Query 041376
Match_columns 79
No_of_seqs 25 out of 27
Neff 2.6
Searched_HMMs 13730
Date Mon Mar 25 10:42:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041376.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/041376hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1t2ya_ g.46.1.1 (A:) Metallot 56.8 2 0.00014 21.6 1.0 13 66-78 8-20 (26)
2 d1qjla_ g.46.1.1 (A:) Metallot 39.4 8.5 0.00062 19.3 1.8 21 13-33 4-24 (28)
3 d1m0ja_ g.46.1.1 (A:) Metallot 39.0 6.3 0.00046 19.9 1.3 17 41-57 9-25 (28)
4 d1jjda_ g.46.1.1 (A:) Cyanobac 37.6 7.3 0.00054 22.1 1.6 23 48-70 4-29 (52)
5 d2erwa1 g.68.1.1 (A:4-56) Bloo 28.3 8.5 0.00062 20.4 0.7 8 52-59 1-8 (53)
6 d1e0fi_ g.3.15.2 (I:) Haemadin 16.8 28 0.002 19.6 1.4 8 19-26 7-14 (57)
7 d1agga_ g.3.6.2 (A:) omega-Aga 16.2 30 0.0022 19.0 1.4 14 20-33 17-30 (48)
8 d1l3ya_ g.3.11.6 (A:) Integrin 12.7 16 0.0012 19.1 -0.5 15 38-53 18-32 (41)
9 d1ypqa1 d.169.1.1 (A:140-270) 9.8 49 0.0036 17.7 1.0 8 18-25 1-8 (131)
10 d1kloa1 g.3.11.2 (A:11-65) Lam 8.6 1.4E+02 0.0099 15.3 2.6 19 21-43 2-20 (55)
No 1
>d1t2ya_ g.46.1.1 (A:) Metallothionein {Neurospora crassa [TaxId: 5141]}
Probab=56.80 E-value=2 Score=21.57 Aligned_cols=13 Identities=38% Similarity=1.446 Sum_probs=10.0
Q ss_pred ccccccCCCcccC
Q 041376 66 KAHCSCGTACKCP 78 (79)
Q Consensus 66 ka~C~CG~~C~C~ 78 (79)
...|.||++|+|.
T Consensus 8 asscncgsgcscs 20 (26)
T d1t2ya_ 8 ASSCNCGSGCSCS 20 (26)
T ss_dssp TTTCCCSSSCCSS
T ss_pred cccccCCCCcccc
Confidence 3568899998874
No 2
>d1qjla_ g.46.1.1 (A:) Metallothionein {Purple sea urchin (Strongylocentrotus purpuratus) [TaxId: 7668]}
Probab=39.38 E-value=8.5 Score=19.33 Aligned_cols=21 Identities=38% Similarity=0.998 Sum_probs=13.8
Q ss_pred CCCCCCCcCCCCCCcceeeec
Q 041376 13 NDTCGCPVPCPGGAACSCSTV 33 (79)
Q Consensus 13 ~d~CGC~vPCpgG~~CrC~~~ 33 (79)
|..|-|+.-|-.|+.|.|+.+
T Consensus 4 naackcangckcgsgcscteg 24 (28)
T d1qjla_ 4 NAACKCANGCKCGSGCSCTEG 24 (28)
T ss_dssp CTTCCCCTTCCTTSCCCCBTT
T ss_pred ccccccccCcccCCCccccCC
Confidence 345667777777777777653
No 3
>d1m0ja_ g.46.1.1 (A:) Metallothionein {Black rockcod (Notothenia coriiceps) [TaxId: 8208]}
Probab=39.00 E-value=6.3 Score=19.85 Aligned_cols=17 Identities=47% Similarity=1.644 Sum_probs=14.0
Q ss_pred eeecCCCCccccCCccC
Q 041376 41 KCCSCGGHCSCNPCTCS 57 (79)
Q Consensus 41 ~~C~CGEHCgCNPCtC~ 57 (79)
-+|.||..|-|.-|+|-
T Consensus 9 gtcncggsctctncsck 25 (28)
T d1m0ja_ 9 GTCNCGGSCTCTNCSCK 25 (28)
T ss_dssp SSCCCSSSCCSSSCCCT
T ss_pred cccccCCceeecCcccc
Confidence 47899999998888874
No 4
>d1jjda_ g.46.1.1 (A:) Cyanobacterial metallothionein SmtA {Synechococcus sp., PCC 7942 [TaxId: 1131]}
Probab=37.64 E-value=7.3 Score=22.08 Aligned_cols=23 Identities=35% Similarity=0.944 Sum_probs=17.3
Q ss_pred CccccCCccCCce---eccCCccccc
Q 041376 48 HCSCNPCTCSKIQ---ANKIGKAHCS 70 (79)
Q Consensus 48 HCgCNPCtC~k~~---~~g~gka~C~ 70 (79)
.|-|.||.|--.. ....||+||+
T Consensus 4 kCAC~~C~C~Vs~~~Ai~kdGk~YCs 29 (52)
T d1jjda_ 4 KCACEPCLCNVDPSKAIDRNGLYYCS 29 (52)
T ss_dssp CCSSTTCCCCBCTTTSEESSSCEESS
T ss_pred eecCCCcEEEecHHHHHhhcCceeec
Confidence 4788999997664 4456789986
No 5
>d2erwa1 g.68.1.1 (A:4-56) Blood-sucking insect-derived tryptase inhibitor {Triatoma infestans [TaxId: 30076]}
Probab=28.32 E-value=8.5 Score=20.38 Aligned_cols=8 Identities=50% Similarity=1.335 Sum_probs=7.1
Q ss_pred cCCccCCc
Q 041376 52 NPCTCSKI 59 (79)
Q Consensus 52 NPCtC~k~ 59 (79)
|||.|+++
T Consensus 1 ~PC~C~~~ 8 (53)
T d2erwa1 1 NPCACFRN 8 (53)
T ss_dssp CTTCCCCC
T ss_pred CCCcCCCC
Confidence 79999987
No 6
>d1e0fi_ g.3.15.2 (I:) Haemadin {Indian leech (Haemadipsa sylvestris) [TaxId: 13555]}
Probab=16.76 E-value=28 Score=19.63 Aligned_cols=8 Identities=63% Similarity=1.506 Sum_probs=5.5
Q ss_pred CcCCCCCC
Q 041376 19 PVPCPGGA 26 (79)
Q Consensus 19 ~vPCpgG~ 26 (79)
-||||.|.
T Consensus 7 kvpcpdge 14 (57)
T d1e0fi_ 7 KVPCPDGE 14 (57)
T ss_dssp SSBCCSSS
T ss_pred cccCCCCc
Confidence 37888764
No 7
>d1agga_ g.3.6.2 (A:) omega-Agatoxin IV, IVa, IVb {Funnel web spider (Agelenopsis aperta) [TaxId: 6908]}
Probab=16.25 E-value=30 Score=18.97 Aligned_cols=14 Identities=36% Similarity=0.966 Sum_probs=10.4
Q ss_pred cCCCCCCcceeeec
Q 041376 20 VPCPGGAACSCSTV 33 (79)
Q Consensus 20 vPCpgG~~CrC~~~ 33 (79)
.||--|..|||+.-
T Consensus 17 t~ccrgr~c~cs~~ 30 (48)
T d1agga_ 17 TKCCRGRPCRCSMI 30 (48)
T ss_dssp CCBTTTBCEEECSS
T ss_pred ccccCCCCcEEEEe
Confidence 57777888888774
No 8
>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.65 E-value=16 Score=19.10 Aligned_cols=15 Identities=40% Similarity=1.070 Sum_probs=9.4
Q ss_pred ccceeecCCCCccccC
Q 041376 38 YYHKCCSCGGHCSCNP 53 (79)
Q Consensus 38 ~~H~~C~CGEHCgCNP 53 (79)
.+|-+|.+|+ |.|+|
T Consensus 18 ~~hG~C~~G~-C~C~~ 32 (41)
T d1l3ya_ 18 PGRGLCFCGK-CRCHP 32 (41)
T ss_dssp HHHEEEETTE-EEECT
T ss_pred CCCCeEECCE-EEcCC
Confidence 4577777764 55554
No 9
>d1ypqa1 d.169.1.1 (A:140-270) Oxidised low density lipoprotein {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.81 E-value=49 Score=17.70 Aligned_cols=8 Identities=50% Similarity=1.572 Sum_probs=4.5
Q ss_pred CCcCCCCC
Q 041376 18 CPVPCPGG 25 (79)
Q Consensus 18 C~vPCpgG 25 (79)
|..|||-|
T Consensus 1 c~~~Cp~g 8 (131)
T d1ypqa1 1 CSAPCPQD 8 (131)
T ss_dssp CCCSSCTT
T ss_pred CcCCCCCC
Confidence 45566655
No 10
>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=8.62 E-value=1.4e+02 Score=15.33 Aligned_cols=19 Identities=37% Similarity=1.003 Sum_probs=10.8
Q ss_pred CCCCCCcceeeecccCcccceee
Q 041376 21 PCPGGAACSCSTVAYSEYYHKCC 43 (79)
Q Consensus 21 PCpgG~~CrC~~~~~~~~~H~~C 43 (79)
|||++.+|..... .++..|
T Consensus 2 pC~~~~~c~~~~~----~~~~vC 20 (55)
T d1kloa1 2 PCPGGSSCAIVPK----TKEVVC 20 (55)
T ss_dssp CSCTTCCEEECSS----SCCEEE
T ss_pred cCcCCCccceeCC----CCCEEc
Confidence 6778776654332 345555
Done!