Query 041372
Match_columns 564
No_of_seqs 281 out of 2445
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 10:37:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041372.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041372hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 1E-113 4E-118 956.1 48.3 521 15-562 93-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 3E-104 9E-109 882.9 46.3 518 15-562 84-620 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 3.4E-74 1.2E-78 665.5 45.3 464 21-562 84-606 (926)
4 1y9z_A Alkaline serine proteas 100.0 1.6E-49 5.5E-54 426.2 24.0 336 15-441 55-437 (441)
5 3afg_A Subtilisin-like serine 100.0 3E-44 1E-48 392.6 19.4 229 17-421 172-419 (539)
6 3lxu_X Tripeptidyl-peptidase 2 100.0 1.1E-42 3.8E-47 400.9 24.5 346 20-560 267-651 (1354)
7 4h6x_A Thiazoline oxidase/subt 100.0 1.8E-43 6.1E-48 368.9 11.9 225 18-419 102-337 (357)
8 1gci_A Subtilisin; hydrolase, 100.0 4.3E-42 1.5E-46 344.6 18.2 213 18-419 55-269 (269)
9 1r0r_E Subtilisin carlsberg; h 100.0 9.7E-42 3.3E-46 343.2 17.6 213 18-419 56-274 (274)
10 1dbi_A AK.1 serine protease; h 100.0 1.8E-41 6.2E-46 342.1 19.4 214 17-419 64-279 (280)
11 1to2_E Subtilisin BPN'; serine 100.0 2.6E-41 8.9E-46 341.2 18.5 212 20-420 59-276 (281)
12 3zxy_A Subtilisin-like protein 100.0 2.7E-42 9.2E-47 348.9 11.2 222 20-419 46-274 (282)
13 3t41_A Epidermin leader peptid 100.0 2.2E-41 7.5E-46 366.5 15.3 220 17-420 193-465 (471)
14 2x8j_A Intracellular subtilisi 100.0 9.5E-41 3.3E-45 344.1 18.3 214 18-419 79-310 (327)
15 1thm_A Thermitase; hydrolase(s 100.0 1.9E-40 6.4E-45 334.7 19.3 214 17-419 63-278 (279)
16 1r6v_A Subtilisin-like serine 100.0 9.6E-41 3.3E-45 369.7 17.4 231 19-431 194-450 (671)
17 2z2z_A TK-subtilisin precursor 100.0 5.3E-41 1.8E-45 355.1 13.7 213 19-419 144-391 (395)
18 2iy9_A SUBA; toxin, shiga, pla 100.0 5.3E-41 1.8E-45 349.4 12.9 222 18-420 82-329 (347)
19 3lpc_A APRB2; protease, subtil 100.0 2E-40 7E-45 344.1 15.8 218 19-420 98-337 (340)
20 2ixt_A 36KDA protease; serine 100.0 1.4E-39 4.7E-44 333.6 20.2 228 18-414 64-309 (310)
21 4h6w_A N-terminal cyanobactin 100.0 1.9E-40 6.5E-45 339.4 11.3 224 18-419 57-287 (306)
22 2z30_A TK-subtilisin; thermoco 100.0 9E-40 3.1E-44 336.2 14.6 213 19-419 69-316 (320)
23 1wmd_A Protease; alpha-beta hy 100.0 3.6E-39 1.2E-43 345.4 16.8 233 18-421 61-319 (434)
24 2oxa_A Extracellular serine pr 100.0 5.6E-38 1.9E-42 348.9 20.8 270 6-420 95-425 (600)
25 2pwa_A Proteinase K; structure 100.0 5E-38 1.7E-42 316.6 15.2 189 17-386 61-259 (279)
26 1sh7_A Extracellular subtilisi 100.0 2.4E-37 8.4E-42 312.3 18.3 190 18-387 63-257 (284)
27 1p8j_A Furin precursor; prohor 100.0 9.5E-38 3.3E-42 337.4 15.1 235 18-420 80-330 (471)
28 2b6n_A Proteinase K; S binding 100.0 5.3E-37 1.8E-41 309.3 17.5 191 18-387 65-261 (278)
29 2id4_A Kexin; KEX2, kexin, fur 100.0 7.4E-37 2.5E-41 332.7 16.7 231 20-420 95-342 (503)
30 2qtw_B Proprotein convertase s 100.0 7.9E-37 2.7E-41 328.4 15.9 227 18-419 67-313 (546)
31 4dzt_A Aqualysin-1, aqualysin- 100.0 1.8E-36 6.3E-41 305.2 17.2 192 17-387 62-259 (276)
32 2p4e_P Proprotein convertase s 100.0 1.6E-38 5.5E-43 350.0 0.0 195 17-386 218-422 (692)
33 3f7m_A Alkaline serine proteas 100.0 5E-36 1.7E-40 302.5 14.4 189 18-387 63-261 (279)
34 3hjr_A Extracellular serine pr 100.0 2.8E-34 9.6E-39 319.8 23.2 117 6-131 95-220 (600)
35 1ga6_A Serine-carboxyl protein 99.8 4.5E-21 1.5E-25 199.7 10.1 99 53-151 91-206 (372)
36 1t1e_A Kumamolisin; proenzyme, 99.8 1.5E-20 5.1E-25 205.3 8.4 97 51-151 274-383 (552)
37 3edy_A Tripeptidyl-peptidase 1 98.7 3.1E-08 1.1E-12 107.5 9.0 98 53-151 263-374 (544)
38 3icu_A E3 ubiquitin-protein li 98.1 2.4E-05 8.1E-10 73.0 11.6 91 207-299 82-186 (194)
39 2ek8_A Aminopeptidase; metallo 93.9 0.13 4.4E-06 53.9 8.4 66 220-287 111-182 (421)
40 2ys4_A Hydrocephalus-inducing 93.7 0.28 9.7E-06 41.7 8.8 74 476-557 40-114 (122)
41 3iib_A Peptidase M28; YP_92679 92.4 0.47 1.6E-05 50.0 10.0 76 220-297 125-224 (444)
42 3kas_A Transferrin receptor pr 88.8 0.74 2.5E-05 50.7 7.7 65 221-287 129-230 (640)
43 3fed_A Glutamate carboxypeptid 87.5 1.2 4E-05 49.6 8.3 37 220-258 151-187 (707)
44 3qbt_B Inositol polyphosphate 79.4 24 0.00081 30.4 11.7 83 478-561 44-137 (140)
45 2e6j_A Hydin protein; PAPD, st 77.8 4.8 0.00016 33.0 6.5 67 477-547 26-93 (112)
46 1y9z_A Alkaline serine proteas 75.2 0.92 3.2E-05 47.6 1.5 32 305-339 180-211 (441)
47 2qsv_A Uncharacterized protein 72.4 23 0.00078 33.0 10.4 66 478-547 20-85 (220)
48 2r39_A FIXG-related protein; s 71.2 19 0.00066 29.9 8.7 52 480-533 34-85 (118)
49 3qis_A Inositol polyphosphate 59.3 33 0.0011 34.7 9.3 55 478-533 47-105 (366)
50 3isy_A Bsupi, intracellular pr 58.6 52 0.0018 27.6 8.8 70 475-546 16-103 (120)
51 3idu_A Uncharacterized protein 53.2 64 0.0022 27.3 8.6 52 476-531 32-84 (127)
52 3zyz_A Beta-D-glucoside glucoh 51.8 56 0.0019 36.2 10.2 53 478-532 614-674 (713)
53 1wgl_A TOLL-interacting protei 48.3 15 0.00051 26.7 3.3 38 350-387 3-40 (59)
54 2x41_A Beta-glucosidase; hydro 47.5 52 0.0018 36.5 9.1 71 460-532 593-677 (721)
55 1w8o_A Bacterial sialidase; 3D 47.3 1.2E+02 0.0039 32.5 11.8 65 466-534 363-428 (601)
56 3abz_A Beta-glucosidase I; gly 44.7 81 0.0028 35.7 10.2 69 460-530 713-795 (845)
57 2kq1_A BH0266 protein; solutio 42.7 6.4 0.00022 33.0 0.6 48 484-531 60-109 (119)
58 2l04_A Major tail protein V; b 40.9 30 0.001 27.4 4.3 37 506-548 8-44 (91)
59 2qsv_A Uncharacterized protein 39.1 83 0.0028 29.0 7.9 54 477-533 134-187 (220)
60 1msp_A MSP, major sperm protei 35.7 1.4E+02 0.0046 25.0 7.9 52 478-532 26-77 (126)
61 3lyw_A YBBR family protein; st 33.4 18 0.0006 28.8 1.7 35 483-517 47-82 (90)
62 1z9l_A Vesicle-associated memb 30.3 1.7E+02 0.006 24.2 7.8 53 477-532 27-79 (128)
63 1wic_A Hypothetical protein ri 29.4 1.7E+02 0.0057 25.4 7.7 51 479-532 37-87 (152)
64 1otr_A Protein CUE2; protein-p 25.8 61 0.0021 22.5 3.2 26 359-384 7-32 (49)
65 2bp3_A Filamin A; structural p 24.1 2.5E+02 0.0087 21.8 7.3 67 484-562 28-94 (97)
66 2cri_A Vesicle-associated memb 24.1 2E+02 0.007 24.5 7.2 52 478-532 32-83 (147)
67 3sd2_A Putative member of DUF3 23.9 2.9E+02 0.0098 22.3 8.7 65 469-545 35-99 (101)
68 2dhy_A CUE domain-containing p 23.7 64 0.0022 24.0 3.2 28 359-386 21-48 (67)
69 3q48_A Chaperone CUPB2; IG fol 23.4 4.7E+02 0.016 24.6 10.6 51 479-532 44-104 (257)
70 1row_A SSP-19, MSP-domain prot 22.2 3.1E+02 0.011 22.1 7.8 49 481-532 19-67 (109)
71 1m1s_A WR4; structural genomic 21.6 3.4E+02 0.012 22.3 9.1 50 480-532 26-75 (116)
72 1ni7_A ER75, hypothetical prot 21.3 70 0.0024 28.1 3.6 25 353-377 85-109 (155)
73 3rfr_A PMOB; membrane, oxidore 20.7 1.2E+02 0.004 30.8 5.3 49 477-531 298-368 (419)
74 2cql_A OK/SW-CL.103, 60S ribos 20.1 1.1E+02 0.0039 24.5 4.3 23 498-520 16-38 (100)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=1.3e-113 Score=956.09 Aligned_cols=521 Identities=37% Similarity=0.559 Sum_probs=473.9
Q ss_pred CCCCCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCCCCHHHHHHHHHHHHHcCCcEEEEc
Q 041372 15 SFRSARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNLCYDADILSALDDAINDVVDILSLS 94 (564)
Q Consensus 15 ~~~sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~~~~~di~~Ai~~Ai~dgvdVIn~S 94 (564)
++.+|+|.+||||||||||||+.+++.+++|++.|+++||||+|+|++||+|+..+|..+++++||++|+++|+||||||
T Consensus 93 ~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~Ai~~A~~~gvdVIn~S 172 (649)
T 3i6s_A 93 TMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIAAMDQAVADGVDMISIS 172 (649)
T ss_dssp TTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEeC
Confidence 56789999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred cCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCC-CCCCccccCCceEEeeeeccCCceeeEEEecCCeEEeceecC
Q 041372 95 FGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSI-FPGTATNVAPGILTVAASSVDRKSYSNIYLGNSKILKGSSLN 173 (564)
Q Consensus 95 lG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g-~~~~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~g~~~~ 173 (564)
||+.. ..+..+.++.++++|+++||+||+||||+| ...++.+.+||+|+|||++.||.|...+.+|+++++.|.+++
T Consensus 173 lG~~~--~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~lgng~~~~g~sl~ 250 (649)
T 3i6s_A 173 YGYRF--IPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTLGNGLKIRGWSLF 250 (649)
T ss_dssp CCCCS--CCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEETTSCEEEEECCC
T ss_pred CccCC--cccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEeCCCcEEeeeecc
Confidence 99863 247789999999999999999999999998 457788899999999999999999999999999999999998
Q ss_pred CCCC-CceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCc--CceEEEEEecCCCchhHHHHHHHHhcCc
Q 041372 174 PLET-KTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLI--KGKIVVCTIEASTDNRREKCIFVRESGG 250 (564)
Q Consensus 174 ~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~--~gkIv~~~~~~~~~~~~~~~~~~~~~Ga 250 (564)
+... ...+++++.. ..+.|.+..+++ .++ +||||+|.+ +.+.+.+|..+++.+|+
T Consensus 251 ~~~~~~~~~plv~~~-------------------~~~~C~~~~l~~-~~vdl~GkIvlc~~--g~~~~~~k~~~~~~~Ga 308 (649)
T 3i6s_A 251 PARAFVRDSPVIYNK-------------------TLSDCSSEELLS-QVENPENTIVICDD--NGDFSDQMRIITRARLK 308 (649)
T ss_dssp SSCBCEEEEEEECCT-------------------TTTTCCCHHHHT-TSSSGGGCEEEECC--CSCHHHHHHHHHHHTCS
T ss_pred cCcccCcceeeEecc-------------------cccccccccccc-cccccCCcEEEEeC--CCccHHHHHHHHHhcCc
Confidence 7643 4568888743 256799988887 777 999999986 57899999999999999
Q ss_pred eEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCC-----CCCc
Q 041372 251 VGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNI-----ITAD 325 (564)
Q Consensus 251 ~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~-----~kPd 325 (564)
.|+|++++........+.+|+++++..+++.|++|++++.+++++|.+..++.+..+.+.++.||||||+. +|||
T Consensus 309 ~g~i~~n~~~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPD 388 (649)
T 3i6s_A 309 AAIFISEDPGVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPD 388 (649)
T ss_dssp EEEEECCCGGGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCC
T ss_pred eEEEEecCccccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCe
Confidence 99999998744445567899999999999999999999999999999999998888999999999999963 8999
Q ss_pred EEcCCCcccccccC-------------CcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCccc
Q 041372 326 IIRSPVAIEATAEQ-------------SVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLNNNQQQ 392 (564)
Q Consensus 326 I~aPg~~i~s~~~~-------------~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~~~~~~ 392 (564)
|+|||++|+++++. ...|.+|||||||||||||++|||||+||+|+|++||++||+||.++++.+.+
T Consensus 389 I~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~ 468 (649)
T 3i6s_A 389 ILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKP 468 (649)
T ss_dssp EEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSB
T ss_pred EEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCc
Confidence 99999999998764 15899999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCccccccCCCCeeeecCchhhhhhcccCCCCccccccccccccc--cCCCCCCCCCCCccee
Q 041372 393 IRRDPNGSQTTPFDNGSGHINQVAAMNPGLIYDFDSHDIINFLCSTGATPRQLENLTGEIIH--CQNPLPPSYNFNYPSI 470 (564)
Q Consensus 393 i~~~~~~~~~~~~~~GaG~Vn~~~A~~pglv~d~~~~dy~~~lc~~g~~~~~~~~~~~~~~~--c~~~~~~~~~lN~psi 470 (564)
+.++..+.++++|+||+|+|||.+|++||||||++++||++|||++||+.++|+.|++.... |+. ...|||||||
T Consensus 469 i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~---~~~~lNyPs~ 545 (649)
T 3i6s_A 469 IKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN---PSADLNYPSF 545 (649)
T ss_dssp CEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC---CCCCCCCSSE
T ss_pred ccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC---chhhcCCCcE
Confidence 98776778899999999999999999999999999999999999999999999999988777 975 4679999999
Q ss_pred Eeec-CCCc-----EEEEEEEEEccCCCeEEEEEEeCCCCcEEEEEeCEEEEeeCCcEEEEEEEEEecccCCCceEEEEE
Q 041372 471 GVSN-MNGS-----LSIHRTVTYYGEGPTVYVGHVNNPTGVNVSVSSAELKFTKTGEKMSFRVDFMPFKKIGGSFVFGDL 544 (564)
Q Consensus 471 ~~~~-~~~~-----~~~~rtvtnvg~~~~ty~~~v~~p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~G~l 544 (564)
++.+ +.++ ++|+|||||||+..++|++++++|.|++|+|+|++|+|++.+||++|+|||+......+.|.||+|
T Consensus 546 ~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~fg~l 625 (649)
T 3i6s_A 546 IALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNVGSI 625 (649)
T ss_dssp EEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCCEEEE
T ss_pred EeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCCceEEEEE
Confidence 9997 6666 899999999999899999999999999999999999999899999999999987555667899999
Q ss_pred EEEC--CceEEEceEEEEEe
Q 041372 545 TWSN--GIHRVRSPIGLNVL 562 (564)
Q Consensus 545 ~w~~--~~h~vr~Pi~v~~~ 562 (564)
+|+| ++|.|||||+|+++
T Consensus 626 ~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 626 TWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp EEEETTSCCEEEEEEEEEEC
T ss_pred EEEcCCCCeEEEEeEEEEEc
Confidence 9999 99999999999875
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=2.7e-104 Score=882.90 Aligned_cols=518 Identities=39% Similarity=0.669 Sum_probs=429.8
Q ss_pred CCCCCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCCCCHHHHHHHHHHHHHcCCcEEEEc
Q 041372 15 SFRSARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNLCYDADILSALDDAINDVVDILSLS 94 (564)
Q Consensus 15 ~~~sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~~~~~di~~Ai~~Ai~dgvdVIn~S 94 (564)
++.+|+|++||||||||||||+.+.+.+++|++.|.++||||+|+|++||+|++.+|..+|+++||++|+++|+||||||
T Consensus 84 ~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di~~a~~~a~~~g~dVin~S 163 (621)
T 3vta_A 84 DVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADGVDIISLS 163 (621)
T ss_dssp CCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHHHHHHHHHHHhCCCEEEec
Confidence 45689999999999999999999988889999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCC-CCCCccccCCceEEeeeeccCCceeeEEEecCCeEEeceecC
Q 041372 95 FGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSI-FPGTATNVAPGILTVAASSVDRKSYSNIYLGNSKILKGSSLN 173 (564)
Q Consensus 95 lG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g-~~~~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~g~~~~ 173 (564)
||+..+. .+..+++++++++|+++||+||+||||+| ...++.+.+||+++|++++.+|.|...+.++++..+.+.++.
T Consensus 164 lG~~~~~-~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~~~~~~~~~~~s~~ 242 (621)
T 3vta_A 164 VGGANPR-HYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVSIN 242 (621)
T ss_dssp CCCCCGG-GGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEEETTSCEEEEBCCC
T ss_pred CCCCCCC-CcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEEeccCceeeeeecc
Confidence 9987543 36778999999999999999999999998 567888999999999999999999999999999999998876
Q ss_pred CCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHhcCceEE
Q 041372 174 PLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRESGGVGM 253 (564)
Q Consensus 174 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~~Ga~g~ 253 (564)
... ...++++.+.+.... .........|.+..+++ ..++|||++|.+. ...+......+|+.++
T Consensus 243 ~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-~~v~gkivl~~~~-----~~~~~~~~~~~Ga~gv 306 (621)
T 3vta_A 243 TFD-NQYYPLVSGRDIPNT---------GFDKSTSRFCTDKSVNP-NLLKGKIVVCEAS-----FGPHEFFKSLDGAAGV 306 (621)
T ss_dssp CSC-CEEECEEETTTSCCT---------TCCHHHHTTTCTTCSCG-GGTTTSEEECSSC-----CCHHHHHHHHTTCSEE
T ss_pred cCC-Ccccccccccccccc---------ccccccccccccccccc-ccccceEEEEecC-----CChhHHhhhhcceeEE
Confidence 543 345666655432111 11223356799988888 8999999999753 3356667778899999
Q ss_pred EEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCC-----CCCcEEc
Q 041372 254 ILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNI-----ITADIIR 328 (564)
Q Consensus 254 i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~-----~kPdI~a 328 (564)
|+.++... ....+.+|...++..++..++.|+.....+.+.+....+.. ..+.+.++.||||||+. +||||+|
T Consensus 307 i~~~~~~~-~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~~-~~~~~~va~FSSrGP~~~~~~ilKPDI~A 384 (621)
T 3vta_A 307 LMTSNTRD-YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTIL-NASAPVVVSFSSRGPNRATKDVIKPDISG 384 (621)
T ss_dssp EEECSCCS-SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEEE-CTTCCCBCTTSCCCSCTTCTTSCSCCEEE
T ss_pred EEEecCCC-cccccccceEEECHHHHHHHHHHHhccCCcceEEecceEec-cCCCCceeeecCCCCCCCCCCeecccccc
Confidence 99876543 34567899999999999999999999999988887666554 46689999999999974 8999999
Q ss_pred CCCccccccc---------CCcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCcccccCCCCC
Q 041372 329 SPVAIEATAE---------QSVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLNNNQQQIRRDPNG 399 (564)
Q Consensus 329 Pg~~i~s~~~---------~~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~~~~~~i~~~~~~ 399 (564)
||++|+++++ ....|.+|||||||||||||++|||||+||+|+|++||++||+||+++++. +
T Consensus 385 PG~~Ilsa~~~~~~~~~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~---------~ 455 (621)
T 3vta_A 385 PGVEILAAWPSVAPVGGIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNAR---------F 455 (621)
T ss_dssp ECSSEEEECCSSSCBTTBCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTT---------T
T ss_pred CCcceEeecCccccccCcCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCccccc---------C
Confidence 9999999875 245799999999999999999999999999999999999999999988754 3
Q ss_pred CCCCCCCCCCCCccccccCCCCeeeecCchhhhhhcccCCCCccccccccccccccCCC-CCCCCCCCcceeEee---cC
Q 041372 400 SQTTPFDNGSGHINQVAAMNPGLIYDFDSHDIINFLCSTGATPRQLENLTGEIIHCQNP-LPPSYNFNYPSIGVS---NM 475 (564)
Q Consensus 400 ~~~~~~~~GaG~Vn~~~A~~pglv~d~~~~dy~~~lc~~g~~~~~~~~~~~~~~~c~~~-~~~~~~lN~psi~~~---~~ 475 (564)
.++.+|+||+|+|||.+|++||||||++.+||+.|||++||+..+++.+++....|... .....|||||||++. ++
T Consensus 456 ~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lN~pS~~v~~~~~~ 535 (621)
T 3vta_A 456 NPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQ 535 (621)
T ss_dssp CTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC-----------------------------CGGGSCCSSEEEECCSSC
T ss_pred CCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCCCcCcccccccccEEEEccCCC
Confidence 45688999999999999999999999999999999999999999999999887788653 345689999999995 45
Q ss_pred CCcEEEEEEEEEccCCCeEEEEEEeCCCCcEEEEEeCEEEEeeCCcEEEEEEEEEecccCCCceEEEEEEEECCceEEEc
Q 041372 476 NGSLSIHRTVTYYGEGPTVYVGHVNNPTGVNVSVSSAELKFTKTGEKMSFRVDFMPFKKIGGSFVFGDLTWSNGIHRVRS 555 (564)
Q Consensus 476 ~~~~~~~rtvtnvg~~~~ty~~~v~~p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~G~l~w~~~~h~vr~ 555 (564)
..+++|+|||||||+..++|++++++|.|++|+|+|++|+|++.||+++|+|||+.. .++.|.||+|+|+|++|.|||
T Consensus 536 ~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~--~~~~~~~g~l~w~d~~h~Vr~ 613 (621)
T 3vta_A 536 TFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGS--IKGFVVSASLVWSDGVHYVRS 613 (621)
T ss_dssp CEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEEC--CCSSEEEEEEEEECSSCCCEE
T ss_pred ceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEec--CCCceEEEEEEEEcCCEEEEe
Confidence 567899999999999999999999999999999999999999999999999999864 467899999999999999999
Q ss_pred eEEEEEe
Q 041372 556 PIGLNVL 562 (564)
Q Consensus 556 Pi~v~~~ 562 (564)
||+|+.+
T Consensus 614 Pi~v~~~ 620 (621)
T 3vta_A 614 PITITSL 620 (621)
T ss_dssp EEEEECC
T ss_pred CEEEEEe
Confidence 9999854
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=3.4e-74 Score=665.54 Aligned_cols=464 Identities=21% Similarity=0.281 Sum_probs=367.9
Q ss_pred CCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC--CCHHHHHHHHHHHHHcCCcEEEEccCCC
Q 041372 21 DSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL--CYDADILSALDDAINDVVDILSLSFGPS 98 (564)
Q Consensus 21 D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~--~~~~di~~Ai~~Ai~dgvdVIn~SlG~~ 98 (564)
|+.||||||||||||+...+.+. .+.++||||+|+|++||+|+..+ |..+++++||++|+++|+||||||||+.
T Consensus 84 D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai~~Ai~~gvdVIn~SlG~~ 159 (926)
T 1xf1_A 84 VDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIRDAINLGAKVINMSFGNA 159 (926)
T ss_dssp CSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCEEEEECCSSC
T ss_pred CCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHHHHHHHhCCcEEEECCCCC
Confidence 89999999999999997654322 24568999999999999998765 4567899999999999999999999986
Q ss_pred CCCCCCccchhhHHHHHHHhCCcEEEEccCCCCCC--------------CCc--cccCCceEEeeeeccCCceeeEEEe-
Q 041372 99 PPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIFP--------------GTA--TNVAPGILTVAASSVDRKSYSNIYL- 161 (564)
Q Consensus 99 ~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~~--------------~~~--~~~ap~vitVga~~~~~~~~~~~~l- 161 (564)
........+.++.++++|+++||+||+||||+|.. .++ +..+||+|+|||++.+|.+...+.+
T Consensus 160 ~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitVgA~~~~~~~~~~~~~~ 239 (926)
T 1xf1_A 160 ALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASYSPDKQLTETVRVK 239 (926)
T ss_dssp CCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEEEEEBCSEEEEEEEEEE
T ss_pred CCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEEeccccccccccceEEE
Confidence 54333456788889999999999999999999831 122 3348999999999999999988887
Q ss_pred cCCeEEeceec---CCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchh
Q 041372 162 GNSKILKGSSL---NPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNR 238 (564)
Q Consensus 162 g~~~~~~g~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~ 238 (564)
+++....+.++ .++.....|++++.. ..|.+..+ .+++||||+|.| +.|.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~lv~~~---------------------~g~~~~~~---~~v~Gkivl~~r--g~~~~ 293 (926)
T 1xf1_A 240 TADQQDKEMPVLSTNRFEPNKAYDYAYAN---------------------RGTKEDDF---KDVKGKIALIER--GDIDF 293 (926)
T ss_dssp CTTSCEEEEEEEEESCCCTTCCEEEEECT---------------------TSCSTTTT---TTCTTSEEEEEC--CSSCH
T ss_pred cCCCcceeeEEEecCCCCCCceEEEEECC---------------------CCCCccch---hhcCCeEEEEEC--CCCCH
Confidence 55544444333 222234567777642 23665554 479999999986 57899
Q ss_pred HHHHHHHHhcCceEEEEEcCCCCC----CCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCccccc
Q 041372 239 REKCIFVRESGGVGMILIDPNAKD----IGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAF 314 (564)
Q Consensus 239 ~~~~~~~~~~Ga~g~i~~~~~~~~----~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~F 314 (564)
.+|..+++.+|++|+|++++.... ......+|...++..+++.|.. ....+.++..........+.+.++.|
T Consensus 294 ~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~~~~~~~~~~~~~~~~a~F 369 (926)
T 1xf1_A 294 KDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITFNATPKVLPTASGTKLSRF 369 (926)
T ss_dssp HHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEECSSCEEEECSSCSBCCTT
T ss_pred HHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEecccceecccCCcceeccc
Confidence 999999999999999999876432 2345679999999999987763 34444444444434556678899999
Q ss_pred ccCCCCC---CCCcEEcCCCcccccccCCcceEEEeccccchhhHHHHHHHHH----hhCCCCCHHH----HHHHHHhcc
Q 041372 315 SSMGPNI---ITADIIRSPVAIEATAEQSVDYNIISGTSMSCPHVSAVAAIIK----SHHPSWSPAA----IMSAIMTTA 383 (564)
Q Consensus 315 SS~GP~~---~kPdI~aPg~~i~s~~~~~~~y~~~SGTSMAaP~VAG~aALl~----q~~P~~sp~~----IksaL~~TA 383 (564)
|||||+. +||||+|||++|+++++. ..|..|||||||||||||++|||+ +.||+|+|+| ||++||+||
T Consensus 370 SSrGp~~~~~lKPDI~APG~~I~sa~~~-~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~Iks~L~~TA 448 (926)
T 1xf1_A 370 SSWGLTADGNIKPDIAAPGQDILSSVAN-NKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSSA 448 (926)
T ss_dssp SCCCBCTTSCBSCCEEEECCCEEESSSC-SSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHHHHHHHHHS
T ss_pred cCCCCCCCCccCceEECCCCCEEeeccC-CcceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHhcC
Confidence 9999974 999999999999999875 489999999999999999999995 5699999997 999999999
Q ss_pred ccccCCcccccCCCCCCCCCCCCCCCCCccccccCCCCeeeecCchhhhhhcccCCCCccccccccccccccCCCCCCCC
Q 041372 384 TVLNNNQQQIRRDPNGSQTTPFDNGSGHINQVAAMNPGLIYDFDSHDIINFLCSTGATPRQLENLTGEIIHCQNPLPPSY 463 (564)
Q Consensus 384 ~~~~~~~~~i~~~~~~~~~~~~~~GaG~Vn~~~A~~pglv~d~~~~dy~~~lc~~g~~~~~~~~~~~~~~~c~~~~~~~~ 463 (564)
.++++.+ ....+++++||+|+||+.+|++|++ |||..++...
T Consensus 449 ~~~~~~~-------~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~-------------------- 490 (926)
T 1xf1_A 449 TALYDED-------EKAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSS-------------------- 490 (926)
T ss_dssp BCCEEGG-------GTEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCS--------------------
T ss_pred CCcccCC-------CCccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcc--------------------
Confidence 9876432 1234678999999999999999964 7887665432
Q ss_pred CCCcceeEeecCCCcEEEEEEEEEccCC--CeEEEEEEeC--CCCcEEEEEeCEEEEeeC-------CcEEEEEEEEEec
Q 041372 464 NFNYPSIGVSNMNGSLSIHRTVTYYGEG--PTVYVGHVNN--PTGVNVSVSSAELKFTKT-------GEKMSFRVDFMPF 532 (564)
Q Consensus 464 ~lN~psi~~~~~~~~~~~~rtvtnvg~~--~~ty~~~v~~--p~g~~v~v~p~~l~~~~~-------g~~~~~~vt~~~~ 532 (564)
+|.+.++..+.+++|||||+|+. ..+|++++.. |.+..++|+|..|.|... ||+++|+|||+..
T Consensus 491 -----~i~l~~~~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~~~~~vt~~~~ 565 (926)
T 1xf1_A 491 -----KVHLNNVSDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSSKQVTVPIDAS 565 (926)
T ss_dssp -----CEEEEEECSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEEEEEEEEEECH
T ss_pred -----eeeccccCccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCCCEEEEEEEEEcC
Confidence 23344455678999999999985 4578888875 779999999998887666 9999999999875
Q ss_pred c--------cCCCceEEEEEEEE--CCceE-EEceEEEEEe
Q 041372 533 K--------KIGGSFVFGDLTWS--NGIHR-VRSPIGLNVL 562 (564)
Q Consensus 533 ~--------~~~~~~~~G~l~w~--~~~h~-vr~Pi~v~~~ 562 (564)
. .+++.|+||+|+|+ +++|. ||+||++..-
T Consensus 566 ~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~g 606 (926)
T 1xf1_A 566 RFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFRG 606 (926)
T ss_dssp HHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEES
T ss_pred ccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEec
Confidence 1 24667899999999 56675 9999999753
No 4
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=1.6e-49 Score=426.20 Aligned_cols=336 Identities=21% Similarity=0.285 Sum_probs=242.7
Q ss_pred CCCCCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCC--eEEEEEEecCCC-CCHHHHHHHHHHHHHc-CCcE
Q 041372 15 SFRSARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSA--RLAIYKACWFNL-CYDADILSALDDAIND-VVDI 90 (564)
Q Consensus 15 ~~~sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A--~l~~ykv~~~~~-~~~~di~~Ai~~Ai~d-gvdV 90 (564)
++.+|+|..||||||||||+|..+. .| +.||||+| +|+.+|+++..+ +..+++++||+||+++ |+||
T Consensus 55 ~~~~~~d~~gHGT~vAgiia~~~~~----~g-----~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~g~~V 125 (441)
T 1y9z_A 55 NWYQPGNNNAHGTHVAGTIAAIANN----EG-----VVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANV 125 (441)
T ss_dssp CTTCCCSSCCHHHHHHHHHHCCCSS----SB-----CCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTTCCSE
T ss_pred CCCCCCCCCCcHHHHHHHHhcccCC----CC-----ceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHhcCCcE
Confidence 3457889999999999999998632 22 48999995 999999998765 6778899999999999 9999
Q ss_pred EEEccCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCC-CCCccccCCceEEeeeeccCCceeeEEEecC------
Q 041372 91 LSLSFGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIF-PGTATNVAPGILTVAASSVDRKSYSNIYLGN------ 163 (564)
Q Consensus 91 In~SlG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~-~~~~~~~ap~vitVga~~~~~~~~~~~~lg~------ 163 (564)
||||||.... ...+..++.+|.++|++||+||||+|. ....++..|++|+|||++.++....+...|.
T Consensus 126 in~S~G~~~~-----~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~vdv~A 200 (441)
T 1y9z_A 126 VTMSLGGSGS-----TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISG 200 (441)
T ss_dssp EEECCCBSCC-----BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTTEEEEE
T ss_pred EEeCCCCCCC-----CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCceEEEe
Confidence 9999997542 245667888899999999999999983 3456778899999999988765332222222
Q ss_pred -------------Ce----EEeceecCCCCC---CceeE--EEEcchhhHHhhhhhcCcccccccccCCCCCC--CCCcC
Q 041372 164 -------------SK----ILKGSSLNPLET---KTFYG--LIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNN--TLDHH 219 (564)
Q Consensus 164 -------------~~----~~~g~~~~~~~~---~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~--~~~~~ 219 (564)
+. ++.|.+++.... ...++ +.+..+. ..+ ........|... .++.
T Consensus 201 pG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~-------~~g---~~~~~~~~C~~~~~~~~~- 269 (441)
T 1y9z_A 201 PGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAP-------INA---SATGALAECTVNGTSFSC- 269 (441)
T ss_dssp ECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECC-------CCC---EEEEEEEEEEEETTEEEC-
T ss_pred ccCCeeccccCCCcccceeecccccccccccCcccccccCCccccccc-------ccc---ccccchhccccccccccC-
Confidence 11 122222221100 00000 0000000 000 000112347653 4455
Q ss_pred CCcCceEEEEEecCC---CchhHHHHHHHHhcCceEEEEEcCCCCC---------CCcceecceEEECHHhHHHHHHHHh
Q 041372 220 TLIKGKIVVCTIEAS---TDNRREKCIFVRESGGVGMILIDPNAKD---------IGFQFVIPATLIGQEEAQELQAYMT 287 (564)
Q Consensus 220 ~~~~gkIv~~~~~~~---~~~~~~~~~~~~~~Ga~g~i~~~~~~~~---------~~~~~~~p~~~i~~~~g~~l~~~~~ 287 (564)
.+++|||++|.|+.. .+.+.+|..+++++|+.++|++++.... ......+|.+.++..+|+.|+.|+.
T Consensus 270 ~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~ 349 (441)
T 1y9z_A 270 GNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLG 349 (441)
T ss_dssp CCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTT
T ss_pred CCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhc
Confidence 789999999997532 2467789999999999999999875431 1224578999999999999998874
Q ss_pred cCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcEEcCCCcccccccCCcceEEEeccccchhhHHHHHHHHHhhC
Q 041372 288 AGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADIIRSPVAIEATAEQSVDYNIISGTSMSCPHVSAVAAIIKSHH 367 (564)
Q Consensus 288 ~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI~aPg~~i~s~~~~~~~y~~~SGTSMAaP~VAG~aALl~q~~ 367 (564)
+. .++. +. .+..|..+||||||||||||++|||||+|
T Consensus 350 ~~----~t~~--------------------------------------~~-~~~~y~~~sGTSmAaP~VAG~aALl~~~~ 386 (441)
T 1y9z_A 350 QS----TTVS--------------------------------------NQ-GNQDYEYYNGTSMATPHVSGVATLVWSYH 386 (441)
T ss_dssp SE----EEEE--------------------------------------EE-EEESEEEECSHHHHHHHHHHHHHHHHHHC
T ss_pred CC----cccc--------------------------------------cc-cCCCceeecccccCCcccchHHHHHHHHC
Confidence 31 1110 00 13489999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhccccccCCcccccCCCCCCCCCCCCCCCCCccccccCCCCeeeecCchhhhhhcccCCCC
Q 041372 368 PSWSPAAIMSAIMTTATVLNNNQQQIRRDPNGSQTTPFDNGSGHINQVAAMNPGLIYDFDSHDIINFLCSTGAT 441 (564)
Q Consensus 368 P~~sp~~IksaL~~TA~~~~~~~~~i~~~~~~~~~~~~~~GaG~Vn~~~A~~pglv~d~~~~dy~~~lc~~g~~ 441 (564)
|+|+|++||++||+||++++..+ .+.+||+|+||+.+|+ ||+.|||+.+++
T Consensus 387 p~~sp~~ik~~L~~TA~~~~~~g------------~~~~~G~G~vn~~~A~-----------~~~~~lc~~~~~ 437 (441)
T 1y9z_A 387 PECSASQVRAALNATADDLSVAG------------RDNQTGYGMINAVAAK-----------AYLDESCTGPTD 437 (441)
T ss_dssp TTSCHHHHHHHHHHHSBCCSSSS------------CBTTTBTCBCCHHHHH-----------HHHHHCTTCC--
T ss_pred CCCCHHHHHHHHHhhchhhccCC------------CcccccccccCHHHHH-----------HHHHhhhcCCCC
Confidence 99999999999999999876432 2457999999999995 799999998765
No 5
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=3e-44 Score=392.62 Aligned_cols=229 Identities=29% Similarity=0.424 Sum_probs=189.2
Q ss_pred CCCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHHc----CCcEE
Q 041372 17 RSARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSALDDAIND----VVDIL 91 (564)
Q Consensus 17 ~sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai~~Ai~d----gvdVI 91 (564)
.+|.|+.||||||||||+|+... ..|.+.||||+|+|++||+|++.+ +..+++++||+||+++ |+|||
T Consensus 172 ~~~~D~~gHGThVAgiiag~~~~-------~~g~~~GvAp~A~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vi 244 (539)
T 3afg_A 172 TTPYDDNGHGTHVASIAAGTGAA-------SNGKYKGMAPGAKLVGIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVI 244 (539)
T ss_dssp SSCCBSSSHHHHHHHHHHCCCGG-------GTTTTCCSCTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CCCCCCCCCHHHHHHHHhCcCcc-------CCCCEEEECCCCEEEEEEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEE
Confidence 46889999999999999998543 134468999999999999998754 5678999999999975 99999
Q ss_pred EEccCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCCC---CCccccCCceEEeeeeccCCceeeEEEecCCeEEe
Q 041372 92 SLSFGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIFP---GTATNVAPGILTVAASSVDRKSYSNIYLGNSKILK 168 (564)
Q Consensus 92 n~SlG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~~---~~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~ 168 (564)
|||||..... ...+.+..++++|.++|++||+||||+|.. ...+..+|++|+|||++.
T Consensus 245 n~SlG~~~~~--~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~----------------- 305 (539)
T 3afg_A 245 NLSLGSSQSS--DGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDK----------------- 305 (539)
T ss_dssp EECCCCCSCC--CSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECT-----------------
T ss_pred EeCCCCCCCC--ccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeeecC-----------------
Confidence 9999986531 346788889999999999999999999832 234556788888886421
Q ss_pred ceecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHhc
Q 041372 169 GSSLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRES 248 (564)
Q Consensus 169 g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~~ 248 (564)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCC---CCCc
Q 041372 249 GGVGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNI---ITAD 325 (564)
Q Consensus 249 Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~---~kPd 325 (564)
...++.||||||+. +|||
T Consensus 306 -----------------------------------------------------------~~~~a~fSs~Gp~~~~~~kpd 326 (539)
T 3afg_A 306 -----------------------------------------------------------YDVITDFSSRGPTADNRLKPE 326 (539)
T ss_dssp -----------------------------------------------------------TSCBCSSSCCCCCTTCBCCCS
T ss_pred -----------------------------------------------------------CcccccccCCCCCCCCCCccc
Confidence 11357899999964 8999
Q ss_pred EEcCCCcccccccC----C----cceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCcccccCCC
Q 041372 326 IIRSPVAIEATAEQ----S----VDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLNNNQQQIRRDP 397 (564)
Q Consensus 326 I~aPg~~i~s~~~~----~----~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~~~~~~i~~~~ 397 (564)
|.|||.+|+++... + ..|..++|||||||||||++|||+|+||+|+|++||++|++||.+++..+
T Consensus 327 i~APG~~I~s~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~~------- 399 (539)
T 3afg_A 327 VVAPGNWIIAARASGTSMGQPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIVKPDE------- 399 (539)
T ss_dssp EEEECSSEEEECCTTCCCSEECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGGG-------
T ss_pred EecCcCCEEeeccCCCCCCCCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCC-------
Confidence 99999999988742 1 25999999999999999999999999999999999999999999765321
Q ss_pred CCCCCCCCCCCCCCccccccCCCC
Q 041372 398 NGSQTTPFDNGSGHINQVAAMNPG 421 (564)
Q Consensus 398 ~~~~~~~~~~GaG~Vn~~~A~~pg 421 (564)
...+.||+|+||+.+|++..
T Consensus 400 ----~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 400 ----IADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp ----CSBTTTBTCBCCHHHHHTGG
T ss_pred ----CCccCccCCccCHHHHhhhc
Confidence 24568999999999999853
No 6
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=1.1e-42 Score=400.87 Aligned_cols=346 Identities=19% Similarity=0.202 Sum_probs=235.8
Q ss_pred CCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC---CCHHHHHHHHHHHHH-----cCCcEE
Q 041372 20 RDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL---CYDADILSALDDAIN-----DVVDIL 91 (564)
Q Consensus 20 ~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~---~~~~di~~Ai~~Ai~-----dgvdVI 91 (564)
.|++||||||||||||.. ++. .+.||||+|+|+.+|++.... +...+++++|.+|++ .|+|||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~~--------g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SSR--------DVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SSS--------SSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-CCC--------CceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 477899999999999986 321 237999999999999987543 245778888888887 799999
Q ss_pred EEccCCCCCCCCCccchhhHHHHHHH-hCCcEEEEccCCCCCC---CCccc--cCCceEEeeeeccCCceeeEEEecCCe
Q 041372 92 SLSFGPSPPQPIYFEDSTSIGTFHAF-QKGILVSASAGNSIFP---GTATN--VAPGILTVAASSVDRKSYSNIYLGNSK 165 (564)
Q Consensus 92 n~SlG~~~~~~~~~~~~~~~~~~~a~-~~Gv~vV~AAGN~g~~---~~~~~--~ap~vitVga~~~~~~~~~~~~lg~~~ 165 (564)
|||||.....+ ..+.+..++.+|. ++|++||+||||+|.. ...+. .+|++|+|||++........
T Consensus 338 NmS~G~~~~~~--~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~------- 408 (1354)
T 3lxu_X 338 NMSYGEHANWS--NSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAE------- 408 (1354)
T ss_dssp EECCCCCCSCS--SCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC--------
T ss_pred EcCCccCCCCC--ccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCcccc-------
Confidence 99999875322 3456677777776 8999999999999832 12344 38999999997542211000
Q ss_pred EEeceecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHH
Q 041372 166 ILKGSSLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFV 245 (564)
Q Consensus 166 ~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~ 245 (564)
| ...
T Consensus 409 ---------------y---------------------------------s~~---------------------------- 412 (1354)
T 3lxu_X 409 ---------------Y---------------------------------AMR---------------------------- 412 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------c---------------------------------ccc----------------------------
Confidence 0 000
Q ss_pred HhcCceEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCC---C
Q 041372 246 RESGGVGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNI---I 322 (564)
Q Consensus 246 ~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~---~ 322 (564)
....+.++.||||||+. +
T Consensus 413 -----------------------------------------------------------~~~~g~~asFSS~GPt~dg~~ 433 (1354)
T 3lxu_X 413 -----------------------------------------------------------EKLPGNVYTWTSRDPCIDGGQ 433 (1354)
T ss_dssp ----------------------------------------------------------------CCCCCCCCSCCSSSSC
T ss_pred -----------------------------------------------------------cCCCCccccccCCCCCccCCC
Confidence 00123568999999974 8
Q ss_pred CCcEEcCCCccccccc-CCcceEEEeccccchhhHHHHHHHHHh----hCCCCCHHHHHHHHHhccccccCCcccccCCC
Q 041372 323 TADIIRSPVAIEATAE-QSVDYNIISGTSMSCPHVSAVAAIIKS----HHPSWSPAAIMSAIMTTATVLNNNQQQIRRDP 397 (564)
Q Consensus 323 kPdI~aPg~~i~s~~~-~~~~y~~~SGTSMAaP~VAG~aALl~q----~~P~~sp~~IksaL~~TA~~~~~~~~~i~~~~ 397 (564)
||||+|||.+|.++.. ....|..++|||||||||||++|||++ .+|+|++.+||.+|++||.+++.
T Consensus 434 KpDIaAPG~~I~St~~~~~~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~--------- 504 (1354)
T 3lxu_X 434 GVTVCAPGGAIASVPQFTMSKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY--------- 504 (1354)
T ss_dssp CEEEEEEC---------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT---------
T ss_pred cceEEecCceEEEeecCCCCceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC---------
Confidence 9999999999988654 245899999999999999999999976 89999999999999999997652
Q ss_pred CCCCCCCCCCCCCCccccccCCCCeeeecCchhhhhhcccCCCCcc-ccccccccccccCCCCCCCCCCCcceeEeecCC
Q 041372 398 NGSQTTPFDNGSGHINQVAAMNPGLIYDFDSHDIINFLCSTGATPR-QLENLTGEIIHCQNPLPPSYNFNYPSIGVSNMN 476 (564)
Q Consensus 398 ~~~~~~~~~~GaG~Vn~~~A~~pglv~d~~~~dy~~~lc~~g~~~~-~~~~~~~~~~~c~~~~~~~~~lN~psi~~~~~~ 476 (564)
..++.||+|+||+.+|++..+.++..+++|+.|+|..+.... .|. ... . . ..
T Consensus 505 ----~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgIy--lR~----~-------~----------~~ 557 (1354)
T 3lxu_X 505 ----VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGIH--LRQ----G-------V----------QR 557 (1354)
T ss_dssp ----SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSEE--ECS----S-------C----------CC
T ss_pred ----CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCceE--Eec----c-------c----------cC
Confidence 345689999999999999999999999999999999775321 110 000 0 0 01
Q ss_pred CcEEEEEEEEEcc-------CC-CeEE--EEEEe-CCCCcEEEEEeCEEEEeeCCcEEEEEEEEEecccCCCceEEEEEE
Q 041372 477 GSLSIHRTVTYYG-------EG-PTVY--VGHVN-NPTGVNVSVSSAELKFTKTGEKMSFRVDFMPFKKIGGSFVFGDLT 545 (564)
Q Consensus 477 ~~~~~~rtvtnvg-------~~-~~ty--~~~v~-~p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~G~l~ 545 (564)
....++.+|+-+= +. ...+ ++.+. ..+ -|++ |..|.+ .++.++|.|+++++.-.. ..-+++|.
T Consensus 558 ~~~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~~--wv~~-p~~l~l--~~~~r~~~v~vDp~~L~~-G~h~~~v~ 631 (1354)
T 3lxu_X 558 NSIDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQP--WVQC-GAFLDL--SYGTRSIAVRVDPTGLQP-GVHSAVIR 631 (1354)
T ss_dssp SCEEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESST--TEEE-CSCEEC--TTSCEEEEEEECGGGCCS-EEEEEEEE
T ss_pred CceEEEEEEeeeecCcccCChhhccceEEEEEEecCCC--ceec-ccceee--cCCCceEEEEECCCCCCC-cceeEEEE
Confidence 1222333332111 11 1111 11111 112 2333 888887 688899999999875433 45689998
Q ss_pred EEC-----CceEEEceEEEE
Q 041372 546 WSN-----GIHRVRSPIGLN 560 (564)
Q Consensus 546 w~~-----~~h~vr~Pi~v~ 560 (564)
..| .+...|+||.|.
T Consensus 632 ~~D~~~~~~gp~f~ipvTv~ 651 (1354)
T 3lxu_X 632 AYDTDCVQKGSLFEIPVTVV 651 (1354)
T ss_dssp EEESSCTTSCCSEEEEEEEE
T ss_pred EEEcCCcccCceEEeeEEEE
Confidence 765 347899999774
No 7
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=1.8e-43 Score=368.94 Aligned_cols=225 Identities=21% Similarity=0.219 Sum_probs=156.9
Q ss_pred CCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC------CCHHHHHHHHHHHHHcCCcEE
Q 041372 18 SARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL------CYDADILSALDDAINDVVDIL 91 (564)
Q Consensus 18 sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~------~~~~di~~Ai~~Ai~dgvdVI 91 (564)
+|.|.+||||||||||+|+... .+.||||+|+|+.+|++.... +...++++||++|++.|++||
T Consensus 102 ~~~D~~gHGThVAGiiag~~~~----------g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~g~~Vi 171 (357)
T 4h6x_A 102 DRIVLNDHACHVTSTIVGQEHS----------PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELGANII 171 (357)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTS----------SCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHTTCSEE
T ss_pred CCcCCCCcHHHHHHHHhccCCC----------CceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHcCCCEE
Confidence 3557789999999999997532 237999999999999975422 234568999999999999999
Q ss_pred EEccCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCC-CCCccccCCceEEeeeeccCCceeeEEEecCCeEEece
Q 041372 92 SLSFGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIF-PGTATNVAPGILTVAASSVDRKSYSNIYLGNSKILKGS 170 (564)
Q Consensus 92 n~SlG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~-~~~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~g~ 170 (564)
|||||...... ...+.+..++.++.++|++||+||||+|. ....+...|++|+|||++.
T Consensus 172 n~S~G~~~~~~-~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------------- 231 (357)
T 4h6x_A 172 HCAFCRPTQTS-EGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV------------------- 231 (357)
T ss_dssp EEC------------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT-------------------
T ss_pred eeccccCCccc-cchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEecc-------------------
Confidence 99999764322 34567888889999999999999999983 3345566778888887421
Q ss_pred ecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHhcCc
Q 041372 171 SLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRESGG 250 (564)
Q Consensus 171 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~~Ga 250 (564)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcEEcCC
Q 041372 251 VGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADIIRSP 330 (564)
Q Consensus 251 ~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI~aPg 330 (564)
.+.++.||+||+...||||.|||
T Consensus 232 ---------------------------------------------------------~~~~~~fSn~G~~~~~~di~APG 254 (357)
T 4h6x_A 232 ---------------------------------------------------------DGTPCHFSNWGGNNTKEGILAPG 254 (357)
T ss_dssp ---------------------------------------------------------TSSBCTTCC---CTTTTEEEEEC
T ss_pred ---------------------------------------------------------CCcccccccCCCCCCccceeecC
Confidence 12347899999999999999999
Q ss_pred CcccccccCCcceEEEeccccchhhHHHHHHHHHh----hCCCCCHHHHHHHHHhccccccCCcccccCCCCCCCCCCCC
Q 041372 331 VAIEATAEQSVDYNIISGTSMSCPHVSAVAAIIKS----HHPSWSPAAIMSAIMTTATVLNNNQQQIRRDPNGSQTTPFD 406 (564)
Q Consensus 331 ~~i~s~~~~~~~y~~~SGTSMAaP~VAG~aALl~q----~~P~~sp~~IksaL~~TA~~~~~~~~~i~~~~~~~~~~~~~ 406 (564)
..|+++.+.+..|..+||||||||||||++|||++ ++|.|+++|||.+|++||++++.. ....+++
T Consensus 255 ~~i~s~~~~~~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~----------~~~~~~~ 324 (357)
T 4h6x_A 255 EEILGAQPCTEEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE----------VVEEPER 324 (357)
T ss_dssp SSEEECCTTCSCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC------------------------
T ss_pred CCeEeccCCCCcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC----------CCCCccc
Confidence 99999988777888999999999999999999995 567899999999999999977532 1234568
Q ss_pred CCCCCccccccCC
Q 041372 407 NGSGHINQVAAMN 419 (564)
Q Consensus 407 ~GaG~Vn~~~A~~ 419 (564)
||+|+||+.+|++
T Consensus 325 ~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 325 CLRGFVNIPGAMK 337 (357)
T ss_dssp CTTCBCCHHHHHH
T ss_pred ceeEEecHHHHHH
Confidence 9999999999986
No 8
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=4.3e-42 Score=344.60 Aligned_cols=213 Identities=33% Similarity=0.420 Sum_probs=178.8
Q ss_pred CCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHHcCCcEEEEccC
Q 041372 18 SARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSALDDAINDVVDILSLSFG 96 (564)
Q Consensus 18 sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai~~Ai~dgvdVIn~SlG 96 (564)
.+.|..||||||||||+|..+ + .| +.||||+|+|+.+|++...+ +..+++++||+||+++|++|||||||
T Consensus 55 ~~~d~~gHGT~vAgiia~~~~-~---~~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~Vin~S~G 125 (269)
T 1gci_A 55 STQDGNGHGTHVAGTIAALNN-S---IG-----VLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVANLSLG 125 (269)
T ss_dssp SCSCSSSHHHHHHHHHHCCCS-S---SB-----CCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CCCCCCCChHHHHHHHhcCcC-C---CC-----cEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCCeEEEeCCC
Confidence 467899999999999999732 1 12 37999999999999987653 56788999999999999999999999
Q ss_pred CCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCC-CCCccccCCceEEeeeeccCCceeeEEEecCCeEEeceecCCC
Q 041372 97 PSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIF-PGTATNVAPGILTVAASSVDRKSYSNIYLGNSKILKGSSLNPL 175 (564)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~-~~~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~g~~~~~~ 175 (564)
.... ...+..++.++.++|++||+||||+|. ....+...|++|+||+.+.
T Consensus 126 ~~~~-----~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~------------------------ 176 (269)
T 1gci_A 126 SPSP-----SATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ------------------------ 176 (269)
T ss_dssp BSSC-----CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT------------------------
T ss_pred CCCC-----CHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC------------------------
Confidence 7542 356777888999999999999999983 2445566778888886421
Q ss_pred CCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHhcCceEEEE
Q 041372 176 ETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRESGGVGMIL 255 (564)
Q Consensus 176 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~~Ga~g~i~ 255 (564)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcEEcCCCcccc
Q 041372 256 IDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADIIRSPVAIEA 335 (564)
Q Consensus 256 ~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI~aPg~~i~s 335 (564)
.+.++.||++||. |||.|||..|++
T Consensus 177 ----------------------------------------------------~~~~~~~S~~G~~---~di~APG~~i~s 201 (269)
T 1gci_A 177 ----------------------------------------------------NNNRASFSQYGAG---LDIVAPGVNVQS 201 (269)
T ss_dssp ----------------------------------------------------TSCBCTTCCCSTT---EEEEEECSSEEE
T ss_pred ----------------------------------------------------CCCCCCCCCCCCC---cceEecCCCeEe
Confidence 1234789999985 599999999998
Q ss_pred cccCCcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCcccccCCCCCCCCCCCCCCCCCcccc
Q 041372 336 TAEQSVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLNNNQQQIRRDPNGSQTTPFDNGSGHINQV 415 (564)
Q Consensus 336 ~~~~~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~~~~~~i~~~~~~~~~~~~~~GaG~Vn~~ 415 (564)
+.+. ..|..++|||||||||||++|||+|++|+|++.|||.+|++||.++. .++.||+|+||+.
T Consensus 202 ~~~~-~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g---------------~~~~~G~G~vn~~ 265 (269)
T 1gci_A 202 TYPG-STYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG---------------STNLYGSGLVNAE 265 (269)
T ss_dssp EETT-TEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS---------------CHHHHTTCBCCHH
T ss_pred ecCC-CCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC---------------CCCCcccCccCHH
Confidence 8765 48999999999999999999999999999999999999999998763 2357999999999
Q ss_pred ccCC
Q 041372 416 AAMN 419 (564)
Q Consensus 416 ~A~~ 419 (564)
+|++
T Consensus 266 ~A~~ 269 (269)
T 1gci_A 266 AATR 269 (269)
T ss_dssp HHTC
T ss_pred HHcC
Confidence 9985
No 9
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=9.7e-42 Score=343.16 Aligned_cols=213 Identities=30% Similarity=0.395 Sum_probs=176.7
Q ss_pred CCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHHcCCcEEEEccC
Q 041372 18 SARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSALDDAINDVVDILSLSFG 96 (564)
Q Consensus 18 sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai~~Ai~dgvdVIn~SlG 96 (564)
.+.|..||||||||||+|..+ + .| +.||||+|+|+.+|++...+ +..+++++||+||+++|+||||||||
T Consensus 56 ~~~d~~gHGT~vAgiia~~~~-~---~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G 126 (274)
T 1r0r_E 56 YNTDGNGHGTHVAGTVAALDN-T---TG-----VLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMDVINMSLG 126 (274)
T ss_dssp TTCCSSSHHHHHHHHHHCCSS-S---SB-----CCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEE
T ss_pred CCCCCCCCHHHHHHHHHccCC-C---Cc-----eEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCCCEEEeCCC
Confidence 367899999999999999742 1 12 37999999999999987654 56788999999999999999999999
Q ss_pred CCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCCC-----CCccccCCceEEeeeeccCCceeeEEEecCCeEEecee
Q 041372 97 PSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIFP-----GTATNVAPGILTVAASSVDRKSYSNIYLGNSKILKGSS 171 (564)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~~-----~~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~g~~ 171 (564)
.... ...+..++.++.++|+++|+||||+|.. ...+...|++|+||+.+.
T Consensus 127 ~~~~-----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~-------------------- 181 (274)
T 1r0r_E 127 GASG-----STAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS-------------------- 181 (274)
T ss_dssp BSSC-----CHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT--------------------
T ss_pred CCCC-----cHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC--------------------
Confidence 7542 3567778889999999999999999842 223455566676665421
Q ss_pred cCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHhcCce
Q 041372 172 LNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRESGGV 251 (564)
Q Consensus 172 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~~Ga~ 251 (564)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcEEcCCC
Q 041372 252 GMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADIIRSPV 331 (564)
Q Consensus 252 g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI~aPg~ 331 (564)
.+.++.||++|| +|||.|||.
T Consensus 182 --------------------------------------------------------~~~~~~~S~~G~---~~di~APG~ 202 (274)
T 1r0r_E 182 --------------------------------------------------------NSNRASFSSVGA---ELEVMAPGA 202 (274)
T ss_dssp --------------------------------------------------------TSCBCTTCCCST---TEEEEEECS
T ss_pred --------------------------------------------------------CCCcCccCCCCC---CceEEeCCC
Confidence 123478999998 579999999
Q ss_pred cccccccCCcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCcccccCCCCCCCCCCCCCCCCC
Q 041372 332 AIEATAEQSVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLNNNQQQIRRDPNGSQTTPFDNGSGH 411 (564)
Q Consensus 332 ~i~s~~~~~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~~~~~~i~~~~~~~~~~~~~~GaG~ 411 (564)
.|+++.+. ..|..++|||||||||||++|||+|++|+|++.|||++|++||+++. .++.||+|+
T Consensus 203 ~i~s~~~~-~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g---------------~~~~~G~G~ 266 (274)
T 1r0r_E 203 GVYSTYPT-NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG---------------SSFYYGKGL 266 (274)
T ss_dssp SEEEEETT-TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS---------------CHHHHTTCB
T ss_pred CeEeecCC-CCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC---------------CCCCcccCc
Confidence 99988765 48999999999999999999999999999999999999999998653 245899999
Q ss_pred ccccccCC
Q 041372 412 INQVAAMN 419 (564)
Q Consensus 412 Vn~~~A~~ 419 (564)
||+.+|++
T Consensus 267 ~~~~~A~~ 274 (274)
T 1r0r_E 267 INVEAAAQ 274 (274)
T ss_dssp CCHHHHTC
T ss_pred cCHHHHhC
Confidence 99999985
No 10
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=1.8e-41 Score=342.12 Aligned_cols=214 Identities=28% Similarity=0.312 Sum_probs=173.9
Q ss_pred CCCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHHcCCcEEEEcc
Q 041372 17 RSARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSALDDAINDVVDILSLSF 95 (564)
Q Consensus 17 ~sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai~~Ai~dgvdVIn~Sl 95 (564)
.+|.|..||||||||||+|...++. | +.||||+|+|+.+|++...+ +..+++++||++|+++|+|||||||
T Consensus 64 ~~~~d~~gHGT~vAgiia~~~~~~~---g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~g~~Vin~S~ 135 (280)
T 1dbi_A 64 YDPMDLNNHGTHVAGIAAAETNNAT---G-----IAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGAEVINLSL 135 (280)
T ss_dssp SCCCCSSSHHHHHHHHHHCCCSSSS---S-----CCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCCCcHHHHHHHHhCcCCCCC---c-----ceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCCCEEEeCC
Confidence 3578999999999999999864432 2 37999999999999987654 6678999999999999999999999
Q ss_pred CCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCC-CCCccccCCceEEeeeeccCCceeeEEEecCCeEEeceecCC
Q 041372 96 GPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIF-PGTATNVAPGILTVAASSVDRKSYSNIYLGNSKILKGSSLNP 174 (564)
Q Consensus 96 G~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~-~~~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~g~~~~~ 174 (564)
|... ....+..++.++.++|+++|+||||+|. ....+...|++|+||+++.
T Consensus 136 G~~~-----~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~----------------------- 187 (280)
T 1dbi_A 136 GCDC-----HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ----------------------- 187 (280)
T ss_dssp SSCC-----CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT-----------------------
T ss_pred CCCC-----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC-----------------------
Confidence 9753 2356777888999999999999999983 2344566777888886421
Q ss_pred CCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHhcCceEEE
Q 041372 175 LETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRESGGVGMI 254 (564)
Q Consensus 175 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~~Ga~g~i 254 (564)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcEEcCCCccc
Q 041372 255 LIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADIIRSPVAIE 334 (564)
Q Consensus 255 ~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI~aPg~~i~ 334 (564)
.+.++.||++|| +|||.|||..|+
T Consensus 188 -----------------------------------------------------~~~~~~~S~~G~---~~dv~ApG~~i~ 211 (280)
T 1dbi_A 188 -----------------------------------------------------YDRLASFSNYGT---WVDVVAPGVDIV 211 (280)
T ss_dssp -----------------------------------------------------TSCBCTTBCCST---TCCEEEECSSEE
T ss_pred -----------------------------------------------------CCCcCCCCCCCC---CceEEEecCCeE
Confidence 123478999997 469999999999
Q ss_pred ccccCCcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCcccccCCCCCCCCCCCCCCCCCccc
Q 041372 335 ATAEQSVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLNNNQQQIRRDPNGSQTTPFDNGSGHINQ 414 (564)
Q Consensus 335 s~~~~~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~~~~~~i~~~~~~~~~~~~~~GaG~Vn~ 414 (564)
++... ..|..++|||||||||||++|||++ |.+++.+||++|++||+++... ...||+|+||+
T Consensus 212 s~~~~-~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~~--------------~~~~G~G~vn~ 274 (280)
T 1dbi_A 212 STITG-NRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGT--------------GTYFKYGRINS 274 (280)
T ss_dssp EEETT-TEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTTB--------------TTTBSSEECCH
T ss_pred eecCC-CCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCCC--------------CCcccCCEECH
Confidence 88765 4899999999999999999999987 9999999999999999976521 24689999999
Q ss_pred cccCC
Q 041372 415 VAAMN 419 (564)
Q Consensus 415 ~~A~~ 419 (564)
.+|++
T Consensus 275 ~~A~~ 279 (280)
T 1dbi_A 275 YNAVT 279 (280)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99985
No 11
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=2.6e-41 Score=341.17 Aligned_cols=212 Identities=32% Similarity=0.447 Sum_probs=176.7
Q ss_pred CCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHHcCCcEEEEccCCC
Q 041372 20 RDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSALDDAINDVVDILSLSFGPS 98 (564)
Q Consensus 20 ~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai~~Ai~dgvdVIn~SlG~~ 98 (564)
.|..||||||||||+|..+ + .| +.||||+|+|+.+|++...+ +..+++++||++|+++|++|||||||..
T Consensus 59 ~d~~gHGT~vAgiia~~~~-~---~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~ 129 (281)
T 1to2_E 59 QDNNSHGTHVAGTVAALNN-S---IG-----VLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDVINMSLGGP 129 (281)
T ss_dssp CCSSSHHHHHHHHHHCCSS-S---SS-----BCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBS
T ss_pred CCCCCcHHHHHHHHhccCC-C---Cc-----ceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCCcEEEECCcCC
Confidence 6889999999999999742 1 12 37999999999999987654 5678899999999999999999999975
Q ss_pred CCCCCCccchhhHHHHHHHhCCcEEEEccCCCCCC-----CCccccCCceEEeeeeccCCceeeEEEecCCeEEeceecC
Q 041372 99 PPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIFP-----GTATNVAPGILTVAASSVDRKSYSNIYLGNSKILKGSSLN 173 (564)
Q Consensus 99 ~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~~-----~~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~g~~~~ 173 (564)
.. ...+..++.++.++|++||+||||+|.. ...+...|++|+||+.+.
T Consensus 130 ~~-----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~---------------------- 182 (281)
T 1to2_E 130 SG-----SAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDS---------------------- 182 (281)
T ss_dssp CC-----CHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECT----------------------
T ss_pred CC-----CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecC----------------------
Confidence 42 3567788889999999999999999843 223455666677765421
Q ss_pred CCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHhcCceEE
Q 041372 174 PLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRESGGVGM 253 (564)
Q Consensus 174 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~~Ga~g~ 253 (564)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcEEcCCCcc
Q 041372 254 ILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADIIRSPVAI 333 (564)
Q Consensus 254 i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI~aPg~~i 333 (564)
.+.++.||++|| +|||.|||..|
T Consensus 183 ------------------------------------------------------~~~~~~fS~~G~---~~di~APG~~i 205 (281)
T 1to2_E 183 ------------------------------------------------------SNQRASFSSVGP---ELDVMAPGVSI 205 (281)
T ss_dssp ------------------------------------------------------TSCBCTTCCCST---TCCEEEECSSE
T ss_pred ------------------------------------------------------CCCcCCcCCCCC---CceEEecCCCe
Confidence 123478999999 46999999999
Q ss_pred cccccCCcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCcccccCCCCCCCCCCCCCCCCCcc
Q 041372 334 EATAEQSVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLNNNQQQIRRDPNGSQTTPFDNGSGHIN 413 (564)
Q Consensus 334 ~s~~~~~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~~~~~~i~~~~~~~~~~~~~~GaG~Vn 413 (564)
.++.+. ..|..++|||||||||||++|||+|++|+|++.|||++|++||.++. .++.||+|+||
T Consensus 206 ~s~~~~-~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g---------------~~~~~G~G~v~ 269 (281)
T 1to2_E 206 QSTLPG-NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG---------------DSFYYGKGLIN 269 (281)
T ss_dssp EEEETT-TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS---------------CHHHHTTCBCC
T ss_pred EeecCC-CCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC---------------CCCCcccceec
Confidence 988765 48999999999999999999999999999999999999999998753 24589999999
Q ss_pred ccccCCC
Q 041372 414 QVAAMNP 420 (564)
Q Consensus 414 ~~~A~~p 420 (564)
+.+|+.+
T Consensus 270 ~~~a~~~ 276 (281)
T 1to2_E 270 VQAAAQH 276 (281)
T ss_dssp HHHHTSS
T ss_pred HHHHhhh
Confidence 9999975
No 12
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=2.7e-42 Score=348.94 Aligned_cols=222 Identities=22% Similarity=0.211 Sum_probs=177.8
Q ss_pred CCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCC--CCCHHHHHHHHHHHHHcCCcEEEEccCC
Q 041372 20 RDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFN--LCYDADILSALDDAINDVVDILSLSFGP 97 (564)
Q Consensus 20 ~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~--~~~~~di~~Ai~~Ai~dgvdVIn~SlG~ 97 (564)
.|.+||||||||||+|+... .+.||||+|+|+.+|++.+. .....++++||+||++.|++|||||||.
T Consensus 46 ~~~~gHGT~VAGiiag~~~~----------~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~ 115 (282)
T 3zxy_A 46 GFMSAHGTHVASIIFGQPET----------SVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGE 115 (282)
T ss_dssp CHHHHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCE
T ss_pred CCCCCcccceeehhhccCCc----------eeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCcc
Confidence 34578999999999997532 23799999999999998643 3567789999999999999999999996
Q ss_pred CCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCC-CCCccccCCceEEeeeeccCCceeeEEEecCCeEEeceecCCCC
Q 041372 98 SPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIF-PGTATNVAPGILTVAASSVDRKSYSNIYLGNSKILKGSSLNPLE 176 (564)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~-~~~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~g~~~~~~~ 176 (564)
..... .....+..++..+.++|+++|+||||+|. ....+...|++|+|||.+.
T Consensus 116 ~~~~~-~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~------------------------- 169 (282)
T 3zxy_A 116 LTDFG-EADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDD------------------------- 169 (282)
T ss_dssp EESSS-CCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECT-------------------------
T ss_pred ccccc-cccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcC-------------------------
Confidence 54321 23456777888999999999999999983 3345566788888887431
Q ss_pred CCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHhcCceEEEEE
Q 041372 177 TKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRESGGVGMILI 256 (564)
Q Consensus 177 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~~Ga~g~i~~ 256 (564)
T Consensus 170 -------------------------------------------------------------------------------- 169 (282)
T 3zxy_A 170 -------------------------------------------------------------------------------- 169 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcEEcCCCccccc
Q 041372 257 DPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADIIRSPVAIEAT 336 (564)
Q Consensus 257 ~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI~aPg~~i~s~ 336 (564)
.+.++.||+||+...||||.|||..|+++
T Consensus 170 ---------------------------------------------------~~~~~~~S~~~~~~~~~di~ApG~~i~s~ 198 (282)
T 3zxy_A 170 ---------------------------------------------------HGHPLDFSNWGSTYEQQGILAPGEDILGA 198 (282)
T ss_dssp ---------------------------------------------------TSCBCSSSCCCHHHHHHEEEEECSSEEEE
T ss_pred ---------------------------------------------------CCccccccCCCCCccccceeccCcceeee
Confidence 12346788888887889999999999998
Q ss_pred ccCCcceEEEeccccchhhHHHHHHHHHhhC----CCCCHHHHHHHHHhccccccCCcccccCCCCCCCCCCCCCCCCCc
Q 041372 337 AEQSVDYNIISGTSMSCPHVSAVAAIIKSHH----PSWSPAAIMSAIMTTATVLNNNQQQIRRDPNGSQTTPFDNGSGHI 412 (564)
Q Consensus 337 ~~~~~~y~~~SGTSMAaP~VAG~aALl~q~~----P~~sp~~IksaL~~TA~~~~~~~~~i~~~~~~~~~~~~~~GaG~V 412 (564)
.+. ..|..++|||||||||||++|||+|++ |.++|+|||.+|++||++++.. .+.....+|+|+|
T Consensus 199 ~~~-~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~----------~~~~~~~~G~G~l 267 (282)
T 3zxy_A 199 KPG-GGTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDD----------APEQARRCLAGRL 267 (282)
T ss_dssp CTT-SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC-----------------CGGGTTCBC
T ss_pred cCC-CceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCC----------CCCccCceeeeEe
Confidence 775 489999999999999999999999865 8899999999999999876531 2234457999999
Q ss_pred cccccCC
Q 041372 413 NQVAAMN 419 (564)
Q Consensus 413 n~~~A~~ 419 (564)
|+.+|++
T Consensus 268 n~~~A~~ 274 (282)
T 3zxy_A 268 NVSGAFT 274 (282)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 9999985
No 13
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=2.2e-41 Score=366.50 Aligned_cols=220 Identities=23% Similarity=0.247 Sum_probs=178.8
Q ss_pred CCCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCCCCHHHHHHHHHHHHHcCCcEEEEccC
Q 041372 17 RSARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNLCYDADILSALDDAINDVVDILSLSFG 96 (564)
Q Consensus 17 ~sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~~~~~di~~Ai~~Ai~dgvdVIn~SlG 96 (564)
..+.|..||||||||||+|+.. +.||||+|+|+++|+|+...+..+++++||++|+++|++|||||||
T Consensus 193 ~~~~d~~gHGT~vAgiiaa~g~------------~~GvAp~a~l~~~kv~~~~~~~~~~i~~ai~~a~~~g~~Vin~S~G 260 (471)
T 3t41_A 193 HDVNDRKGHGTMVSGQTSANGK------------LIGVAPNNKFTMYRVFGSKKTELLWVSKAIVQAANDGNQVINISVG 260 (471)
T ss_dssp TCCCCSSSHHHHHHHHHHCBSS------------SBCSSTTSCEEEEECCSSSCCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CCCcCCCCccchhhheeecCCc------------eeEECCCCeEEEEEeccCCCCcHHHHHHHHHHHHhCCCCEEEeCCC
Confidence 4678999999999999998642 4799999999999999887788999999999999999999999999
Q ss_pred CCCCC-----C------CCccchhhHHHHHHHhCCcEEEEccCCCCCCCC-------------------ccccCCceEEe
Q 041372 97 PSPPQ-----P------IYFEDSTSIGTFHAFQKGILVSASAGNSIFPGT-------------------ATNVAPGILTV 146 (564)
Q Consensus 97 ~~~~~-----~------~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~~~~-------------------~~~~ap~vitV 146 (564)
..... . ....+.+..++.++.++|++||+||||+|.... .++.+|++|+|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitV 340 (471)
T 3t41_A 261 SYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTV 340 (471)
T ss_dssp EEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEE
T ss_pred CCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCeEEE
Confidence 63110 0 012356778888999999999999999984211 33445555555
Q ss_pred eeeccCCceeeEEEecCCeEEeceecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceE
Q 041372 147 AASSVDRKSYSNIYLGNSKILKGSSLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKI 226 (564)
Q Consensus 147 ga~~~~~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkI 226 (564)
||++
T Consensus 341 gA~~---------------------------------------------------------------------------- 344 (471)
T 3t41_A 341 GSTD---------------------------------------------------------------------------- 344 (471)
T ss_dssp EEEC----------------------------------------------------------------------------
T ss_pred EeeC----------------------------------------------------------------------------
Confidence 5432
Q ss_pred EEEEecCCCchhHHHHHHHHhcCceEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeeccc
Q 041372 227 VVCTIEASTDNRREKCIFVRESGGVGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTK 306 (564)
Q Consensus 227 v~~~~~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~ 306 (564)
T Consensus 345 -------------------------------------------------------------------------------- 344 (471)
T 3t41_A 345 -------------------------------------------------------------------------------- 344 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcccccccCCCCCCCCcEEcCCCc----------------------ccccccCCcceEEEeccccchhhHHHHHHHHH
Q 041372 307 PAPEMAAFSSMGPNIITADIIRSPVA----------------------IEATAEQSVDYNIISGTSMSCPHVSAVAAIIK 364 (564)
Q Consensus 307 ~~~~va~FSS~GP~~~kPdI~aPg~~----------------------i~s~~~~~~~y~~~SGTSMAaP~VAG~aALl~ 364 (564)
..+.++.||+|||+. |||.|||++ |+++.+. ..|..++|||||||||||++|||+
T Consensus 345 ~~~~~a~fS~~G~~~--~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~-~~~~~~sGTS~AaP~VAG~aAll~ 421 (471)
T 3t41_A 345 QKSNLSEFSNFGMNY--TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANN-GRYIYQAGTALATPKVSGALALII 421 (471)
T ss_dssp TTSSBCTTCCBCTTT--CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTT-SSEEEECSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCccCCCCCC--CeEEecCCCcccccccccccccccccccCceeEecCCC-CCEEeecchHHHHHHHHHHHHHHH
Confidence 123468899999975 799999987 6666654 489999999999999999999999
Q ss_pred hhCC-CCCHHHHHHHHHhccccccCCcccccCCCCCCCCCCCCCCCCCccccccCCC
Q 041372 365 SHHP-SWSPAAIMSAIMTTATVLNNNQQQIRRDPNGSQTTPFDNGSGHINQVAAMNP 420 (564)
Q Consensus 365 q~~P-~~sp~~IksaL~~TA~~~~~~~~~i~~~~~~~~~~~~~~GaG~Vn~~~A~~p 420 (564)
|++| .|+|.+||.+|++||.+... .....||+|+||+.+|++.
T Consensus 422 ~~~p~~~~~~~v~~~L~~tA~~~~~-------------~~~~~~G~G~vd~~~Al~~ 465 (471)
T 3t41_A 422 DKYHLEKHPDKAIELLYQHGTSKNN-------------KPFSRYGHGELDVYKALNV 465 (471)
T ss_dssp HHHTCTTCHHHHHHHHHHHSBCCSC-------------CCHHHHTTCBBCHHHHTTT
T ss_pred HhccCCCCHHHHHHHHHHhCCCCCC-------------CCcCccccChhCHHHHHHH
Confidence 9999 89999999999999986542 2445899999999999974
No 14
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=9.5e-41 Score=344.12 Aligned_cols=214 Identities=26% Similarity=0.304 Sum_probs=174.7
Q ss_pred CCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHH------cCCcE
Q 041372 18 SARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSALDDAIN------DVVDI 90 (564)
Q Consensus 18 sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai~~Ai~------dgvdV 90 (564)
.+.|..||||||||||+|..+ + .| +.||||+|+|+.+|++...+ +..+++++||++|++ ++++|
T Consensus 79 ~~~d~~gHGT~VAgiia~~~~-~---~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~V 149 (327)
T 2x8j_A 79 NFSDNNGHGTHVAGTVAAAET-G---SG-----VVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRGPKGEQMRI 149 (327)
T ss_dssp CCCCSSSHHHHHHHHHHCCCC-S---SB-----CCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCCCTTSCCCSE
T ss_pred CCCCCCCchHHHHHHHhccCC-C---CC-----cEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhcccccCCceE
Confidence 467999999999999999842 2 12 37999999999999987654 567889999999999 89999
Q ss_pred EEEccCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCCC------CCccccCCceEEeeeeccCCceeeEEEecCC
Q 041372 91 LSLSFGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIFP------GTATNVAPGILTVAASSVDRKSYSNIYLGNS 164 (564)
Q Consensus 91 In~SlG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~~------~~~~~~ap~vitVga~~~~~~~~~~~~lg~~ 164 (564)
||||||.... ...+..++.+|.++|++||+||||+|.. ...+...|++|+|||++.
T Consensus 150 in~S~G~~~~-----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~------------- 211 (327)
T 2x8j_A 150 ITMSLGGPTD-----SEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDF------------- 211 (327)
T ss_dssp EEECEEBSCC-----CHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECT-------------
T ss_pred EEECCCcCCC-----CHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECC-------------
Confidence 9999997542 3567778889999999999999999832 234556677777776431
Q ss_pred eEEeceecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHH
Q 041372 165 KILKGSSLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIF 244 (564)
Q Consensus 165 ~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~ 244 (564)
T Consensus 212 -------------------------------------------------------------------------------- 211 (327)
T 2x8j_A 212 -------------------------------------------------------------------------------- 211 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCceEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCC
Q 041372 245 VRESGGVGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITA 324 (564)
Q Consensus 245 ~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kP 324 (564)
.+.++.||++|| +|
T Consensus 212 ---------------------------------------------------------------~~~~~~fS~~G~---~~ 225 (327)
T 2x8j_A 212 ---------------------------------------------------------------DLRLSDFTNTNE---EI 225 (327)
T ss_dssp ---------------------------------------------------------------TCCBSCC---CC---CC
T ss_pred ---------------------------------------------------------------CCCCCCccCCCC---Cc
Confidence 123478999998 67
Q ss_pred cEEcCCCcccccccCCcceEEEeccccchhhHHHHHHHHHhh-----CCCCCHHHHHHHHHhccccccCCcccccCCCCC
Q 041372 325 DIIRSPVAIEATAEQSVDYNIISGTSMSCPHVSAVAAIIKSH-----HPSWSPAAIMSAIMTTATVLNNNQQQIRRDPNG 399 (564)
Q Consensus 325 dI~aPg~~i~s~~~~~~~y~~~SGTSMAaP~VAG~aALl~q~-----~P~~sp~~IksaL~~TA~~~~~~~~~i~~~~~~ 399 (564)
||.|||..|+++.+. ..|..++|||||||||||++|||+|+ +|.|++.+||.+|++||.++.
T Consensus 226 di~APG~~i~s~~~~-~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g------------ 292 (327)
T 2x8j_A 226 DIVAPGVGIKSTYLD-SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIG------------ 292 (327)
T ss_dssp SEEEECSSEEEECST-TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCS------------
T ss_pred eEecCcCceEeecCC-CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCC------------
Confidence 999999999988765 48999999999999999999999999 999999999999999998763
Q ss_pred CCCCCCCCCCCCccccccCC
Q 041372 400 SQTTPFDNGSGHINQVAAMN 419 (564)
Q Consensus 400 ~~~~~~~~GaG~Vn~~~A~~ 419 (564)
...+.+|+|+||+.+|++
T Consensus 293 --~~~~~~G~G~vd~~~A~~ 310 (327)
T 2x8j_A 293 --FTAQAEGNGFLTLDLVER 310 (327)
T ss_dssp --SCHHHHTTCEECTTHHHH
T ss_pred --CCCCceeeeEECHHHHHH
Confidence 134589999999999996
No 15
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=1.9e-40 Score=334.67 Aligned_cols=214 Identities=25% Similarity=0.310 Sum_probs=177.5
Q ss_pred CCCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHHcCCcEEEEcc
Q 041372 17 RSARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSALDDAINDVVDILSLSF 95 (564)
Q Consensus 17 ~sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai~~Ai~dgvdVIn~Sl 95 (564)
..|.|..||||||||||+|...++. | +.||||+|+|+.+|++...+ +..+++++||++|+++|++||||||
T Consensus 63 ~~~~d~~gHGT~vAgiia~~~~n~~---g-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~~Vin~S~ 134 (279)
T 1thm_A 63 STPQNGNGHGTHCAGIAAAVTNNST---G-----IAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISLSL 134 (279)
T ss_dssp SCCCCSSSHHHHHHHHHHCCCSSSS---S-----CCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCCCcHHHHHHHHhCccCCCC---c-----cEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHHCCCCEEEEec
Confidence 3578999999999999999865432 2 37999999999999987654 5678899999999999999999999
Q ss_pred CCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCC-CCCccccCCceEEeeeeccCCceeeEEEecCCeEEeceecCC
Q 041372 96 GPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIF-PGTATNVAPGILTVAASSVDRKSYSNIYLGNSKILKGSSLNP 174 (564)
Q Consensus 96 G~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~-~~~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~g~~~~~ 174 (564)
|.... ...+..++.++.++|+++|+||||+|. ....+...|++|+||+++.
T Consensus 135 G~~~~-----~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~----------------------- 186 (279)
T 1thm_A 135 GGTVG-----NSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ----------------------- 186 (279)
T ss_dssp CBSSC-----CHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT-----------------------
T ss_pred CCCCC-----CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC-----------------------
Confidence 97642 356777888999999999999999983 3345566777888876421
Q ss_pred CCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHhcCceEEE
Q 041372 175 LETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRESGGVGMI 254 (564)
Q Consensus 175 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~~Ga~g~i 254 (564)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcEEcCCCccc
Q 041372 255 LIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADIIRSPVAIE 334 (564)
Q Consensus 255 ~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI~aPg~~i~ 334 (564)
.+.++.||++||. |||.|||..|+
T Consensus 187 -----------------------------------------------------~~~~~~fS~~G~~---~dv~APG~~i~ 210 (279)
T 1thm_A 187 -----------------------------------------------------NDNKSSFSTYGSW---VDVAAPGSSIY 210 (279)
T ss_dssp -----------------------------------------------------TSCBCTTCCCCTT---CCEEEECSSEE
T ss_pred -----------------------------------------------------CCCcCCcCCCCCc---eEEEEcCCCeE
Confidence 1234789999974 69999999999
Q ss_pred ccccCCcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCcccccCCCCCCCCCCCCCCCCCccc
Q 041372 335 ATAEQSVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLNNNQQQIRRDPNGSQTTPFDNGSGHINQ 414 (564)
Q Consensus 335 s~~~~~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~~~~~~i~~~~~~~~~~~~~~GaG~Vn~ 414 (564)
++.+. ..|..++|||||||||||++||| ++|.+++.+||.+|++||+++...+ ..||+|+||+
T Consensus 211 s~~~~-~~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~--------------~~~G~G~vn~ 273 (279)
T 1thm_A 211 STYPT-STYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG--------------TYWAKGRVNA 273 (279)
T ss_dssp EEETT-TEEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT--------------TTBSSEECCH
T ss_pred EEeCC-CCEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC--------------ccccCCeeCH
Confidence 88775 48999999999999999999999 5899999999999999999775321 3689999999
Q ss_pred cccCC
Q 041372 415 VAAMN 419 (564)
Q Consensus 415 ~~A~~ 419 (564)
.+|++
T Consensus 274 ~~A~~ 278 (279)
T 1thm_A 274 YKAVQ 278 (279)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99974
No 16
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=9.6e-41 Score=369.73 Aligned_cols=231 Identities=25% Similarity=0.254 Sum_probs=186.4
Q ss_pred CCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecC------CC-CCHHHHHHHHHHHHHcCCcEE
Q 041372 19 ARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWF------NL-CYDADILSALDDAINDVVDIL 91 (564)
Q Consensus 19 p~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~------~~-~~~~di~~Ai~~Ai~dgvdVI 91 (564)
+.|.+||||||||||+|.. ++ .| +.||||+|+|+.+|++.. .+ ..++.+++||+||+++|+|||
T Consensus 194 ~~d~~gHGThVAGiIAa~~-ng---~g-----v~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVI 264 (671)
T 1r6v_A 194 SSYGGSAGTHVAGTIAAKK-DG---KG-----IVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVM 264 (671)
T ss_dssp CCTTCSHHHHHHHHHHCCC-SS---SS-----CCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEE
T ss_pred CccCCCcchhhhhhhhccC-CC---Cc-----eEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEE
Confidence 4567899999999999974 22 12 379999999999999875 12 335679999999999999999
Q ss_pred EEccCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCCC--CCccccCCceEEeeeeccCCceeeEEEecCCeEEec
Q 041372 92 SLSFGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIFP--GTATNVAPGILTVAASSVDRKSYSNIYLGNSKILKG 169 (564)
Q Consensus 92 n~SlG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~~--~~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~g 169 (564)
|||||+.. ....+..++.+|.++|+++|+||||+|.. ...+...|++|+|||++.+..
T Consensus 265 N~SlG~~~-----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~--------------- 324 (671)
T 1r6v_A 265 NHSWGGWG-----YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG--------------- 324 (671)
T ss_dssp EECEEBSC-----CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT---------------
T ss_pred EeCCCCCC-----CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC---------------
Confidence 99999753 23567788889999999999999999843 345677889999998632100
Q ss_pred eecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHhcC
Q 041372 170 SSLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRESG 249 (564)
Q Consensus 170 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~~G 249 (564)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcEEcC
Q 041372 250 GVGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADIIRS 329 (564)
Q Consensus 250 a~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI~aP 329 (564)
...++.||++||. +||.||
T Consensus 325 ----------------------------------------------------------~~~~a~fSn~G~~---vdv~AP 343 (671)
T 1r6v_A 325 ----------------------------------------------------------TFRVAGFSSRSDG---VSVGAP 343 (671)
T ss_dssp ----------------------------------------------------------EEEECSSSCCCTT---EEEEEE
T ss_pred ----------------------------------------------------------ceeeccccCCCCC---eeEEec
Confidence 0024789999996 499999
Q ss_pred CCcccccccC-----------------CcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCccc
Q 041372 330 PVAIEATAEQ-----------------SVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLNNNQQQ 392 (564)
Q Consensus 330 g~~i~s~~~~-----------------~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~~~~~~ 392 (564)
|..|+++.+. +..|..++|||||||||||++|||+|++|+|+|.+||++|++||.+++..
T Consensus 344 G~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~--- 420 (671)
T 1r6v_A 344 GVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGN--- 420 (671)
T ss_dssp CSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSS---
T ss_pred CCCEEeecCCCCccccccccccccccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCC---
Confidence 9999987652 23799999999999999999999999999999999999999999976532
Q ss_pred ccCCCCCCCCCCCCCCCCCccccccCCCCeeeecCchhh
Q 041372 393 IRRDPNGSQTTPFDNGSGHINQVAAMNPGLIYDFDSHDI 431 (564)
Q Consensus 393 i~~~~~~~~~~~~~~GaG~Vn~~~A~~pglv~d~~~~dy 431 (564)
.....||+|+||+.+|++..|..+....||
T Consensus 421 ---------g~d~~~G~G~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 421 ---------GWDHDTGYGLVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp ---------SCBTTTBTCBCCHHHHHHCCCCSSSEEEEE
T ss_pred ---------CCCCCcccceeCHHHHhhhhcCCCCCccce
Confidence 234589999999999999877766555444
No 17
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=5.3e-41 Score=355.09 Aligned_cols=213 Identities=26% Similarity=0.349 Sum_probs=179.3
Q ss_pred CCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHHc-----------
Q 041372 19 ARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSALDDAIND----------- 86 (564)
Q Consensus 19 p~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai~~Ai~d----------- 86 (564)
+.|+.||||||||||+|.. ++ .| +.||||+|+|+.+|+++..+ +..+++++||+||+++
T Consensus 144 ~~d~~gHGT~vAgiia~~~-n~---~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~ 214 (395)
T 2z2z_A 144 CADQNGHGTHVIGTIAALN-ND---IG-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDG 214 (395)
T ss_dssp HBCSSSHHHHHHHHHHCCC-SS---SS-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSS
T ss_pred CCCCCCCHHHHHHHHHeec-CC---Cc-----eEEECCCCEEEEEEEecCCCCccHHHHHHHHHHHHhCccccccccccc
Confidence 5789999999999999983 22 12 37999999999999997654 5678899999999998
Q ss_pred ---------CCcEEEEccCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCC-CCCccccCCceEEeeeeccCCcee
Q 041372 87 ---------VVDILSLSFGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIF-PGTATNVAPGILTVAASSVDRKSY 156 (564)
Q Consensus 87 ---------gvdVIn~SlG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~-~~~~~~~ap~vitVga~~~~~~~~ 156 (564)
+++|||||||.... ...+..++.+|.++|++||+||||+|. ....+..+|++|+|||++.
T Consensus 215 ~~~~~~~~~~~~Vin~S~G~~~~-----~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~----- 284 (395)
T 2z2z_A 215 IIAGDPDDDAAEVISMSLGGPAD-----DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDS----- 284 (395)
T ss_dssp CCTTCTTSCCCSEEEECEEBSCC-----CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT-----
T ss_pred cccccccCCCCeEEEecCCCCCC-----CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecC-----
Confidence 99999999997542 356777888899999999999999983 3456677888999987531
Q ss_pred eEEEecCCeEEeceecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCc
Q 041372 157 SNIYLGNSKILKGSSLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTD 236 (564)
Q Consensus 157 ~~~~lg~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~ 236 (564)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHhcCceEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCccccccc
Q 041372 237 NRREKCIFVRESGGVGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSS 316 (564)
Q Consensus 237 ~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS 316 (564)
.+.++.||+
T Consensus 285 -----------------------------------------------------------------------~~~~a~fS~ 293 (395)
T 2z2z_A 285 -----------------------------------------------------------------------NDNIASFSN 293 (395)
T ss_dssp -----------------------------------------------------------------------TSCBCTTSC
T ss_pred -----------------------------------------------------------------------CCCCCcccC
Confidence 123478999
Q ss_pred CCCCCCCCcEEcCCCcccccccCCcceEEEeccccchhhHHHHHHHHHhhCC-------------CCCHHHHHHHHHhcc
Q 041372 317 MGPNIITADIIRSPVAIEATAEQSVDYNIISGTSMSCPHVSAVAAIIKSHHP-------------SWSPAAIMSAIMTTA 383 (564)
Q Consensus 317 ~GP~~~kPdI~aPg~~i~s~~~~~~~y~~~SGTSMAaP~VAG~aALl~q~~P-------------~~sp~~IksaL~~TA 383 (564)
||| +|.|||..|+++.+. ..|..++|||||||||||++|||+|++| .|++.+||++|++||
T Consensus 294 ~G~-----~v~APG~~i~s~~~~-~~y~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA 367 (395)
T 2z2z_A 294 RQP-----EVSAPGVDILSTYPD-DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITA 367 (395)
T ss_dssp SSC-----SEEEECSSEEEEETT-TEEEEEESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHS
T ss_pred CCC-----CEEeCCCCeeeecCC-CceEecCCHHHHHHHHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhc
Confidence 998 579999999998875 4899999999999999999999999999 999999999999999
Q ss_pred ccccCCcccccCCCCCCCCCCCCCCCCCccccccCC
Q 041372 384 TVLNNNQQQIRRDPNGSQTTPFDNGSGHINQVAAMN 419 (564)
Q Consensus 384 ~~~~~~~~~i~~~~~~~~~~~~~~GaG~Vn~~~A~~ 419 (564)
.++... .....||+|+||+.+|++
T Consensus 368 ~~~~~~------------g~~~~~G~G~vd~~~A~~ 391 (395)
T 2z2z_A 368 DDLGPT------------GWDADYGYGVVRAALAVQ 391 (395)
T ss_dssp BCCSSS------------SSBTTTBTCBCCHHHHHH
T ss_pred cccCCC------------CCCCCccCceeCHHHHHH
Confidence 976522 234689999999999986
No 18
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=5.3e-41 Score=349.40 Aligned_cols=222 Identities=19% Similarity=0.111 Sum_probs=180.2
Q ss_pred CCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCCCCHHHHHHHHHHHHHc------CCcEE
Q 041372 18 SARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNLCYDADILSALDDAIND------VVDIL 91 (564)
Q Consensus 18 sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~~~~~di~~Ai~~Ai~d------gvdVI 91 (564)
.+.|..||||||||||+|. .|+ .||||+|+|+.+|++...+.. ++++||++|+++ |++||
T Consensus 82 ~~~d~~gHGT~vAgiia~~-------~g~-----~GvAp~a~l~~~~v~~~~~~~--~~~~ai~~a~~~~~~~~~~~~Vi 147 (347)
T 2iy9_A 82 KSEALYIHGTAMASLIASR-------YGI-----YGVYPHALISSRRVIPDGVQD--SWIRAIESIMSNVFLAPGEEKII 147 (347)
T ss_dssp SSHHHHHHHHHHHHHHHCS-------SSS-----CCSSTTCEEEEEECCSSBCTT--HHHHHHHHHHTCTTSCTTEEEEE
T ss_pred CCCCCCCcHHHHHHHHhcc-------cCC-----cccCCCCEEEEEEEecCCCHH--HHHHHHHHHHhhhhcccCCceEE
Confidence 5678899999999999998 122 799999999999998765433 899999999999 99999
Q ss_pred EEccCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCCC--------CCccccCC----------ceEEeeeeccC-
Q 041372 92 SLSFGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIFP--------GTATNVAP----------GILTVAASSVD- 152 (564)
Q Consensus 92 n~SlG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~~--------~~~~~~ap----------~vitVga~~~~- 152 (564)
|||||..... ...+.+..++.++.++|++||+||||+|.. ...+...| ++|+|||++..
T Consensus 148 n~S~G~~~~~--~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~~~~ 225 (347)
T 2iy9_A 148 NISGGQKGVA--SASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQYR 225 (347)
T ss_dssp EESSCBCCC---CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEECCCC
T ss_pred EeccccCCCC--CcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEcccCC
Confidence 9999975421 245677888899999999999999999842 23455566 77777765420
Q ss_pred -CceeeEEEecCCeEEeceecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEe
Q 041372 153 -RKSYSNIYLGNSKILKGSSLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTI 231 (564)
Q Consensus 153 -~~~~~~~~lg~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~ 231 (564)
...
T Consensus 226 ~g~~---------------------------------------------------------------------------- 229 (347)
T 2iy9_A 226 KGET---------------------------------------------------------------------------- 229 (347)
T ss_dssp TTSC----------------------------------------------------------------------------
T ss_pred CCce----------------------------------------------------------------------------
Confidence 000
Q ss_pred cCCCchhHHHHHHHHhcCceEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcc
Q 041372 232 EASTDNRREKCIFVRESGGVGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEM 311 (564)
Q Consensus 232 ~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~v 311 (564)
......+
T Consensus 230 -------------------------------------------------------------------------~~~~~~~ 236 (347)
T 2iy9_A 230 -------------------------------------------------------------------------PVLHGGG 236 (347)
T ss_dssp -------------------------------------------------------------------------CCBCCCS
T ss_pred -------------------------------------------------------------------------ecccCCC
Confidence 0001234
Q ss_pred cccccCCCCCCCCcEEcCCCcccccccCCcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCcc
Q 041372 312 AAFSSMGPNIITADIIRSPVAIEATAEQSVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLNNNQQ 391 (564)
Q Consensus 312 a~FSS~GP~~~kPdI~aPg~~i~s~~~~~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~~~~~ 391 (564)
+.||++||+ ||||.|||.+|+++.+. ..|..++|||||||||||++|||+|++|+|++.+||++|++||.++...
T Consensus 237 ~~fS~~G~~--~~di~APG~~i~s~~~~-~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~-- 311 (347)
T 2iy9_A 237 ITGSRFGNN--WVDIAAPGQNITFLRPD-AKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSL-- 311 (347)
T ss_dssp SSCBCBCTT--TCSEEEECSSEEEECTT-SCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECGGG--
T ss_pred CCCCCCCCC--CCEEEeCCCCeEeecCC-CCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCCC--
Confidence 789999997 89999999999998875 4899999999999999999999999999999999999999999977532
Q ss_pred cccCCCCCCCCCCCCCCCCCccccccCCC
Q 041372 392 QIRRDPNGSQTTPFDNGSGHINQVAAMNP 420 (564)
Q Consensus 392 ~i~~~~~~~~~~~~~~GaG~Vn~~~A~~p 420 (564)
....+|+|+||+.+|++.
T Consensus 312 -----------~~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 312 -----------VDKVTEGRVLNAEKAISM 329 (347)
T ss_dssp -----------TTTSGGGEECCHHHHHHH
T ss_pred -----------CCccccCCEecHHHHHHH
Confidence 125899999999999974
No 19
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=2e-40 Score=344.11 Aligned_cols=218 Identities=29% Similarity=0.357 Sum_probs=180.5
Q ss_pred CCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCCCCHHHHHHHHHHHHH----------cCC
Q 041372 19 ARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNLCYDADILSALDDAIN----------DVV 88 (564)
Q Consensus 19 p~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~~~~~di~~Ai~~Ai~----------dgv 88 (564)
+.|..||||||||||+|...++. | +.||||+|+|+.+|++...++..+++++||++|++ .++
T Consensus 98 ~~d~~gHGT~vAgiia~~~~~~~---g-----~~GvAp~a~l~~~~v~~~~~~~~~~~~~ai~~a~~~~~~~~~~~~~~~ 169 (340)
T 3lpc_A 98 RSDSSWHGSHVAGTIAAVTNNRI---G-----VAGVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGRIAGIPENRNPA 169 (340)
T ss_dssp CBCCCCHHHHHHHHHHCCCSSSS---S-----CCCTTTTSEEEEEECCBTTBCCHHHHHHHHHHHHTCCCTTSCCCSSCC
T ss_pred CCCCCCCHHHHHHHHHccCCCCC---c-----ceeecCCCEEEEEEEecCCCCcHHHHHHHHHHHhcccccccccccCCC
Confidence 57889999999999999865432 2 37999999999999998777888999999999998 899
Q ss_pred cEEEEccCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCCCC--CccccCCceEEeeeeccCCceeeEEEecCCeE
Q 041372 89 DILSLSFGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIFPG--TATNVAPGILTVAASSVDRKSYSNIYLGNSKI 166 (564)
Q Consensus 89 dVIn~SlG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~~~--~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~ 166 (564)
+|||||||.... ....+..++.++.++|++||+||||+|... ..+...|++|+|||++.
T Consensus 170 ~Vin~S~G~~~~----~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------------- 230 (340)
T 3lpc_A 170 KVINMSLGSDGQ----CSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTS--------------- 230 (340)
T ss_dssp SEEEECCCEESC----CCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECT---------------
T ss_pred eEEEeCcCCCCC----cchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCC---------------
Confidence 999999997532 234567778889999999999999998432 34566778888887431
Q ss_pred EeceecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHH
Q 041372 167 LKGSSLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVR 246 (564)
Q Consensus 167 ~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~ 246 (564)
T Consensus 231 -------------------------------------------------------------------------------- 230 (340)
T 3lpc_A 231 -------------------------------------------------------------------------------- 230 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCceEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcE
Q 041372 247 ESGGVGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADI 326 (564)
Q Consensus 247 ~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI 326 (564)
.+.++.||++|| ||||
T Consensus 231 -------------------------------------------------------------~~~~~~~S~~g~---~~di 246 (340)
T 3lpc_A 231 -------------------------------------------------------------RGIRASFSNYGV---DVDL 246 (340)
T ss_dssp -------------------------------------------------------------TSSBCTTCCBST---TCCE
T ss_pred -------------------------------------------------------------CCCcCCCCCCCC---CceE
Confidence 123478999998 7899
Q ss_pred EcCCCcccccccCC------cceEEEeccccchhhHHHHHHHHHhh-C---CCCCHHHHHHHHHhccccccCCcccccCC
Q 041372 327 IRSPVAIEATAEQS------VDYNIISGTSMSCPHVSAVAAIIKSH-H---PSWSPAAIMSAIMTTATVLNNNQQQIRRD 396 (564)
Q Consensus 327 ~aPg~~i~s~~~~~------~~y~~~SGTSMAaP~VAG~aALl~q~-~---P~~sp~~IksaL~~TA~~~~~~~~~i~~~ 396 (564)
.|||..|.++...+ ..|..++|||||||||||++|||+|+ + |.|++.+||.+|++||.++..
T Consensus 247 ~ApG~~i~s~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~-------- 318 (340)
T 3lpc_A 247 AAPGQDILSTVDSGTRRPVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNG-------- 318 (340)
T ss_dssp EEECSSEEEEEESCSSSCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSS--------
T ss_pred EecCCCeecccCCCCcCCCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCC--------
Confidence 99999998876542 35999999999999999999999998 5 999999999999999987641
Q ss_pred CCCCCCCCCCCCCCCccccccCCC
Q 041372 397 PNGSQTTPFDNGSGHINQVAAMNP 420 (564)
Q Consensus 397 ~~~~~~~~~~~GaG~Vn~~~A~~p 420 (564)
.....||+|+||+.+|++.
T Consensus 319 -----~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 319 -----RLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp -----CCSSCCCSSBCCHHHHHHH
T ss_pred -----CCCCCcccceecHHHHHHH
Confidence 1345899999999999864
No 20
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=1.4e-39 Score=333.55 Aligned_cols=228 Identities=30% Similarity=0.356 Sum_probs=181.6
Q ss_pred CCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHHcCC-----cEE
Q 041372 18 SARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSALDDAINDVV-----DIL 91 (564)
Q Consensus 18 sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai~~Ai~dgv-----dVI 91 (564)
.+.|..||||||||||+|....+ ...+.||||+|+|+.+|++...+ +..+++++||++|+++++ +||
T Consensus 64 ~~~d~~gHGT~vAgiia~~~~~n-------~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~Vi 136 (310)
T 2ixt_A 64 SCTDRNGHGTHVAGTALADGGSD-------QAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTKTII 136 (310)
T ss_dssp CCCCSSSHHHHHHHHHHCBCCTT-------SCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCCCCCHHHHHHHHhccCCCC-------CCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhhhccCCCeEE
Confidence 35789999999999999985221 11247999999999999987654 567889999999999988 999
Q ss_pred EEccCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCC---CCCccccCCceEEeeeeccCCceeeEEEecCCeEEe
Q 041372 92 SLSFGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIF---PGTATNVAPGILTVAASSVDRKSYSNIYLGNSKILK 168 (564)
Q Consensus 92 n~SlG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~---~~~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~ 168 (564)
|||||.... ...+..++.++.++|++||+||||+|. ....+...|++|+||+.+....
T Consensus 137 n~S~G~~~~-----~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~-------------- 197 (310)
T 2ixt_A 137 SMSLGSSAN-----NSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ-------------- 197 (310)
T ss_dssp EECCCBSSC-----CHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE--------------
T ss_pred EEcCCCCCC-----CHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc--------------
Confidence 999997542 356777888999999999999999983 2345667889999998541000
Q ss_pred ceecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHhc
Q 041372 169 GSSLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRES 248 (564)
Q Consensus 169 g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~~ 248 (564)
.|
T Consensus 198 ------------------------------------------------------~g------------------------ 199 (310)
T 2ixt_A 198 ------------------------------------------------------NG------------------------ 199 (310)
T ss_dssp ------------------------------------------------------TT------------------------
T ss_pred ------------------------------------------------------CC------------------------
Confidence 00
Q ss_pred CceEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCC-------
Q 041372 249 GGVGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNI------- 321 (564)
Q Consensus 249 Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~------- 321 (564)
...++.||++||..
T Consensus 200 -----------------------------------------------------------~~~~~~~S~~G~~~~~g~~~~ 220 (310)
T 2ixt_A 200 -----------------------------------------------------------TYRVADYSSRGYISTAGDYVI 220 (310)
T ss_dssp -----------------------------------------------------------EEEECTTSCCCCTTTTTSSSC
T ss_pred -----------------------------------------------------------CeeeccccCCCCccCCccccc
Confidence 00246788888842
Q ss_pred --CCCcEEcCCCcccccccCCcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCcccccCCCCC
Q 041372 322 --ITADIIRSPVAIEATAEQSVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLNNNQQQIRRDPNG 399 (564)
Q Consensus 322 --~kPdI~aPg~~i~s~~~~~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~~~~~~i~~~~~~ 399 (564)
.||||.|||..|+++... ..|..++|||||||||||++|||+|++|+|++.+||++|++||++++..+. ...
T Consensus 221 ~~~~~di~ApG~~i~s~~~~-~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~-----~~a 294 (310)
T 2ixt_A 221 QEGDIEISAPGSSVYSTWYN-GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGG-----YGA 294 (310)
T ss_dssp CTTCCCEEEECSSEEEECTT-SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBS-----TTC
T ss_pred cCCCeeEECCCCCEeeecCC-CCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCC-----ccc
Confidence 499999999999988765 489999999999999999999999999999999999999999998764321 112
Q ss_pred CCCCCCCCCCCCccc
Q 041372 400 SQTTPFDNGSGHINQ 414 (564)
Q Consensus 400 ~~~~~~~~GaG~Vn~ 414 (564)
.+...+.+|+|++|.
T Consensus 295 ~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 295 AIGDDYASGFGFARV 309 (310)
T ss_dssp CSSSBTTTBTCBCCC
T ss_pred ccCCccccccceeec
Confidence 345678999999985
No 21
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=1.9e-40 Score=339.38 Aligned_cols=224 Identities=23% Similarity=0.230 Sum_probs=179.6
Q ss_pred CCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCC--CCCHHHHHHHHHHHHHcCCcEEEEcc
Q 041372 18 SARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFN--LCYDADILSALDDAINDVVDILSLSF 95 (564)
Q Consensus 18 sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~--~~~~~di~~Ai~~Ai~dgvdVIn~Sl 95 (564)
...|.+||||||||||+|+... .+.||||+|+|+.+|++.+. .+...++++||+||+++|++|||+||
T Consensus 57 ~~~d~~gHGThVAGiiag~~~~----------~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~s~ 126 (306)
T 4h6w_A 57 ANGSMSTHGTHVASIIFGQHDS----------PVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINVSA 126 (306)
T ss_dssp --CCCCHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCCchHHHHHHHHccccC----------CcceeccccccceeeccccccccchHHHHHHHHHHhhcccceeeeccc
Confidence 3457889999999999997532 23799999999999998654 35677899999999999999999999
Q ss_pred CCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCC-CCCccccCCceEEeeeeccCCceeeEEEecCCeEEeceecCC
Q 041372 96 GPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIF-PGTATNVAPGILTVAASSVDRKSYSNIYLGNSKILKGSSLNP 174 (564)
Q Consensus 96 G~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~-~~~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~g~~~~~ 174 (564)
|...... .....+..++.++.++|+++|++|||+|. ....+...+++|+|+|++.
T Consensus 127 g~~~~~~-~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~----------------------- 182 (306)
T 4h6w_A 127 GQLTDAG-EADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDD----------------------- 182 (306)
T ss_dssp CEEESSS-CCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECT-----------------------
T ss_pred cccccCC-CccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecC-----------------------
Confidence 9643221 23456778888999999999999999983 2334456677777776421
Q ss_pred CCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHhcCceEEE
Q 041372 175 LETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRESGGVGMI 254 (564)
Q Consensus 175 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~~Ga~g~i 254 (564)
T Consensus 183 -------------------------------------------------------------------------------- 182 (306)
T 4h6w_A 183 -------------------------------------------------------------------------------- 182 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcEEcCCCccc
Q 041372 255 LIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADIIRSPVAIE 334 (564)
Q Consensus 255 ~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI~aPg~~i~ 334 (564)
...++.||++|+...||||.|||..|+
T Consensus 183 -----------------------------------------------------~~~~~~~s~~g~~~~~~di~APG~~i~ 209 (306)
T 4h6w_A 183 -----------------------------------------------------QGKPVDFSNWGDAYQKQGILAPGKDIL 209 (306)
T ss_dssp -----------------------------------------------------TSCBCSSSCBCHHHHHHEEEEECSSEE
T ss_pred -----------------------------------------------------CCCccccccccCCcCcceeecCCcCcc
Confidence 122367888888778899999999999
Q ss_pred ccccCCcceEEEeccccchhhHHHHHHHHHh----hCCCCCHHHHHHHHHhccccccCCcccccCCCCCCCCCCCCCCCC
Q 041372 335 ATAEQSVDYNIISGTSMSCPHVSAVAAIIKS----HHPSWSPAAIMSAIMTTATVLNNNQQQIRRDPNGSQTTPFDNGSG 410 (564)
Q Consensus 335 s~~~~~~~y~~~SGTSMAaP~VAG~aALl~q----~~P~~sp~~IksaL~~TA~~~~~~~~~i~~~~~~~~~~~~~~GaG 410 (564)
++.+.+ .|..++|||||||||||++|||++ ++|.|+|+|||.+|++||++++..+ ......||+|
T Consensus 210 s~~~~~-~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~----------~~~~~~~G~G 278 (306)
T 4h6w_A 210 GAKPNG-GTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD----------TDDQSRCLMG 278 (306)
T ss_dssp EECTTS-CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT----------CSCGGGGTTC
T ss_pred cccCCC-ceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC----------CCCCCCccee
Confidence 988764 899999999999999999999986 4699999999999999999876322 1233478999
Q ss_pred CccccccCC
Q 041372 411 HINQVAAMN 419 (564)
Q Consensus 411 ~Vn~~~A~~ 419 (564)
+||+.+|++
T Consensus 279 ~ln~~~Av~ 287 (306)
T 4h6w_A 279 KLNILDAIE 287 (306)
T ss_dssp BCCHHHHHH
T ss_pred ecCHHHHHH
Confidence 999999996
No 22
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=9e-40 Score=336.18 Aligned_cols=213 Identities=26% Similarity=0.353 Sum_probs=176.8
Q ss_pred CCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHHc-----------
Q 041372 19 ARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSALDDAIND----------- 86 (564)
Q Consensus 19 p~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai~~Ai~d----------- 86 (564)
+.|..||||||||||+|.. ++ .| +.||||+|+|+.+|++...+ +..+++++||++|+++
T Consensus 69 ~~d~~gHGT~vAgiia~~~-n~---~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~ 139 (320)
T 2z30_A 69 CADQNGHGTHVIGTIAALN-ND---IG-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDG 139 (320)
T ss_dssp HBCSSSHHHHHHHHHHCCS-SS---BS-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSCTTSSS
T ss_pred CCCCCCCHHHHHHHHHccc-CC---Cc-----eEeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHhCccccccccccc
Confidence 4789999999999999973 21 12 37999999999999987654 5678899999999987
Q ss_pred ---------CCcEEEEccCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCC-CCCccccCCceEEeeeeccCCcee
Q 041372 87 ---------VVDILSLSFGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIF-PGTATNVAPGILTVAASSVDRKSY 156 (564)
Q Consensus 87 ---------gvdVIn~SlG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~-~~~~~~~ap~vitVga~~~~~~~~ 156 (564)
+++|||||||.... ...+..++.++.++|++||+||||+|. ....+...|++|+|||++.
T Consensus 140 ~~~~~~~~~~~~Vin~S~G~~~~-----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~----- 209 (320)
T 2z30_A 140 IIAGDPDDDAAEVISMSLGGPAD-----DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDS----- 209 (320)
T ss_dssp CCTTCTTSCCCSEEEECEEBSCC-----CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT-----
T ss_pred ccccccccCCceEEEecCCCCCC-----CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEeeCC-----
Confidence 99999999997542 356677788899999999999999983 3455667788888887531
Q ss_pred eEEEecCCeEEeceecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCc
Q 041372 157 SNIYLGNSKILKGSSLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTD 236 (564)
Q Consensus 157 ~~~~lg~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~ 236 (564)
T Consensus 210 -------------------------------------------------------------------------------- 209 (320)
T 2z30_A 210 -------------------------------------------------------------------------------- 209 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHhcCceEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCccccccc
Q 041372 237 NRREKCIFVRESGGVGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSS 316 (564)
Q Consensus 237 ~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS 316 (564)
.+.++.||+
T Consensus 210 -----------------------------------------------------------------------~~~~~~~S~ 218 (320)
T 2z30_A 210 -----------------------------------------------------------------------NDNIASFSN 218 (320)
T ss_dssp -----------------------------------------------------------------------TSCBCTTSC
T ss_pred -----------------------------------------------------------------------CCCcCcccC
Confidence 113477999
Q ss_pred CCCCCCCCcEEcCCCcccccccCCcceEEEeccccchhhHHHHHHHHHhhC-------------CCCCHHHHHHHHHhcc
Q 041372 317 MGPNIITADIIRSPVAIEATAEQSVDYNIISGTSMSCPHVSAVAAIIKSHH-------------PSWSPAAIMSAIMTTA 383 (564)
Q Consensus 317 ~GP~~~kPdI~aPg~~i~s~~~~~~~y~~~SGTSMAaP~VAG~aALl~q~~-------------P~~sp~~IksaL~~TA 383 (564)
+|| +|.|||..|+++.+. ..|..++|||||||||||++|||+|++ |+|++.+||.+|++||
T Consensus 219 ~g~-----~v~APG~~i~s~~~~-~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~ta 292 (320)
T 2z30_A 219 RQP-----EVSAPGVDILSTYPD-DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITA 292 (320)
T ss_dssp SSC-----SEEEECSSEEEEETT-TEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHHHHS
T ss_pred CCC-----CEEeCCCCeEEeccC-CCeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHHHhhC
Confidence 987 689999999988765 489999999999999999999999999 9999999999999999
Q ss_pred ccccCCcccccCCCCCCCCCCCCCCCCCccccccCC
Q 041372 384 TVLNNNQQQIRRDPNGSQTTPFDNGSGHINQVAAMN 419 (564)
Q Consensus 384 ~~~~~~~~~i~~~~~~~~~~~~~~GaG~Vn~~~A~~ 419 (564)
.++... .....||+|+||+.+|++
T Consensus 293 ~~~~~~------------g~~~~~G~G~vd~~~A~~ 316 (320)
T 2z30_A 293 DDLGPT------------GWDADYGYGVVRAALAVQ 316 (320)
T ss_dssp BCCSSS------------SSBTTTBTCBCCHHHHHH
T ss_pred ccCCCC------------CCCCCcCCceeCHHHHHH
Confidence 876421 234579999999999985
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=3.6e-39 Score=345.38 Aligned_cols=233 Identities=24% Similarity=0.303 Sum_probs=183.7
Q ss_pred CCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCCC---CHHHHHHHHHHHHHcCCcEEEEc
Q 041372 18 SARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNLC---YDADILSALDDAINDVVDILSLS 94 (564)
Q Consensus 18 sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~~---~~~di~~Ai~~Ai~dgvdVIn~S 94 (564)
.+.|..||||||||||+|+.. + +.||||+|+|+.+|++...++ ..+++.++|++|+++|++|||||
T Consensus 61 ~~~d~~gHGT~VAgiiag~g~------~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a~~~g~~Vin~S 129 (434)
T 1wmd_A 61 NANDTNGHGTHVAGSVLGNGS------T-----NKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYSAGARIHTNS 129 (434)
T ss_dssp CCCCSSSHHHHHHHHHHCCSS------S-----SCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHHHHTTCSEEEEC
T ss_pred CCCCCCCcHHHHHHHHHcCCC------C-----ceeeCCCCEEEEEEeecCCCccccccHHHHHHHHHHHhcCCeEEEec
Confidence 678999999999999999642 1 379999999999999876544 34679999999999999999999
Q ss_pred cCCCCCCCCCccchhhHHHHHH-HhCCcEEEEccCCCCCC---CCccccCCceEEeeeeccCCceeeEEEecCCeEEece
Q 041372 95 FGPSPPQPIYFEDSTSIGTFHA-FQKGILVSASAGNSIFP---GTATNVAPGILTVAASSVDRKSYSNIYLGNSKILKGS 170 (564)
Q Consensus 95 lG~~~~~~~~~~~~~~~~~~~a-~~~Gv~vV~AAGN~g~~---~~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~g~ 170 (564)
||..... .+ +....++.++ .++|+++|+||||+|.. ...+..+|++|+|||++..+...
T Consensus 130 ~G~~~~~-~~--~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~-------------- 192 (434)
T 1wmd_A 130 WGAAVNG-AY--TTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF-------------- 192 (434)
T ss_dssp CCBCCTT-CC--CHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG--------------
T ss_pred CCCCcCC-cC--CHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc--------------
Confidence 9976421 12 3445555555 58999999999999842 34567889999999975422100
Q ss_pred ecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHhcCc
Q 041372 171 SLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRESGG 250 (564)
Q Consensus 171 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~~Ga 250 (564)
+ ..
T Consensus 193 ---------------~----------------------------~~---------------------------------- 195 (434)
T 1wmd_A 193 ---------------G----------------------------SY---------------------------------- 195 (434)
T ss_dssp ---------------C----------------------------GG----------------------------------
T ss_pred ---------------C----------------------------cc----------------------------------
Confidence 0 00
Q ss_pred eEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCC---CCCcEE
Q 041372 251 VGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNI---ITADII 327 (564)
Q Consensus 251 ~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~---~kPdI~ 327 (564)
....+.++.||+|||+. +||||+
T Consensus 196 ------------------------------------------------------~~~~~~~a~fS~~G~~~~g~~kpdi~ 221 (434)
T 1wmd_A 196 ------------------------------------------------------ADNINHVAQFSSRGPTKDGRIKPDVM 221 (434)
T ss_dssp ------------------------------------------------------GSCTTSBCTTSCCCCCTTSCCCCCEE
T ss_pred ------------------------------------------------------cCCCCccccccCCCCCCCCCCCceEE
Confidence 01134568999999974 899999
Q ss_pred cCCCcccccccC-----------CcceEEEeccccchhhHHHHHHHHHhhCCCC-----CHHHHHHHHHhccccccCCcc
Q 041372 328 RSPVAIEATAEQ-----------SVDYNIISGTSMSCPHVSAVAAIIKSHHPSW-----SPAAIMSAIMTTATVLNNNQQ 391 (564)
Q Consensus 328 aPg~~i~s~~~~-----------~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~-----sp~~IksaL~~TA~~~~~~~~ 391 (564)
|||.+|+++... ...|..++|||||||||||++|||+|++|++ ++++||.+|++||.++..
T Consensus 222 ApG~~i~s~~~~~~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~--- 298 (434)
T 1wmd_A 222 APGTFILSARSSLAPDSSFWANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGL--- 298 (434)
T ss_dssp EECSSEEEECCTTCCGGGSSEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSS---
T ss_pred cCCCCeEecCCCCCCCcccccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCC---
Confidence 999999887642 3589999999999999999999999999876 999999999999986431
Q ss_pred cccCCCCCCCCCCCCCCCCCccccccCCCC
Q 041372 392 QIRRDPNGSQTTPFDNGSGHINQVAAMNPG 421 (564)
Q Consensus 392 ~i~~~~~~~~~~~~~~GaG~Vn~~~A~~pg 421 (564)
....+.||+|+||+.+|+...
T Consensus 299 ---------~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 299 ---------GYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp ---------CSSCTTTTTCBCCHHHHHTCE
T ss_pred ---------CCCCccCCcCeEeHHHhcccc
Confidence 235578999999999999754
No 24
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=5.6e-38 Score=348.86 Aligned_cols=270 Identities=18% Similarity=0.126 Sum_probs=169.6
Q ss_pred CCCCcCCCCCCCCCCC-CCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCCCCH--HHHHHHHHH
Q 041372 6 GSLESINSISFRSARD-SDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNLCYD--ADILSALDD 82 (564)
Q Consensus 6 ~~~~~~~~~~~~sp~D-~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~~~~--~di~~Ai~~ 82 (564)
|..++.+..+...|+| ++||||||||||+|. .++. | +.||||+|+|+.+|+++..+... ..++++...
T Consensus 95 ~~~~~~~~~~d~~p~d~~~gHGT~vAGiiaa~-~n~~---g-----~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~ 165 (600)
T 2oxa_A 95 GSKNVVTGSDDPTPTDPDTGHGTSVSGIIAAV-DNAI---G-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDS 165 (600)
T ss_dssp CCBCTTTCSSCCCCCSTTCCHHHHHHHHHHCC-SSSS---S-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTS
T ss_pred CceeccCCCCCCCCCCCCCCCccHHHHHhhcc-cCCC---c-----ceEEccCCceEEEeeecCcccchHHHHHHHHhhh
Confidence 4455555444456676 799999999999998 3321 2 37999999999999998765442 445555555
Q ss_pred HHHcCCcEEEEccCCCCCCCCCcc---chhhHHH-HH--HHhCCcEEEEccCCCCCCCCccccCCceEEeeeeccCCcee
Q 041372 83 AINDVVDILSLSFGPSPPQPIYFE---DSTSIGT-FH--AFQKGILVSASAGNSIFPGTATNVAPGILTVAASSVDRKSY 156 (564)
Q Consensus 83 Ai~dgvdVIn~SlG~~~~~~~~~~---~~~~~~~-~~--a~~~Gv~vV~AAGN~g~~~~~~~~ap~vitVga~~~~~~~~ 156 (564)
+..+++||||||||.......... ..+..++ .. +.++|++||+||||+|...... ..
T Consensus 166 a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~---------------~~-- 228 (600)
T 2oxa_A 166 NASRDNRVFNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAG---------------GY-- 228 (600)
T ss_dssp HHHHTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEET---------------TE--
T ss_pred hcccCCeEEEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCC---------------cc--
Confidence 888999999999998643211111 1121222 22 4578999999999998311000 00
Q ss_pred eEEEecCCeEEeceecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCc
Q 041372 157 SNIYLGNSKILKGSSLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTD 236 (564)
Q Consensus 157 ~~~~lg~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~ 236 (564)
..+|-.... ......|...... .....|.
T Consensus 229 ----------------------~~~Pa~~~~-----------------~~p~~~~n~~~~~---~s~~vIt--------- 257 (600)
T 2oxa_A 229 ----------------------VLNRTGNGP-----------------KLPFENSNLDPSN---SNFWNLV--------- 257 (600)
T ss_dssp ----------------------EEEEESCSS-----------------CCCSSBTTSSGGG---GSSSEEE---------
T ss_pred ----------------------eecCccccc-----------------cccccccccCCcc---cCceeEE---------
Confidence 000000000 0000112110000 0000111
Q ss_pred hhHHHHHHHHhcCceEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCccccccc
Q 041372 237 NRREKCIFVRESGGVGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSS 316 (564)
Q Consensus 237 ~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS 316 (564)
+......+.++.||+
T Consensus 258 -----------------------------------------------------------------VgA~~~~g~~a~fS~ 272 (600)
T 2oxa_A 258 -----------------------------------------------------------------VSALNADGVRSSYSS 272 (600)
T ss_dssp -----------------------------------------------------------------EEEECTTSSBCTTCC
T ss_pred -----------------------------------------------------------------EecccCCCCcCCcCC
Confidence 111223456789999
Q ss_pred CCCCCCCCcEEcCCCcccccccC---------------------------------CcceEEEeccccchhhHHHHHHHH
Q 041372 317 MGPNIITADIIRSPVAIEATAEQ---------------------------------SVDYNIISGTSMSCPHVSAVAAII 363 (564)
Q Consensus 317 ~GP~~~kPdI~aPg~~i~s~~~~---------------------------------~~~y~~~SGTSMAaP~VAG~aALl 363 (564)
+||.. ||+|||+.+.+..+. ...|..++|||||||||||++|||
T Consensus 273 ~G~~v---dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VAGvaALl 349 (600)
T 2oxa_A 273 VGSNI---FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALL 349 (600)
T ss_dssp BCTTE---EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHH
T ss_pred CCCCe---EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHHhHHHHHHHHHH
Confidence 99986 999999886432210 123899999999999999999999
Q ss_pred HhhCCCCCHHHHHHHHHhccccccCCcccccC---C----------------CCCCCCCCCCCCCCCccccccCCC
Q 041372 364 KSHHPSWSPAAIMSAIMTTATVLNNNQQQIRR---D----------------PNGSQTTPFDNGSGHINQVAAMNP 420 (564)
Q Consensus 364 ~q~~P~~sp~~IksaL~~TA~~~~~~~~~i~~---~----------------~~~~~~~~~~~GaG~Vn~~~A~~p 420 (564)
+|+||+|++++||.+|++||++++....++.. + ........+.||+|+||+.+|++.
T Consensus 350 ~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G~vda~~Av~~ 425 (600)
T 2oxa_A 350 MSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALEL 425 (600)
T ss_dssp HHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHH
T ss_pred HHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCchhhHHHHHHH
Confidence 99999999999999999999988754322110 0 001112346899999999999974
No 25
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=5e-38 Score=316.56 Aligned_cols=189 Identities=29% Similarity=0.304 Sum_probs=161.8
Q ss_pred CCCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHHcCC-------
Q 041372 17 RSARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSALDDAINDVV------- 88 (564)
Q Consensus 17 ~sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai~~Ai~dgv------- 88 (564)
.++.|..||||||||||+|.. .||||+|+|+.+|++...+ +..+++++||+|++++++
T Consensus 61 ~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~~ 126 (279)
T 2pwa_A 61 YSSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKG 126 (279)
T ss_dssp SCSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTE
T ss_pred CCCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCCc
Confidence 357899999999999999862 5999999999999997654 678899999999999988
Q ss_pred cEEEEccCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCCCC--CccccCCceEEeeeeccCCceeeEEEecCCeE
Q 041372 89 DILSLSFGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIFPG--TATNVAPGILTVAASSVDRKSYSNIYLGNSKI 166 (564)
Q Consensus 89 dVIn~SlG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~~~--~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~ 166 (564)
+|||||||.. ..+.+..++.++.++|++||+||||+|... ..+...|++|+||+++.
T Consensus 127 ~Vin~S~G~~------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------------- 185 (279)
T 2pwa_A 127 VVASLSLGGG------YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDR--------------- 185 (279)
T ss_dssp EEEEECCCEE------CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECT---------------
T ss_pred cEEEecCCCC------CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecC---------------
Confidence 9999999964 235677888899999999999999998422 34566788888887531
Q ss_pred EeceecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHH
Q 041372 167 LKGSSLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVR 246 (564)
Q Consensus 167 ~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~ 246 (564)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 2pwa_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCceEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcE
Q 041372 247 ESGGVGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADI 326 (564)
Q Consensus 247 ~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI 326 (564)
.+.++.||+|||. |||
T Consensus 186 -------------------------------------------------------------~~~~~~~S~~G~~---~di 201 (279)
T 2pwa_A 186 -------------------------------------------------------------YDRRSSFSNYGSV---LDI 201 (279)
T ss_dssp -------------------------------------------------------------TSBBCTTCCBSTT---CCE
T ss_pred -------------------------------------------------------------CCCcCCcCCCCCc---ceE
Confidence 1234789999994 699
Q ss_pred EcCCCcccccccCCcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccc
Q 041372 327 IRSPVAIEATAEQSVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVL 386 (564)
Q Consensus 327 ~aPg~~i~s~~~~~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~ 386 (564)
.|||..|+++...+ .|..++|||||||||||++|||+|+ |++++.|||.+|++||.+.
T Consensus 202 ~APG~~i~s~~~~~-~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~ 259 (279)
T 2pwa_A 202 FGPGTDILSTWIGG-STRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKG 259 (279)
T ss_dssp EEECSSEEEEETTT-EEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEES
T ss_pred EEecCCeEEeecCC-CEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccc
Confidence 99999999887754 8999999999999999999999999 9999999999999999864
No 26
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=2.4e-37 Score=312.34 Aligned_cols=190 Identities=25% Similarity=0.339 Sum_probs=161.8
Q ss_pred CCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHHc--CCcEEEEc
Q 041372 18 SARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSALDDAIND--VVDILSLS 94 (564)
Q Consensus 18 sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai~~Ai~d--gvdVIn~S 94 (564)
.+.|..||||||||||+|.. .||||+|+|+.+|++...+ +..+++++||+|++++ +++|||||
T Consensus 63 ~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~~Vin~S 128 (284)
T 1sh7_A 63 DSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGPSVANMS 128 (284)
T ss_dssp CCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSSEEEEEC
T ss_pred CCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCCcEEEeC
Confidence 57899999999999999873 5999999999999987654 5678899999999984 79999999
Q ss_pred cCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCCC--CCccccCCceEEeeeeccCCceeeEEEecCCeEEeceec
Q 041372 95 FGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIFP--GTATNVAPGILTVAASSVDRKSYSNIYLGNSKILKGSSL 172 (564)
Q Consensus 95 lG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~~--~~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~g~~~ 172 (564)
||... ...+..++.++.++|++||+||||+|.. ...+...|++|+||+++.
T Consensus 129 ~G~~~------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------------------- 181 (284)
T 1sh7_A 129 LGGGQ------STALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS--------------------- 181 (284)
T ss_dssp CCBSC------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT---------------------
T ss_pred CCCCC------CHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC---------------------
Confidence 99752 3567788889999999999999999842 234566788888887431
Q ss_pred CCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHhcCceE
Q 041372 173 NPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRESGGVG 252 (564)
Q Consensus 173 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~~Ga~g 252 (564)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcEEcCCCc
Q 041372 253 MILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADIIRSPVA 332 (564)
Q Consensus 253 ~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI~aPg~~ 332 (564)
.+.++.||++||. |||.|||..
T Consensus 182 -------------------------------------------------------~~~~~~~S~~G~~---~di~ApG~~ 203 (284)
T 1sh7_A 182 -------------------------------------------------------SDSRSSFSNWGSC---VDLFAPGSQ 203 (284)
T ss_dssp -------------------------------------------------------TSBBCTTCCBSTT---CCEEEECSS
T ss_pred -------------------------------------------------------CCCcCcccCCCCc---cEEEeccCC
Confidence 1234789999995 599999999
Q ss_pred ccccccCCcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccc
Q 041372 333 IEATAEQSVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLN 387 (564)
Q Consensus 333 i~s~~~~~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~ 387 (564)
|.++...+ .|..++|||||||||||++|||+|++|+|++.|||++|++||.+..
T Consensus 204 i~s~~~~~-~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 204 IKSAWYDG-GYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp EEEECTTS-SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred eEEecCCC-CEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 99887654 8999999999999999999999999999999999999999998654
No 27
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=9.5e-38 Score=337.35 Aligned_cols=235 Identities=16% Similarity=0.139 Sum_probs=172.2
Q ss_pred CCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCCCCHHHHHHHHHHHHH-cCCcEEEEccC
Q 041372 18 SARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNLCYDADILSALDDAIN-DVVDILSLSFG 96 (564)
Q Consensus 18 sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~~~~~di~~Ai~~Ai~-dgvdVIn~SlG 96 (564)
.+.|..||||||||||+|...++. | +.||||+|+|+.+|++. +..+++++|++++++ +++||||||||
T Consensus 80 ~~~d~~gHGT~vAGiiaa~~~n~~---g-----~~GvAp~a~i~~~rv~~---g~~~~~~~ai~~a~~~~~~~Vin~S~G 148 (471)
T 1p8j_A 80 TQMNDNRHGTRCAGEVAAVANNGV---C-----GVGVAYNARIGGVRMLD---GEVTDAVEARSLGLNPNHIHIYSASWG 148 (471)
T ss_dssp CTTCTTCHHHHHHHHHHCCSSSSS---S-----CCCTTTTSEEEEEECSS---SCCCHHHHHHHHTSCTTTCCEEEECCB
T ss_pred CCCCCCCcHHHHHHHHHeeccCCC---C-----CEEECCCCeEEEEEccC---CchhHHHHHHHhhhccCCCeEEEeccC
Confidence 356899999999999999764432 2 37999999999999985 345689999999999 99999999999
Q ss_pred CCCCCCCC--ccchhhHHHHHHHh-----CCcEEEEccCCCCCCC-----CccccCCceEEeeeeccCCceeeEEEecCC
Q 041372 97 PSPPQPIY--FEDSTSIGTFHAFQ-----KGILVSASAGNSIFPG-----TATNVAPGILTVAASSVDRKSYSNIYLGNS 164 (564)
Q Consensus 97 ~~~~~~~~--~~~~~~~~~~~a~~-----~Gv~vV~AAGN~g~~~-----~~~~~ap~vitVga~~~~~~~~~~~~lg~~ 164 (564)
........ ....+..++.++.+ +|++||+||||+|... .....+|++|+|||++.
T Consensus 149 ~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~------------- 215 (471)
T 1p8j_A 149 PEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQ------------- 215 (471)
T ss_dssp SCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECT-------------
T ss_pred cCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccC-------------
Confidence 75421111 12234445555543 6999999999998321 11234577788776531
Q ss_pred eEEeceecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHH
Q 041372 165 KILKGSSLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIF 244 (564)
Q Consensus 165 ~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~ 244 (564)
T Consensus 216 -------------------------------------------------------------------------------- 215 (471)
T 1p8j_A 216 -------------------------------------------------------------------------------- 215 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCceEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCC---
Q 041372 245 VRESGGVGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNI--- 321 (564)
Q Consensus 245 ~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~--- 321 (564)
.+.++.||++||..
T Consensus 216 ---------------------------------------------------------------~g~~a~~S~~g~~~~~~ 232 (471)
T 1p8j_A 216 ---------------------------------------------------------------FGNVPWYSEACSSTLAT 232 (471)
T ss_dssp ---------------------------------------------------------------TSCCCTTCCBCTTCCEE
T ss_pred ---------------------------------------------------------------CCCcccccCCCCcceEE
Confidence 12346788888865
Q ss_pred CCCcEEcCCCcccccccCCcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCcccccCCCCCCC
Q 041372 322 ITADIIRSPVAIEATAEQSVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLNNNQQQIRRDPNGSQ 401 (564)
Q Consensus 322 ~kPdI~aPg~~i~s~~~~~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~~~~~~i~~~~~~~~ 401 (564)
.+|...+||..|+++...+..|..++|||||||||||++|||+|++|+|++.+||.+|+.||++++...........+ .
T Consensus 233 ~~~~~~~~g~~i~st~~~~~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~~g-~ 311 (471)
T 1p8j_A 233 TYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVG-R 311 (471)
T ss_dssp EECCCSTTSCCEEEEETTTEEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECTTS-C
T ss_pred eCCCCCCCCCCEEEeeCCCCccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceecCCC-c
Confidence 234444556678887766667999999999999999999999999999999999999999999876432111111111 1
Q ss_pred CCCCCCCCCCccccccCCC
Q 041372 402 TTPFDNGSGHINQVAAMNP 420 (564)
Q Consensus 402 ~~~~~~GaG~Vn~~~A~~p 420 (564)
.....||+|+||+.+|++.
T Consensus 312 ~~~~~~G~G~vda~~Av~~ 330 (471)
T 1p8j_A 312 KVSHSYGYGLLDAGAMVAL 330 (471)
T ss_dssp EEBTTTBTCBCCHHHHHHH
T ss_pred ccCCCCCCEEEcHhHHHHH
Confidence 1346899999999999974
No 28
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=5.3e-37 Score=309.25 Aligned_cols=191 Identities=27% Similarity=0.347 Sum_probs=160.7
Q ss_pred CCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHH--cCCcEEEEc
Q 041372 18 SARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSALDDAIN--DVVDILSLS 94 (564)
Q Consensus 18 sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai~~Ai~--dgvdVIn~S 94 (564)
+|.|..||||||||||+|.. .||||+|+|+.+|++.+.+ +..+++++||+|+++ .|++|||||
T Consensus 65 ~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~Vin~S 130 (278)
T 2b6n_A 65 DATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGPAVANMS 130 (278)
T ss_dssp CCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEEC
T ss_pred CCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCCeEEEEC
Confidence 57899999999999999863 5999999999999987654 567889999999997 599999999
Q ss_pred cCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCCCC--CccccCCceEEeeeeccCCceeeEEEecCCeEEeceec
Q 041372 95 FGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIFPG--TATNVAPGILTVAASSVDRKSYSNIYLGNSKILKGSSL 172 (564)
Q Consensus 95 lG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~~~--~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~g~~~ 172 (564)
||... ...+..++.++.++|++||+||||+|... ..+...|++|+||+.+.
T Consensus 131 ~G~~~------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------------------- 183 (278)
T 2b6n_A 131 LGGGA------SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS--------------------- 183 (278)
T ss_dssp CCEEC------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT---------------------
T ss_pred CCCCc------CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC---------------------
Confidence 99743 35677788889999999999999998422 23556777888876421
Q ss_pred CCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHhcCceE
Q 041372 173 NPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRESGGVG 252 (564)
Q Consensus 173 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~~Ga~g 252 (564)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcEEcCCCc
Q 041372 253 MILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADIIRSPVA 332 (564)
Q Consensus 253 ~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI~aPg~~ 332 (564)
.+.++.||++|| +|||.|||..
T Consensus 184 -------------------------------------------------------~~~~~~~S~~G~---~~di~ApG~~ 205 (278)
T 2b6n_A 184 -------------------------------------------------------NDSRSSFSNYGT---CLDIYAPGSS 205 (278)
T ss_dssp -------------------------------------------------------TSBBCTTCCBST---TCCEEEECSS
T ss_pred -------------------------------------------------------CCCcCCcCCCCC---CCeEEeCCCC
Confidence 123477999998 5799999999
Q ss_pred ccccccC-CcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccc
Q 041372 333 IEATAEQ-SVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLN 387 (564)
Q Consensus 333 i~s~~~~-~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~ 387 (564)
+.++... ...|..++|||||||||||++|||+|++|+|++.|||.+|++||.+..
T Consensus 206 i~s~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 206 ITSSWYTSNSATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADK 261 (278)
T ss_dssp EEEECTTSTTCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred eECcccCCCCCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC
Confidence 9887653 458999999999999999999999999999999999999999998643
No 29
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=7.4e-37 Score=332.66 Aligned_cols=231 Identities=19% Similarity=0.158 Sum_probs=173.0
Q ss_pred CCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCCCCHHHHHHHHHHHHHcCCcEEEEccCCCC
Q 041372 20 RDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNLCYDADILSALDDAINDVVDILSLSFGPSP 99 (564)
Q Consensus 20 ~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~~~~~di~~Ai~~Ai~dgvdVIn~SlG~~~ 99 (564)
.|.+||||||||||+|...++. | +.||||+|+|+.+|++... +...++++||++|++++ ||||||||...
T Consensus 95 ~d~~gHGT~vAGiiaa~~~n~~---~-----~~GvAp~a~i~~~rv~~~~-~~~~~~~~ai~~a~~~~-~Iin~S~G~~~ 164 (503)
T 2id4_A 95 LSDDYHGTRCAGEIAAKKGNNF---C-----GVGVGYNAKISGIRILSGD-ITTEDEAASLIYGLDVN-DIYSCSWGPAD 164 (503)
T ss_dssp STTTTHHHHHHHHHHCCSSSSS---S-----CCCTTTTSEEEEEECTTSC-CCHHHHHHHTTTTTTTC-SEEEECEESCC
T ss_pred CCCCChHHHHHHHHHhccCCCC---C-----cEEECCCCEEEEEEeeCCC-CChHHHHHHHHhHhhcC-CEEEeCCCcCC
Confidence 5889999999999999864432 2 2799999999999998643 67888999999999998 99999999764
Q ss_pred CCCCC--ccchhhHHHHHHH-----hCCcEEEEccCCCCCCC---Cc--cccCCceEEeeeeccCCceeeEEEecCCeEE
Q 041372 100 PQPIY--FEDSTSIGTFHAF-----QKGILVSASAGNSIFPG---TA--TNVAPGILTVAASSVDRKSYSNIYLGNSKIL 167 (564)
Q Consensus 100 ~~~~~--~~~~~~~~~~~a~-----~~Gv~vV~AAGN~g~~~---~~--~~~ap~vitVga~~~~~~~~~~~~lg~~~~~ 167 (564)
..... ....+..++.++. .+|++||+||||+|... .. ...+|++|+|||++.
T Consensus 165 ~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~---------------- 228 (503)
T 2id4_A 165 DGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDH---------------- 228 (503)
T ss_dssp SSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECT----------------
T ss_pred CCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCC----------------
Confidence 22111 1234555666665 37999999999998321 11 124566777776431
Q ss_pred eceecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHh
Q 041372 168 KGSSLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRE 247 (564)
Q Consensus 168 ~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~ 247 (564)
T Consensus 229 -------------------------------------------------------------------------------- 228 (503)
T 2id4_A 229 -------------------------------------------------------------------------------- 228 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcEE
Q 041372 248 SGGVGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADII 327 (564)
Q Consensus 248 ~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI~ 327 (564)
.+.++.||++||.. ++.
T Consensus 229 ------------------------------------------------------------~~~~a~~S~~g~~~---~~~ 245 (503)
T 2id4_A 229 ------------------------------------------------------------KDLHPPYSEGCSAV---MAV 245 (503)
T ss_dssp ------------------------------------------------------------TSCCCTTCCCCTTE---EEE
T ss_pred ------------------------------------------------------------CCCcCCcCCCCCcc---eEe
Confidence 12346789999876 776
Q ss_pred c----CCCcccccccCCcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCC-cccccCCCCCCCC
Q 041372 328 R----SPVAIEATAEQSVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLNNN-QQQIRRDPNGSQT 402 (564)
Q Consensus 328 a----Pg~~i~s~~~~~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~~~-~~~i~~~~~~~~~ 402 (564)
+ ||..|+++...+..|..++|||||||||||++|||+|++|+|++.+||.+|+.||.+++.. .........+ ..
T Consensus 246 a~~~gpG~~I~st~~~~~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~~g-~~ 324 (503)
T 2id4_A 246 TYSSGSGEYIHSSDINGRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSAMG-KK 324 (503)
T ss_dssp EECSBTTBCEEEECSTTCEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECSSS-SE
T ss_pred ecCCCCCCceEeecCCCCceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecCCC-Cc
Confidence 6 8888988855456899999999999999999999999999999999999999999987643 1110000111 11
Q ss_pred CCCCCCCCCccccccCCC
Q 041372 403 TPFDNGSGHINQVAAMNP 420 (564)
Q Consensus 403 ~~~~~GaG~Vn~~~A~~p 420 (564)
....||+|+||+.+|++.
T Consensus 325 ~~~~~G~G~vda~~Av~~ 342 (503)
T 2id4_A 325 YSHRYGFGKIDAHKLIEM 342 (503)
T ss_dssp EBTTTBTCBCCHHHHHHH
T ss_pred cCcccCCcEecHHHHHHH
Confidence 245799999999999974
No 30
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=7.9e-37 Score=328.40 Aligned_cols=227 Identities=18% Similarity=0.181 Sum_probs=173.0
Q ss_pred CCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHHc------CCcE
Q 041372 18 SARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSALDDAIND------VVDI 90 (564)
Q Consensus 18 sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai~~Ai~d------gvdV 90 (564)
.+.|..||||||||||+|+. .||||+|+|+.+|++...+ +..+++++||+|++++ +++|
T Consensus 67 ~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~V 132 (546)
T 2qtw_B 67 QASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLV 132 (546)
T ss_dssp -CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEE
T ss_pred CCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeE
Confidence 46789999999999999874 5899999999999987654 5678899999999984 9999
Q ss_pred EEEccCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCCCC--CccccCCceEEeeeeccCCceeeEEEecCCeEEe
Q 041372 91 LSLSFGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIFPG--TATNVAPGILTVAASSVDRKSYSNIYLGNSKILK 168 (564)
Q Consensus 91 In~SlG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~~~--~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~ 168 (564)
||||||+. ....+..++.++.++|++||+||||+|... ..+...|++|+|||++.+...
T Consensus 133 INmSlGg~------~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~------------- 193 (546)
T 2qtw_B 133 VLLPLAGG------YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP------------- 193 (546)
T ss_dssp EEECEEEE------CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB-------------
T ss_pred EEecCCCC------CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc-------------
Confidence 99999964 235677888899999999999999998432 346678999999986421100
Q ss_pred ceecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHhc
Q 041372 169 GSSLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRES 248 (564)
Q Consensus 169 g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~~ 248 (564)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcEEc
Q 041372 249 GGVGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADIIR 328 (564)
Q Consensus 249 Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI~a 328 (564)
...-..||++|| +|||.|
T Consensus 194 -----------------------------------------------------------a~~s~~fSn~G~---~vDI~A 211 (546)
T 2qtw_B 194 -----------------------------------------------------------VTLGTLGTNFGR---CVDLFA 211 (546)
T ss_dssp -----------------------------------------------------------CEETTEECCBST---TCCEEE
T ss_pred -----------------------------------------------------------ccccCCcCCCCC---cceEEe
Confidence 000023899998 679999
Q ss_pred CCCcccccccC-CcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccccCCccccc-------CC-CCC
Q 041372 329 SPVAIEATAEQ-SVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLNNNQQQIR-------RD-PNG 399 (564)
Q Consensus 329 Pg~~i~s~~~~-~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~~~~~~i~-------~~-~~~ 399 (564)
||.+|+++... ...|..++|||||||||||++|||+|++|+|+|.|||.+|+.||.+..-....+. .+ -..
T Consensus 212 PG~~I~St~~~~~~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~~~~~p~~~~~~tpN~l~~ 291 (546)
T 2qtw_B 212 PGEDIIGASSDCSTCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTPNLVAA 291 (546)
T ss_dssp ECSSEEEECTTSTTCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSCGGGSCHHHHTTSCCEECC
T ss_pred cCccEEeeccCCCCcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCccCccccCCCCccchhc
Confidence 99999998775 3579999999999999999999999999999999999999999975332111000 00 001
Q ss_pred CCCCCCCCCCCC--ccccccCC
Q 041372 400 SQTTPFDNGSGH--INQVAAMN 419 (564)
Q Consensus 400 ~~~~~~~~GaG~--Vn~~~A~~ 419 (564)
.....+.+|+|+ .+.+++..
T Consensus 292 ~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 292 LPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp CCCTTCC--CCCEEEEEECCCC
T ss_pred cCCcccccCCCcchhchhccCC
Confidence 122456678888 77776664
No 31
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=1.8e-36 Score=305.16 Aligned_cols=192 Identities=26% Similarity=0.354 Sum_probs=162.0
Q ss_pred CCCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHHc--CCcEEEE
Q 041372 17 RSARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSALDDAIND--VVDILSL 93 (564)
Q Consensus 17 ~sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai~~Ai~d--gvdVIn~ 93 (564)
..+.|..||||||||||+|.. .||||+|+|+.+|++...+ +..+++++|++++++. +++||||
T Consensus 62 ~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~vin~ 127 (276)
T 4dzt_A 62 GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRRPAVANM 127 (276)
T ss_dssp SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCCCeEEEE
Confidence 467789999999999999873 5999999999999987654 6688899999999987 9999999
Q ss_pred ccCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCCCC--CccccCCceEEeeeeccCCceeeEEEecCCeEEecee
Q 041372 94 SFGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIFPG--TATNVAPGILTVAASSVDRKSYSNIYLGNSKILKGSS 171 (564)
Q Consensus 94 SlG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~~~--~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~~g~~ 171 (564)
|||... ...+..++.++.++|+++|+||||+|... ..+...|.+|+||+.+.
T Consensus 128 S~g~~~------~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~-------------------- 181 (276)
T 4dzt_A 128 SLGGGV------STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS-------------------- 181 (276)
T ss_dssp CCCEEC------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT--------------------
T ss_pred CCCCCC------CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC--------------------
Confidence 999642 36677888899999999999999998422 23556677777776421
Q ss_pred cCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHhcCce
Q 041372 172 LNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRESGGV 251 (564)
Q Consensus 172 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~~Ga~ 251 (564)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcEEcCCC
Q 041372 252 GMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADIIRSPV 331 (564)
Q Consensus 252 g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI~aPg~ 331 (564)
.+.++.||++||. +||.|||.
T Consensus 182 --------------------------------------------------------~~~~~~~S~~g~~---~dv~ApG~ 202 (276)
T 4dzt_A 182 --------------------------------------------------------SDARASFSNYGSC---VDLFAPGA 202 (276)
T ss_dssp --------------------------------------------------------TSBBCTTCCBSTT---CCEEEECS
T ss_pred --------------------------------------------------------CCCcCCcCCCCCC---ceEEeCCC
Confidence 1234789999995 49999999
Q ss_pred cccccccC-CcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccc
Q 041372 332 AIEATAEQ-SVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLN 387 (564)
Q Consensus 332 ~i~s~~~~-~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~ 387 (564)
.|.++... ...|..++|||||||||||++|||+|++|++++++||.+|++||++..
T Consensus 203 ~i~s~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 259 (276)
T 4dzt_A 203 SIPSAWYTSDTATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGR 259 (276)
T ss_dssp SEEEECTTSSSCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred CeEccccCCCCceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCc
Confidence 99987654 347999999999999999999999999999999999999999999764
No 32
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=350.02 Aligned_cols=195 Identities=20% Similarity=0.206 Sum_probs=0.0
Q ss_pred CCCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHHc------CCc
Q 041372 17 RSARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSALDDAIND------VVD 89 (564)
Q Consensus 17 ~sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai~~Ai~d------gvd 89 (564)
.++.|.+||||||||||+|+. .||||+|+|+.||+++..+ ++.+++++||+|++++ |++
T Consensus 218 ~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~G~g~~s~ii~aI~~a~~~~~~~~~g~~ 283 (692)
T 2p4e_P 218 RQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPL 283 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCCCCCCHHHHHHHHHHHHhhhhcccCCce
Confidence 357899999999999999873 5999999999999998654 5678899999999986 899
Q ss_pred EEEEccCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCCC--CCccccCCceEEeeeeccCCceeeEEEecCCeEE
Q 041372 90 ILSLSFGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIFP--GTATNVAPGILTVAASSVDRKSYSNIYLGNSKIL 167 (564)
Q Consensus 90 VIn~SlG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~~--~~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~ 167 (564)
|||||||+.. ...+..++.+|.++||+||+||||+|.. ...++.+|++|+|||++.+...
T Consensus 284 VINmSlGg~~------s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~------------ 345 (692)
T 2p4e_P 284 VVLLPLAGGY------SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP------------ 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEecCCCCC------cHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCc------------
Confidence 9999999642 2456667788999999999999999843 2346678899999986421100
Q ss_pred eceecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHh
Q 041372 168 KGSSLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRE 247 (564)
Q Consensus 168 ~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~ 247 (564)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcEE
Q 041372 248 SGGVGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADII 327 (564)
Q Consensus 248 ~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI~ 327 (564)
...-..||++|| +|||.
T Consensus 346 ------------------------------------------------------------a~~ss~fSn~G~---~vDI~ 362 (692)
T 2p4e_P 346 ------------------------------------------------------------VTLGTLGTNFGR---CVDLF 362 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------------cccccccCCCCC---ceeEE
Confidence 000023899998 78999
Q ss_pred cCCCcccccccC-CcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccc
Q 041372 328 RSPVAIEATAEQ-SVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVL 386 (564)
Q Consensus 328 aPg~~i~s~~~~-~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~ 386 (564)
|||.+|+++... ...|..+||||||||||||++|||+|++|+|+|+|||++|++||.+.
T Consensus 363 APG~~I~St~~~~~~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~ 422 (692)
T 2p4e_P 363 APGEDIIGASSDCSTCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 422 (692)
T ss_dssp ------------------------------------------------------------
T ss_pred ecCCcEEeeccCCCCceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 999999998875 35799999999999999999999999999999999999999999753
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=5e-36 Score=302.49 Aligned_cols=189 Identities=28% Similarity=0.315 Sum_probs=159.9
Q ss_pred CCCCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHHHHHHHcC-------Cc
Q 041372 18 SARDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSALDDAINDV-------VD 89 (564)
Q Consensus 18 sp~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai~~Ai~dg-------vd 89 (564)
.+.|..||||||||||+|+. .||||+|+|+.+|++...+ +..+++++|++++++++ ++
T Consensus 63 ~~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~ 128 (279)
T 3f7m_A 63 TARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRT 128 (279)
T ss_dssp SSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEE
T ss_pred CCCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCe
Confidence 34589999999999999863 5999999999999987653 67889999999999987 89
Q ss_pred EEEEccCCCCCCCCCccchhhHHHHHHHhCCcEEEEccCCCCCC--CCccccCCceEEeeeeccCCceeeEEEecCCeEE
Q 041372 90 ILSLSFGPSPPQPIYFEDSTSIGTFHAFQKGILVSASAGNSIFP--GTATNVAPGILTVAASSVDRKSYSNIYLGNSKIL 167 (564)
Q Consensus 90 VIn~SlG~~~~~~~~~~~~~~~~~~~a~~~Gv~vV~AAGN~g~~--~~~~~~ap~vitVga~~~~~~~~~~~~lg~~~~~ 167 (564)
|||||||.. ..+.+..++.++.++|++||+||||+|.. ...+...|++|+||+.+.
T Consensus 129 Vin~S~g~~------~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------------- 186 (279)
T 3f7m_A 129 VASMSLGGG------YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDS---------------- 186 (279)
T ss_dssp EEEECCCEE------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----------------
T ss_pred EEEeCCCcC------ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCC----------------
Confidence 999999964 34677888899999999999999999842 223566778888887421
Q ss_pred eceecCCCCCCceeEEEEcchhhHHhhhhhcCcccccccccCCCCCCCCCcCCCcCceEEEEEecCCCchhHHHHHHHHh
Q 041372 168 KGSSLNPLETKTFYGLIAGSTAAAQLQQQMQGSVSGYSTLSGFCKNNTLDHHTLIKGKIVVCTIEASTDNRREKCIFVRE 247 (564)
Q Consensus 168 ~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gkIv~~~~~~~~~~~~~~~~~~~~ 247 (564)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 3f7m_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceEEEEEcCCCCCCCcceecceEEECHHhHHHHHHHHhcCCCcEEEEccCeeeecccCCCcccccccCCCCCCCCcEE
Q 041372 248 SGGVGMILIDPNAKDIGFQFVIPATLIGQEEAQELQAYMTAGKNPIARIYPPQTILKTKPAPEMAAFSSMGPNIITADII 327 (564)
Q Consensus 248 ~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~va~FSS~GP~~~kPdI~ 327 (564)
.+.++.||++|| ++||.
T Consensus 187 ------------------------------------------------------------~~~~~~~S~~g~---~~di~ 203 (279)
T 3f7m_A 187 ------------------------------------------------------------NDVRSTFSNYGR---VVDIF 203 (279)
T ss_dssp ------------------------------------------------------------TSBBCTTCCBST---TCCEE
T ss_pred ------------------------------------------------------------CCCCCCCCCCCC---CCeEE
Confidence 123478999999 46999
Q ss_pred cCCCcccccccCCcceEEEeccccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccc
Q 041372 328 RSPVAIEATAEQSVDYNIISGTSMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLN 387 (564)
Q Consensus 328 aPg~~i~s~~~~~~~y~~~SGTSMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~ 387 (564)
|||..|.++... ..|..++|||||||||||++|||+|++|+ ++.+||.+|+.||.+..
T Consensus 204 ApG~~i~s~~~~-~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 204 APGTSITSTWIG-GRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp EECSSEEEECGG-GCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESC
T ss_pred ECCCCeEeecCC-CCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccc
Confidence 999999988775 47999999999999999999999999999 99999999999998643
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=2.8e-34 Score=319.81 Aligned_cols=117 Identities=23% Similarity=0.209 Sum_probs=80.2
Q ss_pred CCCCcCCCCCCCCC-CCCCCChhhHHHhhcccccCCcccccccCcceeeecCCCeEEEEEEecCCC-CCHHHHHHHH-HH
Q 041372 6 GSLESINSISFRSA-RDSDGHGTHTASTIAGAVVENVSLFGMARGTARGGAPSARLAIYKACWFNL-CYDADILSAL-DD 82 (564)
Q Consensus 6 ~~~~~~~~~~~~sp-~D~~GHGTHvAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~ykv~~~~~-~~~~di~~Ai-~~ 82 (564)
|..++.+..+...| .|++||||||||||||.. ++ .| +.||||+|+|+.||+|++.+ +..++++.|+ ++
T Consensus 95 ~~~~~~~~~~dp~p~~~~~gHGThVAGiIAa~~-n~---~g-----~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~ 165 (600)
T 3hjr_A 95 GSKNVVTGSDDPTPTDPDTAHGTSVSGIIAAVD-NA---IG-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDS 165 (600)
T ss_dssp CCBCTTTSSSCCCCCSTTCCHHHHHHHHHHCCS-SS---SS-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSS
T ss_pred CcceeecCCCCCCCCCCCCChHHHHHHHHhEeC-CC---CC-----cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhh
Confidence 44555443333344 467899999999999864 22 22 27999999999999997654 5567777665 67
Q ss_pred HHHcCCcEEEEccCCCCCCCCCccch----hhHHHHH--HHhCCcEEEEccCCCC
Q 041372 83 AINDVVDILSLSFGPSPPQPIYFEDS----TSIGTFH--AFQKGILVSASAGNSI 131 (564)
Q Consensus 83 Ai~dgvdVIn~SlG~~~~~~~~~~~~----~~~~~~~--a~~~Gv~vV~AAGN~g 131 (564)
+..++++|||+|||.....+...... +..++.. ...+|+++|+||||.+
T Consensus 166 ~~~~~~~I~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~ 220 (600)
T 3hjr_A 166 NASRDNRVFNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGF 220 (600)
T ss_dssp HHHHTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCS
T ss_pred hhhcCCCEEecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCcc
Confidence 88899999999999764332222222 1222222 2358999999999976
No 35
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.83 E-value=4.5e-21 Score=199.72 Aligned_cols=99 Identities=12% Similarity=0.151 Sum_probs=78.3
Q ss_pred eecCCCeEEEEEEecCCCCCHHHHHHHHHHHHH-cCCcEEEEccCCCCCC--CCCccchhhHHHHHHHhCCcEEEEccCC
Q 041372 53 GGAPSARLAIYKACWFNLCYDADILSALDDAIN-DVVDILSLSFGPSPPQ--PIYFEDSTSIGTFHAFQKGILVSASAGN 129 (564)
Q Consensus 53 GvAP~A~l~~ykv~~~~~~~~~di~~Ai~~Ai~-dgvdVIn~SlG~~~~~--~~~~~~~~~~~~~~a~~~Gv~vV~AAGN 129 (564)
.+||+|+++.|++.....+..++++++|++|++ ++++|||||||..... .....+.+..++.+|..+||.||+||||
T Consensus 91 ~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsGd 170 (372)
T 1ga6_A 91 SAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSGD 170 (372)
T ss_dssp HTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred hcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEECC
Confidence 478999999999976555778899999999998 8999999999974310 0112345667777888999999999999
Q ss_pred CCCCC--------------CccccCCceEEeeeecc
Q 041372 130 SIFPG--------------TATNVAPGILTVAASSV 151 (564)
Q Consensus 130 ~g~~~--------------~~~~~ap~vitVga~~~ 151 (564)
+|... ..+..+|||++||+++.
T Consensus 171 ~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~ 206 (372)
T 1ga6_A 171 EGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 206 (372)
T ss_dssp BTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred CCCccccccCccCCccCCcCCCCCCCCeEEEEeeec
Confidence 98321 34578999999999864
No 36
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.81 E-value=1.5e-20 Score=205.27 Aligned_cols=97 Identities=26% Similarity=0.284 Sum_probs=76.1
Q ss_pred eeeecCCCeEEEEEEecCCCCCHHHHHHHHHHHHH---cCCcEEEEccCCCCCC-CCCccchhhHHHHHHHhCCcEEEEc
Q 041372 51 ARGGAPSARLAIYKACWFNLCYDADILSALDDAIN---DVVDILSLSFGPSPPQ-PIYFEDSTSIGTFHAFQKGILVSAS 126 (564)
Q Consensus 51 ~~GvAP~A~l~~ykv~~~~~~~~~di~~Ai~~Ai~---dgvdVIn~SlG~~~~~-~~~~~~~~~~~~~~a~~~Gv~vV~A 126 (564)
+.||||+|+|+.||+. ...++++++|++|++ ++++|||+|||..... +......+..++.+|..+||+||+|
T Consensus 274 ~~gvAp~a~i~~~~~~----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv~A 349 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAP----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAA 349 (552)
T ss_dssp HHHHCTTSEEEEEECC----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhccCCCCeEEEEEcC----CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 4799999999999973 356789999999998 7999999999975321 0011235666777888999999999
Q ss_pred cCCCCCC---------CCccccCCceEEeeeecc
Q 041372 127 AGNSIFP---------GTATNVAPGILTVAASSV 151 (564)
Q Consensus 127 AGN~g~~---------~~~~~~ap~vitVga~~~ 151 (564)
|||+|.. -..+..+|||++||+++.
T Consensus 350 sGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 350 AGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp CCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred cCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 9999832 235578999999999864
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.68 E-value=3.1e-08 Score=107.45 Aligned_cols=98 Identities=14% Similarity=0.119 Sum_probs=59.5
Q ss_pred eecCCCeEEEEEEecCCCCCHHHHHHHHHHHH--HcCCcEEEEccCCCCCC-CCCccchhhHHHHHHHhCCcEEEEccCC
Q 041372 53 GGAPSARLAIYKACWFNLCYDADILSALDDAI--NDVVDILSLSFGPSPPQ-PIYFEDSTSIGTFHAFQKGILVSASAGN 129 (564)
Q Consensus 53 GvAP~A~l~~ykv~~~~~~~~~di~~Ai~~Ai--~dgvdVIn~SlG~~~~~-~~~~~~~~~~~~~~a~~~Gv~vV~AAGN 129 (564)
++++...++.|-.-. .....+..+..+++.. .+-.+|||+|||..... +..+.+.+...+.++..+||.|++|+||
T Consensus 263 a~~~~i~~~~~~~~g-~~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD 341 (544)
T 3edy_A 263 SAGANISTWVYSSPG-RHEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGD 341 (544)
T ss_dssp HHSTTSEEEEECCCS-CCTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred ccCCCceEEEEecCC-cccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecCC
Confidence 344445555554311 1112233444444332 34678999999975321 1112234455566788899999999999
Q ss_pred CCCC-----------CCccccCCceEEeeeecc
Q 041372 130 SIFP-----------GTATNVAPGILTVAASSV 151 (564)
Q Consensus 130 ~g~~-----------~~~~~~ap~vitVga~~~ 151 (564)
+|.. -..+..+|||++||+++.
T Consensus 342 ~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 342 SGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp STTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 9832 135678999999999864
No 38
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.08 E-value=2.4e-05 Score=72.97 Aligned_cols=91 Identities=15% Similarity=0.116 Sum_probs=70.6
Q ss_pred ccCCCCCCCCCcC-C-----CcCceEEEEEecCCC-chhHHHHHHHHhcCceEEEEEcCCC-CC--C----CcceecceE
Q 041372 207 LSGFCKNNTLDHH-T-----LIKGKIVVCTIEAST-DNRREKCIFVRESGGVGMILIDPNA-KD--I----GFQFVIPAT 272 (564)
Q Consensus 207 ~~~~c~~~~~~~~-~-----~~~gkIv~~~~~~~~-~~~~~~~~~~~~~Ga~g~i~~~~~~-~~--~----~~~~~~p~~ 272 (564)
....|.+...... . ..++||+|+.| +. |.+.+|..+++++||.++|++|+.. .. . .....+|++
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~R--G~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv 159 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQR--GGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAI 159 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEES--CTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEEC--CCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEE
Confidence 3568988654321 1 24789999986 67 9999999999999999999999742 11 1 112469999
Q ss_pred EECHHhHHHHHHHHhcCCCcEEEEccC
Q 041372 273 LIGQEEAQELQAYMTAGKNPIARIYPP 299 (564)
Q Consensus 273 ~i~~~~g~~l~~~~~~~~~~~~~i~~~ 299 (564)
+|+..+|+.|++.+..+...+.+|...
T Consensus 160 ~Is~~~G~~L~~~L~~G~~Vtvti~vg 186 (194)
T 3icu_A 160 MIGNLKGTKILQSIQRGIQVTMVIEVG 186 (194)
T ss_dssp EECHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred EECHHHHHHHHHHHHCCCeEEEEEECC
Confidence 999999999999999998877777543
No 39
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=93.90 E-value=0.13 Score=53.90 Aligned_cols=66 Identities=17% Similarity=0.192 Sum_probs=54.4
Q ss_pred CCcCceEEEEEecCCCchhHHHHHHHHhcCceEEEEEcCCCCCCC------cceecceEEECHHhHHHHHHHHh
Q 041372 220 TLIKGKIVVCTIEASTDNRREKCIFVRESGGVGMILIDPNAKDIG------FQFVIPATLIGQEEAQELQAYMT 287 (564)
Q Consensus 220 ~~~~gkIv~~~~~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~------~~~~~p~~~i~~~~g~~l~~~~~ 287 (564)
.+++||||++.+ +.|.+.+|..+++++||.|+|++++...... ....+|...++.++++.|..++.
T Consensus 111 ~dv~GkIvlv~~--g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 111 KDLNGKIALIQR--GNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp SCCTTSEEEEEC--CSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred CCcCceEEEEeC--CCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 479999999986 5688999999999999999999987532211 23468999999999999999984
No 40
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.65 E-value=0.28 Score=41.70 Aligned_cols=74 Identities=22% Similarity=0.170 Sum_probs=52.5
Q ss_pred CCcEEEEEEEEEccCCCeEEEEEEeCCCCcEEEEEeCEEEEeeCCcEEEEEEEEEecccCCCceEEEEEEEE-CCceEEE
Q 041372 476 NGSLSIHRTVTYYGEGPTVYVGHVNNPTGVNVSVSSAELKFTKTGEKMSFRVDFMPFKKIGGSFVFGDLTWS-NGIHRVR 554 (564)
Q Consensus 476 ~~~~~~~rtvtnvg~~~~ty~~~v~~p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~G~l~w~-~~~h~vr 554 (564)
+.+.+.+..++|+|+.+..|+.....| .+++|....+ ++||++.++|+|.+.... ...+.|... ++...+.
T Consensus 40 ~~~~~~~~~l~N~g~~~~~f~~~~~~~----F~i~P~~g~L-~pg~~~~i~V~F~P~~~g---~~~~~l~v~~~~g~~~~ 111 (122)
T 2ys4_A 40 KYSTQKILLVRNIGNKNAVFHIKTCRP----FSIEPAIGTL-NVGESMQLEVEFEPQSVG---DHSGRLIVCYDTGEKVF 111 (122)
T ss_dssp SSCEEEEEEEECCSSSCEEEEEECCTT----EEEESSEEEE-CTTCEEEEEEEECCSSSB---CCCCBCEEEESSSCEEC
T ss_pred CCeEEEEEEEEECCCCCEEEEEecCCC----eEEECCcCEE-CCCCEEEEEEEEEcCCCc---cEEEEEEEEECCCCEEE
Confidence 345677888999999888888776543 7889999999 699999999999986432 223444433 4444444
Q ss_pred ceE
Q 041372 555 SPI 557 (564)
Q Consensus 555 ~Pi 557 (564)
.++
T Consensus 112 v~L 114 (122)
T 2ys4_A 112 VSL 114 (122)
T ss_dssp CEE
T ss_pred EEE
Confidence 443
No 41
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=92.37 E-value=0.47 Score=49.95 Aligned_cols=76 Identities=20% Similarity=0.290 Sum_probs=54.6
Q ss_pred CCcCceEEEEEecCCCch---------hHHH----HHHHHhcCceEEEEEcCCCCC--------CC---cceecceEEEC
Q 041372 220 TLIKGKIVVCTIEASTDN---------RREK----CIFVRESGGVGMILIDPNAKD--------IG---FQFVIPATLIG 275 (564)
Q Consensus 220 ~~~~gkIv~~~~~~~~~~---------~~~~----~~~~~~~Ga~g~i~~~~~~~~--------~~---~~~~~p~~~i~ 275 (564)
.+++|||||+.++ .|. +..| ...+.++||+|+|+++..... .. ....+|++.|+
T Consensus 125 ~dvkGKIVlv~~~--~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is 202 (444)
T 3iib_A 125 GSLNDKIAFIDAK--TERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAIS 202 (444)
T ss_dssp TTTTTCEEEECCC--CCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEEC
T ss_pred cccCccEEEEeCC--CCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEec
Confidence 5899999999763 331 2233 456889999999999864321 11 12468999999
Q ss_pred HHhHHHHHHHHhcCCCcEEEEc
Q 041372 276 QEEAQELQAYMTAGKNPIARIY 297 (564)
Q Consensus 276 ~~~g~~l~~~~~~~~~~~~~i~ 297 (564)
.++++.|...+..+....+++.
T Consensus 203 ~~da~~L~~~l~~g~~~~v~l~ 224 (444)
T 3iib_A 203 NPDADLINAMLKRDKEVVISLE 224 (444)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEE
T ss_pred HHHHHHHHHHHhCCCCeEEEEE
Confidence 9999999999987765555543
No 42
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=88.75 E-value=0.74 Score=50.67 Aligned_cols=65 Identities=23% Similarity=0.288 Sum_probs=51.4
Q ss_pred CcCceEEEEEecCCCchhHHHHHHHHhcCceEEEEEcCCCCC----------------------CCc-------------
Q 041372 221 LIKGKIVVCTIEASTDNRREKCIFVRESGGVGMILIDPNAKD----------------------IGF------------- 265 (564)
Q Consensus 221 ~~~gkIv~~~~~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~----------------------~~~------------- 265 (564)
+++|||||+.+ +.|.+.+|..++..+||+|+|++++.... .++
T Consensus 129 dv~GkIvlv~~--g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~ 206 (640)
T 3kas_A 129 PVNGSIVIVRA--GKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRS 206 (640)
T ss_dssp CCTTSEEEEES--CSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSS
T ss_pred ccCCcEEEEec--CCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCcccccccccccccc
Confidence 68999999986 57889999999999999999999865310 000
Q ss_pred --ceecceEEECHHhHHHHHHHHh
Q 041372 266 --QFVIPATLIGQEEAQELQAYMT 287 (564)
Q Consensus 266 --~~~~p~~~i~~~~g~~l~~~~~ 287 (564)
.-.+|+..|+.++++.|+..+.
T Consensus 207 ~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 207 SGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCCSSCEEECCHHHHHHHHTTEE
T ss_pred cCCCCCCEEecCHHHHHHHHHHcc
Confidence 1247999999999999987553
No 43
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=87.49 E-value=1.2 Score=49.61 Aligned_cols=37 Identities=27% Similarity=0.313 Sum_probs=33.5
Q ss_pred CCcCceEEEEEecCCCchhHHHHHHHHhcCceEEEEEcC
Q 041372 220 TLIKGKIVVCTIEASTDNRREKCIFVRESGGVGMILIDP 258 (564)
Q Consensus 220 ~~~~gkIv~~~~~~~~~~~~~~~~~~~~~Ga~g~i~~~~ 258 (564)
.+++|||||+++ +.|.+.+|..+++.+||+|+|++++
T Consensus 151 ~~v~GkIvlv~~--G~~~~~~Kv~~A~~~GA~gviiy~d 187 (707)
T 3fed_A 151 INCTGKIVIARY--GKIFRGNKVKNAMLAGAIGIILYSD 187 (707)
T ss_dssp CCCTTCEEEEEC--CSSCHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCCCeEEEEEC--CCCCHhHHHHHHHHCCCEEEEEEcC
Confidence 569999999987 4588999999999999999999985
No 44
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=79.36 E-value=24 Score=30.44 Aligned_cols=83 Identities=12% Similarity=-0.022 Sum_probs=55.4
Q ss_pred cEEEEEEEEEccCCCeEEEEEEeCC----CCcEEEEEeCEEEEeeCCcEEEEEEEEEeccc------CCCceEEEEEEEE
Q 041372 478 SLSIHRTVTYYGEGPTVYVGHVNNP----TGVNVSVSSAELKFTKTGEKMSFRVDFMPFKK------IGGSFVFGDLTWS 547 (564)
Q Consensus 478 ~~~~~rtvtnvg~~~~ty~~~v~~p----~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~------~~~~~~~G~l~w~ 547 (564)
..+-+-+++|.|.-+..|.+..... ..--.+|+|..=++ .+||+.+++|++...+. ....-..--|.+.
T Consensus 44 ~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL~ 122 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVLH 122 (140)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEEE
T ss_pred eeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEEEE
Confidence 3455677899999999999974321 11236678999999 79999999999975421 0112235567765
Q ss_pred -CCceEEEceEEEEE
Q 041372 548 -NGIHRVRSPIGLNV 561 (564)
Q Consensus 548 -~~~h~vr~Pi~v~~ 561 (564)
.++..-.+||--.+
T Consensus 123 Ve~G~d~fI~v~g~~ 137 (140)
T 3qbt_B 123 LDRGKDYFLTISGNY 137 (140)
T ss_dssp ETTSCEEEEEEEEEE
T ss_pred eecCCcEEEEEeccc
Confidence 55566667766544
No 45
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.77 E-value=4.8 Score=33.00 Aligned_cols=67 Identities=10% Similarity=0.083 Sum_probs=47.9
Q ss_pred CcEEEEEEEEEccCCCeEEEEEEeC-CCCcEEEEEeCEEEEeeCCcEEEEEEEEEecccCCCceEEEEEEEE
Q 041372 477 GSLSIHRTVTYYGEGPTVYVGHVNN-PTGVNVSVSSAELKFTKTGEKMSFRVDFMPFKKIGGSFVFGDLTWS 547 (564)
Q Consensus 477 ~~~~~~rtvtnvg~~~~ty~~~v~~-p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~G~l~w~ 547 (564)
...+.+.+++|.|+.+..|+..... +.+...+++|..=.+ ++|++++++|+|++.. .+.| .=.|+|.
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~--~g~f-~~~i~v~ 93 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSII--LGNF-EEEFLVN 93 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCC--CEEE-EEEECEE
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCC--cceE-EEEEEEE
Confidence 3466778899999999999883211 112347789999999 6999999999998753 2333 3346665
No 46
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=75.23 E-value=0.92 Score=47.58 Aligned_cols=32 Identities=25% Similarity=0.195 Sum_probs=26.1
Q ss_pred ccCCCcccccccCCCCCCCCcEEcCCCcccccccC
Q 041372 305 TKPAPEMAAFSSMGPNIITADIIRSPVAIEATAEQ 339 (564)
Q Consensus 305 ~~~~~~va~FSS~GP~~~kPdI~aPg~~i~s~~~~ 339 (564)
......++.||++|| ++||.|||..|.++...
T Consensus 180 ~~~~~~~~~~S~~g~---~vdv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 180 VDSNLDHAAFSQYTD---QVEISGPGEAILSTVTV 211 (441)
T ss_dssp ECTTCCBCTTSCCCT---TEEEEEECSSEEEECST
T ss_pred ECCCCCCCccccCCC---ceEEEeccCCeeccccC
Confidence 444567899999998 46999999999887653
No 47
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=72.36 E-value=23 Score=32.95 Aligned_cols=66 Identities=11% Similarity=0.019 Sum_probs=45.6
Q ss_pred cEEEEEEEEEccCCCeEEEEEEeCCCCcEEEEEeCEEEEeeCCcEEEEEEEEEecccCCCceEEEEEEEE
Q 041372 478 SLSIHRTVTYYGEGPTVYVGHVNNPTGVNVSVSSAELKFTKTGEKMSFRVDFMPFKKIGGSFVFGDLTWS 547 (564)
Q Consensus 478 ~~~~~rtvtnvg~~~~ty~~~v~~p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~G~l~w~ 547 (564)
..+.+.+++|.|+.+-+++.. ..|..+.+..+|..| ++||+.+++|+++...........+.|+..
T Consensus 20 ~~~~~~~i~N~g~~pl~i~~~-~~p~~~~~~~~~~~I---~PG~~g~I~vt~~~~~~~~~G~~~~~i~v~ 85 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQVAVV-SLPSFVSLDDRAFRL---QAREPRELNLSLAVPRNMPPGMKDEPLVLE 85 (220)
T ss_dssp CCEEEEEEEECSSSCEEEEEE-ECCTTEECSCCEEEE---CSSSCEEEEEEECCCTTCCSEEEEEEEEEE
T ss_pred cceEEEEEEeCCCCceEEEec-cCCCceEeeeCccee---CCCCceEEEEEEcchhcccCCceeeEEEEE
Confidence 355677899999988777764 347666665555555 799999999999876543223445666654
No 48
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=71.19 E-value=19 Score=29.89 Aligned_cols=52 Identities=12% Similarity=0.085 Sum_probs=41.8
Q ss_pred EEEEEEEEccCCCeEEEEEEeCCCCcEEEEEeCEEEEeeCCcEEEEEEEEEecc
Q 041372 480 SIHRTVTYYGEGPTVYVGHVNNPTGVNVSVSSAELKFTKTGEKMSFRVDFMPFK 533 (564)
Q Consensus 480 ~~~rtvtnvg~~~~ty~~~v~~p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~ 533 (564)
.++-.+.|....+.+|.++++.++++.+. .|..+.+ ++||.+++.|.+....
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECG
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEECh
Confidence 47778999999999999999988776543 3556888 6999989888887753
No 49
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=59.30 E-value=33 Score=34.66 Aligned_cols=55 Identities=11% Similarity=0.031 Sum_probs=41.7
Q ss_pred cEEEEEEEEEccCCCeEEEEEEeCCCCcE----EEEEeCEEEEeeCCcEEEEEEEEEecc
Q 041372 478 SLSIHRTVTYYGEGPTVYVGHVNNPTGVN----VSVSSAELKFTKTGEKMSFRVDFMPFK 533 (564)
Q Consensus 478 ~~~~~rtvtnvg~~~~ty~~~v~~p~g~~----v~v~p~~l~~~~~g~~~~~~vt~~~~~ 533 (564)
..+-+-+++|.|.-+..|.+.-....... .+|+|..-++ .+||+.+++|++....
T Consensus 47 ~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~ 105 (366)
T 3qis_A 47 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSK 105 (366)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCT
T ss_pred eEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECH
Confidence 34556678999999999998654332222 7789999999 7999999999987654
No 50
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=58.57 E-value=52 Score=27.56 Aligned_cols=70 Identities=11% Similarity=0.113 Sum_probs=43.5
Q ss_pred CCCcEEEEEEEEEccCCCe--------EEEEEEeCCCCcEEE---------EEeCEEEEeeCCcEEEEEEEEEecccCCC
Q 041372 475 MNGSLSIHRTVTYYGEGPT--------VYVGHVNNPTGVNVS---------VSSAELKFTKTGEKMSFRVDFMPFKKIGG 537 (564)
Q Consensus 475 ~~~~~~~~rtvtnvg~~~~--------ty~~~v~~p~g~~v~---------v~p~~l~~~~~g~~~~~~vt~~~~~~~~~ 537 (564)
..+...++.+|+|.++.+- .|...+....|-.|- ---...+| ++||+++|+.++..... .+
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~~~~-pG 93 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKEVPE-PG 93 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESSCCC-SE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCCCCC-Cc
Confidence 3457889999999997543 345555555564432 11235566 79999999999983222 33
Q ss_pred ce-EEEEEEE
Q 041372 538 SF-VFGDLTW 546 (564)
Q Consensus 538 ~~-~~G~l~w 546 (564)
.| +.+++.=
T Consensus 94 ~Ytl~a~l~~ 103 (120)
T 3isy_A 94 TYEVKVTFKG 103 (120)
T ss_dssp EEEEEEEECC
T ss_pred cEEEEEEEEe
Confidence 33 5565543
No 51
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=53.15 E-value=64 Score=27.26 Aligned_cols=52 Identities=13% Similarity=0.048 Sum_probs=36.6
Q ss_pred CCcEEEEEEEEEccCCC-eEEEEEEeCCCCcEEEEEeCEEEEeeCCcEEEEEEEEEe
Q 041372 476 NGSLSIHRTVTYYGEGP-TVYVGHVNNPTGVNVSVSSAELKFTKTGEKMSFRVDFMP 531 (564)
Q Consensus 476 ~~~~~~~rtvtnvg~~~-~ty~~~v~~p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~ 531 (564)
....+++-+|+|.|... .-|++.+-. .|..+.-. ...+ ++|++++++++..+
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEE-CTTCEEEEEEEECC
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--Eecc-CCCCeEEEEEEEEc
Confidence 44689999999999754 567777655 56555433 3356 68999888887763
No 52
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=51.82 E-value=56 Score=36.18 Aligned_cols=53 Identities=11% Similarity=0.150 Sum_probs=33.2
Q ss_pred cEEEEEEEEEccCCCeEEEE--EEeCCCCc------EEEEEeCEEEEeeCCcEEEEEEEEEec
Q 041372 478 SLSIHRTVTYYGEGPTVYVG--HVNNPTGV------NVSVSSAELKFTKTGEKMSFRVDFMPF 532 (564)
Q Consensus 478 ~~~~~rtvtnvg~~~~ty~~--~v~~p~g~------~v~v~p~~l~~~~~g~~~~~~vt~~~~ 532 (564)
..+++.+|||.|+-...-.+ =+..|.+- ..+=. .++.+ ++||+++++++++..
T Consensus 614 ~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF-~kv~L-~pGes~~V~~~l~~~ 674 (713)
T 3zyz_A 614 VATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGF-AKLNL-TPGQSGTATFNIRRR 674 (713)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEE-EEEEE-CTTCEEEEEEEEEGG
T ss_pred eEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhc-cccee-CCCCeEEEEEEEcHH
Confidence 46899999999975543333 33455331 11111 12335 799999999999865
No 53
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=48.25 E-value=15 Score=26.73 Aligned_cols=38 Identities=16% Similarity=0.061 Sum_probs=28.4
Q ss_pred ccchhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccc
Q 041372 350 SMSCPHVSAVAAIIKSHHPSWSPAAIMSAIMTTATVLN 387 (564)
Q Consensus 350 SMAaP~VAG~aALl~q~~P~~sp~~IksaL~~TA~~~~ 387 (564)
|-..|..--....|++.||+++...|+.+|...-..++
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~gdvd 40 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKD 40 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTCHH
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHH
Confidence 33344455567789999999999999999987655443
No 54
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=47.49 E-value=52 Score=36.50 Aligned_cols=71 Identities=15% Similarity=0.274 Sum_probs=44.8
Q ss_pred CCCCCCCcceeEeecCC-----CcEEEEEEEEEccCC--CeEEEEEEeCCCC-c-----EEEEEeCEE-EEeeCCcEEEE
Q 041372 460 PPSYNFNYPSIGVSNMN-----GSLSIHRTVTYYGEG--PTVYVGHVNNPTG-V-----NVSVSSAEL-KFTKTGEKMSF 525 (564)
Q Consensus 460 ~~~~~lN~psi~~~~~~-----~~~~~~rtvtnvg~~--~~ty~~~v~~p~g-~-----~v~v~p~~l-~~~~~g~~~~~ 525 (564)
+..+-|.|..|...++. +..+++.+|||.|+- .++-.+=+..|.+ + ..+=.- ++ .+ ++||++++
T Consensus 593 pFG~GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~-kv~~L-~pGes~~V 670 (721)
T 2x41_A 593 EFGYGLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFH-KTRLL-NPGESEEV 670 (721)
T ss_dssp CTTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEE-ECCCB-CTTCEEEE
T ss_pred ccCCCCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhccc-ccccC-CCCCeEEE
Confidence 34567888888776542 457899999999974 4444444455532 1 111111 22 24 78999999
Q ss_pred EEEEEec
Q 041372 526 RVDFMPF 532 (564)
Q Consensus 526 ~vt~~~~ 532 (564)
+++++..
T Consensus 671 ~~~l~~~ 677 (721)
T 2x41_A 671 VLEIPVR 677 (721)
T ss_dssp EEEEEGG
T ss_pred EEEECHH
Confidence 9999864
No 55
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=47.32 E-value=1.2e+02 Score=32.47 Aligned_cols=65 Identities=9% Similarity=0.015 Sum_probs=43.0
Q ss_pred CcceeEeecCCCcEEEEEEEEEccCCCeEE-EEEEeCCCCcEEEEEeCEEEEeeCCcEEEEEEEEEeccc
Q 041372 466 NYPSIGVSNMNGSLSIHRTVTYYGEGPTVY-VGHVNNPTGVNVSVSSAELKFTKTGEKMSFRVDFMPFKK 534 (564)
Q Consensus 466 N~psi~~~~~~~~~~~~rtvtnvg~~~~ty-~~~v~~p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~ 534 (564)
..|.+++..- ++.+++-+|+|-+..+..- ++++..|.+.+++. ....| ++||+.+++++|+....
T Consensus 363 ~~~~~~~~~g-~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~~ 428 (601)
T 1w8o_A 363 TIPDVALEPG-QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVPAG 428 (601)
T ss_dssp ECCCEEECTT-CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECCTT
T ss_pred cCccceecCC-ceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecCCC
Confidence 3466666532 5778889999976532211 33367799988877 34555 68999888888776643
No 56
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=44.73 E-value=81 Score=35.68 Aligned_cols=69 Identities=17% Similarity=0.325 Sum_probs=44.2
Q ss_pred CCCCCCCcceeEee--cC---CCcEEEEEEEEEcc-CCCeEEEEE--EeCCCC-c-----EEEEEeCEEEEeeCCcEEEE
Q 041372 460 PPSYNFNYPSIGVS--NM---NGSLSIHRTVTYYG-EGPTVYVGH--VNNPTG-V-----NVSVSSAELKFTKTGEKMSF 525 (564)
Q Consensus 460 ~~~~~lN~psi~~~--~~---~~~~~~~rtvtnvg-~~~~ty~~~--v~~p~g-~-----~v~v~p~~l~~~~~g~~~~~ 525 (564)
+-.+-|.|.+|... ++ .+..+++.+|||.| +-...-.+. +..|.+ + ..+-.- ++.+ ++||++++
T Consensus 713 PFG~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~-kv~L-~pGes~~V 790 (845)
T 3abz_A 713 PFGYGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFE-KVHL-EPGEKKTV 790 (845)
T ss_dssp CTTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEE-EEEE-CTTCEEEE
T ss_pred cccCCCcceeEEEecccccccCCeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheeccce-eEEE-CCCCEEEE
Confidence 44667899988887 54 35688999999999 654333332 233322 1 122111 2345 79999999
Q ss_pred EEEEE
Q 041372 526 RVDFM 530 (564)
Q Consensus 526 ~vt~~ 530 (564)
+++++
T Consensus 791 ~~~l~ 795 (845)
T 3abz_A 791 NIDLE 795 (845)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 99998
No 57
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=42.73 E-value=6.4 Score=33.04 Aligned_cols=48 Identities=19% Similarity=0.173 Sum_probs=30.3
Q ss_pred EEEEccCCCeEEEEEEe-CCCCcEEEEEeCEEEEe-eCCcEEEEEEEEEe
Q 041372 484 TVTYYGEGPTVYVGHVN-NPTGVNVSVSSAELKFT-KTGEKMSFRVDFMP 531 (564)
Q Consensus 484 tvtnvg~~~~ty~~~v~-~p~g~~v~v~p~~l~~~-~~g~~~~~~vt~~~ 531 (564)
-+++.+.+.-+....++ .|.|++++++|..++++ ..-++++|.|++..
T Consensus 60 DLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~ 109 (119)
T 2kq1_A 60 DLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEM 109 (119)
T ss_dssp ECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCC
T ss_pred ECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEE
Confidence 34444443333444556 78999999999998875 22335677776543
No 58
>2l04_A Major tail protein V; bacteriophage lambda, phage tail, GPV, IG-like domain, viral; NMR {Enterobacteria phage lambda}
Probab=40.93 E-value=30 Score=27.44 Aligned_cols=37 Identities=16% Similarity=0.243 Sum_probs=27.3
Q ss_pred EEEEEeCEEEEeeCCcEEEEEEEEEecccCCCceEEEEEEEEC
Q 041372 506 NVSVSSAELKFTKTGEKMSFRVDFMPFKKIGGSFVFGDLTWSN 548 (564)
Q Consensus 506 ~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~G~l~w~~ 548 (564)
.|++.|..+.+ +.|++..++.++.+....+. .++|++
T Consensus 8 ~i~l~~~~~~l-~vG~t~~L~atv~P~~Atnk-----~vtwsS 44 (91)
T 2l04_A 8 GMTVTPASTSV-VKGQSTTLTVAFQPEGVTDK-----SFRAVS 44 (91)
T ss_dssp CEEEECCCEEE-ETTCEEEEEEEECCSSCCCC-----CEEECC
T ss_pred EEEEeCCceEE-EcCCEEEEEEEEeccccCcc-----EEEEEE
Confidence 47889999999 68999999998876543222 366764
No 59
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=39.06 E-value=83 Score=29.00 Aligned_cols=54 Identities=15% Similarity=0.172 Sum_probs=37.1
Q ss_pred CcEEEEEEEEEccCCCeEEEEEEeCCCCcEEEEEeCEEEEeeCCcEEEEEEEEEecc
Q 041372 477 GSLSIHRTVTYYGEGPTVYVGHVNNPTGVNVSVSSAELKFTKTGEKMSFRVDFMPFK 533 (564)
Q Consensus 477 ~~~~~~rtvtnvg~~~~ty~~~v~~p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~ 533 (564)
...+.+.+++|.|+.+-..+ .++...|..+ +++..-.+ ++||+.+++|++++..
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~-~v~~scgct~-~~~~~~~i-~PGe~~~i~v~~~~~~ 187 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLH-SVTTRNPALT-AVPDRTEI-KPGGSTLLRIAVDPQV 187 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEE-EEEECSTTEE-EEESCSEE-CTTCEEEEEEEECHHH
T ss_pred CeEEEEEEEEECCCCCEEEE-EEEeCCCCEe-eecCCccC-CCCCEEEEEEEEecCC
Confidence 34677889999998776554 4445556443 33444445 7999999999998754
No 60
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=35.65 E-value=1.4e+02 Score=24.99 Aligned_cols=52 Identities=19% Similarity=0.138 Sum_probs=42.3
Q ss_pred cEEEEEEEEEccCCCeEEEEEEeCCCCcEEEEEeCEEEEeeCCcEEEEEEEEEec
Q 041372 478 SLSIHRTVTYYGEGPTVYVGHVNNPTGVNVSVSSAELKFTKTGEKMSFRVDFMPF 532 (564)
Q Consensus 478 ~~~~~rtvtnvg~~~~ty~~~v~~p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~ 532 (564)
..+-.-+++|.++..-.|.++-.+|.- ..|.|..=.+ ++||+..+.|++.+.
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~--y~VrP~~Gii-~P~~s~~v~V~~q~~ 77 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRR--LSVDPPCGVL-DPKEKVLMAVSCDTF 77 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTT--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCc--EEEECCCeEE-CCCCEEEEEEEecCC
Confidence 344556799999988899999988876 5678888777 799999999998773
No 61
>3lyw_A YBBR family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.90A {Desulfitobacterium hafniense} PDB: 2kpu_A 2l5n_A
Probab=33.39 E-value=18 Score=28.84 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=26.9
Q ss_pred EEEEEccCCCeEEEEEEeCCCCcE-EEEEeCEEEEe
Q 041372 483 RTVTYYGEGPTVYVGHVNNPTGVN-VSVSSAELKFT 517 (564)
Q Consensus 483 rtvtnvg~~~~ty~~~v~~p~g~~-v~v~p~~l~~~ 517 (564)
--++.+.++..+|.+++..|.|++ ++|+|+.+++.
T Consensus 47 VDLsg~~~G~~~~~V~v~~P~G~~lv~vsP~~V~~~ 82 (90)
T 3lyw_A 47 VDLSGSEPGEHDYEVKVEPIPNIKIVEISPRVVTLQ 82 (90)
T ss_dssp EECTTCCSEEEEEECEECCCTTEEEEEEESSEEEEE
T ss_pred EECcCCCCCcEeEEEEEECCCCCEEEEEccceEEEE
Confidence 345555566678888999999987 46999999873
No 62
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=30.31 E-value=1.7e+02 Score=24.22 Aligned_cols=53 Identities=11% Similarity=0.182 Sum_probs=42.8
Q ss_pred CcEEEEEEEEEccCCCeEEEEEEeCCCCcEEEEEeCEEEEeeCCcEEEEEEEEEec
Q 041372 477 GSLSIHRTVTYYGEGPTVYVGHVNNPTGVNVSVSSAELKFTKTGEKMSFRVDFMPF 532 (564)
Q Consensus 477 ~~~~~~rtvtnvg~~~~ty~~~v~~p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~ 532 (564)
..++-.-+++|..+..-.|.++-.+|.- ..|.|..=.+ ++|++..++|++.+.
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~~--y~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGGG--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCCc--eEEeCCCcEE-CCCCeEEEEEEECcC
Confidence 3456677899999888889999888865 5678887666 799999999999864
No 63
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=29.36 E-value=1.7e+02 Score=25.36 Aligned_cols=51 Identities=10% Similarity=0.021 Sum_probs=41.8
Q ss_pred EEEEEEEEEccCCCeEEEEEEeCCCCcEEEEEeCEEEEeeCCcEEEEEEEEEec
Q 041372 479 LSIHRTVTYYGEGPTVYVGHVNNPTGVNVSVSSAELKFTKTGEKMSFRVDFMPF 532 (564)
Q Consensus 479 ~~~~rtvtnvg~~~~ty~~~v~~p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~ 532 (564)
++-.-+++|..+....|.++-.+|.- ..|.|..=.+ ++|++.+++|++.+.
T Consensus 37 ~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 37 KKTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CCEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEE-CTTCEEEEEEEECSS
T ss_pred EEEEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEE-CCCCeEEEEEEecCc
Confidence 34567799999888899999888865 5678988777 799999999999764
No 64
>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4
Probab=25.75 E-value=61 Score=22.52 Aligned_cols=26 Identities=12% Similarity=0.234 Sum_probs=21.9
Q ss_pred HHHHHHhhCCCCCHHHHHHHHHhccc
Q 041372 359 VAAIIKSHHPSWSPAAIMSAIMTTAT 384 (564)
Q Consensus 359 ~aALl~q~~P~~sp~~IksaL~~TA~ 384 (564)
-..+|.+.||+.+..+||..|...--
T Consensus 7 ~v~~L~EMFP~~~~~~ik~~L~~~~G 32 (49)
T 1otr_A 7 KLSILMDMFPAISKSKLQVHLLENNN 32 (49)
T ss_dssp HHHHHHHHCSSSCHHHHHHHHHHTTT
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHcCC
Confidence 35688999999999999999987543
No 65
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=24.14 E-value=2.5e+02 Score=21.77 Aligned_cols=67 Identities=19% Similarity=0.240 Sum_probs=39.2
Q ss_pred EEEEccCCCeEEEEEEeCCCCcEEEEEeCEEEEeeCCcEEEEEEEEEecccCCCceEEEEEEEECCceEEEceEEEEEe
Q 041372 484 TVTYYGEGPTVYVGHVNNPTGVNVSVSSAELKFTKTGEKMSFRVDFMPFKKIGGSFVFGDLTWSNGIHRVRSPIGLNVL 562 (564)
Q Consensus 484 tvtnvg~~~~ty~~~v~~p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~G~l~w~~~~h~vr~Pi~v~~~ 562 (564)
+|+-.+.+.....+.+..|.++.+.+ .- .+.-+|+|+++... .+.| .=.+.| ++.|.-.||+.+...
T Consensus 28 ~v~t~dag~~~l~v~v~~p~~~~~~v-----~d---~~dGty~v~Y~p~~--~G~y-~i~V~~-~g~~I~gSPF~v~v~ 94 (97)
T 2bp3_A 28 TVNTKDAGEGGLSLAIEGPSKAEISC-----TD---NQDGTCSVSYLPVL--PGDY-SILVKY-NEQHVPGSPFTARVT 94 (97)
T ss_dssp EEECTTCCSEEEEEEEEESSCCEEEE-----EE---CSSSEEEEEEECSS--CEEE-EEEEEE-TTEECTTCSEEEEEE
T ss_pred EEEECCCCCCcEEEEEECCCCCEEEE-----EE---CCCCEEEEEEEeCC--CCcE-EEEEEE-CCEECCCcCEEEEEe
Confidence 44444444556677777787755532 11 22237888887643 2333 222344 568888999998764
No 66
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=24.13 E-value=2e+02 Score=24.54 Aligned_cols=52 Identities=12% Similarity=0.183 Sum_probs=41.8
Q ss_pred cEEEEEEEEEccCCCeEEEEEEeCCCCcEEEEEeCEEEEeeCCcEEEEEEEEEec
Q 041372 478 SLSIHRTVTYYGEGPTVYVGHVNNPTGVNVSVSSAELKFTKTGEKMSFRVDFMPF 532 (564)
Q Consensus 478 ~~~~~rtvtnvg~~~~ty~~~v~~p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~ 532 (564)
.++-.-+++|..+..-.|.++-.+|.- ..|.|..=.+ ++|++..++|++.+.
T Consensus 32 ~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 32 VVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp CCCEEEEEECCSSSCEEEEEEESCTTS--EEEESSEEEC-CTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCcEEEEEECCCCcc--EEEcCCCcEE-CCCCeEEEEEEECCC
Confidence 345567799999888889999998876 5578887666 799999999999764
No 67
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=23.89 E-value=2.9e+02 Score=22.28 Aligned_cols=65 Identities=20% Similarity=0.144 Sum_probs=43.5
Q ss_pred eeEeecCCCcEEEEEEEEEccCCCeEEEEEEeCCCCcEEEEEeCEEEEeeCCcEEEEEEEEEecccCCCceEEEEEE
Q 041372 469 SIGVSNMNGSLSIHRTVTYYGEGPTVYVGHVNNPTGVNVSVSSAELKFTKTGEKMSFRVDFMPFKKIGGSFVFGDLT 545 (564)
Q Consensus 469 si~~~~~~~~~~~~rtvtnvg~~~~ty~~~v~~p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~G~l~ 545 (564)
.+.|........++-+|+|-..+..+|.-....|.- + .+.+ ...++-+|+|.+... ..+..|..+
T Consensus 35 vlsV~F~~~~~~vTItItNe~TG~~VYs~~~s~p~~--i-----~IdL-nge~sG~Y~IeI~~~----~~~LtG~F~ 99 (101)
T 3sd2_A 35 ILNVSFGRAKDYAIITVTNKATGEIVHSKTYHNTSI--V-----MIDM-SSCEKGEYTIHIILN----DCLLEGTFT 99 (101)
T ss_dssp EEEEEESSCCSCEEEEEEETTTCCEEEEEEESSCSE--E-----EEEC-TTSCSEEEEEEEEET----TEEEEEEEE
T ss_pred EEEEEeccCCCcEEEEEEECCCCcEEEEEeccCCcE--E-----EEEc-CCCcCceEEEEEEeC----CcEEEEEEE
Confidence 555655555567888999987788899987777542 2 2233 233478899988753 357778765
No 68
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.67 E-value=64 Score=24.03 Aligned_cols=28 Identities=11% Similarity=0.118 Sum_probs=22.8
Q ss_pred HHHHHHhhCCCCCHHHHHHHHHhccccc
Q 041372 359 VAAIIKSHHPSWSPAAIMSAIMTTATVL 386 (564)
Q Consensus 359 ~aALl~q~~P~~sp~~IksaL~~TA~~~ 386 (564)
...-|++.||++....|+..|...-..+
T Consensus 21 ~v~~L~~MFP~lD~~vI~~vL~a~~G~v 48 (67)
T 2dhy_A 21 AMDDFKTMFPNMDYDIIECVLRANSGAV 48 (67)
T ss_dssp HHHHHHHHCSSSCHHHHHHHHHHHTSCH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHcCCCH
Confidence 4556899999999999999998765443
No 69
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=23.38 E-value=4.7e+02 Score=24.62 Aligned_cols=51 Identities=16% Similarity=0.310 Sum_probs=35.7
Q ss_pred EEEEEEEEEccCCCeEEEEE--EeC------CC--CcEEEEEeCEEEEeeCCcEEEEEEEEEec
Q 041372 479 LSIHRTVTYYGEGPTVYVGH--VNN------PT--GVNVSVSSAELKFTKTGEKMSFRVDFMPF 532 (564)
Q Consensus 479 ~~~~rtvtnvg~~~~ty~~~--v~~------p~--g~~v~v~p~~l~~~~~g~~~~~~vt~~~~ 532 (564)
...+.+|+|.|+.+ |.+. ++. |. ...+.|.|..+.+ ++|+++.+.|.....
T Consensus 44 k~~sl~l~N~~~~P--~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~~ 104 (257)
T 3q48_A 44 REVTLRVSNTSGTP--VLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLKA 104 (257)
T ss_dssp SEEEEEEEECSSSC--EEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECCC
T ss_pred cEEEEEEEeCCCCe--EEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECCC
Confidence 45667899988654 4443 332 11 2348999999999 799999999976543
No 70
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=22.19 E-value=3.1e+02 Score=22.14 Aligned_cols=49 Identities=6% Similarity=-0.073 Sum_probs=39.3
Q ss_pred EEEEEEEccCCCeEEEEEEeCCCCcEEEEEeCEEEEeeCCcEEEEEEEEEec
Q 041372 481 IHRTVTYYGEGPTVYVGHVNNPTGVNVSVSSAELKFTKTGEKMSFRVDFMPF 532 (564)
Q Consensus 481 ~~rtvtnvg~~~~ty~~~v~~p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~ 532 (564)
-+-+++|..+..-.|.++-.+|.- ..|.|..=.+ ++|++.++.|+..+.
T Consensus 19 ~~l~L~N~t~~~vaFKVKtT~p~~--y~VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 19 STHKLVNGGAEKIVFKIKSSNNNE--YRIAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEECSSSCEEEEEEESCSSS--EEEECSEEEE-CTTEEEEEEEEECSC
T ss_pred EEEEEEcCCCCeEEEEEEeCCCCc--eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 456789999888889988888765 5677887766 799999999998764
No 71
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=21.62 E-value=3.4e+02 Score=22.32 Aligned_cols=50 Identities=10% Similarity=0.046 Sum_probs=39.5
Q ss_pred EEEEEEEEccCCCeEEEEEEeCCCCcEEEEEeCEEEEeeCCcEEEEEEEEEec
Q 041372 480 SIHRTVTYYGEGPTVYVGHVNNPTGVNVSVSSAELKFTKTGEKMSFRVDFMPF 532 (564)
Q Consensus 480 ~~~rtvtnvg~~~~ty~~~v~~p~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~ 532 (564)
+.+-+++|..+..-.|.++-..|.- ..|.|..=.+ ++|++.++.|+..+.
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~~--YrVrP~~G~I-~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNEH--YRVRPVYGFV-DAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTTT--EEEECSEEEE-CTTCEEEEEEEECSC
T ss_pred EEEEEEECCCCCeEEEEEEecCCCc--eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 4567789999888888888887765 5667887666 799999999998764
No 72
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=21.32 E-value=70 Score=28.05 Aligned_cols=25 Identities=12% Similarity=0.104 Sum_probs=23.8
Q ss_pred hhhHHHHHHHHHhhCCCCCHHHHHH
Q 041372 353 CPHVSAVAAIIKSHHPSWSPAAIMS 377 (564)
Q Consensus 353 aP~VAG~aALl~q~~P~~sp~~Iks 377 (564)
|+.|-|++|||.+.+-..+|++|.+
T Consensus 85 A~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 85 GRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp SHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 7999999999999999999999985
No 73
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=20.68 E-value=1.2e+02 Score=30.79 Aligned_cols=49 Identities=22% Similarity=0.288 Sum_probs=32.7
Q ss_pred CcEEEEEEEEEccCCCe---EEE-EEE--e----------CCC------CcEEEEEeCEEEEeeCCcEEEEEEEEEe
Q 041372 477 GSLSIHRTVTYYGEGPT---VYV-GHV--N----------NPT------GVNVSVSSAELKFTKTGEKMSFRVDFMP 531 (564)
Q Consensus 477 ~~~~~~rtvtnvg~~~~---ty~-~~v--~----------~p~------g~~v~v~p~~l~~~~~g~~~~~~vt~~~ 531 (564)
+..+++.+|||.|+.+. .|+ +.+ . .|. | ++ +|+ -+ .+||+++++|+++.
T Consensus 298 R~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~G--L~-s~~--pI-~PGETrt~~V~a~d 368 (419)
T 3rfr_A 298 RELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRG--LS-NDD--VI-APGESKEIVVKIQD 368 (419)
T ss_dssp SEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCC--CC-CCC--CB-CTTCEEEEEEEEEC
T ss_pred cEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccC--CC-CCC--Cc-CCCcceEEEEEeeh
Confidence 46789999999998653 222 111 1 122 3 45 677 45 79999999999875
No 74
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=20.05 E-value=1.1e+02 Score=24.50 Aligned_cols=23 Identities=13% Similarity=0.293 Sum_probs=18.4
Q ss_pred EEeCCCCcEEEEEeCEEEEeeCC
Q 041372 498 HVNNPTGVNVSVSSAELKFTKTG 520 (564)
Q Consensus 498 ~v~~p~g~~v~v~p~~l~~~~~g 520 (564)
-+.-|+||+|++.-..++++-+-
T Consensus 16 pI~IP~gV~V~i~~~~VtVKGPk 38 (100)
T 2cql_A 16 TVDIPENVDITLKGRTVIVKGPR 38 (100)
T ss_dssp EECCCSSCEEEEETTEEEEEETT
T ss_pred cEEcCCCCEEEEeCCEEEEECCC
Confidence 56778999999999999986443
Done!