Query 041373
Match_columns 395
No_of_seqs 277 out of 1822
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 06:26:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041373.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041373hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd07425 MPP_Shelphs Shewanella 100.0 2.2E-36 4.7E-41 280.1 18.0 205 61-344 1-207 (208)
2 PRK13625 bis(5'-nucleosyl)-tet 100.0 2.4E-35 5.2E-40 279.8 21.6 237 58-367 1-240 (245)
3 PHA02239 putative protein phos 100.0 1.2E-34 2.6E-39 272.8 20.0 219 58-337 1-222 (235)
4 cd07413 MPP_PA3087 Pseudomonas 100.0 1.8E-34 4E-39 269.9 18.8 218 61-351 2-219 (222)
5 cd07421 MPP_Rhilphs Rhilph pho 100.0 7.8E-34 1.7E-38 270.9 19.5 239 58-358 2-298 (304)
6 cd07423 MPP_PrpE Bacillus subt 100.0 5.6E-32 1.2E-36 255.0 20.2 229 58-363 1-233 (234)
7 PRK11439 pphA serine/threonine 100.0 4.6E-32 1E-36 253.0 17.8 201 54-348 13-217 (218)
8 PRK00166 apaH diadenosine tetr 100.0 8.8E-32 1.9E-36 258.5 19.9 233 58-357 1-266 (275)
9 TIGR00668 apaH bis(5'-nucleosy 100.0 3.2E-32 6.9E-37 259.6 15.8 227 58-354 1-263 (279)
10 cd07420 MPP_RdgC Drosophila me 100.0 1.4E-30 3.1E-35 254.1 20.4 276 18-357 3-318 (321)
11 cd07422 MPP_ApaH Escherichia c 100.0 1.9E-31 4.2E-36 253.6 13.9 224 60-349 1-257 (257)
12 cd07417 MPP_PP5_C PP5, C-termi 100.0 1.1E-29 2.3E-34 248.3 21.1 272 14-359 8-301 (316)
13 PRK09968 serine/threonine-spec 100.0 5.8E-29 1.3E-33 232.1 17.7 203 55-349 12-218 (218)
14 smart00156 PP2Ac Protein phosp 100.0 7.1E-28 1.5E-32 231.5 21.4 228 58-359 28-267 (271)
15 cd07419 MPP_Bsu1_C Arabidopsis 100.0 5.5E-28 1.2E-32 236.5 19.7 244 58-360 48-310 (311)
16 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1.5E-27 3.2E-32 230.4 20.2 230 58-360 42-282 (285)
17 cd00144 MPP_PPP_family phospho 100.0 1.2E-27 2.6E-32 223.0 17.9 215 61-347 1-224 (225)
18 cd07424 MPP_PrpA_PrpB PrpA and 100.0 8.5E-28 1.8E-32 222.5 16.2 202 58-348 1-206 (207)
19 PTZ00244 serine/threonine-prot 100.0 3.1E-27 6.7E-32 228.8 20.0 226 58-357 52-289 (294)
20 PTZ00480 serine/threonine-prot 100.0 6.8E-27 1.5E-31 228.0 20.6 247 57-381 58-317 (320)
21 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 4.9E-27 1.1E-31 227.6 19.2 226 58-358 50-288 (293)
22 PTZ00239 serine/threonine prot 99.9 9.7E-27 2.1E-31 226.1 20.9 233 57-362 42-286 (303)
23 cd07416 MPP_PP2B PP2B, metallo 99.9 3.6E-26 7.7E-31 222.9 22.8 224 58-357 43-292 (305)
24 cd07418 MPP_PP7 PP7, metalloph 99.9 2.4E-26 5.2E-31 227.8 20.4 231 55-352 63-354 (377)
25 KOG0372 Serine/threonine speci 99.9 1.5E-26 3.3E-31 211.4 11.9 231 57-361 42-286 (303)
26 KOG0374 Serine/threonine speci 99.9 5.7E-25 1.2E-29 215.2 17.9 232 58-363 59-304 (331)
27 KOG0373 Serine/threonine speci 99.9 2.4E-23 5.2E-28 187.7 11.6 236 55-363 43-292 (306)
28 KOG0371 Serine/threonine prote 99.9 1.6E-22 3.4E-27 186.3 9.5 233 55-361 57-301 (319)
29 KOG0377 Protein serine/threoni 99.9 7.2E-23 1.6E-27 199.9 6.3 284 10-356 117-426 (631)
30 KOG0375 Serine-threonine phosp 99.9 3.5E-22 7.6E-27 191.1 7.3 225 52-350 82-331 (517)
31 KOG0376 Serine-threonine phosp 99.7 5E-16 1.1E-20 155.3 11.4 270 16-359 164-455 (476)
32 PRK09453 phosphodiesterase; Pr 99.5 1.8E-12 4E-17 117.4 15.3 68 58-140 1-76 (182)
33 TIGR00040 yfcE phosphoesterase 99.4 7.3E-12 1.6E-16 110.8 13.5 64 58-140 1-64 (158)
34 cd00841 MPP_YfcE Escherichia c 99.2 2.5E-10 5.3E-15 100.3 14.1 59 59-140 1-59 (155)
35 PF12850 Metallophos_2: Calcin 99.1 8E-10 1.7E-14 96.4 13.0 61 58-141 1-61 (156)
36 cd07397 MPP_DevT Myxococcus xa 99.0 1.1E-08 2.4E-13 96.3 14.7 63 59-142 2-65 (238)
37 PRK05340 UDP-2,3-diacylglucosa 99.0 1.4E-08 3E-13 96.2 15.0 70 58-140 1-83 (241)
38 cd07394 MPP_Vps29 Homo sapiens 98.9 3.7E-08 8E-13 89.2 14.4 58 59-139 1-64 (178)
39 cd07379 MPP_239FB Homo sapiens 98.9 1.6E-08 3.4E-13 87.0 10.9 60 59-139 1-62 (135)
40 cd07392 MPP_PAE1087 Pyrobaculu 98.8 1.9E-07 4.2E-12 83.8 14.3 66 60-142 1-67 (188)
41 PF00149 Metallophos: Calcineu 98.8 2E-08 4.4E-13 86.0 7.4 76 58-143 1-81 (200)
42 cd07388 MPP_Tt1561 Thermus the 98.7 3.8E-08 8.2E-13 92.3 8.3 72 57-140 4-75 (224)
43 COG0622 Predicted phosphoester 98.6 1.9E-06 4.1E-11 77.5 15.1 54 304-360 109-164 (172)
44 cd07402 MPP_GpdQ Enterobacter 98.5 2.1E-06 4.6E-11 80.5 12.5 69 59-140 1-83 (240)
45 PRK11148 cyclic 3',5'-adenosin 98.4 8.7E-06 1.9E-10 78.6 15.1 72 56-139 13-97 (275)
46 PF06874 FBPase_2: Firmicute f 98.4 1.4E-05 2.9E-10 83.5 16.9 148 214-361 387-585 (640)
47 cd07398 MPP_YbbF-LpxH Escheric 98.4 1.3E-06 2.8E-11 80.7 8.0 36 295-334 181-216 (217)
48 COG2129 Predicted phosphoester 98.3 8.7E-05 1.9E-09 68.8 19.5 76 56-143 2-80 (226)
49 cd07383 MPP_Dcr2 Saccharomyces 98.3 1.6E-05 3.5E-10 72.8 14.3 42 94-138 43-87 (199)
50 PRK04036 DNA polymerase II sma 98.3 5.1E-05 1.1E-09 79.5 18.2 83 53-141 239-344 (504)
51 cd07399 MPP_YvnB Bacillus subt 98.2 0.00013 2.8E-09 67.9 18.1 69 59-139 2-81 (214)
52 PRK11340 phosphodiesterase Yae 98.2 5.4E-06 1.2E-10 80.0 8.2 72 55-139 47-124 (271)
53 cd07385 MPP_YkuE_C Bacillus su 98.2 3.4E-06 7.4E-11 78.2 6.4 71 57-140 1-76 (223)
54 cd07404 MPP_MS158 Microscilla 98.0 5.5E-06 1.2E-10 73.6 4.2 68 60-140 1-68 (166)
55 TIGR03729 acc_ester putative p 98.0 1.3E-05 2.9E-10 75.6 7.0 68 59-140 1-74 (239)
56 cd00838 MPP_superfamily metall 98.0 1.7E-05 3.7E-10 65.6 6.0 69 61-138 1-69 (131)
57 TIGR00619 sbcd exonuclease Sbc 97.9 2.9E-05 6.2E-10 74.2 8.3 72 58-140 1-88 (253)
58 PHA02546 47 endonuclease subun 97.9 2.6E-05 5.7E-10 77.7 7.9 75 58-140 1-89 (340)
59 cd07396 MPP_Nbla03831 Homo sap 97.8 5.3E-05 1.2E-09 72.8 8.3 73 59-142 2-88 (267)
60 TIGR01854 lipid_A_lpxH UDP-2,3 97.8 4.3E-05 9.3E-10 71.9 6.7 71 60-140 1-81 (231)
61 cd07391 MPP_PF1019 Pyrococcus 97.6 0.0001 2.2E-09 66.1 6.2 44 94-141 43-89 (172)
62 cd00840 MPP_Mre11_N Mre11 nucl 97.6 0.00014 3E-09 67.0 7.3 76 59-142 1-91 (223)
63 cd07403 MPP_TTHA0053 Thermus t 97.6 8.4E-05 1.8E-09 63.6 5.1 56 61-138 1-56 (129)
64 cd07390 MPP_AQ1575 Aquifex aeo 97.6 0.00013 2.9E-09 65.2 6.6 42 93-142 43-84 (168)
65 PRK10966 exonuclease subunit S 97.6 0.00031 6.7E-09 71.7 9.4 71 58-140 1-87 (407)
66 COG4186 Predicted phosphoester 97.5 0.0003 6.6E-09 61.4 7.5 69 57-139 3-85 (186)
67 TIGR00583 mre11 DNA repair pro 97.5 0.00028 6.1E-09 71.8 8.3 79 55-141 1-124 (405)
68 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.5 0.00018 3.8E-09 69.2 5.7 75 60-140 1-86 (262)
69 cd07400 MPP_YydB Bacillus subt 97.5 0.00023 5E-09 61.3 5.9 42 94-139 37-80 (144)
70 cd07393 MPP_DR1119 Deinococcus 97.4 0.00037 8.1E-09 65.6 6.9 41 94-139 43-83 (232)
71 COG0420 SbcD DNA repair exonuc 97.4 0.00038 8.3E-09 70.5 7.4 75 58-140 1-88 (390)
72 cd08165 MPP_MPPE1 human MPPE1 97.3 0.00049 1.1E-08 60.9 6.1 46 94-139 40-88 (156)
73 COG3855 Fbp Uncharacterized pr 97.3 0.0053 1.2E-07 62.1 13.7 41 94-142 192-232 (648)
74 COG2908 Uncharacterized protei 97.2 0.00055 1.2E-08 64.1 6.0 68 61-141 1-81 (237)
75 TIGR00024 SbcD_rel_arch putati 97.2 0.00057 1.2E-08 64.2 6.1 71 58-140 15-102 (225)
76 COG1409 Icc Predicted phosphoh 97.2 0.0011 2.4E-08 63.4 8.1 75 58-143 1-81 (301)
77 cd07395 MPP_CSTP1 Homo sapiens 97.2 0.0014 2.9E-08 62.6 8.6 77 57-140 4-99 (262)
78 cd07386 MPP_DNA_pol_II_small_a 97.0 0.0012 2.6E-08 62.5 5.9 72 61-140 2-94 (243)
79 COG1408 Predicted phosphohydro 96.9 0.0026 5.7E-08 61.8 7.6 73 56-141 43-119 (284)
80 cd07401 MPP_TMEM62_N Homo sapi 96.9 0.0022 4.8E-08 61.3 7.0 74 60-141 2-90 (256)
81 cd00845 MPP_UshA_N_like Escher 96.9 0.0021 4.5E-08 60.8 6.3 66 59-139 2-81 (252)
82 PF14582 Metallophos_3: Metall 96.8 0.0019 4.2E-08 60.1 4.9 73 57-141 5-103 (255)
83 cd08166 MPP_Cdc1_like_1 unchar 96.7 0.0024 5.2E-08 58.6 5.2 47 94-140 44-93 (195)
84 cd00839 MPP_PAPs purple acid p 96.5 0.0035 7.7E-08 60.6 5.1 70 57-141 4-82 (294)
85 cd07380 MPP_CWF19_N Schizosacc 96.4 0.0071 1.5E-07 53.2 5.8 68 61-138 1-68 (150)
86 cd07384 MPP_Cdc1_like Saccharo 96.4 0.01 2.3E-07 53.2 7.0 47 94-140 47-100 (171)
87 COG1407 Predicted ICC-like pho 95.8 0.016 3.4E-07 54.6 5.4 71 56-139 18-109 (235)
88 cd07410 MPP_CpdB_N Escherichia 95.8 0.015 3.2E-07 56.1 5.3 35 298-334 212-246 (277)
89 cd08163 MPP_Cdc1 Saccharomyces 95.2 0.034 7.4E-07 53.3 5.7 46 94-139 47-96 (257)
90 PLN02533 probable purple acid 95.1 0.042 9.1E-07 56.6 6.3 74 56-140 138-211 (427)
91 cd07408 MPP_SA0022_N Staphyloc 94.9 0.053 1.2E-06 51.7 6.1 65 59-139 2-81 (257)
92 cd08164 MPP_Ted1 Saccharomyces 94.8 0.084 1.8E-06 48.4 6.8 68 65-139 24-110 (193)
93 cd07411 MPP_SoxB_N Thermus the 94.6 0.064 1.4E-06 51.4 5.8 46 300-349 203-248 (264)
94 cd07412 MPP_YhcR_N Bacillus su 94.5 0.092 2E-06 51.1 6.7 66 59-139 2-87 (288)
95 COG1768 Predicted phosphohydro 94.4 0.076 1.6E-06 47.8 5.2 43 92-141 43-87 (230)
96 KOG3662 Cell division control 93.9 0.096 2.1E-06 53.1 5.4 79 55-140 46-144 (410)
97 TIGR00282 metallophosphoestera 93.9 0.16 3.5E-06 48.9 6.7 67 58-139 1-70 (266)
98 cd07378 MPP_ACP5 Homo sapiens 93.8 0.14 3E-06 49.0 6.2 23 294-317 192-214 (277)
99 KOG3325 Membrane coat complex 93.7 0.47 1E-05 41.5 8.5 62 59-139 2-65 (183)
100 cd07406 MPP_CG11883_N Drosophi 93.0 0.21 4.4E-06 47.8 6.0 66 59-139 2-82 (257)
101 KOG1432 Predicted DNA repair e 92.8 0.39 8.5E-06 47.4 7.5 48 93-141 101-148 (379)
102 cd07409 MPP_CD73_N CD73 ecto-5 92.4 0.31 6.7E-06 47.2 6.3 66 59-139 2-93 (281)
103 COG1311 HYS2 Archaeal DNA poly 92.1 0.42 9E-06 49.3 7.0 81 54-140 222-321 (481)
104 PRK09419 bifunctional 2',3'-cy 91.2 0.37 8E-06 55.9 6.3 67 58-139 661-735 (1163)
105 cd07382 MPP_DR1281 Deinococcus 89.7 0.94 2E-05 43.4 6.7 66 59-139 1-69 (255)
106 KOG3947 Phosphoesterases [Gene 88.6 1.7 3.6E-05 41.9 7.3 95 22-140 31-126 (305)
107 cd00842 MPP_ASMase acid sphing 88.6 0.76 1.7E-05 44.5 5.3 74 61-142 41-124 (296)
108 cd07407 MPP_YHR202W_N Saccharo 88.3 0.64 1.4E-05 45.2 4.5 70 59-140 7-97 (282)
109 cd08162 MPP_PhoA_N Synechococc 87.2 0.83 1.8E-05 45.1 4.7 70 59-139 2-90 (313)
110 cd07405 MPP_UshA_N Escherichia 87.1 1.1 2.3E-05 43.6 5.2 70 59-139 2-86 (285)
111 PRK09420 cpdB bifunctional 2', 85.2 1.6 3.4E-05 47.5 5.9 68 57-139 25-121 (649)
112 KOG2476 Uncharacterized conser 84.6 2.3 5E-05 43.6 6.3 70 58-137 6-75 (528)
113 TIGR01390 CycNucDiestase 2',3' 84.4 1.3 2.9E-05 47.9 4.9 66 59-139 4-98 (626)
114 COG0639 ApaH Diadenosine tetra 84.0 0.66 1.4E-05 38.8 1.9 114 216-350 29-152 (155)
115 COG0737 UshA 5'-nucleotidase/2 83.8 1.3 2.8E-05 46.7 4.4 68 57-139 26-114 (517)
116 KOG2679 Purple (tartrate-resis 82.8 2.1 4.5E-05 41.2 4.9 73 55-139 41-125 (336)
117 cd07387 MPP_PolD2_C PolD2 (DNA 82.6 5.7 0.00012 38.1 7.9 81 60-141 2-108 (257)
118 PRK09419 bifunctional 2',3'-cy 82.0 2.1 4.6E-05 49.7 5.6 68 57-139 41-138 (1163)
119 PRK11907 bifunctional 2',3'-cy 80.6 2.8 6.1E-05 46.6 5.7 67 58-139 116-212 (814)
120 KOG2863 RNA lariat debranching 80.0 3.5 7.6E-05 41.2 5.5 79 58-141 1-89 (456)
121 TIGR01530 nadN NAD pyrophospha 79.8 3.9 8.4E-05 43.6 6.3 39 93-139 50-93 (550)
122 PRK09558 ushA bifunctional UDP 79.5 0.91 2E-05 48.3 1.4 72 57-139 34-120 (551)
123 PF04042 DNA_pol_E_B: DNA poly 79.1 4.3 9.3E-05 37.1 5.6 76 60-142 1-93 (209)
124 PTZ00235 DNA polymerase epsilo 77.2 17 0.00036 35.6 9.1 82 55-140 25-122 (291)
125 PF13258 DUF4049: Domain of un 74.9 4.3 9.3E-05 38.2 4.3 46 94-139 86-139 (318)
126 PRK09418 bifunctional 2',3'-cy 72.4 5 0.00011 44.5 4.8 68 57-139 39-141 (780)
127 PTZ00422 glideosome-associated 71.7 6.3 0.00014 40.2 5.0 74 57-139 26-108 (394)
128 KOG1378 Purple acid phosphatas 67.4 9.1 0.0002 39.5 5.1 38 294-333 323-360 (452)
129 KOG2310 DNA repair exonuclease 63.5 19 0.0004 38.1 6.4 61 54-122 10-82 (646)
130 TIGR01854 lipid_A_lpxH UDP-2,3 57.5 28 0.00062 32.3 6.2 54 293-352 175-230 (231)
131 PF06874 FBPase_2: Firmicute f 55.4 10 0.00023 40.6 3.1 43 93-143 185-227 (640)
132 cd07400 MPP_YydB Bacillus subt 55.2 21 0.00046 30.1 4.6 40 294-334 104-144 (144)
133 COG2908 Uncharacterized protei 54.8 32 0.00069 32.6 5.9 48 303-358 186-233 (237)
134 KOG0376 Serine-threonine phosp 50.5 5.1 0.00011 41.4 -0.0 74 59-144 47-120 (476)
135 TIGR03767 P_acnes_RR metalloph 50.5 58 0.0012 34.2 7.5 68 292-361 368-444 (496)
136 COG3207 DIT1 Pyoverdine/dityro 38.6 44 0.00095 32.2 4.1 42 53-102 101-156 (330)
137 KOG3818 DNA polymerase epsilon 36.2 2.2E+02 0.0049 29.6 8.9 78 57-140 282-369 (525)
138 COG4320 Uncharacterized protei 34.9 25 0.00054 34.8 1.9 57 51-122 50-109 (410)
139 COG1692 Calcineurin-like phosp 29.6 1.3E+02 0.0027 28.9 5.6 67 58-139 1-70 (266)
140 PF12641 Flavodoxin_3: Flavodo 29.3 2.5E+02 0.0055 24.7 7.4 60 61-120 2-66 (160)
141 PF00185 OTCace: Aspartate/orn 29.0 2.2E+02 0.0047 24.9 6.9 63 56-133 1-64 (158)
142 PRK10413 hydrogenase 2 accesso 28.3 36 0.00079 26.8 1.5 13 227-239 43-55 (82)
143 PRK10409 hydrogenase assembly 26.8 36 0.00078 27.3 1.3 13 227-239 42-54 (90)
144 PF09587 PGA_cap: Bacterial ca 25.6 1.9E+02 0.0041 27.2 6.3 27 304-331 216-242 (250)
145 cd07406 MPP_CG11883_N Drosophi 24.4 1.6E+02 0.0034 27.9 5.5 54 301-359 192-245 (257)
146 cd07408 MPP_SA0022_N Staphyloc 23.3 1.7E+02 0.0037 27.5 5.5 42 302-344 199-240 (257)
147 cd07403 MPP_TTHA0053 Thermus t 23.1 1.4E+02 0.0031 25.0 4.4 22 295-317 83-104 (129)
148 COG3855 Fbp Uncharacterized pr 22.5 39 0.00085 35.1 0.9 47 292-338 518-567 (648)
149 cd07381 MPP_CapA CapA and rela 22.0 2.3E+02 0.0049 26.3 6.0 26 303-329 206-231 (239)
150 cd07410 MPP_CpdB_N Escherichia 21.3 2.4E+02 0.0051 26.8 6.1 66 59-139 2-94 (277)
151 PF01455 HupF_HypC: HupF/HypC 21.3 45 0.00098 25.2 0.9 13 227-239 38-50 (68)
152 PF08321 PPP5: PPP5 TPR repeat 20.4 68 0.0015 25.9 1.8 28 10-38 43-72 (95)
No 1
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=100.00 E-value=2.2e-36 Score=280.12 Aligned_cols=205 Identities=45% Similarity=0.814 Sum_probs=157.5
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcchh
Q 041373 61 IAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIM 140 (395)
Q Consensus 61 ~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE~~ 140 (395)
+||||||||+++|.++|+.+++.+....|..+.+++|++||+||||+++.+|+++++++...+.+.++++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 58999999999999999999998888889999999999999999999999999999999988888899999999999999
Q ss_pred hhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHHHHh
Q 041373 141 NIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFL 220 (395)
Q Consensus 141 ~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~L 220 (395)
++.+.++|..+.....+.. + .. ....+.+....+.+||
T Consensus 81 ~l~~~~~~~~~~~~~~~~~---~--------------------------------------~~-~~~~~~~~~~~~~~~L 118 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGG---L--------------------------------------AM-RRRELFSPGGELGRWL 118 (208)
T ss_pred HHcchhccCChhHHHHHHh---h--------------------------------------hh-hHHHhcCCccHHHHHH
Confidence 9986555544321111100 0 00 0011112224567999
Q ss_pred hcCceEEEeCCEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccchhhhcch--HHHHHH
Q 041373 221 SENTTVLVVGDSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKCDC--SALEHA 298 (395)
Q Consensus 221 ~~lP~~~~~~~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~~~~~~~--~~l~~~ 298 (395)
+++|+++.+++++|||||+.| +|.|.+........| ..+.+.
T Consensus 119 ~~lP~~~~~~~~~fvHag~~~------------------------------------~w~r~y~~~~~~~~~~~~~~~~~ 162 (208)
T cd07425 119 RSKPVIVKVNDTLFVHGGLGP------------------------------------LWYRGYSKETSDKECAAAHLDKV 162 (208)
T ss_pred HhCCeEEEECCEEEEeCCcHH------------------------------------HHhhHhhhhhhhccchHHHHHHH
Confidence 999999999999999999733 244443332112222 256667
Q ss_pred HhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCCcce
Q 041373 299 LATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPE 344 (395)
Q Consensus 299 L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~lt 344 (395)
|+.+ +.+++|+||||++.+....|++++|.||||++.++++|.+.
T Consensus 163 l~~~-~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~~~~~~~~~~~ 207 (208)
T cd07425 163 LERL-GAKRMVVGHTPQEGGIVTFCGGKVIRIDVGMSKGVYGGPLE 207 (208)
T ss_pred HHHc-CCCeEEEcCeeeecCceEEECCEEEEEeCCcchhhcCCCCC
Confidence 7775 78999999999997544589999999999999999988764
No 2
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=100.00 E-value=2.4e-35 Score=279.77 Aligned_cols=237 Identities=15% Similarity=0.129 Sum_probs=155.5
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCC-CCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCC
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGSDQWT-GGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGN 136 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~-~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GN 136 (395)
||++||||||||++.|.++|+++++...++.|. +..+++||+||+|||||+|.+||++++++. .+.++++|+||
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~-----~~~~~~~l~GN 75 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV-----EKKAAYYVPGN 75 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh-----hCCCEEEEeCc
Confidence 579999999999999999999998864333333 345789999999999999999999999885 34589999999
Q ss_pred cchhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHH
Q 041373 137 HEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIA 216 (395)
Q Consensus 137 HE~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~ 216 (395)
||.|+++. .... ..|+.+|+..|..++.. .+.. ....+. +.+
T Consensus 76 HE~~~l~~----~~~~--------~~~~~~gg~~tl~~~~~---------~~~~-----------~~~~~~------~~~ 117 (245)
T PRK13625 76 HCNKLYRF----FLGR--------NVTIAHGLETTVAEYEA---------LPSH-----------KQNMIK------EKF 117 (245)
T ss_pred cHHHHHHH----HhCC--------CccccchhHhHHHHHhc---------cChh-----------hHHHHH------HHH
Confidence 99998872 2111 13666666544433210 0000 000011 246
Q ss_pred HHHhhcCceEEEe--CCEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccchhhhcchHH
Q 041373 217 RRFLSENTTVLVV--GDSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKCDCSA 294 (395)
Q Consensus 217 ~~~L~~lP~~~~~--~~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~~~~~~~~~ 294 (395)
.+|++++|+++.+ ++++|||||+.|.....+...+.. ...|- ..... ......|.|..+.
T Consensus 118 ~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~~~~~~~~~-~~l~~--~~~~~------~~~~~~~~~~~~~--------- 179 (245)
T PRK13625 118 ITLYEQAPLYHILDEGRLVVAHAGIRQDYIGRQDKKVQT-FVLYG--DITGE------KHPDGSPVRRDWA--------- 179 (245)
T ss_pred HHHHHhCCceEEEeCCCEEEEECCCChHhcccchhhhhh-HHhhc--cccCC------cCCCCCeeeeccc---------
Confidence 7899999999877 679999999988643223322222 22231 00000 0122334443221
Q ss_pred HHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCCcceEEEEeCCCcEEEEecCCcccccC
Q 041373 295 LEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEINGNSELLVLTANPLYQNKN 367 (395)
Q Consensus 295 l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~lt~L~I~~~~~~~v~~~~~~~~~~~ 367 (395)
....+.+.||+||||+.. . ... ++.|+|||||++ +|+|||+++++ +++..+.+...|...+
T Consensus 180 -----~~~~g~~~vV~GHtp~~~-~-~~~-~~~i~IDtGa~~---gG~Ltal~l~~-~~~~~v~~~~~~~~~~ 240 (245)
T PRK13625 180 -----KEYKGTAWIVYGHTPVKE-P-RFV-NHTVNIDTGCVF---GGRLTALRYPE-METVSVPSSLPFVPEK 240 (245)
T ss_pred -----hhcCCCcEEEECCCCCcc-c-eec-CCeEEEECcCcc---CCEEEEEECCC-CcEEEEECcccccccc
Confidence 112366789999999984 2 233 446999999988 79999999996 5666666665555433
No 3
>PHA02239 putative protein phosphatase
Probab=100.00 E-value=1.2e-34 Score=272.83 Aligned_cols=219 Identities=16% Similarity=0.193 Sum_probs=148.3
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCc
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNH 137 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNH 137 (395)
|++++|||||||++.|.++|+.+..... +.+.+||+|||||||++|.++++.++++.. .+.++++|+|||
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~------~~d~li~lGD~iDrG~~s~~v~~~l~~~~~----~~~~~~~l~GNH 70 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERK------PEETIVFLGDYVDRGKRSKDVVNYIFDLMS----NDDNVVTLLGNH 70 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCC------CCCEEEEecCcCCCCCChHHHHHHHHHHhh----cCCCeEEEECCc
Confidence 6899999999999999999988743211 124799999999999999999999999753 355899999999
Q ss_pred chhhhhhhhccccccchhhhhhh-hhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHh--CCCch
Q 041373 138 EIMNIEADFRYATEMGLKEFEDW-ANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAAL--RPDGP 214 (395)
Q Consensus 138 E~~~l~~~~~y~~~~~~~~~~~~-~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~p~~~ 214 (395)
|.|+++.. .++. ....+ ..|+.+||..|..|||+......... +..+.. +....+.+.+.+. .+..+
T Consensus 71 E~~~l~~~---~~~~---~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~ 140 (235)
T PHA02239 71 DDEFYNIM---ENVD---RLSIYDIEWLSRYCIETLNSYGVSTVTLKYSS-VEENLR---NNYDFIKSELKKLKESDDYR 140 (235)
T ss_pred HHHHHHHH---hCch---hcccchHHHHHcCCHHHHHHcCCCCccchhhH-HHHHHH---HhhhhhhhhhhhcccchhhH
Confidence 99998731 1211 11112 26999999999999986532110000 000000 0000111111111 11224
Q ss_pred HHHHHhhcCceEEEeCCEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccchhhhcchHH
Q 041373 215 IARRFLSENTTVLVVGDSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKCDCSA 294 (395)
Q Consensus 215 ~~~~~L~~lP~~~~~~~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~~~~~~~~~ 294 (395)
.+..|+++||++++.++++|||||+.|. .++++|+.+.. +|.|.+..
T Consensus 141 ~~~~fl~~lp~~~~~~~~ifVHAGi~p~---~~~~~q~~~~l---------------------lWiR~f~~--------- 187 (235)
T PHA02239 141 KFKILMVNCRKYYKEDKYIFSHSGGVSW---KPVEEQTIDQL---------------------IWSRDFQP--------- 187 (235)
T ss_pred HHHHHHHhCcceEEECCEEEEeCCCCCC---CChhhCCHhHe---------------------EEecccCC---------
Confidence 6788999999999999999999999987 77888766544 45554211
Q ss_pred HHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccc
Q 041373 295 LEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRG 337 (395)
Q Consensus 295 l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g 337 (395)
....++||+||||+..+.... .++.|+|||||++|
T Consensus 188 -------~~~g~~vV~GHTp~~~~~~~~-~~~~I~IDtGa~~g 222 (235)
T PHA02239 188 -------RKDGFTYVCGHTPTDSGEVEI-NGDMLMCDVGAVFR 222 (235)
T ss_pred -------CCCCcEEEECCCCCCCCcccc-cCCEEEeecCcccc
Confidence 124689999999997533323 34469999999985
No 4
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=100.00 E-value=1.8e-34 Score=269.86 Aligned_cols=218 Identities=17% Similarity=0.180 Sum_probs=137.6
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcchh
Q 041373 61 IAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIM 140 (395)
Q Consensus 61 ~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE~~ 140 (395)
+||||||||+++|.++|+++++......|..+.+++||+||||||||+|.+||++++++.. +.++++|+||||.|
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~-----~~~~~~l~GNHE~~ 76 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD-----AGHALAVMGNHEFN 76 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc-----CCCEEEEEccCcHH
Confidence 7999999999999999999987654444444567899999999999999999999999853 34799999999999
Q ss_pred hhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHHHHh
Q 041373 141 NIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFL 220 (395)
Q Consensus 141 ~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~L 220 (395)
++. |.+... ....|++.++...... .....+.+.......+.+.+||
T Consensus 77 ll~----~~~~~~-----~~~~w~~~~~~~~~~~------------------------~~~~l~~~~~~~~~~~~~~~~l 123 (222)
T cd07413 77 AIA----WHTKDP-----SGGEWLRAHSKKNLRQ------------------------HQAFLEQFREHSEEHKDWLEWF 123 (222)
T ss_pred HHH----hhhCCc-----ccchhhhcCCCccccc------------------------HHHHHHHHhccchhHHHHHHHH
Confidence 887 332110 0124665433210000 0001111110011124678999
Q ss_pred hcCceEEEeCCEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccchhhhcchHHHHHHHh
Q 041373 221 SENTTVLVVGDSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKCDCSALEHALA 300 (395)
Q Consensus 221 ~~lP~~~~~~~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~~~~~~~~~l~~~L~ 300 (395)
+++|+++..++++|||||+.+. ..|.+.........+. .....|.+.. .. .+
T Consensus 124 ~~lP~~~~~~~~~~VHAg~~~~-------------l~~~~~~~~~~~~~~~--~~~~~~~~~~-~~----------~~-- 175 (222)
T cd07413 124 KTLPLFLDLGGVRVVHACWDET-------------LLKGPEIALPEGHSFV--DKDGIVRDNI-RV----------KW-- 175 (222)
T ss_pred hcCCcEEEECCEEEEECCcCHh-------------hccCCCcCCCCCceee--cCCCcccccc-ch----------hh--
Confidence 9999999999999999997522 2233221100000000 0000111110 00 00
Q ss_pred cCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCCcceEEEEeCC
Q 041373 301 TIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEINGN 351 (395)
Q Consensus 301 ~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~lt~L~I~~~ 351 (395)
-.+.||+||||+..+-+... ++.|+|||||++ +|+|||++|+++
T Consensus 176 ---~~~~Vv~GHt~~~~~~~~~~-~~~i~iDTGA~~---~G~Lta~~~~~~ 219 (222)
T cd07413 176 ---WGKPVFVGHYWLNGEPAPLN-PNVACLDYSAAK---GGKLVAYRWDGE 219 (222)
T ss_pred ---cCCCEEEecCCCCCCCcccc-CCEEEEeccccc---CCeeEEEEcCCc
Confidence 13789999999963212333 446999999998 799999999863
No 5
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=100.00 E-value=7.8e-34 Score=270.92 Aligned_cols=239 Identities=22% Similarity=0.225 Sum_probs=161.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCC-eEEEeCCC
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGG-KFITMNGN 136 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~-~v~~l~GN 136 (395)
+++++||||||+++.|+++|+.+...... .....+.+|||||||||||+|.+|+++|++++.. ++. ++++|+||
T Consensus 2 ~~iyaIGDIHG~~d~L~~lL~~I~~d~~~--~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~---~~~~~vv~LrGN 76 (304)
T cd07421 2 RVVICVGDIHGYISKLNNLWLNLQSALGP--SDFASALVIFLGDYCDRGPETRKVIDFLISLPEK---HPKQRHVFLCGN 76 (304)
T ss_pred ceEEEEEeccCCHHHHHHHHHHhhhhcCc--CcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhc---ccccceEEEecC
Confidence 47999999999999999999876432110 1122457999999999999999999999998754 333 58899999
Q ss_pred cchhhhhhhhccccccchhhh-------------hhhh-------------hhh------------------hcCccccc
Q 041373 137 HEIMNIEADFRYATEMGLKEF-------------EDWA-------------NWY------------------CIGNKMKS 172 (395)
Q Consensus 137 HE~~~l~~~~~y~~~~~~~~~-------------~~~~-------------~w~------------------~~g~~~~~ 172 (395)
||.|++...-....+.....| ..|. .|. ..|+..|.
T Consensus 77 HE~~~l~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl 156 (304)
T cd07421 77 HDFAFAAFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTF 156 (304)
T ss_pred ChHHHHhHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHH
Confidence 999988731100111001111 1121 576 67888888
Q ss_pred cccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHHHHhhcCceEEEeCCE-------------EEEecCC
Q 041373 173 LCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVGDS-------------VFVHGGL 239 (395)
Q Consensus 173 ~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~L~~lP~~~~~~~~-------------lfvHAGl 239 (395)
.|||+... .+.+.+..| +.|++||++||++++.+++ +|||||+
T Consensus 157 ~SYGv~~~----------------------~~~l~~avP--~~H~~fl~~l~~~~~~~~~~~~~~~g~~~~~lifVHAGl 212 (304)
T cd07421 157 ESYGVPHG----------------------SSDLIKAVP--EEHKKFLRNLVWVHEEDDVCIETEEGLKHCKLIAVHAGL 212 (304)
T ss_pred HHcCCCcc----------------------hHHHHHhCC--HHHHHHHHhCCceEEeCcccccccccccccceEEEEccc
Confidence 88887421 223455667 4899999999999999998 9999999
Q ss_pred CCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccchhhhcchHHHHHHHhcCCCCcEEEEcccCCCCCc
Q 041373 240 LKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKCDCSALEHALATIPGVKRMIMGHTIQEKGI 319 (395)
Q Consensus 240 ~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~~~~~~~~~l~~~L~~~~g~~~vV~GHT~~~~gi 319 (395)
.|. .+|++|.+..+ ... ...| ...++|.|........ .+ .+..++||+|||...
T Consensus 213 rPg---~pLe~Q~~~L~----~~d-~~~p-----~~~~l~~R~~f~~~~~--------~~--~~~~~~VVhGHt~~~--- 266 (304)
T cd07421 213 EKS---NSVEEQLKLLR----TKD-TSIP-----KIAPLSGRKNVWNIPQ--------EL--ADKKTIVVSGHHGKL--- 266 (304)
T ss_pred CCC---CChHHhhhhhh----ccc-cccc-----cccccccchhhhcCcc--------cc--cCCCeEEEECCCCCc---
Confidence 999 89999966422 111 1122 2478888874322000 01 123689999999443
Q ss_pred ccccCCcEEEEecCCccccCCCcceEEEEeCCCcEEEEe
Q 041373 320 NAVCDNRAIRIDVGLSRGCYDGLPEVLEINGNSELLVLT 358 (395)
Q Consensus 320 ~~~~~~~~i~IDtG~~~g~~~G~lt~L~I~~~~~~~v~~ 358 (395)
...++| |.||||+++ +|+|+|+.|-. ..++++
T Consensus 267 -~~~~~R-i~iDtGa~~---~~~l~aa~vlp--~~~~~~ 298 (304)
T cd07421 267 -HIDGLR-LIIDEGGGF---DDRPIAAIVLP--SKEIIR 298 (304)
T ss_pred -eecCCE-EEEECCCCc---CCceeEEEEec--cceeEe
Confidence 233454 999999998 78877766653 344444
No 6
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=100.00 E-value=5.6e-32 Score=255.05 Aligned_cols=229 Identities=19% Similarity=0.218 Sum_probs=141.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCC-CCCCC-CCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCC
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGS-DQWTG-GTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNG 135 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~-~~w~~-~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~G 135 (395)
||+.||||||||+.+|+++|+.+++..++ +.+.+ +.+++|||||+|||||+|.+||++|++++. +.++++|+|
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~-----~~~~~~v~G 75 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA-----AGAALCVPG 75 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh-----CCcEEEEEC
Confidence 58999999999999999999999887443 12222 346899999999999999999999999853 347899999
Q ss_pred CcchhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchH
Q 041373 136 NHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPI 215 (395)
Q Consensus 136 NHE~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~ 215 (395)
|||.|+++. .... ..|..+|+..+..++. .....+. +.
T Consensus 76 NHE~~l~~~----~~~~--------~~~~~~~~~~t~~~~~------------------------~~~~~~~------~~ 113 (234)
T cd07423 76 NHDNKLYRK----LQGR--------NVKITHGLEETVAQLE------------------------AESEEFK------EE 113 (234)
T ss_pred CcHHHHHHH----hcCC--------CccccCcccchHHHHh------------------------hccHHHH------HH
Confidence 999998873 1110 0112222211111000 0000010 24
Q ss_pred HHHHhhcCceEEEeC--CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccchhhhcchH
Q 041373 216 ARRFLSENTTVLVVG--DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKCDCS 293 (395)
Q Consensus 216 ~~~~L~~lP~~~~~~--~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~~~~~~~~ 293 (395)
..+||++||++++++ +++|||||+++.......+.+.. ...| ...... ......|.|..
T Consensus 114 ~~~~l~~lP~~~~~~~~~~~~vHag~~~~~~~~~~~~~~~-~~~~--~~~~~~------~~~~~~~~~~~---------- 174 (234)
T cd07423 114 VIEFYESLPSHLVLDEGKLVVAHAGIKEEMIGRDSKRVRS-FALY--GDTTGE------TDEFGLPVRRD---------- 174 (234)
T ss_pred HHHHHHhCCcEEEeCCCcEEEEeCCCChHhccccchhhee-eeec--ccccCC------cCCCCCccchh----------
Confidence 678999999999865 69999999876521111100000 0000 000000 00011222221
Q ss_pred HHHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCCcceEEEEeCCCcEEEEecCCcc
Q 041373 294 ALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEINGNSELLVLTANPLY 363 (395)
Q Consensus 294 ~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~lt~L~I~~~~~~~v~~~~~~~ 363 (395)
+...+.+.+.+|+||||+.. + ...+ +.+.|||||++ +|+|||+++++ +++..++....|
T Consensus 175 ----~~~~~~~~~~vv~GHt~~~~-~-~~~~-~~i~IDtGav~---gG~Lt~l~~~~-~~~~~~~~~~~~ 233 (234)
T cd07423 175 ----WAKEYRGDALVVYGHTPVPE-P-RWLN-NTINIDTGCVF---GGKLTALRYPE-REIVSVPARQVY 233 (234)
T ss_pred ----hHhhCCCCeEEEECCCCCcc-c-eEeC-CEEEEECCCCC---CCcceEEECCC-CcEEEeeccccc
Confidence 11223467899999999984 3 2334 46999999988 79999999985 556555555433
No 7
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=100.00 E-value=4.6e-32 Score=253.01 Aligned_cols=201 Identities=23% Similarity=0.327 Sum_probs=135.3
Q ss_pred CCCCCeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEe
Q 041373 54 LPRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITM 133 (395)
Q Consensus 54 ~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l 133 (395)
....+|++||||||||+++|+++|+.+++.+.. +++||+||+|||||+|.+||+++++. ++++|
T Consensus 13 ~~~~~ri~vigDIHG~~~~L~~lL~~i~~~~~~-------D~li~lGDlvDrGp~s~~vl~~l~~~---------~~~~v 76 (218)
T PRK11439 13 GHQWRHIWLVGDIHGCFEQLMRKLRHCRFDPWR-------DLLISVGDLIDRGPQSLRCLQLLEEH---------WVRAV 76 (218)
T ss_pred CCCCCeEEEEEcccCCHHHHHHHHHhcCCCccc-------CEEEEcCcccCCCcCHHHHHHHHHcC---------CceEe
Confidence 344569999999999999999999998775333 37999999999999999999999764 57899
Q ss_pred CCCcchhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCc
Q 041373 134 NGNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDG 213 (395)
Q Consensus 134 ~GNHE~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~ 213 (395)
+||||.|+++. .... ....|..+|+.. ... +... .++..
T Consensus 77 ~GNHE~~~l~~----~~~~------~~~~w~~~gg~~-~~~------------l~~~-----------~~~~~------- 115 (218)
T PRK11439 77 RGNHEQMALDA----LASQ------QMSLWLMNGGDW-FIA------------LTDN-----------QQKQA------- 115 (218)
T ss_pred eCchHHHHHHH----HHCC------ccchhhhCCChh-hhh------------cchh-----------hhHHH-------
Confidence 99999999873 2211 112577777643 100 0000 00011
Q ss_pred hHHHHHhhcCceEEEeC----CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccchhhh
Q 041373 214 PIARRFLSENTTVLVVG----DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKK 289 (395)
Q Consensus 214 ~~~~~~L~~lP~~~~~~----~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~~~~ 289 (395)
..+.+||++||+++++. +++|||||+ |. ...+ |.. +. .....+|.|........
T Consensus 116 ~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~-p~---~~~~--------~~~-------~~---~~~~~~w~r~~~~~~~~ 173 (218)
T PRK11439 116 KTLLEKCQRLPFILEVHCRTGKHVIAHADY-PA---DVYE--------WQK-------DV---DLHQVLWSRSRLGERQK 173 (218)
T ss_pred HHHHHHHhcCCcEEEeeccCCCEEEEeCCC-CC---Cchh--------hhc-------cC---CccceEEcChhhhhccc
Confidence 24568999999998753 699999998 43 1111 111 00 12346787754321000
Q ss_pred cchHHHHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCCcceEEEE
Q 041373 290 CDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEI 348 (395)
Q Consensus 290 ~~~~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~lt~L~I 348 (395)
. ..+.+.+.||+||||++. + ...++ .+.|||||++ +|+||++++
T Consensus 174 -~--------~~~~~~~~vv~GHT~~~~-~-~~~~~-~i~IDtGav~---gg~Lt~l~~ 217 (218)
T PRK11439 174 -G--------QGITGADHFWFGHTPLRH-R-VDIGN-LHYIDTGAVF---GGELTLVQL 217 (218)
T ss_pred -c--------ccccCCCEEEECCccCCC-c-cccCC-EEEEECCCCC---CCeeEEEEc
Confidence 0 012356789999999984 3 23344 6999999988 799999987
No 8
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=100.00 E-value=8.8e-32 Score=258.50 Aligned_cols=233 Identities=18% Similarity=0.271 Sum_probs=144.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCc
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNH 137 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNH 137 (395)
|+++||||||||+++|+++|+++++.+.. +++||+||+|||||+|.+|+++++++. .++++|+|||
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~-------D~li~lGDlVdrGp~s~~vl~~l~~l~-------~~~~~VlGNH 66 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAK-------DTLWLVGDLVNRGPDSLEVLRFVKSLG-------DSAVTVLGNH 66 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCC-------CEEEEeCCccCCCcCHHHHHHHHHhcC-------CCeEEEecCh
Confidence 67999999999999999999998875443 379999999999999999999999872 3689999999
Q ss_pred chhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHH
Q 041373 138 EIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIAR 217 (395)
Q Consensus 138 E~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~ 217 (395)
|.+++...+..... .+. ..+.+.+. .+..+.+.
T Consensus 67 D~~ll~~~~g~~~~---------------~~~------------------------------~~l~~~l~--~~~~~~~~ 99 (275)
T PRK00166 67 DLHLLAVAAGIKRN---------------KKK------------------------------DTLDPILE--APDRDELL 99 (275)
T ss_pred hHHHHHhhcCCccc---------------cch------------------------------hHHHHHHc--cccHHHHH
Confidence 99887631100000 000 00111111 12224678
Q ss_pred HHhhcCceEEE--eCCEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccch---------
Q 041373 218 RFLSENTTVLV--VGDSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDE--------- 286 (395)
Q Consensus 218 ~~L~~lP~~~~--~~~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~--------- 286 (395)
+||+++|++++ .++++|||||++|.+.....-....++...+++.........+++...-.|.......
T Consensus 100 ~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my~~~p~~W~~~l~~~~r~r~~~n~ 179 (275)
T PRK00166 100 DWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMYGNEPDRWSPDLTGLERLRYIINA 179 (275)
T ss_pred HHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhcCCCcCccCcccCchHHHHHHHHH
Confidence 99999999999 4579999999999842211112333444444432110000001122222454322110
Q ss_pred -----------hhhcch--------HHHHHHHh---cCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCCcce
Q 041373 287 -----------EKKCDC--------SALEHALA---TIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPE 344 (395)
Q Consensus 287 -----------~~~~~~--------~~l~~~L~---~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~lt 344 (395)
..++.+ +.+..|+. +......||+|||+...|... ..++++|||||++ +|+||
T Consensus 180 ~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~G~~~--~~~~~~LDtGcvw---gg~Lt 254 (275)
T PRK00166 180 FTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALEGLTT--PPNIIALDTGCVW---GGKLT 254 (275)
T ss_pred HhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccCCccC--CCCeEEeeccccc---CCeEE
Confidence 000000 01111211 122356899999999866543 5668999999999 79999
Q ss_pred EEEEeCCCcEEEE
Q 041373 345 VLEINGNSELLVL 357 (395)
Q Consensus 345 ~L~I~~~~~~~v~ 357 (395)
|++|++ .++..+
T Consensus 255 a~~l~~-~~~~~~ 266 (275)
T PRK00166 255 ALRLED-KQIFQV 266 (275)
T ss_pred EEEeCC-CcEEEE
Confidence 999995 444333
No 9
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.98 E-value=3.2e-32 Score=259.65 Aligned_cols=227 Identities=19% Similarity=0.242 Sum_probs=147.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCc
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNH 137 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNH 137 (395)
|++|||||||||+++|+++|+++++.+..+ ++||+||+|||||+|.+|+++++++. .++++|+|||
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D-------~l~~lGDlVdRGP~slevL~~l~~l~-------~~~~~VlGNH 66 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQD-------TLWLTGDLVARGPGSLEVLRYVKSLG-------DAVRLVLGNH 66 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCC-------EEEEeCCccCCCCCHHHHHHHHHhcC-------CCeEEEEChh
Confidence 578999999999999999999998765444 79999999999999999999999873 3678999999
Q ss_pred chhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHH
Q 041373 138 EIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIAR 217 (395)
Q Consensus 138 E~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~ 217 (395)
|.+++.....+... . +. +.+.+.+. .+..++..
T Consensus 67 D~~lL~~~~g~~~~---------------------------~--------~~----------d~l~~~l~--a~~~~ell 99 (279)
T TIGR00668 67 DLHLLAVFAGISRN---------------------------K--------PK----------DRLDPLLE--APDADELL 99 (279)
T ss_pred HHHHHHHhcCCCcc---------------------------C--------ch----------HHHHHHHH--ccCHHHHH
Confidence 99888731110000 0 00 11111222 23335788
Q ss_pred HHhhcCceEEEeC--CEEEEecCCCCCccccChhh---hhHHHHHHHhcccCCCCCCCcCCCCcccccccccc-------
Q 041373 218 RFLSENTTVLVVG--DSVFVHGGLLKQHVEYGLER---INREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSD------- 285 (395)
Q Consensus 218 ~~L~~lP~~~~~~--~~lfvHAGl~p~~~~~~le~---~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~------- 285 (395)
+||+++|+++... ++++||||++|. .+++. ...++...+++......-..+++.....|...-..
T Consensus 100 ~wLr~lPl~i~~~~~~~~lVHAGi~P~---w~l~~a~~~a~eve~~L~~~~~~~fl~~mygn~p~~W~~~l~g~~r~r~i 176 (279)
T TIGR00668 100 NWLRRQPLLQHDEEKKLVMAHAGITPQ---WDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMPNRWSPELQGLARLRFI 176 (279)
T ss_pred HHHHcCCcEEEeCCCCEEEEecCCCCC---CcHHHHHHHHHHHHHHHcCCCHHHHHHHhhCCCCccCCCCCchHHHHHHH
Confidence 9999999999765 599999999998 45443 33455554443211000000122233345432110
Q ss_pred -------------hhhhcch--------HHHHHHHh---cCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCC
Q 041373 286 -------------EEKKCDC--------SALEHALA---TIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDG 341 (395)
Q Consensus 286 -------------~~~~~~~--------~~l~~~L~---~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G 341 (395)
+..++.+ +.+..++. +......||+||+....|.. ...+++++||||++ ||
T Consensus 177 ~n~~TRmR~c~~~g~ld~~~k~~~~~~p~~~~PWf~~~~~~~~~~~ivfGHWaaL~g~~--~~~~~~~lDtGCvW---Gg 251 (279)
T TIGR00668 177 INAFTRMRFCFPNGQLDMYSKESPEDAPAPLKPWFAIPGPVYEEYSIAFGHWASLEGEG--TPEGIYALDTGCCW---GG 251 (279)
T ss_pred HHHHhhheeeCCCCCCcccccCCcccCCCCCCCcccCCCccCCCCcEEEeehhhccCCC--CCCCeEEccccccc---Cc
Confidence 0111111 12333443 22345689999999976643 34568999999999 79
Q ss_pred cceEEEEeCCCcE
Q 041373 342 LPEVLEINGNSEL 354 (395)
Q Consensus 342 ~lt~L~I~~~~~~ 354 (395)
+||++++++ .+.
T Consensus 252 ~Lta~~l~~-~~~ 263 (279)
T TIGR00668 252 RLTCLRWED-KQY 263 (279)
T ss_pred ceEEEEecC-CCE
Confidence 999999996 443
No 10
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=99.97 E-value=1.4e-30 Score=254.13 Aligned_cols=276 Identities=17% Similarity=0.186 Sum_probs=179.8
Q ss_pred HHHHHHHHHHhhhcCCccCCCC---------CCCCCCCCCCCCCCCCCCCeEEEEecCCCCHHHHHHHHHHhCCCCCCCC
Q 041373 18 LSSFVDTFVDFTVSGGLFLPNP---------DPKTSQNVREPTTRLPRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQ 88 (395)
Q Consensus 18 ~~~f~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~ 88 (395)
...++|.+++.+..+ ..++.. .+....++.+.....+...+++||||||||+.+|.++|+..|+++..
T Consensus 3 ~~~~~~~~i~~~~~~-~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~-- 79 (321)
T cd07420 3 TKDHIDALIEAFKEK-QLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPE-- 79 (321)
T ss_pred CHHHHHHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCcc--
Confidence 446678888877665 334431 01123333333334445679999999999999999999998876543
Q ss_pred CCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcchhhhhhhhccccccchhhhhhhhhhhhcCc
Q 041373 89 WTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIMNIEADFRYATEMGLKEFEDWANWYCIGN 168 (395)
Q Consensus 89 w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~ 168 (395)
++++|||||||||++|+||+.+|+.++.. +|++++++|||||.+.++..+.|..+ .
T Consensus 80 -----~~~lFLGDyVDRG~~s~Evl~ll~~lk~~---~p~~v~llRGNHE~~~~~~~yGf~~e--~-------------- 135 (321)
T cd07420 80 -----NPYVFNGDFVDRGKRSIEILIILFAFFLV---YPNEVHLNRGNHEDHIMNLRYGFTKE--V-------------- 135 (321)
T ss_pred -----ceEEEeccccCCCCCcHHHHHHHHHHhhc---CCCcEEEecCchhhhhhhhhcChHHH--H--------------
Confidence 36999999999999999999999999875 88999999999999988754333210 0
Q ss_pred cccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHHHHhhcCceEEEeCC-EEEEecCCCCCccccC
Q 041373 169 KMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVGD-SVFVHGGLLKQHVEYG 247 (395)
Q Consensus 169 ~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~L~~lP~~~~~~~-~lfvHAGl~p~~~~~~ 247 (395)
...|+- ...+.| ....++++.||++..+++ +++|||||+|. ..
T Consensus 136 ---~~~y~~----------------~~~~l~--------------~~~~~~F~~LPlaaii~~~i~cvHGGi~~~---~~ 179 (321)
T cd07420 136 ---MSKYKL----------------HGKKIL--------------RLLEDVFSWLPLATIIDNKILVVHGGISDS---TD 179 (321)
T ss_pred ---HHHhCc----------------cHHHHH--------------HHHHHHHHhCCceEEEcCCEEEEeCCCCCc---cC
Confidence 000100 000001 134578899999999875 78899999864 44
Q ss_pred hhhhhHHHHHH----HhcccCC---------CCC------CCcCCCCcccccccccch----------hhhcchHHHHHH
Q 041373 248 LERINREVRDW----INGLMGK---------SAP------GYCKGRHAVVWLRKFSDE----------EKKCDCSALEHA 298 (395)
Q Consensus 248 le~~n~~~~~w----i~~~~~~---------~~p------~~~~~~~~~lW~R~~~~~----------~~~~~~~~l~~~ 298 (395)
++.++...+.- .+.+... ..| .......+++|+.+.... ...+..+.++++
T Consensus 180 l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~RG~g~~FG~~~~~~F 259 (321)
T cd07420 180 LDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNTFRGGGCYFGPDVTSKV 259 (321)
T ss_pred HHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCccCCCCCccccCHHHHHHH
Confidence 55543321100 0000000 000 000012357887753211 112456788899
Q ss_pred HhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccc-cCCCcceEEEEeCCCcEEEE
Q 041373 299 LATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRG-CYDGLPEVLEINGNSELLVL 357 (395)
Q Consensus 299 L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g-~~~G~lt~L~I~~~~~~~v~ 357 (395)
|... +.+.||+||+.+..|+....++++++|.+.+.|. ..++.-++|.|+.+....+.
T Consensus 260 l~~n-~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~f~ 318 (321)
T cd07420 260 LQKH-GLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLTPHFV 318 (321)
T ss_pred HHHC-CCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCceeEE
Confidence 9885 8999999999998898877899999999876552 13466777888865555543
No 11
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.97 E-value=1.9e-31 Score=253.61 Aligned_cols=224 Identities=19% Similarity=0.250 Sum_probs=141.9
Q ss_pred EEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcch
Q 041373 60 LIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEI 139 (395)
Q Consensus 60 i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE~ 139 (395)
++||||||||+++|+++|+++++.+..| ++||+||+|||||+|.+|+++++++. .++++|+||||.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D-------~Li~lGDlVdRGp~s~evl~~l~~l~-------~~v~~VlGNHD~ 66 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKD-------RLWLVGDLVNRGPDSLETLRFVKSLG-------DSAKTVLGNHDL 66 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCC-------EEEEecCcCCCCcCHHHHHHHHHhcC-------CCeEEEcCCchH
Confidence 4899999999999999999988765443 79999999999999999999999984 379999999999
Q ss_pred hhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHHHH
Q 041373 140 MNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRF 219 (395)
Q Consensus 140 ~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~ 219 (395)
+++........ .+.. +.+.+.+. .+..+++.+|
T Consensus 67 ~ll~~~~g~~~---------------~~~~------------------------------~t~~~~l~--~~~~~~~~~w 99 (257)
T cd07422 67 HLLAVAAGIKK---------------PKKK------------------------------DTLDDILN--APDRDELLDW 99 (257)
T ss_pred HHHHHhcCccc---------------cccH------------------------------hHHHHHHh--ccchHHHHHH
Confidence 88763110000 0000 00111111 1233567899
Q ss_pred hhcCceEEEeC--CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccc------------
Q 041373 220 LSENTTVLVVG--DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSD------------ 285 (395)
Q Consensus 220 L~~lP~~~~~~--~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~------------ 285 (395)
|+++|+++.++ +++|||||++|.+..........++...+++.........+++.....|......
T Consensus 100 Lr~lPl~~~~~~~~~l~vHAGi~p~w~~~~~~~~a~eve~~l~~~~~~~~~~~my~~~p~~W~~~l~g~~r~r~~~n~~t 179 (257)
T cd07422 100 LRHQPLLHRDPELGILMVHAGIPPQWSIEQALKLAREVEAALRGPNYREFLKNMYGNEPDRWSDDLTGIDRLRYIVNAFT 179 (257)
T ss_pred HHhCCCEEEECCccEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhhCCCCcccCcccCccHHHHHHHHHhh
Confidence 99999999998 6999999999984322222344455555543211000000112222245422110
Q ss_pred --------hhhhcchH--------HHHHHHh---cCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCCcceEE
Q 041373 286 --------EEKKCDCS--------ALEHALA---TIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVL 346 (395)
Q Consensus 286 --------~~~~~~~~--------~l~~~L~---~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~lt~L 346 (395)
+..++.|+ .+..++. +......||+||+....|.. ...+++++||||++ ||+||++
T Consensus 180 rmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~~~~--~~~~~~~lDtGcvw---G~~lta~ 254 (257)
T cd07422 180 RMRFCTPDGRLDFSSKGAPEDAPKGLKPWFELPNRKTDDYTIVFGHWAALGGKT--RPNNIIALDTGCVW---GGKLTAL 254 (257)
T ss_pred ceeeecCCCCEeecccCCcccCCCCCCCceeCCCccCCCCcEEEeecccccCcc--CCCCeEEecccccc---CCeeeEE
Confidence 00011111 1222332 12246689999999985432 24558999999999 7999999
Q ss_pred EEe
Q 041373 347 EIN 349 (395)
Q Consensus 347 ~I~ 349 (395)
+++
T Consensus 255 ~~~ 257 (257)
T cd07422 255 RLE 257 (257)
T ss_pred EeC
Confidence 874
No 12
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=99.97 E-value=1.1e-29 Score=248.28 Aligned_cols=272 Identities=16% Similarity=0.245 Sum_probs=185.5
Q ss_pred chhHHHHHHHHHHHhhhcCCccCCCCC---------CCCCCCCCCCCCCCCCCCeEEEEecCCCCHHHHHHHHHHhCCCC
Q 041373 14 VPSLLSSFVDTFVDFTVSGGLFLPNPD---------PKTSQNVREPTTRLPRVDRLIAIGDLHGDLEKSKQALRLAGLIN 84 (395)
Q Consensus 14 ~~~~~~~f~~~~~~~~~~~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~ 84 (395)
.|.+...|++.+++.+..+ ..++... .....++.......|...+++||||||||+.+|.++|+..++++
T Consensus 8 ~~~i~~~~~~~~~~~~~~~-~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~ 86 (316)
T cd07417 8 DEKVTLEFVKEMIEWFKDQ-KKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPS 86 (316)
T ss_pred CCCCCHHHHHHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCC
Confidence 4667788999999998876 4455421 12233333444455556789999999999999999999988765
Q ss_pred CCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcchhhhhhhhccccccchhhhhhhhhhh
Q 041373 85 GSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIMNIEADFRYATEMGLKEFEDWANWY 164 (395)
Q Consensus 85 ~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE~~~l~~~~~y~~~~~~~~~~~~~~w~ 164 (395)
.++ +++|||||||||+.|+||+.+++.++.. +|.+++++|||||.+.++..+.|..+
T Consensus 87 ~~~-------~ylFLGDyVDRG~~S~Evl~ll~~lki~---~p~~v~lLRGNHE~~~~~~~~gf~~e------------- 143 (316)
T cd07417 87 ETN-------PYLFNGDFVDRGSFSVEVILTLFAFKLL---YPNHFHLNRGNHETDNMNKMYGFEGE------------- 143 (316)
T ss_pred ccC-------eEEEEeeEecCCCChHHHHHHHHHhhhc---cCCceEEEeeccchHHHHHHhhhcch-------------
Confidence 443 6999999999999999999999999876 78899999999999877643322110
Q ss_pred hcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHHHHhhcCceEEEeC-CEEEEecCCCCCc
Q 041373 165 CIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVG-DSVFVHGGLLKQH 243 (395)
Q Consensus 165 ~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~L~~lP~~~~~~-~~lfvHAGl~p~~ 243 (395)
. ...+. ..+. ....+++..||++..++ ++++||||+++..
T Consensus 144 -----~-----------------~~k~~-------~~l~----------~~~~~~f~~LPlaaii~~~~~~vHgGi~~~~ 184 (316)
T cd07417 144 -----V-----------------KAKYN-------EQMF----------DLFSEVFNWLPLAHLINGKVLVVHGGLFSDD 184 (316)
T ss_pred -----h-----------------hhccc-------HHHH----------HHHHHHHHhchHhheeCCeEEEEccccccCC
Confidence 0 00000 0111 13457889999999886 5888999995421
Q ss_pred cccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccch---------hhhcchHHHHHHHhcCCCCcEEEEcccC
Q 041373 244 VEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDE---------EKKCDCSALEHALATIPGVKRMIMGHTI 314 (395)
Q Consensus 244 ~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~---------~~~~~~~~l~~~L~~~~g~~~vV~GHT~ 314 (395)
...+++++... ++ . ..|.. ....+++|+.+.... ...+..+.++++|... +.+.||+||+.
T Consensus 185 -~~~l~~i~~i~-r~----~--~~~~~-~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n-~l~~iiR~He~ 254 (316)
T cd07417 185 -GVTLDDIRKID-RF----R--QPPDS-GLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEEN-NLEYIIRSHEV 254 (316)
T ss_pred -CccHHHhhccc-CC----C--CCCcc-ccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHc-CCcEEEECCcc
Confidence 13455553311 11 0 11110 012467787543111 1124556888999885 89999999999
Q ss_pred CCCCcccccCCcEEEEecCCcccc--CCCcceEEEEeC-CCcEEEEec
Q 041373 315 QEKGINAVCDNRAIRIDVGLSRGC--YDGLPEVLEING-NSELLVLTA 359 (395)
Q Consensus 315 ~~~gi~~~~~~~~i~IDtG~~~g~--~~G~lt~L~I~~-~~~~~v~~~ 359 (395)
+..|+....++++++|.+.+.| | .++.-+++.|+. +....+.+-
T Consensus 255 ~~~G~~~~~~~~~~TvfSa~~Y-~~~~~N~ga~~~i~~~~~~~~~~~~ 301 (316)
T cd07417 255 KDEGYEVEHDGKCITVFSAPNY-CDQMGNKGAFIRITGSDLKPKFTQF 301 (316)
T ss_pred cceeEEEecCCeEEEEeCCccc-cCCCCcceEEEEEeCCCceeeeEec
Confidence 9889987889999999876655 4 356778888986 566655543
No 13
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.96 E-value=5.8e-29 Score=232.09 Aligned_cols=203 Identities=21% Similarity=0.337 Sum_probs=132.3
Q ss_pred CCCCeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeC
Q 041373 55 PRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMN 134 (395)
Q Consensus 55 ~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~ 134 (395)
....|++||||||||+++|+++|+.+.+.... +++|++||+|||||+|.+|++++.+. ++++|+
T Consensus 12 ~~~~ri~visDiHg~~~~l~~~l~~~~~~~~~-------d~l~~lGD~vdrG~~~~~~l~~l~~~---------~~~~v~ 75 (218)
T PRK09968 12 HHYRHIWVVGDIHGEYQLLQSRLHQLSFCPET-------DLLISVGDNIDRGPESLNVLRLLNQP---------WFISVK 75 (218)
T ss_pred CCCCeEEEEEeccCCHHHHHHHHHhcCCCCCC-------CEEEECCCCcCCCcCHHHHHHHHhhC---------CcEEEE
Confidence 34459999999999999999999988765433 37999999999999999999988642 689999
Q ss_pred CCcchhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCch
Q 041373 135 GNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGP 214 (395)
Q Consensus 135 GNHE~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~ 214 (395)
||||.|+++. .... ....|..+|+..+. + + ..+. .... .
T Consensus 76 GNHE~~~~~~----~~~~------~~~~~~~~gg~~~~-~--l----------~~~~-----------~~~~-------~ 114 (218)
T PRK09968 76 GNHEAMALDA----FETG------DGNMWLASGGDWFF-D--L----------NDSE-----------QQEA-------T 114 (218)
T ss_pred CchHHHHHHH----HhcC------ChhHHHHccCHHHh-c--C----------CHHH-----------HHHH-------H
Confidence 9999999873 2111 11357777765421 1 1 1000 0000 1
Q ss_pred HHHHHhhcCceEEEeC----CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccchhhhc
Q 041373 215 IARRFLSENTTVLVVG----DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKC 290 (395)
Q Consensus 215 ~~~~~L~~lP~~~~~~----~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~~~~~ 290 (395)
....||++||+++++. +++|||||+ |. ...... .. ......+|.|......
T Consensus 115 ~~~~~L~~LP~~~~~~~~g~~~~~vHAg~-p~---~~~~~~--------~~----------~~~~~~~w~r~~~~~~--- 169 (218)
T PRK09968 115 DLLLKFHHLPHIIEITNDNIKYVIAHADY-PG---DEYDFG--------KE----------IAESELLWPVDRVQKS--- 169 (218)
T ss_pred HHHHHHhcCCeEEEEeeCCCcEEEEeCCC-CC---chhhhc--------cc----------cchhhceeCcHHHhhC---
Confidence 3457999999999773 589999998 33 000000 00 0012345654322110
Q ss_pred chHHHHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCCcceEEEEe
Q 041373 291 DCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEIN 349 (395)
Q Consensus 291 ~~~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~lt~L~I~ 349 (395)
...+.....+.+.||+|||+.+. + ...++ .+.|||||++ +|+||++++.
T Consensus 170 ----~~~~~~~~~~~~~vv~GHTh~~~-~-~~~~~-~i~IDtGs~~---gG~Lt~~~~~ 218 (218)
T PRK09968 170 ----LNGELQQINGADYFIFGHMMFDN-I-QTFAN-QIYIDTGSPK---SGRLSFYKIK 218 (218)
T ss_pred ----ccccccccCCCCEEEECCCCcCc-c-eeECC-EEEEECCCCC---CCceeEEecC
Confidence 00011112366899999999973 3 23344 5999999988 7999999863
No 14
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=99.96 E-value=7.1e-28 Score=231.47 Aligned_cols=228 Identities=18% Similarity=0.259 Sum_probs=161.5
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCc
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNH 137 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNH 137 (395)
++++||||||||+.+|.++|+..+..+. +.+|||||+||||++|.|++.+++.++.. +|.+++++||||
T Consensus 28 ~~i~vvGDiHG~~~~l~~ll~~~~~~~~--------~~~vfLGD~VDrG~~s~e~l~~l~~lk~~---~p~~v~llrGNH 96 (271)
T smart00156 28 APVTVCGDIHGQFDDLLRLFDLNGPPPD--------TNYVFLGDYVDRGPFSIEVILLLFALKIL---YPNRVVLLRGNH 96 (271)
T ss_pred CCEEEEEeCcCCHHHHHHHHHHcCCCCC--------ceEEEeCCccCCCCChHHHHHHHHHHHhc---CCCCEEEEeccc
Confidence 5799999999999999999998876433 46999999999999999999999999886 788999999999
Q ss_pred chhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHH
Q 041373 138 EIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIAR 217 (395)
Q Consensus 138 E~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~ 217 (395)
|.+.++..+.|..+ . ...+. ..+. ....
T Consensus 97 E~~~~~~~~gf~~e--~---------------------------------~~~~~-------~~l~----------~~~~ 124 (271)
T smart00156 97 ESRSMNEIYGFYDE--C---------------------------------KRKYG-------EEIY----------EKFQ 124 (271)
T ss_pred cHHHHHHhccchhh--h---------------------------------hhhcC-------HHHH----------HHHH
Confidence 99877632221110 0 00000 0011 1356
Q ss_pred HHhhcCceEEEeC-CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccc---------h-
Q 041373 218 RFLSENTTVLVVG-DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSD---------E- 286 (395)
Q Consensus 218 ~~L~~lP~~~~~~-~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~---------~- 286 (395)
++++.||++..++ ++++||||++|.. ..+++++. +..+.. .+.. .....++|+++... +
T Consensus 125 ~~f~~LPl~aii~~~~~~vHgGi~~~~--~~l~~i~~-----i~r~~~--~~~~-~~~~dllWsDP~~~~~~~~~~~Rg~ 194 (271)
T smart00156 125 EAFSWLPLAALIDNKILCMHGGLSPDL--TTLDDIRK-----LKRPQE--PPDE-GLLIDLLWSDPDQPVDGFQPSIRGA 194 (271)
T ss_pred HHHhhChhheEEcCeEEEEecCCCCcc--CCHHHHhc-----ccCCCC--CCch-hhhhheeecCCCcccCCCccCCCCC
Confidence 7889999999997 5999999998862 34555543 111110 1100 01245777765210 0
Q ss_pred hhhcchHHHHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCcccc-CCCcceEEEEeCCCcEEEEec
Q 041373 287 EKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGC-YDGLPEVLEINGNSELLVLTA 359 (395)
Q Consensus 287 ~~~~~~~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~-~~G~lt~L~I~~~~~~~v~~~ 359 (395)
...+..+.++++|.+. +.++||+||++++.|+....++++++|.+...|.. .++.-+++.|+.+....+.+-
T Consensus 195 g~~fg~~~~~~Fl~~n-~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~~~i~~~~~~~~~~~ 267 (271)
T smart00156 195 SYYFGPDAVDEFLKKN-NLKLIIRAHQVVDDGYEFFHDRKLVTIFSAPNYCGRFGNKAAVLKVDKDLKLSFEQF 267 (271)
T ss_pred ccccCHHHHHHHHHHC-CCeEEEecCcccCCcEEEecCCcEEEEECCcccccCCCceEEEEEECCCCcEEEEEe
Confidence 1124567888999885 89999999999988998888999999998766532 356778888887777776543
No 15
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=99.96 E-value=5.5e-28 Score=236.47 Aligned_cols=244 Identities=15% Similarity=0.176 Sum_probs=162.5
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCc
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNH 137 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNH 137 (395)
.+++||||||||+++|.++|+..++.+....|......+||||||||||++|+||+.+++.++.. +|.+++++||||
T Consensus 48 ~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~---~p~~v~lLRGNH 124 (311)
T cd07419 48 APIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSLETICLLLALKVK---YPNQIHLIRGNH 124 (311)
T ss_pred CCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCChHHHHHHHHHhhhc---CCCcEEEecccc
Confidence 36899999999999999999998877543333333457999999999999999999999999875 789999999999
Q ss_pred chhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHH
Q 041373 138 EIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIAR 217 (395)
Q Consensus 138 E~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~ 217 (395)
|.+.++..+.|..+ .. ..++.. ... ...+. ....
T Consensus 125 E~~~l~~~~gf~~e-----------~~--------~~~~~~--------~~~---------~~~l~----------~~~~ 158 (311)
T cd07419 125 EDRDINALFGFREE-----------CK--------ERLGED--------PND---------GDSVW----------RRIN 158 (311)
T ss_pred chHHHHHHhcccHH-----------HH--------HhcCcc--------chh---------hHHHH----------HHHH
Confidence 99988753322210 00 000000 000 00011 1345
Q ss_pred HHhhcCceEEEeC-CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccc-----------
Q 041373 218 RFLSENTTVLVVG-DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSD----------- 285 (395)
Q Consensus 218 ~~L~~lP~~~~~~-~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~----------- 285 (395)
++++.||++..++ ++++||||++|.. ..+++++. +..+.. .+..-.-...++|+++...
T Consensus 159 ~~f~~LPl~avi~~~~l~vHgGi~p~~--~~l~~i~~-----i~r~~~--~~~~~~~~~dllWsDP~~~~~~~~~~~~~~ 229 (311)
T cd07419 159 RLFEWLPLAAIIEDKILCMHGGIGRSI--NHVSEIED-----LKRPLT--MEFGEQVVMDLLWSDPTENDSVLGLRPNAI 229 (311)
T ss_pred HHHHhCchhheecccEEEEccCCCCCC--CcHHHHhh-----cCCCCC--CCCCCcceeeeeccCccccccccccccCCC
Confidence 7899999988765 5899999998863 23454433 111110 0000001134556543211
Q ss_pred ---hh---hhcchHHHHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccc-cCCCcceEEEEeCCCcEEEEe
Q 041373 286 ---EE---KKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRG-CYDGLPEVLEINGNSELLVLT 358 (395)
Q Consensus 286 ---~~---~~~~~~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g-~~~G~lt~L~I~~~~~~~v~~ 358 (395)
+. ..+..+.++++|.+. +.+.||+||+.+..|+....++++++|.+...|. .+++.-+++.|+.+..+.+.-
T Consensus 230 ~~rg~g~~~~fg~~~~~~Fl~~n-~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~ 308 (311)
T cd07419 230 DPRGPGLIVKFGPDRVHRFLEEN-DLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKL 308 (311)
T ss_pred CCCCCCcceeECHHHHHHHHHHC-CCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEE
Confidence 11 134557888999885 9999999999998899877899999998766552 235667888888766666554
Q ss_pred cC
Q 041373 359 AN 360 (395)
Q Consensus 359 ~~ 360 (395)
..
T Consensus 309 ~~ 310 (311)
T cd07419 309 IH 310 (311)
T ss_pred eC
Confidence 33
No 16
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=99.96 E-value=1.5e-27 Score=230.40 Aligned_cols=230 Identities=17% Similarity=0.229 Sum_probs=160.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCc
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNH 137 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNH 137 (395)
.+++||||||||+.+|.++|+..++.+. +++||+||+||||++|.|++.+++.++.. +|++++++||||
T Consensus 42 ~~i~vvGDIHG~~~dL~~ll~~~~~~~~--------~~~lfLGDyVDRG~~s~evl~ll~~lk~~---~p~~v~llrGNH 110 (285)
T cd07415 42 SPVTVCGDIHGQFYDLLELFRVGGDPPD--------TNYLFLGDYVDRGYYSVETFLLLLALKVR---YPDRITLLRGNH 110 (285)
T ss_pred CCEEEEEeCCCCHHHHHHHHHHcCCCCC--------CeEEEEeEECCCCcCHHHHHHHHHHHhhc---CCCcEEEEeccc
Confidence 4699999999999999999998876543 36999999999999999999999999876 788999999999
Q ss_pred chhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHH
Q 041373 138 EIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIAR 217 (395)
Q Consensus 138 E~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~ 217 (395)
|.+.++..+.|..+ ...+|+. ..+. ....
T Consensus 111 E~~~~~~~ygf~~e-------------------~~~~y~~----------------------~~l~----------~~~~ 139 (285)
T cd07415 111 ESRQITQVYGFYDE-------------------CLRKYGN----------------------ANVW----------KYCT 139 (285)
T ss_pred chHhhhhhcchhHH-------------------HHHhcCc----------------------hHHH----------HHHH
Confidence 99877743322210 0000100 0000 1345
Q ss_pred HHhhcCceEEEeCC-EEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccch---------h
Q 041373 218 RFLSENTTVLVVGD-SVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDE---------E 287 (395)
Q Consensus 218 ~~L~~lP~~~~~~~-~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~---------~ 287 (395)
+++..||++..+++ +++||||++|.. ..+++++. +..... .|.. .....++|+++.... .
T Consensus 140 ~~f~~lPlaaii~~~i~cvHgGi~p~~--~~~~~i~~-----i~r~~~--~~~~-~~~~dllWsDP~~~~~~~~~~Rg~g 209 (285)
T cd07415 140 DLFDYLPLAALIDNQIFCVHGGLSPSI--DTLDQIRA-----IDRFQE--VPHE-GPMCDLLWSDPDDIEGWGISPRGAG 209 (285)
T ss_pred HHHHHhHHHhEeCCeEEEEcCCCCCCc--ccHHHhhc-----ccCCCC--CCCC-CCccceEecCCCccCCCCcCCCCCc
Confidence 78899999987765 788899998863 22444322 111110 1100 012457887643211 1
Q ss_pred hhcchHHHHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccc-cCCCcceEEEEeCCCcEEEEecC
Q 041373 288 KKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRG-CYDGLPEVLEINGNSELLVLTAN 360 (395)
Q Consensus 288 ~~~~~~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g-~~~G~lt~L~I~~~~~~~v~~~~ 360 (395)
..+..+.++++|.+. +.+.||+||++++.|+....++++++|.+...|. ..++.-++|.|+.+..+.+.+-.
T Consensus 210 ~~fg~~~~~~Fl~~n-~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~ 282 (285)
T cd07415 210 YLFGQDVVEEFNHNN-GLTLICRAHQLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFE 282 (285)
T ss_pred cccCHHHHHHHHHHC-CCeEEEEcCccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEec
Confidence 124567889999885 8999999999998899888899999999766552 23567788888877777666544
No 17
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=99.95 E-value=1.2e-27 Score=223.05 Aligned_cols=215 Identities=24% Similarity=0.302 Sum_probs=139.5
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcchh
Q 041373 61 IAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIM 140 (395)
Q Consensus 61 ~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE~~ 140 (395)
+|||||||++++|.++|+.++..+. +++||+||+||||+++.+++++++.++. .+.++++|+||||.+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~--------d~li~lGD~vdrg~~~~~~l~~l~~~~~----~~~~~~~l~GNHe~~ 68 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPN--------DKLIFLGDYVDRGPDSVEVIDLLLALKI----LPDNVILLRGNHEDM 68 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCC--------CEEEEECCEeCCCCCcHHHHHHHHHhcC----CCCcEEEEccCchhh
Confidence 5899999999999999998876432 4799999999999999999999998853 156899999999999
Q ss_pred hhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHHHHh
Q 041373 141 NIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFL 220 (395)
Q Consensus 141 ~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~L 220 (395)
++.....+.. ...|. ++..+... .....+. +...+|+
T Consensus 69 ~~~~~~~~~~---------~~~~~--~~~~~~~~--------------------------~~~~~~~------~~~~~~~ 105 (225)
T cd00144 69 LLNFLYGFYD---------EDEWI--GGTLRLLK--------------------------KLGEDLW------EEFNDVF 105 (225)
T ss_pred hhhhhcCCcc---------hhhcc--chhHHHHH--------------------------hhCHHHH------HHHHHHH
Confidence 8773221111 01111 10000000 0000000 2456899
Q ss_pred hcCceEEEeC--CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccchhhh------cch
Q 041373 221 SENTTVLVVG--DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKK------CDC 292 (395)
Q Consensus 221 ~~lP~~~~~~--~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~~~~------~~~ 292 (395)
.++|++++++ +++|||||+.|. .+...... ... .. .....++|.|........ ...
T Consensus 106 ~~lp~~~~~~~~~~~~vHag~~~~---~~~~~~~~-------~~~--~~----~~~~~~lw~r~~~~~~~~~~~~~~~~~ 169 (225)
T cd00144 106 FYLPLAALIETKKVLCVHGGLSPG---LPLEEQIK-------EEP--ED----QLPEDLLWSDPLELPGGFGSSRRGGGP 169 (225)
T ss_pred HhCcHheEeCCCeEEEEeCCCCCc---cchHHhhh-------cCc--cc----ccceeeeecCCCCCCCCCcCCCCCCCH
Confidence 9999999998 899999999887 33222111 000 00 123457777765432100 112
Q ss_pred HHHHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccc-cCCCcceEEE
Q 041373 293 SALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRG-CYDGLPEVLE 347 (395)
Q Consensus 293 ~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g-~~~G~lt~L~ 347 (395)
.....++.. .+.+.||+||||+..+......+++|+|||||+++ ..+|.+++++
T Consensus 170 ~~~~~~~~~-~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 170 DAVEWFLKK-NGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred HHHHHHHHH-CCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 233444444 58899999999998653223567789999999873 2367888775
No 18
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.95 E-value=8.5e-28 Score=222.46 Aligned_cols=202 Identities=24% Similarity=0.337 Sum_probs=132.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCc
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNH 137 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNH 137 (395)
+|+++||||||++.+|+++++.+++.... +.+|++||++|||+++.++++++.+. ++++|+|||
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~-------d~~~~~GD~v~~g~~~~~~~~~l~~~---------~~~~v~GNh 64 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPAR-------DRLISVGDLIDRGPESLACLELLLEP---------WFHAVRGNH 64 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCC-------CEEEEeCCcccCCCCHHHHHHHHhcC---------CEEEeECCC
Confidence 47999999999999999999987654333 37999999999999999999988652 689999999
Q ss_pred chhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHH
Q 041373 138 EIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIAR 217 (395)
Q Consensus 138 E~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~ 217 (395)
|.+++... ... ......|+.+++..+...+ + .... +.+.
T Consensus 65 e~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~------------~-----------~~~~----------~~~~ 103 (207)
T cd07424 65 EQMAIDAL----RAE----PLDAVRWLANGGEWFLDLP------------D-----------EELR----------RWLA 103 (207)
T ss_pred hHHHHhHh----hCC----CcchhHHHhcCCeehhhcC------------h-----------HHHH----------HHHH
Confidence 99987631 110 0112356666654432110 0 0000 2457
Q ss_pred HHhhcCceEEEeC----CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccchhhhcchH
Q 041373 218 RFLSENTTVLVVG----DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDEEKKCDCS 293 (395)
Q Consensus 218 ~~L~~lP~~~~~~----~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~~~~~~~~ 293 (395)
+||++||++++++ +++|||||+.+... ...+. +... .+ ......+|.|......
T Consensus 104 ~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~---~~~~~-------~~~~---~~---~~~~~~~w~~~~~~~~------ 161 (207)
T cd07424 104 LKLEQLPLAIEVETEGGKVGIVHADYPSDDW---SDGVG-------AVTL---RP---EDIEELLWSRTRIQKA------ 161 (207)
T ss_pred HHHHhCCeEEEEEeCCCEEEEECCCCCcchh---hhhhh-------cccc---Cc---ccceeeeeccchhhhc------
Confidence 8999999999863 58899999865410 00000 0000 00 1123467776433210
Q ss_pred HHHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCCcceEEEE
Q 041373 294 ALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEI 348 (395)
Q Consensus 294 ~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~lt~L~I 348 (395)
......+.+.||+||||++. + ...++ .+.|||||++ +|+|||+++
T Consensus 162 ----~~~~~~~~~~iV~GHTh~~~-~-~~~~~-~i~ID~Gsv~---gg~Lt~~~~ 206 (207)
T cd07424 162 ----QTQPIKGVDAVVHGHTPVKR-P-LRLGN-VLYIDTGAVF---DGNLTLLDL 206 (207)
T ss_pred ----CccccCCCCEEEECCCCCCc-c-eEECC-EEEEECCCCC---CCeEEEEec
Confidence 01122356899999999984 3 23344 6999999987 799999986
No 19
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=99.95 E-value=3.1e-27 Score=228.82 Aligned_cols=226 Identities=16% Similarity=0.256 Sum_probs=158.4
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCc
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNH 137 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNH 137 (395)
.+++||||||||+.+|.++|+.+++.+.+ .++|||||||||++|.|++.+++.++.. +|.+++++||||
T Consensus 52 ~p~~ViGDIHG~~~~L~~l~~~~~~~~~~--------~~lfLGDyVDRG~~s~evl~ll~~lk~~---~p~~v~llrGNH 120 (294)
T PTZ00244 52 PPVRVCGDTHGQYYDLLRIFEKCGFPPYS--------NYLFLGDYVDRGKHSVETITLQFCYKIV---YPENFFLLRGNH 120 (294)
T ss_pred CCceeeccCCCCHHHHHHHHHHcCCCCcc--------cEEEeeeEecCCCCHHHHHHHHHHHhhc---cCCeEEEEeccc
Confidence 35899999999999999999998876543 4999999999999999999999988875 788999999999
Q ss_pred chhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHH
Q 041373 138 EIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIAR 217 (395)
Q Consensus 138 E~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~ 217 (395)
|.+.++..+.|..+ . ...|. ..+ + ..+.
T Consensus 121 E~~~~~~~~gf~~e--~---------------------------------~~~y~-------~~l---~-------~~~~ 148 (294)
T PTZ00244 121 ECASINKMYGFFDD--V---------------------------------KRRYN-------IKL---F-------KAFT 148 (294)
T ss_pred chHhHhhccChHHH--H---------------------------------HHHhh-------HHH---H-------HHHH
Confidence 99877643222110 0 00000 000 0 2456
Q ss_pred HHhhcCceEEEeC-CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccc--h--------
Q 041373 218 RFLSENTTVLVVG-DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSD--E-------- 286 (395)
Q Consensus 218 ~~L~~lP~~~~~~-~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~--~-------- 286 (395)
+|+..||++..++ ++++||||++|... .++.++. +..+.. .|.. .-...++|+.+... +
T Consensus 149 ~~f~~lPlaaii~~~il~vHgGi~p~~~--~l~~i~~-----i~rp~~--~~~~-~~~~dllWsDP~~~~~~~~~~~Rg~ 218 (294)
T PTZ00244 149 DVFNTMPVCCVISEKIICMHGGLSPDLT--SLASVNE-----IERPCD--VPDR-GILCDLLWADPEDEVRGFLESDRGV 218 (294)
T ss_pred HHHHhCchheEecCeeEEEcCCCCchhh--HHHHhhh-----hccccC--CCcc-chhheeeecCcccccCCCCcCCCCC
Confidence 8899999999886 68999999988632 2333322 111111 1110 01246778765321 1
Q ss_pred hhhcchHHHHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccc-cCCCcceEEEEeCCCcEEEE
Q 041373 287 EKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRG-CYDGLPEVLEINGNSELLVL 357 (395)
Q Consensus 287 ~~~~~~~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g-~~~G~lt~L~I~~~~~~~v~ 357 (395)
...+..+.++++|... +.+.||+||+.++.|+....++++++|.+...|. ..++.-++|.|+.+..+.+.
T Consensus 219 g~~fg~~~~~~Fl~~n-~l~~iiR~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~ 289 (294)
T PTZ00244 219 SYLFGEDIVNDFLDMV-DMDLIVRAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFL 289 (294)
T ss_pred ccccCHHHHHHHHHHc-CCcEEEEcCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEE
Confidence 1124567889999885 8999999999998898877899999999866552 23566788888876666554
No 20
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=99.95 E-value=6.8e-27 Score=228.02 Aligned_cols=247 Identities=18% Similarity=0.246 Sum_probs=169.9
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCC
Q 041373 57 VDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGN 136 (395)
Q Consensus 57 ~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GN 136 (395)
..+++|||||||++.+|.++|+..++.+.+ .+|||||+||||++++|++.+++.++.. +|.+++++|||
T Consensus 58 ~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~--------~ylfLGDyVDRG~~s~evl~ll~~lki~---~p~~v~llRGN 126 (320)
T PTZ00480 58 EAPLKICGDVHGQYFDLLRLFEYGGYPPES--------NYLFLGDYVDRGKQSLETICLLLAYKIK---YPENFFLLRGN 126 (320)
T ss_pred CCCeEEEeecccCHHHHHHHHHhcCCCCcc--------eEEEeceecCCCCCcHHHHHHHHHhccc---CCCceEEEecc
Confidence 457999999999999999999988876543 5999999999999999999999999875 78899999999
Q ss_pred cchhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHH
Q 041373 137 HEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIA 216 (395)
Q Consensus 137 HE~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~ 216 (395)
||.+.++..+.|..+- ...|. ...| ...
T Consensus 127 HE~~~~~~~ygF~~e~-----------------------------------~~~y~---~~l~--------------~~~ 154 (320)
T PTZ00480 127 HECASINRIYGFYDEC-----------------------------------KRRYT---IKLW--------------KTF 154 (320)
T ss_pred cchhhhhhhcchHHHH-----------------------------------HhhcC---HHHH--------------HHH
Confidence 9998877433222100 00000 0001 134
Q ss_pred HHHhhcCceEEEeC-CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccc--h-------
Q 041373 217 RRFLSENTTVLVVG-DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSD--E------- 286 (395)
Q Consensus 217 ~~~L~~lP~~~~~~-~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~--~------- 286 (395)
.+.+..||++..++ ++++||||++|.. ..+++++. +..+.. .|.. .-...++|+.+... +
T Consensus 155 ~~~F~~LPlaAiI~~~i~cvHGGI~p~~--~~l~~i~~-----i~rp~~--~~~~-~~~~dllWSDP~~~~~~~~~s~RG 224 (320)
T PTZ00480 155 TDCFNCLPVAALIDEKILCMHGGLSPEL--SNLEQIRR-----IMRPTD--VPDT-GLLCDLLWSDPDKDVQGWADNERG 224 (320)
T ss_pred HHHHHhccHhheecCcEEEEcCCcCccc--CCHHHHhc-----ccCCCC--CCcc-chhhheeecCcccccCCCccCCCC
Confidence 56779999998776 6788899998862 23444432 111110 1110 11246778765321 1
Q ss_pred -hhhcchHHHHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccC--CCcceEEEEeCCCcEEEEecCCcc
Q 041373 287 -EKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCY--DGLPEVLEINGNSELLVLTANPLY 363 (395)
Q Consensus 287 -~~~~~~~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~--~G~lt~L~I~~~~~~~v~~~~~~~ 363 (395)
...+..+.++++|... +.++||+||+.+..|+....++++++|.+.+.| |+ ++.-++|.|+.+..+.+.+-.|..
T Consensus 225 ~g~~FG~~~~~~Fl~~n-~l~~IiR~Hq~v~~G~~~~~~~~~iTvFSa~~Y-~~~~~N~ga~l~i~~~~~~~~~~~~p~~ 302 (320)
T PTZ00480 225 VSYVFSQEIVQVFLKKH-ELDLICRAHQVVEDGYEFFSKRQLVTLFSAPNY-CGEFDNAGSMMTIDESLMCSFQILKPAE 302 (320)
T ss_pred CccccCHHHHHHHHHhC-CCcEEEEcCccccCceEEeCCCcEEEEeCCccc-CCCCCccEEEEEECCCCcEeEEEecCCc
Confidence 1124567888999885 899999999999889887789999999976655 43 456677888887777776666554
Q ss_pred cccCccccCCCccccccc
Q 041373 364 QNKNKVYLAPDSKEGLGL 381 (395)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~ 381 (395)
+++.. ....|+|-+-
T Consensus 303 ~~~~~---~~~~~~~~~~ 317 (320)
T PTZ00480 303 QGQGA---SQQNKPGSAK 317 (320)
T ss_pred ccccc---cccccCCCCC
Confidence 44432 3445666543
No 21
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=99.95 E-value=4.9e-27 Score=227.59 Aligned_cols=226 Identities=17% Similarity=0.242 Sum_probs=158.3
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCc
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNH 137 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNH 137 (395)
.+++||||||||+.+|.++|+..++.+.+ .+|||||+||||+++.|++.+++.++.. +|.+++++||||
T Consensus 50 ~~i~viGDIHG~~~~L~~l~~~~~~~~~~--------~~lfLGDyVDRG~~s~e~i~ll~~lk~~---~p~~i~llrGNH 118 (293)
T cd07414 50 APLKICGDIHGQYYDLLRLFEYGGFPPES--------NYLFLGDYVDRGKQSLETICLLLAYKIK---YPENFFLLRGNH 118 (293)
T ss_pred CceEEEEecCCCHHHHHHHHHhcCCCCcc--------eEEEEeeEecCCCCcHHHHHHHHHhhhh---CCCcEEEEeccc
Confidence 46999999999999999999998876543 5999999999999999999999999876 888999999999
Q ss_pred chhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHH
Q 041373 138 EIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIAR 217 (395)
Q Consensus 138 E~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~ 217 (395)
|.+.++..+.|..+ . ...|. ..+- ....
T Consensus 119 E~~~~~~~~gf~~e--~---------------------------------~~~y~-------~~l~----------~~~~ 146 (293)
T cd07414 119 ECASINRIYGFYDE--C---------------------------------KRRYN-------IKLW----------KTFT 146 (293)
T ss_pred chhhHhhhcchhhH--H---------------------------------HHhhh-------HHHH----------HHHH
Confidence 99887743322210 0 00000 0000 1345
Q ss_pred HHhhcCceEEEeC-CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccc---------h-
Q 041373 218 RFLSENTTVLVVG-DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSD---------E- 286 (395)
Q Consensus 218 ~~L~~lP~~~~~~-~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~---------~- 286 (395)
+++..||++..++ ++++||||++|.. ..+++++.. ..+.. .|.. .-...++|+++... +
T Consensus 147 ~~f~~lPlaa~i~~~i~cvHgGi~p~~--~~l~~i~~i-----~r~~~--~~~~-~~~~dllWsDP~~~~~~~~~~~Rg~ 216 (293)
T cd07414 147 DCFNCLPVAAIIDEKIFCMHGGLSPDL--QSMEQIRRI-----MRPTD--VPDQ-GLLCDLLWSDPDKDVQGWGENDRGV 216 (293)
T ss_pred HHHHHhHHHHhhCCcEEEEccCCCccc--CcHHHHhcc-----cCCCC--CCch-hhHhhhhccCcccccCCCccCCCCc
Confidence 7889999998776 5788899998862 235554331 11110 0100 01235677654311 0
Q ss_pred hhhcchHHHHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccC--CCcceEEEEeCCCcEEEEe
Q 041373 287 EKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCY--DGLPEVLEINGNSELLVLT 358 (395)
Q Consensus 287 ~~~~~~~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~--~G~lt~L~I~~~~~~~v~~ 358 (395)
...+..+.++++|+.. +.++||+||+++..|+....++++|+|.+...| |+ ++.-++|.|+.+..+.+..
T Consensus 217 g~~fg~~~~~~Fl~~n-~l~~iiR~He~~~~G~~~~~~~~~iTvfSa~~Y-~~~~~N~~a~l~i~~~~~~~~~~ 288 (293)
T cd07414 217 SFTFGKDVVAKFLNKH-DLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNY-CGEFDNAGAMMSVDETLMCSFQI 288 (293)
T ss_pred ceecCHHHHHHHHHHc-CCeEEEECCccccCeEEEeCCCcEEEEecCCcc-cCCCCceEEEEEECCCCcEEEEE
Confidence 1124567889999885 899999999999889887789999999876555 43 5677888888777666543
No 22
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=99.95 E-value=9.7e-27 Score=226.09 Aligned_cols=233 Identities=16% Similarity=0.186 Sum_probs=159.7
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCC
Q 041373 57 VDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGN 136 (395)
Q Consensus 57 ~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GN 136 (395)
..+++||||||||+.+|.++++..+..+. +.++||||+||||+.+.|++.+++.++.. +|.+++++|||
T Consensus 42 ~~~i~vvGDIHG~~~~L~~l~~~~~~~~~--------~~~lfLGDyVDRG~~s~evl~ll~~lk~~---~p~~v~llrGN 110 (303)
T PTZ00239 42 RAPVNVCGDIHGQFYDLQALFKEGGDIPN--------ANYIFIGDFVDRGYNSVETMEYLLCLKVK---YPGNITLLRGN 110 (303)
T ss_pred CCCEEEEEeCCCCHHHHHHHHHhcCCCCC--------ceEEEeeeEcCCCCCHHHHHHHHHHhhhc---CCCcEEEEecc
Confidence 35699999999999999999998876543 36999999999999999999999999875 78899999999
Q ss_pred cchhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHH
Q 041373 137 HEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIA 216 (395)
Q Consensus 137 HE~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~ 216 (395)
||.+.++..+.|..+ ...+|+. ..+ + ...
T Consensus 111 HE~~~~~~~~gf~~e-------------------~~~ky~~----------------------~~~---~-------~~~ 139 (303)
T PTZ00239 111 HESRQCTQVYGFYEE-------------------ILRKYGN----------------------SNP---W-------RLF 139 (303)
T ss_pred cchHHHhhhcChHHH-------------------HHHHhcC----------------------hhH---H-------HHH
Confidence 999887743322210 0000110 000 0 134
Q ss_pred HHHhhcCceEEEeC-CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccch---------
Q 041373 217 RRFLSENTTVLVVG-DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDE--------- 286 (395)
Q Consensus 217 ~~~L~~lP~~~~~~-~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~--------- 286 (395)
.+++..||++..++ ++++||||++|.. ..+++++. +..+.. .|.. ....+++|+.+....
T Consensus 140 ~~~f~~LPlaaii~~~i~cvHgGi~p~~--~~l~~i~~-----i~r~~~--~~~~-~~~~dllWsDP~~~~~~~~~~Rg~ 209 (303)
T PTZ00239 140 MDVFDCLPLAALIEGQILCVHGGLSPDM--RTIDQIRT-----IDRKIE--IPHE-GPFCDLMWSDPEEVEYWAVNSRGA 209 (303)
T ss_pred HHHHHhCchheEEcCeEEEEcCccCccc--ccHhhhcc-----ccCCCC--CCCC-CCceeeEecCccccCCCccCCCCC
Confidence 57889999998876 5888999998863 23444322 111110 1110 112467887653111
Q ss_pred hhhcchHHHHHHHhcCCCCcEEEEcccCCCCCcccccC-CcEEEEecCCccc-cCCCcceEEEEeCCCcEEEEecCCc
Q 041373 287 EKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCD-NRAIRIDVGLSRG-CYDGLPEVLEINGNSELLVLTANPL 362 (395)
Q Consensus 287 ~~~~~~~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~-~~~i~IDtG~~~g-~~~G~lt~L~I~~~~~~~v~~~~~~ 362 (395)
...+..+.++++|... +.+.||+||+.++.|+...++ +++++|.+...|. ..++.-++|.|+.+.++.+.+-.|.
T Consensus 210 g~~fg~~~~~~Fl~~n-~l~~iiR~He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~ 286 (303)
T PTZ00239 210 GYLFGAKVTKEFCRLN-DLTLICRAHQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEV 286 (303)
T ss_pred ccccCHHHHHHHHHHC-CCcEEEEcChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCC
Confidence 1124557889999885 899999999999889876554 4599998766552 1245778889988777777655543
No 23
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=99.95 E-value=3.6e-26 Score=222.90 Aligned_cols=224 Identities=18% Similarity=0.255 Sum_probs=153.5
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCc
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNH 137 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNH 137 (395)
.+++||||||||+.+|.++|+..+..+. ++++|||||||||++|+||+.+++.++.. +|.+++++||||
T Consensus 43 ~~i~ViGDIHG~~~dL~~l~~~~g~~~~--------~~ylFLGDyVDRG~~s~Evi~lL~~lki~---~p~~v~lLRGNH 111 (305)
T cd07416 43 APVTVCGDIHGQFYDLLKLFEVGGSPAN--------TRYLFLGDYVDRGYFSIECVLYLWALKIL---YPKTLFLLRGNH 111 (305)
T ss_pred CCEEEEEeCCCCHHHHHHHHHhcCCCCC--------ceEEEECCccCCCCChHHHHHHHHHHHhh---cCCCEEEEeCCC
Confidence 4799999999999999999998776543 46999999999999999999999999886 788999999999
Q ss_pred chhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHH
Q 041373 138 EIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIAR 217 (395)
Q Consensus 138 E~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~ 217 (395)
|.+.++..+.|..+ . +.. +. . ..+ ....
T Consensus 112 E~~~l~~~~gf~~e-----~--~~~----------------------------y~-------~---~l~-------~~~~ 139 (305)
T cd07416 112 ECRHLTEYFTFKQE-----C--KIK----------------------------YS-------E---RVY-------DACM 139 (305)
T ss_pred cHHHHHHhhCchhH-----H--HHh----------------------------cc-------H---HHH-------HHHH
Confidence 99877642222110 0 000 00 0 001 1356
Q ss_pred HHhhcCceEEEeC-CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccc-----------
Q 041373 218 RFLSENTTVLVVG-DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSD----------- 285 (395)
Q Consensus 218 ~~L~~lP~~~~~~-~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~----------- 285 (395)
+++..||++..++ ++++||||++|.. ..+++++. +.... ..|.. ....+++|+.+...
T Consensus 140 ~~f~~LPlaaii~~~i~~vHGGi~p~~--~~l~~i~~-----i~r~~--~~~~~-~~~~dllWsDP~~~~~~~~~~~~~~ 209 (305)
T cd07416 140 EAFDCLPLAALMNQQFLCVHGGLSPEL--KTLDDIRK-----LDRFR--EPPAF-GPMCDLLWSDPLEDFGNEKTQEHFV 209 (305)
T ss_pred HHHhhccceeEEcCCEEEEcCCCCccc--ccHHHhcc-----cCCCC--CCCCC-CcceeeeecCccccccccccccccc
Confidence 7889999998776 5899999998873 23444433 11110 01110 11245677654211
Q ss_pred -----h-hhhcchHHHHHHHhcCCCCcEEEEcccCCCCCcccccCC------cEEEEecCCccccC--CCcceEEEEeCC
Q 041373 286 -----E-EKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDN------RAIRIDVGLSRGCY--DGLPEVLEINGN 351 (395)
Q Consensus 286 -----~-~~~~~~~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~------~~i~IDtG~~~g~~--~G~lt~L~I~~~ 351 (395)
+ ...+..+.++++|... +.++||+||+.+..|+....++ ++++|.+...| |+ ++.-++|.|+.+
T Consensus 210 ~~~~Rg~g~~fG~~~~~~Fl~~n-~l~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y-~~~~~N~~a~l~i~~~ 287 (305)
T cd07416 210 HNTVRGCSYFYSYRAVCEFLQKN-NLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNY-LDVYNNKAAVLKYENN 287 (305)
T ss_pred ccCCCCCceecCHHHHHHHHHHc-CCeEEEEeccccccceEEecCCCcCCCCcEEEEeCCccc-cCCCCceEEEEEEcCC
Confidence 0 1123556788999885 8999999999998898765554 89999876655 42 456778888763
Q ss_pred CcEEEE
Q 041373 352 SELLVL 357 (395)
Q Consensus 352 ~~~~v~ 357 (395)
...+.
T Consensus 288 -~~~~~ 292 (305)
T cd07416 288 -VMNIR 292 (305)
T ss_pred -cceEE
Confidence 34443
No 24
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=99.95 E-value=2.4e-26 Score=227.79 Aligned_cols=231 Identities=19% Similarity=0.171 Sum_probs=152.1
Q ss_pred CCCCeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeC
Q 041373 55 PRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMN 134 (395)
Q Consensus 55 ~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~ 134 (395)
+...+++||||||||+.+|..+|+.+++.+.+ ..+||||||||||++|.||+.+++.++.. +|.+++++|
T Consensus 63 ~~~~~i~VvGDIHG~~~dL~~ll~~~g~~~~~-------~~ylFLGDyVDRGp~SlEvl~lL~~lki~---~p~~v~lLR 132 (377)
T cd07418 63 EDVCEVVVVGDVHGQLHDVLFLLEDAGFPDQN-------RFYVFNGDYVDRGAWGLETFLLLLSWKVL---LPDRVYLLR 132 (377)
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHHhCCCCCC-------ceEEEeccccCCCCChHHHHHHHHHHhhc---cCCeEEEEe
Confidence 34468999999999999999999998876543 36999999999999999999999999875 889999999
Q ss_pred CCcchhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCch
Q 041373 135 GNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGP 214 (395)
Q Consensus 135 GNHE~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~ 214 (395)
||||.+.++..+.|..+ ....++. . ...+. +
T Consensus 133 GNHE~~~i~~~~Gf~~E-------------------~~~~y~~------------~--------~~~l~----------~ 163 (377)
T cd07418 133 GNHESKFCTSMYGFEQE-------------------VLTKYGD------------K--------GKHVY----------R 163 (377)
T ss_pred eecccccchhhcccchh-------------------hhhhcCc------------h--------HHHHH----------H
Confidence 99999877633222110 0000000 0 00111 2
Q ss_pred HHHHHhhcCceEEEeC-CEEEEecCCCCCccc-------------------------cChhhhhHHHHHHHhcccCCCCC
Q 041373 215 IARRFLSENTTVLVVG-DSVFVHGGLLKQHVE-------------------------YGLERINREVRDWINGLMGKSAP 268 (395)
Q Consensus 215 ~~~~~L~~lP~~~~~~-~~lfvHAGl~p~~~~-------------------------~~le~~n~~~~~wi~~~~~~~~p 268 (395)
...+|++.||+++.++ ++++|||||.+.... ..+++++. ++... ..|
T Consensus 164 ~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~-----i~r~~--~~~ 236 (377)
T cd07418 164 KCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMK-----ARRSV--LDP 236 (377)
T ss_pred HHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhh-----CCCCC--CCC
Confidence 4568999999999887 478889999553110 01222211 11110 011
Q ss_pred CCcC---CCCcccccccccch----------hhhcchHHHHHHHhcCCCCcEEEEcccC------------CCCCccccc
Q 041373 269 GYCK---GRHAVVWLRKFSDE----------EKKCDCSALEHALATIPGVKRMIMGHTI------------QEKGINAVC 323 (395)
Q Consensus 269 ~~~~---~~~~~lW~R~~~~~----------~~~~~~~~l~~~L~~~~g~~~vV~GHT~------------~~~gi~~~~ 323 (395)
.... -..+++|+++.... ...+..+.++++|... +.+.||+||+. +..|+...+
T Consensus 237 ~~~~~~~i~~dlLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n-~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~ 315 (377)
T cd07418 237 PGEGSNLIPGDVLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKN-NLKLIIRSHEGPDAREKRPGLAGMNKGYTVDH 315 (377)
T ss_pred CCCCccccceeeEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHc-CCcEEEECCCCcccccccccchhhhCceEEec
Confidence 1100 02478887753211 1124567889999885 89999999996 445776555
Q ss_pred C---CcEEEEecCCccc-------cCCCcceEEEEeCCC
Q 041373 324 D---NRAIRIDVGLSRG-------CYDGLPEVLEINGNS 352 (395)
Q Consensus 324 ~---~~~i~IDtG~~~g-------~~~G~lt~L~I~~~~ 352 (395)
+ +++++|.+...|. .+++.-+++.|+.++
T Consensus 316 ~~~~~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~ 354 (377)
T cd07418 316 DVESGKLITLFSAPDYPQFQATEERYNNKGAYIILQPPD 354 (377)
T ss_pred cCCCCcEEEEecCCccccccccccccCcceEEEEEecCC
Confidence 5 8899998866552 135566777776533
No 25
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=99.94 E-value=1.5e-26 Score=211.40 Aligned_cols=231 Identities=20% Similarity=0.346 Sum_probs=163.7
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCC
Q 041373 57 VDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGN 136 (395)
Q Consensus 57 ~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GN 136 (395)
..++.|+|||||++.+|.++++.-|-.++. .++|||||||||-.|+|++.+|+.||.. ||.++.++|||
T Consensus 42 ~tPvtvcGDIHGQf~Dllelf~igG~~~~t--------~YLFLGDyVDRG~~SvEt~lLLl~lK~r---YP~ritLiRGN 110 (303)
T KOG0372|consen 42 DTPVTVCGDIHGQFYDLLELFRIGGDVPET--------NYLFLGDYVDRGYYSVETFLLLLALKVR---YPDRITLIRGN 110 (303)
T ss_pred CCCcEEeecccchHHHHHHHHHhCCCCCCC--------ceEeecchhccccchHHHHHHHHHHhhc---CcceeEEeecc
Confidence 346899999999999999999987766554 5999999999999999999999999987 89999999999
Q ss_pred cchhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHH
Q 041373 137 HEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIA 216 (395)
Q Consensus 137 HE~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~ 216 (395)
||...+...|.|.++. ++.|.+-+-| . ..
T Consensus 111 HEsRqitqvYGFY~Ec-lrKYG~~~vW------------------------------------r--------------~c 139 (303)
T KOG0372|consen 111 HESRQITQVYGFYDEC-LRKYGSANVW------------------------------------R--------------YC 139 (303)
T ss_pred chhhhhhhhhhHHHHH-HHHcCChHHH------------------------------------H--------------HH
Confidence 9999988666665432 2222221222 1 12
Q ss_pred HHHhhcCceEEEeC-CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccch---------
Q 041373 217 RRFLSENTTVLVVG-DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDE--------- 286 (395)
Q Consensus 217 ~~~L~~lP~~~~~~-~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~--------- 286 (395)
.+-+.-||+...++ ++++||||++|.. ..++.+...++. ...|.. ....+++|+.+....
T Consensus 140 ~eiFdyL~l~aiid~kifCVHGGlSP~i--~~lDqIr~lDR~-------~Eiph~-g~m~DllWSDPee~~g~~~SPRGa 209 (303)
T KOG0372|consen 140 TEIFDYLSLAAIIDGKIFCVHGGLSPSI--QTLDQIRVLDRK-------QEVPHD-GAMCDLLWSDPEEGPGWGLSPRGA 209 (303)
T ss_pred HHHHHhhhHhheecCcEEEEcCCCCcch--hhHHHHHHhhcc-------ccCCCC-CcchheeccCcccCCCcccCCCCc
Confidence 24455688887775 6778899999982 224444221111 112211 112478887754321
Q ss_pred hhhcchHHHHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccC--CCcceEEEEeCC--CcEEEEecCC
Q 041373 287 EKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCY--DGLPEVLEINGN--SELLVLTANP 361 (395)
Q Consensus 287 ~~~~~~~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~--~G~lt~L~I~~~--~~~~v~~~~~ 361 (395)
..-+..+.++.++.. ++..+|++.|+-+.+|+...++.+++++=+.. .+|| |+..++|+|+.+ ...+|+..-|
T Consensus 210 GylFG~dvv~~F~~~-N~~~~I~RaHQLv~eGyk~~F~~~v~TVWSAP-NYCYrCGN~AsIl~lde~~~~~F~vFeaa~ 286 (303)
T KOG0372|consen 210 GYLFGEDVVESFLEA-NGLSLICRAHQLVMEGYKWHFDEKVVTVWSAP-NYCYRCGNVAAILELDEDLDKDFRVFEAAP 286 (303)
T ss_pred cccccHHHHHHHHHh-CChHHHHHHHHHHHhhHHHhcCCceEEEecCC-chhhhcCChHHheeeccccCcceEeeecch
Confidence 122455677888876 48999999999999899888999988886544 4465 667789999964 3566666654
No 26
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=99.93 E-value=5.7e-25 Score=215.23 Aligned_cols=232 Identities=18% Similarity=0.285 Sum_probs=166.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhC-CCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCC
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAG-LINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGN 136 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~-~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GN 136 (395)
.+|.|+|||||++.+|.+++...| +++. ++++|||||||||++|+|++-+|+.++.. +|++++++|||
T Consensus 59 aPV~i~GDiHGq~~DLlrlf~~~g~~pp~--------~~ylFLGDYVDRG~~slE~i~LL~a~Ki~---yp~~~~lLRGN 127 (331)
T KOG0374|consen 59 APVKIVGDIHGQFGDLLRLFDLLGSFPPD--------QNYVFLGDYVDRGKQSLETICLLFALKIK---YPENVFLLRGN 127 (331)
T ss_pred CCEEEEccCcCCHHHHHHHHHhcCCCCCc--------ccEEEecccccCCccceEEeehhhhhhhh---CCceEEEeccc
Confidence 379999999999999999999998 7654 35999999999999999999999999997 99999999999
Q ss_pred cchhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHH
Q 041373 137 HEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIA 216 (395)
Q Consensus 137 HE~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~ 216 (395)
||.+.++-.|.|.. ++.+ .|+ + ...| ..+
T Consensus 128 HE~~~in~~yGFyd-----------E~~r--------r~~----------------~--~~~w--------------~~F 156 (331)
T KOG0374|consen 128 HECASINRIYGFYD-----------ECKR--------RYG----------------E--IKLW--------------KAF 156 (331)
T ss_pred cccccccceeeeHH-----------HHHH--------hcc----------------h--HHHH--------------HHH
Confidence 99999884332222 1110 000 0 0001 123
Q ss_pred HHHhhcCceEEEeC-CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccc------h---
Q 041373 217 RRFLSENTTVLVVG-DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSD------E--- 286 (395)
Q Consensus 217 ~~~L~~lP~~~~~~-~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~------~--- 286 (395)
.+-+..||++..++ +.+++|||++|... .++.++. +..+. ..|+. .-..+++|...-.. .
T Consensus 157 ~~~f~~mp~~a~i~~kI~CmhGGlsp~l~--~~~~i~~-----i~rp~--~~~~~-gll~DLlWsdp~~~~~g~~~n~Rg 226 (331)
T KOG0374|consen 157 NDAFNCLPLAALIDGKILCMHGGLSPHLK--SLDQIRA-----IPRPT--DSPDK-GLLCDLLWSDPDDDVPGWEENDRG 226 (331)
T ss_pred HHHHhhCchhheecceEEEecCCCChhhc--ChHHHhh-----ccCCc--CCCcc-ceeeeeeecCCCCCCCCcccCCCc
Confidence 46688899998887 57777999999742 2444432 22221 11211 01356777654321 0
Q ss_pred -hhhcchHHHHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCcccc--CCCcceEEEEeCCCcEEEEecCCcc
Q 041373 287 -EKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGC--YDGLPEVLEINGNSELLVLTANPLY 363 (395)
Q Consensus 287 -~~~~~~~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~--~~G~lt~L~I~~~~~~~v~~~~~~~ 363 (395)
...+..+.+++++... +.++||++|+.+.+|+....+.++++|.+...| | +++.-+++.++.+..+.|....|.+
T Consensus 227 ~s~~fg~~~v~~f~~~~-~ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Y-cg~~~n~gavm~Vd~~l~~sf~~l~p~~ 304 (331)
T KOG0374|consen 227 VSFTFGPAVVEDFCKKL-DLDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNY-CGEFDNAGAVMRVDKNLKCSFVILRPEG 304 (331)
T ss_pred eeeEecHHHHHHHHHHh-CcceEEEcCccccccceEecCceEEEEecCchh-ccccCCceEEEEECCCCeEEEEEecccc
Confidence 1125567788888885 899999999999999987788889999876644 4 3556688999988888888888754
No 27
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=99.90 E-value=2.4e-23 Score=187.67 Aligned_cols=236 Identities=19% Similarity=0.315 Sum_probs=157.1
Q ss_pred CCCCeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeC
Q 041373 55 PRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMN 134 (395)
Q Consensus 55 ~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~ 134 (395)
|-..++.|+|||||++.+|.++++..|-.+.. .+||+||+||||-.|+|+..+|+.|+.. +|.++.++|
T Consensus 43 PV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~t--------nYiFmGDfVDRGyySLEtfT~l~~Lkar---yP~~ITLlR 111 (306)
T KOG0373|consen 43 PVSTPVTVCGDIHGQFYDLLELFRTGGQVPDT--------NYIFMGDFVDRGYYSLETFTLLLLLKAR---YPAKITLLR 111 (306)
T ss_pred ccCCCeeEeeccchhHHHHHHHHHhcCCCCCc--------ceEEeccccccccccHHHHHHHHHHhhc---CCceeEEee
Confidence 44456899999999999999999988877643 4999999999999999999999999875 899999999
Q ss_pred CCcchhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCch
Q 041373 135 GNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGP 214 (395)
Q Consensus 135 GNHE~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~ 214 (395)
||||...+...|.|.++. ...|.+-+.| +
T Consensus 112 GNHEsRqitqVYGFydEC-q~KYGnan~w------------------------------------k-------------- 140 (306)
T KOG0373|consen 112 GNHESRQITQVYGFYDEC-QNKYGNANVW------------------------------------K-------------- 140 (306)
T ss_pred ccchhhhhhhhhhhHHHH-HhhcCCchHH------------------------------------H--------------
Confidence 999998887666665432 1112111111 0
Q ss_pred HHHHHhhcCceEEEeC-CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccch-------
Q 041373 215 IARRFLSENTTVLVVG-DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDE------- 286 (395)
Q Consensus 215 ~~~~~L~~lP~~~~~~-~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~------- 286 (395)
..-+-+.-|+++..++ ++++||||++|+. ..++.+.-.. |.. .-|.. ..-.+++|+.+..-.
T Consensus 141 ycckVFD~LtlaAiID~~vLCVHGGLSPdi--rtlDqir~i~----R~q---EiPh~-G~fcDlmWSDPedve~W~vSpR 210 (306)
T KOG0373|consen 141 YCCKVFDFLTLAAIIDEKVLCVHGGLSPDI--RTLDQIRLIE----RNQ---EIPHE-GPFCDLMWSDPEDVETWAVSPR 210 (306)
T ss_pred HHHHHHhhhhHHHHhcCcEEEEcCCCCccc--eeHHHHHhHH----hhc---cCCCC-CCccceeccChhhhhhheeCCC
Confidence 1122344466666665 6899999999983 3344442211 111 11210 112567887653211
Q ss_pred -hhhcchHHHHHHHhcCCCCcEEEEcccCCCCCcccccCCc-EEEEecCCccccC--CCcceEEEEeCC--CcEEEEecC
Q 041373 287 -EKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNR-AIRIDVGLSRGCY--DGLPEVLEINGN--SELLVLTAN 360 (395)
Q Consensus 287 -~~~~~~~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~-~i~IDtG~~~g~~--~G~lt~L~I~~~--~~~~v~~~~ 360 (395)
+.=...+.+..-+.++++.++|-+.|+-+.+|+...++.+ ++.+=+.. .+|| |+..+++.++++ .+.++++.-
T Consensus 211 GAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG~KymF~eK~lvTVWSAP-NYCYRCGNvAsi~~~d~~~~r~~k~F~av 289 (306)
T KOG0373|consen 211 GAGWLFGSKVTTEFNHINNLNLICRAHQLVQEGFKYMFDEKGLVTVWSAP-NYCYRCGNVASIMSFDDNLERETKIFSAV 289 (306)
T ss_pred CcceeechhhhHHHHhccchHHHHhHHHHHHhhHHhccCCCCEEEEecCC-chhhhccCeeeEEEecccCCccceeeeec
Confidence 1111223444445566788999999999988988877777 66665544 3354 566788888864 366777776
Q ss_pred Ccc
Q 041373 361 PLY 363 (395)
Q Consensus 361 ~~~ 363 (395)
|.-
T Consensus 290 pd~ 292 (306)
T KOG0373|consen 290 PDN 292 (306)
T ss_pred CCc
Confidence 544
No 28
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=99.87 E-value=1.6e-22 Score=186.28 Aligned_cols=233 Identities=18% Similarity=0.224 Sum_probs=157.0
Q ss_pred CCCCeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeC
Q 041373 55 PRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMN 134 (395)
Q Consensus 55 ~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~ 134 (395)
+-..+++|+|||||||++|.++++.-|..+. +.++|+|||||||++|.|++.+|..+|.. ||.+|.++|
T Consensus 57 ~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pd--------tnylfmGDyvdrGy~SvetVS~lva~Kvr---y~~rvtilr 125 (319)
T KOG0371|consen 57 PVNCPVTVCGDVHGQFHDLIELFKIGGLAPD--------TNYLFMGDYVDRGYYSVETVSLLVALKVR---YPDRVTILR 125 (319)
T ss_pred ccccceEEecCcchhHHHHHHHHHccCCCCC--------cceeeeeeecccccchHHHHHHHHHhhcc---ccceeEEec
Confidence 3445789999999999999999977665544 35999999999999999999999999986 899999999
Q ss_pred CCcchhhhhhhhccccccchhhhhhhhhhhhcCc-cccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCc
Q 041373 135 GNHEIMNIEADFRYATEMGLKEFEDWANWYCIGN-KMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDG 213 (395)
Q Consensus 135 GNHE~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~-~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~ 213 (395)
||||...+...+. .+.+|++.-| .++ |.
T Consensus 126 GNHEsrqitqvyg-----------fydeclRkyg~anv---------------------------w~------------- 154 (319)
T KOG0371|consen 126 GNHESRQITQVYG-----------FYDECLRKYGNANV---------------------------WK------------- 154 (319)
T ss_pred CchHHHHHHHHHh-----------hHHHHHhhcccccc---------------------------hH-------------
Confidence 9999988774332 2345655322 111 11
Q ss_pred hHHHHHhhcCceEEEeC-CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccch------
Q 041373 214 PIARRFLSENTTVLVVG-DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDE------ 286 (395)
Q Consensus 214 ~~~~~~L~~lP~~~~~~-~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~------ 286 (395)
.+.+.+.-+|+...++ +++..|||++|+... ++.+....+ +. ..|.. ....+++|+......
T Consensus 155 -~Ftdlfdy~P~tali~~~ifc~HGgLspsi~t--ld~~r~~dr--~~-----evphe-gpmcDlLwsdpddr~gwg~sp 223 (319)
T KOG0371|consen 155 -YFTDLFDYLPLTALIESKIFCLHGGLSPSIDT--LDLIRLLDR--IQ-----EVPHE-GPMCDLLWSDPDDRCGWGISP 223 (319)
T ss_pred -HhhhhhhccchHhhhccceeeccCCcCcccch--HHHHHHHHH--hh-----cccCC-CChhheeccCcccCCCCCCCC
Confidence 1223455589888787 555569999998321 111111111 11 11111 112467787643221
Q ss_pred --hhhcchHHHHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccC--CCcceEEEEeCCCcEEEEecCC
Q 041373 287 --EKKCDCSALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCY--DGLPEVLEINGNSELLVLTANP 361 (395)
Q Consensus 287 --~~~~~~~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~--~G~lt~L~I~~~~~~~v~~~~~ 361 (395)
+.-...+.+...+..-.+.+.+-+.|.-+.+|++-....+++.|.+.+.+ || +++.++++++......+++-+|
T Consensus 224 rgag~tfg~di~~~fn~~n~lslisRahqlvm~g~nW~~~~~~vtiFSapny-cYrcgn~a~i~e~d~~~~~~f~q~~p 301 (319)
T KOG0371|consen 224 RGAGYTFGQDISEQFNHKNGLSLISRAHQLVMEGYNWYHLWNVVTIFSAPNY-CYRCGNQAAIMERDDTKNYDFLQFDP 301 (319)
T ss_pred CCCCcccchhhHHHhhccCCchHhHHHHHHHhcccceeeecceeEEccCCch-hhccccHHHHhhhhhccCcceEEecC
Confidence 11222344555555556788899999999889877666667888876644 43 5677888888878888888887
No 29
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=99.87 E-value=7.2e-23 Score=199.93 Aligned_cols=284 Identities=17% Similarity=0.162 Sum_probs=175.1
Q ss_pred CCCCchhHHHHHHHHHHHhhhcCCccCCCCCCCCCCCCCCCCCCCCCCCeEEEEecCCCCHHHHHHHHHHhCCCCCCCCC
Q 041373 10 LCKNVPSLLSSFVDTFVDFTVSGGLFLPNPDPKTSQNVREPTTRLPRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQW 89 (395)
Q Consensus 10 ~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w 89 (395)
.|+.+..+++.|-.+-+-+.+---..+..+.+...+.|......-.....+.||||+||.+++|.-+|.+.|++..+.
T Consensus 117 ~~~~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~n-- 194 (631)
T KOG0377|consen 117 RKNHIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSN-- 194 (631)
T ss_pred CchHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCC--
Confidence 455555666666444332221111112222233444444444444556679999999999999999999999988765
Q ss_pred CCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcchhhhhhhhccccccchhhhhhhhhhhhcCcc
Q 041373 90 TGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNK 169 (395)
Q Consensus 90 ~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~ 169 (395)
-+||+||+||||.+|+|||..|+.+..- +|..+++.|||||..+++..|.|..+- ...| ..+
T Consensus 195 -----pYvFNGDFVDRGk~siEvLmiL~a~~lv---~P~~~~LNRGNHED~mmNlRYGF~kEv-~~KY------k~~--- 256 (631)
T KOG0377|consen 195 -----PYVFNGDFVDRGKRSIEVLMILFALYLV---YPNAVHLNRGNHEDHMMNLRYGFIKEV-ESKY------KRH--- 256 (631)
T ss_pred -----CeeecCchhhccccchhhHHHHHHHHhc---CchhhhccCCchHHHHHHHHHhHHHHH-HHHh------hhc---
Confidence 3999999999999999999999998764 899999999999998888544443210 0001 000
Q ss_pred ccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHHHHhhcCceEEEeC-CEEEEecCCCCCccccCh
Q 041373 170 MKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVG-DSVFVHGGLLKQHVEYGL 248 (395)
Q Consensus 170 ~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~L~~lP~~~~~~-~~lfvHAGl~p~~~~~~l 248 (395)
..++.+ ...++++-||+.-.++ ++++||||++.. -.+
T Consensus 257 ---------------------------------~k~Ilr------~leevy~WLPi~tiid~~ilvvHGGiSd~---Tdl 294 (631)
T KOG0377|consen 257 ---------------------------------GKRILR------FLEEVYRWLPIGTIIDSRILVVHGGISDS---TDL 294 (631)
T ss_pred ---------------------------------ccHHHH------HHHHHHHhcchhhhcccceEEEecCcccc---hhH
Confidence 111111 2346777899998887 577789999765 223
Q ss_pred hhhhHHHHHH----HhcccCC-CCCCCc---CC------CCcccccccccch---h-------hhcchHHHHHHHhcCCC
Q 041373 249 ERINREVRDW----INGLMGK-SAPGYC---KG------RHAVVWLRKFSDE---E-------KKCDCSALEHALATIPG 304 (395)
Q Consensus 249 e~~n~~~~~w----i~~~~~~-~~p~~~---~~------~~~~lW~R~~~~~---~-------~~~~~~~l~~~L~~~~g 304 (395)
+-+....+.- ++.+..+ ..-+.. .+ .-+++|+.+.... + --+..+-...+|+.. +
T Consensus 295 ~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~-~ 373 (631)
T KOG0377|consen 295 DLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKH-R 373 (631)
T ss_pred HHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHHh-C
Confidence 2222211111 1111100 000000 00 1256787764332 0 012335567788875 8
Q ss_pred CcEEEEcccCCCCCcccccCCcEEEEecCCcccc-CCCcceEEEEeCCCcEEE
Q 041373 305 VKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGC-YDGLPEVLEINGNSELLV 356 (395)
Q Consensus 305 ~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~-~~G~lt~L~I~~~~~~~v 356 (395)
.+.+|..|...++|+....++++++|.+.+.|+- +.++-+++.+.......|
T Consensus 374 l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~Phf 426 (631)
T KOG0377|consen 374 LSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHF 426 (631)
T ss_pred ceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchH
Confidence 8999999999999998888999999997665532 234556666665333333
No 30
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=99.86 E-value=3.5e-22 Score=191.09 Aligned_cols=225 Identities=20% Similarity=0.291 Sum_probs=148.2
Q ss_pred CCCCCCCeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEE
Q 041373 52 TRLPRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFI 131 (395)
Q Consensus 52 ~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~ 131 (395)
..+.-..+|.|+|||||||.+|++|++.-|- ++ +++++|||||||||..|+|++-+|..||.. +|+.++
T Consensus 82 nmi~v~APiTVCGDIHGQf~DLmKLFEVGG~-PA-------~t~YLFLGDYVDRGyFSiECvlYLwsLKi~---yp~tl~ 150 (517)
T KOG0375|consen 82 NMIEVEAPITVCGDIHGQFFDLMKLFEVGGS-PA-------NTRYLFLGDYVDRGYFSIECVLYLWSLKIN---YPKTLF 150 (517)
T ss_pred ceEeccCCeeEecccchHHHHHHHHHHccCC-cc-------cceeEeeccccccceeeeehHHHHHHHhcC---CCCeEE
Confidence 3455567899999999999999999986553 33 357999999999999999999999999997 899999
Q ss_pred EeCCCcchhhhhhhhccccccchhhhhhhhhhhhcCccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCC
Q 041373 132 TMNGNHEIMNIEADFRYATEMGLKEFEDWANWYCIGNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRP 211 (395)
Q Consensus 132 ~l~GNHE~~~l~~~~~y~~~~~~~~~~~~~~w~~~g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p 211 (395)
++|||||+..+...|-|..+.. . +|. .++-
T Consensus 151 lLRGNHECrHLT~YFTFKqEc~-------------------i----------------KYs-----------e~vY---- 180 (517)
T KOG0375|consen 151 LLRGNHECRHLTEYFTFKQECK-------------------I----------------KYS-----------ERVY---- 180 (517)
T ss_pred EecCCcchhhhHhHhhHHHHHh-------------------H----------------hcc-----------HHHH----
Confidence 9999999998874332221100 0 000 0000
Q ss_pred CchHHHHHhhcCceEEEeC-CEEEEecCCCCCccccChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccch----
Q 041373 212 DGPIARRFLSENTTVLVVG-DSVFVHGGLLKQHVEYGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDE---- 286 (395)
Q Consensus 212 ~~~~~~~~L~~lP~~~~~~-~~lfvHAGl~p~~~~~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~---- 286 (395)
+...+-+..||++...+ .|++||||++|+. ..|++++...+ .+ .|..+.-..+++|..+-.+-
T Consensus 181 --daCmesFd~LPLAAlmNqQflCVHGGlSPEi--~tl~DIr~l~R--F~------EpPa~GpmCDLLWsDPlEdfgnek 248 (517)
T KOG0375|consen 181 --DACMESFDCLPLAALMNQQFLCVHGGLSPEI--HTLDDIRKLDR--FK------EPPAFGPMCDLLWSDPLEDFGNEK 248 (517)
T ss_pred --HHHHHHhccchHHHHhcCceEEecCCCCccc--ccHHHHHhhhh--cc------CCCccCcchhhhccChhhhccccc
Confidence 12345677899988776 6999999999983 45666544221 11 22222234688998753211
Q ss_pred -h----hh--cch------HHHHHHHhcCCCCcEEEEcccCCCCCcccccCCc------EEEEecCCccc-cCCCcceEE
Q 041373 287 -E----KK--CDC------SALEHALATIPGVKRMIMGHTIQEKGINAVCDNR------AIRIDVGLSRG-CYDGLPEVL 346 (395)
Q Consensus 287 -~----~~--~~~------~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~------~i~IDtG~~~g-~~~G~lt~L 346 (395)
. .+ ..| .+.=++|+. .+.--||+.|.+|..|+..+...+ +|.|.+...|- .|+++.++|
T Consensus 249 ~~e~f~hNsvRGCSyfysy~A~C~FLq~-nnLLSIiRAHEAQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvL 327 (517)
T KOG0375|consen 249 TSEHFTHNSVRGCSYFYSYPAVCEFLQN-NNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVL 327 (517)
T ss_pred cccccccCccccccceechHHHHHHHHh-CCchhhhhhhhhhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHh
Confidence 0 00 123 244466766 367789999999987765433322 46776554331 246777777
Q ss_pred EEeC
Q 041373 347 EING 350 (395)
Q Consensus 347 ~I~~ 350 (395)
..++
T Consensus 328 KYEn 331 (517)
T KOG0375|consen 328 KYEN 331 (517)
T ss_pred hhhc
Confidence 6664
No 31
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=99.65 E-value=5e-16 Score=155.29 Aligned_cols=270 Identities=16% Similarity=0.221 Sum_probs=178.6
Q ss_pred hHHHHHHHHHHHhhhcCCccCCCCCC---------CCCCCCCCCCCCCCCCCeEEEEecCCCCHHHHHHHHHHhCCCCCC
Q 041373 16 SLLSSFVDTFVDFTVSGGLFLPNPDP---------KTSQNVREPTTRLPRVDRLIAIGDLHGDLEKSKQALRLAGLINGS 86 (395)
Q Consensus 16 ~~~~~f~~~~~~~~~~~g~~~~~~~~---------~~~~~~~~~~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~ 86 (395)
.+...|+.++...+..+ ..+++... .....++.+...+|...++.++||+||++.++..++...|.++..
T Consensus 164 kvt~e~vk~~~~~~~~~-~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t 242 (476)
T KOG0376|consen 164 KVTLEFVKTLMEVFKNQ-KKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSET 242 (476)
T ss_pred hhhHHHHHHHHHhhhcc-cccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCc
Confidence 45678999998777666 66666421 123334445556889999999999999999999999999988765
Q ss_pred CCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcchhhhhhhhccccccchhhhhhhhhhhhc
Q 041373 87 DQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIMNIEADFRYATEMGLKEFEDWANWYCI 166 (395)
Q Consensus 87 ~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE~~~l~~~~~y~~~~~~~~~~~~~~w~~~ 166 (395)
. .++|.||++|||..|.+++..++..+.. +|.++++++||||.-.++..|.|...- .+
T Consensus 243 ~-------~ylfngdfv~rgs~s~e~~~~~~~~kl~---~pn~~fl~rgn~Es~~m~~iy~f~~e~---~~--------- 300 (476)
T KOG0376|consen 243 N-------PYLFNGDFVDRGSWSVEVILTLFAFKLL---YPNNFFLLRGNHESDNMNKIYGFEGEV---KA--------- 300 (476)
T ss_pred c-------cccccCceeeecccceeeeeeehhhccc---CCcceeeccCCccchHHHHHhCCCcch---hh---------
Confidence 4 5999999999999999999999888876 899999999999988877554333210 00
Q ss_pred CccccccccCCCCCCcccCCCchhhhhhhHhhhhHHHHHHHHhCCCchHHHHHhhcCceEEEeCC-EEEEecCCCCCccc
Q 041373 167 GNKMKSLCVGLEKPKDLFSGIPLAFKSMAKEYHNGVRARIAALRPDGPIARRFLSENTTVLVVGD-SVFVHGGLLKQHVE 245 (395)
Q Consensus 167 g~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~L~~lP~~~~~~~-~lfvHAGl~p~~~~ 245 (395)
+..+.+.. ...+-+.-||+...+++ ++.+|||+. .-..
T Consensus 301 --------------------------------------kyte~~~~--~f~~~f~~LPl~~~i~~~~~~~hgglf-~~~~ 339 (476)
T KOG0376|consen 301 --------------------------------------KYTEEMFN--LFSEVFIWLPLAHLINNKVLVMHGGLF-SPDG 339 (476)
T ss_pred --------------------------------------hhHHHHHH--hhhhhhccccchhhhcCceEEEecCcC-CCCC
Confidence 00000000 11134567999998875 666699983 3333
Q ss_pred cChhhhhHHHHHHHhcccCCCCCCCcCCCCcccccccccch---------hhhcchHHHHHHHhcCCCCcEEEEcccCCC
Q 041373 246 YGLERINREVRDWINGLMGKSAPGYCKGRHAVVWLRKFSDE---------EKKCDCSALEHALATIPGVKRMIMGHTIQE 316 (395)
Q Consensus 246 ~~le~~n~~~~~wi~~~~~~~~p~~~~~~~~~lW~R~~~~~---------~~~~~~~~l~~~L~~~~g~~~vV~GHT~~~ 316 (395)
..++++....+. .+.|+. -....++|+.++-.. ...+..+....+|.. .+.+.||.||....
T Consensus 340 v~l~d~r~i~r~-------~~~~~~-~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~-n~l~~i~rshe~~d 410 (476)
T KOG0376|consen 340 VTLEDFRNIDRF-------EQPPEE-GLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQD-NNLDKIIRSHEVKD 410 (476)
T ss_pred ccHHHHHhhhhc-------cCCccc-ccccccccCCCccccCCCccccCceeeeCCCchhhHHhh-cchHHHhhccccCC
Confidence 556665443322 112211 123567787654221 011333444566665 48899999999998
Q ss_pred CCcccccCCcEEEEecCCccccC--CCcceEEEEeC-CCcEEEEec
Q 041373 317 KGINAVCDNRAIRIDVGLSRGCY--DGLPEVLEING-NSELLVLTA 359 (395)
Q Consensus 317 ~gi~~~~~~~~i~IDtG~~~g~~--~G~lt~L~I~~-~~~~~v~~~ 359 (395)
.|+....+++++.+.+ +..+|- +|.-+++.++. +....+++.
T Consensus 411 ~gy~~eh~g~l~tvfs-apnycd~~~n~ga~i~~~~~~~~p~~~~~ 455 (476)
T KOG0376|consen 411 EGYEVEHSGKLITVFS-APNYCDQMGNKGAFIHLEPDDLTPNFYTF 455 (476)
T ss_pred CceeeecCCcEEEEec-CcchhhhcCCcceEEEecCCCCccceeec
Confidence 8998888999888864 445453 45556666664 334444443
No 32
>PRK09453 phosphodiesterase; Provisional
Probab=99.46 E-value=1.8e-12 Score=117.43 Aligned_cols=68 Identities=31% Similarity=0.437 Sum_probs=53.3
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCC--------hHHHHHHHHHHHHHHhhcCCe
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDD--------EIKILYLLEKLKREAEKSGGK 129 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~--------s~evl~~l~~l~~~a~~~~~~ 129 (395)
||+.+|||+||++.+++++++.+.... .+.+|++||++|+|+. +.++++.+.++ +.+
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~--------~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~ 65 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSG--------ADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY-------ADK 65 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcC--------CCEEEEcccccccCcCCCCccccCHHHHHHHHHhc-------CCc
Confidence 689999999999999999988763222 2479999999999873 56677666554 236
Q ss_pred EEEeCCCcchh
Q 041373 130 FITMNGNHEIM 140 (395)
Q Consensus 130 v~~l~GNHE~~ 140 (395)
+++++||||..
T Consensus 66 v~~V~GNhD~~ 76 (182)
T PRK09453 66 IIAVRGNCDSE 76 (182)
T ss_pred eEEEccCCcch
Confidence 99999999964
No 33
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.38 E-value=7.3e-12 Score=110.80 Aligned_cols=64 Identities=27% Similarity=0.416 Sum_probs=48.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCc
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNH 137 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNH 137 (395)
||+.+|||+||+..+++.+++.+..... .+.++++||++ +.++++.+.++ +.++++++|||
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~-------~d~ii~~GD~~-----~~~~~~~l~~~-------~~~~~~V~GN~ 61 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESN-------VDLVIHAGDLT-----SPFVLKEFEDL-------AAKVIAVRGNN 61 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccC-------CCEEEEcCCCC-----CHHHHHHHHHh-------CCceEEEccCC
Confidence 6899999999999887777766543311 24699999999 45677776654 22589999999
Q ss_pred chh
Q 041373 138 EIM 140 (395)
Q Consensus 138 E~~ 140 (395)
|..
T Consensus 62 D~~ 64 (158)
T TIGR00040 62 DGE 64 (158)
T ss_pred Cch
Confidence 963
No 34
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.22 E-value=2.5e-10 Score=100.33 Aligned_cols=59 Identities=32% Similarity=0.409 Sum_probs=47.3
Q ss_pred eEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcc
Q 041373 59 RLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHE 138 (395)
Q Consensus 59 ~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE 138 (395)
|+.+|||+||+...+.++++.+.. . +.+|++||++++++... +. ....+++++||||
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~---~-------d~ii~~GD~~~~~~~~~--------~~-----~~~~~~~V~GNhD 57 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD---V-------DLIIHAGDVLYPGPLNE--------LE-----LKAPVIAVRGNCD 57 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC---C-------CEEEECCccccccccch--------hh-----cCCcEEEEeCCCC
Confidence 589999999999999999987643 1 36999999999998665 11 2347899999999
Q ss_pred hh
Q 041373 139 IM 140 (395)
Q Consensus 139 ~~ 140 (395)
..
T Consensus 58 ~~ 59 (155)
T cd00841 58 GE 59 (155)
T ss_pred Cc
Confidence 63
No 35
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.14 E-value=8e-10 Score=96.36 Aligned_cols=61 Identities=28% Similarity=0.515 Sum_probs=45.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCc
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNH 137 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNH 137 (395)
||+++|||+|++...+.++++.+. + .+.+|++||++| ..++++.+.+. ++++++|||
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~~---~-------~d~vi~~GDi~~----~~~~~~~~~~~---------~~~~v~GNH 57 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYIN---E-------PDFVIILGDIFD----PEEVLELLRDI---------PVYVVRGNH 57 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHHT---T-------ESEEEEES-SCS----HHHHHHHHHHH---------EEEEE--CC
T ss_pred CEEEEEeCCCCChhHHHHHHHHhc---C-------CCEEEECCCchh----HHHHHHHHhcC---------CEEEEeCCc
Confidence 799999999999999999999872 1 247999999999 36666666444 799999999
Q ss_pred chhh
Q 041373 138 EIMN 141 (395)
Q Consensus 138 E~~~ 141 (395)
|...
T Consensus 58 D~~~ 61 (156)
T PF12850_consen 58 DNWA 61 (156)
T ss_dssp HSTH
T ss_pred cccc
Confidence 9644
No 36
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.98 E-value=1.1e-08 Score=96.30 Aligned_cols=63 Identities=24% Similarity=0.409 Sum_probs=45.2
Q ss_pred eEEEEecCCCCHHHHH-HHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCc
Q 041373 59 RLIAIGDLHGDLEKSK-QALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNH 137 (395)
Q Consensus 59 ~i~vigDiHG~~~~l~-~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNH 137 (395)
||++||||||++.... +.++..+ .+.++++||+++ .+.++++.+.++ +..+++++|||
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~~-----------pD~Vl~~GDi~~---~~~~~~~~l~~l-------~~p~~~V~GNH 60 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLLQ-----------PDLVLFVGDFGN---ESVQLVRAISSL-------PLPKAVILGNH 60 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhccC-----------CCEEEECCCCCc---ChHHHHHHHHhC-------CCCeEEEcCCC
Confidence 7999999999987632 3333221 247999999986 356676666554 34689999999
Q ss_pred chhhh
Q 041373 138 EIMNI 142 (395)
Q Consensus 138 E~~~l 142 (395)
|.+..
T Consensus 61 D~~~~ 65 (238)
T cd07397 61 DAWYD 65 (238)
T ss_pred ccccc
Confidence 98664
No 37
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.97 E-value=1.4e-08 Score=96.16 Aligned_cols=70 Identities=23% Similarity=0.244 Sum_probs=47.3
Q ss_pred CeEEEEecCCCCH---H---HHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCC-------CCChHHHHHHHHHHHHHHh
Q 041373 58 DRLIAIGDLHGDL---E---KSKQALRLAGLINGSDQWTGGTATVVQIGDVLDR-------GDDEIKILYLLEKLKREAE 124 (395)
Q Consensus 58 ~~i~vigDiHG~~---~---~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDr-------G~~s~evl~~l~~l~~~a~ 124 (395)
|++++|||+|... . .+.+.|+... ...+.++++||++|. .+...++++.+.++..
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~---------~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~--- 68 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEA---------RQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD--- 68 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhh---------ccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH---
Confidence 6899999999542 2 3334443211 113479999999985 2335677777777753
Q ss_pred hcCCeEEEeCCCcchh
Q 041373 125 KSGGKFITMNGNHEIM 140 (395)
Q Consensus 125 ~~~~~v~~l~GNHE~~ 140 (395)
.+..+++++||||..
T Consensus 69 -~g~~v~~v~GNHD~~ 83 (241)
T PRK05340 69 -SGVPCYFMHGNRDFL 83 (241)
T ss_pred -cCCeEEEEeCCCchh
Confidence 446899999999964
No 38
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.90 E-value=3.7e-08 Score=89.21 Aligned_cols=58 Identities=21% Similarity=0.251 Sum_probs=40.7
Q ss_pred eEEEEecCC-CCHH-----HHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEE
Q 041373 59 RLIAIGDLH-GDLE-----KSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFIT 132 (395)
Q Consensus 59 ~i~vigDiH-G~~~-----~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~ 132 (395)
+|.||||+| |... .+.++++. . +.+.+|++||+++ .++++++.++. .++++
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~--------~~d~iih~GDi~~-----~~~~~~l~~~~-------~~~~~ 57 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---G--------KIQHVLCTGNLCS-----KETYDYLKTIA-------PDVHI 57 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---C--------CCCEEEECCCCCC-----HHHHHHHHhhC-------CceEE
Confidence 488999999 5533 24444432 1 1246999999987 77777776652 25899
Q ss_pred eCCCcch
Q 041373 133 MNGNHEI 139 (395)
Q Consensus 133 l~GNHE~ 139 (395)
++||||.
T Consensus 58 V~GN~D~ 64 (178)
T cd07394 58 VRGDFDE 64 (178)
T ss_pred EECCCCc
Confidence 9999995
No 39
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.88 E-value=1.6e-08 Score=87.03 Aligned_cols=60 Identities=28% Similarity=0.496 Sum_probs=40.1
Q ss_pred eEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChH--HHHHHHHHHHHHHhhcCCeEEEeCCC
Q 041373 59 RLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEI--KILYLLEKLKREAEKSGGKFITMNGN 136 (395)
Q Consensus 59 ~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~--evl~~l~~l~~~a~~~~~~v~~l~GN 136 (395)
|+++|||+||+.. .+ ... ..+.+|++||+++++..+. ++++++.++. ...+++++||
T Consensus 1 ~i~~isD~H~~~~----~~---~~~--------~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~------~~~~~~v~GN 59 (135)
T cd07379 1 RFVCISDTHSRHR----TI---SIP--------DGDVLIHAGDLTERGTLEELQKFLDWLKSLP------HPHKIVIAGN 59 (135)
T ss_pred CEEEEeCCCCCCC----cC---cCC--------CCCEEEECCCCCCCCCHHHHHHHHHHHHhCC------CCeEEEEECC
Confidence 5899999999987 11 111 2347999999999886532 3444444431 1236789999
Q ss_pred cch
Q 041373 137 HEI 139 (395)
Q Consensus 137 HE~ 139 (395)
||.
T Consensus 60 HD~ 62 (135)
T cd07379 60 HDL 62 (135)
T ss_pred CCC
Confidence 995
No 40
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.76 E-value=1.9e-07 Score=83.81 Aligned_cols=66 Identities=29% Similarity=0.435 Sum_probs=44.8
Q ss_pred EEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCCh-HHHHHHHHHHHHHHhhcCCeEEEeCCCcc
Q 041373 60 LIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDE-IKILYLLEKLKREAEKSGGKFITMNGNHE 138 (395)
Q Consensus 60 i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s-~evl~~l~~l~~~a~~~~~~v~~l~GNHE 138 (395)
|+++|||||++..+.. ..+.-. ..+.+|++||+++++... .+.++.+.+ .+..+++++||||
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~--------~~D~vv~~GDl~~~~~~~~~~~~~~l~~-------~~~p~~~v~GNHD 63 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAE--------EADAVIVAGDITNFGGKEAAVEINLLLA-------IGVPVLAVPGNCD 63 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhcc--------CCCEEEECCCccCcCCHHHHHHHHHHHh-------cCCCEEEEcCCCC
Confidence 5789999999988876 221111 124799999999998763 333333322 3457999999999
Q ss_pred hhhh
Q 041373 139 IMNI 142 (395)
Q Consensus 139 ~~~l 142 (395)
....
T Consensus 64 ~~~~ 67 (188)
T cd07392 64 TPEI 67 (188)
T ss_pred CHHH
Confidence 7543
No 41
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=98.76 E-value=2e-08 Score=86.03 Aligned_cols=76 Identities=20% Similarity=0.232 Sum_probs=53.0
Q ss_pred CeEEEEecCCCCHHHH---HHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHH--HHHHHHHhhcCCeEEE
Q 041373 58 DRLIAIGDLHGDLEKS---KQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLL--EKLKREAEKSGGKFIT 132 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l---~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l--~~l~~~a~~~~~~v~~ 132 (395)
+||++|||+|+..... ...+........ .+.+|++||++|++..+....... ..... ..+..+++
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~-------~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 70 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENK-------PDFIIFLGDLVDGGNPSEEWRAQFWFFIRLL---NPKIPVYF 70 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTT-------TSEEEEESTSSSSSSHHHHHHHHHHHHHHHH---HTTTTEEE
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCC-------CCEEEeeccccccccccccchhhhccchhhh---hccccccc
Confidence 5899999999999877 233322211121 247999999999999888877654 22222 25679999
Q ss_pred eCCCcchhhhh
Q 041373 133 MNGNHEIMNIE 143 (395)
Q Consensus 133 l~GNHE~~~l~ 143 (395)
++||||.....
T Consensus 71 ~~GNHD~~~~~ 81 (200)
T PF00149_consen 71 ILGNHDYYSGN 81 (200)
T ss_dssp EE-TTSSHHHH
T ss_pred cccccccceec
Confidence 99999987654
No 42
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.72 E-value=3.8e-08 Score=92.25 Aligned_cols=72 Identities=19% Similarity=0.253 Sum_probs=57.8
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCC
Q 041373 57 VDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGN 136 (395)
Q Consensus 57 ~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GN 136 (395)
.+||.+||||||++.+++++++.+.-.. .+.+|++||++++|+...++..++..+.. .+..+++++||
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~--------~D~vv~~GDl~~~g~~~~~~~~~l~~l~~----l~~pv~~V~GN 71 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETG--------ADAIVLIGNLLPKAAKSEDYAAFFRILGE----AHLPTFYVPGP 71 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcC--------CCEEEECCCCCCCCCCHHHHHHHHHHHHh----cCCceEEEcCC
Confidence 4789999999999999999998653211 24699999999999877777777777753 24479999999
Q ss_pred cchh
Q 041373 137 HEIM 140 (395)
Q Consensus 137 HE~~ 140 (395)
||..
T Consensus 72 hD~~ 75 (224)
T cd07388 72 QDAP 75 (224)
T ss_pred CChH
Confidence 9975
No 43
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.59 E-value=1.9e-06 Score=77.53 Aligned_cols=54 Identities=22% Similarity=0.303 Sum_probs=38.9
Q ss_pred CCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCCcc-eEEEEeCC-CcEEEEecC
Q 041373 304 GVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLP-EVLEINGN-SELLVLTAN 360 (395)
Q Consensus 304 g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~l-t~L~I~~~-~~~~v~~~~ 360 (395)
+.+.+|+|||+.+. +. ..++ ++.|.-|+..++-++.. +++.++.+ .++++...+
T Consensus 109 ~~Dvli~GHTH~p~-~~-~~~~-i~~vNPGS~s~pr~~~~~sy~il~~~~~~~~~~~~~ 164 (172)
T COG0622 109 GADVLIFGHTHKPV-AE-KVGG-ILLVNPGSVSGPRGGNPASYAILDVDNLEVEVLFLE 164 (172)
T ss_pred CCCEEEECCCCccc-EE-EECC-EEEEcCCCcCCCCCCCCcEEEEEEcCCCEEEEEEee
Confidence 68999999999984 32 3343 79999999988877766 77777753 455555443
No 44
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.46 E-value=2.1e-06 Score=80.49 Aligned_cols=69 Identities=25% Similarity=0.255 Sum_probs=44.2
Q ss_pred eEEEEecCCCC------------HHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCCh--HHHHHHHHHHHHHHh
Q 041373 59 RLIAIGDLHGD------------LEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDE--IKILYLLEKLKREAE 124 (395)
Q Consensus 59 ~i~vigDiHG~------------~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s--~evl~~l~~l~~~a~ 124 (395)
|+++|+|+|=. ...+.++++.+.-.. ...+.+|++||+++.+... ..+++.+.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~------~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~------ 68 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALH------PRPDLVLVTGDLTDDGSPESYERLRELLAA------ 68 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcC------CCCCEEEECccCCCCCCHHHHHHHHHHHhh------
Confidence 58999999933 345677776543221 1124699999999987532 122222222
Q ss_pred hcCCeEEEeCCCcchh
Q 041373 125 KSGGKFITMNGNHEIM 140 (395)
Q Consensus 125 ~~~~~v~~l~GNHE~~ 140 (395)
.+..+++++||||..
T Consensus 69 -~~~p~~~v~GNHD~~ 83 (240)
T cd07402 69 -LPIPVYLLPGNHDDR 83 (240)
T ss_pred -cCCCEEEeCCCCCCH
Confidence 345789999999964
No 45
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.39 E-value=8.7e-06 Score=78.55 Aligned_cols=72 Identities=18% Similarity=0.186 Sum_probs=46.5
Q ss_pred CCCeEEEEecCC-C-----------CHHHHHHHHHHhCCC-CCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHH
Q 041373 56 RVDRLIAIGDLH-G-----------DLEKSKQALRLAGLI-NGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKRE 122 (395)
Q Consensus 56 ~~~~i~vigDiH-G-----------~~~~l~~ll~~~~~~-~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~ 122 (395)
..++++.|+|+| . ..+.|.++++.+.-. .. .+.+|+.||++|.|. ..+.-.+...++.
T Consensus 13 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~-------~D~vvitGDl~~~~~-~~~~~~~~~~l~~- 83 (275)
T PRK11148 13 ARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHE-------FDLIVATGDLAQDHS-SEAYQHFAEGIAP- 83 (275)
T ss_pred CCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCC-------CCEEEECCCCCCCCC-HHHHHHHHHHHhh-
Confidence 457999999999 1 135677777665322 11 236999999999874 2222222222222
Q ss_pred HhhcCCeEEEeCCCcch
Q 041373 123 AEKSGGKFITMNGNHEI 139 (395)
Q Consensus 123 a~~~~~~v~~l~GNHE~ 139 (395)
.+..+++++||||.
T Consensus 84 ---l~~Pv~~v~GNHD~ 97 (275)
T PRK11148 84 ---LRKPCVWLPGNHDF 97 (275)
T ss_pred ---cCCcEEEeCCCCCC
Confidence 34579999999996
No 46
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=98.38 E-value=1.4e-05 Score=83.54 Aligned_cols=148 Identities=18% Similarity=0.246 Sum_probs=82.0
Q ss_pred hHHHHHhhcC-ceEEEeCCEEEEecCCCCCcc--------------ccC-hhhhhHHHHHHHhc-ccC--CCCCCC---c
Q 041373 214 PIARRFLSEN-TTVLVVGDSVFVHGGLLKQHV--------------EYG-LERINREVRDWING-LMG--KSAPGY---C 271 (395)
Q Consensus 214 ~~~~~~L~~l-P~~~~~~~~lfvHAGl~p~~~--------------~~~-le~~n~~~~~wi~~-~~~--~~~p~~---~ 271 (395)
..|.+||-+. -++...++.++-||.|+-.-. ... ++..+..++..... ... ....++ +
T Consensus 387 q~Hi~FL~~kGsmY~~~N~NLLfHGCIPl~edG~F~~~~i~g~~y~Gk~llD~~e~~~R~ay~~~~~~~~~~~~D~~WYL 466 (640)
T PF06874_consen 387 QRHIRFLYSKGSMYKIYNGNLLFHGCIPLNEDGSFKEVTIDGKTYSGKALLDFFERIIRRAYFDHDSEKDQYATDFMWYL 466 (640)
T ss_pred HHHHHHHHHcCCEEEEEcCceEEEeecccCCCCCeeEEEECCEeeccHHHHHHHHHHHHHHhhcCCcccccccCceEEee
Confidence 3567787766 567778899999999842200 001 34444444443311 111 112222 2
Q ss_pred C-CCCccccccc--------ccch---------------hhhcchHHHHHHHhcCCCCcEEEEcccCCCC--C-cccccC
Q 041373 272 K-GRHAVVWLRK--------FSDE---------------EKKCDCSALEHALATIPGVKRMIMGHTIQEK--G-INAVCD 324 (395)
Q Consensus 272 ~-~~~~~lW~R~--------~~~~---------------~~~~~~~~l~~~L~~~~g~~~vV~GHT~~~~--g-i~~~~~ 324 (395)
| ++.+|+..|. |..+ .....|..+-+.++--+...+||-||||+.. | -+..++
T Consensus 467 WcG~~SPLFGK~~MtTFERyFI~Dk~th~E~knpYY~l~~~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~ 546 (640)
T PF06874_consen 467 WCGPKSPLFGKDKMTTFERYFIADKETHKEPKNPYYKLREDEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKAN 546 (640)
T ss_pred ecCCCCCccchhHHHHHHHHHhcChhhccCCCCcchhhccCHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCC
Confidence 2 4556665552 1110 1113455555555443456699999999983 3 345789
Q ss_pred CcEEEEecCCccccC--CCcceEEEEeCCCcEEEEecCC
Q 041373 325 NRAIRIDVGLSRGCY--DGLPEVLEINGNSELLVLTANP 361 (395)
Q Consensus 325 ~~~i~IDtG~~~g~~--~G~lt~L~I~~~~~~~v~~~~~ 361 (395)
|+++.||.|.++++. +|-...--|-++-.++..+-.|
T Consensus 547 Gkl~VIDGGfskAYqk~TGIAGYTLiyNS~gl~L~~H~p 585 (640)
T PF06874_consen 547 GKLIVIDGGFSKAYQKTTGIAGYTLIYNSYGLQLVAHQP 585 (640)
T ss_pred CEEEEEcChhhhhhccccCccceEEEecCCcceeccCCC
Confidence 999999999998764 4554444444434455444433
No 47
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.35 E-value=1.3e-06 Score=80.75 Aligned_cols=36 Identities=25% Similarity=0.388 Sum_probs=24.2
Q ss_pred HHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCC
Q 041373 295 LEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGL 334 (395)
Q Consensus 295 l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~ 334 (395)
+.+.+.. .+.+.+|+|||+++. .. ..+ ....+++|+
T Consensus 181 ~~~~~~~-~~~~~~i~GH~H~~~-~~-~~~-~~~~~n~G~ 216 (217)
T cd07398 181 VARLARR-KGVDGVICGHTHRPA-LH-ELD-GKLYINLGD 216 (217)
T ss_pred HHHHHHh-cCCCEEEECCCCCCC-eE-EEC-CEEEEECCC
Confidence 3344444 478999999999984 32 223 357888886
No 48
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.34 E-value=8.7e-05 Score=68.76 Aligned_cols=76 Identities=28% Similarity=0.358 Sum_probs=56.7
Q ss_pred CCCeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCccc--CCCCChHHHHHH-HHHHHHHHhhcCCeEEE
Q 041373 56 RVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVL--DRGDDEIKILYL-LEKLKREAEKSGGKFIT 132 (395)
Q Consensus 56 ~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~v--DrG~~s~evl~~-l~~l~~~a~~~~~~v~~ 132 (395)
..||+.++.|+||..+.+.+++..+.-... +.+|+.||+. +.|+.....-.. +..++. .+..+++
T Consensus 2 ~~mkil~vtDlHg~~~~~~k~~~~~~~~~~--------D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~----~~~~v~a 69 (226)
T COG2129 2 KKMKILAVTDLHGSEDSLKKLLNAAADIRA--------DLLVIAGDLTYFHFGPKEVAEELNKLEALKE----LGIPVLA 69 (226)
T ss_pred CcceEEEEeccccchHHHHHHHHHHhhccC--------CEEEEecceehhhcCchHHHHhhhHHHHHHh----cCCeEEE
Confidence 368999999999999999999987764433 2699999999 888754433321 444443 4669999
Q ss_pred eCCCcchhhhh
Q 041373 133 MNGNHEIMNIE 143 (395)
Q Consensus 133 l~GNHE~~~l~ 143 (395)
++||.|...+-
T Consensus 70 vpGNcD~~~v~ 80 (226)
T COG2129 70 VPGNCDPPEVI 80 (226)
T ss_pred EcCCCChHHHH
Confidence 99999875543
No 49
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.31 E-value=1.6e-05 Score=72.84 Aligned_cols=42 Identities=19% Similarity=0.192 Sum_probs=29.6
Q ss_pred cEEEEeCcccCCCCCh---HHHHHHHHHHHHHHhhcCCeEEEeCCCcc
Q 041373 94 ATVVQIGDVLDRGDDE---IKILYLLEKLKREAEKSGGKFITMNGNHE 138 (395)
Q Consensus 94 ~~lv~lGD~vDrG~~s---~evl~~l~~l~~~a~~~~~~v~~l~GNHE 138 (395)
+.+|++||+++.+... .+.+..+.+.... .+..+++++||||
T Consensus 43 d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~---~~~p~~~~~GNHD 87 (199)
T cd07383 43 DLVVLTGDLITGENTNDNSTSALDKAVSPMID---RKIPWAATFGNHD 87 (199)
T ss_pred CEEEECCccccCCCCchHHHHHHHHHHHHHHH---cCCCEEEECccCC
Confidence 4699999999977653 4555544443221 3557899999999
No 50
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.26 E-value=5.1e-05 Score=79.48 Aligned_cols=83 Identities=17% Similarity=0.223 Sum_probs=49.3
Q ss_pred CCCCCCeEEEEecCC-CCH----HHHHHHHHHhC-CCCCCCCC-CCCCcEEEEeCcccCC-CCCh---------------
Q 041373 53 RLPRVDRLIAIGDLH-GDL----EKSKQALRLAG-LINGSDQW-TGGTATVVQIGDVLDR-GDDE--------------- 109 (395)
Q Consensus 53 ~~~~~~~i~vigDiH-G~~----~~l~~ll~~~~-~~~~~~~w-~~~~~~lv~lGD~vDr-G~~s--------------- 109 (395)
......++++|+|+| |.. ..+..+++.+. ..+. ... ....+.+|++||++|. |..+
T Consensus 239 ~~~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~-~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~ 317 (504)
T PRK04036 239 TKDEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGN-EEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQY 317 (504)
T ss_pred cCCCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCcc-chhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHH
Confidence 345668999999999 552 23444444332 2111 000 1224689999999994 3211
Q ss_pred HHHHHHHHHHHHHHhhcCCeEEEeCCCcchhh
Q 041373 110 IKILYLLEKLKREAEKSGGKFITMNGNHEIMN 141 (395)
Q Consensus 110 ~evl~~l~~l~~~a~~~~~~v~~l~GNHE~~~ 141 (395)
.++.++|.++. ..-.+++++||||...
T Consensus 318 ~~l~~~L~~L~-----~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 318 EAAAEYLKQIP-----EDIKIIISPGNHDAVR 344 (504)
T ss_pred HHHHHHHHhhh-----cCCeEEEecCCCcchh
Confidence 13455555553 2347999999999643
No 51
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.21 E-value=0.00013 Score=67.87 Aligned_cols=69 Identities=23% Similarity=0.371 Sum_probs=41.8
Q ss_pred eEEEEecCCCC----HHHHH----HHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChH---HHHHHHHHHHHHHhhcC
Q 041373 59 RLIAIGDLHGD----LEKSK----QALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEI---KILYLLEKLKREAEKSG 127 (395)
Q Consensus 59 ~i~vigDiHG~----~~~l~----~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~---evl~~l~~l~~~a~~~~ 127 (395)
+++++||+|-. ...+. .+++.+.-. ..+.+|++||++|.+.... ...+.+..+.. .+
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~--------~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~----~~ 69 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEAL--------NIAFVLHLGDIVDDGDNDAEWEAADKAFARLDK----AG 69 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHc--------CCCEEEECCCccCCCCCHHHHHHHHHHHHHHHH----cC
Confidence 68999999942 23332 333332111 1246999999999988433 22333344421 34
Q ss_pred CeEEEeCCCcch
Q 041373 128 GKFITMNGNHEI 139 (395)
Q Consensus 128 ~~v~~l~GNHE~ 139 (395)
-.+++++||||.
T Consensus 70 ~p~~~~~GNHD~ 81 (214)
T cd07399 70 IPYSVLAGNHDL 81 (214)
T ss_pred CcEEEECCCCcc
Confidence 578999999994
No 52
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.17 E-value=5.4e-06 Score=80.00 Aligned_cols=72 Identities=18% Similarity=0.121 Sum_probs=50.7
Q ss_pred CCCCeEEEEecCCCC----HHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCC--CChHHHHHHHHHHHHHHhhcCC
Q 041373 55 PRVDRLIAIGDLHGD----LEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRG--DDEIKILYLLEKLKREAEKSGG 128 (395)
Q Consensus 55 ~~~~~i~vigDiHG~----~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG--~~s~evl~~l~~l~~~a~~~~~ 128 (395)
++++|+++++|||.. ...+.++++.+.-.. .+.+++.||++|.+ .+..++.+.+..++. +.
T Consensus 47 ~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~--------pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~-----~~ 113 (271)
T PRK11340 47 AAPFKILFLADLHYSRFVPLSLISDAIALGIEQK--------PDLILLGGDYVLFDMPLNFSAFSDVLSPLAE-----CA 113 (271)
T ss_pred CCCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcC--------CCEEEEccCcCCCCccccHHHHHHHHHHHhh-----cC
Confidence 456899999999976 555677776543211 24799999999943 333456666666653 23
Q ss_pred eEEEeCCCcch
Q 041373 129 KFITMNGNHEI 139 (395)
Q Consensus 129 ~v~~l~GNHE~ 139 (395)
.++++.||||.
T Consensus 114 pv~~V~GNHD~ 124 (271)
T PRK11340 114 PTFACFGNHDR 124 (271)
T ss_pred CEEEecCCCCc
Confidence 69999999996
No 53
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.16 E-value=3.4e-06 Score=78.20 Aligned_cols=71 Identities=27% Similarity=0.318 Sum_probs=50.8
Q ss_pred CCeEEEEecCCCCHH----HHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChH-HHHHHHHHHHHHHhhcCCeEE
Q 041373 57 VDRLIAIGDLHGDLE----KSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEI-KILYLLEKLKREAEKSGGKFI 131 (395)
Q Consensus 57 ~~~i~vigDiHG~~~----~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~-evl~~l~~l~~~a~~~~~~v~ 131 (395)
++|+++++|+|.... .+.++++.+.-.. .+.+++.||++|.+.... .+.+++..+. .+..++
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~--------~d~vl~~GD~~~~~~~~~~~~~~~l~~l~-----~~~~v~ 67 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALK--------PDLVVLTGDLVDGSVDVLELLLELLKKLK-----APLGVY 67 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccC--------CCEEEEcCcccCCcchhhHHHHHHHhccC-----CCCCEE
Confidence 468999999998743 6677776553221 246999999999987764 5555555542 345789
Q ss_pred EeCCCcchh
Q 041373 132 TMNGNHEIM 140 (395)
Q Consensus 132 ~l~GNHE~~ 140 (395)
+++||||..
T Consensus 68 ~v~GNHD~~ 76 (223)
T cd07385 68 AVLGNHDYY 76 (223)
T ss_pred EECCCcccc
Confidence 999999964
No 54
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.00 E-value=5.5e-06 Score=73.57 Aligned_cols=68 Identities=26% Similarity=0.221 Sum_probs=44.6
Q ss_pred EEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcch
Q 041373 60 LIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEI 139 (395)
Q Consensus 60 i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE~ 139 (395)
+.++||||+........+.. .... ...+.++++||+++++.....+. ++... ..+..+++++||||.
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~--~~~~-----~~~d~li~~GDi~~~~~~~~~~~-~~~~~-----~~~~~v~~v~GNHD~ 67 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLN--FPIA-----PDADILVLAGDIGYLTDAPRFAP-LLLAL-----KGFEPVIYVPGNHEF 67 (166)
T ss_pred CceEccccccCccccccccc--cCCC-----CCCCEEEECCCCCCCcchHHHHH-HHHhh-----cCCccEEEeCCCcce
Confidence 46899999998766555421 1111 12357999999999887655443 22211 134579999999997
Q ss_pred h
Q 041373 140 M 140 (395)
Q Consensus 140 ~ 140 (395)
.
T Consensus 68 ~ 68 (166)
T cd07404 68 Y 68 (166)
T ss_pred E
Confidence 5
No 55
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.00 E-value=1.3e-05 Score=75.61 Aligned_cols=68 Identities=22% Similarity=0.282 Sum_probs=46.8
Q ss_pred eEEEEecCCCCH------HHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEE
Q 041373 59 RLIAIGDLHGDL------EKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFIT 132 (395)
Q Consensus 59 ~i~vigDiHG~~------~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~ 132 (395)
||.+|+|+|.++ ..+.++++.+.-.. .+.+|+.||++++.+.+.++++.+.++ .+..+++
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~--------~d~vv~~GDl~~~~~~~~~~~~~l~~~------~~~pv~~ 66 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQK--------IDHLHIAGDISNDFQRSLPFIEKLQEL------KGIKVTF 66 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcC--------CCEEEECCccccchhhHHHHHHHHHHh------cCCcEEE
Confidence 589999999653 23555666543221 246999999999876666665555443 3457999
Q ss_pred eCCCcchh
Q 041373 133 MNGNHEIM 140 (395)
Q Consensus 133 l~GNHE~~ 140 (395)
++||||..
T Consensus 67 v~GNHD~~ 74 (239)
T TIGR03729 67 NAGNHDML 74 (239)
T ss_pred ECCCCCCC
Confidence 99999964
No 56
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=97.95 E-value=1.7e-05 Score=65.61 Aligned_cols=69 Identities=28% Similarity=0.341 Sum_probs=46.8
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcc
Q 041373 61 IAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHE 138 (395)
Q Consensus 61 ~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE 138 (395)
+++||+|+.............. .....+.+|++||+++.+....+.......... ..+..++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~------~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALA------AAEKPDFVLVLGDLVGDGPDPEEVLAAALALLL---LLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHh------cccCCCEEEECCcccCCCCCchHHHHHHHHHhh---cCCCCEEEeCCCce
Confidence 4799999999888775421110 112235799999999999887765544211111 25678999999999
No 57
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.95 E-value=2.9e-05 Score=74.24 Aligned_cols=72 Identities=19% Similarity=0.306 Sum_probs=45.8
Q ss_pred CeEEEEecCC-CC-----------HHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHH----HHHHHHHH
Q 041373 58 DRLIAIGDLH-GD-----------LEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKIL----YLLEKLKR 121 (395)
Q Consensus 58 ~~i~vigDiH-G~-----------~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl----~~l~~l~~ 121 (395)
||++.++|+| |. ...|..+++.+.-. ..+.+++.||++|+...+.+.. +++.+++.
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~--------~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~ 72 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAE--------QIDALLVAGDVFDTANPPAEAQELFNAFFRNLSD 72 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHc--------CCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 6899999999 32 23444555443211 1246999999999876554433 34444432
Q ss_pred HHhhcCCeEEEeCCCcchh
Q 041373 122 EAEKSGGKFITMNGNHEIM 140 (395)
Q Consensus 122 ~a~~~~~~v~~l~GNHE~~ 140 (395)
. .+-.++++.||||..
T Consensus 73 ~---~~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 73 A---NPIPIVVISGNHDSA 88 (253)
T ss_pred c---CCceEEEEccCCCCh
Confidence 1 125799999999964
No 58
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.93 E-value=2.6e-05 Score=77.72 Aligned_cols=75 Identities=25% Similarity=0.399 Sum_probs=47.6
Q ss_pred CeEEEEecCC-CC-----------HHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCC-CChHHHHHHHHH-HHHHH
Q 041373 58 DRLIAIGDLH-GD-----------LEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRG-DDEIKILYLLEK-LKREA 123 (395)
Q Consensus 58 ~~i~vigDiH-G~-----------~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG-~~s~evl~~l~~-l~~~a 123 (395)
||++.+||+| |. ...|.++++.+.-. ..+.+++.||++|+. +.+.+++.++.. +....
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~--------~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L 72 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAH--------GITTWIQLGDTFDVRKAITQNTMNFVREKIFDLL 72 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHc--------CCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHH
Confidence 6899999999 42 23445554443211 124799999999985 445555555544 22111
Q ss_pred hhcCCeEEEeCCCcchh
Q 041373 124 EKSGGKFITMNGNHEIM 140 (395)
Q Consensus 124 ~~~~~~v~~l~GNHE~~ 140 (395)
...+-.++++.||||..
T Consensus 73 ~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 73 KEAGITLHVLVGNHDMY 89 (340)
T ss_pred HHCCCeEEEEccCCCcc
Confidence 22466899999999964
No 59
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.85 E-value=5.3e-05 Score=72.80 Aligned_cols=73 Identities=27% Similarity=0.350 Sum_probs=48.4
Q ss_pred eEEEEecCC-CC------------HHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCC-hHHHHHHHHHHHHHHh
Q 041373 59 RLIAIGDLH-GD------------LEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDD-EIKILYLLEKLKREAE 124 (395)
Q Consensus 59 ~i~vigDiH-G~------------~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~-s~evl~~l~~l~~~a~ 124 (395)
|+++|||+| +. ...+.++++.+.-.. .+.+|++||+++.|.. +.+-++.+++.-..
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~--------~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~-- 71 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRES--------LDFVVQLGDIIDGDNARAEEALDAVLAILDR-- 71 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCC--------CCEEEECCCeecCCCchHHHHHHHHHHHHHh--
Confidence 789999999 22 456677777664322 2369999999998873 22334333333221
Q ss_pred hcCCeEEEeCCCcchhhh
Q 041373 125 KSGGKFITMNGNHEIMNI 142 (395)
Q Consensus 125 ~~~~~v~~l~GNHE~~~l 142 (395)
.+..+++++||||....
T Consensus 72 -l~~p~~~v~GNHD~~~~ 88 (267)
T cd07396 72 -LKGPVHHVLGNHDLYNP 88 (267)
T ss_pred -cCCCEEEecCccccccc
Confidence 34589999999997543
No 60
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=97.80 E-value=4.3e-05 Score=71.91 Aligned_cols=71 Identities=15% Similarity=0.219 Sum_probs=42.8
Q ss_pred EEEEecCCCCH---HHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCC-----CC--hHHHHHHHHHHHHHHhhcCCe
Q 041373 60 LIAIGDLHGDL---EKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRG-----DD--EIKILYLLEKLKREAEKSGGK 129 (395)
Q Consensus 60 i~vigDiHG~~---~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG-----~~--s~evl~~l~~l~~~a~~~~~~ 129 (395)
+++|||+|... +....+++.+.-... ..+.+|++||++|.. +. ..++.+.+..++. .+..
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~------~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~----~~~~ 70 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR------KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD----QGVP 70 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc------cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH----CCCe
Confidence 37899999543 222333332211100 124699999999952 11 2355666666643 3568
Q ss_pred EEEeCCCcchh
Q 041373 130 FITMNGNHEIM 140 (395)
Q Consensus 130 v~~l~GNHE~~ 140 (395)
+++++||||..
T Consensus 71 v~~v~GNHD~~ 81 (231)
T TIGR01854 71 CYFMHGNRDFL 81 (231)
T ss_pred EEEEcCCCchh
Confidence 99999999964
No 61
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.64 E-value=0.0001 Score=66.10 Aligned_cols=44 Identities=16% Similarity=0.125 Sum_probs=27.7
Q ss_pred cEEEEeCcccCCCCCh-HHHHHHH--HHHHHHHhhcCCeEEEeCCCcchhh
Q 041373 94 ATVVQIGDVLDRGDDE-IKILYLL--EKLKREAEKSGGKFITMNGNHEIMN 141 (395)
Q Consensus 94 ~~lv~lGD~vDrG~~s-~evl~~l--~~l~~~a~~~~~~v~~l~GNHE~~~ 141 (395)
+.+|++||++|....+ .+....+ ..+. ..+.++++++||||...
T Consensus 43 d~lii~GDl~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 43 ERLIILGDLKHSFGGLSRQEFEEVAFLRLL----AKDVDVILIRGNHDGGL 89 (172)
T ss_pred CEEEEeCcccccccccCHHHHHHHHHHHhc----cCCCeEEEEcccCccch
Confidence 4799999999865432 2222221 1211 24558999999999754
No 62
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.63 E-value=0.00014 Score=67.04 Aligned_cols=76 Identities=25% Similarity=0.327 Sum_probs=48.1
Q ss_pred eEEEEecCC-CCH--------------HHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHH
Q 041373 59 RLIAIGDLH-GDL--------------EKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREA 123 (395)
Q Consensus 59 ~i~vigDiH-G~~--------------~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a 123 (395)
|++.++|+| |.. ..|.++++.+.-.. .+.+++.||++|....+.+.+..+.+.....
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~ 72 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEK--------VDFVLIAGDLFDSNNPSPEALELLIEALRRL 72 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcC--------CCEEEECCcccCCCCCCHHHHHHHHHHHHHH
Confidence 588999999 322 23566665543221 2469999999998776555444444333221
Q ss_pred hhcCCeEEEeCCCcchhhh
Q 041373 124 EKSGGKFITMNGNHEIMNI 142 (395)
Q Consensus 124 ~~~~~~v~~l~GNHE~~~l 142 (395)
...+..++++.||||....
T Consensus 73 ~~~~~~v~~~~GNHD~~~~ 91 (223)
T cd00840 73 KEAGIPVFIIAGNHDSPSR 91 (223)
T ss_pred HHCCCCEEEecCCCCCccc
Confidence 1125579999999997554
No 63
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.61 E-value=8.4e-05 Score=63.62 Aligned_cols=56 Identities=20% Similarity=0.214 Sum_probs=39.0
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcc
Q 041373 61 IAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHE 138 (395)
Q Consensus 61 ~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE 138 (395)
.||||+||..+.+.++.... . +.+.++++||+. .++++.+.++ .+..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~~--~--------~~d~ii~~GD~~------~~~~~~~~~~------~~~~~~~V~GN~D 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVRL--E--------GVDLILSAGDLP------KEYLEYLVTM------LNVPVYYVHGNHD 56 (129)
T ss_pred CeeccccCccccchHHHhhC--C--------CCCEEEECCCCC------hHHHHHHHHH------cCCCEEEEeCCCc
Confidence 37999999988777766531 1 124699999984 3445555554 1235899999999
No 64
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.61 E-value=0.00013 Score=65.16 Aligned_cols=42 Identities=31% Similarity=0.410 Sum_probs=31.0
Q ss_pred CcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcchhhh
Q 041373 93 TATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIMNI 142 (395)
Q Consensus 93 ~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE~~~l 142 (395)
.+.+|++||+++++..+.. ++.+.++ +..+++++||||....
T Consensus 43 ~d~vi~~GDl~~~~~~~~~-~~~l~~~-------~~~~~~v~GNHD~~~~ 84 (168)
T cd07390 43 DDTVYHLGDFSFGGKAGTE-LELLSRL-------NGRKHLIKGNHDSSLE 84 (168)
T ss_pred CCEEEEeCCCCCCCChHHH-HHHHHhC-------CCCeEEEeCCCCchhh
Confidence 4579999999999986644 4444433 3479999999997543
No 65
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.57 E-value=0.00031 Score=71.71 Aligned_cols=71 Identities=20% Similarity=0.370 Sum_probs=44.0
Q ss_pred CeEEEEecCC-CCH-------HH----HHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHH----HHHHHHHH
Q 041373 58 DRLIAIGDLH-GDL-------EK----SKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKIL----YLLEKLKR 121 (395)
Q Consensus 58 ~~i~vigDiH-G~~-------~~----l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl----~~l~~l~~ 121 (395)
||++.++|+| |.. .+ +..+++.+.-. ..+.+|+.||++|++..+.... +++..++.
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~--------~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~ 72 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEH--------QVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ 72 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhc--------CCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh
Confidence 6899999999 421 11 22333332111 1246999999999986554332 33344432
Q ss_pred HHhhcCCeEEEeCCCcchh
Q 041373 122 EAEKSGGKFITMNGNHEIM 140 (395)
Q Consensus 122 ~a~~~~~~v~~l~GNHE~~ 140 (395)
.+-.++++.||||..
T Consensus 73 ----~~~~v~~I~GNHD~~ 87 (407)
T PRK10966 73 ----TGCQLVVLAGNHDSV 87 (407)
T ss_pred ----cCCcEEEEcCCCCCh
Confidence 345799999999964
No 66
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.54 E-value=0.0003 Score=61.44 Aligned_cols=69 Identities=20% Similarity=0.351 Sum_probs=47.5
Q ss_pred CCeEEEEecCC------------CCHHHHHHHH-HH-hCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHH
Q 041373 57 VDRLIAIGDLH------------GDLEKSKQAL-RL-AGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKRE 122 (395)
Q Consensus 57 ~~~i~vigDiH------------G~~~~l~~ll-~~-~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~ 122 (395)
...+++|||+| -+++...+++ .. ... .++++.+++|||+.-.-....+..+++.+|
T Consensus 3 m~mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nnt-------v~p~D~lwhLGDl~~~~n~~~~a~~IlerL--- 72 (186)
T COG4186 3 MTMMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNT-------VGPDDVLWHLGDLSSGANRERAAGLILERL--- 72 (186)
T ss_pred eeEEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhc-------CCccceEEEecccccccchhhHHHHHHHHc---
Confidence 45789999999 3344443333 11 111 235568999999998666666666666666
Q ss_pred HhhcCCeEEEeCCCcch
Q 041373 123 AEKSGGKFITMNGNHEI 139 (395)
Q Consensus 123 a~~~~~~v~~l~GNHE~ 139 (395)
+|+.++++||||-
T Consensus 73 ----nGrkhlv~GNhDk 85 (186)
T COG4186 73 ----NGRKHLVPGNHDK 85 (186)
T ss_pred ----CCcEEEeeCCCCC
Confidence 6788999999994
No 67
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.53 E-value=0.00028 Score=71.81 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=56.6
Q ss_pred CCCCeEEEEecCCCC------------HHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHH
Q 041373 55 PRVDRLIAIGDLHGD------------LEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKRE 122 (395)
Q Consensus 55 ~~~~~i~vigDiHG~------------~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~ 122 (395)
++.+||+.++|+|-. +..|.++++.+.-.. .+.+++.||++|+..-|.+++..++++-+.
T Consensus 1 ~~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~--------vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~ 72 (405)
T TIGR00583 1 EDTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQD--------VDMILLGGDLFHENKPSRKSLYQVLRSLRL 72 (405)
T ss_pred CCceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcC--------CCEEEECCccCCCCCCCHHHHHHHHHHHHH
Confidence 357899999999932 457778887663222 246999999999999898887666555432
Q ss_pred H----------------h-----------------hcCCeEEEeCCCcchhh
Q 041373 123 A----------------E-----------------KSGGKFITMNGNHEIMN 141 (395)
Q Consensus 123 a----------------~-----------------~~~~~v~~l~GNHE~~~ 141 (395)
+ . ..+-.|+++-||||...
T Consensus 73 ~~~g~~p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 73 YCLGDKPCELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hhccCCccchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 0 0 02458999999999753
No 68
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.47 E-value=0.00018 Score=69.19 Aligned_cols=75 Identities=21% Similarity=0.239 Sum_probs=44.5
Q ss_pred EEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCCh-HHH----------HHHHHHHHHHHhhcCC
Q 041373 60 LIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDE-IKI----------LYLLEKLKREAEKSGG 128 (395)
Q Consensus 60 i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s-~ev----------l~~l~~l~~~a~~~~~ 128 (395)
|+|+||+||+++.+-+.++....... .+.+.+|++||+...+..+ .+. .++..-+.. ....|-
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~-----~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g-~~~~p~ 74 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEG-----TKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSG-EKKAPI 74 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcC-----CCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcC-CccCCe
Confidence 58999999999988776554321111 1235799999997554432 222 222111111 111455
Q ss_pred eEEEeCCCcchh
Q 041373 129 KFITMNGNHEIM 140 (395)
Q Consensus 129 ~v~~l~GNHE~~ 140 (395)
.+++|.||||..
T Consensus 75 ~t~fi~GNHE~~ 86 (262)
T cd00844 75 LTIFIGGNHEAS 86 (262)
T ss_pred eEEEECCCCCCH
Confidence 679999999964
No 69
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=97.46 E-value=0.00023 Score=61.34 Aligned_cols=42 Identities=29% Similarity=0.397 Sum_probs=28.8
Q ss_pred cEEEEeCcccCCCCCh--HHHHHHHHHHHHHHhhcCCeEEEeCCCcch
Q 041373 94 ATVVQIGDVLDRGDDE--IKILYLLEKLKREAEKSGGKFITMNGNHEI 139 (395)
Q Consensus 94 ~~lv~lGD~vDrG~~s--~evl~~l~~l~~~a~~~~~~v~~l~GNHE~ 139 (395)
+.++++||+++.+... .+..+++..+.. ....+++++||||.
T Consensus 37 d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~----~~~~~~~v~GNHD~ 80 (144)
T cd07400 37 DLVVITGDLTQRGLPEEFEEAREFLDALPA----PLEPVLVVPGNHDV 80 (144)
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHccc----cCCcEEEeCCCCeE
Confidence 5799999999988742 133444444432 11379999999996
No 70
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.40 E-value=0.00037 Score=65.58 Aligned_cols=41 Identities=22% Similarity=0.196 Sum_probs=27.1
Q ss_pred cEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcch
Q 041373 94 ATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEI 139 (395)
Q Consensus 94 ~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE~ 139 (395)
+.+|+.||++++++.. +....+..++. .+..+++++||||.
T Consensus 43 D~viiaGDl~~~~~~~-~~~~~l~~l~~----l~~~v~~V~GNHD~ 83 (232)
T cd07393 43 DIVLIPGDISWAMKLE-EAKLDLAWIDA----LPGTKVLLKGNHDY 83 (232)
T ss_pred CEEEEcCCCccCCChH-HHHHHHHHHHh----CCCCeEEEeCCccc
Confidence 4799999999877633 33333333321 23468999999996
No 71
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=97.39 E-value=0.00038 Score=70.52 Aligned_cols=75 Identities=21% Similarity=0.320 Sum_probs=52.8
Q ss_pred CeEEEEecCC-C------------CHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHh
Q 041373 58 DRLIAIGDLH-G------------DLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAE 124 (395)
Q Consensus 58 ~~i~vigDiH-G------------~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~ 124 (395)
||++-++|+| | .+.+|..+++.+.-..- +-+|+.||++|+..-|.+++..+.+.-+...
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~v--------D~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~ 72 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKV--------DFVLIAGDLFDTNNPSPRALKLFLEALRRLK 72 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccC--------CEEEEccccccCCCCCHHHHHHHHHHHHHhc
Confidence 6889999999 4 24455555555432211 3699999999999888877666665544433
Q ss_pred hcCCeEEEeCCCcchh
Q 041373 125 KSGGKFITMNGNHEIM 140 (395)
Q Consensus 125 ~~~~~v~~l~GNHE~~ 140 (395)
..+-.+++|.||||..
T Consensus 73 ~~~Ipv~~I~GNHD~~ 88 (390)
T COG0420 73 DAGIPVVVIAGNHDSP 88 (390)
T ss_pred cCCCcEEEecCCCCch
Confidence 3456899999999964
No 72
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.30 E-value=0.00049 Score=60.89 Aligned_cols=46 Identities=24% Similarity=0.367 Sum_probs=28.8
Q ss_pred cEEEEeCcccCCCCChH-HHH-HHHHHHHHHHhh-cCCeEEEeCCCcch
Q 041373 94 ATVVQIGDVLDRGDDEI-KIL-YLLEKLKREAEK-SGGKFITMNGNHEI 139 (395)
Q Consensus 94 ~~lv~lGD~vDrG~~s~-evl-~~l~~l~~~a~~-~~~~v~~l~GNHE~ 139 (395)
+.+|++||++|.+.... +.. +.+..+...... .+..+++++||||.
T Consensus 40 d~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~ 88 (156)
T cd08165 40 DVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDI 88 (156)
T ss_pred CEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCc
Confidence 47999999999876432 222 333333322111 13479999999996
No 73
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=97.28 E-value=0.0053 Score=62.11 Aligned_cols=41 Identities=29% Similarity=0.388 Sum_probs=34.6
Q ss_pred cEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcchhhh
Q 041373 94 ATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIMNI 142 (395)
Q Consensus 94 ~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE~~~l 142 (395)
++|=.+||+.||||.+-.+++.|.... .+-+--||||...+
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~yh--------svDiQWGNHDilWm 232 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINYH--------SVDIQWGNHDILWM 232 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhcc--------cccccccCcceEEe
Confidence 357899999999999999999999884 56777899997544
No 74
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.25 E-value=0.00055 Score=64.10 Aligned_cols=68 Identities=25% Similarity=0.368 Sum_probs=44.8
Q ss_pred EEEecCCCC------HHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCC--C-----CChHHHHHHHHHHHHHHhhcC
Q 041373 61 IAIGDLHGD------LEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDR--G-----DDEIKILYLLEKLKREAEKSG 127 (395)
Q Consensus 61 ~vigDiHG~------~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDr--G-----~~s~evl~~l~~l~~~a~~~~ 127 (395)
++|||+|=. .+.|...|+.. .. ..+.++++||++|- | +...+|...|..+.. .|
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~---a~------~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~----~G 67 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREE---AA------QADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLAR----KG 67 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhc---cc------cCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHh----cC
Confidence 479999932 23334444432 11 22479999999982 2 234577777777764 68
Q ss_pred CeEEEeCCCcchhh
Q 041373 128 GKFITMNGNHEIMN 141 (395)
Q Consensus 128 ~~v~~l~GNHE~~~ 141 (395)
.+++++.||||..+
T Consensus 68 ~~v~~i~GN~Dfll 81 (237)
T COG2908 68 TRVYYIHGNHDFLL 81 (237)
T ss_pred CeEEEecCchHHHH
Confidence 89999999999543
No 75
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.24 E-value=0.00057 Score=64.25 Aligned_cols=71 Identities=21% Similarity=0.239 Sum_probs=41.7
Q ss_pred CeEEEEecCC-CCHHHHH------------HHHHHh-CCCCCCCCCCCCCcEEEEeCcccCCCCC---hHHHHHHHHHHH
Q 041373 58 DRLIAIGDLH-GDLEKSK------------QALRLA-GLINGSDQWTGGTATVVQIGDVLDRGDD---EIKILYLLEKLK 120 (395)
Q Consensus 58 ~~i~vigDiH-G~~~~l~------------~ll~~~-~~~~~~~~w~~~~~~lv~lGD~vDrG~~---s~evl~~l~~l~ 120 (395)
.++.+|+|+| |.-..+. +.|+++ ..... ...+.+|++||+++.... ..++.+++..+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~-----~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~- 88 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADK-----YGIEALIINGDLKHEFKKGLEWRFIREFIEVT- 88 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhh-----cCCCEEEEcCccccccCChHHHHHHHHHHHhc-
Confidence 5689999999 5433221 233322 11111 123479999999976554 23333444433
Q ss_pred HHHhhcCCeEEEeCCCcchh
Q 041373 121 REAEKSGGKFITMNGNHEIM 140 (395)
Q Consensus 121 ~~a~~~~~~v~~l~GNHE~~ 140 (395)
...+++++||||..
T Consensus 89 ------~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 89 ------FRDLILIRGNHDAL 102 (225)
T ss_pred ------CCcEEEECCCCCCc
Confidence 23799999999964
No 76
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.23 E-value=0.0011 Score=63.40 Aligned_cols=75 Identities=23% Similarity=0.266 Sum_probs=48.0
Q ss_pred CeEEEEecCCCC------HHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEE
Q 041373 58 DRLIAIGDLHGD------LEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFI 131 (395)
Q Consensus 58 ~~i~vigDiHG~------~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~ 131 (395)
++++.|+|+|-. ...+.++++.+.... .+.+|+.||+.+.|. ..+. +.+.++-. ....+..++
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~--------~D~~v~tGDl~~~~~-~~~~-~~~~~~l~-~~~~~~~~~ 69 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLK--------PDLLVVTGDLTNDGE-PEEY-RRLKELLA-RLELPAPVI 69 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCC--------CCEEEEccCcCCCCC-HHHH-HHHHHHHh-hccCCCceE
Confidence 579999999966 344555666655222 247999999999963 2222 22222211 012466899
Q ss_pred EeCCCcchhhhh
Q 041373 132 TMNGNHEIMNIE 143 (395)
Q Consensus 132 ~l~GNHE~~~l~ 143 (395)
+++||||.....
T Consensus 70 ~vpGNHD~~~~~ 81 (301)
T COG1409 70 VVPGNHDARVVN 81 (301)
T ss_pred eeCCCCcCCchH
Confidence 999999987765
No 77
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.22 E-value=0.0014 Score=62.63 Aligned_cols=77 Identities=18% Similarity=0.168 Sum_probs=45.0
Q ss_pred CCeEEEEecCCCCH----------------HHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChH---HHHHHHH
Q 041373 57 VDRLIAIGDLHGDL----------------EKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEI---KILYLLE 117 (395)
Q Consensus 57 ~~~i~vigDiHG~~----------------~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~---evl~~l~ 117 (395)
.-++++|||+|-.. ..++++++.+.-.. ...+.+|++||+++.|.... +..+.+.
T Consensus 4 ~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~------~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~ 77 (262)
T cd07395 4 PFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLN------PKPKFVVVCGDLVNAMPGDELRERQVSDLK 77 (262)
T ss_pred CEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcC------CCCCEEEEeCCcCCCCcchhhHHHHHHHHH
Confidence 34789999999542 23455555543211 11246999999999887642 1122222
Q ss_pred HHHHHHhhcCCeEEEeCCCcchh
Q 041373 118 KLKREAEKSGGKFITMNGNHEIM 140 (395)
Q Consensus 118 ~l~~~a~~~~~~v~~l~GNHE~~ 140 (395)
+..... ..+-.++.++||||..
T Consensus 78 ~~~~~~-~~~vp~~~i~GNHD~~ 99 (262)
T cd07395 78 DVLSLL-DPDIPLVCVCGNHDVG 99 (262)
T ss_pred HHHhhc-cCCCcEEEeCCCCCCC
Confidence 221110 1245799999999974
No 78
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.01 E-value=0.0012 Score=62.54 Aligned_cols=72 Identities=21% Similarity=0.267 Sum_probs=40.6
Q ss_pred EEEecCC--CC---HHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCC-----C-------h----HHHHHHHHHH
Q 041373 61 IAIGDLH--GD---LEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGD-----D-------E----IKILYLLEKL 119 (395)
Q Consensus 61 ~vigDiH--G~---~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~-----~-------s----~evl~~l~~l 119 (395)
++|+|+| +. ...++.+++.+.-.... ....+.+|++||++|... . . ..+.+++.++
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~---~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L 78 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDS---ASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDV 78 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCccc---ccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhc
Confidence 6899999 33 13334444443221110 112357999999999731 0 0 1233344444
Q ss_pred HHHHhhcCCeEEEeCCCcchh
Q 041373 120 KREAEKSGGKFITMNGNHEIM 140 (395)
Q Consensus 120 ~~~a~~~~~~v~~l~GNHE~~ 140 (395)
. .+-.+++++||||..
T Consensus 79 ~-----~~~~v~~ipGNHD~~ 94 (243)
T cd07386 79 P-----SHIKIIIIPGNHDAV 94 (243)
T ss_pred c-----cCCeEEEeCCCCCcc
Confidence 2 235899999999964
No 79
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.92 E-value=0.0026 Score=61.84 Aligned_cols=73 Identities=21% Similarity=0.183 Sum_probs=51.5
Q ss_pred CCCeEEEEecCCCCHHH--HHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCC--CCChHHHHHHHHHHHHHHhhcCCeEE
Q 041373 56 RVDRLIAIGDLHGDLEK--SKQALRLAGLINGSDQWTGGTATVVQIGDVLDR--GDDEIKILYLLEKLKREAEKSGGKFI 131 (395)
Q Consensus 56 ~~~~i~vigDiHG~~~~--l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDr--G~~s~evl~~l~~l~~~a~~~~~~v~ 131 (395)
.+.+|+-++|+|-+... ..+.+..+.-.. .+.+++.||++|+ -+....++..+..|+ .+-.++
T Consensus 43 ~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~--------~DlivltGD~~~~~~~~~~~~~~~~L~~L~-----~~~gv~ 109 (284)
T COG1408 43 QGLKIVQLSDLHSLPFREEKLALLIAIANEL--------PDLIVLTGDYVDGDRPPGVAALALFLAKLK-----APLGVF 109 (284)
T ss_pred CCeEEEEeehhhhchhhHHHHHHHHHHHhcC--------CCEEEEEeeeecCCCCCCHHHHHHHHHhhh-----ccCCEE
Confidence 45579999999966543 333333321111 1579999999995 667778888888886 456899
Q ss_pred EeCCCcchhh
Q 041373 132 TMNGNHEIMN 141 (395)
Q Consensus 132 ~l~GNHE~~~ 141 (395)
++.||||...
T Consensus 110 av~GNHd~~~ 119 (284)
T COG1408 110 AVLGNHDYGV 119 (284)
T ss_pred EEeccccccc
Confidence 9999998643
No 80
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=96.92 E-value=0.0022 Score=61.32 Aligned_cols=74 Identities=22% Similarity=0.342 Sum_probs=40.6
Q ss_pred EEEEecCCCCHH---H---H-HHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCCh-------HHHH-HHHHHHHHHHh
Q 041373 60 LIAIGDLHGDLE---K---S-KQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDE-------IKIL-YLLEKLKREAE 124 (395)
Q Consensus 60 i~vigDiHG~~~---~---l-~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s-------~evl-~~l~~l~~~a~ 124 (395)
++.|+|+|-... . . ..+++.+.... .+.+|++||++|+.... .+-. .++..++....
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~--------pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIK--------PALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSV 73 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhC--------CCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCC
Confidence 578999994221 1 1 22344332222 23699999999986521 1111 33333322111
Q ss_pred hcCCeEEEeCCCcchhh
Q 041373 125 KSGGKFITMNGNHEIMN 141 (395)
Q Consensus 125 ~~~~~v~~l~GNHE~~~ 141 (395)
..+..++.++||||...
T Consensus 74 ~~~~p~~~v~GNHD~~~ 90 (256)
T cd07401 74 INKEKWFDIRGNHDLFN 90 (256)
T ss_pred CCcceEEEeCCCCCcCC
Confidence 12458899999999853
No 81
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.87 E-value=0.0021 Score=60.85 Aligned_cols=66 Identities=23% Similarity=0.370 Sum_probs=44.8
Q ss_pred eEEEEecCCCCH---------HHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChH-----HHHHHHHHHHHHHh
Q 041373 59 RLIAIGDLHGDL---------EKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEI-----KILYLLEKLKREAE 124 (395)
Q Consensus 59 ~i~vigDiHG~~---------~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~-----evl~~l~~l~~~a~ 124 (395)
+|+.++|+||.+ ..+..+++.+.-.. +++.++..||+++..+.+. .+++.+..+
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~-------~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----- 69 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAEN-------ENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----- 69 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcC-------CCeEEEeCCccCCCccchhccCCcHHHHHHHhc-----
Confidence 689999999876 56677776653221 2346789999999887654 455555444
Q ss_pred hcCCeEEEeCCCcch
Q 041373 125 KSGGKFITMNGNHEI 139 (395)
Q Consensus 125 ~~~~~v~~l~GNHE~ 139 (395)
+.. +++.||||.
T Consensus 70 --g~d-~~~~GNHe~ 81 (252)
T cd00845 70 --GYD-AVTIGNHEF 81 (252)
T ss_pred --CCC-EEeeccccc
Confidence 233 455699995
No 82
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=96.77 E-value=0.0019 Score=60.07 Aligned_cols=73 Identities=22% Similarity=0.340 Sum_probs=42.2
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHH-----------------------
Q 041373 57 VDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKIL----------------------- 113 (395)
Q Consensus 57 ~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl----------------------- 113 (395)
.++|.+|+|.||+++.+.++.+.+.-. +.+.++|+||++-....+.+-.
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~--------~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e 76 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEK--------GPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSE 76 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHH--------T-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhcccc--------CCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHH
Confidence 358999999999999999998765322 2246999999987554333322
Q ss_pred ---HHHHHHHHHHhhcCCeEEEeCCCcchhh
Q 041373 114 ---YLLEKLKREAEKSGGKFITMNGNHEIMN 141 (395)
Q Consensus 114 ---~~l~~l~~~a~~~~~~v~~l~GNHE~~~ 141 (395)
.++..|. ..+-.+++|+||||.-.
T Consensus 77 ~~~~ff~~L~----~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 77 ALDKFFRILG----ELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HHHHHHHHHH----CC-SEEEEE--TTS-SH
T ss_pred HHHHHHHHHH----hcCCcEEEecCCCCchH
Confidence 3333332 25668999999999743
No 83
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.72 E-value=0.0024 Score=58.59 Aligned_cols=47 Identities=23% Similarity=0.413 Sum_probs=33.4
Q ss_pred cEEEEeCcccCCCCChH--HHHHHHHHHHHHHh-hcCCeEEEeCCCcchh
Q 041373 94 ATVVQIGDVLDRGDDEI--KILYLLEKLKREAE-KSGGKFITMNGNHEIM 140 (395)
Q Consensus 94 ~~lv~lGD~vDrG~~s~--evl~~l~~l~~~a~-~~~~~v~~l~GNHE~~ 140 (395)
+.+||+||++|.|+.+. +..+.+.+++.-.. .....+++|+||||.-
T Consensus 44 D~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 44 DIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 46999999999999643 46777766653211 1234789999999963
No 84
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=96.50 E-value=0.0035 Score=60.59 Aligned_cols=70 Identities=16% Similarity=0.218 Sum_probs=40.7
Q ss_pred CCeEEEEecCCC----CHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCCh-----HHHHHHHHHHHHHHhhcC
Q 041373 57 VDRLIAIGDLHG----DLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDE-----IKILYLLEKLKREAEKSG 127 (395)
Q Consensus 57 ~~~i~vigDiHG----~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s-----~evl~~l~~l~~~a~~~~ 127 (395)
.-+++|+||.|. ....+.++.+. .. ..+.++++||+++.+... -..++.+..+. ..
T Consensus 4 ~~~f~v~gD~~~~~~~~~~~~~~l~~~---~~-------~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~-----~~ 68 (294)
T cd00839 4 PFKFAVFGDMGQNTNNSTNTLDHLEKE---LG-------NYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLA-----SY 68 (294)
T ss_pred cEEEEEEEECCCCCCCcHHHHHHHHhc---cC-------CccEEEEcCchhhhcCCccchhHHHHHHHHHHHH-----hc
Confidence 458999999995 23333333332 11 124699999999644332 12222222221 23
Q ss_pred CeEEEeCCCcchhh
Q 041373 128 GKFITMNGNHEIMN 141 (395)
Q Consensus 128 ~~v~~l~GNHE~~~ 141 (395)
-.++.++||||...
T Consensus 69 ~P~~~~~GNHD~~~ 82 (294)
T cd00839 69 VPYMVTPGNHEADY 82 (294)
T ss_pred CCcEEcCccccccc
Confidence 47899999999743
No 85
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.38 E-value=0.0071 Score=53.24 Aligned_cols=68 Identities=18% Similarity=0.256 Sum_probs=48.2
Q ss_pred EEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcc
Q 041373 61 IAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHE 138 (395)
Q Consensus 61 ~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE 138 (395)
.|+||+||+++.+-+-++.+.-. .++=+.++++||+..-..++-+.-.++..-+ +.|-..+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k------~gpFd~~ic~Gdff~~~~~~~~~~~y~~g~~----~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKK------KGPFDALLCVGDFFGDDEDDEELEAYKDGSK----KVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcc------cCCeeEEEEecCccCCccchhhHHHHhcCCc----cCCCCEEEECCCCC
Confidence 48999999999987777664211 1234689999999987666644444443322 35778899999998
No 86
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.37 E-value=0.01 Score=53.23 Aligned_cols=47 Identities=23% Similarity=0.244 Sum_probs=28.9
Q ss_pred cEEEEeCcccCCCCChH--HHHHHHHHHHHHHhh-c----CCeEEEeCCCcchh
Q 041373 94 ATVVQIGDVLDRGDDEI--KILYLLEKLKREAEK-S----GGKFITMNGNHEIM 140 (395)
Q Consensus 94 ~~lv~lGD~vDrG~~s~--evl~~l~~l~~~a~~-~----~~~v~~l~GNHE~~ 140 (395)
+.+|++||++|.+.... +..+.+..+...... . +..+++++||||..
T Consensus 47 d~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 47 DVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred CEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 47999999999887432 222233322221110 1 45799999999974
No 87
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=95.81 E-value=0.016 Score=54.57 Aligned_cols=71 Identities=24% Similarity=0.382 Sum_probs=41.3
Q ss_pred CCCeEEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCC-----hHHHHH
Q 041373 56 RVDRLIAIGDLHGDLE----------------KSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDD-----EIKILY 114 (395)
Q Consensus 56 ~~~~i~vigDiHG~~~----------------~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~-----s~evl~ 114 (395)
...++.||+|+|=.++ .+.+.|.. +... .+.+++|++||+-.-.+. ..++..
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~--ii~~-----~~p~~lIilGD~KH~~~~~~~~e~~~~~~ 90 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDR--IIER-----YGPKRLIILGDLKHEFGKSLRQEKEEVRE 90 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHH--HHHh-----cCCCEEEEcCccccccCccccccHHHHHH
Confidence 3457899999994433 22333321 1111 123479999999975443 233444
Q ss_pred HHHHHHHHHhhcCCeEEEeCCCcch
Q 041373 115 LLEKLKREAEKSGGKFITMNGNHEI 139 (395)
Q Consensus 115 ~l~~l~~~a~~~~~~v~~l~GNHE~ 139 (395)
++..+.. ..+++++||||-
T Consensus 91 f~~~~~~------~evi~i~GNHD~ 109 (235)
T COG1407 91 FLELLDE------REVIIIRGNHDN 109 (235)
T ss_pred HHHHhcc------CcEEEEeccCCC
Confidence 4433321 159999999995
No 88
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=95.76 E-value=0.015 Score=56.07 Aligned_cols=35 Identities=17% Similarity=0.287 Sum_probs=22.6
Q ss_pred HHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecCC
Q 041373 298 ALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGL 334 (395)
Q Consensus 298 ~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~ 334 (395)
+.+.+++.+.||.||+++.. .....+.++.+=+|+
T Consensus 212 la~~~~~vD~IlgGHsH~~~--~~~~~~~~~v~q~g~ 246 (277)
T cd07410 212 LAEEVPGIDAILTGHQHRRF--PGPTVNGVPVVQPGN 246 (277)
T ss_pred HHhcCCCCcEEEeCCCcccc--ccCCcCCEEEEcCCh
Confidence 33445789999999999863 221234456666665
No 89
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=95.22 E-value=0.034 Score=53.28 Aligned_cols=46 Identities=24% Similarity=0.341 Sum_probs=26.7
Q ss_pred cEEEEeCcccCCCCChH--HHHHHHHHHHHHHhhc--CCeEEEeCCCcch
Q 041373 94 ATVVQIGDVLDRGDDEI--KILYLLEKLKREAEKS--GGKFITMNGNHEI 139 (395)
Q Consensus 94 ~~lv~lGD~vDrG~~s~--evl~~l~~l~~~a~~~--~~~v~~l~GNHE~ 139 (395)
+.+||+||++|.|.... +-.+...+.+...... ...++.|+||||.
T Consensus 47 D~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDi 96 (257)
T cd08163 47 DSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDI 96 (257)
T ss_pred CEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCccc
Confidence 36999999999987532 1111122221111011 1368999999996
No 90
>PLN02533 probable purple acid phosphatase
Probab=95.11 E-value=0.042 Score=56.58 Aligned_cols=74 Identities=19% Similarity=0.195 Sum_probs=40.3
Q ss_pred CCCeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCC
Q 041373 56 RVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNG 135 (395)
Q Consensus 56 ~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~G 135 (395)
..-+++++||+|-. .....+++.+.... .+.++++||+++-+... ...+..+++.... ...-.+..++|
T Consensus 138 ~~~~f~v~GDlG~~-~~~~~tl~~i~~~~--------pD~vl~~GDl~y~~~~~-~~wd~f~~~i~~l-~s~~P~m~~~G 206 (427)
T PLN02533 138 FPIKFAVSGDLGTS-EWTKSTLEHVSKWD--------YDVFILPGDLSYANFYQ-PLWDTFGRLVQPL-ASQRPWMVTHG 206 (427)
T ss_pred CCeEEEEEEeCCCC-cccHHHHHHHHhcC--------CCEEEEcCccccccchH-HHHHHHHHHhhhH-hhcCceEEeCc
Confidence 35689999999632 12223444332111 23699999999854332 2222222221100 11236889999
Q ss_pred Ccchh
Q 041373 136 NHEIM 140 (395)
Q Consensus 136 NHE~~ 140 (395)
|||..
T Consensus 207 NHE~~ 211 (427)
T PLN02533 207 NHELE 211 (427)
T ss_pred ccccc
Confidence 99974
No 91
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=94.94 E-value=0.053 Score=51.72 Aligned_cols=65 Identities=20% Similarity=0.308 Sum_probs=42.0
Q ss_pred eEEEEecCCCC----------HHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChH-----HHHHHHHHHHHHH
Q 041373 59 RLIAIGDLHGD----------LEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEI-----KILYLLEKLKREA 123 (395)
Q Consensus 59 ~i~vigDiHG~----------~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~-----evl~~l~~l~~~a 123 (395)
+|+-++|+||+ +..+..+++...-. +++.++..||+++..+.+. .+++.+..+
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~--------~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~---- 69 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL--------DNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV---- 69 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhc--------CCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----
Confidence 68899999997 44566666654321 2357999999999766432 333333333
Q ss_pred hhcCCeEEEeCCCcch
Q 041373 124 EKSGGKFITMNGNHEI 139 (395)
Q Consensus 124 ~~~~~~v~~l~GNHE~ 139 (395)
+..+ ...||||.
T Consensus 70 ---g~d~-~~~GNHef 81 (257)
T cd07408 70 ---GYDA-VTPGNHEF 81 (257)
T ss_pred ---CCcE-Eccccccc
Confidence 3355 55799995
No 92
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=94.83 E-value=0.084 Score=48.40 Aligned_cols=68 Identities=18% Similarity=0.218 Sum_probs=38.3
Q ss_pred cCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChH-HHHHHHHHHHHHHhhc-----------------
Q 041373 65 DLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEI-KILYLLEKLKREAEKS----------------- 126 (395)
Q Consensus 65 DiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~-evl~~l~~l~~~a~~~----------------- 126 (395)
|++|+=.=|.+..+.+. |....+.++||||++|.|--+- |--+.+.+........
T Consensus 24 d~~~~D~YL~~~~~~~~-------~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~ 96 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQ-------FWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFED 96 (193)
T ss_pred hhhhhHHHHHHHHHHHH-------HhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCccccccccccccccccc
Confidence 44666555666665442 2222347999999999864322 2223333333321001
Q ss_pred -CCeEEEeCCCcch
Q 041373 127 -GGKFITMNGNHEI 139 (395)
Q Consensus 127 -~~~v~~l~GNHE~ 139 (395)
+-.++.|+||||.
T Consensus 97 ~~i~~i~V~GNHDI 110 (193)
T cd08164 97 GKTPLINIAGNHDV 110 (193)
T ss_pred CCceEEEECCcccC
Confidence 2467899999996
No 93
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=94.64 E-value=0.064 Score=51.40 Aligned_cols=46 Identities=15% Similarity=0.397 Sum_probs=27.9
Q ss_pred hcCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCCcceEEEEe
Q 041373 300 ATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEIN 349 (395)
Q Consensus 300 ~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~lt~L~I~ 349 (395)
+..++.+.|+.||++....-+....++++.+-+|+. +..+..+.|.
T Consensus 203 ~~~~~iDlilgGH~H~~~~~~~~~~~~t~v~~~g~~----~~~vg~i~l~ 248 (264)
T cd07411 203 ERVPGIDVILSGHTHERTPKPIIAGGGTLVVEAGSH----GKFLGRLDLD 248 (264)
T ss_pred hcCCCCcEEEeCcccccccCcccccCCEEEEEcCcc----ccEEEEEEEE
Confidence 345789999999999752111122345677777763 3455555555
No 94
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=94.53 E-value=0.092 Score=51.09 Aligned_cols=66 Identities=24% Similarity=0.300 Sum_probs=43.3
Q ss_pred eEEEEecCCCCH--------------HHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCC-h-----HHHHHHHHH
Q 041373 59 RLIAIGDLHGDL--------------EKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDD-E-----IKILYLLEK 118 (395)
Q Consensus 59 ~i~vigDiHG~~--------------~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~-s-----~evl~~l~~ 118 (395)
+|+.++|+||++ ..+..+++..... .+++.++..||++...+. + ..+++.+..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~-------~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~ 74 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQ-------NPNSLFVSAGDLIGASPFESALLQDEPTIEALNA 74 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhc-------CCCeEEEeCCcccccccchhhcccCCcHHHHHHh
Confidence 688999999874 3466666654321 234579999999987664 2 245555555
Q ss_pred HHHHHhhcCCeEEEeCCCcch
Q 041373 119 LKREAEKSGGKFITMNGNHEI 139 (395)
Q Consensus 119 l~~~a~~~~~~v~~l~GNHE~ 139 (395)
+. .. .+..||||.
T Consensus 75 ~g-------~D-a~t~GNHef 87 (288)
T cd07412 75 MG-------VD-ASAVGNHEF 87 (288)
T ss_pred hC-------Ce-eeeeccccc
Confidence 52 24 466699994
No 95
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=94.38 E-value=0.076 Score=47.84 Aligned_cols=43 Identities=23% Similarity=0.280 Sum_probs=31.2
Q ss_pred CCcEEEEeCccc--CCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcchhh
Q 041373 92 GTATVVQIGDVL--DRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIMN 141 (395)
Q Consensus 92 ~~~~lv~lGD~v--DrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE~~~ 141 (395)
+.+.+.+-||+- -|=++..+=+.++-.| |+.=+++|||||.+.
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L-------PG~K~m~rGNHDYWw 87 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAEEDLRFIGDL-------PGTKYMIRGNHDYWW 87 (230)
T ss_pred hhhEEEecccchhheechhhhhhhhhhhcC-------CCcEEEEecCCcccc
Confidence 345788899986 3455566667777666 677799999999643
No 96
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=93.87 E-value=0.096 Score=53.10 Aligned_cols=79 Identities=23% Similarity=0.426 Sum_probs=49.3
Q ss_pred CCCCeEEEEecCC--CCH---------HH------HHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCCh--HHHHHH
Q 041373 55 PRVDRLIAIGDLH--GDL---------EK------SKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDE--IKILYL 115 (395)
Q Consensus 55 ~~~~~i~vigDiH--G~~---------~~------l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s--~evl~~ 115 (395)
....|+..|+|-| |+. +. |.+.+..+ +|....+.++||||++|-|+.+ -|--+.
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~-------~~~lkPdvvffLGDLfDeG~~~~~eEf~~~ 118 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMS-------QWRLKPDVVFFLGDLFDEGQWAGDEEFKKR 118 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHH-------HhccCCCEEEEeccccccCccCChHHHHHH
Confidence 4556999999977 521 11 22222221 3555667899999999988744 344555
Q ss_pred HHHHHHHHhh-cCCeEEEeCCCcchh
Q 041373 116 LEKLKREAEK-SGGKFITMNGNHEIM 140 (395)
Q Consensus 116 l~~l~~~a~~-~~~~v~~l~GNHE~~ 140 (395)
..++++-... ...+++.++||||.-
T Consensus 119 ~~RfkkIf~~k~~~~~~~i~GNhDIG 144 (410)
T KOG3662|consen 119 YERFKKIFGRKGNIKVIYIAGNHDIG 144 (410)
T ss_pred HHHHHHhhCCCCCCeeEEeCCccccc
Confidence 5555443221 133789999999963
No 97
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=93.86 E-value=0.16 Score=48.94 Aligned_cols=67 Identities=28% Similarity=0.379 Sum_probs=48.9
Q ss_pred CeEEEEecCCCC--HHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCC-CChHHHHHHHHHHHHHHhhcCCeEEEeC
Q 041373 58 DRLIAIGDLHGD--LEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRG-DDEIKILYLLEKLKREAEKSGGKFITMN 134 (395)
Q Consensus 58 ~~i~vigDiHG~--~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG-~~s~evl~~l~~l~~~a~~~~~~v~~l~ 134 (395)
|||.+||||=|. ...+...|..+...... +.+|.+||....| .-+.++++.|.+. |-+++.+
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~-------D~vIaNgEn~~gG~Gi~~~~~~~L~~~-------GvDviT~- 65 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQA-------DLVIANGENTTHGKGLTLKIYEFLKQS-------GVNYITM- 65 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCC-------CEEEEcCcccCCCCCCCHHHHHHHHhc-------CCCEEEc-
Confidence 689999999999 56777777665433222 3688899999766 4567888777765 4466666
Q ss_pred CCcch
Q 041373 135 GNHEI 139 (395)
Q Consensus 135 GNHE~ 139 (395)
|||+.
T Consensus 66 GNH~~ 70 (266)
T TIGR00282 66 GNHTW 70 (266)
T ss_pred cchhc
Confidence 99995
No 98
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=93.77 E-value=0.14 Score=49.02 Aligned_cols=23 Identities=22% Similarity=0.212 Sum_probs=17.2
Q ss_pred HHHHHHhcCCCCcEEEEcccCCCC
Q 041373 294 ALEHALATIPGVKRMIMGHTIQEK 317 (395)
Q Consensus 294 ~l~~~L~~~~g~~~vV~GHT~~~~ 317 (395)
.+.+.+... +...+++||++...
T Consensus 192 ~l~~l~~~~-~v~~vl~GH~H~~~ 214 (277)
T cd07378 192 RLLPLLKKY-KVDAYLSGHDHNLQ 214 (277)
T ss_pred HHHHHHHHc-CCCEEEeCCcccce
Confidence 455566654 68999999999864
No 99
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.66 E-value=0.47 Score=41.48 Aligned_cols=62 Identities=13% Similarity=0.191 Sum_probs=41.5
Q ss_pred eEEEEecCCC--CHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCC
Q 041373 59 RLIAIGDLHG--DLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGN 136 (395)
Q Consensus 59 ~i~vigDiHG--~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GN 136 (395)
-+.|+||+|= ...+|..-++++=.+.. -.+++++|.+. |.|+.++|..+.. +++++||-
T Consensus 2 LvL~lgD~HiP~Ra~~Lp~KFkklLvPgk-------i~hilctGNlc-----s~e~~dylk~l~~-------dvhiVrGe 62 (183)
T KOG3325|consen 2 LVLVLGDLHIPHRANDLPAKFKKLLVPGK-------IQHILCTGNLC-----SKESYDYLKTLSS-------DVHIVRGE 62 (183)
T ss_pred EEEEeccccCCccccccCHHHHhccCCCc-------eeEEEEeCCcc-----hHHHHHHHHhhCC-------CcEEEecc
Confidence 4789999992 22333333332212222 24799999865 7899999999853 79999998
Q ss_pred cch
Q 041373 137 HEI 139 (395)
Q Consensus 137 HE~ 139 (395)
-|.
T Consensus 63 FD~ 65 (183)
T KOG3325|consen 63 FDE 65 (183)
T ss_pred cCc
Confidence 774
No 100
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=93.04 E-value=0.21 Score=47.75 Aligned_cols=66 Identities=20% Similarity=0.205 Sum_probs=44.2
Q ss_pred eEEEEecCC----------CCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCCh-----HHHHHHHHHHHHHH
Q 041373 59 RLIAIGDLH----------GDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDE-----IKILYLLEKLKREA 123 (395)
Q Consensus 59 ~i~vigDiH----------G~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s-----~evl~~l~~l~~~a 123 (395)
+|+-+.|+| |.+..+..++++..-. .++..++..||+++..+.+ ..+++.+..+.
T Consensus 2 ~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~-------~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~--- 71 (257)
T cd07406 2 TILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKE-------NPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG--- 71 (257)
T ss_pred eEEEEccceeecccCCCCcCCHHHHHHHHHHHHhc-------CCCEEEEECCCccCCccchhhcCCccHHHHHHhcC---
Confidence 466677777 4577888888765422 1345799999999977532 45666655552
Q ss_pred hhcCCeEEEeCCCcch
Q 041373 124 EKSGGKFITMNGNHEI 139 (395)
Q Consensus 124 ~~~~~~v~~l~GNHE~ 139 (395)
--..+.||||.
T Consensus 72 -----~d~~~~GNHef 82 (257)
T cd07406 72 -----VDLACFGNHEF 82 (257)
T ss_pred -----CcEEeeccccc
Confidence 23567899995
No 101
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=92.77 E-value=0.39 Score=47.44 Aligned_cols=48 Identities=21% Similarity=0.093 Sum_probs=32.8
Q ss_pred CcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcchhh
Q 041373 93 TATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIMN 141 (395)
Q Consensus 93 ~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE~~~ 141 (395)
.+.+||+||.|+. .........+++-..-+.+++-...++.||||+..
T Consensus 101 PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 101 PDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred CCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEeccccccc
Confidence 3579999999995 54444444444433333447778899999999754
No 102
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=92.36 E-value=0.31 Score=47.19 Aligned_cols=66 Identities=15% Similarity=0.131 Sum_probs=40.4
Q ss_pred eEEEEecCCCC---------------------HHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCCh-----HHH
Q 041373 59 RLIAIGDLHGD---------------------LEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDE-----IKI 112 (395)
Q Consensus 59 ~i~vigDiHG~---------------------~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s-----~ev 112 (395)
+|+.++|+||+ +..+..+++.+.-. .++..++..||+++..+.+ ..+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~-------~~~~l~ld~GD~~~gs~~~~~~~g~~~ 74 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAE-------NPNVLFLNAGDAFQGTLWYTLYKGNAD 74 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhc-------CCCEEEEeCCCCCCCcchhhhcCChHH
Confidence 57788888876 45566666654321 1235677799999976633 334
Q ss_pred HHHHHHHHHHHhhcCCeEEEeCCCcch
Q 041373 113 LYLLEKLKREAEKSGGKFITMNGNHEI 139 (395)
Q Consensus 113 l~~l~~l~~~a~~~~~~v~~l~GNHE~ 139 (395)
++.+..+ +-.+ +..||||.
T Consensus 75 ~~~ln~~-------g~D~-~~lGNHef 93 (281)
T cd07409 75 AEFMNLL-------GYDA-MTLGNHEF 93 (281)
T ss_pred HHHHHhc-------CCCE-EEeccccc
Confidence 4444443 3344 45599995
No 103
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=92.08 E-value=0.42 Score=49.28 Aligned_cols=81 Identities=17% Similarity=0.170 Sum_probs=44.4
Q ss_pred CCCCCeEEEEecCCC-CH----HHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCC-----C-------ChHHHHHHH
Q 041373 54 LPRVDRLIAIGDLHG-DL----EKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRG-----D-------DEIKILYLL 116 (395)
Q Consensus 54 ~~~~~~i~vigDiHG-~~----~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG-----~-------~s~evl~~l 116 (395)
.+..-+++.|+|||= .. +++...++.++-... -...-..+++.||.||.. . +..+-.+.+
T Consensus 222 ~~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~---~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~ 298 (481)
T COG1311 222 GDERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGD---LASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEEL 298 (481)
T ss_pred CCcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcc---cccceEEEEEecccccccccccCcccccccccchHHHHHH
Confidence 344457899999994 33 334444443332211 011124788999999942 1 222233333
Q ss_pred HHHHHHHhhcCC--eEEEeCCCcchh
Q 041373 117 EKLKREAEKSGG--KFITMNGNHEIM 140 (395)
Q Consensus 117 ~~l~~~a~~~~~--~v~~l~GNHE~~ 140 (395)
.++-.+ -|. .+++.+||||..
T Consensus 299 A~~L~~---vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 299 AEFLDQ---VPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HHHHhh---CCCCceEEEecCCCCcc
Confidence 333222 222 789999999963
No 104
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=91.22 E-value=0.37 Score=55.85 Aligned_cols=67 Identities=21% Similarity=0.276 Sum_probs=42.6
Q ss_pred CeEEEEecCCCC---HHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChH-----HHHHHHHHHHHHHhhcCCe
Q 041373 58 DRLIAIGDLHGD---LEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEI-----KILYLLEKLKREAEKSGGK 129 (395)
Q Consensus 58 ~~i~vigDiHG~---~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~-----evl~~l~~l~~~a~~~~~~ 129 (395)
-+|+.++|+||. +..+..+++...-.. ++..++..||++++.+.+. .+++.+..+. -
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~-------~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg--------~ 725 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEEN-------PNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG--------Y 725 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhC-------CCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC--------C
Confidence 589999999987 455566665543111 1234455899999876442 4555555541 2
Q ss_pred EEEeCCCcch
Q 041373 130 FITMNGNHEI 139 (395)
Q Consensus 130 v~~l~GNHE~ 139 (395)
-..+.||||.
T Consensus 726 d~~~~GNHEf 735 (1163)
T PRK09419 726 DASTFGNHEF 735 (1163)
T ss_pred CEEEeccccc
Confidence 2569999995
No 105
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=89.70 E-value=0.94 Score=43.42 Aligned_cols=66 Identities=29% Similarity=0.294 Sum_probs=45.4
Q ss_pred eEEEEecCCCCH--HHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCC-CChHHHHHHHHHHHHHHhhcCCeEEEeCC
Q 041373 59 RLIAIGDLHGDL--EKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRG-DDEIKILYLLEKLKREAEKSGGKFITMNG 135 (395)
Q Consensus 59 ~i~vigDiHG~~--~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG-~~s~evl~~l~~l~~~a~~~~~~v~~l~G 135 (395)
||.+||||=|.. ..+.+.|..+.-... .+.+|.+||..-.| .-+.++.+.|..+ +-.+..+ |
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~-------~D~vi~NgEn~~gg~gl~~~~~~~L~~~-------G~D~iTl-G 65 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYK-------IDFVIANGENAAGGKGITPKIAKELLSA-------GVDVITM-G 65 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCC-------CCEEEECCccccCCCCCCHHHHHHHHhc-------CCCEEEe-c
Confidence 589999999985 455666665432211 23688899999766 4677888777776 3355555 9
Q ss_pred Ccch
Q 041373 136 NHEI 139 (395)
Q Consensus 136 NHE~ 139 (395)
||+.
T Consensus 66 NH~f 69 (255)
T cd07382 66 NHTW 69 (255)
T ss_pred cccc
Confidence 9984
No 106
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=88.59 E-value=1.7 Score=41.88 Aligned_cols=95 Identities=20% Similarity=0.241 Sum_probs=57.5
Q ss_pred HHHHHHhhhcCCccCCCCCCCCCCCCCCCCCCCCCCCeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCc
Q 041373 22 VDTFVDFTVSGGLFLPNPDPKTSQNVREPTTRLPRVDRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGD 101 (395)
Q Consensus 22 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD 101 (395)
..++..+.++++.+=|... + - +.....-+...|.++|+|.|........ . +.. +.++.+||
T Consensus 31 t~a~~~~~~~q~~~kp~vk-p---i-~~~ap~~~~~~r~VcisdtH~~~~~i~~------~-p~g-------Dvlihagd 91 (305)
T KOG3947|consen 31 TQAFTFYNKNQRRFKPPVK-P---I-RLDAPVGPGYARFVCISDTHELTFDIND------I-PDG-------DVLIHAGD 91 (305)
T ss_pred HHHHHHHHHhcCcccCCCC-C---c-CCCCCCCCCceEEEEecCcccccCcccc------C-CCC-------ceEEeccC
Confidence 3456667777755544321 1 1 1122344667799999999998765532 1 222 35899999
Q ss_pred ccCCCCChHHHHHHHHHHHHHHhhcCC-eEEEeCCCcchh
Q 041373 102 VLDRGDDEIKILYLLEKLKREAEKSGG-KFITMNGNHEIM 140 (395)
Q Consensus 102 ~vDrG~~s~evl~~l~~l~~~a~~~~~-~v~~l~GNHE~~ 140 (395)
+-.-|. +.||+.+=..+-. .|- .=++|.||||+-
T Consensus 92 fT~~g~-~~ev~~fn~~~gs----lph~yKIVIaGNHELt 126 (305)
T KOG3947|consen 92 FTNLGL-PEEVIKFNEWLGS----LPHEYKIVIAGNHELT 126 (305)
T ss_pred CccccC-HHHHHhhhHHhcc----CcceeeEEEeecccee
Confidence 988554 5666655444322 121 337899999974
No 107
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=88.58 E-value=0.76 Score=44.51 Aligned_cols=74 Identities=20% Similarity=0.185 Sum_probs=42.6
Q ss_pred EEEecCCCC--HHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHH-------HHHHHHH-HHHHHhhcCCeE
Q 041373 61 IAIGDLHGD--LEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIK-------ILYLLEK-LKREAEKSGGKF 130 (395)
Q Consensus 61 ~vigDiHG~--~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~e-------vl~~l~~-l~~~a~~~~~~v 130 (395)
--.|+-..+ ...+..+++.+.-.. ...+.+|+.||+++.+..... .+..+.. ++.. .....+
T Consensus 41 ~~~G~~~CD~p~~l~~s~l~~i~~~~------~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~pv 112 (296)
T cd00842 41 GPWGDYGCDSPWRLVESALEAIKKNH------PKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKA--FPDTPV 112 (296)
T ss_pred CCCcCcCCCCcHHHHHHHHHHHHHhC------CCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHh--CCCCCE
Confidence 346776533 356677776553321 123469999999998765321 1222222 2222 123489
Q ss_pred EEeCCCcchhhh
Q 041373 131 ITMNGNHEIMNI 142 (395)
Q Consensus 131 ~~l~GNHE~~~l 142 (395)
+.+.||||....
T Consensus 113 ~~~~GNHD~~p~ 124 (296)
T cd00842 113 YPALGNHDSYPV 124 (296)
T ss_pred EEcCCCCCCCcc
Confidence 999999997543
No 108
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=88.29 E-value=0.64 Score=45.17 Aligned_cols=70 Identities=19% Similarity=0.165 Sum_probs=39.9
Q ss_pred eEEEEecCCCCHH-------------HHHHHHHHhCC-CCCCCCCCCCCcEEEEeCcccCCCCCh-------HHHHHHHH
Q 041373 59 RLIAIGDLHGDLE-------------KSKQALRLAGL-INGSDQWTGGTATVVQIGDVLDRGDDE-------IKILYLLE 117 (395)
Q Consensus 59 ~i~vigDiHG~~~-------------~l~~ll~~~~~-~~~~~~w~~~~~~lv~lGD~vDrG~~s-------~evl~~l~ 117 (395)
+|+-+.|+||.+. .+.++++.+.- ..+ ..++..++..||++..-+.+ .-+++++-
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~----~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN 82 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQ----KGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFR 82 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHh----cCCCEEEEeCCCccCCeeceeeecCCChHHHHHHH
Confidence 7899999998753 12222222110 000 01234677899999965433 22455555
Q ss_pred HHHHHHhhcCCeEEEeCCCcchh
Q 041373 118 KLKREAEKSGGKFITMNGNHEIM 140 (395)
Q Consensus 118 ~l~~~a~~~~~~v~~l~GNHE~~ 140 (395)
.+. -=.+..||||.-
T Consensus 83 ~mg--------yDa~tlGNHEFd 97 (282)
T cd07407 83 MMP--------YDLLTIGNHELY 97 (282)
T ss_pred hcC--------CcEEeecccccC
Confidence 542 236889999973
No 109
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=87.24 E-value=0.83 Score=45.06 Aligned_cols=70 Identities=17% Similarity=0.111 Sum_probs=42.6
Q ss_pred eEEEEecCCCCH------HHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCC-------------hHHHHHHHHHH
Q 041373 59 RLIAIGDLHGDL------EKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDD-------------EIKILYLLEKL 119 (395)
Q Consensus 59 ~i~vigDiHG~~------~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~-------------s~evl~~l~~l 119 (395)
+|+-+.|+||++ ..+..+++...-..+. ..+++.++..||.+..++. ...+++++-.+
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~---~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~ 78 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAA---EYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNAL 78 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhc---cCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhcc
Confidence 578899999985 3454455443211000 0234689999999986553 23445555555
Q ss_pred HHHHhhcCCeEEEeCCCcch
Q 041373 120 KREAEKSGGKFITMNGNHEI 139 (395)
Q Consensus 120 ~~~a~~~~~~v~~l~GNHE~ 139 (395)
. -=....||||.
T Consensus 79 g--------~Da~tlGNHEF 90 (313)
T cd08162 79 G--------VQAIALGNHEF 90 (313)
T ss_pred C--------CcEEecccccc
Confidence 2 22577999994
No 110
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=87.06 E-value=1.1 Score=43.62 Aligned_cols=70 Identities=19% Similarity=0.205 Sum_probs=39.5
Q ss_pred eEEEEecCCCCHH----------HHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCCh-----HHHHHHHHHHHHHH
Q 041373 59 RLIAIGDLHGDLE----------KSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDE-----IKILYLLEKLKREA 123 (395)
Q Consensus 59 ~i~vigDiHG~~~----------~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s-----~evl~~l~~l~~~a 123 (395)
+|+.++|+||.+. .+..+++.+.-.... .+++..++-.||++-..+.+ .-+++.+..+
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~---~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~---- 74 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAA---QGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLV---- 74 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhc---cCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhh----
Confidence 5788999999742 345555543211000 02346789999999543422 2334444444
Q ss_pred hhcCCeEEEeCCCcch
Q 041373 124 EKSGGKFITMNGNHEI 139 (395)
Q Consensus 124 ~~~~~~v~~l~GNHE~ 139 (395)
+-.+. ..||||.
T Consensus 75 ---g~Da~-~~GNHEf 86 (285)
T cd07405 75 ---GYDAM-AVGNHEF 86 (285)
T ss_pred ---CCcEE-eeccccc
Confidence 33444 5599995
No 111
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=85.21 E-value=1.6 Score=47.53 Aligned_cols=68 Identities=19% Similarity=0.266 Sum_probs=44.3
Q ss_pred CCeEEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChH----------
Q 041373 57 VDRLIAIGDLHGDLE----------------KSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEI---------- 110 (395)
Q Consensus 57 ~~~i~vigDiHG~~~----------------~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~---------- 110 (395)
..+|+-..|+||++. .+..+++++.-. .++..++-.||++...|.+-
T Consensus 25 ~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e-------~~n~llvD~GD~~qGsp~~~~~~~~~~~~g 97 (649)
T PRK09420 25 DLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAE-------AKNSVLVDNGDLIQGSPLGDYMAAKGLKAG 97 (649)
T ss_pred eEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHh-------CCCEEEEECCCcCCCchhhhhhhhccccCC
Confidence 458999999999863 344555543211 13468999999999766432
Q ss_pred ---HHHHHHHHHHHHHhhcCCeEEEeCCCcch
Q 041373 111 ---KILYLLEKLKREAEKSGGKFITMNGNHEI 139 (395)
Q Consensus 111 ---evl~~l~~l~~~a~~~~~~v~~l~GNHE~ 139 (395)
-+++.+-.+. --....||||.
T Consensus 98 ~~~p~i~amN~lg--------yDa~tlGNHEF 121 (649)
T PRK09420 98 DVHPVYKAMNTLD--------YDVGNLGNHEF 121 (649)
T ss_pred CcchHHHHHHhcC--------CcEEeccchhh
Confidence 2455555552 33678999994
No 112
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=84.61 E-value=2.3 Score=43.63 Aligned_cols=70 Identities=10% Similarity=0.212 Sum_probs=52.4
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCc
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNH 137 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNH 137 (395)
.+|.||||+-|+++.|.+-++.+.-. .|+=+.++++|++++-..+..|++.+....+. .|-.++++-+|-
T Consensus 6 ~kILv~Gd~~Gr~~eli~rI~~v~Kk------~GpFd~liCvGnfF~~~~~~~e~~~ykng~~~----vPiptY~~g~~~ 75 (528)
T KOG2476|consen 6 AKILVCGDVEGRFDELIKRIQKVNKK------SGPFDLLICVGNFFGHDTQNAEVEKYKNGTKK----VPIPTYFLGDNA 75 (528)
T ss_pred ceEEEEcCccccHHHHHHHHHHHhhc------CCCceEEEEecccCCCccchhHHHHHhcCCcc----CceeEEEecCCC
Confidence 68999999999999887766654322 23346799999999987788888877766543 566777777665
No 113
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=84.41 E-value=1.3 Score=47.85 Aligned_cols=66 Identities=23% Similarity=0.291 Sum_probs=42.1
Q ss_pred eEEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChH------------
Q 041373 59 RLIAIGDLHGDLE----------------KSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEI------------ 110 (395)
Q Consensus 59 ~i~vigDiHG~~~----------------~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~------------ 110 (395)
+|+-+.|+||++. .+..+++.+.-. .++..++-.||++...+.+-
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e-------~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~ 76 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAE-------VKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQM 76 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhh-------CCCeEEEECCCcCCCccchhhhhhccccCCCc
Confidence 6888999999863 445555543211 12468999999999665442
Q ss_pred -HHHHHHHHHHHHHhhcCCeEEEeCCCcch
Q 041373 111 -KILYLLEKLKREAEKSGGKFITMNGNHEI 139 (395)
Q Consensus 111 -evl~~l~~l~~~a~~~~~~v~~l~GNHE~ 139 (395)
-+++.+-.+. -=....||||.
T Consensus 77 ~p~~~~mN~lg--------yDa~tlGNHEF 98 (626)
T TIGR01390 77 HPVYKAMNLLK--------YDVGNLGNHEF 98 (626)
T ss_pred ChHHHHHhhcC--------ccEEecccccc
Confidence 2444444442 22578999994
No 114
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=83.96 E-value=0.66 Score=38.81 Aligned_cols=114 Identities=18% Similarity=0.112 Sum_probs=58.6
Q ss_pred HHHHhhcCceEEEeCC-EEEE-ecCCCCCccccChhhhhHHHHHHHhccc-CCCCCCCcCC-C---Ccccccccccchhh
Q 041373 216 ARRFLSENTTVLVVGD-SVFV-HGGLLKQHVEYGLERINREVRDWINGLM-GKSAPGYCKG-R---HAVVWLRKFSDEEK 288 (395)
Q Consensus 216 ~~~~L~~lP~~~~~~~-~lfv-HAGl~p~~~~~~le~~n~~~~~wi~~~~-~~~~p~~~~~-~---~~~lW~R~~~~~~~ 288 (395)
..+|++.+|+...... .+++ |++++|.+. .-+..++...+.-..... ....+..++. . ....|.+.....
T Consensus 29 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~w~~~~~g~-- 105 (155)
T COG0639 29 GLETFDSLPLAAVAEGGKLLCHHGGLSPGLD-RLLDIIEVLDRLRACEVPHAGHTHDLLWSDPDGGDRRIWNPGPRGV-- 105 (155)
T ss_pred hhhHHHhhhHHHHhcCCceeeecCCCCcchh-hhHHHHHHHhhhhcccCCCccccccccCCCCCCCcccccccCCCCC--
Confidence 5678888998887765 5555 666666421 112222221111000000 0111111111 1 246676654321
Q ss_pred hcchHHHHHHHhcCCC-CcEEEEc--ccCCCCCcccccCCcEEEEecCCccccCCCcceEEEEeC
Q 041373 289 KCDCSALEHALATIPG-VKRMIMG--HTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEING 350 (395)
Q Consensus 289 ~~~~~~l~~~L~~~~g-~~~vV~G--HT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~lt~L~I~~ 350 (395)
...+ ..++++| ||+.. + ...+..+.+|+||.++. |.++++...+
T Consensus 106 ------------~~~~~~~~~~f~~~~~~~~--~--~~~~~~~~~d~~~~~~~--~~lt~~~~~~ 152 (155)
T COG0639 106 ------------PRDGGDVTAVFGIVHTPKL--I--ERAHVLYDIDTGAVFGG--GLLTAFSAPN 152 (155)
T ss_pred ------------CccccchhhHHhhhcccce--E--EEEeEEEecCceEEeCC--CeeeEEeccc
Confidence 0112 4678899 77764 2 22445689999998842 8888877663
No 115
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=83.76 E-value=1.3 Score=46.72 Aligned_cols=68 Identities=24% Similarity=0.302 Sum_probs=44.9
Q ss_pred CCeEEEEecCCCCHH---------------HHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCC------ChHHHHHH
Q 041373 57 VDRLIAIGDLHGDLE---------------KSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGD------DEIKILYL 115 (395)
Q Consensus 57 ~~~i~vigDiHG~~~---------------~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~------~s~evl~~ 115 (395)
.-+|+-+.|+||.+. .+..++++..-.. ++..+|-.||++++.+ ....+++.
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~-------~~~llld~GD~~~G~~l~~~~~~g~~~~~~ 98 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAEN-------KNVLLLDAGDLIQGSPLSDYLTKGEPTVDL 98 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhc-------CCeEEEeCCcccCCccccccccCCChHHHH
Confidence 347899999999988 3334443322111 2457999999999844 33446666
Q ss_pred HHHHHHHHhhcCCeEEEeCCCcch
Q 041373 116 LEKLKREAEKSGGKFITMNGNHEI 139 (395)
Q Consensus 116 l~~l~~~a~~~~~~v~~l~GNHE~ 139 (395)
+-.+.- =....||||.
T Consensus 99 mN~m~y--------Da~tiGNHEF 114 (517)
T COG0737 99 LNALGY--------DAMTLGNHEF 114 (517)
T ss_pred HhhcCC--------cEEeeccccc
Confidence 666632 2678899996
No 116
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=82.84 E-value=2.1 Score=41.24 Aligned_cols=73 Identities=22% Similarity=0.399 Sum_probs=45.8
Q ss_pred CCCCeEEEEec--CCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCccc-CCCCCh---------HHHHHHHHHHHHH
Q 041373 55 PRVDRLIAIGD--LHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVL-DRGDDE---------IKILYLLEKLKRE 122 (395)
Q Consensus 55 ~~~~~i~vigD--iHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~v-DrG~~s---------~evl~~l~~l~~~ 122 (395)
...-+++|||| -+|-+..-+.++.....-+.- ..+-++.+||-+ |-|..+ -+-+..--.|++
T Consensus 41 dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l-----~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQk- 114 (336)
T KOG2679|consen 41 DGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKL-----DIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQK- 114 (336)
T ss_pred CCceEEEEEcccccCCchhHHHHHHHHHhHHHhc-----cceEEEecCCcccccCCCCCCChhHHhhhhhcccCccccc-
Confidence 34458999999 689888777666542211111 224699999976 666533 333333334432
Q ss_pred HhhcCCeEEEeCCCcch
Q 041373 123 AEKSGGKFITMNGNHEI 139 (395)
Q Consensus 123 a~~~~~~v~~l~GNHE~ 139 (395)
..+.+.||||.
T Consensus 115 ------pWy~vlGNHDy 125 (336)
T KOG2679|consen 115 ------PWYSVLGNHDY 125 (336)
T ss_pred ------chhhhccCccc
Confidence 56899999995
No 117
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=82.65 E-value=5.7 Score=38.14 Aligned_cols=81 Identities=14% Similarity=0.198 Sum_probs=41.4
Q ss_pred EEEEecCC-CCH----HHHHHHHHHh-CCCC-CCCCC-CCCCcEEEEeCcccCCCCCh------------------HHHH
Q 041373 60 LIAIGDLH-GDL----EKSKQALRLA-GLIN-GSDQW-TGGTATVVQIGDVLDRGDDE------------------IKIL 113 (395)
Q Consensus 60 i~vigDiH-G~~----~~l~~ll~~~-~~~~-~~~~w-~~~~~~lv~lGD~vDrG~~s------------------~evl 113 (395)
+++|||+| |.- ..++.+.+-+ |... ..++. ...-.++|+.||.|+.-... .+-+
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 68899999 432 3333333322 2211 11111 22336899999999964321 2222
Q ss_pred HHHHHHHHHHhhcCCeEEEeCCCcchhh
Q 041373 114 YLLEKLKREAEKSGGKFITMNGNHEIMN 141 (395)
Q Consensus 114 ~~l~~l~~~a~~~~~~v~~l~GNHE~~~ 141 (395)
+.+-.+-.+- ..--.|.+++||||-..
T Consensus 82 ~~ld~~l~~l-~~~i~V~imPG~~Dp~~ 108 (257)
T cd07387 82 KELDNFLSQL-ASSVPVDLMPGEFDPAN 108 (257)
T ss_pred HHHHHHHHhh-hcCCeEEECCCCCCccc
Confidence 2222221110 12337899999999644
No 118
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=82.01 E-value=2.1 Score=49.74 Aligned_cols=68 Identities=21% Similarity=0.274 Sum_probs=41.8
Q ss_pred CCeEEEEecCCCCH----------------HHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCCh-----------
Q 041373 57 VDRLIAIGDLHGDL----------------EKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDE----------- 109 (395)
Q Consensus 57 ~~~i~vigDiHG~~----------------~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s----------- 109 (395)
.-+|+.++|+||++ ..+..+++.+.-. .+++.++-.||++...+.+
T Consensus 41 ~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~-------~~n~llld~GD~~qGs~l~~~~~~~~~~~~ 113 (1163)
T PRK09419 41 NIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKE-------NPNTLLVDNGDLIQGNPLGEYAVKDNILFK 113 (1163)
T ss_pred EEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHh-------CCCeEEEeCCCccCCChhhhHHhhhccccC
Confidence 35899999999985 3445555543211 1235677799999876521
Q ss_pred ---HHHHHHHHHHHHHHhhcCCeEEEeCCCcch
Q 041373 110 ---IKILYLLEKLKREAEKSGGKFITMNGNHEI 139 (395)
Q Consensus 110 ---~evl~~l~~l~~~a~~~~~~v~~l~GNHE~ 139 (395)
.-+++.+..+. --....||||.
T Consensus 114 ~~~~~~i~~mN~lg--------yDa~~lGNHEF 138 (1163)
T PRK09419 114 NKTHPMIKAMNALG--------YDAGTLGNHEF 138 (1163)
T ss_pred CCcCHHHHHHhhcC--------ccEEeeccccc
Confidence 23444444442 22567999995
No 119
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=80.62 E-value=2.8 Score=46.65 Aligned_cols=67 Identities=25% Similarity=0.246 Sum_probs=42.7
Q ss_pred CeEEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChH-----------
Q 041373 58 DRLIAIGDLHGDLE----------------KSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEI----------- 110 (395)
Q Consensus 58 ~~i~vigDiHG~~~----------------~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~----------- 110 (395)
-+|+-+.|+||++. .+..+++.+.-. .++..++..||++-.-|.+.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae-------~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g 188 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKE-------NPNVVLVDNGDTIQGTPLGTYKAIVDPVEEG 188 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHh-------CCCEEEEecCCCCCCCcccchhhhccccccC
Confidence 47899999999853 333444443211 13468999999998655431
Q ss_pred ---HHHHHHHHHHHHHhhcCCeEEEeCCCcch
Q 041373 111 ---KILYLLEKLKREAEKSGGKFITMNGNHEI 139 (395)
Q Consensus 111 ---evl~~l~~l~~~a~~~~~~v~~l~GNHE~ 139 (395)
-+++.+-.|. --....||||.
T Consensus 189 ~~~P~i~amN~LG--------yDA~tLGNHEF 212 (814)
T PRK11907 189 EQHPMYAALEALG--------FDAGTLGNHEF 212 (814)
T ss_pred cchHHHHHHhccC--------CCEEEechhhc
Confidence 2555555552 23678999994
No 120
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=80.05 E-value=3.5 Score=41.17 Aligned_cols=79 Identities=22% Similarity=0.241 Sum_probs=45.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccC-CCC---ChHHHHHHHHHHHHHH------hhcC
Q 041373 58 DRLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLD-RGD---DEIKILYLLEKLKREA------EKSG 127 (395)
Q Consensus 58 ~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vD-rG~---~s~evl~~l~~l~~~a------~~~~ 127 (395)
|||.|=|--||.++.+-+-+..+.... ..+.+.|+++||+=- |.- +++.|=-.-+++..-+ .+.|
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~-----~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~AP 75 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRG-----NTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAP 75 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcC-----CCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCc
Confidence 689999999999998875444332111 112358999999853 211 2222211111111111 1234
Q ss_pred CeEEEeCCCcchhh
Q 041373 128 GKFITMNGNHEIMN 141 (395)
Q Consensus 128 ~~v~~l~GNHE~~~ 141 (395)
---++|-||||.++
T Consensus 76 VlTIFIGGNHEAsn 89 (456)
T KOG2863|consen 76 VLTIFIGGNHEASN 89 (456)
T ss_pred eeEEEecCchHHHH
Confidence 45588999999876
No 121
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=79.83 E-value=3.9 Score=43.60 Aligned_cols=39 Identities=23% Similarity=0.072 Sum_probs=25.8
Q ss_pred CcEEEEeCcccCCCCCh-----HHHHHHHHHHHHHHhhcCCeEEEeCCCcch
Q 041373 93 TATVVQIGDVLDRGDDE-----IKILYLLEKLKREAEKSGGKFITMNGNHEI 139 (395)
Q Consensus 93 ~~~lv~lGD~vDrG~~s-----~evl~~l~~l~~~a~~~~~~v~~l~GNHE~ 139 (395)
+..++..||.+...+.+ ..+++.+-.+. --....||||.
T Consensus 50 n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g--------~Da~~lGNHEF 93 (550)
T TIGR01530 50 NALVLHAGDAIIGTLYFTLFGGRADAALMNAAG--------FDFFTLGNHEF 93 (550)
T ss_pred CeEEEECCCCCCCccchhhcCCHHHHHHHhccC--------CCEEEeccccc
Confidence 46789999999865533 23454444442 23788999994
No 122
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=79.48 E-value=0.91 Score=48.29 Aligned_cols=72 Identities=18% Similarity=0.167 Sum_probs=40.7
Q ss_pred CCeEEEEecCCCCHH----------HHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCCh-----HHHHHHHHHHHH
Q 041373 57 VDRLIAIGDLHGDLE----------KSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDE-----IKILYLLEKLKR 121 (395)
Q Consensus 57 ~~~i~vigDiHG~~~----------~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s-----~evl~~l~~l~~ 121 (395)
.-.|+-+.|+||.+. .+..+++...-..+ -..++..++..||++...+.+ .-+++.+-.+
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~---~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~-- 108 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVA---AEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLI-- 108 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhh---ccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcC--
Confidence 457899999999864 23344443221100 012346789999999754432 2234444444
Q ss_pred HHhhcCCeEEEeCCCcch
Q 041373 122 EAEKSGGKFITMNGNHEI 139 (395)
Q Consensus 122 ~a~~~~~~v~~l~GNHE~ 139 (395)
+-.+ ...||||.
T Consensus 109 -----g~Da-~tlGNHEF 120 (551)
T PRK09558 109 -----GYDA-MAVGNHEF 120 (551)
T ss_pred -----CCCE-Eccccccc
Confidence 2344 45699994
No 123
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=79.06 E-value=4.3 Score=37.06 Aligned_cols=76 Identities=14% Similarity=0.152 Sum_probs=37.3
Q ss_pred EEEEecCCCC-----HHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChH----------HHHHHHHHHHHHHh
Q 041373 60 LIAIGDLHGD-----LEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEI----------KILYLLEKLKREAE 124 (395)
Q Consensus 60 i~vigDiHG~-----~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~----------evl~~l~~l~~~a~ 124 (395)
|++++|+|-. ++.|.++|..+. .+ .....+|++|+++|.-.... .....+..+.....
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~--~~-----~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVE--DA-----SKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLE 73 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCC--HC-----TTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHC
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhcc--cc-----CCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHh
Confidence 5788998844 555666665432 01 12357999999999633221 11112222211111
Q ss_pred --hcCCeEEEeCCCcchhhh
Q 041373 125 --KSGGKFITMNGNHEIMNI 142 (395)
Q Consensus 125 --~~~~~v~~l~GNHE~~~l 142 (395)
....+|++++|+||....
T Consensus 74 ~i~~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 74 SILPSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp CCHCCSEEEEE--TTCTT-S
T ss_pred hcccccEEEEeCCCcccccc
Confidence 123589999999996543
No 124
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=77.23 E-value=17 Score=35.56 Aligned_cols=82 Identities=15% Similarity=0.084 Sum_probs=47.0
Q ss_pred CCCCeEEEEecCCCC----HHHHHHHHHHh-CCCCCCCCCCCCCcEEEEeCcccCCC----CChH----HHHHHHHHH-H
Q 041373 55 PRVDRLIAIGDLHGD----LEKSKQALRLA-GLINGSDQWTGGTATVVQIGDVLDRG----DDEI----KILYLLEKL-K 120 (395)
Q Consensus 55 ~~~~~i~vigDiHG~----~~~l~~ll~~~-~~~~~~~~w~~~~~~lv~lGD~vDrG----~~s~----evl~~l~~l-~ 120 (395)
+...+++++||+|=+ +++|.++|+.. +..+++. ....+|+.|+++-+. ..+. +-.+.|..+ .
T Consensus 25 ~~~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~----~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~lll 100 (291)
T PTZ00235 25 DKRHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENE----LPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLI 100 (291)
T ss_pred CCceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccC----CCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHH
Confidence 445689999999954 66777777654 2112111 245799999999763 2222 222222221 0
Q ss_pred HHH--hhcCCeEEEeCCCcchh
Q 041373 121 REA--EKSGGKFITMNGNHEIM 140 (395)
Q Consensus 121 ~~a--~~~~~~v~~l~GNHE~~ 140 (395)
... -....++++|+|-.|-.
T Consensus 101 s~fp~L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 101 SKFKLILEHCYLIFIPGINDPC 122 (291)
T ss_pred HhChHHHhcCeEEEECCCCCCC
Confidence 000 01235899999999964
No 125
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=74.94 E-value=4.3 Score=38.23 Aligned_cols=46 Identities=28% Similarity=0.474 Sum_probs=25.3
Q ss_pred cEEEEeCccc-CCCC---ChHHHHHHHHHHHHHH----hhcCCeEEEeCCCcch
Q 041373 94 ATVVQIGDVL-DRGD---DEIKILYLLEKLKREA----EKSGGKFITMNGNHEI 139 (395)
Q Consensus 94 ~~lv~lGD~v-DrG~---~s~evl~~l~~l~~~a----~~~~~~v~~l~GNHE~ 139 (395)
+-.+||||-. ||=+ ...=+|.+|.++.... .+-..+|+++.||||.
T Consensus 86 tpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhei 139 (318)
T PF13258_consen 86 TPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEI 139 (318)
T ss_pred ccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCcee
Confidence 3467888865 3321 1123455555443210 0023589999999996
No 126
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=72.44 E-value=5 Score=44.54 Aligned_cols=68 Identities=21% Similarity=0.227 Sum_probs=41.7
Q ss_pred CCeEEEEecCCCCHHH----------------HHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCCh-----------
Q 041373 57 VDRLIAIGDLHGDLEK----------------SKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDE----------- 109 (395)
Q Consensus 57 ~~~i~vigDiHG~~~~----------------l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s----------- 109 (395)
.-+|+-+.|+||++.. +..+++++.-. .+++.++-.||++-.-+.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e-------~~ntlllD~GD~iqGspl~~~~~~~~~~~~ 111 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREE-------AKNSVLFDDGDALQGTPLGDYVANKINDPK 111 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHh-------CCCeEEEECCCCCCCchHHHHHhhcccccc
Confidence 4589999999998532 34444433211 1346899999999654432
Q ss_pred --------HHHHHHHHHHHHHHhhcCCeEEEeCCCcch
Q 041373 110 --------IKILYLLEKLKREAEKSGGKFITMNGNHEI 139 (395)
Q Consensus 110 --------~evl~~l~~l~~~a~~~~~~v~~l~GNHE~ 139 (395)
.-+++.+-.+. -=....||||.
T Consensus 112 ~~~~~~~~~p~i~~mN~lg--------yDa~tlGNHEF 141 (780)
T PRK09418 112 KPVDPSYTHPLYRLMNLMK--------YDVISLGNHEF 141 (780)
T ss_pred cccccccchHHHHHHhccC--------CCEEecccccc
Confidence 12444444442 22678999994
No 127
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=71.72 E-value=6.3 Score=40.17 Aligned_cols=74 Identities=15% Similarity=0.144 Sum_probs=39.9
Q ss_pred CCeEEEEecCC-CCHHHH--HHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHH------HHHHHHHHHHHhhcC
Q 041373 57 VDRLIAIGDLH-GDLEKS--KQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKI------LYLLEKLKREAEKSG 127 (395)
Q Consensus 57 ~~~i~vigDiH-G~~~~l--~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~ev------l~~l~~l~~~a~~~~ 127 (395)
.-+.+++||-= |..... .+.+....-.. +.+-++.+||.++.|..+..= .+.+..-... .-.
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~-------~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~--~L~ 96 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNE-------RVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESG--DMQ 96 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhC-------CCCEEEECCccccCCCCCccchhHHhhHhhhccCcch--hhC
Confidence 34899999953 322211 22222211111 234699999999888765432 2333221100 012
Q ss_pred CeEEEeCCCcch
Q 041373 128 GKFITMNGNHEI 139 (395)
Q Consensus 128 ~~v~~l~GNHE~ 139 (395)
..++.++||||.
T Consensus 97 ~Pwy~vLGNHDy 108 (394)
T PTZ00422 97 IPFFTVLGQADW 108 (394)
T ss_pred CCeEEeCCcccc
Confidence 378999999995
No 128
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=67.36 E-value=9.1 Score=39.51 Aligned_cols=38 Identities=18% Similarity=0.258 Sum_probs=25.5
Q ss_pred HHHHHHhcCCCCcEEEEcccCCCCCcccccCCcEEEEecC
Q 041373 294 ALEHALATIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVG 333 (395)
Q Consensus 294 ~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG 333 (395)
.|+.+|-.. +++.++.||-+.-+......+. ...+..|
T Consensus 323 ~LE~l~~~~-~VDvvf~GHvH~YER~~piyn~-~~~~~~~ 360 (452)
T KOG1378|consen 323 GLEPLFVKY-KVDVVFWGHVHRYERFCPIYNN-TCGTGWG 360 (452)
T ss_pred HHHHHHHHh-ceeEEEeccceehhccchhhcc-eeeccCC
Confidence 577777764 8999999999987543333333 3445455
No 129
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=63.50 E-value=19 Score=38.07 Aligned_cols=61 Identities=18% Similarity=0.188 Sum_probs=47.8
Q ss_pred CCCCCeEEEEecCC------------CCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHH
Q 041373 54 LPRVDRLIAIGDLH------------GDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKR 121 (395)
Q Consensus 54 ~~~~~~i~vigDiH------------G~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~ 121 (395)
++...||.|-.|+| -.+..|.++|..+.-.+- +.+++-||++.-..-|..+|..+.++-+
T Consensus 10 ~entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~V--------DmiLlGGDLFHeNkPSr~~L~~~i~lLR 81 (646)
T KOG2310|consen 10 FENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDV--------DMILLGGDLFHENKPSRKTLHRCLELLR 81 (646)
T ss_pred cccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCC--------cEEEecCcccccCCccHHHHHHHHHHHH
Confidence 46778999999999 236788899987653332 3588999999988889998888887766
Q ss_pred H
Q 041373 122 E 122 (395)
Q Consensus 122 ~ 122 (395)
.
T Consensus 82 r 82 (646)
T KOG2310|consen 82 R 82 (646)
T ss_pred H
Confidence 4
No 130
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=57.50 E-value=28 Score=32.35 Aligned_cols=54 Identities=26% Similarity=0.401 Sum_probs=32.7
Q ss_pred HHHHHHHhcCCCCcEEEEcccCCCCCccccc-C-CcEEEEecCCccccCCCcceEEEEeCCC
Q 041373 293 SALEHALATIPGVKRMIMGHTIQEKGINAVC-D-NRAIRIDVGLSRGCYDGLPEVLEINGNS 352 (395)
Q Consensus 293 ~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~~-~-~~~i~IDtG~~~g~~~G~lt~L~I~~~~ 352 (395)
..+.+.+... +.+++|+|||+.+. +...- + ....++-+|... + ..++++++.+|
T Consensus 175 ~~~~~~~~~~-~~~~~i~GHtH~~~-~~~~~~~~~~~~~~~lgdW~-~---~~~~~~~~~~g 230 (231)
T TIGR01854 175 AEVAAVMRRY-GVDRLIHGHTHRPA-IHPLQADGQPATRIVLGDWY-R---QGSILRVDADG 230 (231)
T ss_pred HHHHHHHHHc-CCCEEEECCccCcc-eeecccCCCccEEEEECCCc-c---CCeEEEEcCCC
Confidence 3455555554 78899999999984 32211 1 123567777754 1 35777777544
No 131
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=55.44 E-value=10 Score=40.56 Aligned_cols=43 Identities=28% Similarity=0.382 Sum_probs=37.5
Q ss_pred CcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcchhhhh
Q 041373 93 TATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHEIMNIE 143 (395)
Q Consensus 93 ~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE~~~l~ 143 (395)
-++|-++||+.||||.+-.+++.|+... +|-+--||||...+.
T Consensus 185 VDhLHIvGDIyDRGp~pd~ImD~Lm~~h--------svDIQWGNHDIlWMG 227 (640)
T PF06874_consen 185 VDHLHIVGDIYDRGPRPDKIMDRLMNYH--------SVDIQWGNHDILWMG 227 (640)
T ss_pred hhheeecccccCCCCChhHHHHHHhcCC--------CccccccchHHHHHH
Confidence 3678899999999999999999999874 688889999987665
No 132
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=55.23 E-value=21 Score=30.10 Aligned_cols=40 Identities=23% Similarity=0.175 Sum_probs=24.1
Q ss_pred HHHHHHhcCCCCcEEEEcccCCCCCccc-ccCCcEEEEecCC
Q 041373 294 ALEHALATIPGVKRMIMGHTIQEKGINA-VCDNRAIRIDVGL 334 (395)
Q Consensus 294 ~l~~~L~~~~g~~~vV~GHT~~~~gi~~-~~~~~~i~IDtG~ 334 (395)
.+.+.+.+. +.+.+++||++....... ...+..+.|.+|+
T Consensus 104 ~~~~~l~~~-~~~~~l~GH~H~~~~~~~~~~~~~~~~~~aGs 144 (144)
T cd07400 104 DALKLLAEA-GVDLVLHGHKHVPYVGNISNAGGGLVVIGAGT 144 (144)
T ss_pred HHHHHHHHc-CCCEEEECCCCCcCeeeccCCCCCEEEEecCC
Confidence 345556654 789999999999842110 1133456666553
No 133
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.76 E-value=32 Score=32.58 Aligned_cols=48 Identities=25% Similarity=0.344 Sum_probs=32.4
Q ss_pred CCCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCCcceEEEEeCCCcEEEEe
Q 041373 303 PGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEINGNSELLVLT 358 (395)
Q Consensus 303 ~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~lt~L~I~~~~~~~v~~ 358 (395)
.+++.||+|||+.+. +.. .++ ..+|.+|....| -+++++.. +..+.++
T Consensus 186 ~~vd~vI~GH~Hr~a-i~~-i~~-~~yi~lGdW~~~----~s~~~v~~-~~~~~~~ 233 (237)
T COG2908 186 HGVDGVIHGHTHRPA-IHN-IPG-ITYINLGDWVSE----GSILEVDD-GGLELIQ 233 (237)
T ss_pred cCCCEEEecCcccHh-hcc-CCC-ceEEecCcchhc----ceEEEEec-CcEEEee
Confidence 489999999999985 322 233 578888886632 36788885 5555544
No 134
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=50.52 E-value=5.1 Score=41.40 Aligned_cols=74 Identities=19% Similarity=0.140 Sum_probs=59.5
Q ss_pred eEEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEeCCCcc
Q 041373 59 RLIAIGDLHGDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITMNGNHE 138 (395)
Q Consensus 59 ~i~vigDiHG~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l~GNHE 138 (395)
-.+.++|.||...++.++++.- +.. ...+++-|++++++....+.+.-+...+.. .|.+..+.+++||
T Consensus 47 a~lK~e~~~~Al~Da~kaie~d---P~~------~K~Y~rrg~a~m~l~~~~~A~~~l~~~~~l---~Pnd~~~~r~~~E 114 (476)
T KOG0376|consen 47 AHLKVESFGGALHDALKAIELD---PTY------IKAYVRRGTAVMALGEFKKALLDLEKVKKL---APNDPDATRKIDE 114 (476)
T ss_pred hheeechhhhHHHHHHhhhhcC---chh------hheeeeccHHHHhHHHHHHHHHHHHHhhhc---CcCcHHHHHHHHH
Confidence 4688999999999998888742 222 235999999999999999888877777665 7889999999999
Q ss_pred hhhhhh
Q 041373 139 IMNIEA 144 (395)
Q Consensus 139 ~~~l~~ 144 (395)
+..+-.
T Consensus 115 c~~~vs 120 (476)
T KOG0376|consen 115 CNKIVS 120 (476)
T ss_pred HHHHHH
Confidence 876543
No 135
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=50.45 E-value=58 Score=34.24 Aligned_cols=68 Identities=21% Similarity=0.242 Sum_probs=48.7
Q ss_pred hHHHHHHHhcCCCCcEEEEcccCCCCCcccc-------cCCcEEEEecCCccccCCCcceEEEEeC--CCcEEEEecCC
Q 041373 292 CSALEHALATIPGVKRMIMGHTIQEKGINAV-------CDNRAIRIDVGLSRGCYDGLPEVLEING--NSELLVLTANP 361 (395)
Q Consensus 292 ~~~l~~~L~~~~g~~~vV~GHT~~~~gi~~~-------~~~~~i~IDtG~~~g~~~G~lt~L~I~~--~~~~~v~~~~~ 361 (395)
.+++.+.|.+.++++.+++||+++.. +... .+...+=|-|++..- +-.+.-++||.. ++.+.|+++.-
T Consensus 368 ~~eLldLL~~ypnV~aVfsGHvH~n~-i~~~~~~~~~~p~~gfweI~TaSlvd-fPq~~Ri~Ei~~n~dgt~si~tt~v 444 (496)
T TIGR03767 368 GTELVSLLLEHPNVLAWVNGHTHSNK-ITAHRRVEGVGKDKGFWEINTASHID-FPQQGRIIELADNQDGTVSIFTTLI 444 (496)
T ss_pred HHHHHHHHhcCCCceEEEECCcCCCc-cccccCCCCCCCcCCeEEEecccccc-CCCCceEEEEEeCCCCcEEEEEEec
Confidence 45778888887789999999999874 2111 123578899988553 245667788863 78899998864
No 136
>COG3207 DIT1 Pyoverdine/dityrosine biosynthesis protein [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=38.58 E-value=44 Score=32.25 Aligned_cols=42 Identities=12% Similarity=0.108 Sum_probs=31.4
Q ss_pred CCCCCCeEEEEecCCC-------------C-HHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcc
Q 041373 53 RLPRVDRLIAIGDLHG-------------D-LEKSKQALRLAGLINGSDQWTGGTATVVQIGDV 102 (395)
Q Consensus 53 ~~~~~~~i~vigDiHG-------------~-~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~ 102 (395)
..+++++|+|++|=|- . -++|..+.+.++..... .++++||+
T Consensus 101 ~Y~PG~ki~I~SDghvFsD~I~Vdddh~s~Y~d~Lr~m~~~i~~~~i~--------kI~n~e~~ 156 (330)
T COG3207 101 FYAPGAKITICSDGHVFSDLIRVDDDHISAYQDALRLMIEEIGATHIG--------KIFNLEDV 156 (330)
T ss_pred hcCCCCEEEEEeCCceehhhccccchhHHHHHHHHHHHHHHcCCCCcc--------ceeecchh
Confidence 5788999999999881 1 36778888888766543 48888874
No 137
>KOG3818 consensus DNA polymerase epsilon, subunit B [Replication, recombination and repair]
Probab=36.16 E-value=2.2e+02 Score=29.56 Aligned_cols=78 Identities=17% Similarity=0.201 Sum_probs=46.6
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHh--CCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhh--------c
Q 041373 57 VDRLIAIGDLHGDLEKSKQALRLA--GLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEK--------S 126 (395)
Q Consensus 57 ~~~i~vigDiHG~~~~l~~ll~~~--~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~--------~ 126 (395)
...+++++|+|=+-...++.|+++ |+.+ .+.+.+|+.|-+.-+.-..-++..+...+...|.. .
T Consensus 282 d~~fVfLSdV~LD~~~vm~aL~kifqgy~~------~pP~~iIlcG~FtS~p~~~~s~~~~k~~f~~LA~~l~~~~~~~e 355 (525)
T KOG3818|consen 282 DTSFVFLSDVFLDDKKVMEALRKIFQGYKD------APPTAIILCGSFTSSPRQTSSSDQLKDGFRWLAAQLTCFRKDYE 355 (525)
T ss_pred CceEEEEehhccccHHHHHHHHHHHhhccC------CCCeEEEEeccccccccccchHHHHHHHHHHHHhhccccccccc
Confidence 346788899997765555555443 4433 24567999999987654444444444444333322 1
Q ss_pred CCeEEEeCCCcchh
Q 041373 127 GGKFITMNGNHEIM 140 (395)
Q Consensus 127 ~~~v~~l~GNHE~~ 140 (395)
..++++|+|-.|-.
T Consensus 356 kT~fIFVPGP~Dp~ 369 (525)
T KOG3818|consen 356 KTQFIFVPGPNDPW 369 (525)
T ss_pred cceEEEecCCCCCC
Confidence 24678888877743
No 138
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.94 E-value=25 Score=34.83 Aligned_cols=57 Identities=21% Similarity=0.292 Sum_probs=40.1
Q ss_pred CCCCCCCCeEEEEecCC-CCHHHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccC--CCCChHHHHHHHHHHHHH
Q 041373 51 TTRLPRVDRLIAIGDLH-GDLEKSKQALRLAGLINGSDQWTGGTATVVQIGDVLD--RGDDEIKILYLLEKLKRE 122 (395)
Q Consensus 51 ~~~~~~~~~i~vigDiH-G~~~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vD--rG~~s~evl~~l~~l~~~ 122 (395)
|+.+|+...+++|||.| |+|.++... +.. .++-.-||=. =|+....++.+..+|...
T Consensus 50 p~~lp~~p~tw~cGD~HLgN~ga~~~~--------~G~-------V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~a 109 (410)
T COG4320 50 PWSLPKTPFTWLCGDAHLGNFGAARNS--------KGN-------VVFKIADFDEGHLGQYIWDLVRLAVSLVLA 109 (410)
T ss_pred ccccCCCCceEEecccccccchhhccC--------CCc-------eEEEecccchhhccchHHHHHHHHHHHHHH
Confidence 47789999999999999 888876431 111 3555666532 277888888888888654
No 139
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=29.58 E-value=1.3e+02 Score=28.90 Aligned_cols=67 Identities=25% Similarity=0.226 Sum_probs=40.0
Q ss_pred CeEEEEecCCCCH--HHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCC-ChHHHHHHHHHHHHHHhhcCCeEEEeC
Q 041373 58 DRLIAIGDLHGDL--EKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGD-DEIKILYLLEKLKREAEKSGGKFITMN 134 (395)
Q Consensus 58 ~~i~vigDiHG~~--~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~-~s~evl~~l~~l~~~a~~~~~~v~~l~ 134 (395)
||+.+||||=|.. ..+..-|..+.-.- .-+-+|.+|-..-.|. -..++...+++. |-. ++.+
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~ky-------k~dfvI~N~ENaa~G~Git~k~y~~l~~~-------G~d-viT~ 65 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKY-------KIDFVIVNGENAAGGFGITEKIYKELLEA-------GAD-VITL 65 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhh-------cCcEEEEcCccccCCcCCCHHHHHHHHHh-------CCC-EEec
Confidence 6899999999985 44444443322111 1135777887776554 344555555444 223 6789
Q ss_pred CCcch
Q 041373 135 GNHEI 139 (395)
Q Consensus 135 GNHE~ 139 (395)
|||=.
T Consensus 66 GNH~w 70 (266)
T COG1692 66 GNHTW 70 (266)
T ss_pred ccccc
Confidence 99974
No 140
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=29.34 E-value=2.5e+02 Score=24.73 Aligned_cols=60 Identities=20% Similarity=0.268 Sum_probs=39.0
Q ss_pred EEEecCCCCHHHHHHHHHH-hCC---CCCCCCCC-CCCcEEEEeCcccCCCCChHHHHHHHHHHH
Q 041373 61 IAIGDLHGDLEKSKQALRL-AGL---INGSDQWT-GGTATVVQIGDVLDRGDDEIKILYLLEKLK 120 (395)
Q Consensus 61 ~vigDiHG~~~~l~~ll~~-~~~---~~~~~~w~-~~~~~lv~lGD~vDrG~~s~evl~~l~~l~ 120 (395)
++.+=.+|+-..+.+.+.. ++- .+-...-. ..+.-+||+|=-+|+|.-+.++.++|..|+
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~ 66 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK 66 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc
Confidence 4555677887777665543 332 00000000 123459999999999999999999999984
No 141
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=29.00 E-value=2.2e+02 Score=24.93 Aligned_cols=63 Identities=22% Similarity=0.228 Sum_probs=40.0
Q ss_pred CCCeEEEEecCCCCH-HHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCChHHHHHHHHHHHHHHhhcCCeEEEe
Q 041373 56 RVDRLIAIGDLHGDL-EKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDEIKILYLLEKLKREAEKSGGKFITM 133 (395)
Q Consensus 56 ~~~~i~vigDiHG~~-~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s~evl~~l~~l~~~a~~~~~~v~~l 133 (395)
++.++.+|||.|++. ..+..++.+.|. .+.+++---=+-+...++++.+.+.... .++.+.+.
T Consensus 1 ~gl~i~~vGD~~~rv~~Sl~~~~~~~g~------------~~~~~~P~~~~~~~~~~~~~~~~~~~~~---~g~~i~~~ 64 (158)
T PF00185_consen 1 KGLKIAYVGDGHNRVAHSLIELLAKFGM------------EVVLIAPEGLRYPPDPEVLEKAKKNAKK---NGGKITIT 64 (158)
T ss_dssp TTEEEEEESSTTSHHHHHHHHHHHHTTS------------EEEEESSGGGGGSHHHHHHHHHHHHHHH---HTTEEEEE
T ss_pred CCCEEEEECCCCChHHHHHHHHHHHcCC------------EEEEECCCcccCCCCHHHHHHHHHHHHH---hCCCeEEE
Confidence 356899999988875 566777777764 2666654322223334677666666443 66677666
No 142
>PRK10413 hydrogenase 2 accessory protein HypG; Provisional
Probab=28.26 E-value=36 Score=26.76 Aligned_cols=13 Identities=38% Similarity=0.613 Sum_probs=11.4
Q ss_pred EEeCCEEEEecCC
Q 041373 227 LVVGDSVFVHGGL 239 (395)
Q Consensus 227 ~~~~~~lfvHAGl 239 (395)
..+|+|++||+|.
T Consensus 43 ~~vGDyVLVHaGf 55 (82)
T PRK10413 43 DLLGQWVLVHVGF 55 (82)
T ss_pred cccCCEEEEecch
Confidence 4689999999995
No 143
>PRK10409 hydrogenase assembly chaperone; Provisional
Probab=26.76 E-value=36 Score=27.29 Aligned_cols=13 Identities=46% Similarity=0.600 Sum_probs=11.4
Q ss_pred EEeCCEEEEecCC
Q 041373 227 LVVGDSVFVHGGL 239 (395)
Q Consensus 227 ~~~~~~lfvHAGl 239 (395)
..+|+|++||+|.
T Consensus 42 ~~vGDyVLVHaGf 54 (90)
T PRK10409 42 PRVGQWVLVHVGF 54 (90)
T ss_pred cCCCCEEEEecCh
Confidence 5689999999995
No 144
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=25.64 E-value=1.9e+02 Score=27.15 Aligned_cols=27 Identities=15% Similarity=0.165 Sum_probs=20.1
Q ss_pred CCcEEEEcccCCCCCcccccCCcEEEEe
Q 041373 304 GVKRMIMGHTIQEKGINAVCDNRAIRID 331 (395)
Q Consensus 304 g~~~vV~GHT~~~~gi~~~~~~~~i~ID 331 (395)
|.+.||-+|+++..++.. +.++.|.-.
T Consensus 216 GaDiIiG~HpHv~q~~E~-y~~~~I~YS 242 (250)
T PF09587_consen 216 GADIIIGHHPHVIQPVEI-YKGKPIFYS 242 (250)
T ss_pred CCCEEEeCCCCcccceEE-ECCEEEEEe
Confidence 889999999999877754 466665543
No 145
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=24.38 E-value=1.6e+02 Score=27.90 Aligned_cols=54 Identities=9% Similarity=0.081 Sum_probs=30.0
Q ss_pred cCCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCCcceEEEEeCCCcEEEEec
Q 041373 301 TIPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPEVLEINGNSELLVLTA 359 (395)
Q Consensus 301 ~~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~lt~L~I~~~~~~~v~~~ 359 (395)
.+++...|+.||++... ....+ ..+.+-+|+.. .+=|.+. |.++.++....++.
T Consensus 192 ~~~~iD~IlgGH~H~~~--~~~~~-~t~vv~~g~~g-~~vg~l~-l~~~~~~~~~~~~~ 245 (257)
T cd07406 192 EVPEIDLILGGHDHEYI--LVQVG-GTPIVKSGSDF-RTVYIIT-LTYDTKTRKVQVNS 245 (257)
T ss_pred hCCCCceEEecccceeE--eeeEC-CEEEEeCCcCc-ceEEEEE-EEEECCCCEEEEEE
Confidence 34688999999999863 22333 35666666532 2223332 44455455444443
No 146
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=23.28 E-value=1.7e+02 Score=27.53 Aligned_cols=42 Identities=19% Similarity=0.195 Sum_probs=25.6
Q ss_pred CCCCcEEEEcccCCCCCcccccCCcEEEEecCCccccCCCcce
Q 041373 302 IPGVKRMIMGHTIQEKGINAVCDNRAIRIDVGLSRGCYDGLPE 344 (395)
Q Consensus 302 ~~g~~~vV~GHT~~~~gi~~~~~~~~i~IDtG~~~g~~~G~lt 344 (395)
.++.+.||-||+++.........++++.+-+|+ +|.+-|.++
T Consensus 199 ~~giDvIigGH~H~~~~~~~~~~~~~~ivq~g~-~g~~vg~l~ 240 (257)
T cd07408 199 VTGIDLIIDGHSHTTIEIGKKDGNNVLLTQTGA-YLANIGEVT 240 (257)
T ss_pred CCCceEEEeCCCcccccCcccccCCeEEEcCCh-HHceEEEEE
Confidence 468999999999986421101234567777776 333334443
No 147
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=23.08 E-value=1.4e+02 Score=24.95 Aligned_cols=22 Identities=23% Similarity=0.202 Sum_probs=15.9
Q ss_pred HHHHHhcCCCCcEEEEcccCCCC
Q 041373 295 LEHALATIPGVKRMIMGHTIQEK 317 (395)
Q Consensus 295 l~~~L~~~~g~~~vV~GHT~~~~ 317 (395)
+.+.+.+. +.+.+++||++...
T Consensus 83 l~~~l~~~-~~~~vl~GH~H~~~ 104 (129)
T cd07403 83 FLDFIDRF-RPKLFIHGHTHLNY 104 (129)
T ss_pred HHHHHHHH-CCcEEEEcCcCCCc
Confidence 33444443 67899999999985
No 148
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=22.47 E-value=39 Score=35.07 Aligned_cols=47 Identities=26% Similarity=0.394 Sum_probs=33.5
Q ss_pred hHHHHHHHhcCCCCcEEEEcccCCCC--Cc-ccccCCcEEEEecCCcccc
Q 041373 292 CSALEHALATIPGVKRMIMGHTIQEK--GI-NAVCDNRAIRIDVGLSRGC 338 (395)
Q Consensus 292 ~~~l~~~L~~~~g~~~vV~GHT~~~~--gi-~~~~~~~~i~IDtG~~~g~ 338 (395)
|..+-+-++-.+..-+||-||||+.. |- +...+++.|.||.|-++.+
T Consensus 518 c~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFskAY 567 (648)
T COG3855 518 CRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSKAY 567 (648)
T ss_pred HHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhhhh
Confidence 44444444444456799999999985 32 3456899999999998865
No 149
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=21.97 E-value=2.3e+02 Score=26.28 Aligned_cols=26 Identities=23% Similarity=0.264 Sum_probs=18.9
Q ss_pred CCCcEEEEcccCCCCCcccccCCcEEE
Q 041373 303 PGVKRMIMGHTIQEKGINAVCDNRAIR 329 (395)
Q Consensus 303 ~g~~~vV~GHT~~~~gi~~~~~~~~i~ 329 (395)
.|.+.||-||+++..++.. .+++.|.
T Consensus 206 ~G~D~IiG~H~Hv~q~~E~-~~~~~I~ 231 (239)
T cd07381 206 AGADLVIGHHPHVLQGIEI-YKGKLIF 231 (239)
T ss_pred CCCCEEEcCCCCcCCCeEE-ECCEEEE
Confidence 3789999999999876643 4555444
No 150
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=21.33 E-value=2.4e+02 Score=26.82 Aligned_cols=66 Identities=26% Similarity=0.409 Sum_probs=40.0
Q ss_pred eEEEEecCCCCH----------------HHHHHHHHHhCCCCCCCCCCCCCcEEEEeCcccCCCCCh-----------HH
Q 041373 59 RLIAIGDLHGDL----------------EKSKQALRLAGLINGSDQWTGGTATVVQIGDVLDRGDDE-----------IK 111 (395)
Q Consensus 59 ~i~vigDiHG~~----------------~~l~~ll~~~~~~~~~~~w~~~~~~lv~lGD~vDrG~~s-----------~e 111 (395)
+|+.++|+||.+ ..+..+++.+.-.. ++..++..||+++..+.+ ..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~-------~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~ 74 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAEN-------PNTLLIDNGDTIQGSPLADYYAKIEDGDPHP 74 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcC-------CCeEEEeCCccCCccHHHHHhhhcccCCCCh
Confidence 588999999986 44566666543211 123344489999976522 23
Q ss_pred HHHHHHHHHHHHhhcCCeEEEeCCCcch
Q 041373 112 ILYLLEKLKREAEKSGGKFITMNGNHEI 139 (395)
Q Consensus 112 vl~~l~~l~~~a~~~~~~v~~l~GNHE~ 139 (395)
+++.+..+ +.. ++..||||.
T Consensus 75 ~~~~ln~~-------g~d-~~~lGNHe~ 94 (277)
T cd07410 75 MIAAMNAL-------GYD-AGTLGNHEF 94 (277)
T ss_pred HHHHHHhc-------CCC-EEeecccCc
Confidence 45555554 223 556699994
No 151
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=21.25 E-value=45 Score=25.16 Aligned_cols=13 Identities=54% Similarity=0.943 Sum_probs=9.8
Q ss_pred EEeCCEEEEecCC
Q 041373 227 LVVGDSVFVHGGL 239 (395)
Q Consensus 227 ~~~~~~lfvHAGl 239 (395)
...|+|++||+|.
T Consensus 38 v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 38 VKVGDYVLVHAGF 50 (68)
T ss_dssp B-TT-EEEEETTE
T ss_pred CCCCCEEEEecCh
Confidence 5689999999995
No 152
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=20.43 E-value=68 Score=25.91 Aligned_cols=28 Identities=11% Similarity=0.143 Sum_probs=16.0
Q ss_pred CCCCch--hHHHHHHHHHHHhhhcCCccCCC
Q 041373 10 LCKNVP--SLLSSFVDTFVDFTVSGGLFLPN 38 (395)
Q Consensus 10 ~~~~~~--~~~~~f~~~~~~~~~~~g~~~~~ 38 (395)
.-|.+. .+...|+++|+++++.| +.+|+
T Consensus 43 ~GP~l~~~~it~efv~~mie~FK~~-K~Lhk 72 (95)
T PF08321_consen 43 DGPRLEDEPITLEFVKAMIEWFKNQ-KKLHK 72 (95)
T ss_dssp -SS--BTTB--HHHHHHHHHHHHCT-----H
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhC-CCccH
Confidence 445555 68889999999999977 76775
Done!