BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 041376
         (79 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q42377|EC2_ARATH EC protein homolog 2 OS=Arabidopsis thaliana GN=At2g23240 PE=2
          SV=2
          Length = 85

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 1  MADVLR-SGIVHCNDTCGCPVPCPGGAACSCSTVAYS---EYYHKCCSCGGHCSCNPCTC 56
          MAD  + S    CND CGCP PCPGG +C C  ++ +   +  H  C CG HC CNPC C
Sbjct: 1  MADTGKGSASASCNDRCGCPSPCPGGESCRCKMMSEASGGDQEHNTCPCGEHCGCNPCNC 60

Query: 57 SKIQANKIGKAHCSCGTACKCPT 79
           K Q     K  C+CG  C C T
Sbjct: 61 PKTQTQTSAKG-CTCGEGCTCAT 82


>sp|P93746|EC1_ARATH EC protein homolog 1 OS=Arabidopsis thaliana GN=At2g42000 PE=2
          SV=2
          Length = 84

 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 1  MADVLR-SGIVHCNDTCGCPVPCPGGAACSCSTVAYS--EYYHKCCSCGGHCSCNPCTCS 57
          MAD  + S +  CND+CGCP PCPGG +C C     S  +  H  C CG HC CNPC C 
Sbjct: 1  MADTGKGSSVAGCNDSCGCPSPCPGGNSCRCRMREASAGDQGHMVCPCGEHCGCNPCNCP 60

Query: 58 KIQANKIGKAHCSCGTACKC 77
          K Q     K  C+CG  C C
Sbjct: 61 KTQTQTSAKG-CTCGEGCTC 79


>sp|P43401|EC_MAIZE EC protein homolog OS=Zea mays PE=3 SV=2
          Length = 77

 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 10 VHCNDTCGCPVPCPGGAACSCSTVAYSEYYHKCCSCGGHCSCNPCTCSKI---QANKIGK 66
          + C+D CGC VPCPGG  C C++ +  +  H  C CG HC C+PCTC +       +  +
Sbjct: 1  MGCDDKCGCAVPCPGGKDCRCTSGSGGQREHTTCGCGEHCECSPCTCGRATMPSGRENRR 60

Query: 67 AHCSCGTACKCPT 79
          A+CSCG +C C +
Sbjct: 61 ANCSCGASCNCAS 73


>sp|P30570|EC3_WHEAT EC protein III OS=Triticum aestivum PE=2 SV=2
          Length = 81

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 9/77 (11%)

Query: 10 VHCNDTCGCPVPCPGGAACSCSTVAYSEY--YHKCCSCGGHCSCNPCTCSKI-----QAN 62
          + CND CGC VPCPGG  C C++         H  C CG HC CNPC C +      +AN
Sbjct: 1  MGCNDKCGCAVPCPGGTGCRCTSARSDAAAGEHTTCGCGEHCGCNPCACGREGTPSGRAN 60

Query: 63 KIGKAHCSCGTACKCPT 79
          +  +A+CSCG AC C +
Sbjct: 61 R--RANCSCGAACNCAS 75


>sp|Q109B0|MT21A_ORYSJ Class II metallothionein-like protein 1A OS=Oryza sativa subsp.
          japonica GN=MT21A PE=2 SV=1
          Length = 87

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 4/74 (5%)

Query: 10 VHCNDTCGCPVPCPGGAACSCSTVAYS-EYYHKCCSCGGHCSCNPCTC---SKIQANKIG 65
          + C+D CGC VPCPGG  C C++ A S    H  CSCG HC CNPC C   S+    +  
Sbjct: 1  MGCDDKCGCAVPCPGGTGCRCASSARSGGGDHTTCSCGDHCGCNPCRCGRESQPTGRENR 60

Query: 66 KAHCSCGTACKCPT 79
          +A CSCG +C C +
Sbjct: 61 RAGCSCGDSCTCAS 74


>sp|P30569|EC1_WHEAT EC protein I/II OS=Triticum aestivum PE=1 SV=2
          Length = 81

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 9/77 (11%)

Query: 10 VHCNDTCGCPVPCPGGAACSCSTV--AYSEYYHKCCSCGGHCSCNPCTCSKI-----QAN 62
          + C+D CGC VPCPGG  C C++     +   H  C CG HC CNPC C +      +AN
Sbjct: 1  MGCDDKCGCAVPCPGGTGCRCTSARSGAAAGEHTTCGCGEHCGCNPCACGREGTPSGRAN 60

Query: 63 KIGKAHCSCGTACKCPT 79
          +  +A+CSCG AC C +
Sbjct: 61 R--RANCSCGAACNCAS 75


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.325    0.136    0.526 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,141,525
Number of Sequences: 539616
Number of extensions: 1159181
Number of successful extensions: 6365
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 285
Number of HSP's that attempted gapping in prelim test: 4598
Number of HSP's gapped (non-prelim): 1503
length of query: 79
length of database: 191,569,459
effective HSP length: 50
effective length of query: 29
effective length of database: 164,588,659
effective search space: 4773071111
effective search space used: 4773071111
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)