+|+++. |.++. ++. .
T Consensus 235 ~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~--~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~L~p~~~~~ 312 (499)
T 3pxl_A 235 SIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVG--FDGGINSAILRYDGAPAVEPTTNQTTSVKPLNEVDLHPLVSTP 312 (499)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCS--CGGGTTEEEEEETTSCSSCCCCCCCCCSSBCCGGGCCBSSCCC
T ss_pred eEEECCCcEEEEEEECCCCCceEEEEEecccCccc--cCCCceEEEEEeCCCCCCCCCCCCCCCCccccccccccccccc
Confidence 47899999999999999988999999988654432 1233468999998753 11110 010 0
Q ss_pred CCC-----------------------CCCCc-------------------------ceEEEeecCCEEEEEEEcCCCCCC
Q 041358 63 LPS-----------------------YDDTK-------------------------ASVKVLEYNTAVEIVFQGTDLLAG 94 (226)
Q Consensus 63 ~p~-----------------------~~d~~-------------------------~~~~~~~~g~~v~iv~~n~~~~~~ 94 (226)
.|. +|... .+++.++.|++|||+|+|+.....
T Consensus 313 ~p~~~~~~~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~ 392 (499)
T 3pxl_A 313 VPGAPSSGGVDKAINMAFNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPG 392 (499)
T ss_dssp CSSCSSTTCSSEEEECCEEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCS
T ss_pred CCCcccCCCCcEEEEEEEEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCC
Confidence 010 01101 115789999999999995322257
Q ss_pred cCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCC---CCCCCCCCCCCcccchhhhhhhccccceeEE
Q 041358 95 TDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPK---NVNGPKTFKCPKITCHEQALIHMNMCLHAWV 171 (226)
Q Consensus 95 ~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (226)
..||||||||+|+|++.+ | ...+|+.+|.+|||+.|++ | +|+
T Consensus 393 ~~HP~HLHGh~F~Vl~~~-g-------~~~~n~~~P~~rDtv~v~~~~pg---------------------------~~~ 437 (499)
T 3pxl_A 393 APHPFHLHGHTFAVVRSA-G-------STVYNYDNPIFRDVVSTGTPAAG---------------------------DNV 437 (499)
T ss_dssp CSCEEEETTCCEEEEECT-T-------CCCCCSSSCCEESEEECCCGGGT---------------------------CEE
T ss_pred CCccceecCCcEEEEecc-C-------CcccccCCCCccceEEcCCcCCC---------------------------cEE
Confidence 899999999999999864 2 2357889999999999997 7 999
Q ss_pred EEE-eCCCCeeEEEeecchhhhhccceeEEEEEcCcccccccCCCchhHhhccc
Q 041358 172 LTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKNDRCAKAKMLPPLCELYKLCH 224 (226)
Q Consensus 172 ~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~~~~~~~~~~p~~~~~~~~ 224 (226)
+|| ++||||.|+||||++||+++||+++|++.+++.. +..++|.++...|.
T Consensus 438 ~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~~~~--~~~~~p~~~~~~C~ 489 (499)
T 3pxl_A 438 TIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDTPDVK--AVNPVPQAWSDLCP 489 (499)
T ss_dssp EEEEECCSCEEEEEEESSHHHHHTTCEEEEEESGGGHH--HHSCCCHHHHTHHH
T ss_pred EEEEEcCCCceEEEEeCChhHhhCCCcEEEEEChhHhc--cccCCCHHHHHhhh
Confidence 999 9999999999999999999999999998876653 34457888888885
No 4
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-38 Score=302.16 Aligned_cols=193 Identities=19% Similarity=0.304 Sum_probs=141.5
Q ss_pred CEEeccCceEEEEEEeCCCC-CeeEEEEEeccCCCc--cCCCCCceEEEEEecCCCCCCC----CCCC------------
Q 041358 1 YLTISPGQIIDVLIKANQIP-NKYYMSAKAHSSATD--VYDDNTTTTAIVQYEGLYPSSK----TPLP------------ 61 (226)
Q Consensus 1 ~l~I~pGQRydVLV~a~~~p-g~Y~ira~~~~~~~~--~~~~~~~~~AILrY~g~~p~~~----~~lP------------ 61 (226)
.|.|++||||||||++++.+ ++|||++.....+.. +...+...+|||+|.++.+.+. ..++
T Consensus 227 ~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~ 306 (534)
T 1zpu_A 227 MLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYE 306 (534)
T ss_dssp CEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSS
T ss_pred eEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCC
Confidence 47899999999999998764 799999987654321 1123557789999987632110 0011
Q ss_pred C--C-CC----------------------CCCCc----------------------------ceEEEeecCCEEEEEEEc
Q 041358 62 N--L-PS----------------------YDDTK----------------------------ASVKVLEYNTAVEIVFQG 88 (226)
Q Consensus 62 ~--~-p~----------------------~~d~~----------------------------~~~~~~~~g~~v~iv~~n 88 (226)
. + +. +|... ..++.++.|++|+|+|+|
T Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N 386 (534)
T 1zpu_A 307 KEAIYGEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNN 386 (534)
T ss_dssp CCCCCCSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEE
T ss_pred CCCCCCCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeC
Confidence 0 0 00 00000 125788999999999999
Q ss_pred CCCCCCcCcceeecCceEEEEecCCC----------CCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCcccchhh
Q 041358 89 TDLLAGTDHPMHLHGYSFYVVGGGFG----------NFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPKITCHEQ 158 (226)
Q Consensus 89 ~~~~~~~~HP~HlHG~~f~vv~~g~g----------~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~~~~~~~ 158 (226)
. +...||||||||+|+||++|.+ .|+... ... +..+|.+||||.|+++
T Consensus 387 ~---~~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~-~~~-~~~~p~~RDTv~V~pg----------------- 444 (534)
T 1zpu_A 387 Q---DTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDN-HPA-FPEYPMRRDTLYVRPQ----------------- 444 (534)
T ss_dssp C---SSSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTB-CCC-CCSSCEEESEEEECTT-----------------
T ss_pred C---CCCCCCeEecCCceEEEeecCCccccccCcccccCccc-ccc-ccCCCCeeeEEEeCCC-----------------
Confidence 8 4789999999999999998754 454432 122 2468999999999999
Q ss_pred hhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEEcCcccccccCCCchhHhhcccC
Q 041358 159 ALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKNDRCAKAKMLPPLCELYKLCHK 225 (226)
Q Consensus 159 ~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~~~~~~~~~~p~~~~~~~~~ 225 (226)
+|++|| ++||||.|+|||||+||++.||+++|+|.+++..++...++|.++..||.+
T Consensus 445 ----------g~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~~~~~~~~~~p~~~~~~C~~ 502 (534)
T 1zpu_A 445 ----------SNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPFGIQDAHSQQLSENHLEVCQS 502 (534)
T ss_dssp ----------CEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHHHCGGGSCCHHHHHHHHH
T ss_pred ----------CEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECccccccccccCCChhHhhhhhc
Confidence 999999 999999999999999999999999999987554321114567788888753
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=2.3e-38 Score=300.36 Aligned_cols=182 Identities=27% Similarity=0.464 Sum_probs=139.3
Q ss_pred CEEeccCceEEEEEEeCCCCCeeEEEEEeccCCCccCCCCCceEEEEEecCCC---CCCC--C------------CCC--
Q 041358 1 YLTISPGQIIDVLIKANQIPNKYYMSAKAHSSATDVYDDNTTTTAIVQYEGLY---PSSK--T------------PLP-- 61 (226)
Q Consensus 1 ~l~I~pGQRydVLV~a~~~pg~Y~ira~~~~~~~~~~~~~~~~~AILrY~g~~---p~~~--~------------~lP-- 61 (226)
.|.|++||||||||++++++|+||||+.+...+.. ..+...+|||+|+++. |.++ + ++.
T Consensus 238 ~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~--~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~~L~p~~~~ 315 (495)
T 3t6v_A 238 EIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGEG--FDGGINSAILRYDGATTADPVTVASTVHTKCLIETDLHPLSRN 315 (495)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCS--CGGGTTEEEEEETTSCSSCCCCCCCSSCSSBCCGGGCCBSSCC
T ss_pred eEEEcCceEEEEEEECCCCCceEEEEEecccCccc--cCCCceEEEEEECCCCCCCCCCCCCCCCccccccccccccccc
Confidence 47899999999999999988999999988654432 1233468999998753 1110 0 010
Q ss_pred CCCC-----C------------------CCCcc-------------------------eEEEeecCCEEEEEEE-cCCCC
Q 041358 62 NLPS-----Y------------------DDTKA-------------------------SVKVLEYNTAVEIVFQ-GTDLL 92 (226)
Q Consensus 62 ~~p~-----~------------------~d~~~-------------------------~~~~~~~g~~v~iv~~-n~~~~ 92 (226)
..|. . |...| +++.++.|++|||+|+ |.
T Consensus 316 ~~p~~~~~~~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~--- 392 (495)
T 3t6v_A 316 GVPGNPHQGGADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGA--- 392 (495)
T ss_dssp CCSSCSSTTCSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCS---
T ss_pred cCCCccCCCCCcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCC---
Confidence 0010 0 01001 1478999999999999 44
Q ss_pred CCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCC-CCCCCCCCCCCcccchhhhhhhccccceeEE
Q 041358 93 AGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPK-NVNGPKTFKCPKITCHEQALIHMNMCLHAWV 171 (226)
Q Consensus 93 ~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (226)
....||||||||+|+|++.+ | ...+|+.+|.+|||+.|++ | +|+
T Consensus 393 ~~~~HP~HLHGh~F~vl~~~-g-------~~~~n~~~P~~rDtv~v~~~g---------------------------~~~ 437 (495)
T 3t6v_A 393 AGGPHPFHLHGHDFAVSESA-S-------NSTSNYDDPIWRDVVSIGGVG---------------------------DNV 437 (495)
T ss_dssp SSCCCEEEETTCCEEEEECT-T-------CCCCCSSSCCEESEEECCSTT---------------------------CEE
T ss_pred CCCCcceeecCCcEEEEecC-C-------CCCcccCCCCCccEEEcCCCC---------------------------cEE
Confidence 57899999999999999864 2 2357888999999999997 7 999
Q ss_pred EEE-eCCCCeeEEEeecchhhhhccceeEEEEEcCcccccccCCCchhHhhccc
Q 041358 172 LTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKNDRCAKAKMLPPLCELYKLCH 224 (226)
Q Consensus 172 ~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~~~~~~~~~~p~~~~~~~~ 224 (226)
+|| ++||||.|+||||++||+++||+++|++.+++.. +..++|.++...|.
T Consensus 438 ~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~~~~--~~~~~p~~~~~~C~ 489 (495)
T 3t6v_A 438 TIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTA--SANPVPEAWSNLCP 489 (495)
T ss_dssp EEEEECCSCEEEEEEESCHHHHHTTCEEEEEETHHHHH--HHCCCCHHHHHHHH
T ss_pred EEEEEcCCCeeEEEEecchhHhhcCCeEEEEEChhHhc--cccCCCHHHHHHhh
Confidence 999 9999999999999999999999999998876543 34567888888885
No 6
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=1.1e-37 Score=299.15 Aligned_cols=193 Identities=25% Similarity=0.495 Sum_probs=140.9
Q ss_pred CEEeccCceEEEEEEeCCCCCeeEEEEEe--ccCCCccCCCCCceEEEEEecCCC---CCCCC-C-----------C-CC
Q 041358 1 YLTISPGQIIDVLIKANQIPNKYYMSAKA--HSSATDVYDDNTTTTAIVQYEGLY---PSSKT-P-----------L-PN 62 (226)
Q Consensus 1 ~l~I~pGQRydVLV~a~~~pg~Y~ira~~--~~~~~~~~~~~~~~~AILrY~g~~---p~~~~-~-----------l-P~ 62 (226)
.|.|+|||||||||++++.+|+|||++.+ ...+.. ..+...+|||+|.++. |.+.. + + |.
T Consensus 264 ~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~--~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~ 341 (559)
T 2q9o_A 264 SLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGG--SLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPV 341 (559)
T ss_dssp CEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCC--BSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBS
T ss_pred eEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCC--CCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccC
Confidence 47899999999999999888999999987 433321 1234568999998753 11110 0 0 00
Q ss_pred ----CCC--C------------------------CCCcc-----------------------eEEEeec-CCEEEEEEEc
Q 041358 63 ----LPS--Y------------------------DDTKA-----------------------SVKVLEY-NTAVEIVFQG 88 (226)
Q Consensus 63 ----~p~--~------------------------~d~~~-----------------------~~~~~~~-g~~v~iv~~n 88 (226)
.|. . |...| +++.++. +++++|+++|
T Consensus 342 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n 421 (559)
T 2q9o_A 342 VPRSVPVNSFVKRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIEN 421 (559)
T ss_dssp SCCBCCCTTCCCCGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEE
T ss_pred CCCCCCCcccccceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeC
Confidence 010 0 00000 1244544 4567778888
Q ss_pred CCC-CCCcCcceeecCceEEEEecCC---------CCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCcccchhh
Q 041358 89 TDL-LAGTDHPMHLHGYSFYVVGGGF---------GNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPKITCHEQ 158 (226)
Q Consensus 89 ~~~-~~~~~HP~HlHG~~f~vv~~g~---------g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~~~~~~~ 158 (226)
... .....||||||||+|+||++|. |.|++..+...+|+.+|.+||||.|+++
T Consensus 422 ~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~----------------- 484 (559)
T 2q9o_A 422 DPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAG----------------- 484 (559)
T ss_dssp CTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTT-----------------
T ss_pred CCccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCC-----------------
Confidence 630 0167999999999999999987 7887654456789999999999999999
Q ss_pred hhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEEcCcccccccCCC--chhHhhccc
Q 041358 159 ALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKNDRCAKAKMLPP--LCELYKLCH 224 (226)
Q Consensus 159 ~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~~~~~~~~~~--p~~~~~~~~ 224 (226)
||++|| ++||||.|||||||++|+++||+++|+|.+++. .++.++ |.++...|.
T Consensus 485 ----------g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~~--~~~~~~~~p~~~~~~C~ 541 (559)
T 2q9o_A 485 ----------GWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADL--RQRISQEDEDDFNRVCD 541 (559)
T ss_dssp ----------SEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHH--GGGCCHHHHHHHHHHHH
T ss_pred ----------ccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcchh--hhccccCCchhhhhhcc
Confidence 999999 999999999999999999999999999987654 355555 776765553
No 7
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=8.1e-37 Score=290.82 Aligned_cols=180 Identities=28% Similarity=0.450 Sum_probs=135.2
Q ss_pred CEEeccCceEEEEEEeCCCCCeeEEEEEeccCCCccCCCCCceEEEEEecCCCC---CCCC------------CC--CCC
Q 041358 1 YLTISPGQIIDVLIKANQIPNKYYMSAKAHSSATDVYDDNTTTTAIVQYEGLYP---SSKT------------PL--PNL 63 (226)
Q Consensus 1 ~l~I~pGQRydVLV~a~~~pg~Y~ira~~~~~~~~~~~~~~~~~AILrY~g~~p---~~~~------------~l--P~~ 63 (226)
.|.|+|||||||||++++.+|+|||++.+...+.. .......|||+|.+... .++. ++ +..
T Consensus 261 ~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~--~~~~~~~ail~y~~~~~~~p~~~~~~~~~~~~~~l~p~~~~~~ 338 (521)
T 1v10_A 261 SLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNG--FTGGINSAIFRYQGAAVAEPTTSQNSGTALNEANLIPLINPGA 338 (521)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCS--CGGGTTEEEEEETTCCSCCCCCCCCCSCBCCGGGCCBSSCCCC
T ss_pred eEEEcccceEEEEEEcCCCCCceeeeecccccccc--CCCCceeEEEEECCCCCCCCCCCCCcccccchhhcccCCcccC
Confidence 37899999999999999888999999987654321 11223479999987531 1110 01 001
Q ss_pred CC-----C-----------CCC--cc--------------------------------eEEEeecCCEEEEEEEcCCCCC
Q 041358 64 PS-----Y-----------DDT--KA--------------------------------SVKVLEYNTAVEIVFQGTDLLA 93 (226)
Q Consensus 64 p~-----~-----------~d~--~~--------------------------------~~~~~~~g~~v~iv~~n~~~~~ 93 (226)
|. . +.. .| .++.++.|++|||+++|
T Consensus 339 p~~~~~~~~~~~~~l~~~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N----- 413 (521)
T 1v10_A 339 PGNPVPGGADINLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG----- 413 (521)
T ss_dssp SSCSSTTCSSEEEECCEECCSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC-----
T ss_pred CCcccCCcceEEEEEEEecCCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC-----
Confidence 10 0 000 11 24678999999999999
Q ss_pred CcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEc-CCCCCCCCCCCCCcccchhhhhhhccccceeEEE
Q 041358 94 GTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMV-PKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVL 172 (226)
Q Consensus 94 ~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (226)
...||||||||+|+|+++|.+ ..+|+.+|.+||||.| +++ +|++
T Consensus 414 ~~~HP~HLHGh~F~Vl~~~~~--------~~~n~~~p~~rDTV~V~p~g---------------------------g~v~ 458 (521)
T 1v10_A 414 GGNHPFHLHGHNFDVVRTPGS--------SVYNYVNPVRRDVVSIGGGG---------------------------DNVT 458 (521)
T ss_dssp CBSCEEEESSCCEEEEECTTC--------SCCCCSSCCEESEEECCBSS---------------------------CEEE
T ss_pred CCCCCEEEccceEEEEecCCC--------CccccCCCCeeeeEEeCCCC---------------------------cEEE
Confidence 368999999999999998744 2367889999999999 899 9999
Q ss_pred EE-eCCCCeeEEEeecchhhhhccceeEEEEEcCcccccccCCCchhHhhccc
Q 041358 173 TD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKNDRCAKAKMLPPLCELYKLCH 224 (226)
Q Consensus 173 ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~~~~~~~~~~p~~~~~~~~ 224 (226)
|| ++||||.|+||||++||++.||+++|+|.+++.. ++.++|.++...|.
T Consensus 459 Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~~--~~~~~p~~~~~~C~ 509 (521)
T 1v10_A 459 FRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNIP--IANAISPAWDDLCP 509 (521)
T ss_dssp EEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGHH--HHSCCCHHHHTHHH
T ss_pred EEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcchh--hccCCChHHhhhch
Confidence 99 9999999999999999999999999999876543 45556666555443
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=7.2e-37 Score=289.89 Aligned_cols=184 Identities=28% Similarity=0.464 Sum_probs=135.7
Q ss_pred CEEeccCceEEEEEEeCCCCCeeEEEEEeccCCCcc--CCCCCceEEEEEecCCCC---CCC--C---CC----------
Q 041358 1 YLTISPGQIIDVLIKANQIPNKYYMSAKAHSSATDV--YDDNTTTTAIVQYEGLYP---SSK--T---PL---------- 60 (226)
Q Consensus 1 ~l~I~pGQRydVLV~a~~~pg~Y~ira~~~~~~~~~--~~~~~~~~AILrY~g~~p---~~~--~---~l---------- 60 (226)
.|.|+|||||||||++++.+|+|||++.+...+... ........|||+|.++.. .++ + .+
T Consensus 234 ~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~~l~~~~l~p~~~ 313 (503)
T 1hfu_A 234 RLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPAQLNEADLHALID 313 (503)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSCCBCCGGGCBBSSS
T ss_pred eEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCccCCCccccccccCc
Confidence 378999999999999998889999999876432210 011224479999987532 111 0 00
Q ss_pred CCCCC-----CCC------------------Cc-------------------------ceEEEeecCCEEEEEEEcCCCC
Q 041358 61 PNLPS-----YDD------------------TK-------------------------ASVKVLEYNTAVEIVFQGTDLL 92 (226)
Q Consensus 61 P~~p~-----~~d------------------~~-------------------------~~~~~~~~g~~v~iv~~n~~~~ 92 (226)
+..|. ..+ .. ..++.++.|++|||+++|..
T Consensus 314 ~~~p~~~~~~~~~~~~~l~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~-- 391 (503)
T 1hfu_A 314 PAAPGIPTPGAADVNLRFQLGFSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGV-- 391 (503)
T ss_dssp CSCSSCSSTTCSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCS--
T ss_pred cCCCCcccCCcceEEEEEEeeccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCC--
Confidence 00111 000 00 12467899999999999643
Q ss_pred CCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEc-CCCCCCCCCCCCCcccchhhhhhhccccceeEE
Q 041358 93 AGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMV-PKNVNGPKTFKCPKITCHEQALIHMNMCLHAWV 171 (226)
Q Consensus 93 ~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (226)
+...||||||||+|+|+++|.+ ..+|+.+|.+||||.| +++ +|+
T Consensus 392 ~~~~HP~HLHGh~F~Vl~~~~~--------~~~n~~~p~~rDTV~V~ppg---------------------------~~v 436 (503)
T 1hfu_A 392 LGGPHPFHLHGHAFSVVRSAGS--------STYNFVNPVKRDVVSLGVTG---------------------------DEV 436 (503)
T ss_dssp TTCCCEEEETTCCEEEEECTTC--------CCCCCSSBCEESEEECCSTT---------------------------CEE
T ss_pred CCCCCCEEEecceEEEEecCCC--------CccccCCCCeeeeEEecCCC---------------------------ceE
Confidence 4789999999999999998744 2367788999999999 899 999
Q ss_pred EEE-eCCCCeeEEEeecchhhhhccceeEEEEEcCcccccccCCCchhHhhcc
Q 041358 172 LTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKNDRCAKAKMLPPLCELYKLC 223 (226)
Q Consensus 172 ~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~~~~~~~~~~p~~~~~~~ 223 (226)
+|| ++||||.|+||||++||++.||++.|+|.+++.. ++.++|.++...|
T Consensus 437 ~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~~~--~~~~~p~~~~~~C 487 (503)
T 1hfu_A 437 TIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTV--DANNPPVEWAQLC 487 (503)
T ss_dssp EEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHHH--HHCCCCHHHHHHH
T ss_pred EEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchhhh--hccCCChHHhhhc
Confidence 999 9999999999999999999999999999765542 4555666654444
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=2e-34 Score=268.64 Aligned_cols=161 Identities=18% Similarity=0.216 Sum_probs=123.8
Q ss_pred CEEeccCceEEEEEEeCCCCCeeEEEEEeccCCCc-------------cCCCCCceEEEEEecCCCCCCC-----CCCCC
Q 041358 1 YLTISPGQIIDVLIKANQIPNKYYMSAKAHSSATD-------------VYDDNTTTTAIVQYEGLYPSSK-----TPLPN 62 (226)
Q Consensus 1 ~l~I~pGQRydVLV~a~~~pg~Y~ira~~~~~~~~-------------~~~~~~~~~AILrY~g~~p~~~-----~~lP~ 62 (226)
.|.|+|||||||||++++ +|+|||++.+..++.. ........+++|+|.++....+ .+++.
T Consensus 237 ~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~l~~~~~ 315 (439)
T 2xu9_A 237 ELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPLPLPKALSPFPT 315 (439)
T ss_dssp CEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCCCCCCSCCCCCCC
T ss_pred eEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCccccCcccCCCccc
Confidence 478999999999999998 8999999976543321 0112346789999987642111 11112
Q ss_pred CCC-------------------CCCCcc----eEEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCc
Q 041358 63 LPS-------------------YDDTKA----SVKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRA 119 (226)
Q Consensus 63 ~p~-------------------~~d~~~----~~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~ 119 (226)
++. .|...| ..+.++.|++++|+|+|. +...||||||||+|+|++++.+.
T Consensus 316 l~~~~~~r~~~l~~~~~g~~~~iNg~~~~~~~~~~~~~~g~~~~~~~~N~---~~~~HP~HLHG~~F~Vl~~~g~~---- 388 (439)
T 2xu9_A 316 LPAPVVTRRLVLTEDMMAARFFINGQVFDHRRVDLKGQAQTVEVWEVENQ---GDMDHPFHLHVHPFQVLSVGGRP---- 388 (439)
T ss_dssp CCCCSEEEEEEEEEEGGGTEEEETTBCCCTTCCCEEECTTCEEEEEEEEC---SSSCEEEEESSCCBEEEEETTEE----
T ss_pred CCCCCcceEEEEEeeccCceEeECCEECCCCCCceecCCCCEEEEEEEcC---CCCCCCceeCCCcEEEEeeCCCC----
Confidence 211 011111 147889999999999998 47899999999999999986432
Q ss_pred cccccCCCCCCCccceEEcCCCCCCCCCCCCCcccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhcccee
Q 041358 120 KDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQM 198 (226)
Q Consensus 120 ~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~ 198 (226)
+.+|.|||||.|+++ +|++|| ++||||.|+|||||++|++.|||+
T Consensus 389 -------~~~p~~rDTv~v~p~---------------------------~~v~i~f~adnpG~w~~HCHil~H~~~GMm~ 434 (439)
T 2xu9_A 389 -------FPYRAWKDVVNLKAG---------------------------EVARLLVPLREKGRTVFHCHIVEHEDRGMMG 434 (439)
T ss_dssp -------CSSCCCBSEEEECTT---------------------------CEEEEEEECCSCEEEEEEESSHHHHHTTCEE
T ss_pred -------CCCCCCeEEEEeCCC---------------------------CEEEEEEEcCCCCCEEEECCcchhhhcCCcE
Confidence 246899999999999 999999 999999999999999999999999
Q ss_pred EEEEE
Q 041358 199 AFIVK 203 (226)
Q Consensus 199 ~~~v~ 203 (226)
.|.|+
T Consensus 435 ~~~Vg 439 (439)
T 2xu9_A 435 VLEVG 439 (439)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99873
No 10
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=2.3e-32 Score=261.70 Aligned_cols=104 Identities=20% Similarity=0.209 Sum_probs=86.2
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCc---------------cccccCCCCCCCccceEE
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRA---------------KDAKRFNFVEPSLQNTIM 137 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~---------------~~~~~~n~~~p~~rDtv~ 137 (226)
.+.++.|++++|+|+|. +...||||||||+||||+++.+.++.. ......+..++.|||||.
T Consensus 473 ~~~~~~g~~~~w~i~N~---~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~ 549 (612)
T 3gyr_A 473 GFTIGEGTHEQWTFLNL---SPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQ 549 (612)
T ss_dssp CEEEETTCEEEEEEEEC---SSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEE
T ss_pred ceEeCCCCEEEEEEEcC---CCCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEE
Confidence 46788999999999998 578999999999999998643222110 012235567788999999
Q ss_pred cCCCCCCCCCCCCCcccchhhhhhhccccceeEEEEE-e-CCCCeeEEEeecchhhhhccceeEEEEEcCc
Q 041358 138 VPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTD-T-CHKKRAWFVHCHLDHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 138 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir-~-adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~ 206 (226)
|+++ +|++|| + +||||.|||||||++|++.|||..|.|.+++
T Consensus 550 v~~~---------------------------~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~ 593 (612)
T 3gyr_A 550 VPGP---------------------------QGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp ECSS---------------------------EEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHH
T ss_pred ECCC---------------------------CEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCc
Confidence 9999 999999 6 8999999999999999999999999998644
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=1.8e-32 Score=261.97 Aligned_cols=172 Identities=17% Similarity=0.240 Sum_probs=122.6
Q ss_pred CEEeccCceEEEEEEeCCCCC-eeEEEEEecc-CCCccCCCCCceEEEEEecCCCCC-------CCCCCCCCC--C----
Q 041358 1 YLTISPGQIIDVLIKANQIPN-KYYMSAKAHS-SATDVYDDNTTTTAIVQYEGLYPS-------SKTPLPNLP--S---- 65 (226)
Q Consensus 1 ~l~I~pGQRydVLV~a~~~pg-~Y~ira~~~~-~~~~~~~~~~~~~AILrY~g~~p~-------~~~~lP~~p--~---- 65 (226)
.|.|++||||||||++++.+| +|||++.... .+...........+|++|...... .+..|..++ .
T Consensus 268 ~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P~~L~~~~~p~~~~~ 347 (534)
T 3abg_A 268 LLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVPFPSPTTN 347 (534)
T ss_dssp CEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCCCCCCCCSCCCCCCC
T ss_pred eEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCccccccCCCCCCccc
Confidence 478999999999999998777 6999985422 222111112234688888643211 011111111 0
Q ss_pred ---------------CCCCcce------EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCcccccc
Q 041358 66 ---------------YDDTKAS------VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKR 124 (226)
Q Consensus 66 ---------------~~d~~~~------~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~ 124 (226)
.|...|. ...++.|++++|+|+|.+ ....||||||||+|+|+++|.|.+.. ..
T Consensus 348 ~~~~~~~~~~~~~w~iNG~~f~~~~~p~l~~v~~G~~~~w~i~N~~--~~~~HP~HLHG~~F~Vl~~~~g~~~~----~~ 421 (534)
T 3abg_A 348 TPRQFRFGRTGPTWTINGVAFADVQNRLLANVPVGTVERWELINAG--NGWTHPIHIHLVDFKVISRTSGNNAR----TV 421 (534)
T ss_dssp CCEEEECSCCCSTTCCCCBTTBCTTSCCCCEECTTCEEEEEEEECS--SSCCCCEEESSCCEEEEEESSCCSSS----CC
T ss_pred cceEEEEeccCceeEECCcccCCCCCcceeeccCCCEEEEEEEcCC--CCCCcCEEECCeeEEEEEEcCCCCcC----cC
Confidence 0111121 356889999999999974 34689999999999999987664321 12
Q ss_pred CCCCCCCccceEEcCCCCCCCCCCCCCcccchhhhhhhccccceeEEEEE-e-CCCCeeEEEeecchhhhhccceeEEEE
Q 041358 125 FNFVEPSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTD-T-CHKKRAWFVHCHLDHHQSWAMQMAFIV 202 (226)
Q Consensus 125 ~n~~~p~~rDtv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir-~-adnpG~W~~HCHi~~H~~~Gm~~~~~v 202 (226)
.++.+ .|||||.|+++ +|++|| + +||||.|+||||+++|++.|||+.|.|
T Consensus 422 ~~~~~-~~rDTV~v~pg---------------------------~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V 473 (534)
T 3abg_A 422 MPYES-GLKDVVWLGRR---------------------------ETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNA 473 (534)
T ss_dssp CSGGG-SCBSEECCCSS---------------------------EEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEE
T ss_pred Ccccc-CCcCeEEcCCC---------------------------CEEEEEEEECCCCccEEEecChHHHHhcCCceEEEE
Confidence 44455 89999999999 999999 7 999999999999999999999999999
Q ss_pred EcCc
Q 041358 203 KNDR 206 (226)
Q Consensus 203 ~~~~ 206 (226)
...+
T Consensus 474 ~~~~ 477 (534)
T 3abg_A 474 TVLP 477 (534)
T ss_dssp CSSC
T ss_pred Eecc
Confidence 8654
No 12
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.97 E-value=2.9e-31 Score=248.49 Aligned_cols=169 Identities=17% Similarity=0.250 Sum_probs=118.7
Q ss_pred CEEeccCceEEEEEEeCCCCCeeEEEEEeccCCCc---------cCCCCCceEEEEEecCCCCC-CCCCCCCCCCC----
Q 041358 1 YLTISPGQIIDVLIKANQIPNKYYMSAKAHSSATD---------VYDDNTTTTAIVQYEGLYPS-SKTPLPNLPSY---- 66 (226)
Q Consensus 1 ~l~I~pGQRydVLV~a~~~pg~Y~ira~~~~~~~~---------~~~~~~~~~AILrY~g~~p~-~~~~lP~~p~~---- 66 (226)
.|.|+|||||||||++++ +.|||++.+...+.. .+......+++|+|.++... ++..|+.+|..
T Consensus 234 ~l~l~pgeR~dvlv~~~~--~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~ 311 (448)
T 3aw5_A 234 ALFLAPAERAEVVVELGE--GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKP 311 (448)
T ss_dssp CEEECTTCEEEEEEEECS--EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCC
T ss_pred eEEECCcceEEEEEECCC--CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCC
Confidence 478999999999999983 699999987653221 01223467899999765311 12223322211
Q ss_pred -----------------CCCcce----EEE-eecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCcccccc
Q 041358 67 -----------------DDTKAS----VKV-LEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKR 124 (226)
Q Consensus 67 -----------------~d~~~~----~~~-~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~ 124 (226)
|...|. .+. ++.|++|+|+|+|.+ ....||||||||+|||++++ |.+....+...
T Consensus 312 ~~~~~~~l~~~~~~~~iNg~~~~~~~p~~~~~~~g~~v~~~i~N~~--~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~ 388 (448)
T 3aw5_A 312 TRTRRFALSLSGMQWTINGMFWNASNPLFEHVSVEGVELWEIVNDK--ASMPHPMHLHGFPMWIIERK-DSPRQVAELAV 388 (448)
T ss_dssp SEEEEEEEEEETTEEEETTBCCCTTCTTCCCEEECEEEEEEEEECS--SSCCEEEEESSSCBEEEEEE-SCCHHHHTTCC
T ss_pred CceEEEEEeCCCceeeECCCcCCCCCCceeccCCCCeEEEEEEcCC--CCCCcCEEECCceEEEEEec-CCCcccccccc
Confidence 111111 346 899999999999983 26899999999999999884 54432111222
Q ss_pred CC----CCCCCccceEEcCCCCCCCCCCCCCcccchhhhhhhccccceeEE--EEE-e---CCCCeeEEEeecchhhhhc
Q 041358 125 FN----FVEPSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWV--LTD-T---CHKKRAWFVHCHLDHHQSW 194 (226)
Q Consensus 125 ~n----~~~p~~rDtv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ir-~---adnpG~W~~HCHi~~H~~~ 194 (226)
++ ..++.|||||.|+++ +|+ ++| + +||| |+||||+++|++.
T Consensus 389 ~~~~~~p~~~~~rDTv~v~pg---------------------------~~~~i~vrF~~~~adnp--w~~HCHil~H~d~ 439 (448)
T 3aw5_A 389 DNRGRLPTDLGLKDTVLIWPG---------------------------ETVKIVVNFDAKKRGQL--FPFHCHNLEHEDG 439 (448)
T ss_dssp STTCCCGGGGSCBSEEEECTT---------------------------CEEEEEEEECGGGTTCE--EEEEESSHHHHHT
T ss_pred cccCCCccccCCccEEEeCCC---------------------------CEEEEEEEecccCCCCc--EEEEcCChHHHhC
Confidence 22 234579999999999 555 666 7 9999 9999999999999
Q ss_pred cceeEEEEE
Q 041358 195 AMQMAFIVK 203 (226)
Q Consensus 195 Gm~~~~~v~ 203 (226)
|||+.|+|.
T Consensus 440 GMm~~~~V~ 448 (448)
T 3aw5_A 440 GMMINIAVK 448 (448)
T ss_dssp TCEEEEEEC
T ss_pred CCceEEEeC
Confidence 999999873
No 13
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.97 E-value=6.3e-31 Score=246.28 Aligned_cols=162 Identities=10% Similarity=0.080 Sum_probs=116.2
Q ss_pred CEEeccCceEEEEEEeCCCCCeeEEEEEeccCCCcc------CCCCCceEEEEEecCCCCC--C----CC---CCCCCCC
Q 041358 1 YLTISPGQIIDVLIKANQIPNKYYMSAKAHSSATDV------YDDNTTTTAIVQYEGLYPS--S----KT---PLPNLPS 65 (226)
Q Consensus 1 ~l~I~pGQRydVLV~a~~~pg~Y~ira~~~~~~~~~------~~~~~~~~AILrY~g~~p~--~----~~---~lP~~p~ 65 (226)
.|.|+|||||||||++++ +++|||++.....+.+. ........++++|.+.... . +. +++.++.
T Consensus 243 ~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~p~~L~~~~~~~~ 321 (451)
T 2uxt_A 243 QLSLAPGERREILVDMSN-GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRLLPTEIMAG 321 (451)
T ss_dssp SEEECTTCEEEEEEECTT-CCCEEEEC----------------CCCCSCCEEEEEEECSCCC----CCCSCSSSSCCCCC
T ss_pred eEEECceeEEEEEEEeCC-CCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCccccCccccCCCCCCCC
Confidence 478999999999999986 68999998765432210 0122344688888654211 0 11 1111111
Q ss_pred ---------------CCCCcce----EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCC
Q 041358 66 ---------------YDDTKAS----VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFN 126 (226)
Q Consensus 66 ---------------~~d~~~~----~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n 126 (226)
.|...|. .+.++.|++++|+|+|. ..||||||||+|+|++++ | ..++
T Consensus 322 ~~~~~~~~~l~~~~~iNg~~f~~~~~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl~~~-G--------~~~~ 387 (451)
T 2uxt_A 322 SPIRSRDISLGDDPGINGQLWDVNRIDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIRNVN-G--------AMPF 387 (451)
T ss_dssp CCSEEEEEEECSSSSBTTBCCCTTCCCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEEEET-T--------BCCC
T ss_pred CCcceEEEEEeeEEEECCEeCCCCCCcEEcCCCCEEEEEEECC-----CCcCeEECCceEEEEeeC-C--------cCCC
Confidence 1111221 47889999999999996 589999999999999885 3 1245
Q ss_pred CCCCCccceEEcCCCCCCCCCCCCCcccchhhhhhhccccceeEEEEE-eCCCCee----EEEeecchhhhhccceeEEE
Q 041358 127 FVEPSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTD-TCHKKRA----WFVHCHLDHHQSWAMQMAFI 201 (226)
Q Consensus 127 ~~~p~~rDtv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir-~adnpG~----W~~HCHi~~H~~~Gm~~~~~ 201 (226)
+.+|.|||||.| + +++.|+ ++||||. ||||||+++|++.|||+.|+
T Consensus 388 ~~~p~~rDTv~v--g---------------------------~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~ 438 (451)
T 2uxt_A 388 PEDRGWKDTVWV--D---------------------------GQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLL 438 (451)
T ss_dssp GGGSSCBSEEEE--E---------------------------EEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEE
T ss_pred cccCCCccEEEE--C---------------------------CEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEE
Confidence 567999999999 7 889999 9999988 99999999999999999999
Q ss_pred EEcCc
Q 041358 202 VKNDR 206 (226)
Q Consensus 202 v~~~~ 206 (226)
|.+..
T Consensus 439 v~~~~ 443 (451)
T 2uxt_A 439 VNPVP 443 (451)
T ss_dssp EECSC
T ss_pred EccCc
Confidence 98654
No 14
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.97 E-value=4.8e-30 Score=243.65 Aligned_cols=168 Identities=15% Similarity=0.248 Sum_probs=114.1
Q ss_pred EEeccCceEEEEEEeCCCCCeeEEEEEeccCCCccCCCCCceEEEEEecCCCCC---CCCCCC----C---CCCC-----
Q 041358 2 LTISPGQIIDVLIKANQIPNKYYMSAKAHSSATDVYDDNTTTTAIVQYEGLYPS---SKTPLP----N---LPSY----- 66 (226)
Q Consensus 2 l~I~pGQRydVLV~a~~~pg~Y~ira~~~~~~~~~~~~~~~~~AILrY~g~~p~---~~~~lP----~---~p~~----- 66 (226)
|.|++||||||||++++.+|++ +++.....+.. ........+|++|..+.+. ....+| . +|..
T Consensus 292 l~l~pgeR~dvlv~~~~~~g~~-~~l~~~~~~~~-~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~ 369 (513)
T 2wsd_A 292 FSLAPAERYDIIIDFTAYEGES-IILANSAGCGG-DVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNI 369 (513)
T ss_dssp EEECTTCEEEEEEECGGGTTCE-EEEEECCCSSS-SCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEE
T ss_pred EEECCeeeEEEEEECCCCCCcE-EEEEecccccc-cCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcce
Confidence 7899999999999999877764 33333222211 1112244578888654211 011111 1 1100
Q ss_pred -------------------CCCcc---eEEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCC---CCCCccc
Q 041358 67 -------------------DDTKA---SVKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFG---NFDRAKD 121 (226)
Q Consensus 67 -------------------~d~~~---~~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g---~~~~~~~ 121 (226)
|...| ..+.++.|++++|+|+|. +...||||||||+|+|++++.+ .|+..
T Consensus 370 ~~~~l~~~~~~~g~~~~~iNg~~~~~~~~~~~~~g~~~~w~l~N~---~~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~-- 444 (513)
T 2wsd_A 370 RTLKLAGTQDEYGRPVLLLNNKRWHDPVTETPKVGTTEIWSIINP---TRGTHPIHLHLVSFRVLDRRPFDIARYQES-- 444 (513)
T ss_dssp EEEEEEEEECTTSCEEEEETTBCTTSCCCBCCBTTCEEEEEEEEC---SSSCEEEEESSCCEEEEEEEEBCHHHHHHH--
T ss_pred EEEEEEeecCCCCCceEeECCccCCCcccEecCCCCEEEEEEEcC---CCCCcCEeEeCceEEEEEecCccccccccc--
Confidence 00111 134678999999999998 4789999999999999987631 22221
Q ss_pred cccCCCC---------CCCccceEEcCCCCCCCCCCCCCcccchhhhhhhccccceeEEEEE-eC-CCCeeEEEeecchh
Q 041358 122 AKRFNFV---------EPSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTD-TC-HKKRAWFVHCHLDH 190 (226)
Q Consensus 122 ~~~~n~~---------~p~~rDtv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir-~a-dnpG~W~~HCHi~~ 190 (226)
..+|+. ++.|||||.|+++ +|+.|+ ++ ||||.|+||||+++
T Consensus 445 -~~~~~~~~~~~~~~~~~~~rDTv~v~pg---------------------------~~~~i~~~f~dnpG~w~~HCHil~ 496 (513)
T 2wsd_A 445 -GELSYTGPAVPPPPSEKGWKDTIQAHAG---------------------------EVLRIAATFGPYSGRYVWHCHALE 496 (513)
T ss_dssp -CCCCBSSCCBCCCGGGSSCBSEEEECTT---------------------------EEEEEEEECCSCCEEEEEEESCHH
T ss_pred -ccccccCCCCCCCccccCcccEEEeCCC---------------------------CEEEEEEEecCCCCCEEEEcCChh
Confidence 112332 3459999999999 888777 66 89999999999999
Q ss_pred hhhccceeEEEEEc
Q 041358 191 HQSWAMQMAFIVKN 204 (226)
Q Consensus 191 H~~~Gm~~~~~v~~ 204 (226)
|++.|||+.|.|.+
T Consensus 497 H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 497 HEDYDMMRPMDITD 510 (513)
T ss_dssp HHTTTCEEEEEEBC
T ss_pred hhhcCCceeEEEeC
Confidence 99999999999975
No 15
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.96 E-value=1.1e-27 Score=226.62 Aligned_cols=164 Identities=20% Similarity=0.220 Sum_probs=117.4
Q ss_pred CEEeccCceEEEEEEeCCCCCeeEEEEEeccCCCcc--CCCCCceEEEEEecCCC---CCCCCCCCCCCCCC--------
Q 041358 1 YLTISPGQIIDVLIKANQIPNKYYMSAKAHSSATDV--YDDNTTTTAIVQYEGLY---PSSKTPLPNLPSYD-------- 67 (226)
Q Consensus 1 ~l~I~pGQRydVLV~a~~~pg~Y~ira~~~~~~~~~--~~~~~~~~AILrY~g~~---p~~~~~lP~~p~~~-------- 67 (226)
.|.|+|||||||||++++ ++.|.|++....+.... .......+..+++.+.. |....++|.++...
T Consensus 270 ~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~~~~~~~~~~~r~~~l~ 348 (481)
T 3zx1_A 270 ELFLSPASRVEVLIDAPK-DGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKENVELPKNLKIFKPSEEPKEFKEIIMS 348 (481)
T ss_dssp SEEECTTCEEEEEEECSS-CEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCCCCCCSCSCCCCCCCCCCEEEEEEEE
T ss_pred eEEECCccEEEEEEEcCC-CcEEEEEEecccccCccccCCCCceeEEEEecCCCCccCCccccCCCCCCCCCcEEEEEEe
Confidence 478999999999999986 67899888654432110 11223445556665522 11111222222100
Q ss_pred -CC--------------------cce-----------EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecC-CC
Q 041358 68 -DT--------------------KAS-----------VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGG-FG 114 (226)
Q Consensus 68 -d~--------------------~~~-----------~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g-~g 114 (226)
+. .|. .+.++.|++|+|+|.|. +...|||||||+.|+|++++ .|
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~---~~~~Hp~HlHG~~F~vl~~~~~g 425 (481)
T 3zx1_A 349 EDHMQMHGMMGKSEGELKIALASMFLINRKSYDLKRIDLSSKLGVVEDWIVINK---SHMDHPFHIHGTQFELISSKLNG 425 (481)
T ss_dssp ECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCTTCCCEEEETTCCEEEEEEEC---SSSCEEEEETTCCEEEEEEEETT
T ss_pred ccchhcccccccccccccccccceeEECCEeCCCCCceEEeCCCCEEEEEEEcC---CCCceeEEEeccEEEEEEecccC
Confidence 00 022 57899999999999997 58899999999999999872 12
Q ss_pred CCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCcccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhh
Q 041358 115 NFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQS 193 (226)
Q Consensus 115 ~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~ 193 (226)
. .....++.|||||.|+|| +++.|+ ++||||.|+||||+++|++
T Consensus 426 ~--------~~~~~~~~~kDTv~v~Pg---------------------------~~~~i~~~~d~pG~w~~HCHil~H~d 470 (481)
T 3zx1_A 426 K--------VQKAEFRALRDTINVRPN---------------------------EELRLRMKQDFKGLRMYHCHILEHED 470 (481)
T ss_dssp E--------EEECSSCCEESEEEECTT---------------------------CEEEEEECCCSCEEEEEEESSHHHHH
T ss_pred C--------CCCcccCcccceEEECCC---------------------------CEEEEEEEcCCCeeEEEEcCChHHHh
Confidence 1 111234789999999999 889999 9999999999999999999
Q ss_pred ccceeEEEEE
Q 041358 194 WAMQMAFIVK 203 (226)
Q Consensus 194 ~Gm~~~~~v~ 203 (226)
.|||..|.|.
T Consensus 471 ~GMm~~~~V~ 480 (481)
T 3zx1_A 471 LGMMGNLEVK 480 (481)
T ss_dssp TTCEEEEEEE
T ss_pred cCCceEEEEe
Confidence 9999999986
No 16
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.95 E-value=3.1e-27 Score=229.29 Aligned_cols=104 Identities=23% Similarity=0.262 Sum_probs=85.4
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCC---CCCCccc------------cccCCCCCCCccceEE
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFG---NFDRAKD------------AKRFNFVEPSLQNTIM 137 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g---~~~~~~~------------~~~~n~~~p~~rDtv~ 137 (226)
.+.++.|++|+|+|.|. +...|||||||+.|+|++++.+ .|+...+ ...++..++.|||||.
T Consensus 473 ~~~v~~G~~v~w~l~N~---~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~ 549 (612)
T 2g23_A 473 GFTIGEGTHEQWTFLNL---SPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQ 549 (612)
T ss_dssp CEEEETTCEEEEEEEEC---SSSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEE
T ss_pred ceEecCCCEEEEEEEeC---CCCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEE
Confidence 45788999999999998 5789999999999999986422 1221100 1234555677999999
Q ss_pred cCCCCCCCCCCCCCcccchhhhhhhccccceeEEEEE-eCC-CCeeEEEeecchhhhhccceeEEEEEcCc
Q 041358 138 VPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTD-TCH-KKRAWFVHCHLDHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 138 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir-~ad-npG~W~~HCHi~~H~~~Gm~~~~~v~~~~ 206 (226)
|+|| +++.|+ +++ |||.|+||||+++|++.|||..|+|.+.+
T Consensus 550 v~Pg---------------------------~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~~ 593 (612)
T 2g23_A 550 VPGP---------------------------QGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp ECSS---------------------------EEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEECHH
T ss_pred ECCC---------------------------cEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECchh
Confidence 9999 889999 999 99999999999999999999999998754
No 17
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.93 E-value=3.7e-25 Score=209.74 Aligned_cols=91 Identities=22% Similarity=0.295 Sum_probs=73.7
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++++|.|.|.+ ....|||||||++|+|++++... ....++.|||||.|+ |
T Consensus 393 ~~~~~~G~~e~w~l~N~~--~~~~Hp~HlHg~~F~Vl~~~g~~---------~~~~~~~~kDTV~v~-g----------- 449 (488)
T 3od3_A 393 MFAAAKGQYERWVISGVG--DMMLHPFHIHGTQFRILSENGKP---------PAAHRAGWKDTVKVE-G----------- 449 (488)
T ss_dssp SEECCBSSCEEEEEECTT--CCCCEEEEETTCCBEEEEBTTBC---------CCGGGSSSBSEEEES-S-----------
T ss_pred ceEcCCCCEEEEEEEeCC--CCCCccEEEcCceEEEeccCCCc---------cccccCCceeEEEeC-C-----------
Confidence 367899999999999983 25789999999999999874211 111235799999999 8
Q ss_pred ccchhhhhhhccccceeEEEEE-eC----CCCeeEEEeecchhhhhccceeEEEE
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TC----HKKRAWFVHCHLDHHQSWAMQMAFIV 202 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~a----dnpG~W~~HCHi~~H~~~Gm~~~~~v 202 (226)
+++.|+ ++ +|||.||||||++.|++.|||..|+|
T Consensus 450 ----------------~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 450 ----------------NVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp ----------------SEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred ----------------CEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 556666 54 67889999999999999999999975
No 18
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.88 E-value=2.2e-22 Score=186.57 Aligned_cols=160 Identities=16% Similarity=0.135 Sum_probs=112.9
Q ss_pred EeccCceEEEEEEeCCCCCeeEEEEEeccCCCccCCCCCceEEEEEecCCCCCCCC-----------CCCC---------
Q 041358 3 TISPGQIIDVLIKANQIPNKYYMSAKAHSSATDVYDDNTTTTAIVQYEGLYPSSKT-----------PLPN--------- 62 (226)
Q Consensus 3 ~I~pGQRydVLV~a~~~pg~Y~ira~~~~~~~~~~~~~~~~~AILrY~g~~p~~~~-----------~lP~--------- 62 (226)
.|.|||||++++++++ +|.||+.+........ ......++|.|.+..+.... ..+.
T Consensus 237 ~i~pG~~~~~~~~~~~-~G~~~yh~h~~~~~~~---~~~Gl~g~l~v~~~~~~P~~d~~~~~~~~~~~~~~~~~~~g~~~ 312 (447)
T 2dv6_A 237 QTDPGEETVVTFKALI-PGIYVYHCATPSVPTH---ITNGMYGLLLVEPEGGLPQVDREFYVMQGEIYTVKSFGTSGEQE 312 (447)
T ss_dssp CBCTTCEEEEEEECCS-CEEEEEECCSSSHHHH---HHTTCEEEEEEECTTCSCCCSEEEEEEEEEECBSSCTTCCEECC
T ss_pred EeCCCCEEEEEEECCC-CeEEEEEeCCCChHHH---HhCCCEEEEEEeCCCCCCCCCeeEEEEecccccCCccccccccc
Confidence 5899999999999987 6999999864210000 01123455555443210000 0000
Q ss_pred ---------CCC---CCCCcc-----eEEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccC
Q 041358 63 ---------LPS---YDDTKA-----SVKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRF 125 (226)
Q Consensus 63 ---------~p~---~~d~~~-----~~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~ 125 (226)
.+. .|...+ .++.++.|++++|+|.|.+ ....||||||||+|+|++.+ |.+
T Consensus 313 ~~~~~~~~~~~~~~~iNG~~~~~~~~~~~~v~~g~~vrlrliN~~--~~~~h~~hlhGh~f~vv~~d-G~~--------- 380 (447)
T 2dv6_A 313 MDYEKLINEKPEYFLFNGSVGSLTRSHPLYASVGETVRIFFGVGG--PNFTSSFHVIGEIFDHVYSL-GSV--------- 380 (447)
T ss_dssp BBHHHHHTTCCSEEEETTSTTCCCCCCCEEECTTCEEEEEEEEEE--SSCCEEEEEETCCEEEECGG-GCS---------
T ss_pred CChHHhhccCCCEEEECCcccCCCCCcceEECCCCEEEEEEEeCC--CCceEeEEEcCcEEEEEEcC-Ccc---------
Confidence 000 011111 2588999999999999985 35789999999999999875 321
Q ss_pred CCCCCC-ccceEEcCCCCCCCCCCCCCcccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 126 NFVEPS-LQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 126 n~~~p~-~rDtv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
...|. +|||+.|++| +++.|+ +++|||.|+||||+.+|.+.||++.|.|.
T Consensus 381 -~~~p~~~~dtv~l~pg---------------------------~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~ 432 (447)
T 2dv6_A 381 -VSPPLIGVQTVSVPPG---------------------------GATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVD 432 (447)
T ss_dssp -SSCCEEEESEEEECTT---------------------------EEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEEC
T ss_pred -cCCCcccccEEEECCC---------------------------cEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEe
Confidence 12344 6999999999 899999 99999999999999999999999999997
Q ss_pred cCc
Q 041358 204 NDR 206 (226)
Q Consensus 204 ~~~ 206 (226)
...
T Consensus 433 ~~~ 435 (447)
T 2dv6_A 433 GPK 435 (447)
T ss_dssp SCS
T ss_pred CCC
Confidence 543
No 19
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.85 E-value=6.4e-21 Score=172.94 Aligned_cols=95 Identities=20% Similarity=0.222 Sum_probs=78.9
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|+|.|.+ ...||||||||.|++++.| .++.. ...+.++||+.|.||
T Consensus 210 ~l~v~~Ge~vri~l~N~g---~~~HpfHlHGh~f~v~~~G--~~~~p-------~~~~~~~Dtv~v~PG----------- 266 (343)
T 3cg8_A 210 DFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRTG--ILTGP-------DDPSRVIDNKITGPA----------- 266 (343)
T ss_dssp CEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSSS--SCCST-------TCCCCEESEEEECTT-----------
T ss_pred cEEeCCCCEEEEEEEcCC---ccccccEecCcEEEEeccC--cccCC-------CCcccceeeEEeCCC-----------
Confidence 689999999999999984 6899999999999997543 32211 123578999999999
Q ss_pred ccchhhhhhhccccceeEEEEE-e---CCCCeeEEEeecchhhhhccceeEEEEEcCc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-T---CHKKRAWFVHCHLDHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~---adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~ 206 (226)
+++.++ . ++|||.|+||||+.+|++.||+..|+|.+.+
T Consensus 267 ----------------~~~~v~~~~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~ 308 (343)
T 3cg8_A 267 ----------------DSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 308 (343)
T ss_dssp ----------------CEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred ----------------CEEEEEEEECCCCCCeeEEEeCCCHHHHhccCcEEEEEecCC
Confidence 556677 6 5899999999999999999999999998643
No 20
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.84 E-value=5.8e-21 Score=170.19 Aligned_cols=98 Identities=20% Similarity=0.333 Sum_probs=82.2
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|+|.|.+ ...||||||||.|+++..+... .....+.++||+.|.||+
T Consensus 191 ~l~v~~Ge~Vr~~liN~~---~~~HpfHlHGh~F~v~~~g~~~---------~~~~~~~~~Dtv~v~PGe---------- 248 (299)
T 3t9w_A 191 TFEANLGERVEWIAIGHG---SNFHTFHLHGHRWLDNRTGMRT---------SEYDPSPLIDIKDLNPGV---------- 248 (299)
T ss_dssp EEEEETTCEEEEEEEEES---SCCCEEEETTCCEESSSSSSCC---------STTCCCCEESEEECCTTC----------
T ss_pred cceecCCCEEEEEEEecc---ccceeeeEecceEEEEeccccc---------CCcCCCCceeeEEeCCce----------
Confidence 788999999999999984 6789999999999998775321 122345689999999993
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEEcCc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~ 206 (226)
..++.+++ .++|||.|+||||+++|++.||+..|.|++.+
T Consensus 249 --------------~~~~~via~~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 249 --------------SFGFQVIAGEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp --------------EEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred --------------eEEEEEEEeeCCCCeeEEEEcCCHHHHhcCCeEEEEEECCC
Confidence 12677788 89999999999999999999999999998754
No 21
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.84 E-value=8.6e-21 Score=169.82 Aligned_cols=99 Identities=19% Similarity=0.213 Sum_probs=81.2
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|+|.|.+ ...||||||||.|++++.+... .....+.++||+.|.|++
T Consensus 175 ~l~v~~Ge~vr~~liN~g---~~~hpfHlHGh~F~v~~~~~~~---------~~~~~~~~~Dtv~l~Pge---------- 232 (313)
T 3tas_A 175 DFEATVGDRVEFVMITHG---EYYHTFHLHGHRWADNRTGMLT---------GPDDPSQVIDNKICGPAD---------- 232 (313)
T ss_dssp CEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSTTSSCC---------STTCCCCEESEEEECTTC----------
T ss_pred ccccccCCEEEEEEeccc---ccceeeeecCCeeEEEEECCcc---------CCCCCCeeeeEEEeCCCc----------
Confidence 688999999999999984 6789999999999999775321 112347899999999993
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEEcCcc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKNDRC 207 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~~ 207 (226)
+ ..+.+++ .++|||.|+||||+++|++.||+..|.|++.+.
T Consensus 233 -----r---------~~v~v~a~~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~ 274 (313)
T 3tas_A 233 -----S---------FGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 274 (313)
T ss_dssp -----E---------EEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTC
T ss_pred -----c---------eEEEEEeccCCCCEeEEEEeCChHHHHCCCeEEEEEECCCC
Confidence 1 1444555 788999999999999999999999999987553
No 22
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.82 E-value=3.3e-20 Score=163.22 Aligned_cols=95 Identities=20% Similarity=0.233 Sum_probs=78.3
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|+|+|.+ ...||||+||+.|++++.| .++.. ...+.++||+.|.||
T Consensus 169 ~i~v~~G~~vri~l~N~~---~~~Hp~HlHG~~f~v~~~G--~~~~p-------~~~~~~~Dtv~v~pg----------- 225 (276)
T 3kw8_A 169 DFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRTG--ILTGP-------DDPSRVIDNKITGPA----------- 225 (276)
T ss_dssp CEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSSS--SCCST-------TCCCCEESEEEECTT-----------
T ss_pred CEEEecCCEEEEEEecCC---CcceeEEEccceeEEeccC--ccCCC-------cccccCCccEEeCCC-----------
Confidence 689999999999999984 5799999999999998654 22211 123568999999999
Q ss_pred ccchhhhhhhccccceeEEEEE-eCC---CCeeEEEeecchhhhhccceeEEEEEcCc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCH---KKRAWFVHCHLDHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~ad---npG~W~~HCHi~~H~~~Gm~~~~~v~~~~ 206 (226)
+++.++ .++ |||.|+||||+.+|++.||+..|+|.+.+
T Consensus 226 ----------------~~~~~~~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~ 267 (276)
T 3kw8_A 226 ----------------DSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 267 (276)
T ss_dssp ----------------CEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred ----------------ceEEEEEEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCCC
Confidence 445555 555 89999999999999999999999998764
No 23
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.82 E-value=6.4e-20 Score=162.26 Aligned_cols=159 Identities=14% Similarity=0.087 Sum_probs=106.8
Q ss_pred EeccCceEEEEEEeCCCCCeeEEEEEeccCCCccCCCCCceEEEEEecCCCCCCCC--------------CCCCCCCCCC
Q 041358 3 TISPGQIIDVLIKANQIPNKYYMSAKAHSSATDVYDDNTTTTAIVQYEGLYPSSKT--------------PLPNLPSYDD 68 (226)
Q Consensus 3 ~I~pGQRydVLV~a~~~pg~Y~ira~~~~~~~~~~~~~~~~~AILrY~g~~p~~~~--------------~lP~~p~~~d 68 (226)
.|.||++++.-++++ .+|.||.-.......... .....+.-||+-.+..+.... ..+..-.+|.
T Consensus 110 ~i~PG~~~~y~f~~~-~~Gt~~yH~H~~~~~~~~-~~Gl~G~liV~~~~~~~~~d~e~~l~~~d~~~~~g~~~~~~~iNG 187 (288)
T 3gdc_A 110 SIAPGQSFTYEFDAT-PFGTHLYHCHQSPLAPHI-AKGLYGGFIVEPKEGRPPADDEMVMVMNGYNTDGGDDNEFYSVNG 187 (288)
T ss_dssp SBCTTCEEEEEEECC-SCEEEEEECCCSSHHHHH-HTTCEEEEEEECSSCCCCCSEEEEEEEEEECCSSTTCCSEEEETT
T ss_pred eECCCCEEEEEEEcC-CCccEEEEecCcchHHHH-hCcCeEEEEEeCCccCCCCcceEEEEEeeEecCCCCCcceEEECc
Confidence 588999999999995 479999776543100000 011233333322211110000 0000000121
Q ss_pred Ccc----eEEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCC
Q 041358 69 TKA----SVKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNG 144 (226)
Q Consensus 69 ~~~----~~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~ 144 (226)
..+ ..+.++.|++|+|+|.|.+. ....||||+||+.|++++.|.. ...|.++||+.|+||
T Consensus 188 ~~~~~~~~~l~v~~Ge~vr~~l~N~g~-~~~~H~fHlhG~~f~v~~~g~~------------~~~~~~~Dtv~v~pg--- 251 (288)
T 3gdc_A 188 LPFHFMDFPVKVKQHELVRIHLINVLE-YDPINSFHIHGNFFHYYPTGTM------------LTPSEYTDTISQVQG--- 251 (288)
T ss_dssp STTHHHHSCEEEETTCCEEEEEEECCC-SSSEEEEEETTCCEEEEETTCC------------SSCSEEESEEEEETT---
T ss_pred ccccccCcccccCCCCEEEEEEEeCCC-CCcceeEEEcCCEEEEEcCCCc------------cCCCceeeEEEeCCC---
Confidence 112 26789999999999999841 1236999999999999976521 234689999999999
Q ss_pred CCCCCCCcccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 145 PKTFKCPKITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
++..++ ++++||.|+||||+.+|++.||+..|.|.
T Consensus 252 ------------------------~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~ 287 (288)
T 3gdc_A 252 ------------------------QRGILELRFPYPGKFMFHAHKTEFAELGWMGFFEVS 287 (288)
T ss_dssp ------------------------CEEEEEECCCSCEEEEEECSSHHHHTTTCEEEEEEE
T ss_pred ------------------------ceEEEEEECCCCEEEEEEecChHHHhcCCCEEEEEe
Confidence 678888 99999999999999999999999999986
No 24
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.80 E-value=1.5e-19 Score=163.21 Aligned_cols=91 Identities=21% Similarity=0.262 Sum_probs=77.7
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
++.++.|++|+|+|.|.+ ...||||||||.|+|++.+ |. +..+|.++||+.|++|
T Consensus 180 ~~~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~D-G~----------~~~~p~~~dtv~l~pg----------- 234 (339)
T 2zwn_A 180 PLRVKKGDVVKIRFFGAG---GGIHAMHSHGHDMLVTHKD-GL----------PLDSPYYADTVLVSPG----------- 234 (339)
T ss_dssp CEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEET-TE----------EEEEEEEESEEEECTT-----------
T ss_pred cEEECCCCEEEEEEEeCC---CceEEEEECCcEEEEEEeC-Ce----------ecCCCcEEEEEEECCC-----------
Confidence 578999999999999984 5699999999999999874 21 1123778999999999
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhh------hhccceeEEEEEc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHH------QSWAMQMAFIVKN 204 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H------~~~Gm~~~~~v~~ 204 (226)
+++.|+ +++|||.|+||||+.+| ...||+..|.+..
T Consensus 235 ----------------~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g 277 (339)
T 2zwn_A 235 ----------------ERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDG 277 (339)
T ss_dssp ----------------CEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETT
T ss_pred ----------------CEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECC
Confidence 667888 99999999999999999 6789988887754
No 25
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.79 E-value=1.5e-19 Score=184.62 Aligned_cols=91 Identities=18% Similarity=0.280 Sum_probs=80.5
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|+|.|.+. ....||||||||.|++++.| |.+|||+.|+||
T Consensus 971 ~~~v~~G~~vr~~l~N~g~-~~~~HpfHlHG~~F~vv~~~-----------------p~~~DTv~v~pg----------- 1021 (1065)
T 2j5w_A 971 GLTMHVGDEVNWYLMGMGN-EIDLHTVHFHGHSFQYKHRG-----------------VYSSDVFDIFPG----------- 1021 (1065)
T ss_dssp CCEEETTCEEEEEEEECCS-TTCCEEEEESSCCEEETTTT-----------------CEEESEEEECTT-----------
T ss_pred cEEeCCCCEEEEEEEeCCC-CCcceeEEEcccEEEEEecC-----------------CceeeEEEECCC-----------
Confidence 5789999999999999742 25689999999999999653 678999999999
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEEcCccc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKNDRCA 208 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~~~ 208 (226)
+++.|+ ++||||.|+||||+++|++.||++.|.|.+....
T Consensus 1022 ----------------~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~~~ 1062 (1065)
T 2j5w_A 1022 ----------------TYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNEDT 1062 (1065)
T ss_dssp ----------------CEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC--
T ss_pred ----------------CeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCccc
Confidence 889999 9999999999999999999999999999876543
No 26
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.76 E-value=9.2e-19 Score=157.17 Aligned_cols=91 Identities=13% Similarity=0.180 Sum_probs=77.7
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|+|.|.+ ...||||||||.|+|++...+ .+.+|.++||+.|.||
T Consensus 179 ~l~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~dG~-----------~~~~p~~~dtv~l~pg----------- 233 (318)
T 3g5w_A 179 PIRVKKGDVIRLRLIGAG---DHVHAIHTHGHISQIAFKDGF-----------PLDKPIKGDTVLIGPG----------- 233 (318)
T ss_dssp CEEECTTCEEEEEEEECS---SSCEEEEETTSCEEEEEETTE-----------EEEEEEEESEEEECTT-----------
T ss_pred cEEeCCCCEEEEEEEeCC---CceEEEEECCcEEEEEecCCc-----------ccCCCccccEEEECCC-----------
Confidence 588999999999999984 568999999999999987421 1124789999999999
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhh------ccceeEEEEEc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQS------WAMQMAFIVKN 204 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~------~Gm~~~~~v~~ 204 (226)
+++.|+ +++|||.|+||||+++|++ .||+..|.+..
T Consensus 234 ----------------er~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g 276 (318)
T 3g5w_A 234 ----------------ERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEE 276 (318)
T ss_dssp ----------------CEEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETT
T ss_pred ----------------CEEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECC
Confidence 778888 9999999999999999998 57888888754
No 27
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.66 E-value=2.1e-16 Score=153.38 Aligned_cols=91 Identities=14% Similarity=0.200 Sum_probs=79.4
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|+|.|.+. ....||||+|||.|++++.+ +.++|++.|.||
T Consensus 240 ~l~v~~G~~vrlrliN~~~-~~~~h~~hlhG~~f~vi~~d-----------------~~~~d~v~l~pg----------- 290 (647)
T 1sdd_B 240 GLRMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGTQ-----------------QHQLGVWPLLPG----------- 290 (647)
T ss_dssp CCEEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSSS-----------------CEEESSEEECTT-----------
T ss_pred CeEEcCCCEEEEEEEeCCC-CCcceeEEEcCcEEEEecCC-----------------CcccceEEECCC-----------
Confidence 5788999999999999851 13489999999999998542 458899999999
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEEcCccc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKNDRCA 208 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~~~ 208 (226)
+++.++ ++++||.|+||||+.+|+..||+..|+|.+..|.
T Consensus 291 ----------------~r~~v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~~~c~ 331 (647)
T 1sdd_B 291 ----------------SFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLIVDRECK 331 (647)
T ss_dssp ----------------EEEEEEEECCSSEEEEEECCCHHHHTTTCEEEEEEECTTCC
T ss_pred ----------------eEEEEEEEeccceEeecccCcccccccccccceeeeccccc
Confidence 778888 9999999999999999999999999999876664
No 28
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.62 E-value=6.7e-17 Score=160.38 Aligned_cols=90 Identities=17% Similarity=0.249 Sum_probs=77.5
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|+|.|.+. ....||||||||.|+|++.+ +.++||+.|.||
T Consensus 369 ~l~v~~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d-----------------g~~~Dtv~l~Pg----------- 419 (770)
T 2r7e_B 369 GLVMAQDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE-----------------EYKMALYNLYPG----------- 419 (770)
T ss_dssp CCCCCSSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS-----------------CCEESEEECCTT-----------
T ss_pred CeEEeCCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC-----------------CceeeEEEECCC-----------
Confidence 5778999999999999851 13489999999999998653 238899999999
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEEcCcc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKNDRC 207 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~~ 207 (226)
+++.|+ .+++||.|+||||+.+|++.||+..|.|...+|
T Consensus 420 ----------------~~~~v~~~ad~pG~w~~hcH~~~H~~~GM~~~~~V~s~~C 459 (770)
T 2r7e_B 420 ----------------VFETVEMLPSKAGIWRVECLIGEHLHAGMSTLFLVYSNKC 459 (770)
T ss_dssp ----------------CCCEEEECCSSCBCCCBCCCSHHHHTTBCCCCCCBCCSSC
T ss_pred ----------------eEEEEEEEeCCCCceEEEeccccccccccccccccccccc
Confidence 667888 999999999999999999999999999865455
No 29
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.60 E-value=7.4e-17 Score=143.70 Aligned_cols=84 Identities=13% Similarity=0.126 Sum_probs=55.8
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|+|.|.+. ....|+||+|||.|.+ . | ..+||+.|.||
T Consensus 216 ~l~v~~G~~vrlrliN~g~-~~~~h~~hlhG~~~~~--d--G----------------~~~dtv~l~pg----------- 263 (306)
T 1sdd_A 216 DITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQ--N--H----------------HKISAITLVSA----------- 263 (306)
T ss_dssp CCCCCCC------BBCCCS-SSCEECCBCSSTTCEE--T--T----------------EECSCCCEETT-----------
T ss_pred ceEEcCCCEEEEEEEeCCC-CCccEEEEECCcEeee--C--C----------------EEcceEEECCC-----------
Confidence 5678899999999999852 1257999999999976 1 1 35799999999
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEEc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKN 204 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~ 204 (226)
+.+.+. .+++||.|+||||+.+|++.||+..|.|.+
T Consensus 264 ----------------er~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~ 300 (306)
T 1sdd_A 264 ----------------TSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKN 300 (306)
T ss_dssp ----------------CCBC--------CCCCCBCCSTTTGGGTCBCCC----
T ss_pred ----------------cEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEec
Confidence 446777 899999999999999999999999999875
No 30
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.51 E-value=7.1e-16 Score=152.47 Aligned_cols=84 Identities=11% Similarity=0.113 Sum_probs=72.0
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|+|.|.+. ....||||+|||.|.++ +.++||+.|.||
T Consensus 627 ~l~v~~Ge~vr~rliN~g~-~~~~h~~HlhGh~f~v~--------------------~~~~Dtv~l~Pg----------- 674 (742)
T 2r7e_A 627 QLSVCLHEVAYWYILSIGA-QTDFLSVFFSGYTFKHK--------------------MVYEDTLTLFPF----------- 674 (742)
T ss_dssp CCCCCSSCCCEEEEEECSS-CCCCCCCEESSSCCCCB--------------------SSSBCSSCCCCC-----------
T ss_pred cEEEeCCCEEEEEEEeCCC-CcceEEEEEcCcEEEEe--------------------ccceeEEEECCC-----------
Confidence 3678999999999999742 13569999999999986 247899999999
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEEc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKN 204 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~ 204 (226)
+.+.+. .+|+||.|+||||+.+|++.||+..|.|..
T Consensus 675 ----------------~~~~v~~~ad~pG~w~~hcH~~~H~~~GM~~~~~V~~ 711 (742)
T 2r7e_A 675 ----------------SGETVFMSMENPGLWILGCHNSDFRNRGMTALLKVSS 711 (742)
T ss_dssp ----------------SSEECCEECCCCCCSCCEECCCSTTHHHHSCCCCCCC
T ss_pred ----------------cEEEEEEEcCCCeEEEEEeCCchHHhCCCeEEEEEEe
Confidence 335666 899999999999999999999999999874
No 31
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.51 E-value=2.6e-15 Score=148.45 Aligned_cols=83 Identities=17% Similarity=0.221 Sum_probs=72.8
Q ss_pred EEEeecCCEEEEEEEcCCCCCC-cCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCC
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAG-TDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCP 151 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~-~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~ 151 (226)
.+.++.|++|+|+|.|.+ .. ..||||+|||.|+|++ .++||+.|.|+
T Consensus 245 ~l~v~~Ge~vrlrliN~g--~~~~~h~~hlhGh~f~Vvg--------------------~~~Dtv~v~Pg---------- 292 (742)
T 2r7e_A 245 GLIGCHRKSVYWHVIGMG--TTPEVHSIFLEGHTFLVRN--------------------HRQASLEISPI---------- 292 (742)
T ss_dssp CCEECSSSCEEEECCCCC--SSSCCCCCCCTTCCCEETT--------------------EECCSCCCCTT----------
T ss_pred ceEEcCCCEEEEEEEeCC--CCCcceEEEECCCEEEEEe--------------------EecceEEeCCC----------
Confidence 578999999999999985 22 3799999999999972 14799999999
Q ss_pred cccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEEc
Q 041358 152 KITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKN 204 (226)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~ 204 (226)
+.+.++ ++++||.|+||||+.+|+..||+..|.|..
T Consensus 293 -----------------~~~~v~~~~~~pG~w~~hCH~~~H~~~GM~~~~~V~~ 329 (742)
T 2r7e_A 293 -----------------TFLTAQTLLMDLGQFLLFCHISSHQHDGMEAYVKVDS 329 (742)
T ss_dssp -----------------CCCEEEECCCSCSEECCCCCSSSSSTTSCCBCEEECC
T ss_pred -----------------cEEEEEEEeCCCeeEEEEeCChhHHhCCCeEEEEEec
Confidence 557888 999999999999999999999999999974
No 32
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.41 E-value=4.4e-13 Score=120.30 Aligned_cols=92 Identities=11% Similarity=0.033 Sum_probs=78.1
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++++|+|.|.+ ....|+||+|||.|++++...+. .+|..+|++.|.+|
T Consensus 215 ~l~v~~G~~vRlRliN~~--~~~~~~~~l~Gh~f~vi~~DG~~------------~~p~~~d~l~l~pG----------- 269 (327)
T 1kbv_A 215 ALKAKAGETVRMYVGNGG--PNLVSSFHVIGEIFDKVYVEGGK------------LINENVQSTIVPAG----------- 269 (327)
T ss_dssp CEEEETTEEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGSS------------CEECSBSEEEECTT-----------
T ss_pred eEEeCCCCEEEEEEECCC--CCCceeEEEeCCEEEEEEcCCCc------------CCCCceeEEEECCC-----------
Confidence 578999999999999985 35789999999999999875221 22678999999999
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhh-hccceeEEEEEcC
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQ-SWAMQMAFIVKND 205 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~-~~Gm~~~~~v~~~ 205 (226)
+.+.+. ++++||.|++|||..+|. ..||...|.+...
T Consensus 270 ----------------er~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~ 308 (327)
T 1kbv_A 270 ----------------GSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGA 308 (327)
T ss_dssp ----------------EEEEEEEEECSCEEEEEEESSTHHHHHSSCEEEEEEESC
T ss_pred ----------------CEEEEEEEeCCCeEEEEEeccccccccCCcEEEEEECCC
Confidence 667777 889999999999999995 8899999988753
No 33
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.38 E-value=2.5e-12 Score=115.37 Aligned_cols=92 Identities=17% Similarity=0.130 Sum_probs=74.2
Q ss_pred eEEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCC-ccceEEcCCCCCCCCCCCC
Q 041358 72 SVKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPS-LQNTIMVPKNVNGPKTFKC 150 (226)
Q Consensus 72 ~~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~-~rDtv~v~~~~~~~~~~~~ 150 (226)
..+.++.|++++|++.|. +...|++|+|||.|+|+..| .+ ...|. ..||+.|.+|
T Consensus 231 ~~l~v~~G~r~Rl~n~~~---~~~~~~~~i~gh~~~Vi~dG--~~----------~~~p~~~~dtv~l~pG--------- 286 (340)
T 2bw4_A 231 HALTAAVGERVLVVHSQA---NRDTRPHLIGGHGDYVWATG--KF----------RNPPDLDQETWLIPGG--------- 286 (340)
T ss_dssp GCEEEETTCEEEEEEEES---SSCBCEEEETCCEEEEETTC--CT----------TSCCEEEESCCCBCTT---------
T ss_pred CceEcCCCCEEEEEECCC---CCccceEEecCcceEEeCCC--cc----------cCCccccceEEEeCCC---------
Confidence 468899999999887776 46778999999999999643 21 11232 4799999999
Q ss_pred CcccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecch-hhhhccceeEEEEEcC
Q 041358 151 PKITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLD-HHQSWAMQMAFIVKND 205 (226)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~-~H~~~Gm~~~~~v~~~ 205 (226)
+.+.|. .+++||.|+||||.. +|+..||+..|.|...
T Consensus 287 ------------------er~~v~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~ 325 (340)
T 2bw4_A 287 ------------------TAGAAFYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGE 325 (340)
T ss_dssp ------------------EEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESC
T ss_pred ------------------ceEEEEEECCCCeeeEEEcCchHHHHhCCCEEEEEECCC
Confidence 556777 899999999999999 5999999999999753
No 34
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.28 E-value=2e-11 Score=109.26 Aligned_cols=91 Identities=12% Similarity=0.035 Sum_probs=70.5
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCC-ccceEEcCCCCCCCCCCCCC
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPS-LQNTIMVPKNVNGPKTFKCP 151 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~-~rDtv~v~~~~~~~~~~~~~ 151 (226)
.+.++.|++++|++.|. +...+++++|||.|.|++. |.+ ...|. ++||+.|.+|
T Consensus 226 ~l~v~~Ger~Rl~n~~~---~~~~~~h~i~~h~~~Vi~d--G~~----------~~~p~~~~dtv~l~pG---------- 280 (333)
T 1mzy_A 226 ALKAKVGDNVLFVHSQP---NRDSRPHLIGGHGDLVWET--GKF----------HNAPERDLETWFIRGG---------- 280 (333)
T ss_dssp CEEEETTCEEEEEEEES---SSCBCEEEETCCEEEEETT--CCT----------TSCCEEEESBCCBCTT----------
T ss_pred ceEecCCCEEEEEECCC---CCccccEEECCCCeEEEeC--Ccc----------cCCCccCcceEEECCC----------
Confidence 58899999999987775 2344455577899999874 321 11132 5899999999
Q ss_pred cccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhh-hccceeEEEEEcC
Q 041358 152 KITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQ-SWAMQMAFIVKND 205 (226)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~-~~Gm~~~~~v~~~ 205 (226)
+.+.+. .+++||.|+||||+..|. +.||+..|.|...
T Consensus 281 -----------------er~~v~v~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 281 -----------------TAGAALYKFLQPGVYAYVNHNLIEAVHKGATAHVLVEGE 319 (333)
T ss_dssp -----------------EEEEEEEECCSCEEEEEEESSHHHHHTTCCEEEEEEESC
T ss_pred -----------------ceEEEEEEcCCCEEEEEecChhhhHhhCCCEEEEEEcCC
Confidence 556777 899999999999999997 9999999999753
No 35
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.16 E-value=8.4e-11 Score=120.19 Aligned_cols=85 Identities=15% Similarity=0.141 Sum_probs=72.2
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++++|+|.|.+. ....|+||+|||.|++ +|.++|++.|.+|
T Consensus 272 ~l~v~~Ge~vRlRliNag~-~~~~~~~~i~Gh~f~v--------------------~p~~~dtv~I~pG----------- 319 (1065)
T 2j5w_A 272 GLSMCAEDRVKWYLFGMGN-EVDVHAAFFHGQALTN--------------------KNYRIDTINLFPA----------- 319 (1065)
T ss_dssp CCEEETTCEEEEEEEECSS-TTCCEEEEETTCCEEE--------------------TTEEESEEEECBT-----------
T ss_pred ceEECCCCEEEEEEEcCCc-ccceeEEEEcCCEEEE--------------------CCeeecEEEECCC-----------
Confidence 5788999999999999851 1258999999999983 1568899999999
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEEcC
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKND 205 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~ 205 (226)
+.+.+. ++++||.|++|||+..|.+.||+..|.|...
T Consensus 320 ----------------er~dVlv~~~~pG~y~i~~h~~~h~~~Gm~~~~~V~~~ 357 (1065)
T 2j5w_A 320 ----------------TLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQEC 357 (1065)
T ss_dssp ----------------CEEEEEEECCSCEEEEEEECSHHHHHTTCEEEEEEECS
T ss_pred ----------------cEEEEEEEeCCCeeEEEEecCcchhhCCCEEEEEEecC
Confidence 335555 8999999999999999999999999999853
No 36
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.13 E-value=1.7e-10 Score=106.78 Aligned_cols=93 Identities=11% Similarity=0.063 Sum_probs=77.8
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|+|.|.+ ....|+||+||+.|.+++...+ ...|...|++.|.||
T Consensus 205 ~l~v~~G~~vrlrliN~~--~~~~~~~~i~g~~~~vi~~DG~------------~~~p~~~~~~~l~pg----------- 259 (442)
T 2zoo_A 205 SLTAKVGETVRLYIGNGG--PNLVSSFHVIGEIFDTVYVEGG------------SLKNHNVQTTLIPAG----------- 259 (442)
T ss_dssp CEEEETTCEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGS------------SCEECSBSEEEECTT-----------
T ss_pred ceEeCCCCEEEEEEEeCC--CCCceeeEEcCCEEEEEecCCc------------cCCCccceEEEECCC-----------
Confidence 678899999999999975 3578999999999999987422 122678899999999
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhh-hhccceeEEEEEcCc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHH-QSWAMQMAFIVKNDR 206 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H-~~~Gm~~~~~v~~~~ 206 (226)
+...+. .+++||.|++|||...| ...||+..|.|....
T Consensus 260 ----------------~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 260 ----------------GAAIVEFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPD 299 (442)
T ss_dssp ----------------EEEEEEEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCC
T ss_pred ----------------eeEEEEEEcCCCCeEEEEecccccccccCceEEEEecCCC
Confidence 556666 88999999999999999 589999999997654
No 37
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.05 E-value=3e-10 Score=89.75 Aligned_cols=93 Identities=17% Similarity=0.173 Sum_probs=66.2
Q ss_pred EEEeecCCEEEEEEEcCCCCCCc-CcceeecCceEEE--------EecCC-CCCCCccccccCCCCCCCccceEEcCCCC
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGT-DHPMHLHGYSFYV--------VGGGF-GNFDRAKDAKRFNFVEPSLQNTIMVPKNV 142 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~-~HP~HlHG~~f~v--------v~~g~-g~~~~~~~~~~~n~~~p~~rDtv~v~~~~ 142 (226)
.+.++.|++|+|+|.|.+ .. .|.|++|+....+ +..|. ..|.+.. ....++|+..|.||
T Consensus 36 ~i~v~~G~~V~~~~~N~~---~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~-------~~~~~~~t~~l~pG- 104 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNS---AVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD-------KSNIIAESPLANGN- 104 (139)
T ss_dssp EEEECTTCEEEEEEECCC---SSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC-------CTTEEEECCCBCTT-
T ss_pred eEEECCCCEEEEEEEeCC---CCCCeeEEEeccccccchhhhhhhhcccccccccCcc-------cccccccccccCCC-
Confidence 688999999999999984 55 7999999864211 11110 0010000 12346789889999
Q ss_pred CCCCCCCCCcccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 143 NGPKTFKCPKITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
.-..+. .+++||.|.||||+..|.. ||...|+|.
T Consensus 105 --------------------------et~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 105 --------------------------ETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp --------------------------CEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred --------------------------CEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 335566 7889999999999999999 999999873
No 38
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.03 E-value=7.2e-10 Score=97.66 Aligned_cols=86 Identities=19% Similarity=0.249 Sum_probs=67.7
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|++|+|++.|. ....|++|+||... ..-.|. |. .+...|+||
T Consensus 67 ~i~~~~Gd~v~v~~~N~---~~~~~~iH~HG~~~---~~~DG~--------------p~-~~~~~i~PG----------- 114 (288)
T 3gdc_A 67 TLWAREGDALRIHFTNA---GAHPHTIHFHGVHR---ATMDGT--------------PG-IGAGSIAPG----------- 114 (288)
T ss_dssp EEEEETTCEEEEEEEEC---SSSCBCCEESSCCC---GGGSCC--------------TT-STTCSBCTT-----------
T ss_pred cEEEeCCCEEEEEEEeC---CCCcccEEeccccc---cccCCC--------------CC-ccceeECCC-----------
Confidence 69999999999999998 47899999999752 111110 11 134567888
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecch---hhhhccceeEEEEEcCc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLD---HHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~---~H~~~Gm~~~~~v~~~~ 206 (226)
+....+ .++++|.|.||||.. .|...||...|+|.+..
T Consensus 115 ----------------~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~ 156 (288)
T 3gdc_A 115 ----------------QSFTYEFDATPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKE 156 (288)
T ss_dssp ----------------CEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECSS
T ss_pred ----------------CEEEEEEEcCCCccEEEEecCcchHHHHhCcCeEEEEEeCCc
Confidence 557778 899999999999997 79999999999998643
No 39
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.03 E-value=5e-10 Score=103.61 Aligned_cols=83 Identities=13% Similarity=0.171 Sum_probs=65.9
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|++|+|++.|.. .....|++|+||..- .+ | ..++..|+||
T Consensus 61 ~i~v~~Gd~v~v~~~N~l-~~~~~~~iH~HG~~~----~d-G-----------------~~~~~~i~pg----------- 106 (442)
T 2zoo_A 61 FIRVREGDEIEFNLSNHP-SSKMPHNIDLHAVTG----PG-G-----------------GAESSFTAPG----------- 106 (442)
T ss_dssp BEEEETTCEEEEEEEECT-TCSSCBCCEETTCCS----GG-G-----------------GGGGCCBCTT-----------
T ss_pred cEEEeCCCEEEEEEEECC-CCCCCCCEEecCCcC----CC-C-----------------CCccEEECCC-----------
Confidence 588999999999999972 123689999999641 10 1 1134468899
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeec---chhhhhccceeEEEEEcC
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCH---LDHHQSWAMQMAFIVKND 205 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCH---i~~H~~~Gm~~~~~v~~~ 205 (226)
+++.++ .+++||.|+|||| +.+|...||...|+|.+.
T Consensus 107 ----------------~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~ 147 (442)
T 2zoo_A 107 ----------------HTSTFNFKALNPGLYIYHCATAPVGMHIANGMYGLILVEPK 147 (442)
T ss_dssp ----------------CEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECT
T ss_pred ----------------CEEEEEEEcCCCeEEEEecCCCChHHHHhCccEEEEEEeCC
Confidence 668888 9999999999995 679999999999999864
No 40
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.00 E-value=1.9e-09 Score=96.41 Aligned_cols=91 Identities=12% Similarity=0.079 Sum_probs=70.0
Q ss_pred eEEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCC--ccceEEcCCCCCCCCCCC
Q 041358 72 SVKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPS--LQNTIMVPKNVNGPKTFK 149 (226)
Q Consensus 72 ~~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~--~rDtv~v~~~~~~~~~~~ 149 (226)
..+.++.|++++|+..+. ....+++++|||.|+|+.. |.+ .+|. +.|++.|++|
T Consensus 225 ~~l~v~~GervRlin~~~---~~~~~~~~i~gh~~~Vi~D--G~~-----------~~p~~~~~dtv~i~pG-------- 280 (336)
T 1oe1_A 225 NALTAKVGETVLLIHSQA---NRDTRPHLIGGHGDWVWET--GKF-----------ANPPQRDLETWFIRGG-------- 280 (336)
T ss_dssp GCEEEETTCEEEEEEEES---SSCBCEEETTCCEEEEETT--CCT-----------TSCCEEEESBCCBCTT--------
T ss_pred cceEcCCCCEEEEEecCC---CCccceEEECCcCceEeCC--CcC-----------cCCccccceEEEECCC--------
Confidence 468899999999865554 2445566679999999963 321 1232 4699999999
Q ss_pred CCcccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhh-hccceeEEEEEcC
Q 041358 150 CPKITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQ-SWAMQMAFIVKND 205 (226)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~-~~Gm~~~~~v~~~ 205 (226)
+.+.+. .+++||.|+||||...|. ..||+..|.|...
T Consensus 281 -------------------er~dvlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~ 319 (336)
T 1oe1_A 281 -------------------SAGAALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGK 319 (336)
T ss_dssp -------------------EEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESC
T ss_pred -------------------CcEEEEEEcCCCceEEEEechhhccccCCCeEEEEECCC
Confidence 446666 899999999999999885 9999999999753
No 41
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.00 E-value=1.3e-09 Score=81.14 Aligned_cols=83 Identities=10% Similarity=0.027 Sum_probs=60.6
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+| .|. ....|++|+||..+... .| . +.. ....++..+.||
T Consensus 20 ~i~v~~Gd~V~~--~N~---~~~~H~v~~~~~~~~~~-~g--~-----~~~------~~~~~~~~i~pG----------- 69 (105)
T 3cvb_A 20 NVTVHPGDTVKW--VNN---KLPPHNILFDDKQVPGA-SK--E-----LAD------KLSHSQLMFSPG----------- 69 (105)
T ss_dssp EEEECTTEEEEE--EEC---SSCCEEEEECTTSSGGG-CH--H-----HHH------HHCEEEEECSTT-----------
T ss_pred EEEEcCCCEEEE--EEC---CCCCCeEEEeCCCCCcc-cc--c-----ccc------cccccccccCCC-----------
Confidence 688999999976 476 36789999999765321 01 0 000 112477889999
Q ss_pred ccchhhhhhhccccceeEEEEE-eC-CCCeeEEEeecchhhhhccceeEEEEE
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TC-HKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~a-dnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
....++ .+ ++||.|.|||| .|...||...|+|.
T Consensus 70 ----------------~~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 70 ----------------ESYEITFSSDFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp ----------------CEEEEEECTTSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred ----------------CeEEEEEecCCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 335666 66 79999999999 79999999999885
No 42
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=98.94 E-value=1e-08 Score=94.66 Aligned_cols=83 Identities=14% Similarity=0.177 Sum_probs=63.3
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|+|.|... ....|++|+||.. .. .| . | +++.|.||
T Consensus 196 ~i~v~~G~~v~~rl~N~~~-~~~~~~ih~Hg~~----~~-DG--------~------~---~~~~i~pG----------- 241 (447)
T 2dv6_A 196 FLRVRVGDTVELHLKNHKD-SLMVHSVDFHGAT----GP-GG--------A------A---AFTQTDPG----------- 241 (447)
T ss_dssp CEEEETTCEEEEEEEECTT-CSSCBCCEETTCC----SG-GG--------G------G---GGCCBCTT-----------
T ss_pred eEEecCCCEEEEEEEeCCC-CceeEEEeecccc----CC-CC--------C------C---ccEEeCCC-----------
Confidence 5788999999999999841 2468999999952 11 01 0 1 45568999
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecch---hhhhccceeEEEEEcC
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLD---HHQSWAMQMAFIVKND 205 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~---~H~~~Gm~~~~~v~~~ 205 (226)
+...++ .+++||.|.||||.. .|...||...|+|.+.
T Consensus 242 ----------------~~~~~~~~~~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~ 282 (447)
T 2dv6_A 242 ----------------EETVVTFKALIPGIYVYHCATPSVPTHITNGMYGLLLVEPE 282 (447)
T ss_dssp ----------------CEEEEEEECCSCEEEEEECCSSSHHHHHHTTCEEEEEEECT
T ss_pred ----------------CEEEEEEECCCCeEEEEEeCCCChHHHHhCCCEEEEEEeCC
Confidence 445666 889999999999963 7889999999999753
No 43
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=98.73 E-value=2.4e-08 Score=89.41 Aligned_cols=83 Identities=16% Similarity=0.257 Sum_probs=64.4
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|++|+|++.|... ....|++|+||.. ... | . + +...|.||
T Consensus 71 ~i~v~~Gd~v~v~~~N~~~-~~~~~~ih~HG~~----~~d-G--------~------~---~~~~i~PG----------- 116 (327)
T 1kbv_A 71 MIRVREGDTVEVEFSNNPS-STVPHNVDFHAAT----GQG-G--------G------A---AATFTAPG----------- 116 (327)
T ss_dssp BEEEETTCEEEEEEEECTT-CSSCBCCEETTCC----SGG-G--------G------T---TTTCBCTT-----------
T ss_pred eEEEeCCCEEEEEEEECCC-CCCceeeEeCccc----cCC-C--------C------C---cceeecCC-----------
Confidence 6889999999999999731 1368999999963 111 1 0 1 12248888
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecc---hhhhhccceeEEEEEcC
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHL---DHHQSWAMQMAFIVKND 205 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi---~~H~~~Gm~~~~~v~~~ 205 (226)
+....+ .+++||.|.||||. ..|...||...++|.+.
T Consensus 117 ----------------~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~ 157 (327)
T 1kbv_A 117 ----------------RTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPK 157 (327)
T ss_dssp ----------------EEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECT
T ss_pred ----------------CEEEEEEECCCCeEEEEEeCCCChhhhhhcceEEEEEEecC
Confidence 667788 89999999999997 68999999999999864
No 44
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=98.64 E-value=8.5e-08 Score=85.65 Aligned_cols=83 Identities=16% Similarity=0.194 Sum_probs=63.7
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|++|+|++.|.. .+...|.+|+||+.+ ..| | . + +..|.||
T Consensus 66 ~i~v~~Gd~v~v~~~N~~-~~~~~h~~~~h~~~~---~~~-~--------~------~----~~~i~pG----------- 111 (336)
T 1oe1_A 66 TLVVHEGDYVQLTLVNPA-TNAMPHNVDFHGATG---ALG-G--------A------K----LTNVNPG----------- 111 (336)
T ss_dssp CEEEETTCEEEEEEEECT-TCCSCBCCEETTSCS---GGG-G--------G------G----GCCBCTT-----------
T ss_pred eEEEcCCCEEEEEEEcCC-CCCccccceECCCCC---CCC-C--------c------c----eEEeCCC-----------
Confidence 588999999999999973 124689999999742 011 0 0 1 1138899
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecc----hhhhhccceeEEEEEcC
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHL----DHHQSWAMQMAFIVKND 205 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi----~~H~~~Gm~~~~~v~~~ 205 (226)
+....+ .++++|.|.||||. .+|...||...|+|.+.
T Consensus 112 ----------------~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~ 153 (336)
T 1oe1_A 112 ----------------EQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPR 153 (336)
T ss_dssp ----------------EEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECT
T ss_pred ----------------CEEEEEEECCCCeEEEEecCCCCchhHHHhCCCeEEEEEecC
Confidence 557777 88999999999997 47999999999999864
No 45
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.61 E-value=1.4e-07 Score=70.37 Aligned_cols=83 Identities=12% Similarity=0.099 Sum_probs=57.4
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|+ |.+ ...|.+|+|+..+.. .. |. +.. ....|++.+.+|
T Consensus 21 ~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~-~~--g~-----~~~------~~~~~~~~~~pG----------- 70 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA-KS--AD-----LAK------SLSHKQLLMSPG----------- 70 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT-CC--HH-----HHH------HHCBCSCCCSTT-----------
T ss_pred EEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc-cc--cc-----cch------hccccceeeCCC-----------
Confidence 6789999999886 663 567999998764311 00 00 000 011356677888
Q ss_pred ccchhhhhhhccccceeEEEEE-eC-CCCeeEEEeecchhhhhccceeEEEEE
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TC-HKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~a-dnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
....+. .+ +.||.|.|||| .|...||...++|.
T Consensus 71 ----------------~~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 71 ----------------QSTSTTFPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp ----------------CEEEEECCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred ----------------CEEEEEEecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 334556 56 89999999999 89999999999885
No 46
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.60 E-value=1.2e-07 Score=74.58 Aligned_cols=97 Identities=16% Similarity=0.115 Sum_probs=65.6
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCc--eEEEE-ecC--CC---CCCCccccccCCCCCCCccceEEcCCCCCC
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGY--SFYVV-GGG--FG---NFDRAKDAKRFNFVEPSLQNTIMVPKNVNG 144 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~--~f~vv-~~g--~g---~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~ 144 (226)
.+.++.|++|+|+|.|.+. +...|.|+++.. ++... ..| .| .|-+.. + ....+.+|..|.+|
T Consensus 34 ~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~t~~l~pG--- 103 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP-----D-TPNALAWTAMLNAG--- 103 (140)
T ss_dssp EEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT-----T-CTTEEEECCCBCTT---
T ss_pred eEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCcc-----c-cccccccceeeCCC---
Confidence 7889999999999999311 368899999853 12110 000 00 000000 0 11346788889999
Q ss_pred CCCCCCCcccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 145 PKTFKCPKITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
....+. .++.||.|.|||++..|...||...+.|.
T Consensus 104 ------------------------~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 104 ------------------------ESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp ------------------------EEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred ------------------------ceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 224445 67899999999999999999999999886
No 47
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=98.51 E-value=4.1e-07 Score=81.17 Aligned_cols=83 Identities=16% Similarity=0.257 Sum_probs=61.8
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|++|+|++.|.+. +...|.+|+|+.. +..+ . +... .|.||
T Consensus 65 ~i~~~~Gd~v~v~~~N~~~-~~h~Hg~~~~~~~--------~~~~----~-------~~~~---~i~PG----------- 110 (333)
T 1mzy_A 65 LMIVHEGDYVELTLINPPE-NTMPHNIDFHAAT--------GALG----G-------GGLT---LINPG----------- 110 (333)
T ss_dssp EEEEETTCEEEEEEEECTT-CCSCBCCEETTSC--------SGGG----G-------GGGC---CBCTT-----------
T ss_pred cEEecCCCEEEEEEEECCC-CcccccceecCCC--------CCCC----C-------Ccee---EeCCC-----------
Confidence 6899999999999999731 2356777777642 1000 0 1111 38888
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecch-----hhhhccceeEEEEEcC
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLD-----HHQSWAMQMAFIVKND 205 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~-----~H~~~Gm~~~~~v~~~ 205 (226)
+....+ .++++|.|.||||.. +|...||...++|.+.
T Consensus 111 ----------------~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~ 153 (333)
T 1mzy_A 111 ----------------EKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPR 153 (333)
T ss_dssp ----------------EEEEEEEECCSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECT
T ss_pred ----------------CEEEEEEECCCCEEEEEeecCCcccchhhhhCCCEEEEEEccC
Confidence 557777 889999999999996 7999999999999854
No 48
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=98.50 E-value=2.5e-07 Score=82.66 Aligned_cols=88 Identities=15% Similarity=0.169 Sum_probs=63.8
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|++|+|++.|. ....|.+|+||..+.-.....| . |.. ....|+||
T Consensus 35 ~i~~~~Gd~v~v~~~N~---l~~~~siH~HG~~~~~~~~~DG--------~------p~~-t~~~i~PG----------- 85 (318)
T 3g5w_A 35 LIHVMEGDDVTVNVTNM---TTLPHTIHWHGMLQRGTWQSDG--------V------PHA-TQHAIEPG----------- 85 (318)
T ss_dssp EEEEETTCEEEEEEEEC---SSSCBCCEEETCCCTTCGGGSC--------C------BTT-TBCCBCTT-----------
T ss_pred eEEEeCCCEEEEEEEeC---CCCceeEEecCcCCCCCcccCC--------C------ccc-ccccCCCC-----------
Confidence 78999999999999998 4788999999986421101011 0 111 12357888
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhh---hccceeEEEEEcC
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQ---SWAMQMAFIVKND 205 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~---~~Gm~~~~~v~~~ 205 (226)
+....+ .++.+|.|.||||..... ..||...|+|.+.
T Consensus 86 ----------------~~~~y~f~~~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~ 126 (318)
T 3g5w_A 86 ----------------DTFTYKFKAEPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPK 126 (318)
T ss_dssp ----------------CEEEEEEECCSCEEEEEECCSSHHHHHHHSCCEEEEEEECS
T ss_pred ----------------CEEEEEEEcCCCEEEEEEccCChhhhhccCCCEEEEEEcCC
Confidence 456777 889999999999986543 3799999999764
No 49
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=98.38 E-value=1.4e-06 Score=77.73 Aligned_cols=84 Identities=21% Similarity=0.220 Sum_probs=63.5
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|++|+|++.|.. .+...|.+|+||... ..| | . +. + .|.||
T Consensus 72 ~i~v~~Gd~v~v~~~N~~-~~~~~hg~~~~~~~~---~~~-~--------~------~~---~-~i~PG----------- 117 (340)
T 2bw4_A 72 LMVVHENDYVELRLINPD-TNTLLHNIDFHAATG---ALG-G--------G------AL---T-QVNPG----------- 117 (340)
T ss_dssp EEEEETTCEEEEEEEECT-TCCSCBCCEETTSCS---GGG-G--------G------GG---C-CBCTT-----------
T ss_pred cEEEcCCCEEEEEEEeCC-CCCccCcceeCCcCC---CCC-C--------c------cc---e-EeCCC-----------
Confidence 789999999999999973 124678899998541 011 0 0 11 1 38889
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecch----hhhhccceeEEEEEcCc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLD----HHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~----~H~~~Gm~~~~~v~~~~ 206 (226)
+....+ .++++|.|.||||.. .|...||...++|.+..
T Consensus 118 ----------------~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~ 160 (340)
T 2bw4_A 118 ----------------EETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRD 160 (340)
T ss_dssp ----------------EEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTB
T ss_pred ----------------CEEEEEEECCCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCc
Confidence 556777 888999999999976 78999999999998643
No 50
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=98.38 E-value=5.8e-07 Score=78.52 Aligned_cols=86 Identities=19% Similarity=0.254 Sum_probs=62.9
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|+.|+|.+.|. ....+.+|+||..+.. ...| . | .....|.||
T Consensus 37 ~i~~~~Gd~v~v~~~N~---~~~~~siH~HG~~~~~--~~DG--------~------~--~t~~~i~pG----------- 84 (276)
T 3kw8_A 37 LIEVNEGDTLHIEFTNT---MDVRASLHVHGLDYEI--SSDG--------T------A--MNKSDVEPG----------- 84 (276)
T ss_dssp CEEEETTCEEEEEEEEC---SSSCBCCEESSSBCCG--GGSC--------C------T--TTTCSBCTT-----------
T ss_pred eEEEECCCEEEEEEEEC---CCCCccEeecCcccCC--ccCC--------C------c--CCcCCCCCC-----------
Confidence 68999999999999998 4789999999987532 1111 0 1 112346777
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCC-------------CeeEEEeecc------hhhhhccceeEEEEEcCc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHK-------------KRAWFVHCHL------DHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adn-------------pG~W~~HCHi------~~H~~~Gm~~~~~v~~~~ 206 (226)
....-+ .++. +|.|+||||. ..|...||...|+|.+..
T Consensus 85 ----------------~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~ 142 (276)
T 3kw8_A 85 ----------------GTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG 142 (276)
T ss_dssp ----------------CEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred ----------------CEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCC
Confidence 334555 5553 6999999998 478999999999998743
No 51
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=98.32 E-value=6.6e-06 Score=78.35 Aligned_cols=90 Identities=16% Similarity=0.140 Sum_probs=65.7
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|++|+|.+.|.. ....+.+|.||... .+.+..|.. | -.-...|+||
T Consensus 35 ~I~~~~GD~v~v~v~N~l--~~~~tsiHwHGl~~----~~~~~~DGv----------~-~vtq~~I~PG----------- 86 (552)
T 1aoz_A 35 TIRANAGDSVVVELTNKL--HTEGVVIHWHGILQ----RGTPWADGT----------A-SISQCAINPG----------- 86 (552)
T ss_dssp CEEEETTCEEEEEEEECC--SSCCBCEEEETCCC----TTCGGGSCC----------B-TTTBCCBCTT-----------
T ss_pred cEEEeCCCEEEEEEEeCC--CCCCeeEEeCCCcc----CCCcccCCC----------c-ccccCCcCCC-----------
Confidence 589999999999999983 23789999999653 111101110 1 0011246788
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEEcCc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~ 206 (226)
+...-+ .++.+|.|.||||...+...||...|+|.+..
T Consensus 87 ----------------~s~tY~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~ 125 (552)
T 1aoz_A 87 ----------------ETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQ 125 (552)
T ss_dssp ----------------CEEEEEEECCSCEEEEEEECSTTTGGGTCEEEEEEECCT
T ss_pred ----------------CeEEEEEECCCCEEEEEEECchhHHhccCeeeEEEeCCc
Confidence 446667 78999999999999999999999999998753
No 52
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.27 E-value=4.7e-06 Score=61.05 Aligned_cols=80 Identities=13% Similarity=0.146 Sum_probs=56.0
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+| .|.+ ...|.+|+|+..+ .. | ++. ....+|+..+.+|.
T Consensus 19 ~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~---p~--~-~~~----------~~~~~~~~~~~pG~---------- 67 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNA---GFPHNIVFDEDAI---PS--G-VNA----------DAISRDDYLNAPGE---------- 67 (98)
T ss_dssp EEEECTTCEEEE--EECS---SCCEEEEECGGGS---CT--T-CCH----------HHHCEEEEECSTTC----------
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCC---CC--c-ccc----------ccccccceecCCCC----------
Confidence 688999999887 5763 5689999987521 00 1 000 01235788899992
Q ss_pred ccchhhhhhhccccceeEEEEEeCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 153 ITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
...+ ..+.||.|.|||+ .|...||...++|+
T Consensus 68 -----------------~~~~-tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 68 -----------------TYSV-KLTAAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp -----------------EEEE-ECCSCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred -----------------EEEE-EeCCCeEEEEEcC--CccccCCeEEEEEC
Confidence 2344 4469999999999 69999999999873
No 53
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.26 E-value=5.4e-06 Score=59.70 Aligned_cols=72 Identities=13% Similarity=0.146 Sum_probs=52.9
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|+ |.+ ...|.+++++. + +...+...+.+|
T Consensus 20 ~i~v~~Gd~V~~~--n~~---~~~H~v~~~~~---------~---------------~~~~~~~~~~~g----------- 59 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNK---LAPHNVVVEGQ---------P---------------ELSHKDLAFSPG----------- 59 (91)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEETTC---------G---------------GGCEEEEECSTT-----------
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCC---------C---------------ccCcccceeCCC-----------
Confidence 6789999999876 652 46799888872 0 111356778888
Q ss_pred ccchhhhhhhccccceeEEEEEeCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 153 ITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
....+ ..+.||.|.|||+ .|...||...++|+
T Consensus 60 ----------------~~~~~-~f~~~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 60 ----------------ETFEA-TFSEPGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp ----------------CEEEE-ECCSCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred ----------------CEEEE-EeCCCEEEEEEeC--CCccCCCEEEEEEC
Confidence 22333 4589999999999 78888999998873
No 54
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=98.26 E-value=1.8e-06 Score=77.50 Aligned_cols=88 Identities=17% Similarity=0.218 Sum_probs=64.0
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|++|+|++.|. ....+.+|.||... ... ...|.. | ......|.||
T Consensus 36 ~I~v~~Gd~v~v~v~N~---l~~~~siH~HG~~~--~~~--~~~DGv----------p-~vtq~~I~PG----------- 86 (339)
T 2zwn_A 36 LIHVQEGDDVIVNVTNN---TSLPHTIHWHGVHQ--KGT--WRSDGV----------P-GVTQQPIEAG----------- 86 (339)
T ss_dssp EEEEETTCEEEEEEEEE---SSSCBCCEEETCCC--TTC--GGGSCC----------B-TTTBCCBCTT-----------
T ss_pred eEEEECCCEEEEEEEEC---CCCCccEEeCCCCc--CCC--cccCCC----------C-ccccCccCCC-----------
Confidence 78999999999999998 36789999999653 111 001110 1 1123457888
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchh--hhh-ccceeEEEEEcC
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDH--HQS-WAMQMAFIVKND 205 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~--H~~-~Gm~~~~~v~~~ 205 (226)
+....+ .++.+|.|.||||... |.. .||...++|.+.
T Consensus 87 ----------------~~~~y~f~~~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~ 127 (339)
T 2zwn_A 87 ----------------DSYTYKFKADRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPK 127 (339)
T ss_dssp ----------------CEEEEEEECCSCEEEEEECCSSHHHHTTTSCCEEEEEEECS
T ss_pred ----------------CeEEEEEECCCCEEEEEEecCCchhhhhcCCceEeEEecCC
Confidence 445666 8889999999999876 677 899999999764
No 55
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=98.24 E-value=1.6e-05 Score=75.40 Aligned_cols=121 Identities=17% Similarity=0.197 Sum_probs=79.4
Q ss_pred CeeEEEEEeccCCCccCCCCCc-eEEEEEecCCCCCCCCCCCCCCCCCCCcceEEEeecCCEEEEEEEcCCCCCC----c
Q 041358 21 NKYYMSAKAHSSATDVYDDNTT-TTAIVQYEGLYPSSKTPLPNLPSYDDTKASVKVLEYNTAVEIVFQGTDLLAG----T 95 (226)
Q Consensus 21 g~Y~ira~~~~~~~~~~~~~~~-~~AILrY~g~~p~~~~~lP~~p~~~d~~~~~~~~~~g~~v~iv~~n~~~~~~----~ 95 (226)
..|.+.+....... ... .+-++.|.|..|.. +++++.|+.|+|.+.|.- .. .
T Consensus 24 ~~~~l~i~~~~~~~-----dg~~~~~~~~~NG~~PGP----------------~i~~~~Gd~v~v~v~N~l--~~~~~~~ 80 (521)
T 1v10_A 24 VALDLHILNANLDP-----DGTGARSAVTAEGTTIAP----------------LITGNIDDRFQINVIDQL--TDANMRR 80 (521)
T ss_dssp SEEEEEEEEEEECT-----TSSCCEEEEEESSSSSCC----------------CEEEETTCEEEEEEEECC--CCTTSCC
T ss_pred ceEEEEEEEEEEcC-----CCcceEEEEEECCccCCC----------------cEEEeCCCEEEEEEEECC--CCccCCC
Confidence 46777665432111 123 45567788753311 589999999999999973 21 7
Q ss_pred CcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCcccchhhhhhhccccceeEEEEE-
Q 041358 96 DHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTD- 174 (226)
Q Consensus 96 ~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir- 174 (226)
.+.+|.||.... +....|. ....-.-.|+|| +...-+
T Consensus 81 ~tsiHwHGl~~~----~~~~~DG-----------v~~vtq~~I~PG---------------------------~s~~Y~f 118 (521)
T 1v10_A 81 ATSIHWHGFFQA----GTTEMDG-----------PAFVNQCPIIPN---------------------------ESFVYDF 118 (521)
T ss_dssp CBCEEEETCCCT----TCGGGSC-----------CBTTTBCCBCTT---------------------------EEEEEEE
T ss_pred CceEecCCeecc----CCCccCC-----------CcceeeCCcCCC---------------------------CeEEEEE
Confidence 899999997531 1100010 100001236778 445666
Q ss_pred e-CCCCeeEEEeecchhhhhccceeEEEEEcCc
Q 041358 175 T-CHKKRAWFVHCHLDHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 175 ~-adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~ 206 (226)
. ++.+|.+.||||...+...||...|+|.++.
T Consensus 119 ~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 151 (521)
T 1v10_A 119 VVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN 151 (521)
T ss_dssp ECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred ecCCCCccEEEEeccCCchhcCceEEEEEcCCc
Confidence 6 7899999999999999999999999998654
No 56
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.24 E-value=6.8e-06 Score=60.26 Aligned_cols=79 Identities=11% Similarity=0.145 Sum_probs=55.2
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|+ |.+ ...|.+|+++..+- | .. .. ....++..+.+|.
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~p----g------~~-~~------~~~~~~~~~~pG~---------- 67 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNK---LSPHNIVFDADGVP----A------DT-AA------KLSHKGLLFAAGE---------- 67 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECCSSSC----H------HH-HH------HHCEEEEECSTTC----------
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCCCC----c------cc-cc------cccccccccCCCC----------
Confidence 6889999999887 653 56799998874321 0 00 00 0114678888882
Q ss_pred ccchhhhhhhccccceeEEEEEeCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 153 ITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
. ..+ ..+.||.|.|||+ .|...||...++|+
T Consensus 68 ----------------~-~~~-tf~~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 68 ----------------S-FTS-TFTEPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp ----------------E-EEE-ECCSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred ----------------E-EEE-EcCCCeEEEEEcC--CccccCCeEEEEEC
Confidence 2 333 4579999999999 79999999999873
No 57
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=98.23 E-value=2.5e-06 Score=75.82 Aligned_cols=86 Identities=17% Similarity=0.223 Sum_probs=59.2
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|++|+|+|.|. ....+.+|.||..+..- ..| . |. ....|.||
T Consensus 43 ~i~~~~Gd~v~v~~~N~---l~~~~siH~HG~~~~~~--~dG--------~------~~--~~~~i~PG----------- 90 (313)
T 3tas_A 43 LIELNEGDTLHIEFENT---MDVPVSLHVHGLDYEIS--SDG--------T------KQ--SRSDVEPG----------- 90 (313)
T ss_dssp CEEEETTCEEEEEEEEC---SSSCBCCEESSSBCCGG--GSC--------S------TT--TTCCBCTT-----------
T ss_pred eEEEECCCEEEEEEEEC---CCCCccEeecCCcCCcc--CCC--------C------cc--ccCCcCCC-----------
Confidence 68999999999999998 47889999999864211 111 0 10 11136677
Q ss_pred ccchhhhhhhccccceeEEEEE-eCC-------------CCeeEEEeecch------hhhhccceeEEEEEcCc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCH-------------KKRAWFVHCHLD------HHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~ad-------------npG~W~~HCHi~------~H~~~Gm~~~~~v~~~~ 206 (226)
+...-+ ++. ..|.|.||||.. .|...||...|+|.+..
T Consensus 91 ----------------~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~ 148 (313)
T 3tas_A 91 ----------------GTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG 148 (313)
T ss_dssp ----------------CEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred ----------------CEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccc
Confidence 223333 443 559999999964 35678999999998643
No 58
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.21 E-value=9.6e-06 Score=61.13 Aligned_cols=72 Identities=15% Similarity=0.195 Sum_probs=51.8
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|+.|+|++.|.+ ...|-|.+.+ .| -...+.||
T Consensus 39 ~i~v~~G~~V~~~~~n~d---~~~H~~~i~~-------~~---------------------~~~~i~pG----------- 76 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKS---PISEGFSIDA-------FG---------------------VQEVIKAG----------- 76 (112)
T ss_dssp EEEEETTCEEEEEEEECS---SSCEEEEEGG-------GT---------------------EEEEECTT-----------
T ss_pred EEEEeCCCEEEEEEEECC---CCeEEEEEcC-------CC---------------------ceeEeCCC-----------
Confidence 688999999999999984 3333332221 11 14568888
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
....+. .+++||.|.||||..-|... |...++|.
T Consensus 77 ----------------~~~~~~f~~~~~G~y~~~C~~~~~~~~-M~g~i~V~ 111 (112)
T 1iby_A 77 ----------------ETKTISFTADKAGAFTIWCQLHPKNIH-LPGTLNVV 111 (112)
T ss_dssp ----------------CEEEEEEECCSCEEEEEBCSSSCTTTB-CCEEEEEE
T ss_pred ----------------CEEEEEEECCCCEEEEEECCCCCchHH-CEEEEEEe
Confidence 335666 78999999999999877544 98888875
No 59
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=98.17 E-value=6.3e-06 Score=78.77 Aligned_cols=90 Identities=11% Similarity=0.103 Sum_probs=65.3
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCC-CCCCCCCCCCC
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPK-NVNGPKTFKCP 151 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~-~~~~~~~~~~~ 151 (226)
+++++.|++|+|.+.|.. ....+.+|.||.... +....|. ..-.-...|+| |
T Consensus 68 ~i~~~~GD~v~v~v~N~l--~~~~tsiHwHG~~~~----~~~~~DG-----------~~~~tq~~I~P~G---------- 120 (559)
T 2q9o_A 68 NIVANWGDTVEVTVINNL--VTNGTSIHWHGIXQK----DTNLHDG-----------ANGVTECPIPPKG---------- 120 (559)
T ss_dssp CEEEETTCEEEEEEEEEC--SSCCBCEEEETCCCT----TCGGGSC-----------CBTTTBCCBCTTT----------
T ss_pred cEEEeCCCEEEEEEEeCC--CCCCceEEcCCCccC----CCCCcCC-----------CCccccCccCCCC----------
Confidence 689999999999999972 356899999997531 1000011 00000123677 7
Q ss_pred cccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEEcCc
Q 041358 152 KITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~ 206 (226)
+...-+ .++.+|.+.||||...|...||...|+|.++.
T Consensus 121 -----------------~~~~Y~f~~~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 159 (559)
T 2q9o_A 121 -----------------GQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGPA 159 (559)
T ss_dssp -----------------EEEEEEEECCSCEEEEEEECSTTGGGGTCEEEEEEECCC
T ss_pred -----------------CeEEEEEECCCCEEEEEEEcccchhcCCceEEEEecCCC
Confidence 556667 88899999999999999999999999998643
No 60
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=98.14 E-value=2.1e-06 Score=76.01 Aligned_cols=95 Identities=8% Similarity=0.093 Sum_probs=63.8
Q ss_pred eEEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCC
Q 041358 72 SVKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCP 151 (226)
Q Consensus 72 ~~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~ 151 (226)
.+++++.|++|+|+|.|. ....+.+|.||..+..-..| ..+. ....+..++...|+||
T Consensus 60 P~I~v~~Gd~v~v~~~N~---l~~~~siH~HGl~~~~~~dG-~~~~--------dg~~~~~~~~~~I~PG---------- 117 (306)
T 1sdd_A 60 PTLYAEVGDIMKVHFKNK---AHKPLSIHAQGIKYSKFSEG-ASYS--------DHTLPMEKMDDAVAPG---------- 117 (306)
T ss_dssp CCEEEETTCEEEEEEEEC---SSSCBCCEEESSCCCTTTSC-CCSC--------CCCCHHHHTTTCBCTT----------
T ss_pred CEEEEeCCCEEEEEEEEC---CCCcccEeecceecccccCC-CccC--------CCCcccccCCCccCCC----------
Confidence 479999999999999997 36889999999874221111 1110 0000112223467888
Q ss_pred cccchhhhhhhccccceeEEEEE-eCCC----------CeeEEEeecchh--hhhccceeEEEEEcC
Q 041358 152 KITCHEQALIHMNMCLHAWVLTD-TCHK----------KRAWFVHCHLDH--HQSWAMQMAFIVKND 205 (226)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~ir-~adn----------pG~W~~HCHi~~--H~~~Gm~~~~~v~~~ 205 (226)
+....+ .++. +|.|.||||... +...||...|+|.+.
T Consensus 118 -----------------~~~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~ 167 (306)
T 1sdd_A 118 -----------------QEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKK 167 (306)
T ss_dssp -----------------CEEEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECT
T ss_pred -----------------CeEEEEEEeCCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccC
Confidence 334555 5544 389999999776 778999999999764
No 61
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=98.14 E-value=3.9e-06 Score=75.67 Aligned_cols=85 Identities=19% Similarity=0.254 Sum_probs=60.7
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|++|+|+|.|.. ...+.+|.||..+. ... .|. | .+...|+||
T Consensus 78 ~I~v~~Gd~v~v~~~N~l---~~~~sih~HG~~~~-~~~-DG~--------------~--~t~~~I~PG----------- 125 (343)
T 3cg8_A 78 LIEVNEGDTLHIEFTNTM---DVRASLHVHGLDYE-ISS-DGT--------------A--MNKSDVEPG----------- 125 (343)
T ss_dssp CEEEETTCEEEEEEEECS---SSCBCCEESSSBCC-GGG-SCC--------------T--TTTCSBCTT-----------
T ss_pred EEEEECCCEEEEEEEECC---CCCeeEEecCcccC-CcC-CCc--------------c--cccccccCC-----------
Confidence 689999999999999983 67788999998865 211 121 1 122346777
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCC-------------CeeEEEeecc------hhhhhccceeEEEEEcC
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHK-------------KRAWFVHCHL------DHHQSWAMQMAFIVKND 205 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adn-------------pG~W~~HCHi------~~H~~~Gm~~~~~v~~~ 205 (226)
.....+ .++. .|.|+||||. ..+...||...++|.+.
T Consensus 126 ----------------~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~ 182 (343)
T 3cg8_A 126 ----------------GTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK 182 (343)
T ss_dssp ----------------CEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECT
T ss_pred ----------------CEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecC
Confidence 223344 5544 4899999996 46889999999998764
No 62
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=98.14 E-value=8.5e-06 Score=76.83 Aligned_cols=90 Identities=16% Similarity=0.169 Sum_probs=64.4
Q ss_pred EEEeecCCEEEEEEEcCCCCCC----cCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCC
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAG----TDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTF 148 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~----~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~ 148 (226)
+++++.|+.|+|.+.|.- .. ..+.+|.||... .+....|.. |.. ---.|+||
T Consensus 35 ~i~~~~Gd~v~v~v~N~l--~~~~~~~~tsiHwHG~~~----~~~~~~DGv----------~~v-tq~~I~PG------- 90 (503)
T 1hfu_A 35 LIRGGKNDNFELNVVNDL--DNPTMLRPTSIHWHGLFQ----RGTNWADGA----------DGV-NQCPISPG------- 90 (503)
T ss_dssp EEEEETTCCEEEEEEECC--CCTTSCCSBCEEEETCCC----TTCGGGSCC----------BTT-TBCCBCTT-------
T ss_pred cEEEeCCCEEEEEEEeCC--CCccCCCcccEeccceec----cCCCccCCC----------ccc-ccCCcCCC-------
Confidence 799999999999999973 21 789999999653 111101110 000 01136788
Q ss_pred CCCcccchhhhhhhccccceeEEEEE-e-CCCCeeEEEeecchhhhhccceeEEEEEcCc
Q 041358 149 KCPKITCHEQALIHMNMCLHAWVLTD-T-CHKKRAWFVHCHLDHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~ir-~-adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~ 206 (226)
+...-+ . ++.+|.+.||||...+...||...|+|.++.
T Consensus 91 --------------------~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (503)
T 1hfu_A 91 --------------------HAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (503)
T ss_dssp --------------------CEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred --------------------CeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCC
Confidence 445666 6 7899999999999999999999999998654
No 63
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=98.12 E-value=5.7e-05 Score=71.34 Aligned_cols=90 Identities=17% Similarity=0.157 Sum_probs=63.9
Q ss_pred EEEeecCCEEEEEEEcCCCCCC----cCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCC
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAG----TDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTF 148 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~----~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~ 148 (226)
+++++.|++|+|.+.|.- .. ....+|.||.... +....|. +...---.|+||
T Consensus 36 ~I~~~~GD~v~v~v~N~l--~~~~~~~~tsiHwHGl~~~----~~~~~DG-----------v~~vtq~pI~PG------- 91 (495)
T 3t6v_A 36 VIAGNVGDNFQIVTFNQL--IECSMLVDTSIHWHGEFQK----GTNWADG-----------PAFITQCPIIVG------- 91 (495)
T ss_dssp EEEEETTCEEEEEEEECC--CCGGGCSCBCEEEETCCCT----TCGGGSC-----------CBTTTBCCBCTT-------
T ss_pred eEEEECCcEEEEEEEECC--CCccCCCceEEEeCCcccC----CCccccC-----------CCccccCCCCCC-------
Confidence 799999999999999972 22 3689999997531 1100010 110011246788
Q ss_pred CCCcccchhhhhhhccccceeEEEEE-eC-CCCeeEEEeecchhhhhccceeEEEEEcCc
Q 041358 149 KCPKITCHEQALIHMNMCLHAWVLTD-TC-HKKRAWFVHCHLDHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~ir-~a-dnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~ 206 (226)
+...-+ .+ +.+|.+.||||...+...||...|+|.++.
T Consensus 92 --------------------~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~ 131 (495)
T 3t6v_A 92 --------------------NSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPN 131 (495)
T ss_dssp --------------------CEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred --------------------CeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCcc
Confidence 445666 66 789999999999999999999999998654
No 64
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=98.10 E-value=4.9e-05 Score=71.87 Aligned_cols=90 Identities=16% Similarity=0.235 Sum_probs=63.7
Q ss_pred EEEeecCCEEEEEEEcCCCCCC----cCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCC
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAG----TDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTF 148 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~----~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~ 148 (226)
+++++.|++|+|.+.|.- .. ..+.+|.||.... +....|. +...---.|+||
T Consensus 35 ~I~~~~GD~v~V~v~N~l--~~~~~~~~tsiHwHGl~~~----~~~~~DG-----------v~~vtq~pI~PG------- 90 (499)
T 3pxl_A 35 LVAGNIGDRFQLNVIDNL--TNHTMLKSTSIHWHGFFQH----GTNWADG-----------PAFINQCPISPG------- 90 (499)
T ss_dssp CEEEETTCEEEEEEEECC--CCGGGCSCBCEEEETCCCT----TCGGGSC-----------CBTTTBCCBCTT-------
T ss_pred eEEEeCCCEEEEEEEECC--CCccCCCceEEEeCCcccC----CCccccC-----------CCccccCCCCCC-------
Confidence 589999999999999972 22 4689999997531 1100010 110011246788
Q ss_pred CCCcccchhhhhhhccccceeEEEEE-eC-CCCeeEEEeecchhhhhccceeEEEEEcCc
Q 041358 149 KCPKITCHEQALIHMNMCLHAWVLTD-TC-HKKRAWFVHCHLDHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~ir-~a-dnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~ 206 (226)
+...-+ .+ +.+|.+.||||...+...||...|+|.++.
T Consensus 91 --------------------~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~ 130 (499)
T 3pxl_A 91 --------------------HSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPN 130 (499)
T ss_dssp --------------------CEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred --------------------CeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCc
Confidence 445666 66 789999999999999999999999998654
No 65
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=98.10 E-value=6e-06 Score=73.03 Aligned_cols=85 Identities=20% Similarity=0.178 Sum_probs=58.7
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|++|+|+|.|. ....+.+|.||..+.. ...| ..++ .-.|.||
T Consensus 59 ~i~~~~GD~v~v~~~N~---l~~~~siH~HG~~~~~--~~DG--------~~~~--------~~~i~PG----------- 106 (299)
T 3t9w_A 59 VLEMWEGDTLEIDLVNT---TDRVLSLHPHGVDYDV--NSDG--------TLMN--------GSAVMPG----------- 106 (299)
T ss_dssp CEEEETTCEEEEEEEEC---SSSCBCCEESSSBCCG--GGSC--------CTTT--------TCCBCTT-----------
T ss_pred eEEEECCeEEEEEEEEC---CCCCccEEeCCcccCC--ccCC--------Cccc--------cCccCCC-----------
Confidence 68999999999999998 4778999999985421 1111 1111 1135677
Q ss_pred ccchhhhhhhccccceeEEEEE-eCC-------------CCeeEEEeecch------hhhhccceeEEEEEcC
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCH-------------KKRAWFVHCHLD------HHQSWAMQMAFIVKND 205 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~ad-------------npG~W~~HCHi~------~H~~~Gm~~~~~v~~~ 205 (226)
+...-+ ++. .+|.|.||||.. .+...||...|+|.+.
T Consensus 107 ----------------~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~ 163 (299)
T 3t9w_A 107 ----------------QTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQ 163 (299)
T ss_dssp ----------------CEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECT
T ss_pred ----------------CeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecc
Confidence 223333 433 679999999964 3678899999999864
No 66
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.04 E-value=9.1e-06 Score=59.45 Aligned_cols=78 Identities=14% Similarity=0.106 Sum_probs=53.5
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|+ |.+ ...|.+++++..+ ..+ .. ....++..+.+|.
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~-----~~~-------~~------~~~~~~~~~~~g~---------- 66 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNK---VGPHNVIFDKVPA-----GES-------AP------ALSNTKLAIAPGS---------- 66 (97)
T ss_dssp EEEECTTCEEEEE--ECS---SCCCCBEEEECCT-----TSC-------HH------HHCBCCCCCSCSC----------
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCCCC-----ccc-------cc------cccccceecCCCC----------
Confidence 6789999998776 653 5679888876543 000 00 0013556677772
Q ss_pred ccchhhhhhhccccceeEEEEEeCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 153 ITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
. ..+ ..+.||.|.|||+ .|...||...++|+
T Consensus 67 ----------------~-~~~-tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 67 ----------------F-YSV-TLGTPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp ----------------C-EEE-ECCSCSEEEEECS--STTTTTCEEEEEEC
T ss_pred ----------------E-EEE-EeCCCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 2 233 4589999999999 89999999998873
No 67
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=98.04 E-value=6e-05 Score=72.66 Aligned_cols=90 Identities=10% Similarity=0.113 Sum_probs=65.3
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|++|+|.+.|.- ......+|.||.... +....|. ++..-.-.|+||
T Consensus 99 ~I~~~~GD~v~V~v~N~l--~~~~tsIHwHGl~~~----~t~~~DG-----------vp~vTq~pI~PG----------- 150 (580)
T 3sqr_A 99 AIIADWGDNLIIHVTNNL--EHNGTSIHWHGIRQL----GSLEYDG-----------VPGVTQCPIAPG----------- 150 (580)
T ss_dssp CEEEETTCEEEEEEEECC--SSCCBCEEETTCCCT----TCGGGSC-----------CBTTTBCCBCTT-----------
T ss_pred eEEEeCCCEEEEEEEECC--CCCcceEEecccccC----CCccccC-----------CCccccCCCCCC-----------
Confidence 689999999999999972 236799999997531 1111111 111011247788
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEEcCc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~~ 206 (226)
+...-+ .++.+|.+.||||...+...||...|+|.++.
T Consensus 151 ----------------~sftY~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~ 189 (580)
T 3sqr_A 151 ----------------DTLTYKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPA 189 (580)
T ss_dssp ----------------CEEEEEEECCCCEEEEEEECSTTGGGGTCEEEEEEECCC
T ss_pred ----------------CeEEEEEECCCCcceEEeecccccccCcCEEEEEeeCcc
Confidence 446667 88899999999999999999999999998643
No 68
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=97.99 E-value=1.5e-05 Score=74.27 Aligned_cols=84 Identities=13% Similarity=0.180 Sum_probs=63.9
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|+.|+|.+.|. ....+.+|.||.... ....| . | ...|+||
T Consensus 51 ~i~~~~Gd~v~v~~~N~---l~~~tsiHwHG~~~~--~~~DG--------~------~----~~~i~PG----------- 96 (451)
T 2uxt_A 51 TIRVWKGDDVKLIYSNR---LTENVSMTVAGLQVP--GPLMG--------G------P----ARMMSPN----------- 96 (451)
T ss_dssp EEEEETTCEEEEEEEEC---SSSCBCEEEETCCCC--GGGSC--------S------G----GGCBCTT-----------
T ss_pred eEEEeCCCEEEEEEEEC---CCCCccEEECCccCC--CCCCC--------C------C----cCcCCCC-----------
Confidence 79999999999999998 368899999997531 11111 0 1 1246788
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCC-CeeEEEeecc----hhhhhccceeEEEEEcCc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHK-KRAWFVHCHL----DHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adn-pG~W~~HCHi----~~H~~~Gm~~~~~v~~~~ 206 (226)
+...-+ .++. +|.|.||||. ..|...||...|+|.++.
T Consensus 97 ----------------~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~ 140 (451)
T 2uxt_A 97 ----------------ADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEV 140 (451)
T ss_dssp ----------------CEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHH
T ss_pred ----------------CeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCc
Confidence 335556 7776 9999999999 778999999999998754
No 69
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=97.99 E-value=2.2e-05 Score=74.62 Aligned_cols=90 Identities=21% Similarity=0.301 Sum_probs=64.6
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|+.|+|.+.|.- ....+.+|.||.... +....|. ....--..|+||
T Consensus 35 ~i~~~~Gd~v~v~v~N~l--~~~~tsiHwHG~~~~----~~~~~DG-----------~~~vtq~pI~PG----------- 86 (534)
T 1zpu_A 35 DITVNKGDRVQIYLTNGM--NNTNTSMHFHGLFQN----GTASMDG-----------VPFLTQCPIAPG----------- 86 (534)
T ss_dssp CEEEETTCEEEEEEECCC--SSCCBCCEEETCCCT----TCGGGSC-----------CBTTTBCCBCTT-----------
T ss_pred cEEEECCCEEEEEEEeCC--CCCCeeEEcCCcccC----CCCcccC-----------CCccccCCcCCC-----------
Confidence 589999999999999973 238899999996531 1100011 000001237788
Q ss_pred ccchhhhhhhccccceeEEEEE-eCC-CCeeEEEeecchhhhhccceeEEEEEcCc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCH-KKRAWFVHCHLDHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~ad-npG~W~~HCHi~~H~~~Gm~~~~~v~~~~ 206 (226)
+...-+ .++ .+|.+.||||...+...||...|+|.++.
T Consensus 87 ----------------~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 126 (534)
T 1zpu_A 87 ----------------STMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDS 126 (534)
T ss_dssp ----------------CEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTT
T ss_pred ----------------CeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCC
Confidence 445666 676 99999999999999999999999998754
No 70
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=97.98 E-value=4.4e-05 Score=56.43 Aligned_cols=71 Identities=14% Similarity=0.224 Sum_probs=52.0
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|++.|.+ ...|.|.+.+..+ ...+.+|
T Consensus 29 ~i~v~~G~tV~~~~~n~d---~~~H~~~~~~~~~----------------------------~~~~~pg----------- 66 (100)
T 4hci_A 29 VITIPINESTTLLLKNKG---KSEHTFTIKKLGI----------------------------DVVVESG----------- 66 (100)
T ss_dssp EEEECTTSCEEEEEEECS---SSCEEEEEGGGTE----------------------------EEEECTT-----------
T ss_pred EEEECCCCEEEEEEEcCC---CceEEEEEecCCc----------------------------ceeecCC-----------
Confidence 789999999999999984 4556554433211 1245666
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
.-..+. .++.||.+.|+|. .|...||...++|+
T Consensus 67 ----------------~~~~~~~t~~~~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 67 ----------------KEKNITVKPKSAGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp ----------------CEEEEEECCCSCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred ----------------cceeEEEecccCceEEEECc--cccCCCCEEEEEEC
Confidence 224555 7899999999997 59999999999874
No 71
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=97.96 E-value=7e-05 Score=70.75 Aligned_cols=116 Identities=16% Similarity=0.232 Sum_probs=79.8
Q ss_pred CCeeEEEEEeccCCCccCCCCCceEEEEEecCCCCCCCCCCCCCCCCCCCcceEEEeecCCEEEEEEEcCCCCCCcCcce
Q 041358 20 PNKYYMSAKAHSSATDVYDDNTTTTAIVQYEGLYPSSKTPLPNLPSYDDTKASVKVLEYNTAVEIVFQGTDLLAGTDHPM 99 (226)
Q Consensus 20 pg~Y~ira~~~~~~~~~~~~~~~~~AILrY~g~~p~~~~~lP~~p~~~d~~~~~~~~~~g~~v~iv~~n~~~~~~~~HP~ 99 (226)
.+.|.+.++...... ....+-++.|.|..|.. +++++.|+.|+|.+.|. ....+.+
T Consensus 17 ~~~~~l~~~~~~~~~-----~G~~~~~~~~NG~~pGP----------------~i~~~~Gd~v~v~~~N~---l~~~tsi 72 (488)
T 3od3_A 17 RNRIQLTIGAGQSTF-----GGKTATTWGYNGNLLGP----------------AVKLQRGKAVTVDIYNQ---LTEETTL 72 (488)
T ss_dssp TSEEEEEEEEEEEEE-----TTEEEEEEEESSSSBCC----------------EEEEETTCEEEEEEEEC---SSSCBCC
T ss_pred CeeEEEEEEEEEEcc-----CCeEEEEEEECCcCCCC----------------eEEEeCCeEEEEEEEeC---CcCceeE
Confidence 356877776543221 22345677888753311 79999999999999997 4678999
Q ss_pred eecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCcccchhhhhhhccccceeEEEEE-eCCC
Q 041358 100 HLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTD-TCHK 178 (226)
Q Consensus 100 HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir-~adn 178 (226)
|+||.... ..-.| . | -..|+|| +...-+ .++.
T Consensus 73 HwHG~~~~--~~~DG--------~------p----~~~i~PG---------------------------~~~~Y~f~~~~ 105 (488)
T 3od3_A 73 HWHGLEVP--GEVDG--------G------P----QGIIPPG---------------------------GKRSVTLNVDQ 105 (488)
T ss_dssp EEETCCCC--HHHHC--------C------T----TCCBCTT---------------------------CEEEEEEECCS
T ss_pred eecccccC--cccCC--------C------C----cCcCcCC---------------------------CeEEEEEecCC
Confidence 99998631 11011 0 1 1246777 345556 7777
Q ss_pred -CeeEEEeecc----hhhhhccceeEEEEEcCc
Q 041358 179 -KRAWFVHCHL----DHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 179 -pG~W~~HCHi----~~H~~~Gm~~~~~v~~~~ 206 (226)
+|.+.||||. ..+...||...++|.++.
T Consensus 106 ~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~ 138 (488)
T 3od3_A 106 PAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDE 138 (488)
T ss_dssp CSEEEEEECCCTTTHHHHHHTTCCEEEEEECHH
T ss_pred CceeEEEEecCCCcchhhhhccceeEEEEcCcc
Confidence 5999999997 568889999999998754
No 72
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=97.94 E-value=9e-05 Score=69.85 Aligned_cols=115 Identities=16% Similarity=0.210 Sum_probs=77.1
Q ss_pred eeEEEEEeccCCCccCCCCCceEEEEEecCCCCCCCCCCCCCCCCCCCcceEEEeecCCEEEEEEEcCCCCCCcCcceee
Q 041358 22 KYYMSAKAHSSATDVYDDNTTTTAIVQYEGLYPSSKTPLPNLPSYDDTKASVKVLEYNTAVEIVFQGTDLLAGTDHPMHL 101 (226)
Q Consensus 22 ~Y~ira~~~~~~~~~~~~~~~~~AILrY~g~~p~~~~~lP~~p~~~d~~~~~~~~~~g~~v~iv~~n~~~~~~~~HP~Hl 101 (226)
.|.+.+....... .....+-++.|.|..|.+ +++++.|+.|+|.+.|. ....+.+|+
T Consensus 52 ~~~L~~~~~~~~~----~~G~~~~~~~~NG~~PGP----------------tIr~~~Gd~v~v~v~N~---l~~~tsiHw 108 (481)
T 3zx1_A 52 HATLEIKENHIEL----IKGKKTLFYTYNGLVPAP----------------KIEVFEGDKLEILVKNK---LKEATTIHW 108 (481)
T ss_dssp EEEEEEEEEEECC----STTCCEEEEEETTBSSCC----------------BEEEETTCEEEEEEEEC---SSSCBCCEE
T ss_pred EEEEEEEEEEEEc----cCCcEEEEEEECCCCCCc----------------eEEEECCcEEEEEEEeC---CCCCeeEEe
Confidence 4667665533221 112345567787753311 69999999999999998 468899999
Q ss_pred cCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCcccchhhhhhhccccceeEEEEE-eCCC--
Q 041358 102 HGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPKITCHEQALIHMNMCLHAWVLTD-TCHK-- 178 (226)
Q Consensus 102 HG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir-~adn-- 178 (226)
||-.. . +..|. . | . ..|+|| +...-+ .++.
T Consensus 109 HGl~~---~---~~~DG----~------p--q--~~I~PG---------------------------~s~~Y~f~~~~~~ 141 (481)
T 3zx1_A 109 HGVPV---P---PDQDG----S------P--H--DPILAG---------------------------EERIYRFEIPQDS 141 (481)
T ss_dssp ETCCC---C---GGGSC----C------T--T--SCBCTT---------------------------CEEEEEEECCTTC
T ss_pred cCccc---C---CccCC----C------c--c--CcCCCC---------------------------CeEEEEEeCCCCC
Confidence 99863 1 11111 0 1 1 246778 335555 6654
Q ss_pred CeeEEEeecc----hhhhhccceeEEEEEcCc
Q 041358 179 KRAWFVHCHL----DHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 179 pG~W~~HCHi----~~H~~~Gm~~~~~v~~~~ 206 (226)
+|.+.||||. ..+...||...|+|.++.
T Consensus 142 ~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~ 173 (481)
T 3zx1_A 142 AGTYWYHPHPHYTASKQVFMGLAGAFVIKAKK 173 (481)
T ss_dssp CEEEEEECCCTTTHHHHHHTTCCEEEEEECSS
T ss_pred CceEEEeecCCCcchhhhhccceEEEEEcCcc
Confidence 7999999997 568889999999998754
No 73
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=97.92 E-value=3.5e-05 Score=56.47 Aligned_cols=82 Identities=13% Similarity=0.133 Sum_probs=54.1
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+| .|.+ ...|.+|+++..+. .|. +... . ...++.+.+.+|.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p---~g~---~~~~----~----~~~~~~~~~~~G~---------- 68 (99)
T 1byp_A 18 DLSIASGEKITF--KNNA---GFPHNDLFDKKEVP---AGV---DVTK----I----SMPEEDLLNAPGE---------- 68 (99)
T ss_dssp EEEECTTEEEEE--EECS---SCCBCCEECTTSSC---TTC---CHHH----H----SCCTTCCBCSTTC----------
T ss_pred EEEECCCCEEEE--EECC---CCcceEEEeCCCCc---ccc---cccc----c----cccccceeeCCCC----------
Confidence 678999999877 5763 56899998875430 110 0000 0 0113556777882
Q ss_pred ccchhhhhhhccccceeEEEEEeCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 153 ITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
. ..+ ..+.||.|.|||+ .|...||...++|+
T Consensus 69 ----------------~-~~~-~f~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 69 ----------------E-YSV-TLTEKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp ----------------E-EEE-EECSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred ----------------E-EEE-EeCCCcEEEEEcC--CccccCCEEEEEEC
Confidence 2 333 3459999999999 79999999998873
No 74
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=97.87 E-value=2e-05 Score=73.31 Aligned_cols=84 Identities=13% Similarity=0.168 Sum_probs=64.1
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|+.|+|.+.|. ....+.+|.||.... ....| . |. ..|+||
T Consensus 39 ~i~~~~Gd~v~v~~~N~---l~~~tsiHwHG~~~~--~~~DG--------~------~~----~~i~PG----------- 84 (448)
T 3aw5_A 39 TIILRRGQRVDMTLKNK---LTEPTIVHWHGFDVN--WHNDA--------H------PS----FAITPG----------- 84 (448)
T ss_dssp EEEEETTCEEEEEEEEC---SSSCBCEEEETCCCC--HHHHT--------C------GG----GCBCTT-----------
T ss_pred eEEEeCCCEEEEEEEEC---CCCceeEEeCCccCC--CccCC--------C------CC----ccCCCC-----------
Confidence 78999999999999998 368899999997531 10011 0 11 346788
Q ss_pred ccchhhhhhhccccceeEEEEE-eCC-CCeeEEEeec----chhhhhccceeEEEEEcCc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCH-KKRAWFVHCH----LDHHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~ad-npG~W~~HCH----i~~H~~~Gm~~~~~v~~~~ 206 (226)
+...-+ .++ .+|.+.|||| ...+...||...|+|.++.
T Consensus 85 ----------------~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~ 128 (448)
T 3aw5_A 85 ----------------ESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSG 128 (448)
T ss_dssp ----------------CEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTT
T ss_pred ----------------CEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCc
Confidence 445556 666 7999999999 7789999999999998754
No 75
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=97.83 E-value=2.5e-05 Score=72.31 Aligned_cols=78 Identities=9% Similarity=0.118 Sum_probs=62.0
Q ss_pred eEEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCC
Q 041358 72 SVKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCP 151 (226)
Q Consensus 72 ~~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~ 151 (226)
..+.++.| +++|+|.|.+ ....+.||++||.|++++...+. +..|...|++.|.+|+
T Consensus 188 p~l~v~~g-~~RlRliN~~--~~~~~~~~i~gh~~~vi~~DG~~-----------~~~p~~~~~l~l~pge--------- 244 (439)
T 2xu9_A 188 PTLVAQKA-TLRLRLLNAS--NARYYRLALQDHPLYLIAADGGF-----------LEEPLEVSELLLAPGE--------- 244 (439)
T ss_dssp CEEECSSS-EEEEEEEECC--SSCCEEEEETTBCEEEEEETTEE-----------EEEEEEESCEEECTTC---------
T ss_pred CcEEecCC-eEEEEEEecC--CCceEEEEECCceEEEEecCCCC-----------CCCceEeceEEECCce---------
Confidence 47889999 9999999986 46679999999999999875221 1246778999999993
Q ss_pred cccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchh
Q 041358 152 KITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDH 190 (226)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~ 190 (226)
. +.+. .++++|.|.++|+...
T Consensus 245 -----------------R-~dv~v~~~~~G~~~l~~~~~~ 266 (439)
T 2xu9_A 245 -----------------R-AEVLVRLRKEGRFLLQALPYD 266 (439)
T ss_dssp -----------------E-EEEEEECCSSEEEEEEEECCC
T ss_pred -----------------e-EEEEEEcCCCceEEEEecccc
Confidence 3 4444 7778999999998544
No 76
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.81 E-value=7.2e-05 Score=60.19 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=29.8
Q ss_pred eEEEEE-eCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 169 AWVLTD-TCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 169 ~~~~ir-~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
+...+. .+ .||.+.||||+.-|...||...++|+
T Consensus 120 gt~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 120 GYTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred eEEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 356777 78 99999999999999999999999873
No 77
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=97.78 E-value=6.4e-05 Score=55.34 Aligned_cols=83 Identities=18% Similarity=0.223 Sum_probs=53.1
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCC-CCCCCccccccCCCCCCCc-cceEEcCCCCCCCCCCCC
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGF-GNFDRAKDAKRFNFVEPSL-QNTIMVPKNVNGPKTFKC 150 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~-g~~~~~~~~~~~n~~~p~~-rDtv~v~~~~~~~~~~~~ 150 (226)
.+.++.|++|+|+ |.+ ...|.++++.- .+. +.|..... .+.+ .+.+.+.+|+
T Consensus 18 ~i~v~~G~tV~~~--n~~---~~~H~~~~~~~------~~~~~~~~~~~~-------~~~~~~~~~~~~pG~-------- 71 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVG---ETGHNIVFDIP------AGAPGTVASELK-------AASMDENDLLSEDEP-------- 71 (102)
T ss_dssp EEEECTTCCEEEE--ECS---SSCBCCEECCC------TTCCHHHHHHHH-------HTSCCTTCCBBTTBC--------
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCc------ccccccccchhh-------cccccccceecCCCC--------
Confidence 6889999999876 663 56798887721 110 00000000 0112 3556677772
Q ss_pred CcccchhhhhhhccccceeEEEEEeCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 151 PKITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~ir~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
. ..+ ..+.||.|.|||+ .|...||...++|+
T Consensus 72 ------------------~-~~~-tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 72 ------------------S-FKA-KVSTPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp ------------------E-EEE-CCCSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred ------------------E-EEE-EeCCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 2 233 4589999999999 89999999999873
No 78
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=97.70 E-value=6.3e-05 Score=72.76 Aligned_cols=94 Identities=14% Similarity=0.184 Sum_probs=59.0
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCC-CccceEEcCCCCCCCCCCCCC
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEP-SLQNTIMVPKNVNGPKTFKCP 151 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p-~~rDtv~v~~~~~~~~~~~~~ 151 (226)
+++++.|++|+|+|.|. ....+.+|.||.....-..|.- + .. ..| ..+....|+||+
T Consensus 70 ~I~~~~Gd~v~v~~~N~---l~~~~siH~HGl~~~~~~DG~~-~--------~~-~~~~~~~~~~~I~PG~--------- 127 (647)
T 1sdd_B 70 VIRAEVDDVIQVRFKNL---ASRPYSLHAHGLSYEKSSEGKT-Y--------ED-DSPEWFKEDNAIQPNK--------- 127 (647)
T ss_dssp CEEEETTCEEEEEECCC---SSSCBCCEEETCC-------------------------------CCBCTTC---------
T ss_pred eEEEeCCCEEEEEEEEC---CCCceEEecCcceeCCCCCCcc-c--------cC-CCCcccccCcccCCCC---------
Confidence 79999999999999998 3678999999987532111100 0 00 001 111233577882
Q ss_pred cccchhhhhhhccccceeEEEEE-eCCC------Ce----eEEEeecch--hhhhccceeEEEEEcCc
Q 041358 152 KITCHEQALIHMNMCLHAWVLTD-TCHK------KR----AWFVHCHLD--HHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~ir-~adn------pG----~W~~HCHi~--~H~~~Gm~~~~~v~~~~ 206 (226)
...-+ .++. +| .|.||||.. .|...||...|+|.++.
T Consensus 128 ------------------~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~ 177 (647)
T 1sdd_B 128 ------------------TYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKG 177 (647)
T ss_dssp ------------------CEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTT
T ss_pred ------------------eEEEEEECCcccCCCCCCCCceEEEEccCCCCcccccccCccCEEEeeCC
Confidence 23334 4443 68 999999994 57889999999998754
No 79
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=97.69 E-value=2.5e-05 Score=77.61 Aligned_cols=87 Identities=13% Similarity=0.054 Sum_probs=64.2
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|++|+|+|.|. ....+.+|.||..+..... .|. |.- ...|+||
T Consensus 200 ~Ir~~~GD~v~v~~~N~---l~~~~siH~HG~~~~~~~~-dG~--------------~~~--~~~I~PG----------- 248 (770)
T 2r7e_B 200 YIRAEVEDNIMVTFRNQ---ASRPYSFYSSLISYEEDQR-QGA--------------EPR--KNFVKPN----------- 248 (770)
T ss_dssp CCCCCSSSCEEEEEECC---SSSCCCCCBTTCCCCCCSS-SCT--------------TTT--SSCCCSS-----------
T ss_pred eEEEEcCCEEEEEEEEC---CCCCcceeecccccccccC-CCC--------------cCc--cCccCCC-----------
Confidence 68899999999999998 4678999999987643221 010 100 1246777
Q ss_pred ccchhhhhhhccccceeEEEEE-eCC----------CCeeEEEeecchh--hhhccceeEEEEEcCc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCH----------KKRAWFVHCHLDH--HQSWAMQMAFIVKNDR 206 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~ad----------npG~W~~HCHi~~--H~~~Gm~~~~~v~~~~ 206 (226)
....-+ .+. .+|.|.||||... |...||...|+|.+..
T Consensus 249 ----------------~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~GL~G~liV~~~~ 299 (770)
T 2r7e_B 249 ----------------ETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSGLIGPLLVCHTN 299 (770)
T ss_dssp ----------------CEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHTSCCEEEEEECST
T ss_pred ----------------CeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhCCceeeEEECCCc
Confidence 335566 665 7899999999877 7889999999998753
No 80
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.64 E-value=0.00024 Score=68.67 Aligned_cols=75 Identities=11% Similarity=0.201 Sum_probs=55.0
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|+.|+|++.|.+......|.|+++++.+. ..+.||
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------------------~~i~PG----------- 554 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------------------MEIGPQ----------- 554 (595)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTT-----------
T ss_pred EEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------------------eeeCCC-----------
Confidence 78899999999999996321234677777664211 356777
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecc---hhhhhccceeEEEEEc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHL---DHHQSWAMQMAFIVKN 204 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi---~~H~~~Gm~~~~~v~~ 204 (226)
....+. .++.||.|.||||. ..|. ||...++|.+
T Consensus 555 ----------------~t~t~~Fta~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p 592 (595)
T 1fwx_A 555 ----------------MTSSVTFVAANPGVYWYYCQWFCHALHM--EMRGRMLVEP 592 (595)
T ss_dssp ----------------CEEEEEEECCSCEEEEEECCSCCSTTCT--TCEEEEEEEC
T ss_pred ----------------CeEEEEEECCCCEEEEEECCCCCCCCcc--CCEEEEEEEc
Confidence 334555 78999999999993 4665 9999999975
No 81
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=97.60 E-value=0.00014 Score=53.22 Aligned_cols=82 Identities=13% Similarity=0.159 Sum_probs=53.2
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+| .|.+ ...|.++++...+ ..|...+ ... ...+.+.+.+|.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~---p~~~~~~-------~~~----~~~~~~~~~~G~---------- 68 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNA---GFPHNIVFDEDSI---PSGVDAS-------KIS----MSEEDLLNAKGE---------- 68 (99)
T ss_dssp EEEECTTCEEEE--EECS---SCCBCCEECTTSS---CTTCCHH-------HHC----CCTTCCBCSTTC----------
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCC---ccccccc-------ccc----cccCccccCCCC----------
Confidence 788999999877 5763 5689888886432 0110000 000 112445677772
Q ss_pred ccchhhhhhhccccceeEEEEEeCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 153 ITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
. ..+ ..+.||.|.|+|+ -|...||...++|+
T Consensus 69 ----------------~-~~~-tf~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 69 ----------------T-FEV-ALSNKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp ----------------E-EEE-ECCSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred ----------------E-EEE-EECCCceEEEEcC--CCcccCCEEEEEEC
Confidence 2 333 4569999999999 79999999998873
No 82
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=97.47 E-value=0.0002 Score=68.19 Aligned_cols=84 Identities=14% Similarity=0.188 Sum_probs=60.5
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
+++++.|+.|+|.+.|. ....+.+|+||... . +..|.. | .+ .|+||
T Consensus 70 tI~~~~Gd~v~v~v~N~---l~~~tsiHwHGl~~---~---~~~DG~----------~--~~--~i~PG----------- 115 (534)
T 3abg_A 70 TFQVPRGVETVVRFINN---AEAPNSVHLHGSFS---R---AAFDGW----------A--ED--ITEPG----------- 115 (534)
T ss_dssp EEEEETTCCEEEEEEEC---SSSCBCEEEETCCC---C---TTTTTC----------S--SS--CBSSC-----------
T ss_pred eEEEeCCcEEEEEEEEC---CCCCceEEECCCcC---C---CCCCCC----------C--CC--CCCCC-----------
Confidence 79999999999999998 36789999999742 1 111110 1 01 26778
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCC-CeeEEEeecchh----hhhccceeEEEEEcCc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHK-KRAWFVHCHLDH----HQSWAMQMAFIVKNDR 206 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adn-pG~W~~HCHi~~----H~~~Gm~~~~~v~~~~ 206 (226)
+...-+ .++. +|.+.||||... |...||...|+|.++.
T Consensus 116 ----------------~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~ 159 (534)
T 3abg_A 116 ----------------SFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPA 159 (534)
T ss_dssp ----------------SCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTT
T ss_pred ----------------CeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCc
Confidence 223445 6665 589999999864 6779999999998754
No 83
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.29 E-value=0.00077 Score=50.16 Aligned_cols=72 Identities=18% Similarity=0.248 Sum_probs=47.2
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|++|+|+ |.+ ...|.+|.++-. .|. +.+ +.-.+.+|
T Consensus 34 ~i~v~~Gd~V~~~--N~d---~~~H~v~~~~~~-------~g~--------------~~~-~~~~~~pG----------- 75 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NRE---AMPHNVHFVAGV-------LGE--------------AAL-KGPMMKKE----------- 75 (105)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS--------------SCE-ECCCBCTT-----------
T ss_pred EEEECCCCEEEEE--ECC---CCCEEEEEcCCC-------CCc--------------ccc-cccccCCC-----------
Confidence 7889999999885 763 567888887521 111 001 11135677
Q ss_pred ccchhhhhhhccccceeEEEEEeCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 153 ITCHEQALIHMNMCLHAWVLTDTCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
.-..+ ..+.||.+.|||++ |. ||...++|+
T Consensus 76 ----------------~~~~~-tf~~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 76 ----------------QAYSL-TFTEAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp ----------------EEEEE-EECSCEEEEEECSS--CT--TCEEEEEEC
T ss_pred ----------------CEEEE-EeCCCEEEEEEeCC--CC--CCEEEEEEC
Confidence 21222 44799999999998 54 999988873
No 84
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=97.13 E-value=0.0022 Score=62.12 Aligned_cols=38 Identities=16% Similarity=0.347 Sum_probs=30.6
Q ss_pred eEEEEE-eCC-CCeeEEEeecchh----hhhccceeEEEEEcCc
Q 041358 169 AWVLTD-TCH-KKRAWFVHCHLDH----HQSWAMQMAFIVKNDR 206 (226)
Q Consensus 169 ~~~~ir-~ad-npG~W~~HCHi~~----H~~~Gm~~~~~v~~~~ 206 (226)
+....+ .++ .+|.+.||||... |...||...|+|.++.
T Consensus 153 ~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~ 196 (612)
T 2g23_A 153 DAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDE 196 (612)
T ss_dssp CEEEEEECCCSCSCEEEEEECCTTTHHHHTTTTCEEEEEEECHH
T ss_pred CeEEEEEEecCCCceEEEecccCCcchhhhhccceeEEEEcCcc
Confidence 445666 665 6999999999865 8889999999998754
No 85
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=97.06 E-value=0.00073 Score=63.73 Aligned_cols=35 Identities=11% Similarity=0.158 Sum_probs=27.7
Q ss_pred EEE-eCC-CCeeEEEeecch----hhhhccceeEEEEEcCc
Q 041358 172 LTD-TCH-KKRAWFVHCHLD----HHQSWAMQMAFIVKNDR 206 (226)
Q Consensus 172 ~ir-~ad-npG~W~~HCHi~----~H~~~Gm~~~~~v~~~~ 206 (226)
.-+ .++ .+|.+.||||.. .|...||...|+|.++.
T Consensus 138 ~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~ 178 (513)
T 2wsd_A 138 VYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPK 178 (513)
T ss_dssp EEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGG
T ss_pred EEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccc
Confidence 334 554 699999999985 37789999999998754
No 86
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=96.79 E-value=0.0099 Score=56.33 Aligned_cols=31 Identities=6% Similarity=0.054 Sum_probs=26.9
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceE
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSF 106 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f 106 (226)
+++++.|+.|+|.+.|. -...+.+|.||...
T Consensus 66 ti~~~~Gd~v~v~~~N~---L~~~~~~h~hg~~~ 96 (612)
T 3gyr_A 66 TIEVRRGQRVRIAWTNR---IPKGSEYPVTSVEV 96 (612)
T ss_dssp EEEEETTCCEEEEEEEC---CCTTCCCSEEEEEE
T ss_pred EEEEeCCcEEEEEEEEC---CCCCcccccccccc
Confidence 79999999999999997 36788899999754
No 87
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=96.39 E-value=0.021 Score=41.52 Aligned_cols=27 Identities=22% Similarity=0.320 Sum_probs=23.3
Q ss_pred eCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 175 TCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 175 ~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
..+.||.+.|+|-+ |...||...++|+
T Consensus 72 tf~~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 72 KLSTPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp ECCSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred EcCCCEEEEEEchh--hccCCCEEEEEEC
Confidence 45899999999986 9989999988873
No 88
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=96.16 E-value=0.013 Score=45.65 Aligned_cols=29 Identities=24% Similarity=0.349 Sum_probs=25.8
Q ss_pred eCCCCeeEEEeecchhhhhccceeEEEEEcC
Q 041358 175 TCHKKRAWFVHCHLDHHQSWAMQMAFIVKND 205 (226)
Q Consensus 175 ~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~ 205 (226)
+.+.||.+.|+|- .|...||...++|.+.
T Consensus 69 TF~~pG~y~y~C~--~H~~~GM~G~I~V~~~ 97 (127)
T 3tu6_A 69 TLSKPGVYMYQCA--PHVGMGMIGAIVVGEP 97 (127)
T ss_dssp ECCSCEEEEEECT--TTGGGTCEEEEEESSC
T ss_pred EeCCCeEEEEEeC--CCCcCCcEEEEEECcC
Confidence 4589999999999 6999999999999864
No 89
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=95.83 E-value=0.026 Score=43.76 Aligned_cols=29 Identities=17% Similarity=0.321 Sum_probs=25.6
Q ss_pred eCCCCeeEEEeecchhhhhccceeEEEEEcC
Q 041358 175 TCHKKRAWFVHCHLDHHQSWAMQMAFIVKND 205 (226)
Q Consensus 175 ~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~~ 205 (226)
+.+.||.+.|+|- .|...||...++|.++
T Consensus 68 TF~~~G~y~Y~C~--~H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 68 NAEKEGLYVLKCA--PHYGMGMVVLVQVGKP 96 (124)
T ss_dssp ECCSSEEEEEECT--TTGGGTCEEEEEESSC
T ss_pred EeCCCeEEEEEcC--CCCcCCCEEEEEECCC
Confidence 5689999999995 8999999999999753
No 90
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=95.75 E-value=0.034 Score=41.20 Aligned_cols=25 Identities=24% Similarity=0.337 Sum_probs=20.7
Q ss_pred eCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 175 TCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 175 ~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
..+.||.+.|+|-+ |. ||...++|+
T Consensus 82 tf~~~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 82 TFNEAGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp EECSCEEEEEECSS--CT--TCEEEEEEC
T ss_pred EeCCCEEEEEEeCC--CC--CCEEEEEEC
Confidence 34799999999987 65 999988873
No 91
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=95.75 E-value=0.026 Score=43.57 Aligned_cols=28 Identities=21% Similarity=0.213 Sum_probs=25.3
Q ss_pred eCCCCeeEEEeecchhhhhccceeEEEEEc
Q 041358 175 TCHKKRAWFVHCHLDHHQSWAMQMAFIVKN 204 (226)
Q Consensus 175 ~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~ 204 (226)
+.+.||.+.|+|- .|...||...++|.+
T Consensus 67 TF~~pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 67 TVTEPGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp EECSCEEEEEECG--GGTTTTCEEEEEESS
T ss_pred EeCCCeEEEEEeC--CCCcCCcEEEEEECC
Confidence 4489999999999 799999999999985
No 92
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=95.22 E-value=0.061 Score=41.62 Aligned_cols=25 Identities=24% Similarity=0.337 Sum_probs=20.7
Q ss_pred eCCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 175 TCHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 175 ~adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
..+.||.+.|+|-+ |. ||...++|+
T Consensus 108 tF~~~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 108 TFNEAGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp EECSCEEEEEECSS--CT--TCEEEEEEC
T ss_pred EcCCCEEEEEEeCC--Cc--CCEEEEEEC
Confidence 34799999999987 65 999988873
No 93
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.78 E-value=0.18 Score=48.88 Aligned_cols=77 Identities=10% Similarity=0.113 Sum_probs=52.5
Q ss_pred EEEeecCCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCCccccccCCCCCCCccceEEcCCCCCCCCCCCCCc
Q 041358 73 VKVLEYNTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDRAKDAKRFNFVEPSLQNTIMVPKNVNGPKTFKCPK 152 (226)
Q Consensus 73 ~~~~~~g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~~~~~~~~n~~~p~~rDtv~v~~~~~~~~~~~~~~ 152 (226)
.+.++.|+.|+|++.|.+......|.|-+.++.. -+.+.||
T Consensus 559 eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI----------------------------K~DaiPG----------- 599 (638)
T 3sbq_A 559 EFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV----------------------------SMEISPQ----------- 599 (638)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------------------------EEEECTT-----------
T ss_pred EEEEecCceeEEEEecCCcCCCceeeeEecCCCc----------------------------eeeeCCC-----------
Confidence 6789999999999999632124556554433211 1246667
Q ss_pred ccchhhhhhhccccceeEEEEE-eCCCCeeEEEeecchhhhh-ccceeEEEEEc
Q 041358 153 ITCHEQALIHMNMCLHAWVLTD-TCHKKRAWFVHCHLDHHQS-WAMQMAFIVKN 204 (226)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ir-~adnpG~W~~HCHi~~H~~-~Gm~~~~~v~~ 204 (226)
....+. .++.||.+.++|...-|.. .+|...++|++
T Consensus 600 ----------------rtnsvtFtadkPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 600 ----------------QTSSITFVADKPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp ----------------CEEEEEEECCSCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred ----------------CeEEEEEEcCCCEEEEEECCCcCCCCcccceEEEEEec
Confidence 224445 7899999999999765543 57999998874
No 94
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=94.68 E-value=0.16 Score=38.95 Aligned_cols=28 Identities=25% Similarity=0.415 Sum_probs=24.9
Q ss_pred eCCCCeeEEEeecchhhhhccceeEEEEEc
Q 041358 175 TCHKKRAWFVHCHLDHHQSWAMQMAFIVKN 204 (226)
Q Consensus 175 ~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~ 204 (226)
+.+.||.+.|+|- .|...||...++|.+
T Consensus 67 tF~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 67 TVTQPGAYLVKCT--PHYAMGMIALIAVGD 94 (123)
T ss_dssp ECCSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred EeCCCEEEEEEeC--CcccCCCEEEEEEcC
Confidence 4579999999997 599999999999975
No 95
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=94.32 E-value=0.16 Score=38.88 Aligned_cols=28 Identities=18% Similarity=0.280 Sum_probs=24.8
Q ss_pred eCCCCeeEEEeecchhhhhccceeEEEEEc
Q 041358 175 TCHKKRAWFVHCHLDHHQSWAMQMAFIVKN 204 (226)
Q Consensus 175 ~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~ 204 (226)
+.+.||.+.|+|- .|...||...++|.+
T Consensus 67 tF~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 67 KFDKEGVYGFKCA--PHYMMGMVALVVVGD 94 (123)
T ss_dssp ECCSCEEEEEECS--TTTTTTCEEEEEESS
T ss_pred EeCCCeEEEEEeC--CccccCCEEEEEEcC
Confidence 4578999999998 599999999999975
No 96
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=93.96 E-value=0.19 Score=40.86 Aligned_cols=28 Identities=11% Similarity=0.141 Sum_probs=24.5
Q ss_pred eCC--CCeeEEEeecchhhhhccceeEEEEE
Q 041358 175 TCH--KKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 175 ~ad--npG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
.++ .||.+-|+|-+--|.. ||...|+|.
T Consensus 137 ~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 137 DPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred ecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 455 8999999999999988 899999885
No 97
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=93.85 E-value=0.53 Score=36.62 Aligned_cols=30 Identities=20% Similarity=0.244 Sum_probs=23.4
Q ss_pred EEE-eCCCCeeEEEeecc---hhhhhccceeEEEEE
Q 041358 172 LTD-TCHKKRAWFVHCHL---DHHQSWAMQMAFIVK 203 (226)
Q Consensus 172 ~ir-~adnpG~W~~HCHi---~~H~~~Gm~~~~~v~ 203 (226)
.+. .++.||.+.+.|.. ..| .+|...++|.
T Consensus 101 ~~~~~~~~~G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 101 TVRYTFKRPGEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EEEEECCSCEEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred EEEEEcCCCEEEEEECcccCCCCc--CCCEEEEEEE
Confidence 444 78999999999976 556 4888888774
No 98
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=92.99 E-value=0.64 Score=35.90 Aligned_cols=26 Identities=23% Similarity=0.346 Sum_probs=23.3
Q ss_pred CCCeeEEEeecchhhhhccceeEEEEE
Q 041358 177 HKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 177 dnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
..||.+-|.|-+--|.. ||...+.|.
T Consensus 103 ~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 103 SKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 38999999999988988 899999885
No 99
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=89.16 E-value=3.6 Score=33.22 Aligned_cols=32 Identities=16% Similarity=0.147 Sum_probs=24.1
Q ss_pred EEE-eCCCCeeEEEeecch-hhhhccceeEEEEE
Q 041358 172 LTD-TCHKKRAWFVHCHLD-HHQSWAMQMAFIVK 203 (226)
Q Consensus 172 ~ir-~adnpG~W~~HCHi~-~H~~~Gm~~~~~v~ 203 (226)
.+. .++.||.+.+.|... -+...+|...++|+
T Consensus 134 ~~~~~~~kpG~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 134 TVRYTFKRPGEYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EEEEECCSCEEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred EEEEEeCCCEEEEEECCcCCCCCcCCCEEEEEEe
Confidence 344 789999999999853 34456888888775
No 100
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=88.43 E-value=1.3 Score=33.56 Aligned_cols=26 Identities=23% Similarity=0.212 Sum_probs=21.7
Q ss_pred eCCCCeeEEEeecchhhhhccceeEEEEEc
Q 041358 175 TCHKKRAWFVHCHLDHHQSWAMQMAFIVKN 204 (226)
Q Consensus 175 ~adnpG~W~~HCHi~~H~~~Gm~~~~~v~~ 204 (226)
+.+.||.+.|+|-+ |.. |...++|.+
T Consensus 67 tF~~~G~y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 67 TFTAPGVYGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EECSCEEEEEEETT--EEE--EEEEEEESS
T ss_pred EeCCCEEEEEEeCC--Ccc--CEEEEEEeC
Confidence 44799999999987 655 999999975
No 101
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=88.23 E-value=2.7 Score=32.31 Aligned_cols=28 Identities=11% Similarity=0.204 Sum_probs=22.6
Q ss_pred eCC--CCee-EEEeecchhhhhccceeEEEEE
Q 041358 175 TCH--KKRA-WFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 175 ~ad--npG~-W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
.++ .||. +-|.|-+--|.. ||...+.|.
T Consensus 98 ~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 98 DVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp EGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 454 5654 999999998988 899999885
No 102
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=86.44 E-value=2.8 Score=32.17 Aligned_cols=25 Identities=20% Similarity=0.285 Sum_probs=21.1
Q ss_pred CCee-EEEeecchhhhhccceeEEEEE
Q 041358 178 KKRA-WFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 178 npG~-W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
.||. +-|.|-+--|.. ||...+.|+
T Consensus 103 ~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 103 AAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp CTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred CCCceEEEEECCCChhH-CCEEEEEEC
Confidence 6765 999999999988 899988773
No 103
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=86.41 E-value=3.8 Score=31.44 Aligned_cols=28 Identities=18% Similarity=0.269 Sum_probs=23.7
Q ss_pred eCC--CCe-eEEEeecchhhhhccceeEEEEE
Q 041358 175 TCH--KKR-AWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 175 ~ad--npG-~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
.+. .|| .+-|.|-+--|.. ||...+.|.
T Consensus 97 ~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 97 DVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp ESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred eccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 555 788 5999999999988 999999885
No 104
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=78.25 E-value=6.3 Score=30.37 Aligned_cols=95 Identities=13% Similarity=0.199 Sum_probs=51.5
Q ss_pred EEEeec-CCEEEEEEEcCCCCCCcCcceeecCceEEEEecCCCCCCC------cccc-cc-CC-CCCCCccceEEcCCCC
Q 041358 73 VKVLEY-NTAVEIVFQGTDLLAGTDHPMHLHGYSFYVVGGGFGNFDR------AKDA-KR-FN-FVEPSLQNTIMVPKNV 142 (226)
Q Consensus 73 ~~~~~~-g~~v~iv~~n~~~~~~~~HP~HlHG~~f~vv~~g~g~~~~------~~~~-~~-~n-~~~p~~rDtv~v~~~~ 142 (226)
.+.++. |+.|+|+|.|.+. . |--.=||.|-+...+ ..+. ...+ .. +. -+...+..|.+|.||+
T Consensus 19 ~i~V~~~Ge~V~~~l~N~G~---~--p~~~M~Hn~Vl~~~~--~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGe 91 (125)
T 3fsa_A 19 AITVDKSCKQFTVNLSHPGN---L--PKNVMGHNWVLSTAA--DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGE 91 (125)
T ss_dssp EEEECTTCSEEEEEEECCSS---C--CHHHHCBCCEEEEHH--HHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTC
T ss_pred EEEEecCCCEEEEEEEECCc---c--cccccCceEEEcccc--hHHHHHHHHHhcChhhccCCCCCccceeccceeCCCc
Confidence 677875 9999999999852 2 111113454443221 0000 0000 01 11 1223455677789993
Q ss_pred CCCCCCCCCcccchhhhhhhccccceeEEEEEe--CCCCeeEEEeecchhhhhccceeEEEEE
Q 041358 143 NGPKTFKCPKITCHEQALIHMNMCLHAWVLTDT--CHKKRAWFVHCHLDHHQSWAMQMAFIVK 203 (226)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~--adnpG~W~~HCHi~~H~~~Gm~~~~~v~ 203 (226)
+ .-+.+.. ...||.+-|-|- -|. ||...+.|+
T Consensus 92 ---------------s----------~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 92 ---------------K----------DSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp ---------------E----------EEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred ---------------E----------EEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 2 3344442 238999999999 777 999988773
No 105
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=60.79 E-value=5.4 Score=28.22 Aligned_cols=27 Identities=19% Similarity=0.352 Sum_probs=21.8
Q ss_pred EEeccCceEEEEEEeCCCCCeeEEEEE
Q 041358 2 LTISPGQIIDVLIKANQIPNKYYMSAK 28 (226)
Q Consensus 2 l~I~pGQRydVLV~a~~~pg~Y~ira~ 28 (226)
+.|.||+++++-++++..+|.||....
T Consensus 64 ~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 64 LMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp EECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred cccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 468999999998887556899987654
No 106
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=48.22 E-value=6.5 Score=27.93 Aligned_cols=26 Identities=23% Similarity=0.367 Sum_probs=20.4
Q ss_pred EeccCceEEEEEEeCCCCCeeEEEEE
Q 041358 3 TISPGQIIDVLIKANQIPNKYYMSAK 28 (226)
Q Consensus 3 ~I~pGQRydVLV~a~~~pg~Y~ira~ 28 (226)
.|.+||++++-++++..||.||..-.
T Consensus 66 ~~~pG~~~~~~f~~~~~~G~y~y~C~ 91 (106)
T 2gim_A 66 LMSPGQSTSTTFPADAPAGEYTFYCE 91 (106)
T ss_dssp CCSTTCEEEEECCTTCCSEEEEEECT
T ss_pred eeCCCCEEEEEEecCCCCceEEEEeC
Confidence 57899999997776456899987643
No 107
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=46.94 E-value=17 Score=26.10 Aligned_cols=27 Identities=11% Similarity=0.235 Sum_probs=21.1
Q ss_pred EEeccCceEEEEEEeCCCCCeeEEEEEe
Q 041358 2 LTISPGQIIDVLIKANQIPNKYYMSAKA 29 (226)
Q Consensus 2 l~I~pGQRydVLV~a~~~pg~Y~ira~~ 29 (226)
..+.||+++++-+++++ ||.|+.....
T Consensus 71 ~~i~pG~~~~~~f~~~~-~G~y~~~C~~ 97 (112)
T 1iby_A 71 EVIKAGETKTISFTADK-AGAFTIWCQL 97 (112)
T ss_dssp EEECTTCEEEEEEECCS-CEEEEEBCSS
T ss_pred eEeCCCCEEEEEEECCC-CEEEEEECCC
Confidence 46889999999998864 7999865543
No 108
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=44.52 E-value=15 Score=27.99 Aligned_cols=25 Identities=20% Similarity=0.216 Sum_probs=20.5
Q ss_pred EeccCceEEEEEEeC--CCCCeeEEEE
Q 041358 3 TISPGQIIDVLIKAN--QIPNKYYMSA 27 (226)
Q Consensus 3 ~I~pGQRydVLV~a~--~~pg~Y~ira 27 (226)
.|.|||++++.++++ ..||.|+..-
T Consensus 86 ~l~pGet~svtf~~~~~~~~G~Y~f~C 112 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVSALSKDEAYTYFC 112 (129)
T ss_dssp CBCTTCEEEEEEEGGGCCTTSCEEEEC
T ss_pred EECCCCEEEEEEeccccCCCceEEEEe
Confidence 478999999999986 3589998644
No 109
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=41.39 E-value=1.2e+02 Score=25.06 Aligned_cols=32 Identities=9% Similarity=0.003 Sum_probs=22.3
Q ss_pred EEE-eCCCCeeEEEeecchhhhh-ccceeEEEEE
Q 041358 172 LTD-TCHKKRAWFVHCHLDHHQS-WAMQMAFIVK 203 (226)
Q Consensus 172 ~ir-~adnpG~W~~HCHi~~H~~-~Gm~~~~~v~ 203 (226)
.+. .++.||.+...|-..-... ..|...+++.
T Consensus 82 ~l~~~~~~pG~y~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 82 RLHLIANEPGTYDGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp EEEECCSSSEEEEEEECSCCSTTSTTCCEEEEEE
T ss_pred EEEEEeCCCeEEEEEcccccccchhhceEEEEEE
Confidence 344 7899999999998665433 3566666665
No 110
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=33.65 E-value=28 Score=26.43 Aligned_cols=25 Identities=16% Similarity=0.173 Sum_probs=19.3
Q ss_pred EeccCceEEEEEEeC--CCCCeeEEEE
Q 041358 3 TISPGQIIDVLIKAN--QIPNKYYMSA 27 (226)
Q Consensus 3 ~I~pGQRydVLV~a~--~~pg~Y~ira 27 (226)
.|+|||++++.++++ ++.++|+..-
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C 112 (129)
T 2ccw_A 86 VIGGGESDSVTFDVSKIAAGENYAYFC 112 (129)
T ss_dssp CBCTTCEEEEEEEGGGSCTTCCEEEEC
T ss_pred EECCCCEEEEEEeccccCCCceEEEEe
Confidence 479999999999987 5445697543
No 111
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=31.73 E-value=1.9e+02 Score=25.16 Aligned_cols=33 Identities=9% Similarity=0.028 Sum_probs=22.6
Q ss_pred EEE-eCCCCeeEEEeecchhhh-hccceeEEEEEc
Q 041358 172 LTD-TCHKKRAWFVHCHLDHHQ-SWAMQMAFIVKN 204 (226)
Q Consensus 172 ~ir-~adnpG~W~~HCHi~~H~-~~Gm~~~~~v~~ 204 (226)
.+. .++.||.+...|...--. ...|...+++..
T Consensus 230 ~~~~~~~~~G~y~g~CsE~CG~~Hs~M~~~v~vvs 264 (298)
T 3hb3_B 230 QLWFSVDQEGVYFGQCSELCGINHAYMPIVVKAVS 264 (298)
T ss_dssp EEEEECSSSEEEEECCCSCCSTTTTSCCEEEEEEC
T ss_pred EEEEEeCCCEEEEEEcccccCcCccCCeeEEEEEc
Confidence 344 789999999999965432 345666666654
No 112
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=24.97 E-value=2.9e+02 Score=23.27 Aligned_cols=29 Identities=17% Similarity=0.169 Sum_probs=20.2
Q ss_pred eCCCCeeEEEeecchhhhh-ccceeEEEEE
Q 041358 175 TCHKKRAWFVHCHLDHHQS-WAMQMAFIVK 203 (226)
Q Consensus 175 ~adnpG~W~~HCHi~~H~~-~Gm~~~~~v~ 203 (226)
.++.||.+...|--.--.. ..|...+++.
T Consensus 216 ~~~~~G~y~g~Cse~CG~~H~~M~~~v~vv 245 (262)
T 2gsm_B 216 RAEREGIFFGQCSELCGISHAYMPITVKVV 245 (262)
T ss_dssp ECCSCEEEEECCCSCCSTTGGGCCEEEEEE
T ss_pred ecCCcEEEEEEChHhcccCcccCeEEEEEE
Confidence 7899999999998654332 3455555554
No 113
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=23.28 E-value=3.1e+02 Score=22.55 Aligned_cols=19 Identities=16% Similarity=0.315 Sum_probs=16.4
Q ss_pred eEEEeecCCEEEEEEEcCC
Q 041358 72 SVKVLEYNTAVEIVFQGTD 90 (226)
Q Consensus 72 ~~~~~~~g~~v~iv~~n~~ 90 (226)
+...++.|+.|++.+...+
T Consensus 140 n~lvlP~~~~Vr~~vtS~D 158 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED 158 (227)
T ss_dssp SCEEEETTSCEEEEEEESS
T ss_pred ceEEEecCCEEEEEEEeCc
Confidence 3688999999999999863
No 114
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=22.67 E-value=57 Score=24.59 Aligned_cols=24 Identities=21% Similarity=0.228 Sum_probs=18.1
Q ss_pred EeccCceEEEEEEeC--CCCCeeEEE
Q 041358 3 TISPGQIIDVLIKAN--QIPNKYYMS 26 (226)
Q Consensus 3 ~I~pGQRydVLV~a~--~~pg~Y~ir 26 (226)
.|+|||++++.+++. ++.++|+..
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~ 111 (128)
T 1nwp_A 86 VIGAGEKDSVTFDVSKLAAGEKYGFF 111 (128)
T ss_dssp CBCTTCEEEEEEEGGGSCTTSCEEEE
T ss_pred eeCCCCEEEEEEeccccCCCceEEEE
Confidence 479999999999986 433459753
No 115
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=21.88 E-value=2.1e+02 Score=19.89 Aligned_cols=23 Identities=22% Similarity=0.314 Sum_probs=15.4
Q ss_pred CCcCcceeecCce--EEEEecCCCC
Q 041358 93 AGTDHPMHLHGYS--FYVVGGGFGN 115 (226)
Q Consensus 93 ~~~~HP~HlHG~~--f~vv~~g~g~ 115 (226)
....-++|.|.+. +|++..|.+.
T Consensus 26 PG~~~~~H~H~~~~e~~~v~~G~~~ 50 (98)
T 3lag_A 26 PGSATGHHTHGMDYVVVPMADGEMT 50 (98)
T ss_dssp TTEECCSEECCSCEEEEESSCBC-C
T ss_pred CCCccCcEECCCcEEEEEEeccEEE
Confidence 3567899999875 5666666543
No 116
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=21.69 E-value=84 Score=23.37 Aligned_cols=31 Identities=10% Similarity=0.250 Sum_probs=26.6
Q ss_pred eCCCCeeEEEeecchhhhhccceeEE-EEEcC
Q 041358 175 TCHKKRAWFVHCHLDHHQSWAMQMAF-IVKND 205 (226)
Q Consensus 175 ~adnpG~W~~HCHi~~H~~~Gm~~~~-~v~~~ 205 (226)
..+.+|...|=|=...|=..||.+.+ .|...
T Consensus 75 ~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~ 106 (116)
T 1x9u_A 75 MLNTTGPQYYICTVGDHCRVGQKLSINVVGAG 106 (116)
T ss_dssp ECCSCEEEEEECCSTTTTTTTCEEEEEEECC-
T ss_pred EECCCCCEEEECCCCCccccCCEEEEEEECCC
Confidence 56789999999999999999999999 88654
No 117
>4b9x_A TDRD1, tudor domain-containing protein 1; replication; 2.80A {Mus musculus}
Probab=20.69 E-value=40 Score=27.66 Aligned_cols=27 Identities=15% Similarity=0.336 Sum_probs=23.0
Q ss_pred EEeccCceEEEEEEeCCCCCeeEEEEE
Q 041358 2 LTISPGQIIDVLIKANQIPNKYYMSAK 28 (226)
Q Consensus 2 l~I~pGQRydVLV~a~~~pg~Y~ira~ 28 (226)
+.+.+|+.++|.|+--..|+.||++..
T Consensus 11 ~~l~~~~~~~V~Vt~v~sP~~Fyvq~~ 37 (226)
T 4b9x_A 11 VEFTVDETVDVVVCMMYSPGEFYCHFL 37 (226)
T ss_dssp CCCCTTCEEEEEEEEEEETTEEEEEEC
T ss_pred EEcCCCCEEEEEEEEEeCCCEEEEEEc
Confidence 457899999999987677999999864
Done!