Query 041378
Match_columns 145
No_of_seqs 105 out of 1082
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 10:43:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041378.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041378hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eld_A MJ16.5-P1, small heat s 99.9 1.9E-25 6.4E-30 160.0 11.7 95 46-143 56-161 (161)
2 1gme_A Heat shock protein 16.9 99.9 2.8E-24 9.5E-29 152.4 12.8 101 42-143 39-150 (151)
3 3gla_A Low molecular weight he 99.9 5.7E-24 2E-28 140.9 12.3 87 44-130 2-98 (100)
4 3aab_A Putative uncharacterize 99.9 5.9E-25 2E-29 150.9 7.5 86 44-130 22-116 (123)
5 4fei_A Heat shock protein-rela 99.9 1.8E-23 6.1E-28 139.2 9.1 89 43-131 3-96 (102)
6 3l1e_A Alpha-crystallin A chai 99.9 8.2E-22 2.8E-26 132.0 11.4 92 47-143 3-105 (106)
7 2wj5_A Heat shock protein beta 99.8 5E-21 1.7E-25 127.1 8.8 88 48-143 3-99 (101)
8 2bol_A TSP36, small heat shock 99.8 3.9E-20 1.3E-24 144.6 12.0 83 44-131 96-190 (314)
9 2klr_A Alpha-crystallin B chai 99.8 2.1E-20 7.3E-25 135.3 8.1 90 48-144 65-163 (175)
10 3q9p_A Heat shock protein beta 99.8 4E-19 1.4E-23 114.4 10.3 74 51-129 2-84 (85)
11 2y1y_A Alpha-crystallin B chai 99.8 1.7E-18 5.7E-23 112.6 8.9 73 53-130 3-84 (90)
12 2bol_A TSP36, small heat shock 99.7 1.1E-16 3.8E-21 125.1 7.4 82 47-129 221-313 (314)
13 1rl1_A Suppressor of G2 allele 99.0 5.5E-09 1.9E-13 69.9 9.8 80 45-130 8-88 (114)
14 2xcm_C SGT1-like protein, cyto 98.9 7.1E-09 2.4E-13 66.6 8.3 79 46-130 2-81 (92)
15 2k8q_A Protein SHQ1; beta-sand 98.4 1.2E-06 4.1E-11 60.2 8.2 78 44-131 1-83 (134)
16 3eud_A Protein SHQ1; CS domain 98.2 2.3E-05 8E-10 52.1 10.4 80 42-131 13-97 (115)
17 3igf_A ALL4481 protein; two-do 98.0 1.6E-05 5.4E-10 63.4 8.2 68 48-127 299-367 (374)
18 1x5m_A Calcyclin-binding prote 97.7 0.00068 2.3E-08 45.8 11.0 81 45-130 19-103 (127)
19 1wh0_A Ubiquitin carboxyl-term 97.6 0.00082 2.8E-08 46.0 9.6 81 45-130 18-111 (134)
20 1wgv_A KIAA1068 protein; CS do 97.6 0.0019 6.5E-08 43.4 11.3 84 42-130 15-101 (124)
21 3qor_A Nuclear migration prote 97.4 0.0029 1E-07 42.3 11.0 81 42-130 12-96 (121)
22 2o30_A Nuclear movement protei 97.2 0.0029 1E-07 42.9 8.8 75 46-129 4-79 (131)
23 1wfi_A Nuclear distribution ge 97.2 0.0022 7.6E-08 43.4 8.0 80 43-130 4-87 (131)
24 1ejf_A Progesterone receptor P 97.2 0.0034 1.2E-07 42.2 8.7 76 48-130 5-81 (125)
25 2rh0_A NUDC domain-containing 97.0 0.012 4E-07 41.2 10.8 78 44-130 11-90 (157)
26 2kmw_A Uncharacterized protein 96.8 0.0045 1.5E-07 43.1 7.1 78 45-130 3-81 (150)
27 2cg9_X CO-chaperone protein SB 96.8 0.00093 3.2E-08 45.7 3.2 79 45-130 5-97 (134)
28 3q9p_A Heat shock protein beta 87.2 1.4 4.9E-05 27.0 5.2 34 96-130 7-40 (85)
29 3gla_A Low molecular weight he 86.5 2.3 7.8E-05 26.6 6.0 35 95-130 13-47 (100)
30 4eld_A MJ16.5-P1, small heat s 85.8 4.1 0.00014 27.9 7.5 34 96-130 66-99 (161)
31 2y1y_A Alpha-crystallin B chai 84.8 1.9 6.6E-05 26.6 4.9 33 96-129 6-38 (90)
32 2wj5_A Heat shock protein beta 82.7 2.6 8.8E-05 26.7 4.9 34 96-130 11-44 (101)
33 3l1e_A Alpha-crystallin A chai 82.2 2.7 9.3E-05 26.8 4.9 34 95-129 11-44 (106)
34 4fei_A Heat shock protein-rela 81.9 3.2 0.00011 26.2 5.2 33 95-128 15-47 (102)
35 3aab_A Putative uncharacterize 78.7 5.5 0.00019 25.9 5.7 34 96-130 34-68 (123)
36 1gme_A Heat shock protein 16.9 76.8 11 0.00037 25.6 6.9 34 96-130 53-87 (151)
37 2nwt_A UPF0165 protein AF_2212 70.4 5.3 0.00018 23.8 3.4 30 111-144 3-32 (69)
38 2klr_A Alpha-crystallin B chai 68.4 8.1 0.00028 27.0 4.7 33 96-129 73-105 (175)
39 3elx_A Ileal bIle acid-binding 51.0 52 0.0018 21.9 7.5 97 23-127 18-117 (138)
40 2o30_A Nuclear movement protei 50.3 49 0.0017 21.6 5.9 33 95-127 13-45 (131)
41 1ew4_A CYAY protein; friedreic 45.9 11 0.00039 24.1 2.1 17 112-128 29-45 (106)
42 3oeq_A Frataxin homolog, mitoc 43.3 18 0.00063 23.9 2.8 16 113-128 49-64 (123)
43 2rh0_A NUDC domain-containing 42.7 76 0.0026 21.5 6.2 33 95-127 22-54 (157)
44 1wgv_A KIAA1068 protein; CS do 37.6 80 0.0027 20.2 5.7 33 95-127 28-61 (124)
45 1nvp_C Transcription initiatio 35.9 16 0.00056 22.1 1.5 16 110-125 46-61 (76)
46 3qor_A Nuclear migration prote 34.3 91 0.0031 19.9 5.7 35 94-128 24-60 (121)
47 1q5l_A Chaperone protein DNAK; 32.6 97 0.0033 20.2 5.2 29 112-143 99-130 (135)
48 3t3l_A Frataxin, mitochondrial 32.6 29 0.00099 23.1 2.4 17 111-127 40-56 (129)
49 3d33_A Domain of unknown funct 31.3 63 0.0022 20.7 3.9 25 99-128 22-46 (108)
50 1nh2_C Transcription initiatio 29.6 24 0.00081 21.5 1.5 16 110-125 48-63 (79)
51 4i95_A Putative uncharacterize 28.0 1.4E+02 0.0048 20.1 5.7 75 43-126 30-108 (142)
52 1wfi_A Nuclear distribution ge 25.9 1.4E+02 0.0046 19.2 5.5 33 95-127 16-50 (131)
53 3dob_A Heat shock 70 kDa prote 24.2 1.6E+02 0.0056 19.6 5.2 30 111-143 81-113 (152)
54 3h0x_A 78 kDa glucose-regulate 23.7 1.7E+02 0.0057 19.5 5.2 30 111-143 81-113 (152)
55 3dqg_A Heat shock 70 kDa prote 23.5 1.7E+02 0.0058 19.5 5.8 30 111-143 81-113 (151)
56 2fsd_A RBP, putative baseplate 22.7 1.4E+02 0.0047 19.4 4.2 36 107-142 44-80 (142)
57 4gzv_A Hypothetical protein; A 21.3 1.9E+02 0.0067 19.4 5.9 74 44-126 33-108 (142)
58 2op6_A Heat shock 70 kDa prote 20.9 1.7E+02 0.0057 19.3 4.7 30 111-143 81-113 (152)
59 4e81_A Chaperone protein DNAK; 20.6 1.9E+02 0.0067 20.5 5.3 30 111-143 82-114 (219)
60 1eal_A Gastrotropin, ileal lip 20.4 1.2E+02 0.004 19.7 3.7 98 23-128 14-114 (127)
61 1s21_A ORF2; predominantly bet 20.0 44 0.0015 24.0 1.6 25 112-144 176-204 (206)
No 1
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.93 E-value=1.9e-25 Score=159.96 Aligned_cols=95 Identities=24% Similarity=0.303 Sum_probs=79.9
Q ss_pred CCcceEEEcCCeEEEEEECCCCCCcceeEEe----------cccccccCcceEEEEee-ecceEEEEEECCCCCccCCce
Q 041378 46 RTPADIYEDPSHYSFILDMPGLEASNIKKKK----------GQSAENEGAVKAIRIER-RRARNMRKFTLPQDSNLEEVK 114 (145)
Q Consensus 46 ~p~~~v~e~~~~~~i~~~lpG~~~e~i~V~~----------~~~~~~~~~~~~~~~e~-~~~~f~r~i~LP~~vd~~~i~ 114 (145)
.+++||++++++|+|.++|||+++++|+|.. +......+...++++|+ .+++|.|+|.||.+||.++|+
T Consensus 56 ~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~ 135 (161)
T 4eld_A 56 FMPISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENAS 135 (161)
T ss_dssp CCCEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCE
T ss_pred ccceeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEE
Confidence 3449999999999999999999999999921 11111235567889999 999999999999999999999
Q ss_pred EEEeCCEEEEEEeCcCCCCCCCCeeEEec
Q 041378 115 AIYKDGVLTVTVAKKVPEVSRRPKTVTIP 143 (145)
Q Consensus 115 A~~~~GvL~I~~pK~~~~~~~~~~~I~I~ 143 (145)
|+|+||+|+|++||.+ .+++++|+|+
T Consensus 136 A~~~nGvL~I~lpK~~---~~~~r~I~Ie 161 (161)
T 4eld_A 136 AKFENGVLSVILPKAE---SSIKKGINIE 161 (161)
T ss_dssp EEEETTEEEEEEEBCG---GGSCCCCCCC
T ss_pred EEEECCEEEEEEEcCC---CCCCcEeecC
Confidence 9999999999999954 4467889885
No 2
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.92 E-value=2.8e-24 Score=152.44 Aligned_cols=101 Identities=32% Similarity=0.432 Sum_probs=83.2
Q ss_pred ccccCCcceEEEcCCeEEEEEECCCCCCcceeEEe-cc----------cccccCcceEEEEeeecceEEEEEECCCCCcc
Q 041378 42 RAILRTPADIYEDPSHYSFILDMPGLEASNIKKKK-GQ----------SAENEGAVKAIRIERRRARNMRKFTLPQDSNL 110 (145)
Q Consensus 42 ~~~~~p~~~v~e~~~~~~i~~~lpG~~~e~i~V~~-~~----------~~~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~ 110 (145)
...+.|+++|++++++|+|.++|||+++++|+|.. .+ .....++..++++|+.+++|.|+|.||..||.
T Consensus 39 ~~~~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~ 118 (151)
T 1gme_A 39 AAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKV 118 (151)
T ss_dssp HHHGGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCG
T ss_pred ccccCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccc
Confidence 45688999999999999999999999999999944 21 11123456888899999999999999999999
Q ss_pred CCceEEEeCCEEEEEEeCcCCCCCCCCeeEEec
Q 041378 111 EEVKAIYKDGVLTVTVAKKVPEVSRRPKTVTIP 143 (145)
Q Consensus 111 ~~i~A~~~~GvL~I~~pK~~~~~~~~~~~I~I~ 143 (145)
++|+|+|+||+|+|++||..+ ...+.++|+|+
T Consensus 119 ~~i~A~~~nGvL~I~lPK~~~-~~~~~~~I~I~ 150 (151)
T 1gme_A 119 EEVKAGLENGVLTVTVPKAEV-KKPEVKAIQIS 150 (151)
T ss_dssp GGCEEEEETTEEEEEEECCCC-CTTCCCCCCCC
T ss_pred cceEEEEECCEEEEEEEccCc-CCCCCeEeeeC
Confidence 999999999999999999763 22344666664
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.91 E-value=5.7e-24 Score=140.91 Aligned_cols=87 Identities=28% Similarity=0.495 Sum_probs=75.4
Q ss_pred ccCCcceEEEcCCeEEEEEECCCCCCcceeEEe----------cccccccCcceEEEEeeecceEEEEEECCCCCccCCc
Q 041378 44 ILRTPADIYEDPSHYSFILDMPGLEASNIKKKK----------GQSAENEGAVKAIRIERRRARNMRKFTLPQDSNLEEV 113 (145)
Q Consensus 44 ~~~p~~~v~e~~~~~~i~~~lpG~~~e~i~V~~----------~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~i 113 (145)
.|.|++||++++++|+|.++|||+++++|+|.. +......+...++++|+.+++|.|+|.||..||.+++
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i 81 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGI 81 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSC
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHe
Confidence 588999999999999999999999999999921 1111134556889999999999999999999999999
Q ss_pred eEEEeCCEEEEEEeCcC
Q 041378 114 KAIYKDGVLTVTVAKKV 130 (145)
Q Consensus 114 ~A~~~~GvL~I~~pK~~ 130 (145)
+|+|+||+|+|++||.+
T Consensus 82 ~A~~~~GvL~I~~pK~~ 98 (100)
T 3gla_A 82 TAAGRNGVLEIRIPKRP 98 (100)
T ss_dssp EEEEETTEEEEEEEBC-
T ss_pred EEEEeCCEEEEEEecCC
Confidence 99999999999999954
No 4
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.91 E-value=5.9e-25 Score=150.92 Aligned_cols=86 Identities=20% Similarity=0.337 Sum_probs=73.8
Q ss_pred ccCCcceEEEcCCeEEEEEECCCCCCcceeEEecc-c-------ccccCcceEEEEeeecceEEEEEECCCCCccCCc-e
Q 041378 44 ILRTPADIYEDPSHYSFILDMPGLEASNIKKKKGQ-S-------AENEGAVKAIRIERRRARNMRKFTLPQDSNLEEV-K 114 (145)
Q Consensus 44 ~~~p~~~v~e~~~~~~i~~~lpG~~~e~i~V~~~~-~-------~~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~i-~ 114 (145)
.+.|+++|++++++|+|.++|||+++++|+|...+ . .....+..++++|+.+ +|.|+|.||.+||.+++ +
T Consensus 22 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~-~f~R~~~LP~~vd~~~i~~ 100 (123)
T 3aab_A 22 LVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPK-YVRKVIRLPYNVAKDAEIS 100 (123)
T ss_dssp HHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCS-EEEEEEECSSEECTTCCCE
T ss_pred cCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeE-EEEEEEECCCCcCcchhCe
Confidence 35689999999999999999999999999994433 2 1111146788899999 99999999999999999 9
Q ss_pred EEEeCCEEEEEEeCcC
Q 041378 115 AIYKDGVLTVTVAKKV 130 (145)
Q Consensus 115 A~~~~GvL~I~~pK~~ 130 (145)
|+|+||+|+|++||..
T Consensus 101 A~~~~GvL~I~lPK~~ 116 (123)
T 3aab_A 101 GKYENGVLTIRIPIAG 116 (123)
T ss_dssp EEEETTEEEEEEEGGG
T ss_pred eEEcCCEEEEEEEcCC
Confidence 9999999999999954
No 5
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.90 E-value=1.8e-23 Score=139.20 Aligned_cols=89 Identities=27% Similarity=0.413 Sum_probs=75.2
Q ss_pred cccCCcceEEEcCCeEEEEEECCCCCCcceeEEecccc-----cccCcceEEEEeeecceEEEEEECCCCCccCCceEEE
Q 041378 43 AILRTPADIYEDPSHYSFILDMPGLEASNIKKKKGQSA-----ENEGAVKAIRIERRRARNMRKFTLPQDSNLEEVKAIY 117 (145)
Q Consensus 43 ~~~~p~~~v~e~~~~~~i~~~lpG~~~e~i~V~~~~~~-----~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~i~A~~ 117 (145)
+.|.|+++|++++++|+|.++|||+++++|+|...+.. .......++++|+.+++|.|+|.||..||.+.++|+|
T Consensus 3 g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~ 82 (102)
T 4fei_A 3 GPWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASL 82 (102)
T ss_dssp EECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEE
T ss_pred CcccCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEE
Confidence 57889999999999999999999999999999332210 0112356677788899999999999999999999999
Q ss_pred eCCEEEEEEeCcCC
Q 041378 118 KDGVLTVTVAKKVP 131 (145)
Q Consensus 118 ~~GvL~I~~pK~~~ 131 (145)
+||+|+|++||.++
T Consensus 83 ~~GvL~I~lpK~~~ 96 (102)
T 4fei_A 83 AGGVLTVRFEKLRP 96 (102)
T ss_dssp ETTEEEEEEEBSSC
T ss_pred ECCEEEEEEEccCc
Confidence 99999999999653
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.87 E-value=8.2e-22 Score=132.03 Aligned_cols=92 Identities=16% Similarity=0.310 Sum_probs=72.1
Q ss_pred CcceEEEcCCeEEEEEECCCCCCcceeEEeccc-------c-cccCcceEEEEeeecceEEEEEECCCCCccCCceEEE-
Q 041378 47 TPADIYEDPSHYSFILDMPGLEASNIKKKKGQS-------A-ENEGAVKAIRIERRRARNMRKFTLPQDSNLEEVKAIY- 117 (145)
Q Consensus 47 p~~~v~e~~~~~~i~~~lpG~~~e~i~V~~~~~-------~-~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~i~A~~- 117 (145)
...+|++++++|+|.++||||++++|+|...+. . ...+...+++ +.|.|+|.||.+||.++++|+|
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~-----~eF~R~~~LP~~vd~~~i~A~~s 77 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYIS-----REFHRRYRLPSNVDQSALSCSLS 77 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEE-----EEEEEEEECCTTBCTTSCEEEEC
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEE-----EEEEEEEECCCCcChhHcEEEEC
Confidence 467999999999999999999999999932211 0 0112233443 3499999999999999999999
Q ss_pred eCCEEEEEEeCcCCCC--CCCCeeEEec
Q 041378 118 KDGVLTVTVAKKVPEV--SRRPKTVTIP 143 (145)
Q Consensus 118 ~~GvL~I~~pK~~~~~--~~~~~~I~I~ 143 (145)
+||+|+|++||..+.. ..++++|+|+
T Consensus 78 ~~GvL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 78 ADGMLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp TTSEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred CCCEEEEEEEccCcccccCCCCeEeeec
Confidence 8999999999987532 2478889886
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.84 E-value=5e-21 Score=127.15 Aligned_cols=88 Identities=19% Similarity=0.273 Sum_probs=66.7
Q ss_pred cceEEEcCCeEEEEEECCCCCCcceeEEeccc--------ccccCcceEEEEeeecceEEEEEECCCCCccCCceEEE-e
Q 041378 48 PADIYEDPSHYSFILDMPGLEASNIKKKKGQS--------AENEGAVKAIRIERRRARNMRKFTLPQDSNLEEVKAIY-K 118 (145)
Q Consensus 48 ~~~v~e~~~~~~i~~~lpG~~~e~i~V~~~~~--------~~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~i~A~~-~ 118 (145)
.+||++++++|.|.++||||++++|+|...+. ....++..++++ .|.|+|.||.+||.++++|+| +
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~-----eF~R~~~LP~~vd~~~i~A~~s~ 77 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAR-----EFHRRYRLPPGVDPAAVTSALSP 77 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEE-----EEEEEEECCTTBCTTCCEEEECT
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEE-----EEEEEEECCCCcChhHCEEEECC
Confidence 57899999999999999999999999932111 011223344433 399999999999999999999 7
Q ss_pred CCEEEEEEeCcCCCCCCCCeeEEec
Q 041378 119 DGVLTVTVAKKVPEVSRRPKTVTIP 143 (145)
Q Consensus 119 ~GvL~I~~pK~~~~~~~~~~~I~I~ 143 (145)
||+|+|++||.. +++++.++|.
T Consensus 78 nGvL~I~lPK~~---~~~~~~~~i~ 99 (101)
T 2wj5_A 78 EGVLSIQATPAS---AQASLPSPPA 99 (101)
T ss_dssp TSEEEEEECBCC---CCCSSCC---
T ss_pred CCEEEEEEECCC---cCCCCCCccc
Confidence 999999999954 4456666654
No 8
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.83 E-value=3.9e-20 Score=144.63 Aligned_cols=83 Identities=19% Similarity=0.265 Sum_probs=67.8
Q ss_pred ccCCcceEEEcCC----eEEEEEECCCCCCcceeEEecc-------cccccCcceEEEEeeecceEEEEEECCCCCccCC
Q 041378 44 ILRTPADIYEDPS----HYSFILDMPGLEASNIKKKKGQ-------SAENEGAVKAIRIERRRARNMRKFTLPQDSNLEE 112 (145)
Q Consensus 44 ~~~p~~~v~e~~~----~~~i~~~lpG~~~e~i~V~~~~-------~~~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~ 112 (145)
.+.|++||+++++ +|+|.++||||++++|+|...+ ......+. .+.+++|.|+|.||++||.++
T Consensus 96 ~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~-----~r~~g~F~R~~~LP~~Vd~e~ 170 (314)
T 2bol_A 96 ELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGD-----AAMSESVGRSIPLPPSVDRNH 170 (314)
T ss_dssp TTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTC-----CCBCCCEEEEEECCTTBCGGG
T ss_pred cCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCC-----CEEEEEEEEEEECCCCccccc
Confidence 4779999999999 9999999999999999993211 11111111 256799999999999999999
Q ss_pred ceEEEe-CCEEEEEEeCcCC
Q 041378 113 VKAIYK-DGVLTVTVAKKVP 131 (145)
Q Consensus 113 i~A~~~-~GvL~I~~pK~~~ 131 (145)
|+|+|+ ||||+|++||..+
T Consensus 171 i~A~~~~nGVL~I~lPK~~~ 190 (314)
T 2bol_A 171 IQATITTDDVLVIEAPVNEP 190 (314)
T ss_dssp CEEEECSSSEEEEEEEBSSC
T ss_pred cEEEEeCCCEEEEEEeccCc
Confidence 999999 9999999999653
No 9
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.82 E-value=2.1e-20 Score=135.28 Aligned_cols=90 Identities=23% Similarity=0.291 Sum_probs=59.1
Q ss_pred cceEEEcCCeEEEEEECCCCCCcceeEEeccc-------c-cccCcceEEEEeeecceEEEEEECCCCCccCCceEEE-e
Q 041378 48 PADIYEDPSHYSFILDMPGLEASNIKKKKGQS-------A-ENEGAVKAIRIERRRARNMRKFTLPQDSNLEEVKAIY-K 118 (145)
Q Consensus 48 ~~~v~e~~~~~~i~~~lpG~~~e~i~V~~~~~-------~-~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~i~A~~-~ 118 (145)
.++|++++++|+|.++||||++++|+|...+. . ...++..++++ .|.|+|.||.+||.++|+|+| +
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~r-----eF~R~~~LP~~Vd~~~i~A~~s~ 139 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISR-----EFHRKYRIPADVDPLTITSSLSS 139 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEE-----EEEEEEECTTTCCTTTCEEEECT
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEE-----EEEEEEECCCCcChhHeEEEEcC
Confidence 47999999999999999999999999932211 0 01122344433 499999999999999999999 7
Q ss_pred CCEEEEEEeCcCCCCCCCCeeEEecc
Q 041378 119 DGVLTVTVAKKVPEVSRRPKTVTIPV 144 (145)
Q Consensus 119 ~GvL~I~~pK~~~~~~~~~~~I~I~v 144 (145)
||+|+|++||... ....++|+|+.
T Consensus 140 dGvL~I~lPK~~~--~~~~r~I~I~~ 163 (175)
T 2klr_A 140 DGVLTVNGPRKQV--SGPERTIPITR 163 (175)
T ss_dssp TSCEEEEEECC---------------
T ss_pred CCEEEEEEECCCC--CCCCeEEEEec
Confidence 9999999999653 22458999875
No 10
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.80 E-value=4e-19 Score=114.43 Aligned_cols=74 Identities=18% Similarity=0.224 Sum_probs=57.5
Q ss_pred EEEcCCeEEEEEECCCCCCcceeEEeccc-------cc-ccCcceEEEEeeecceEEEEEECCCCCccCCceEEEe-CCE
Q 041378 51 IYEDPSHYSFILDMPGLEASNIKKKKGQS-------AE-NEGAVKAIRIERRRARNMRKFTLPQDSNLEEVKAIYK-DGV 121 (145)
Q Consensus 51 v~e~~~~~~i~~~lpG~~~e~i~V~~~~~-------~~-~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~i~A~~~-~Gv 121 (145)
+.|++++|.|.++||||++++|+|...+. .. ..+. .+..+++|.|+|.||.+||.++|+|+|+ ||+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~-----~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~Gv 76 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDE-----HGYISRCFTRKYTLPPGVDPTQVSSSLSPEGT 76 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC------------CCCEEEEEEEECCTTCCGGGCEEEECTTSE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCC-----CCEEEEEEEEEEECCCCcChHHcEEEECCCCE
Confidence 35789999999999999999999933221 00 1111 1223578999999999999999999998 999
Q ss_pred EEEEEeCc
Q 041378 122 LTVTVAKK 129 (145)
Q Consensus 122 L~I~~pK~ 129 (145)
|+|++||.
T Consensus 77 L~I~lPK~ 84 (85)
T 3q9p_A 77 LTVEAPMP 84 (85)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 99999994
No 11
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.77 E-value=1.7e-18 Score=112.60 Aligned_cols=73 Identities=25% Similarity=0.316 Sum_probs=55.0
Q ss_pred EcCCeEEEEEECCCCCCcceeEEeccc--------ccccCcceEEEEeeecceEEEEEECCCCCccCCceEEE-eCCEEE
Q 041378 53 EDPSHYSFILDMPGLEASNIKKKKGQS--------AENEGAVKAIRIERRRARNMRKFTLPQDSNLEEVKAIY-KDGVLT 123 (145)
Q Consensus 53 e~~~~~~i~~~lpG~~~e~i~V~~~~~--------~~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~i~A~~-~~GvL~ 123 (145)
+++++|+|.++||||++++|+|...+. ....++..++++ .|.|+|.||.+||.+.|+|+| +||+|+
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~-----ef~R~~~LP~~vd~~~i~A~~~~~GvL~ 77 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISR-----EFHRKYRIPADVDPLTITSSMSSDGVLT 77 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEE-----EEEEEEECCTTBCGGGCEEEECTTSEEE
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEE-----EEEEEEECCCCcChhHcEEEECCCCEEE
Confidence 577899999999999999999932221 001122344433 499999999999999999999 899999
Q ss_pred EEEeCcC
Q 041378 124 VTVAKKV 130 (145)
Q Consensus 124 I~~pK~~ 130 (145)
|++||..
T Consensus 78 I~~pK~~ 84 (90)
T 2y1y_A 78 VNGPRKQ 84 (90)
T ss_dssp EEECBC-
T ss_pred EEEEcCC
Confidence 9999965
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.66 E-value=1.1e-16 Score=125.11 Aligned_cols=82 Identities=12% Similarity=0.150 Sum_probs=58.9
Q ss_pred CcceEEEcC---CeEEEEEEC-CCCCCcceeEEecc-------cccccCcceEEEEeeecceEEEEEECCCCCccCCceE
Q 041378 47 TPADIYEDP---SHYSFILDM-PGLEASNIKKKKGQ-------SAENEGAVKAIRIERRRARNMRKFTLPQDSNLEEVKA 115 (145)
Q Consensus 47 p~~~v~e~~---~~~~i~~~l-pG~~~e~i~V~~~~-------~~~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~i~A 115 (145)
..++|.+++ +.|.|.++| ||+++++|+|...+ +. ..+...++++|+.+|+|+|+|.||++||.++|+|
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~-~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A 299 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVT-GKEEKTENASHSEHREFYKAFVTPEVVDASKTQA 299 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEE-C------------CEEEEEEEECSSEECGGGCEE
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEE-eccCCceEEEEEeeeEEEEEEECCCCcChHHeEE
Confidence 456777655 489999999 99999999993211 11 1112256788999999999999999999999999
Q ss_pred EEeCCEEEEEEeCc
Q 041378 116 IYKDGVLTVTVAKK 129 (145)
Q Consensus 116 ~~~~GvL~I~~pK~ 129 (145)
+|+||||+|++||.
T Consensus 300 ~~~dGvL~i~~Pk~ 313 (314)
T 2bol_A 300 EIVDGLMVVEAPLF 313 (314)
T ss_dssp EEETTEEEEEEEEE
T ss_pred EEeCCEEEEEEecC
Confidence 99999999999985
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.97 E-value=5.5e-09 Score=69.90 Aligned_cols=80 Identities=10% Similarity=0.068 Sum_probs=65.4
Q ss_pred cCCcceEEEcCCeEEEEEECCCCCCcceeEEecccccccCcceEEEEe-eecceEEEEEECCCCCccCCceEEEeCCEEE
Q 041378 45 LRTPADIYEDPSHYSFILDMPGLEASNIKKKKGQSAENEGAVKAIRIE-RRRARNMRKFTLPQDSNLEEVKAIYKDGVLT 123 (145)
Q Consensus 45 ~~p~~~v~e~~~~~~i~~~lpG~~~e~i~V~~~~~~~~~~~~~~~~~e-~~~~~f~r~i~LP~~vd~~~i~A~~~~GvL~ 123 (145)
..+.++++++.+.+.|++.+||+.++++.|...+. .-.+... .....|...+.|+..|+++..++++.+|.|.
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~------~l~v~~~~~~~~~y~~~~~L~~~I~~e~s~~~~~~~~l~ 81 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEK------ELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIE 81 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSS------CEEEEEECTTSSEEEEEECBSSCCCGGGEEEEECSSSEE
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcC------EEEEEEEeCCCcEEEEEeeCCCcCCccccEEEEECCEEE
Confidence 45689999999999999999999999999976554 1111111 1235799999999999999999999999999
Q ss_pred EEEeCcC
Q 041378 124 VTVAKKV 130 (145)
Q Consensus 124 I~~pK~~ 130 (145)
|+|+|..
T Consensus 82 i~L~K~~ 88 (114)
T 1rl1_A 82 IKLKKPE 88 (114)
T ss_dssp EEEECSS
T ss_pred EEEEcCC
Confidence 9999965
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.91 E-value=7.1e-09 Score=66.61 Aligned_cols=79 Identities=14% Similarity=0.144 Sum_probs=64.4
Q ss_pred CCcceEEEcCCeEEEEEECCCCCCcceeEEecccccccCcceEEEEe-eecceEEEEEECCCCCccCCceEEEeCCEEEE
Q 041378 46 RTPADIYEDPSHYSFILDMPGLEASNIKKKKGQSAENEGAVKAIRIE-RRRARNMRKFTLPQDSNLEEVKAIYKDGVLTV 124 (145)
Q Consensus 46 ~p~~~v~e~~~~~~i~~~lpG~~~e~i~V~~~~~~~~~~~~~~~~~e-~~~~~f~r~i~LP~~vd~~~i~A~~~~GvL~I 124 (145)
.+.++++++.+.+.|++.+||+.++++.|...+. .-.+... .....|...+.|+..|+++..++++.+|.|.|
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~------~l~v~~~~~~~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i 75 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQ------ILSVVIEVPGEDAYYLQPRLFGKIIPDKCKYEVLSTKIEI 75 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSS------BEEEEECCTTSCCEEECCBBSSCBCGGGCEEEECSSCEEE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEECC------EEEEEEEcCCCcEEEEeeEcCCccCchhEEEEEECCEEEE
Confidence 4689999999999999999999999999976554 1111111 12346999999999999999999999999999
Q ss_pred EEeCcC
Q 041378 125 TVAKKV 130 (145)
Q Consensus 125 ~~pK~~ 130 (145)
+|+|..
T Consensus 76 ~L~K~~ 81 (92)
T 2xcm_C 76 CLAKAD 81 (92)
T ss_dssp EEEBSS
T ss_pred EEEcCC
Confidence 999964
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.42 E-value=1.2e-06 Score=60.15 Aligned_cols=78 Identities=15% Similarity=0.178 Sum_probs=64.4
Q ss_pred ccCCcceEEEcCCeEEEEEECCCCC--CcceeEEecccccccCcceEEEEeeecceEEEEEECCCCC-ccCCceEEEe--
Q 041378 44 ILRTPADIYEDPSHYSFILDMPGLE--ASNIKKKKGQSAENEGAVKAIRIERRRARNMRKFTLPQDS-NLEEVKAIYK-- 118 (145)
Q Consensus 44 ~~~p~~~v~e~~~~~~i~~~lpG~~--~e~i~V~~~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v-d~~~i~A~~~-- 118 (145)
+..|.+.|.++++.++|.+.+|..+ .+++++...+. .-.. +..-|..++.||..| +.+..+|+|+
T Consensus 1 MiTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~------~F~F----~~~PYyLRL~LP~~V~e~~~~kA~YD~d 70 (134)
T 2k8q_A 1 GITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQEN------MIIF----HLSPYYLRLRFPHELIDDERSTAQYDSK 70 (134)
T ss_dssp CCCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSS------SEEE----CSSSSCEEECCSSCEECCSSCEEEEETT
T ss_pred CcCceEEEEECCCEEEEEEEcCccccCccccEEEEeCC------EEEE----ecCCeEEEecCCCeeecCCCcceeEecc
Confidence 3568999999999999999999999 88998877665 1221 234578889999999 8888999995
Q ss_pred CCEEEEEEeCcCC
Q 041378 119 DGVLTVTVAKKVP 131 (145)
Q Consensus 119 ~GvL~I~~pK~~~ 131 (145)
.|.|+|++||..+
T Consensus 71 ~~~~~VtLpK~~~ 83 (134)
T 2k8q_A 71 DECINVKVAKLNK 83 (134)
T ss_dssp TTEEEEEEEESST
T ss_pred CCEEEEEEeCCCC
Confidence 9999999999664
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.22 E-value=2.3e-05 Score=52.14 Aligned_cols=80 Identities=15% Similarity=0.200 Sum_probs=64.1
Q ss_pred ccccCCcceEEEcCCeEEEEEECCCCC--CcceeEEecccccccCcceEEEEeeecceEEEEEECCCCC-ccCCceEEEe
Q 041378 42 RAILRTPADIYEDPSHYSFILDMPGLE--ASNIKKKKGQSAENEGAVKAIRIERRRARNMRKFTLPQDS-NLEEVKAIYK 118 (145)
Q Consensus 42 ~~~~~p~~~v~e~~~~~~i~~~lpG~~--~e~i~V~~~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~v-d~~~i~A~~~ 118 (145)
..+..|.+.|.++++.+.|.+.+|-.. ..++.+...+. .-.. ...-|..++.||..| +.+.-+|+|+
T Consensus 13 ~~~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~------~F~F----~~~PYyLRL~lP~~vved~~~~A~YD 82 (115)
T 3eud_A 13 DKMITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQEN------MIIF----HLSPYYLRLRFPHELIDDERSTAQYD 82 (115)
T ss_dssp -CCBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETT------EEEE----EETTEEEEEECSSCEECSTTCEEEEE
T ss_pred CCEeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCC------EEEE----ecCCeEEEEecCcceecCCCcceEEe
Confidence 357889999999999999999999876 77888866554 2222 123488899999988 7777899995
Q ss_pred --CCEEEEEEeCcCC
Q 041378 119 --DGVLTVTVAKKVP 131 (145)
Q Consensus 119 --~GvL~I~~pK~~~ 131 (145)
+|.++|++||..+
T Consensus 83 ~d~g~~~v~lpK~~~ 97 (115)
T 3eud_A 83 SKDECINVKVAKLNK 97 (115)
T ss_dssp TTTTEEEEEEEESST
T ss_pred CCCcEEEEEEcCCcC
Confidence 9999999999663
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.04 E-value=1.6e-05 Score=63.38 Aligned_cols=68 Identities=16% Similarity=0.254 Sum_probs=54.1
Q ss_pred cceEEEcCCeEEEEEECCCCCCcceeEEecccccccCcceEEEEeeecceEEEEEECCCCCccCC-ceEEEeCCEEEEEE
Q 041378 48 PADIYEDPSHYSFILDMPGLEASNIKKKKGQSAENEGAVKAIRIERRRARNMRKFTLPQDSNLEE-VKAIYKDGVLTVTV 126 (145)
Q Consensus 48 ~~~v~e~~~~~~i~~~lpG~~~e~i~V~~~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~-i~A~~~~GvL~I~~ 126 (145)
++.|... .|.+.+.|||+++++|++.+..+ .-.+ ..+.|+|.|.||..+.... ..|.|+||.|+|.+
T Consensus 299 ~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gd------eL~v----~~g~~rR~i~LP~~L~~~~v~~A~~~~~~L~i~~ 366 (374)
T 3igf_A 299 PITIDTH--NRQVRLFLPGFDKKQVKLTQYGP------EVTV----EAGDQRRNIFLPPALSGRPITGAKFQNNYLIISF 366 (374)
T ss_dssp SEEEETT--TTEEEEECTTCCGGGCEEEEETT------EEEE----EETTEEEEEECCTTTTTCCEEEEEEETTEEEEEE
T ss_pred CEEEEec--cEEEEEECCCCCHHHeEEEEECC------eEEE----EECCEeecccCCHHHcCCCccccEEECCEEEEEE
Confidence 4555333 89999999999999999976554 2222 3588999999999986654 78999999999998
Q ss_pred e
Q 041378 127 A 127 (145)
Q Consensus 127 p 127 (145)
-
T Consensus 367 ~ 367 (374)
T 3igf_A 367 L 367 (374)
T ss_dssp C
T ss_pred e
Confidence 4
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.73 E-value=0.00068 Score=45.81 Aligned_cols=81 Identities=10% Similarity=0.069 Sum_probs=62.4
Q ss_pred cCCcceEEEcCCeEEEEEECCCC---CCcceeEEecccccccCcceEEEEeeecceEEEEEE-CCCCCccCCceEEEeCC
Q 041378 45 LRTPADIYEDPSHYSFILDMPGL---EASNIKKKKGQSAENEGAVKAIRIERRRARNMRKFT-LPQDSNLEEVKAIYKDG 120 (145)
Q Consensus 45 ~~p~~~v~e~~~~~~i~~~lpG~---~~e~i~V~~~~~~~~~~~~~~~~~e~~~~~f~r~i~-LP~~vd~~~i~A~~~~G 120 (145)
..+.++++++.+.+.|.+.+||+ .++++.|...+.. -...........|.-.+. |-..|+++.-+.....+
T Consensus 19 ~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~-----l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~~v~~~ 93 (127)
T 1x5m_A 19 KISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERS-----FDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTD 93 (127)
T ss_dssp ECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSE-----EEEEECSCSSSCEEEEEECBSSCCCTTTCEEEEETT
T ss_pred CccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCE-----EEEEEEcCCCCcEEEEhHHhcCccCcccCEEEEeCC
Confidence 34589999999999999999999 8899999665541 111111111236888885 99999999988888999
Q ss_pred EEEEEEeCcC
Q 041378 121 VLTVTVAKKV 130 (145)
Q Consensus 121 vL~I~~pK~~ 130 (145)
.+.|+|.|..
T Consensus 94 kVei~L~K~~ 103 (127)
T 1x5m_A 94 TVLILCRKKV 103 (127)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEEECC
Confidence 9999999964
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.57 E-value=0.00082 Score=46.03 Aligned_cols=81 Identities=11% Similarity=0.071 Sum_probs=62.1
Q ss_pred cCCcceEEEc-CCeEEEEEECCCCCCcceeEEecccccccCcceEEEEeeec------------ceEEEEEECCCCCccC
Q 041378 45 LRTPADIYED-PSHYSFILDMPGLEASNIKKKKGQSAENEGAVKAIRIERRR------------ARNMRKFTLPQDSNLE 111 (145)
Q Consensus 45 ~~p~~~v~e~-~~~~~i~~~lpG~~~e~i~V~~~~~~~~~~~~~~~~~e~~~------------~~f~r~i~LP~~vd~~ 111 (145)
..+.++++++ .+.+.|++.++++.++++.|...+.. -......... ..|.-.+.|-..|+++
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~-----l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe 92 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQD-----FTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPE 92 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSE-----EEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEE
T ss_pred cCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCE-----EEEEEEcCCCcccccccccCcceeEEEeccccccCCch
Confidence 4679999999 99999999999999999999655541 0111000011 1688888999999999
Q ss_pred CceEEEeCCEEEEEEeCcC
Q 041378 112 EVKAIYKDGVLTVTVAKKV 130 (145)
Q Consensus 112 ~i~A~~~~GvL~I~~pK~~ 130 (145)
.-+.....+.+.|.|.|..
T Consensus 93 ~S~~~v~~~kIeI~L~K~e 111 (134)
T 1wh0_A 93 QCTFCFTASRIDICLRKRQ 111 (134)
T ss_dssp EEEEEECSSEEEEEEEESS
T ss_pred hCEEEEeCCEEEEEEEECC
Confidence 8888888999999999954
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.56 E-value=0.0019 Score=43.38 Aligned_cols=84 Identities=14% Similarity=0.164 Sum_probs=62.6
Q ss_pred ccccCCcceEEEcCCeEEEEEECC-CC-CCcceeEEecccccccCcceEEEEeeecceEEEEEECCCCCccCCceEEEeC
Q 041378 42 RAILRTPADIYEDPSHYSFILDMP-GL-EASNIKKKKGQSAENEGAVKAIRIERRRARNMRKFTLPQDSNLEEVKAIYKD 119 (145)
Q Consensus 42 ~~~~~p~~~v~e~~~~~~i~~~lp-G~-~~e~i~V~~~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~i~A~~~~ 119 (145)
.+...|.+.++++.+.+.|++.|| |+ ++++|.|...... -...........+.-...|...|+++.-+..+.+
T Consensus 15 nG~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~-----l~v~~~~~~~~~~~~~~~L~~~I~~e~S~w~i~~ 89 (124)
T 1wgv_A 15 NGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSS-----IRVAMLEENGERVLMEGKLTHKINTESSLWSLEP 89 (124)
T ss_dssp SSBCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSE-----EEEEEECSSSEEEEEEEEBSSCBCTTTCEEEECT
T ss_pred CCCcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCE-----EEEEEEccCCCceEEcccccCcCCCcCCEEEEeC
Confidence 356678999999999999999999 87 8999999665541 1111110012235567889999999998899988
Q ss_pred CE-EEEEEeCcC
Q 041378 120 GV-LTVTVAKKV 130 (145)
Q Consensus 120 Gv-L~I~~pK~~ 130 (145)
+- |.|+|-|..
T Consensus 90 ~k~v~i~L~K~~ 101 (124)
T 1wgv_A 90 GKCVLVNLSKVG 101 (124)
T ss_dssp TSEEEEEECBSS
T ss_pred CCEEEEEEEECC
Confidence 75 999999864
No 21
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.44 E-value=0.0029 Score=42.34 Aligned_cols=81 Identities=14% Similarity=0.091 Sum_probs=61.5
Q ss_pred ccccCCcceEEEcCCeEEEEEECC-C--CCCcceeEEecccccccCcceEEEEeeecceEEEEEECCCCCccCCceEEEe
Q 041378 42 RAILRTPADIYEDPSHYSFILDMP-G--LEASNIKKKKGQSAENEGAVKAIRIERRRARNMRKFTLPQDSNLEEVKAIYK 118 (145)
Q Consensus 42 ~~~~~p~~~v~e~~~~~~i~~~lp-G--~~~e~i~V~~~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~i~A~~~ 118 (145)
.+...|.+.++++.+.+.|++.|| | ++.++|.|...... -.+ ......+.-...|...|+++.-...+.
T Consensus 12 nG~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~------l~v--~~kg~~~~~~g~L~~~I~~deS~w~i~ 83 (121)
T 3qor_A 12 NGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRH------LRV--GLKGQPAIIDGELYNEVKVEESSWLIA 83 (121)
T ss_dssp SSCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTE------EEE--EETTSCCSEEEEBSSCBCGGGCEEEEE
T ss_pred CCCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCE------EEE--EEcCcceEEeccccccccccccEEEEc
Confidence 456778999999999999999999 4 79999999655441 111 111112344668999999999899999
Q ss_pred CC-EEEEEEeCcC
Q 041378 119 DG-VLTVTVAKKV 130 (145)
Q Consensus 119 ~G-vL~I~~pK~~ 130 (145)
+| .|.|+|-|..
T Consensus 84 ~~~~i~i~L~K~~ 96 (121)
T 3qor_A 84 DGAVVTVHLEKIN 96 (121)
T ss_dssp TTTEEEEEEEBSS
T ss_pred CCCEEEEEEEECC
Confidence 88 9999999864
No 22
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.19 E-value=0.0029 Score=42.88 Aligned_cols=75 Identities=12% Similarity=0.119 Sum_probs=55.9
Q ss_pred CCcceEEEcCCeEEEEEECC-CCCCcceeEEecccccccCcceEEEEeeecceEEEEEECCCCCccCCceEEEeCCEEEE
Q 041378 46 RTPADIYEDPSHYSFILDMP-GLEASNIKKKKGQSAENEGAVKAIRIERRRARNMRKFTLPQDSNLEEVKAIYKDGVLTV 124 (145)
Q Consensus 46 ~p~~~v~e~~~~~~i~~~lp-G~~~e~i~V~~~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~i~A~~~~GvL~I 124 (145)
.|.+.++++.+.+.|.+.|| |+++++|.|...... -.+.. .... .-...|...|+++.-+..+.+|.|.|
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~------l~v~~--~g~~-~~~~~L~~~I~~e~S~w~i~~~kv~i 74 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKK------ICVKN--QGEI-VIDGELLHEVDVSSLWWVINGDVVDV 74 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEETTE------EEEEE--TTEE-EEEEEBSSCEEEEEEEEEEETTEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEECCE------EEEEE--CCEe-eEccccccccccccCEEEEeCCEEEE
Confidence 47899999999999999996 899999999665541 11111 1112 45678999999999888889999999
Q ss_pred EEeCc
Q 041378 125 TVAKK 129 (145)
Q Consensus 125 ~~pK~ 129 (145)
+|-|.
T Consensus 75 ~L~K~ 79 (131)
T 2o30_A 75 NVTKK 79 (131)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 99985
No 23
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.17 E-value=0.0022 Score=43.44 Aligned_cols=80 Identities=13% Similarity=0.129 Sum_probs=59.9
Q ss_pred cccCCcceEEEcCCeEEEEEECC-C--CCCcceeEEecccccccCcceEEEEeeecceEEEEEECCCCCccCCceEEEeC
Q 041378 43 AILRTPADIYEDPSHYSFILDMP-G--LEASNIKKKKGQSAENEGAVKAIRIERRRARNMRKFTLPQDSNLEEVKAIYKD 119 (145)
Q Consensus 43 ~~~~p~~~v~e~~~~~~i~~~lp-G--~~~e~i~V~~~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~i~A~~~~ 119 (145)
+...|.+.++++.+.+.|++.|| | +++++|.|...... -.+.. ....+.-...|...|+++.-+.++.+
T Consensus 4 g~~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~------l~v~~--kg~~~~~~~~L~~~I~~e~s~w~i~~ 75 (131)
T 1wfi_A 4 GSSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRH------LRVGL--KGQPPVVDGELYNEVKVEESSWLIED 75 (131)
T ss_dssp SSSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTE------EEEEE--TTSCCSBCSCBSSCBCSTTCEEEEET
T ss_pred CCCCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCE------EEEEE--CCceEEEecccccccccccCEEEEcC
Confidence 55678999999999999999999 6 89999999654431 11110 01112334568899999998999998
Q ss_pred C-EEEEEEeCcC
Q 041378 120 G-VLTVTVAKKV 130 (145)
Q Consensus 120 G-vL~I~~pK~~ 130 (145)
| .|.|+|-|..
T Consensus 76 ~k~v~i~L~K~~ 87 (131)
T 1wfi_A 76 GKVVTVHLEKIN 87 (131)
T ss_dssp TTEEEEEEEBSS
T ss_pred CCEEEEEEEECC
Confidence 8 8999999965
No 24
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.15 E-value=0.0034 Score=42.23 Aligned_cols=76 Identities=9% Similarity=0.058 Sum_probs=57.1
Q ss_pred cceEEEcCCeEEEEEECCCCCCcceeEEecccccccCcceEEEEe-eecceEEEEEECCCCCccCCceEEEeCCEEEEEE
Q 041378 48 PADIYEDPSHYSFILDMPGLEASNIKKKKGQSAENEGAVKAIRIE-RRRARNMRKFTLPQDSNLEEVKAIYKDGVLTVTV 126 (145)
Q Consensus 48 ~~~v~e~~~~~~i~~~lpG~~~e~i~V~~~~~~~~~~~~~~~~~e-~~~~~f~r~i~LP~~vd~~~i~A~~~~GvL~I~~ 126 (145)
.++++++.+.+.|++.+|+. +++.|...+.. -...... .....|.-.+.|-..|+++.-+.+..++.+.|+|
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~-----l~~~~~~~~~~~~y~~~l~L~~~I~~e~S~~~v~~~kiei~L 77 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSK-----LTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRSILCCL 77 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTE-----EEEEEEETTTTEEEEEEEEBSSCEEEEEEEEEECSSCEEEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCE-----EEEEEEeCCCCceEEEEEEccceeccccCEEEECCCEEEEEE
Confidence 79999999999999999996 56666544330 1111110 1124588999999999999988888888999999
Q ss_pred eCcC
Q 041378 127 AKKV 130 (145)
Q Consensus 127 pK~~ 130 (145)
.|..
T Consensus 78 ~K~~ 81 (125)
T 1ejf_A 78 RKGE 81 (125)
T ss_dssp EESS
T ss_pred EECC
Confidence 9965
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.03 E-value=0.012 Score=41.22 Aligned_cols=78 Identities=15% Similarity=0.133 Sum_probs=59.9
Q ss_pred ccCCcceEEEcCCeEEEEEECC-CCCCcceeEEecccccccCcceEEEEeeecceEEEEEECCCCCccCCceEEEeCCE-
Q 041378 44 ILRTPADIYEDPSHYSFILDMP-GLEASNIKKKKGQSAENEGAVKAIRIERRRARNMRKFTLPQDSNLEEVKAIYKDGV- 121 (145)
Q Consensus 44 ~~~p~~~v~e~~~~~~i~~~lp-G~~~e~i~V~~~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~i~A~~~~Gv- 121 (145)
...|.+.++++.+.+.|++.|| |++.++|.|...... -.+.. . +.-.-...|...|+++.-+.++.++.
T Consensus 11 ~~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~------L~v~~--k-g~~~l~g~L~~~I~~eeS~w~i~~~k~ 81 (157)
T 2rh0_A 11 CGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRH------VALAV--G-GREILKGKLFDSTIADEGTWTLEDRKM 81 (157)
T ss_dssp EECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSE------EEEEE--T-TEEEEEEEBSSCBCGGGCEEEEECCCE
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCcccceEEEEecCE------EEEEE--C-CEEEEeeccccccCccccEEEEcCCcE
Confidence 4567999999999999999998 899999999765541 11111 1 11235678999999999899998875
Q ss_pred EEEEEeCcC
Q 041378 122 LTVTVAKKV 130 (145)
Q Consensus 122 L~I~~pK~~ 130 (145)
|.|+|-|..
T Consensus 82 v~I~L~K~~ 90 (157)
T 2rh0_A 82 VRIVLTKTK 90 (157)
T ss_dssp EEEEEEBSS
T ss_pred EEEEEEEcC
Confidence 999999964
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=96.82 E-value=0.0045 Score=43.09 Aligned_cols=78 Identities=10% Similarity=0.006 Sum_probs=57.7
Q ss_pred cCCcceEEEcCCeEEEEEECCCCCCcceeEEec-ccccccCcceEEEEeeecceEEEEEECCCCCccCCceEEEeCCEEE
Q 041378 45 LRTPADIYEDPSHYSFILDMPGLEASNIKKKKG-QSAENEGAVKAIRIERRRARNMRKFTLPQDSNLEEVKAIYKDGVLT 123 (145)
Q Consensus 45 ~~p~~~v~e~~~~~~i~~~lpG~~~e~i~V~~~-~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~i~A~~~~GvL~ 123 (145)
..|.++++++.+.+.|++.||++ ++++|... +. .-.+.........|.-.+.|-..|+++ -+.+..+.-+.
T Consensus 3 ~~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~-----~l~~~~~~~~~~~y~~~l~L~~~Idpe-S~~~v~~~kIe 74 (150)
T 2kmw_A 3 RNPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQG-----LFSFSALGAQGERFEFSLELYGKIMTE-YRKNVGLRNII 74 (150)
T ss_dssp ECCCEEEEECSSEEEEEECCSSE--EEEEECCCTTE-----EEEEEEETTTTEEEEEEEEBSSCEEEE-EEEEEESSSEE
T ss_pred cCCcEEEEeCCCEEEEEEEeCCC--CceEEEEecCC-----EEEEEEEcCCCceEEEEeEhhhccccc-ceEEecCCEEE
Confidence 35789999999999999999997 46666544 22 011111111224689999999999999 78888888899
Q ss_pred EEEeCcC
Q 041378 124 VTVAKKV 130 (145)
Q Consensus 124 I~~pK~~ 130 (145)
|+|.|+.
T Consensus 75 i~L~K~e 81 (150)
T 2kmw_A 75 FSIQKEE 81 (150)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9999965
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=96.76 E-value=0.00093 Score=45.66 Aligned_cols=79 Identities=9% Similarity=0.014 Sum_probs=50.9
Q ss_pred cCCcceEEEcCCe-------EEEEEECCCCCCcceeEEecccccccCcceEEEEee------ecceEEEEEECCCCCccC
Q 041378 45 LRTPADIYEDPSH-------YSFILDMPGLEASNIKKKKGQSAENEGAVKAIRIER------RRARNMRKFTLPQDSNLE 111 (145)
Q Consensus 45 ~~p~~~v~e~~~~-------~~i~~~lpG~~~e~i~V~~~~~~~~~~~~~~~~~e~------~~~~f~r~i~LP~~vd~~ 111 (145)
..|.+.++++.+. +.|++.+|+++ ++.|...+.. -.+..... ....|.-.+.|...|+++
T Consensus 5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~~~-----l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe 77 (134)
T 2cg9_X 5 INPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKPSY-----IELKAQSKPHVGDENVHHYQLHIDLYKEIIPE 77 (134)
T ss_dssp ------CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCSSE-----EEECCEEC-------CEEBCEEEECSSCCCSS
T ss_pred cCCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEECCE-----EEEEEecccccCCccCceEEEEEEChhhcccc
Confidence 4578888998877 99999999975 5555332220 00000000 023588889999999999
Q ss_pred CceEEEeCCE-EEEEEeCcC
Q 041378 112 EVKAIYKDGV-LTVTVAKKV 130 (145)
Q Consensus 112 ~i~A~~~~Gv-L~I~~pK~~ 130 (145)
.-++.+.++. |.|+|.|+.
T Consensus 78 ~S~~~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 78 KTMHKVANGQHYFLKLYKKD 97 (134)
T ss_dssp SEEEEECCC--CEEEEEECS
T ss_pred ccEEEECCCEEEEEEEEECC
Confidence 9999998888 999999965
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=87.20 E-value=1.4 Score=26.95 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=29.8
Q ss_pred ceEEEEEECCCCCccCCceEEEeCCEEEEEEeCcC
Q 041378 96 ARNMRKFTLPQDSNLEEVKAIYKDGVLTVTVAKKV 130 (145)
Q Consensus 96 ~~f~r~i~LP~~vd~~~i~A~~~~GvL~I~~pK~~ 130 (145)
..|.-.+.|| +++++.|+.++.+|.|+|..-+..
T Consensus 7 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 7 DRWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp CEEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 4688899999 899999999999999999997643
No 29
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=86.52 E-value=2.3 Score=26.61 Aligned_cols=35 Identities=14% Similarity=0.239 Sum_probs=30.6
Q ss_pred cceEEEEEECCCCCccCCceEEEeCCEEEEEEeCcC
Q 041378 95 RARNMRKFTLPQDSNLEEVKAIYKDGVLTVTVAKKV 130 (145)
Q Consensus 95 ~~~f~r~i~LP~~vd~~~i~A~~~~GvL~I~~pK~~ 130 (145)
...|.-.+.|| +++.+.|+.++.+|.|+|..-+..
T Consensus 13 ~~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~ 47 (100)
T 3gla_A 13 VNHFVLYADLP-GIDPSQIEVQMDKGILSIRGERKS 47 (100)
T ss_dssp SSEEEEEEECT-TSCGGGCEEEEETTEEEEEEEECC
T ss_pred CCEEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcC
Confidence 45788999999 799999999999999999987654
No 30
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=85.76 E-value=4.1 Score=27.88 Aligned_cols=34 Identities=15% Similarity=0.059 Sum_probs=30.1
Q ss_pred ceEEEEEECCCCCccCCceEEEeCCEEEEEEeCcC
Q 041378 96 ARNMRKFTLPQDSNLEEVKAIYKDGVLTVTVAKKV 130 (145)
Q Consensus 96 ~~f~r~i~LP~~vd~~~i~A~~~~GvL~I~~pK~~ 130 (145)
..|.-.+.|| +++.+.|+.++.+|.|+|..-+..
T Consensus 66 ~~~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 66 QHIKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp SEEEEEEECT-TCCGGGEEEEEETTEEEEEEECCC
T ss_pred CEEEEEEECC-CCChHhEEEEEECCEEEEEEEEcc
Confidence 4688899999 789999999999999999998754
No 31
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=84.81 E-value=1.9 Score=26.59 Aligned_cols=33 Identities=18% Similarity=0.129 Sum_probs=29.5
Q ss_pred ceEEEEEECCCCCccCCceEEEeCCEEEEEEeCc
Q 041378 96 ARNMRKFTLPQDSNLEEVKAIYKDGVLTVTVAKK 129 (145)
Q Consensus 96 ~~f~r~i~LP~~vd~~~i~A~~~~GvL~I~~pK~ 129 (145)
..|.-.+.|| +++.+.|+.++.+|.|+|..-+.
T Consensus 6 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 38 (90)
T 2y1y_A 6 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHE 38 (90)
T ss_dssp CCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEe
Confidence 4688899999 89999999999999999998764
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=82.65 E-value=2.6 Score=26.67 Aligned_cols=34 Identities=9% Similarity=-0.022 Sum_probs=30.1
Q ss_pred ceEEEEEECCCCCccCCceEEEeCCEEEEEEeCcC
Q 041378 96 ARNMRKFTLPQDSNLEEVKAIYKDGVLTVTVAKKV 130 (145)
Q Consensus 96 ~~f~r~i~LP~~vd~~~i~A~~~~GvL~I~~pK~~ 130 (145)
..|.-.+.|| +++.+.|+.++.+|.|+|..-+..
T Consensus 11 ~~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 11 GYFSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp SCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 4688899999 899999999999999999997743
No 33
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=82.16 E-value=2.7 Score=26.83 Aligned_cols=34 Identities=6% Similarity=0.110 Sum_probs=30.2
Q ss_pred cceEEEEEECCCCCccCCceEEEeCCEEEEEEeCc
Q 041378 95 RARNMRKFTLPQDSNLEEVKAIYKDGVLTVTVAKK 129 (145)
Q Consensus 95 ~~~f~r~i~LP~~vd~~~i~A~~~~GvL~I~~pK~ 129 (145)
...|.-.+.|| +++.+.|+.++.+|.|+|..-+.
T Consensus 11 ~~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 11 RDKFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp SSEEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 45789999999 89999999999999999998653
No 34
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=81.91 E-value=3.2 Score=26.18 Aligned_cols=33 Identities=15% Similarity=0.141 Sum_probs=29.5
Q ss_pred cceEEEEEECCCCCccCCceEEEeCCEEEEEEeC
Q 041378 95 RARNMRKFTLPQDSNLEEVKAIYKDGVLTVTVAK 128 (145)
Q Consensus 95 ~~~f~r~i~LP~~vd~~~i~A~~~~GvL~I~~pK 128 (145)
...|.-.+.|| +++.+.|+.+++++.|+|..-+
T Consensus 15 ~~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~ 47 (102)
T 4fei_A 15 GTHLDLLLDVP-GVDAGTLALAEDGGQLTVSGER 47 (102)
T ss_dssp TTEEEEEEECT-TCCGGGCEEEEETTEEEEEEEE
T ss_pred CCEEEEEEECC-CCchHhEEEEEECCEEEEEEEE
Confidence 35789999999 8999999999999999998765
No 35
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=78.73 E-value=5.5 Score=25.91 Aligned_cols=34 Identities=18% Similarity=0.167 Sum_probs=29.9
Q ss_pred ceEEEEEECCCCCccCCceEEEeC-CEEEEEEeCcC
Q 041378 96 ARNMRKFTLPQDSNLEEVKAIYKD-GVLTVTVAKKV 130 (145)
Q Consensus 96 ~~f~r~i~LP~~vd~~~i~A~~~~-GvL~I~~pK~~ 130 (145)
..|.-.+.|| +++.+.|+.++.+ |.|+|..-+..
T Consensus 34 ~~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~ 68 (123)
T 3aab_A 34 GYLVVVADLA-GFNKEKIKARVSGQNELIIEAEREI 68 (123)
T ss_dssp TEEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCC
T ss_pred CEEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEec
Confidence 4588899999 7999999999999 99999998754
No 36
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=76.81 E-value=11 Score=25.56 Aligned_cols=34 Identities=29% Similarity=0.307 Sum_probs=29.1
Q ss_pred ceEEEEEECCCCCccCCceEEEe-CCEEEEEEeCcC
Q 041378 96 ARNMRKFTLPQDSNLEEVKAIYK-DGVLTVTVAKKV 130 (145)
Q Consensus 96 ~~f~r~i~LP~~vd~~~i~A~~~-~GvL~I~~pK~~ 130 (145)
..|.-.+.|| +++.+.|+.++. ++.|+|..-+..
T Consensus 53 d~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~ 87 (151)
T 1gme_A 53 EAHVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTK 87 (151)
T ss_dssp SEEEEEEECT-TCCGGGEEEEEETTTEEEEEECCCC
T ss_pred CEEEEEEECC-CCChHHEEEEEecCCEEEEEEEEcc
Confidence 4588899999 899999999995 679999997754
No 37
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=70.45 E-value=5.3 Score=23.82 Aligned_cols=30 Identities=20% Similarity=0.347 Sum_probs=18.9
Q ss_pred CCceEEEeCCEEEEEEeCcCCCCCCCCeeEEecc
Q 041378 111 EEVKAIYKDGVLTVTVAKKVPEVSRRPKTVTIPV 144 (145)
Q Consensus 111 ~~i~A~~~~GvL~I~~pK~~~~~~~~~~~I~I~v 144 (145)
..|.|.|+||+|+-.=|- .-....++.|.+
T Consensus 3 k~IeAiYEnGVfkPLe~l----~L~EG~kV~I~I 32 (69)
T 2nwt_A 3 KIIEAVYENGVFKPLQKV----DLKEGERVKIKL 32 (69)
T ss_dssp CCEEEEEETTEEEESSCC----CCCTTEEEEEEC
T ss_pred ceEEEEEECCEEeECCcC----CCCCCCEEEEEE
Confidence 458999999999754332 223445565554
No 38
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=68.44 E-value=8.1 Score=27.03 Aligned_cols=33 Identities=18% Similarity=0.129 Sum_probs=29.3
Q ss_pred ceEEEEEECCCCCccCCceEEEeCCEEEEEEeCc
Q 041378 96 ARNMRKFTLPQDSNLEEVKAIYKDGVLTVTVAKK 129 (145)
Q Consensus 96 ~~f~r~i~LP~~vd~~~i~A~~~~GvL~I~~pK~ 129 (145)
..|.-.+.|| +++.+.|+.++.+|.|+|..-+.
T Consensus 73 d~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~ 105 (175)
T 2klr_A 73 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHE 105 (175)
T ss_dssp SEEEEEECCS-SCCGGGEEEEEETTEEEEEEEEE
T ss_pred CeEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 4588899999 89999999999999999998764
No 39
>3elx_A Ileal bIle acid-binding protein; ileal bIle acid-bindign protein, zebrafish, cholic acid, LIP binding, transport, lipid binding protein; 1.60A {Danio rerio} SCOP: b.60.1.0 PDB: 3elz_A* 3em0_A*
Probab=50.99 E-value=52 Score=21.91 Aligned_cols=97 Identities=15% Similarity=0.160 Sum_probs=56.3
Q ss_pred HHHHHHhhcCCccccccccccccCCcceEEEcCCeEEEEEECCCCCCcceeEEeccccc--ccCcceEEEE-eeecceEE
Q 041378 23 PEEMEKMLQQPGRRYVKNARAILRTPADIYEDPSHYSFILDMPGLEASNIKKKKGQSAE--NEGAVKAIRI-ERRRARNM 99 (145)
Q Consensus 23 ~~e~~~~~~~~~~~~~~~~~~~~~p~~~v~e~~~~~~i~~~lpG~~~e~i~V~~~~~~~--~~~~~~~~~~-e~~~~~f~ 99 (145)
|+++.+.++-+.. .........|.+.|..++|.|.|...-+|++.-.++....++-+ ..++...... ....+...
T Consensus 18 fdeymkalGv~~~--~Rk~~~~~kp~~~I~~~Gd~~tikt~s~~~k~~~~~F~lGeEfee~t~dgrk~ks~vt~eg~kLv 95 (138)
T 3elx_A 18 YEPFCKLIGIPDD--VIAKGRDFKLVTEIVQNGDDFTWTQYYPNNHVVTNKFIVGKESDMETVGGKKFKGIVSMEGGKLT 95 (138)
T ss_dssp HHHHHHHTTCCHH--HHHHTTTCCCEEEEEEETTEEEEEEEEGGGEEEEEEEETTSCEEEECTTSCEEEECCEEETTEEE
T ss_pred HHHHHHHhCCCHH--HHhHHhcCCceEEEEEcCCEEEEEEEEcCCceEEEEEEcCCcEEeecCCCCEEEEEEEEECCEEE
Confidence 7777777765532 11223567789999999999999999998877777775444311 1111111111 11112222
Q ss_pred EEEECCCCCccCCceEEEeCCEEEEEEe
Q 041378 100 RKFTLPQDSNLEEVKAIYKDGVLTVTVA 127 (145)
Q Consensus 100 r~i~LP~~vd~~~i~A~~~~GvL~I~~p 127 (145)
.. .| ...+.-.+++|.|.+++-
T Consensus 96 ~~--~~----~~~~~rei~g~~Lv~~~t 117 (138)
T 3elx_A 96 IS--FP----KYQQTTEISGGKLVETST 117 (138)
T ss_dssp EE--CS----SCEEEEEEETTEEEEEEE
T ss_pred EE--eC----CcEEEEEEECCEEEEEEE
Confidence 22 12 234667788998877763
No 40
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=50.35 E-value=49 Score=21.55 Aligned_cols=33 Identities=12% Similarity=0.083 Sum_probs=25.8
Q ss_pred cceEEEEEECCCCCccCCceEEEeCCEEEEEEe
Q 041378 95 RARNMRKFTLPQDSNLEEVKAIYKDGVLTVTVA 127 (145)
Q Consensus 95 ~~~f~r~i~LP~~vd~~~i~A~~~~GvL~I~~p 127 (145)
.....-.|.||.+++.+.+++.+...-|.|.+.
T Consensus 13 ~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~ 45 (131)
T 2o30_A 13 LNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ 45 (131)
T ss_dssp TTEEEEEEECC---CCSCEEEEEETTEEEEEET
T ss_pred CCEEEEEEECCCCCCccceEEEEECCEEEEEEC
Confidence 456778899999999999999999999999873
No 41
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=45.86 E-value=11 Score=24.13 Aligned_cols=17 Identities=29% Similarity=0.536 Sum_probs=14.5
Q ss_pred CceEEEeCCEEEEEEeC
Q 041378 112 EVKAIYKDGVLTVTVAK 128 (145)
Q Consensus 112 ~i~A~~~~GvL~I~~pK 128 (145)
.+-+.+.+|||+|+++.
T Consensus 29 d~D~e~~~gVLti~f~~ 45 (106)
T 1ew4_A 29 DIDCEINGGVLTITFEN 45 (106)
T ss_dssp CCEEEEETTEEEEECTT
T ss_pred CEeeeccCCEEEEEECC
Confidence 37788999999999964
No 42
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=43.33 E-value=18 Score=23.91 Aligned_cols=16 Identities=19% Similarity=0.347 Sum_probs=14.1
Q ss_pred ceEEEeCCEEEEEEeC
Q 041378 113 VKAIYKDGVLTVTVAK 128 (145)
Q Consensus 113 i~A~~~~GvL~I~~pK 128 (145)
+-+.+.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 6788999999999964
No 43
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=42.73 E-value=76 Score=21.45 Aligned_cols=33 Identities=6% Similarity=0.195 Sum_probs=28.5
Q ss_pred cceEEEEEECCCCCccCCceEEEeCCEEEEEEe
Q 041378 95 RARNMRKFTLPQDSNLEEVKAIYKDGVLTVTVA 127 (145)
Q Consensus 95 ~~~f~r~i~LP~~vd~~~i~A~~~~GvL~I~~p 127 (145)
.....-+|.||..+..+.+++.+...-|.|.+.
T Consensus 22 ~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k 54 (157)
T 2rh0_A 22 LEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG 54 (157)
T ss_dssp SSEEEEEEECCTTCCGGGEEEEECSSEEEEEET
T ss_pred CCEEEEEEECCCCCcccceEEEEecCEEEEEEC
Confidence 456788899999999999999999999999873
No 44
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=37.62 E-value=80 Score=20.22 Aligned_cols=33 Identities=9% Similarity=0.141 Sum_probs=28.6
Q ss_pred cceEEEEEECCCCC-ccCCceEEEeCCEEEEEEe
Q 041378 95 RARNMRKFTLPQDS-NLEEVKAIYKDGVLTVTVA 127 (145)
Q Consensus 95 ~~~f~r~i~LP~~v-d~~~i~A~~~~GvL~I~~p 127 (145)
.....-+|.||..+ +.+.+++.+...-|.|.+.
T Consensus 28 ~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 28 YTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp TTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred ccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 45678899999888 9999999999999999883
No 45
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=35.88 E-value=16 Score=22.09 Aligned_cols=16 Identities=25% Similarity=0.403 Sum_probs=12.7
Q ss_pred cCCceEEEeCCEEEEE
Q 041378 110 LEEVKAIYKDGVLTVT 125 (145)
Q Consensus 110 ~~~i~A~~~~GvL~I~ 125 (145)
..+-++.|++|||+|.
T Consensus 46 KnkWKc~LKdGim~in 61 (76)
T 1nvp_C 46 KNKWKFHLKDGIMNLN 61 (76)
T ss_dssp TTEEEEEEEEEEEEET
T ss_pred CceEEEEEeccEEEEC
Confidence 4457899999999873
No 46
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=34.28 E-value=91 Score=19.92 Aligned_cols=35 Identities=6% Similarity=-0.106 Sum_probs=29.5
Q ss_pred ecceEEEEEECCCC--CccCCceEEEeCCEEEEEEeC
Q 041378 94 RRARNMRKFTLPQD--SNLEEVKAIYKDGVLTVTVAK 128 (145)
Q Consensus 94 ~~~~f~r~i~LP~~--vd~~~i~A~~~~GvL~I~~pK 128 (145)
......-+|.||.. ++.+.+.+.+...-|.|.+.-
T Consensus 24 t~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg 60 (121)
T 3qor_A 24 TLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKG 60 (121)
T ss_dssp CSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETT
T ss_pred ccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcC
Confidence 34567888999988 899999999999999998853
No 47
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=32.61 E-value=97 Score=20.23 Aligned_cols=29 Identities=28% Similarity=0.557 Sum_probs=18.8
Q ss_pred CceEEE---eCCEEEEEEeCcCCCCCCCCeeEEec
Q 041378 112 EVKAIY---KDGVLTVTVAKKVPEVSRRPKTVTIP 143 (145)
Q Consensus 112 ~i~A~~---~~GvL~I~~pK~~~~~~~~~~~I~I~ 143 (145)
+|+.+| .||+|.|++--+ ...+...|.|+
T Consensus 99 ~IeVtf~iD~nGiL~V~a~d~---~tg~~~~i~i~ 130 (135)
T 1q5l_A 99 QIEVTFDIDADGILHVSAKDK---NSGKEQKITIK 130 (135)
T ss_dssp CEEEEEEECTTSEEEEEEEET---TTCCEEEEEEE
T ss_pred EEEEEEEECCCCEEEEEEEEC---CCCCEEEEEEe
Confidence 566666 499999998532 23345666665
No 48
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=32.60 E-value=29 Score=23.07 Aligned_cols=17 Identities=35% Similarity=0.604 Sum_probs=14.4
Q ss_pred CCceEEEeCCEEEEEEe
Q 041378 111 EEVKAIYKDGVLTVTVA 127 (145)
Q Consensus 111 ~~i~A~~~~GvL~I~~p 127 (145)
..+-+.+.+|||+|+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 34778899999999995
No 49
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=31.35 E-value=63 Score=20.65 Aligned_cols=25 Identities=16% Similarity=0.133 Sum_probs=13.9
Q ss_pred EEEEECCCCCccCCceEEEeCCEEEEEEeC
Q 041378 99 MRKFTLPQDSNLEEVKAIYKDGVLTVTVAK 128 (145)
Q Consensus 99 ~r~i~LP~~vd~~~i~A~~~~GvL~I~~pK 128 (145)
.|++..|.+ ++|.++|.+|.|.+.+
T Consensus 22 ~RSI~~~iP-----i~A~id~~~L~I~F~~ 46 (108)
T 3d33_A 22 IRSAATNCP-----ITVFTDGYLLTLKNAS 46 (108)
T ss_dssp ------CCS-----EEEEEETTEEEEEESS
T ss_pred ccccCCCCC-----cEEEEECCEEEEEECC
Confidence 677764322 4688888999999965
No 50
>1nh2_C Transcription initiation factor IIA large chain; transcription/DNA; HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP: b.56.1.1 PDB: 1ytf_C*
Probab=29.64 E-value=24 Score=21.51 Aligned_cols=16 Identities=38% Similarity=0.488 Sum_probs=12.7
Q ss_pred cCCceEEEeCCEEEEE
Q 041378 110 LEEVKAIYKDGVLTVT 125 (145)
Q Consensus 110 ~~~i~A~~~~GvL~I~ 125 (145)
..+-++.|++||++|.
T Consensus 48 KnKWKc~LKdGi~~in 63 (79)
T 1nh2_C 48 KARWKCSLKDGVVTIN 63 (79)
T ss_dssp TTEEEEEEEEEEEEET
T ss_pred cceEEEEEeeeEEEEC
Confidence 4457899999999873
No 51
>4i95_A Putative uncharacterized protein; lipocalin-like domain of PF13924 family, structural genomics center for structural genomics, JCSG; HET: MSE; 1.81A {Bacteroides eggerthii} PDB: 4gzv_A
Probab=28.01 E-value=1.4e+02 Score=20.09 Aligned_cols=75 Identities=15% Similarity=0.153 Sum_probs=47.7
Q ss_pred cccCC--cceEEEcCCeEEEEEECCCCCCcceeEEecccccccCcceEEEEeeecceEEEEEECCCCCccCC-ceEEE-e
Q 041378 43 AILRT--PADIYEDPSHYSFILDMPGLEASNIKKKKGQSAENEGAVKAIRIERRRARNMRKFTLPQDSNLEE-VKAIY-K 118 (145)
Q Consensus 43 ~~~~p--~~~v~e~~~~~~i~~~lpG~~~e~i~V~~~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~-i~A~~-~ 118 (145)
....| .+.|..+++.+...+=.|| ...|-. .........+..|. ....+++.||.-...++ ++.++ .
T Consensus 30 g~L~psn~lKIlSdDgtF~Ni~m~~~--~~aiIt-~~GtY~~~SD~~Y~------E~IeKni~lp~l~g~~N~l~fE~~~ 100 (142)
T 4i95_A 30 GVLKPSNTFKVLSDDGRIVNFTIRPG--TDAIIT-GYGTYRQISAAAYK------ESIEKNIHLPMLDNKDNILEFEMGA 100 (142)
T ss_dssp CEEEEEEEEEEECTTSEEEEEECCTT--SCCEEE-EEEEEEEEETTEEE------EEEEEESSSGGGTTEEEEEEEEECS
T ss_pred eEeccCccEEEEcCCCcEEEEEEecC--CCcEEE-EeEEEEecCCccee------eeecccccCcccCCCccEEEEEEcc
Confidence 34555 7788888887766665564 233333 22221122233433 35788899998887766 88888 6
Q ss_pred CCEEEEEE
Q 041378 119 DGVLTVTV 126 (145)
Q Consensus 119 ~GvL~I~~ 126 (145)
||+|.|..
T Consensus 101 dnlm~lky 108 (142)
T 4i95_A 101 GGVMYLKY 108 (142)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEE
Confidence 89999998
No 52
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=25.90 E-value=1.4e+02 Score=19.24 Aligned_cols=33 Identities=12% Similarity=-0.063 Sum_probs=28.2
Q ss_pred cceEEEEEECCCC--CccCCceEEEeCCEEEEEEe
Q 041378 95 RARNMRKFTLPQD--SNLEEVKAIYKDGVLTVTVA 127 (145)
Q Consensus 95 ~~~f~r~i~LP~~--vd~~~i~A~~~~GvL~I~~p 127 (145)
.....-.|.||.+ +..+.+++.+...-|.|.+.
T Consensus 16 ~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k 50 (131)
T 1wfi_A 16 LAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK 50 (131)
T ss_dssp SSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET
T ss_pred CCEEEEEEECCCCCcccccceEEEEeCCEEEEEEC
Confidence 4456778999987 89999999999999999983
No 53
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=24.24 E-value=1.6e+02 Score=19.59 Aligned_cols=30 Identities=20% Similarity=0.527 Sum_probs=18.9
Q ss_pred CCceEEE---eCCEEEEEEeCcCCCCCCCCeeEEec
Q 041378 111 EEVKAIY---KDGVLTVTVAKKVPEVSRRPKTVTIP 143 (145)
Q Consensus 111 ~~i~A~~---~~GvL~I~~pK~~~~~~~~~~~I~I~ 143 (145)
-+|+.+| .||+|.|+.--+ ...+...|.|.
T Consensus 81 ~~IeVtf~iD~nGiL~Vsa~d~---~tg~~~~i~I~ 113 (152)
T 3dob_A 81 PQIEVTFNIDANGILNVSAEDK---STGKSNRITIQ 113 (152)
T ss_dssp CCEEEEEEECTTCCEEEEEEET---TTCCEEEEEEC
T ss_pred ceEEEEEEeCCCCeEEEEEEEc---CCCCEEEEEEE
Confidence 3466665 399999998542 23345566664
No 54
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=23.70 E-value=1.7e+02 Score=19.49 Aligned_cols=30 Identities=20% Similarity=0.531 Sum_probs=18.9
Q ss_pred CCceEEE---eCCEEEEEEeCcCCCCCCCCeeEEec
Q 041378 111 EEVKAIY---KDGVLTVTVAKKVPEVSRRPKTVTIP 143 (145)
Q Consensus 111 ~~i~A~~---~~GvL~I~~pK~~~~~~~~~~~I~I~ 143 (145)
-+|+.+| .||+|.|+.--+ ...+...|.|.
T Consensus 81 ~~I~Vtf~iD~nGiL~V~a~d~---~tg~~~~i~I~ 113 (152)
T 3h0x_A 81 PQIEVTFALDANGILKVSATDK---GTGKSESITIT 113 (152)
T ss_dssp SCEEEEEEECTTSEEEEEEEET---TTCCEEEEEEE
T ss_pred ceEEEEEEEcCCCEEEEEEEEc---CCCcEeEEEEe
Confidence 3466665 399999998642 23344566664
No 55
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=23.50 E-value=1.7e+02 Score=19.49 Aligned_cols=30 Identities=13% Similarity=0.441 Sum_probs=19.0
Q ss_pred CCceEEE---eCCEEEEEEeCcCCCCCCCCeeEEec
Q 041378 111 EEVKAIY---KDGVLTVTVAKKVPEVSRRPKTVTIP 143 (145)
Q Consensus 111 ~~i~A~~---~~GvL~I~~pK~~~~~~~~~~~I~I~ 143 (145)
-.|+.+| .||+|.|+.--+ ...+...|.|.
T Consensus 81 ~~IeVtf~iD~nGiL~Vsa~d~---~tg~~~~i~I~ 113 (151)
T 3dqg_A 81 PQVEVTFDIDANGIVNVSARDR---GTGKEQQIVIQ 113 (151)
T ss_dssp SCEEEEEEECTTSEEEEEEEET---TTCCEEEEEEE
T ss_pred cEEEEEEEeccCcEEEEEEEEc---cCCCEeEEEEe
Confidence 3466665 399999998642 23345666664
No 56
>2fsd_A RBP, putative baseplate protein; lactococcus lactis, receptor binding protein, head domain, viral protein; 2.30A {Unidentified phage}
Probab=22.68 E-value=1.4e+02 Score=19.41 Aligned_cols=36 Identities=14% Similarity=0.009 Sum_probs=23.0
Q ss_pred CCccCC-ceEEEeCCEEEEEEeCcCCCCCCCCeeEEe
Q 041378 107 DSNLEE-VKAIYKDGVLTVTVAKKVPEVSRRPKTVTI 142 (145)
Q Consensus 107 ~vd~~~-i~A~~~~GvL~I~~pK~~~~~~~~~~~I~I 142 (145)
+|-... ++|+..||++.+.-.-...+.-+....|+|
T Consensus 44 GVGssG~L~ARI~NGV~Y~~~~~i~iP~iAPN~~i~i 80 (142)
T 2fsd_A 44 GVGSTGILQARIINGVIYVRGNSIPVPNVAPNFIVPV 80 (142)
T ss_dssp TCCSSSEEEEEEETTEEEEEEEEEECCCBCTTCEEEE
T ss_pred ccCccceeeeeEeccEEEEecCCcccCccCCCceEEc
Confidence 454444 899999999987654333344445566666
No 57
>4gzv_A Hypothetical protein; AN eight-stranded beta barrel, lipocalin family, structural joint center for structural genomics, JCSG; 1.95A {Bacteroides ovatus}
Probab=21.33 E-value=1.9e+02 Score=19.42 Aligned_cols=74 Identities=11% Similarity=0.051 Sum_probs=47.5
Q ss_pred ccCCcceEEEcCCeEEEEEECCCCCCcceeEEecccccccCcceEEEEeeecceEEEEEECCCCCccCC-ceEEE-eCCE
Q 041378 44 ILRTPADIYEDPSHYSFILDMPGLEASNIKKKKGQSAENEGAVKAIRIERRRARNMRKFTLPQDSNLEE-VKAIY-KDGV 121 (145)
Q Consensus 44 ~~~p~~~v~e~~~~~~i~~~lpG~~~e~i~V~~~~~~~~~~~~~~~~~e~~~~~f~r~i~LP~~vd~~~-i~A~~-~~Gv 121 (145)
...|.+.|..+++.|.--+=.|+- ..| |......+...+..|. ....+++.+|.-...++ ++-++ +|++
T Consensus 33 ~~s~~~KIlS~DgtF~N~~m~~~~--~ai-It~yGtY~l~SD~~Y~------E~i~kni~~p~~~g~~n~L~fe~~~dn~ 103 (142)
T 4gzv_A 33 KPSNTFKVLSDDGRIVNFTIIPGA--DAI-ITGYGTYKQLTDDSYK------ESIEKNIHLPMLDNQDNILEFEIKDNDY 103 (142)
T ss_dssp EEEEEEEEECTTSEEEEEECCTTS--CCE-EEEEEEEEEEETTEEE------EEEEEESSSGGGTTEEEEEEEEEETTTE
T ss_pred eecCceEEECCCCcEEEEEEeCCC--CcE-EEEeEEEEecCCCeee------eeecccccCccccCCccEEEEEEccCCE
Confidence 345677888888877544435643 223 3333332233334443 35788999999887776 88888 6899
Q ss_pred EEEEE
Q 041378 122 LTVTV 126 (145)
Q Consensus 122 L~I~~ 126 (145)
|.|..
T Consensus 104 l~lsy 108 (142)
T 4gzv_A 104 LHLKY 108 (142)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99988
No 58
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=20.88 E-value=1.7e+02 Score=19.26 Aligned_cols=30 Identities=17% Similarity=0.411 Sum_probs=18.4
Q ss_pred CCceEEE---eCCEEEEEEeCcCCCCCCCCeeEEec
Q 041378 111 EEVKAIY---KDGVLTVTVAKKVPEVSRRPKTVTIP 143 (145)
Q Consensus 111 ~~i~A~~---~~GvL~I~~pK~~~~~~~~~~~I~I~ 143 (145)
..|..+| .||+|.|++-- ....+...|.|+
T Consensus 81 ~~I~V~f~id~nGiL~V~a~d---~~tg~~~~i~i~ 113 (152)
T 2op6_A 81 PQIEVTFEIDVNGILHVSAED---KGTGNKNKLTIT 113 (152)
T ss_dssp SCEEEEEEECTTSCEEEEEEE---TTTCCEEEEEEC
T ss_pred ceEEEEEEECCCcEEEEEEEE---ecCCcEEEEEee
Confidence 3566665 49999999853 122344566654
No 59
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=20.64 E-value=1.9e+02 Score=20.47 Aligned_cols=30 Identities=27% Similarity=0.533 Sum_probs=18.9
Q ss_pred CCceEEE---eCCEEEEEEeCcCCCCCCCCeeEEec
Q 041378 111 EEVKAIY---KDGVLTVTVAKKVPEVSRRPKTVTIP 143 (145)
Q Consensus 111 ~~i~A~~---~~GvL~I~~pK~~~~~~~~~~~I~I~ 143 (145)
-.|..+| .||+|.|+.--+ ...+...|.|+
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~---~tg~~~~i~I~ 114 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDK---NSGKEQKITIK 114 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEET---TTCCEEEEEEC
T ss_pred ceEEEEEEeCCCCCEeeeeecc---ccCccceEeee
Confidence 4566666 399999998642 23344566664
No 60
>1eal_A Gastrotropin, ileal lipid binding protein; intracellular lipid binding protein, bIle acid binding, ileal epithelium, fatty acid binding protein; NMR {Sus scrofa} SCOP: b.60.1.2 PDB: 1eio_A* 1o1u_A 1o1v_A*
Probab=20.45 E-value=1.2e+02 Score=19.68 Aligned_cols=98 Identities=15% Similarity=0.149 Sum_probs=52.9
Q ss_pred HHHHHHhhcCCccccccccccccCCcceEEEcCCeEEEEEECCCCCCcceeEEeccccc--ccCcceEEEE-eeecceEE
Q 041378 23 PEEMEKMLQQPGRRYVKNARAILRTPADIYEDPSHYSFILDMPGLEASNIKKKKGQSAE--NEGAVKAIRI-ERRRARNM 99 (145)
Q Consensus 23 ~~e~~~~~~~~~~~~~~~~~~~~~p~~~v~e~~~~~~i~~~lpG~~~e~i~V~~~~~~~--~~~~~~~~~~-e~~~~~f~ 99 (145)
|+++.+.++-+.. .........|.+.|..++|.|.+.....+++.-.++....++-+ ..++...... ....+...
T Consensus 14 fdeymkalGv~~~--~rk~a~~~kp~~ei~~~Gd~~~ikt~~s~~k~~~~~F~lGeEfee~t~dgrk~ks~vt~eg~kLv 91 (127)
T 1eal_A 14 YDEFMKRLALPSD--AIDKARNLKIISEVKQDGQNFTWSQQYPGGHSITNTFTIGKECDIETIGGKKFKATVQMEGGKVV 91 (127)
T ss_dssp TTHHHHHHTCCHH--HHHHHTTCCEEEEEEESSSEEEEEEECSSSCEEEEEEESSSCEEEECSSSCEEEECCEECSSEEE
T ss_pred HHHHHHHhCCCHH--HHHhhhcCCcEEEEEEcCCEEEEEEEECCCceEEEEEECCCcEEEECCCCCEEEEEEEEECCEEE
Confidence 5566665554431 11222456789999999999999988566766666665443311 1112211111 11112222
Q ss_pred EEEECCCCCccCCceEEEeCCEEEEEEeC
Q 041378 100 RKFTLPQDSNLEEVKAIYKDGVLTVTVAK 128 (145)
Q Consensus 100 r~i~LP~~vd~~~i~A~~~~GvL~I~~pK 128 (145)
. ... ...+.-.+.+|-|.+++--
T Consensus 92 ~---~g~---~~~~~re~~g~~l~~t~t~ 114 (127)
T 1eal_A 92 V---NSP---NYHHTAEIVDGKLVEVSTV 114 (127)
T ss_dssp E---CCT---TCEEEEEEETTEEEEEEEE
T ss_pred E---ECC---CcEEEEEEECCEEEEEEEE
Confidence 2 211 1345566789988887753
No 61
>1s21_A ORF2; predominantly beta-strand, chaperone; 2.00A {Pseudomonas syringae PV} SCOP: d.166.1.4
Probab=20.04 E-value=44 Score=23.96 Aligned_cols=25 Identities=24% Similarity=0.393 Sum_probs=13.9
Q ss_pred CceEEEeC----CEEEEEEeCcCCCCCCCCeeEEecc
Q 041378 112 EVKAIYKD----GVLTVTVAKKVPEVSRRPKTVTIPV 144 (145)
Q Consensus 112 ~i~A~~~~----GvL~I~~pK~~~~~~~~~~~I~I~v 144 (145)
.++|.+++ -.|.|+||+ .++|++++
T Consensus 176 D~Sas~~~~d~~~~LIVTLP~--------g~kVpv~I 204 (206)
T 1s21_A 176 DTSAMSAGGDSVEALIVTLPK--------GRKVPVNI 204 (206)
T ss_dssp BC-----CCSSCEEEEEECCT--------TCEEECEE
T ss_pred cchhhhcCCCCCceEEEECCC--------Ccccceee
Confidence 35777775 599999997 35666653
Done!