Your job contains 1 sequence.
>041376
MADVLRSGIVHCNDTCGCPVPCPGGAACSCSTVAYSEYYHKCCSCGGHCSCNPCTCSKIQ
ANKIGKAHCSCGTACKCPT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041376
(79 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2058593 - symbol:AtMT4b "Arabidopsis thaliana ... 155 2.8e-11 1
UNIPROTKB|I3LQ45 - symbol:MT3 "Metallothionein" species:9... 52 0.00019 2
MGI|MGI:97173 - symbol:Mt3 "metallothionein 3" species:10... 52 0.00095 2
RGD|621252 - symbol:Mt3 "metallothionein 3" species:10116... 52 0.00095 2
>TAIR|locus:2058593 [details] [associations]
symbol:AtMT4b "Arabidopsis thaliana metallothionein 4b"
species:3702 "Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006829 "zinc ion transport"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0016114
"terpenoid biosynthetic process" evidence=RCA] InterPro:IPR000316
Pfam:PF02068 PRINTS:PR00877 GO:GO:0005634 GO:GO:0005737
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0046872
GO:GO:0008270 EMBL:AC002391 GO:GO:0006829 EMBL:Z27049 EMBL:Z29896
IPI:IPI00548215 PIR:T00508 RefSeq:NP_179905.1 UniGene:At.39319
ProteinModelPortal:Q42377 SMR:Q42377 EnsemblPlants:AT2G23240.1
GeneID:816856 KEGG:ath:AT2G23240 TAIR:At2g23240 eggNOG:NOG304685
HOGENOM:HOG000243560 InParanoid:Q42377 OMA:CNCASCA PhylomeDB:Q42377
ProtClustDB:CLSN2683807 ArrayExpress:Q42377 Genevestigator:Q42377
Uniprot:Q42377
Length = 85
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 31/83 (37%), Positives = 37/83 (44%)
Query: 1 MADVLR-SGIVHCNDTCGCPVPCPGGAACSCSTVAYSEXXXXXXXX---XXXXXXNPCTC 56
MAD + S CND CGCP PCPGG +C C ++ + NPC C
Sbjct: 1 MADTGKGSASASCNDRCGCPSPCPGGESCRCKMMSEASGGDQEHNTCPCGEHCGCNPCNC 60
Query: 57 SKIQANKIGKAHCSCGTACKCPT 79
K Q K C+CG C C T
Sbjct: 61 PKTQTQTSAKG-CTCGEGCTCAT 82
>UNIPROTKB|I3LQ45 [details] [associations]
symbol:MT3 "Metallothionein" species:9823 "Sus scrofa"
[GO:2000378 "negative regulation of reactive oxygen species
metabolic process" evidence=IEA] [GO:2000376 "positive regulation
of oxygen metabolic process" evidence=IEA] [GO:0097214 "positive
regulation of lysosomal membrane permeability" evidence=IEA]
[GO:0071732 "cellular response to nitric oxide" evidence=IEA]
[GO:0071456 "cellular response to hypoxia" evidence=IEA]
[GO:0071276 "cellular response to cadmium ion" evidence=IEA]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=IEA] [GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA]
[GO:0060547 "negative regulation of necrotic cell death"
evidence=IEA] [GO:0060049 "regulation of protein glycosylation"
evidence=IEA] [GO:0055073 "cadmium ion homeostasis" evidence=IEA]
[GO:0051354 "negative regulation of oxidoreductase activity"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0046870 "cadmium ion binding" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0044242 "cellular lipid catabolic process" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043491 "protein kinase B signaling cascade"
evidence=IEA] [GO:0043027 "cysteine-type endopeptidase inhibitor
activity involved in apoptotic process" evidence=IEA] [GO:0036091
"positive regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IEA] [GO:0035690
"cellular response to drug" evidence=IEA] [GO:0033210
"leptin-mediated signaling pathway" evidence=IEA] [GO:0032148
"activation of protein kinase B activity" evidence=IEA] [GO:0032095
"regulation of response to food" evidence=IEA] [GO:0030949
"positive regulation of vascular endothelial growth factor receptor
signaling pathway" evidence=IEA] [GO:0030517 "negative regulation
of axon extension" evidence=IEA] [GO:0030295 "protein kinase
activator activity" evidence=IEA] [GO:0019430 "removal of
superoxide radicals" evidence=IEA] [GO:0016570 "histone
modification" evidence=IEA] [GO:0016234 "inclusion body"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0010940 "positive regulation of necrotic cell death"
evidence=IEA] [GO:0010507 "negative regulation of autophagy"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008144 "drug binding" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0006882 "cellular zinc ion homeostasis"
evidence=IEA] [GO:0006875 "cellular metal ion homeostasis"
evidence=IEA] [GO:0006829 "zinc ion transport" evidence=IEA]
[GO:0006707 "cholesterol catabolic process" evidence=IEA]
[GO:0006112 "energy reserve metabolic process" evidence=IEA]
[GO:0005507 "copper ion binding" evidence=IEA] [GO:0000060 "protein
import into nucleus, translocation" evidence=IEA]
InterPro:IPR000006 InterPro:IPR003019 InterPro:IPR017854
Pfam:PF00131 PRINTS:PR00860 GO:GO:0048471 GO:GO:0045892
GO:GO:0050821 GO:GO:0006707 GO:GO:0008144 GO:GO:0070371
GO:GO:0010507 GO:GO:0008021 GO:GO:0071276 GO:GO:0008270
GO:GO:0070374 GO:GO:0071456 GO:GO:0043524 GO:GO:0006112
GO:GO:0030295 GO:GO:0005507 GO:GO:0016570 GO:GO:0000060
GO:GO:0071732 GO:GO:0035690 GO:GO:0032148 GO:GO:0006882
GO:GO:0060547 GO:GO:0043491 GO:GO:0030949 GO:GO:0033210
GO:GO:0036091 GO:GO:2000378 GO:GO:0043027 GO:GO:0010940
GO:GO:0006829 GO:GO:0019430 GO:GO:0044242 GO:GO:0006875
GO:GO:0016234 GO:GO:0030517 GO:GO:0014002 GO:GO:0060049
GO:GO:0051354 GO:GO:0046870 GO:GO:0032095
GeneTree:ENSGT00390000010461 Gene3D:4.10.10.10 InterPro:IPR023587
InterPro:IPR018064 PANTHER:PTHR23299 SUPFAM:SSF57868
PROSITE:PS00203 GO:GO:0055073 GO:GO:0097214 GO:GO:2000376
OMA:ETCPCPT EMBL:FP565878 Ensembl:ENSSSCT00000027420 Uniprot:I3LQ45
Length = 68
Score = 52 (23.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 14 DTCGCPVPCPGGAACSCS 31
+TC PCP G +CSC+
Sbjct: 4 ETC----PCPTGGSCSCA 17
Score = 49 (22.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 54 CTCSKIQANKIGKAHCSCGTA-C-KC 77
CTC + K+ CSC A C KC
Sbjct: 20 CTCKACRCTSCKKSCCSCCPAECEKC 45
>MGI|MGI:97173 [details] [associations]
symbol:Mt3 "metallothionein 3" species:10090 "Mus musculus"
[GO:0000060 "protein import into nucleus, translocation"
evidence=ISO] [GO:0001666 "response to hypoxia" evidence=ISO]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISO] [GO:0005507 "copper ion binding" evidence=ISO]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006112 "energy reserve metabolic process"
evidence=IMP] [GO:0006707 "cholesterol catabolic process"
evidence=IMP] [GO:0006829 "zinc ion transport" evidence=IDA]
[GO:0006875 "cellular metal ion homeostasis" evidence=IDA]
[GO:0006882 "cellular zinc ion homeostasis" evidence=IMP;IDA]
[GO:0006979 "response to oxidative stress" evidence=IMP]
[GO:0008021 "synaptic vesicle" evidence=IDA] [GO:0008144 "drug
binding" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IC;ISO;IDA] [GO:0010507 "negative regulation of autophagy"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=ISO;IMP] [GO:0010940 "positive regulation of necrotic cell
death" evidence=ISO] [GO:0010942 "positive regulation of cell
death" evidence=ISO;IMP] [GO:0014002 "astrocyte development"
evidence=IDA] [GO:0016234 "inclusion body" evidence=ISO]
[GO:0016570 "histone modification" evidence=ISO] [GO:0019430
"removal of superoxide radicals" evidence=ISO] [GO:0030295 "protein
kinase activator activity" evidence=ISO] [GO:0030308 "negative
regulation of cell growth" evidence=ISO] [GO:0030517 "negative
regulation of axon extension" evidence=ISO] [GO:0030949 "positive
regulation of vascular endothelial growth factor receptor signaling
pathway" evidence=ISO] [GO:0032095 "regulation of response to food"
evidence=IMP] [GO:0032148 "activation of protein kinase B activity"
evidence=ISO] [GO:0033210 "leptin-mediated signaling pathway"
evidence=IMP] [GO:0034599 "cellular response to oxidative stress"
evidence=IDA] [GO:0035690 "cellular response to drug" evidence=ISO]
[GO:0036091 "positive regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=ISO] [GO:0043027 "cysteine-type endopeptidase inhibitor
activity involved in apoptotic process" evidence=ISO] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;IMP]
[GO:0043085 "positive regulation of catalytic activity"
evidence=IMP] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISO]
[GO:0043491 "protein kinase B signaling cascade" evidence=ISO]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IDA] [GO:0044242 "cellular lipid catabolic process"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;IMP] [GO:0046870
"cadmium ion binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0050768 "negative regulation of neurogenesis"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0051354 "negative regulation of oxidoreductase activity"
evidence=ISO] [GO:0055069 "zinc ion homeostasis" evidence=ISO]
[GO:0055073 "cadmium ion homeostasis" evidence=ISO;IMP] [GO:0060049
"regulation of protein glycosylation" evidence=IMP] [GO:0060547
"negative regulation of necrotic cell death" evidence=ISO;IMP]
[GO:0070371 "ERK1 and ERK2 cascade" evidence=ISO] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=ISO;IMP]
[GO:0071276 "cellular response to cadmium ion" evidence=ISO]
[GO:0071732 "cellular response to nitric oxide" evidence=ISO]
[GO:0097214 "positive regulation of lysosomal membrane
permeability" evidence=IMP] [GO:2000117 "negative regulation of
cysteine-type endopeptidase activity" evidence=ISO] [GO:2000376
"positive regulation of oxygen metabolic process" evidence=IMP]
[GO:2000378 "negative regulation of reactive oxygen species
metabolic process" evidence=ISO] InterPro:IPR000006
InterPro:IPR003019 InterPro:IPR017854 Pfam:PF00131 PRINTS:PR00860
MGI:MGI:97173 GO:GO:0005634 GO:GO:0048471 GO:GO:0045892
GO:GO:0050821 GO:GO:0006707 GO:GO:0008144 GO:GO:0070371
GO:GO:0010507 GO:GO:0008021 GO:GO:0071276 GO:GO:0008270
GO:GO:0001666 GO:GO:0070374 GO:GO:0071456 GO:GO:0043524
GO:GO:0006112 GO:GO:0030295 GO:GO:0005507 GO:GO:0016570
GO:GO:0000060 GO:GO:0071732 GO:GO:0035690 GO:GO:0032148
GO:GO:0006882 GO:GO:0060547 GO:GO:0043491 GO:GO:0030949
GO:GO:0033210 GO:GO:0036091 GO:GO:2000378 GO:GO:0043027
GO:GO:0010940 GO:GO:0006829 GO:GO:0019430 GO:GO:0044242
GO:GO:0006875 GO:GO:0016234 GO:GO:0030517 GO:GO:0014002
GO:GO:0060049 GO:GO:0051354 GO:GO:0046870 GO:GO:0032095
HOGENOM:HOG000236262 Gene3D:4.10.10.10 InterPro:IPR023587
InterPro:IPR018064 PANTHER:PTHR23299 SUPFAM:SSF57868
PROSITE:PS00203 GO:GO:0055073 GO:GO:0097214 GO:GO:2000376 CTD:4504
KO:K14740 OMA:ETCPCPT EMBL:M93310 EMBL:S72046 EMBL:BC059725
IPI:IPI00117614 PIR:A46034 RefSeq:NP_038631.1 UniGene:Mm.2064
PDB:1JI9 PDBsum:1JI9 ProteinModelPortal:P28184 SMR:P28184
PhosphoSite:P28184 PRIDE:P28184 Ensembl:ENSMUST00000034211
GeneID:17751 KEGG:mmu:17751 HOVERGEN:HBG094960 InParanoid:P28184
EvolutionaryTrace:P28184 NextBio:292415 Bgee:P28184 CleanEx:MM_MT3
Genevestigator:P28184 GermOnline:ENSMUSG00000031760 Uniprot:P28184
Length = 68
Score = 52 (23.4 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 14 DTCGCPVPCPGGAACSCS 31
+TC PCP G +C+CS
Sbjct: 4 ETC----PCPTGGSCTCS 17
Score = 42 (19.8 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 54 CTCSKIQANKIGKAHCSCGTA-C-KC 77
C C + K+ CSC A C KC
Sbjct: 20 CKCKGCKCTNCKKSCCSCCPAGCEKC 45
>RGD|621252 [details] [associations]
symbol:Mt3 "metallothionein 3" species:10116 "Rattus norvegicus"
[GO:0000060 "protein import into nucleus, translocation"
evidence=ISO;ISS] [GO:0001666 "response to hypoxia"
evidence=ISO;ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISO;ISS] [GO:0005507 "copper ion binding"
evidence=ISO;ISS] [GO:0005622 "intracellular" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006112 "energy reserve metabolic process"
evidence=ISO;ISS] [GO:0006707 "cholesterol catabolic process"
evidence=ISO;ISS] [GO:0006829 "zinc ion transport"
evidence=ISO;ISS] [GO:0006875 "cellular metal ion homeostasis"
evidence=IEA;ISO] [GO:0006882 "cellular zinc ion homeostasis"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=ISO] [GO:0008021 "synaptic vesicle" evidence=ISO;ISS]
[GO:0008144 "drug binding" evidence=ISO;ISS] [GO:0008270 "zinc ion
binding" evidence=ISO;ISS] [GO:0010507 "negative regulation of
autophagy" evidence=ISO;ISS] [GO:0010628 "positive regulation of
gene expression" evidence=ISO;ISS] [GO:0010940 "positive regulation
of necrotic cell death" evidence=ISO;ISS] [GO:0010942 "positive
regulation of cell death" evidence=ISO;ISS] [GO:0014002 "astrocyte
development" evidence=ISO;ISS] [GO:0016234 "inclusion body"
evidence=ISO;ISS] [GO:0016570 "histone modification"
evidence=ISO;ISS] [GO:0019430 "removal of superoxide radicals"
evidence=ISO;ISS] [GO:0030295 "protein kinase activator activity"
evidence=ISO;ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISO;ISS;NAS] [GO:0030517 "negative regulation of axon
extension" evidence=ISO;ISS] [GO:0030949 "positive regulation of
vascular endothelial growth factor receptor signaling pathway"
evidence=ISO;ISS] [GO:0032095 "regulation of response to food"
evidence=ISO;ISS] [GO:0032148 "activation of protein kinase B
activity" evidence=ISO;ISS] [GO:0033210 "leptin-mediated signaling
pathway" evidence=ISO;ISS] [GO:0034599 "cellular response to
oxidative stress" evidence=ISO;ISS] [GO:0035690 "cellular response
to drug" evidence=ISO;ISS] [GO:0036091 "positive regulation of
transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=ISO;ISS] [GO:0043027 "cysteine-type
endopeptidase inhibitor activity involved in apoptotic process"
evidence=ISO;ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISO;ISS] [GO:0043085 "positive regulation of
catalytic activity" evidence=ISO;ISS] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO;ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISO;ISS] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=ISO;ISS]
[GO:0044242 "cellular lipid catabolic process" evidence=ISO;ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0046870
"cadmium ion binding" evidence=ISO;ISS] [GO:0046872 "metal ion
binding" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO;ISS] [GO:0050768 "negative regulation of
neurogenesis" evidence=ISO;NAS] [GO:0050774 "negative regulation of
dendrite morphogenesis" evidence=NAS] [GO:0050821 "protein
stabilization" evidence=ISO;ISS] [GO:0051354 "negative regulation
of oxidoreductase activity" evidence=ISO;ISS] [GO:0055069 "zinc ion
homeostasis" evidence=ISO;ISS] [GO:0055073 "cadmium ion
homeostasis" evidence=ISO;ISS] [GO:0060049 "regulation of protein
glycosylation" evidence=ISO;ISS] [GO:0060547 "negative regulation
of necrotic cell death" evidence=ISO;ISS] [GO:0070371 "ERK1 and
ERK2 cascade" evidence=ISO;ISS] [GO:0070374 "positive regulation of
ERK1 and ERK2 cascade" evidence=ISO;ISS] [GO:0071276 "cellular
response to cadmium ion" evidence=ISO;ISS] [GO:0071456 "cellular
response to hypoxia" evidence=IEA;ISO] [GO:0071732 "cellular
response to nitric oxide" evidence=ISO;ISS] [GO:0097214 "positive
regulation of lysosomal membrane permeability" evidence=ISO;ISS]
[GO:2000117 "negative regulation of cysteine-type endopeptidase
activity" evidence=ISO;ISS] [GO:2000376 "positive regulation of
oxygen metabolic process" evidence=ISO;ISS] [GO:2000378 "negative
regulation of reactive oxygen species metabolic process"
evidence=ISO;ISS] InterPro:IPR000006 InterPro:IPR003019
InterPro:IPR017854 Pfam:PF00131 PRINTS:PR00860 RGD:621252
GO:GO:0005634 GO:GO:0048471 GO:GO:0045892 GO:GO:0050774
GO:GO:0050821 GO:GO:0006707 GO:GO:0008144 GO:GO:0070371
GO:GO:0010507 GO:GO:0008021 GO:GO:0071276 GO:GO:0008270
GO:GO:0001666 GO:GO:0070374 GO:GO:0071456 GO:GO:0043524
GO:GO:0006112 GO:GO:0030295 GO:GO:0005507 GO:GO:0016570
GO:GO:0000060 GO:GO:0071732 GO:GO:0035690 GO:GO:0032148
GO:GO:0006882 GO:GO:0060547 GO:GO:0043491 GO:GO:0030949
GO:GO:0033210 GO:GO:0036091 GO:GO:2000378 GO:GO:0043027
GO:GO:0010940 GO:GO:0006829 GO:GO:0019430 GO:GO:0044242
GO:GO:0006875 GO:GO:0016234 GO:GO:0030517 GO:GO:0014002
GO:GO:0060049 GO:GO:0051354 GO:GO:0046870 GO:GO:0032095
eggNOG:NOG138665 GeneTree:ENSGT00390000010461 HOGENOM:HOG000236262
Gene3D:4.10.10.10 InterPro:IPR023587 InterPro:IPR018064
PANTHER:PTHR23299 SUPFAM:SSF57868 PROSITE:PS00203 GO:GO:0055073
GO:GO:0097214 GO:GO:2000376 CTD:4504 KO:K14740 OMA:ETCPCPT
EMBL:S65838 EMBL:X89603 EMBL:Y08235 EMBL:BC058453 IPI:IPI00205463
PIR:S58086 RefSeq:NP_446420.1 UniGene:Rn.11325
ProteinModelPortal:P37361 SMR:P37361 IntAct:P37361 STRING:P37361
PhosphoSite:P37361 PRIDE:P37361 Ensembl:ENSRNOT00000025669
GeneID:117038 KEGG:rno:117038 UCSC:RGD:621252 InParanoid:P37361
NextBio:619839 Genevestigator:P37361 GermOnline:ENSRNOG00000018958
Uniprot:P37361
Length = 66
Score = 52 (23.4 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 14 DTCGCPVPCPGGAACSCS 31
+TC PCP G +C+CS
Sbjct: 4 ETC----PCPTGGSCTCS 17
Score = 42 (19.8 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 54 CTCSKIQANKIGKAHCSCGTA-C-KC 77
C C + K+ CSC A C KC
Sbjct: 20 CKCKGCKCTNCKKSCCSCCPAGCEKC 45
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.133 0.488 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 79 65 0.00091 102 3 12 22 0.42 28
29 0.46 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 400 (43 KB)
Total size of DFA: 73 KB (2063 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 6.16u 0.15s 6.31t Elapsed: 00:00:01
Total cpu time: 6.16u 0.15s 6.31t Elapsed: 00:00:01
Start: Fri May 10 10:13:31 2013 End: Fri May 10 10:13:32 2013