Your job contains 1 sequence.
>041382
MGSAFSVVASVAILRSTFNEMIPDEVRGYIWSITRRFSTEITMIIKESHDGSTNRLFKAV
VTYLDGHALSNSVLPKRLTVGKNENVRNFTYGLERNSEIVDVFQGVTMKWKFNSDINSTS
HFETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHTIRHDRWSSSGVNLDH
PMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMA
NYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSY
RGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFST
FKQLAANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELMKAKGSKTSLEDFITYLESKES
QEEKSSTAPPLASNVDGNRPEPQENGNNISKSGVQDQSSHTETEAADMGNVGGYSVKAEF
ANIIKAIFSKHGDIAANSCLQSKQCRSSLLEIVCRIIQKLQKAKLKDLKETELKSMLSEL
QDLESMRLEVGWLRKRLDEIVEAMRLFELIAVSEKLSDTIFSTEVKLNCIYNKSLVEGLI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041382
(600 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2078007 - symbol:AT3G50940 species:3702 "Arabi... 879 5.3e-88 1
TAIR|locus:2175986 - symbol:AT5G17760 species:3702 "Arabi... 772 8.1e-87 2
TAIR|locus:2053109 - symbol:AT2G18190 species:3702 "Arabi... 834 3.1e-83 1
TAIR|locus:1005716649 - symbol:AT2G18193 species:3702 "Ar... 820 9.4e-82 1
TAIR|locus:2077997 - symbol:BCS1 "cytochrome BC1 synthesi... 807 2.2e-80 1
TAIR|locus:2175946 - symbol:AT5G17730 species:3702 "Arabi... 803 6.0e-80 1
TAIR|locus:2098648 - symbol:AT3G28540 species:3702 "Arabi... 482 4.6e-78 2
TAIR|locus:2175956 - symbol:AT5G17740 species:3702 "Arabi... 754 9.3e-75 1
TAIR|locus:2098658 - symbol:AT3G28510 species:3702 "Arabi... 752 1.5e-74 1
TAIR|locus:2095537 - symbol:AT3G28610 species:3702 "Arabi... 743 1.4e-73 1
TAIR|locus:2095512 - symbol:AT3G28580 species:3702 "Arabi... 464 4.1e-73 2
TAIR|locus:2095532 - symbol:AT3G28600 species:3702 "Arabi... 735 9.6e-73 1
TAIR|locus:2174502 - symbol:AT5G57480 species:3702 "Arabi... 484 9.7e-72 2
TAIR|locus:2178057 - symbol:AT5G40000 species:3702 "Arabi... 723 1.8e-71 1
TAIR|locus:2037186 - symbol:AT1G43910 species:3702 "Arabi... 722 2.3e-71 1
TAIR|locus:2098638 - symbol:AT3G28520 species:3702 "Arabi... 717 7.7e-71 1
TAIR|locus:2095502 - symbol:AT3G28570 species:3702 "Arabi... 699 6.3e-69 1
TAIR|locus:2178067 - symbol:AATP1 "AAA-ATPase 1" species:... 696 1.3e-68 1
TAIR|locus:505006520 - symbol:AT4G25835 species:3702 "Ara... 691 4.4e-68 1
TAIR|locus:2175976 - symbol:AT5G17750 species:3702 "Arabi... 688 9.2e-68 1
TAIR|locus:2128916 - symbol:AT4G30250 species:3702 "Arabi... 639 1.4e-62 1
TAIR|locus:2115954 - symbol:AT4G05380 species:3702 "Arabi... 600 1.9e-58 1
TAIR|locus:2039981 - symbol:AT2G46620 species:3702 "Arabi... 585 7.5e-57 1
TAIR|locus:2086591 - symbol:AT3G29800 species:3702 "Arabi... 501 6.0e-48 1
CGD|CAL0005742 - symbol:orf19.458 species:5476 "Candida a... 362 8.3e-33 1
WB|WBGene00010042 - symbol:bcs-1 species:6239 "Caenorhabd... 354 6.6e-32 1
ASPGD|ASPL0000041452 - symbol:AN3131 species:162425 "Emer... 342 4.7e-29 1
DICTYBASE|DDB_G0289135 - symbol:bcs1lA "mitochondrial cha... 324 1.4e-28 1
FB|FBgn0032195 - symbol:CG4908 species:7227 "Drosophila m... 322 2.3e-28 1
MGI|MGI:1914071 - symbol:Bcs1l "BCS1-like (yeast)" specie... 313 2.3e-27 1
UNIPROTKB|E2RE50 - symbol:BCS1L "Uncharacterized protein"... 310 4.9e-27 1
SGD|S000002783 - symbol:BCS1 "Protein translocase and cha... 319 1.2e-26 1
DICTYBASE|DDB_G0286765 - symbol:DDB_G0286765 "BCS1-like p... 324 1.9e-26 1
ZFIN|ZDB-GENE-040426-938 - symbol:bcs1l "BCS1-like (yeast... 307 3.1e-26 1
DICTYBASE|DDB_G0291910 - symbol:bcs1lB "mitochondrial cha... 222 4.8e-26 2
RGD|1359658 - symbol:Bcs1l "BC1 (ubiquinol-cytochrome c r... 305 6.9e-26 1
POMBASE|SPAC644.07 - symbol:SPAC644.07 "mitochondrial Rie... 312 7.7e-26 1
UNIPROTKB|F1P1Q6 - symbol:BCS1L "Uncharacterized protein"... 305 8.6e-26 1
UNIPROTKB|Q9Y276 - symbol:BCS1L "Mitochondrial chaperone ... 305 8.6e-26 1
UNIPROTKB|G4MYI1 - symbol:MGG_10383 "Mitochondrial chaper... 312 2.1e-25 1
UNIPROTKB|I3LFK0 - symbol:BCS1L "Uncharacterized protein"... 301 4.7e-25 1
UNIPROTKB|E1BWG5 - symbol:BCS1L "Uncharacterized protein"... 301 5.2e-25 1
GENEDB_PFALCIPARUM|PFF0155w - symbol:PFF0155w "bcs1-like ... 300 6.2e-25 2
UNIPROTKB|C6KSN2 - symbol:PFF0155w "Bcs1 protein, putativ... 300 6.2e-25 2
UNIPROTKB|Q5E9H5 - symbol:BCS1L "Mitochondrial chaperone ... 300 7.3e-25 1
ASPGD|ASPL0000063397 - symbol:AN7549 species:162425 "Emer... 204 2.4e-23 2
UNIPROTKB|G4MXF6 - symbol:MGG_15496 "Uncharacterized prot... 263 2.1e-19 1
UNIPROTKB|G4MN83 - symbol:MGG_02058 "Mitochondrial chaper... 179 1.4e-15 3
UNIPROTKB|G4NGV5 - symbol:MGG_04018 "Mitochondrial chaper... 172 1.4e-15 3
UNIPROTKB|H7BZF6 - symbol:BCS1L "Mitochondrial chaperone ... 199 5.6e-15 1
TAIR|locus:2115914 - symbol:AT4G05340 species:3702 "Arabi... 194 1.9e-14 1
TAIR|locus:2147937 - symbol:AT5G11140 "AT5G11140" species... 192 3.2e-14 1
UNIPROTKB|H7C492 - symbol:BCS1L "Mitochondrial chaperone ... 182 3.8e-13 1
TAIR|locus:2039435 - symbol:AT2G16900 "AT2G16900" species... 184 3.7e-11 2
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 179 1.6e-10 1
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 179 1.6e-10 1
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 179 1.6e-10 1
TAIR|locus:2131611 - symbol:AT4G35110 "AT4G35110" species... 180 1.8e-10 2
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 176 2.1e-10 1
TAIR|locus:2079742 - symbol:RPT5A "regulatory particle tr... 176 3.1e-10 1
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 175 3.3e-10 1
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 175 3.3e-10 1
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 176 3.4e-10 1
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 176 3.4e-10 1
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 176 3.4e-10 1
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 176 3.4e-10 1
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 176 3.4e-10 1
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 176 3.4e-10 1
TAIR|locus:2095467 - symbol:AT3G28560 "AT3G28560" species... 168 3.5e-10 1
UNIPROTKB|C9J1S9 - symbol:BCS1L "Mitochondrial chaperone ... 153 5.0e-10 1
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 173 5.6e-10 1
TAIR|locus:2036099 - symbol:RPT5B "26S proteasome AAA-ATP... 173 6.6e-10 1
ASPGD|ASPL0000007908 - symbol:AN6397 species:162425 "Emer... 174 7.8e-10 1
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 172 9.2e-10 1
GENEDB_PFALCIPARUM|PFD0665c - symbol:PFD0665c "26s protea... 170 1.2e-09 1
UNIPROTKB|Q8I1V1 - symbol:PFD0665c "26S proteasome AAA-AT... 170 1.2e-09 1
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 170 1.6e-09 1
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 170 1.6e-09 1
GENEDB_PFALCIPARUM|PF11_0314 - symbol:PF11_0314 "26S prot... 168 2.6e-09 1
UNIPROTKB|Q8II60 - symbol:PF11_0314 "26S protease subunit... 168 2.6e-09 1
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 165 4.7e-09 1
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 165 4.7e-09 1
TAIR|locus:2047122 - symbol:pEARLI4 "AT2G20960" species:3... 169 4.9e-09 1
ASPGD|ASPL0000036562 - symbol:AN2904 species:162425 "Emer... 165 5.1e-09 1
WB|WBGene00015688 - symbol:C10G11.8 species:6239 "Caenorh... 165 5.5e-09 1
ZFIN|ZDB-GENE-030131-8730 - symbol:psmc1a "proteasome (pr... 165 5.5e-09 1
ZFIN|ZDB-GENE-040625-69 - symbol:psmc1b "proteasome (pros... 165 5.5e-09 1
CGD|CAL0001552 - symbol:PR26 species:5476 "Candida albica... 164 6.2e-09 1
UNIPROTKB|Q5A0L8 - symbol:PR26 "Likely 26S proteasome reg... 164 6.2e-09 1
CGD|CAL0005827 - symbol:RPT4 species:5476 "Candida albica... 164 6.7e-09 1
TAIR|locus:2161258 - symbol:RPT3 "regulatory particle tri... 163 7.9e-09 1
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 162 9.5e-09 1
ASPGD|ASPL0000010049 - symbol:AN4236 species:162425 "Emer... 163 1.0e-08 1
DICTYBASE|DDB_G0270784 - symbol:psmC1 "TAT binding protei... 162 1.2e-08 1
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 161 1.3e-08 1
TAIR|locus:2121169 - symbol:AT4G38560 "AT4G38560" species... 163 1.3e-08 1
RGD|1308825 - symbol:Psmc6 "proteasome (prosome, macropai... 159 1.9e-08 1
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 159 1.9e-08 1
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 159 2.0e-08 1
UNIPROTKB|F1MLV1 - symbol:PSMC6 "26S protease regulatory ... 159 2.0e-08 1
WARNING: Descriptions of 253 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2078007 [details] [associations]
symbol:AT3G50940 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363 EMBL:BT026134
IPI:IPI00532009 RefSeq:NP_190663.2 UniGene:At.35440
ProteinModelPortal:Q147F9 SMR:Q147F9 PaxDb:Q147F9 PRIDE:Q147F9
EnsemblPlants:AT3G50940.1 GeneID:824258 KEGG:ath:AT3G50940
TAIR:At3g50940 HOGENOM:HOG000237995 InParanoid:Q147F9 OMA:DCSIELK
PhylomeDB:Q147F9 ProtClustDB:CLSN2680378 Genevestigator:Q147F9
Uniprot:Q147F9
Length = 451
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 190/431 (44%), Positives = 279/431 (64%)
Query: 3 SAFSVVASVAIL-RSTFNEMIPDEVRGYIWSITRRF----STEITMIIKESHDGSTNRLF 57
+A + VA+ AIL RS + +P+EV YI RRF S ++T +I+E N++F
Sbjct: 17 TAVASVAAAAILARSVVQDYMPNEVHEYISHGFRRFFSYFSYQMTAVIEEFGGFEHNQVF 76
Query: 58 KAVVTYLDGHALSNSVLPKRLTVGKNENVRNFTYGLERNSEIVDVFQGVTMKW------- 110
+A YL +SNS +R+ V K E N++ +ER+ E+VD+F GV + W
Sbjct: 77 EAAEAYLSTK-ISNST--RRIKVNKLEKQSNYSVTVERDEEVVDIFDGVKLSWILVCRHV 133
Query: 111 ---KFNS--DINSTSHFETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHT 165
F + D+NST E R YEL F K +V + YL V+E A K + + ++ T
Sbjct: 134 DKKDFRNPRDLNSTLKSEVRSYELSFRKKFKNMVLESYLPFVVEQAASIKQKFKTLKIFT 193
Query: 166 IRHDRWSSSGVNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLY 225
+ + V LDHP TF TL +D ++K+ ++ DLD F + K +Y ++GK WKRGYLLY
Sbjct: 194 VDSYSVEWTSVTLDHPSTFRTLALDPEVKKNLVEDLDRFVQRKGFYGRVGKAWKRGYLLY 253
Query: 226 GPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKL 285
GPPGTGKSSLIAA+AN++N+DIY+L+L+ + +++ L LL+ NRSILVVEDIDCSI+L
Sbjct: 254 GPPGTGKSSLIAAIANHLNFDIYDLDLTSLNNNAELRRLLMSTANRSILVVEDIDCSIEL 313
Query: 286 QNRES-QKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRA 344
++R + Q+ ++P VTL+GLLN +DGL CG+E+I VFTTNY++++DPALLR
Sbjct: 314 KDRSTDQENNDPLHK----TVTLSGLLNFVDGLWSSCGNERIIVFTTNYREKLDPALLRP 369
Query: 345 GRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELMKAKGS 404
GRMD HI++SYCT + FK LA+NYL+I DH L+ IE+ + +++V+PAEVA +LM++
Sbjct: 370 GRMDMHIHMSYCTPAAFKVLASNYLEIQDHILFEQIEEFIREIEVTPAEVAEQLMRSDSV 429
Query: 405 KTSLEDFITYL 415
L+ + +L
Sbjct: 430 DKVLQGLVEFL 440
>TAIR|locus:2175986 [details] [associations]
symbol:AT5G17760 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 EMBL:CP002688 HSSP:Q01853 GO:GO:0017111
EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00548078 RefSeq:NP_850841.1 UniGene:At.23914
ProteinModelPortal:Q9FN75 SMR:Q9FN75 PRIDE:Q9FN75
EnsemblPlants:AT5G17760.1 GeneID:831644 KEGG:ath:AT5G17760
TAIR:At5g17760 InParanoid:Q9FN75 OMA:KQHDVQL PhylomeDB:Q9FN75
ProtClustDB:CLSN2686349 Genevestigator:Q9FN75 Uniprot:Q9FN75
Length = 505
Score = 772 (276.8 bits), Expect = 8.1e-87, Sum P(2) = 8.1e-87
Identities = 152/299 (50%), Positives = 209/299 (69%)
Query: 123 ETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHTIRHDRWSSSGVNLDHPM 182
++ ++EL F K H +L+ Y+ ++ AK +D RI+ H++ RW S V L+HP
Sbjct: 159 KSEYFELSFDKKHKDLILNSYVPYIESKAKEIRDERRILMLHSLNSLRWES--VILEHPS 216
Query: 183 TFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANY 242
TF T+ M+ DLK V+ DLD F R KE+Y+++GK WKRGYLLYGPPGTGKSSL+AAMANY
Sbjct: 217 TFETMAMEDDLKRDVIEDLDRFIRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANY 276
Query: 243 MNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQ--KGDEPADSY 300
+ +D+Y+L L+ V DS L LLL NRSILV+EDIDC++ L NR Q +G +S
Sbjct: 277 LKFDVYDLQLASVMRDSDLRRLLLATRNRSILVIEDIDCAVDLPNRIEQPVEGKNRGES- 335
Query: 301 RGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFST 360
+GP +TL+GLLN IDGL CGDE+I +FTTN+KDR+DPALLR GRMD HI + +C+F
Sbjct: 336 QGP-LTLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPALLRPGRMDMHIYMGHCSFQG 394
Query: 361 FKQLAANYLDIND----HDLYCHIEKLMEKVKVSPAEVAGELMKAKGSKTSLEDFITYL 415
FK LA+NYL ++D H L+ IE+L++ ++PA+VA ELMK++ + +LE + L
Sbjct: 395 FKTLASNYLGLSDAAMPHRLFPEIERLIDGEVMTPAQVAEELMKSEDADVALEGLVNVL 453
Score = 115 (45.5 bits), Expect = 8.1e-87, Sum P(2) = 8.1e-87
Identities = 35/123 (28%), Positives = 64/123 (52%)
Query: 3 SAFSVVASVA----ILRSTFNEMIPDEVRGYIWSITRRF-----STEITMIIKESHDGST 53
S F+ AS+A ++RS +E+IP ++ +I+ R S+ +T+ I + + G
Sbjct: 12 SVFTAYASMAGYMMMIRSMAHELIPAPLQDFIYRTLRSLFFRSSSSTLTLTIDDDNMGMN 71
Query: 54 NRLFKAVVTYLDGHALSNSVLPKRLTVGKNENVRNFTYGLERNSEIV-DVFQGVTMKWKF 112
N +++A TYL ++V RL + K ++ L + EIV DV++ V + W+F
Sbjct: 72 NEIYRAAQTYLSTKISPDAV---RLRISKGHKDKHVNLYLS-DGEIVNDVYEDVQLVWRF 127
Query: 113 NSD 115
+D
Sbjct: 128 VTD 130
>TAIR|locus:2053109 [details] [associations]
symbol:AT2G18190 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI01020552 RefSeq:NP_179411.2 UniGene:At.66217
ProteinModelPortal:F4IQG2 SMR:F4IQG2 EnsemblPlants:AT2G18190.1
GeneID:816332 KEGG:ath:AT2G18190 OMA:TRINTDM ArrayExpress:F4IQG2
Uniprot:F4IQG2
Length = 494
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 179/428 (41%), Positives = 267/428 (62%)
Query: 6 SVVASVAILRSTFNEMIPDEVRGYIWSITRRFST----EITMIIKESHDGSTNRLFKAVV 61
S+ + + RS FN+ +P+ +R YI + RF T +TM+I E N++F A
Sbjct: 21 SLTGFLMLFRSLFNDEVPERLRSYITDLLNRFFTPKSKNLTMVIDEIIGFKRNQVFDAAE 80
Query: 62 TYLDGHALSNSVLPK--RLTVGKNENVRNFTYGLERNSEIVDVFQGVTMKWKFNSDINST 119
YL N + P+ RL VGK ++FT +E+ EI+D F+ ++W + N
Sbjct: 81 VYL-----RNKIGPETARLRVGKLPKQKHFTIYIEKGEEILDTFENSELRWTYVESENEA 135
Query: 120 SHFETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHT--IR----HDRWSS 173
S E R+YEL F K + V YL HV+ ++ K R V+ ++ +R D +
Sbjct: 136 SQKEKRYYELTFEKKLRDKVMNSYLSHVVAESEETKRDLRAVKLYSRDVRASKDDDGMAG 195
Query: 174 SG---VNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGT 230
+G +NL+HP TF TL MD K+ +++D++ F + +E+Y+++GK WKRGYLLYGPPGT
Sbjct: 196 AGWGCINLEHPSTFETLAMDPGAKKKIIDDMERFLKRREFYKRVGKAWKRGYLLYGPPGT 255
Query: 231 GKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCS-IKLQNRE 289
GKSSLIAAMANY+ +D+++L LS + ++ L+ +LL NRSILV+EDIDCS ++ +RE
Sbjct: 256 GKSSLIAAMANYLKFDVFDLELSSIYENAQLKSILLSTTNRSILVIEDIDCSSAEVVDRE 315
Query: 290 SQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDR 349
+ + E + Y G +VTL+GLLN +DGL GDE+I VFTTN+K+R+DPALLR GRMD
Sbjct: 316 ADEYQEYEEGYYG-RVTLSGLLNFVDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDM 374
Query: 350 HINLSYCTFSTFKQLAANYLDIN--DHDLYCHIEKLMEKVKVSPAEVAGELMKAKGSKTS 407
HIN+SYCT F+ L +NYL + +H L IE L++ +V+PAE+A ELM+ +
Sbjct: 375 HINMSYCTGLGFRTLVSNYLGLGGLNHPLCEEIEALIDSTEVTPAELAEELMQEDDTDVV 434
Query: 408 LEDFITYL 415
L ++++
Sbjct: 435 LRGVVSFV 442
>TAIR|locus:1005716649 [details] [associations]
symbol:AT2G18193 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 EMBL:BT026385 EMBL:AK118992
EMBL:AK175187 EMBL:AK175325 EMBL:AK176580 IPI:IPI00520678
RefSeq:NP_849972.1 UniGene:At.40029 ProteinModelPortal:Q8GW96
SMR:Q8GW96 PRIDE:Q8GW96 EnsemblPlants:AT2G18193.1 GeneID:816333
KEGG:ath:AT2G18193 TAIR:At2g18193 InParanoid:Q8GW96 OMA:IRSMANE
PhylomeDB:Q8GW96 ProtClustDB:CLSN2690765 Genevestigator:Q8GW96
Uniprot:Q8GW96
Length = 495
Score = 820 (293.7 bits), Expect = 9.4e-82, P = 9.4e-82
Identities = 178/432 (41%), Positives = 269/432 (62%)
Query: 3 SAFSVVASVA----ILRSTFNEMIPDEVRGYIWSITRRFSTE----ITMIIKESHDGSTN 54
S FS AS+ + RS ++ +P+++R Y S+ RF T +T+II E+ + N
Sbjct: 13 SLFSAYASLTGFLMLFRSMLHDFVPEKLRSYFSSLLDRFFTPKSKYLTVIIDENFGLNRN 72
Query: 55 RLFKAVVTYLDGHALSNSVLPKRLTVGKNENVRNFTYGLERNSEIVDVFQGVTMKWKFNS 114
++F A YL + +RL VGK ++FT +ER EI+D F+ +KW +
Sbjct: 73 QVFDAAEMYLRSKIGPET---ERLRVGKIPKQKHFTISIERGEEILDTFEESEVKWSYVQ 129
Query: 115 DINSTSHFETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHT-----IRHD 169
N R+YEL F K + V YL HV+ ++ K R+V+ ++ D
Sbjct: 130 SENEKGDKVKRYYELTFEKKLRDKVLNSYLTHVVAESEEIKRNLRVVKLYSRDVYASDDD 189
Query: 170 RWSSSG----VNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLY 225
+ G +NL+HP TF TL MD + K+ +++DL+ F + KE+Y+++GK WKRGYLLY
Sbjct: 190 DGMAGGNWGCINLEHPSTFDTLAMDPNAKKKIIDDLERFLKRKEFYKRVGKAWKRGYLLY 249
Query: 226 GPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKL 285
GPPGTGKSSLIAAMANY+ +D+++L LS + + L+ +LL NRSILV+EDIDC+ ++
Sbjct: 250 GPPGTGKSSLIAAMANYLKFDVFDLELSSIYDNGELKRVLLSTTNRSILVIEDIDCNAEV 309
Query: 286 QNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAG 345
++RE++ ++ + +G +VTL+G+LN IDGL GDE+I VFTTN+K+R+DPALLR G
Sbjct: 310 RDREAENQED--EQIKG-KVTLSGILNFIDGLWSSFGDERIIVFTTNHKERLDPALLRPG 366
Query: 346 RMDRHINLSYCTFSTFKQLAANYLDIN--DHDLYCHIEKLMEKVKVSPAEVAGELMKAKG 403
RMD HIN+SYCT F+ L +NYL ++ +H L IE L++ +V+PAE+A ELM+
Sbjct: 367 RMDVHINMSYCTGLGFRTLVSNYLGLDGLNHPLCEEIEALVDSTEVTPAELAEELMQDDD 426
Query: 404 SKTSLEDFITYL 415
+ L I+++
Sbjct: 427 TDVVLRGVISFV 438
>TAIR|locus:2077997 [details] [associations]
symbol:BCS1 "cytochrome BC1 synthesis" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009612
"response to mechanical stimulus" evidence=RCA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002686 GO:GO:0017111
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2680378 EMBL:AY064981 EMBL:BT002611 IPI:IPI00548437
RefSeq:NP_190662.2 UniGene:At.23776 ProteinModelPortal:Q8VZG2
SMR:Q8VZG2 STRING:Q8VZG2 PRIDE:Q8VZG2 EnsemblPlants:AT3G50930.1
GeneID:824257 KEGG:ath:AT3G50930 TAIR:At3g50930 InParanoid:Q8VZG2
OMA:QLMRSDE PhylomeDB:Q8VZG2 Genevestigator:Q8VZG2 Uniprot:Q8VZG2
Length = 576
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 181/406 (44%), Positives = 255/406 (62%)
Query: 32 SITRRFSTEITMIIKESHDGSTNRLFKAVVTYL------DGHALSNSVLPKR----LTVG 81
SI FS+++T+II+E + N +F+A YL + S K +TV
Sbjct: 97 SIFGYFSSQMTIIIEEFEGFAHNEVFEAAEAYLATKISPSNKRIKVSKHEKENNYNVTVE 156
Query: 82 KNENVRNFTYGLERNSEIVDVFQGVTMKWKFNS-DINSTSHFETRWYELKFHKMHTELVK 140
++E V + TY + I+ + V K N D+NST E R +EL FHK ++
Sbjct: 157 RDEEVVD-TYNGVKFQWILHC-RHVESKHFHNPRDLNSTLRSEVRSFELNFHKKFKDVAL 214
Query: 141 KKYLVHVLEMAKMFKDRNRIVRFHTIR--------HDRWSSSGVNLDHPMTFGTLVMDGD 192
+ YL +++ A + K + ++ T+ D W+S V LDHP TF TL MD D
Sbjct: 215 ESYLPFMVKRATLMKQEKKTLKIFTLSPENMYGNYSDAWTS--VTLDHPSTFKTLAMDSD 272
Query: 193 LKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNL 252
+K +V+ DLD F + +++Y+++GK WKRGYLLYGPPGTGKSSLIAAMAN++N+DIY+L L
Sbjct: 273 VKTSVMEDLDKFVKRRDFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLNFDIYDLEL 332
Query: 253 SVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQ---VTLAG 309
+ V ++S L LL+ NRSIL+VEDIDCS++L++R S + +D P+ VTL+G
Sbjct: 333 TAVNNNSELRRLLIATANRSILIVEDIDCSLELKDRTSDEPPRESDDIEDPRYKKVTLSG 392
Query: 310 LLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYL 369
LLN IDGL CGDE+I +FTTNYK+++D ALLR GRMD HI++SYCT STFK LA NYL
Sbjct: 393 LLNFIDGLWSSCGDERIIIFTTNYKEKLDAALLRPGRMDMHIHMSYCTPSTFKALALNYL 452
Query: 370 DINDHDLYCHIEKLMEKVKVSPAEVAGELMKAKGSKTSLEDFITYL 415
+I +H L+ IE+ +E +V+PAEVA +LM+ LE I +L
Sbjct: 453 EIKEHRLFSKIEEGIEATEVTPAEVAEQLMRNDSVDKVLEGLIEFL 498
Score = 219 (82.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 58/180 (32%), Positives = 94/180 (52%)
Query: 3 SAFSVVASVAILRSTFNEMIPDEVRGYIW----SITRRFSTEITMIIKESHDGSTNRLFK 58
+A SV A+ + RS + +PDEV YI SI FS+++T+II+E + N +F+
Sbjct: 64 TAASVAATAMLARSLVQDYLPDEVHHYISYGFRSIFGYFSSQMTIIIEEFEGFAHNEVFE 123
Query: 59 AVVTYLDGHALSNSVLPKRLTVGKNENVRNFTYGLERNSEIVDVFQGVTMKW-------- 110
A YL A S KR+ V K+E N+ +ER+ E+VD + GV +W
Sbjct: 124 AAEAYL---ATKISPSNKRIKVSKHEKENNYNVTVERDEEVVDTYNGVKFQWILHCRHVE 180
Query: 111 --KFNS--DINSTSHFETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHTI 166
F++ D+NST E R +EL FHK ++ + YL +++ A + K + ++ T+
Sbjct: 181 SKHFHNPRDLNSTLRSEVRSFELNFHKKFKDVALESYLPFMVKRATLMKQEKKTLKIFTL 240
>TAIR|locus:2175946 [details] [associations]
symbol:AT5G17730 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AB006706 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2686349 IPI:IPI00546054 RefSeq:NP_197275.1
UniGene:At.54888 ProteinModelPortal:Q9FN78 SMR:Q9FN78 PRIDE:Q9FN78
EnsemblPlants:AT5G17730.1 GeneID:831641 KEGG:ath:AT5G17730
TAIR:At5g17730 InParanoid:Q9FN78 OMA:DINCTIE PhylomeDB:Q9FN78
Genevestigator:Q9FN78 Uniprot:Q9FN78
Length = 470
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 175/435 (40%), Positives = 262/435 (60%)
Query: 3 SAFSVVASVAILRSTFNEM-IPDEVRGYIWSITRRF--STEITM-IIKESH--DGSTNRL 56
SA++ + ++ F EM IP ++ Y+ S F ST T+ +I + H +G N L
Sbjct: 15 SAYASLTGYVMMIKPFLEMTIPPPLQNYMISYLNSFLHSTPSTLTLIIDDHIKNGMYNEL 74
Query: 57 FKAVVTYLDGHALSNSVLPKRLTVGKNENVRNFTYGLERNSEIVDVFQGVTMKWKFNSDI 116
+ A Y+ N+ +RL + ++ + +N + D++QG+ +KW+F D
Sbjct: 75 YGAAQVYISTKVNHNA---ERLRISRDRSEKNVNIHFSVGEVVSDIYQGIEVKWRFCVDS 131
Query: 117 NSTS-------HF----ETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHT 165
N ++ HF + EL F K HTELV Y+ +V AK+ + +I++ ++
Sbjct: 132 NKSNMVHYFGEHFKLNPDRECVELSFEKKHTELVLNSYIPYVESKAKVINNERKILKMYS 191
Query: 166 I--RHDRWSSSGVNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYL 223
+ +W S VNL+HP TF T+ M+ +LK +V+ DLD F R K++Y+++GK WKRGYL
Sbjct: 192 YCCMYLKWQS--VNLEHPSTFDTMAMNEELKRSVMGDLDRFIRRKDFYKRVGKPWKRGYL 249
Query: 224 LYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSI 283
LYGPPGTGK+SL+AA+ANY+ +DIY+L L+ V D+ L LLL N SIL+VEDIDC++
Sbjct: 250 LYGPPGTGKTSLVAAIANYLKFDIYDLQLASVREDADLRRLLLGTTNSSILLVEDIDCAV 309
Query: 284 KLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLR 343
L R K + D+ +TL+GLL IDGL CGDE+I +FTT +K+R+DPALLR
Sbjct: 310 DLHTRLQPKTQD--DTKGSSMLTLSGLLTCIDGLWSSCGDERIVIFTTTHKERLDPALLR 367
Query: 344 AGRMDRHINLSYCTFSTFKQLAANYLDIND---HDLYCHIEKLMEKVKVSPAEVAGELMK 400
GRMD HI++ +C F FK LA+NYL ++ H LY IE+L++ ++PA+VA ELMK
Sbjct: 368 PGRMDMHIHMGHCCFDVFKTLASNYLGLSHDDPHHLYPEIERLIKGEVLTPAQVAEELMK 427
Query: 401 AKGSKTSLEDFITYL 415
+ +LE + L
Sbjct: 428 NEDPDVALEGLVKVL 442
>TAIR|locus:2098648 [details] [associations]
symbol:AT3G28540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0017111
EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00530975 RefSeq:NP_189495.1 UniGene:At.42777
ProteinModelPortal:Q9LH82 SMR:Q9LH82 PRIDE:Q9LH82
EnsemblPlants:AT3G28540.1 GeneID:822484 KEGG:ath:AT3G28540
TAIR:At3g28540 InParanoid:Q9LH82 OMA:IITEAYL PhylomeDB:Q9LH82
ProtClustDB:CLSN2685225 ArrayExpress:Q9LH82 Genevestigator:Q9LH82
Uniprot:Q9LH82
Length = 510
Score = 482 (174.7 bits), Expect = 4.6e-78, Sum P(2) = 4.6e-78
Identities = 111/312 (35%), Positives = 171/312 (54%)
Query: 2 GSAFSVVASVAILRSTFNEMIPDEVRGYIWS-ITRRFSTEITMI-IKESHDGSTNRLFKA 59
G + +AS+ S + + +P ++R Y+ + F + IK + L K+
Sbjct: 9 GFTGTTMASLMFFWSVYRQFVPYQIRDYLEKCFYKMFGLVSNSVHIKFTEYTEDKGLKKS 68
Query: 60 VVTYLDGHALSN--SVLPKRLTVGKNENVRNFTYGLERNSEIVDVFQGVTMKWKFN--SD 115
L + LS+ + +RL +++N ++ L+ + + DVFQGV + W +
Sbjct: 69 QAYDLIRNYLSSKSTARAQRLKANESKNSKSLVLSLDNHEAVEDVFQGVKVVWSLSVWKS 128
Query: 116 INSTSHFETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHTI--------- 166
+ E R+ L FH + E++ YL HVL K +NR + +T
Sbjct: 129 NDQADSSEKRYLTLSFHNRYREMITTTYLDHVLREGKEIGLKNRERKLYTNNSSQDYSAW 188
Query: 167 RHDRWSSSGVNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYG 226
R RWS+ V DHP TF TL MD + KE + DL F +GK+YYRK+GK WKRGYLL+G
Sbjct: 189 REGRWSN--VPFDHPATFETLAMDLEKKEGMKKDLIKFTKGKDYYRKVGKPWKRGYLLFG 246
Query: 227 PPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKLQ 286
PPGTGKS++I+AMAN++ YD+Y+L L+ V +S L+ L+L +SI+V+EDIDCS+ L
Sbjct: 247 PPGTGKSTMISAMANFLEYDVYDLELTTVKDNSELKKLMLDTKGKSIVVIEDIDCSLDLT 306
Query: 287 NRESQKGDEPAD 298
+ +K +E D
Sbjct: 307 GQRKKKKEEDED 318
Score = 322 (118.4 bits), Expect = 4.6e-78, Sum P(2) = 4.6e-78
Identities = 65/123 (52%), Positives = 85/123 (69%)
Query: 277 EDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDR 336
ED D + + +E++K + R +VTL+GLLNAIDGL C EKI VFTTNY D+
Sbjct: 315 EDEDEEEEEKKKEAEKLLKRERGERESKVTLSGLLNAIDGLWSACSGEKIIVFTTNYLDK 374
Query: 337 IDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCHIEKLMEKVKVSPAEVAG 396
+DPAL+R GRMD HI +SYC F FK LA NYL+I HDL+ I++L+E+ +SPA+VA
Sbjct: 375 LDPALIRRGRMDNHIEMSYCRFEAFKVLAKNYLEIESHDLFGEIKRLVEETDMSPADVAE 434
Query: 397 ELM 399
LM
Sbjct: 435 NLM 437
>TAIR|locus:2175956 [details] [associations]
symbol:AT5G17740 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2686349 IPI:IPI00523930
RefSeq:NP_197276.1 UniGene:At.65521 ProteinModelPortal:Q9FN77
SMR:Q9FN77 EnsemblPlants:AT5G17740.1 GeneID:831642
KEGG:ath:AT5G17740 TAIR:At5g17740 InParanoid:Q9FN77 OMA:MINTIIP
PhylomeDB:Q9FN77 Genevestigator:Q9FN77 Uniprot:Q9FN77
Length = 533
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 172/435 (39%), Positives = 253/435 (58%)
Query: 6 SVVASVAILRSTFNEMIPDEVRGYIWSITRRF----STEITMIIKE-SHDGSTNRLFKAV 60
S++ V I++ N +IP V+ +++S + F S+ +T+ I + S + L+ A
Sbjct: 19 SMMGYVMIIKPMINTIIPRPVQNFVFSYLKSFAGSRSSTLTLTIDQMSSMYIPDELYAAA 78
Query: 61 VTYLDGHALSNSVLPKRLTVGKNENVRNFTYGLERNSEIVDVFQGVTMKWKFNS-DINST 119
YL NSV RL + ++ + L + DV+ G+ +KW+F + + N+T
Sbjct: 79 QAYLSTKISPNSV---RLIMARDPAEKKVKLYLSDGEVVSDVYNGIKLKWRFLARNKNNT 135
Query: 120 ----------SHFETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHTIRHD 169
+ + EL F K H +LV Y+ +V AK ++ RI++ H H
Sbjct: 136 MVEEYGQSYQGNIQRESLELSFDKKHRDLVVNSYIPYVESKAKEVNNKRRILKMHCYSHM 195
Query: 170 RWSSSGVNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPG 229
+ VN HP TF T+ M+ DLK +++ DLD F K++Y+++GK WKRGYLLYGPPG
Sbjct: 196 AQTWQSVNFKHPSTFDTMAMNDDLKRSMIEDLDRFVGRKDFYKRVGKAWKRGYLLYGPPG 255
Query: 230 TGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRE 289
TGKSSL+AAMANY+ +DIY+L L+ V D+ L LLL N SIL++EDIDCS+ L R
Sbjct: 256 TGKSSLVAAMANYLKFDIYDLQLASVQGDAHLRSLLLATNNSSILLIEDIDCSVDLPTR- 314
Query: 290 SQKGDEPADSYRGPQV----TLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAG 345
Q E + QV TL+GLLN IDGL CG+E+I +FTTN K+++DPALLR G
Sbjct: 315 LQPPTETSQPLGAVQVSKPLTLSGLLNCIDGLWSSCGNERIIIFTTNNKEKLDPALLRPG 374
Query: 346 RMDRHINLSYCTFSTFKQLAANYLDIND-----HDLYCHIEKLMEKVKVSPAEVAGELMK 400
RMD HI + +C+F FK LA+NYL ++D H L I+ L++ ++PA+VA ELMK
Sbjct: 375 RMDMHIYMGHCSFQGFKTLASNYLGLSDENDDTHPLCPDIKHLIDGHVLTPAQVAEELMK 434
Query: 401 AKGSKTSLEDFITYL 415
+ + +LE + L
Sbjct: 435 DEDADAALEGLVKVL 449
>TAIR|locus:2098658 [details] [associations]
symbol:AT3G28510 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005783 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2685225 EMBL:AY099692
IPI:IPI00532130 RefSeq:NP_189492.1 UniGene:At.42784
ProteinModelPortal:Q9LH84 SMR:Q9LH84 PaxDb:Q9LH84
EnsemblPlants:AT3G28510.1 GeneID:822481 KEGG:ath:AT3G28510
TAIR:At3g28510 InParanoid:Q9LH84 OMA:YLEIETH PhylomeDB:Q9LH84
ArrayExpress:Q9LH84 Genevestigator:Q9LH84 Uniprot:Q9LH84
Length = 530
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 161/375 (42%), Positives = 229/375 (61%)
Query: 54 NRLFKAVVTYLDGHALSNSVLPKRLTVGKNENVRNFTYGLERNSEIVDVFQGVTMKWKFN 113
++ + ++ YL A ++ L KRL + +N ++ + ++ + EI D F+GV +KW N
Sbjct: 67 SQAYDSIRNYL---ASKSTALAKRLKANETKNSKSLVFSMDDHEEIEDEFEGVKVKWYSN 123
Query: 114 -------SDINSTSHFETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHTI 166
S+ S E R + L FH+ H ++ + YL HVL K NR + +T
Sbjct: 124 VKVIQPQSNYGQRSSEERRHFTLSFHRRHRGMIIETYLDHVLREGKAIGLMNRERKLYTN 183
Query: 167 RHDR----WSS---SGVNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWK 219
+ W S S V HP TF TL MD + KE + DL F +GK+YY+K+GK WK
Sbjct: 184 NSSQEWYPWRSGKWSNVPFHHPATFETLAMDPEKKEGIKKDLIKFSKGKDYYKKVGKPWK 243
Query: 220 RGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDI 279
RGYLL+GPPGTGKS++IAA+AN+++YD+Y+L L+ V +S L+ LLL ++SI+V+EDI
Sbjct: 244 RGYLLFGPPGTGKSTMIAAIANFLDYDVYDLELTTVKDNSELKKLLLDTTSKSIIVIEDI 303
Query: 280 DCSIKLQNRESQK--------GDEPADSYRGPQV-------TLAGLLNAIDGLLCCCGDE 324
DCS+ L + +K G+E + + P+V TL+GLLN+IDGL C E
Sbjct: 304 DCSLDLTGQRKKKKEEDEEEDGEEKKEGEKKPKVDDKQSKVTLSGLLNSIDGLWSACSGE 363
Query: 325 KITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCHIEKLM 384
KI VFTTN+ D++DPAL+R GRMD HI +SYC F FK LA NYL+I HDLY IE+ +
Sbjct: 364 KIIVFTTNFVDKLDPALIRRGRMDNHIEMSYCKFEAFKVLAKNYLEIETHDLYGEIERKL 423
Query: 385 EKVKVSPAEVAGELM 399
E+ +SPA+VA LM
Sbjct: 424 EETDMSPADVAETLM 438
>TAIR|locus:2095537 [details] [associations]
symbol:AT3G28610 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042991 "transcription factor import into nucleus"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AP000420 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00535388
RefSeq:NP_189502.2 UniGene:At.50994 ProteinModelPortal:Q9LJJ5
SMR:Q9LJJ5 DNASU:822491 EnsemblPlants:AT3G28610.1 GeneID:822491
KEGG:ath:AT3G28610 TAIR:At3g28610 InParanoid:Q9LJJ5 OMA:KETNIAP
PhylomeDB:Q9LJJ5 ProtClustDB:CLSN2685234 Genevestigator:Q9LJJ5
Uniprot:Q9LJJ5
Length = 474
Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
Identities = 164/401 (40%), Positives = 236/401 (58%)
Query: 37 FSTEITMIIKESHDGSTNRLFKAVVTYLDGHALSNSVLPKRLTVGKNENVRNFTYGLERN 96
FS + + E D N F + TYL A + K L + + L+R+
Sbjct: 57 FSPYVQINFSEYEDYRVNHAFDPIETYLGAKATDKA---KHLRASQVRESKGLV--LKRD 111
Query: 97 -SEIVDVFQGVTMKWKFNSDINSTSHFETRWYELKFHKMHTELVKKKYLVHVLEMAKMFK 155
+++ D ++G+ + W+ +D ++ ++T +L FH+ ++V Y+ +V+E K
Sbjct: 112 ETKVRDEYEGIRVWWEMETD---SAGYKT--LKLTFHRRSRDIVTNSYIKYVVEEGKSID 166
Query: 156 DRNRIVRFHTIR-HDRWSSSG------VNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGK 208
+N+ ++ T W SS ++ +HP TF TL MD KE +LNDL F GK
Sbjct: 167 AKNKKMKLFTNNPSSHWGSSKTSFWRYIDFEHPATFETLAMDPKKKEQILNDLAAFNNGK 226
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHV 268
+YY+KIGK WKRGYLLYGPPGTGKS++IAAMAN +NY IY+L L+ + ++S L +L
Sbjct: 227 DYYKKIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYSIYDLELTAIQNNSELRKILTAT 286
Query: 269 PNRSILVVEDIDCSIKLQNRESQK----------GDEPADSYRGPQVTLAGLLNAIDGLL 318
N+SI+V+EDIDCS+ L + +K GD+ + + VTL+GLLN IDG+
Sbjct: 287 SNKSIIVIEDIDCSLDLTGKRKKKESNLMIWRKDGDQDNEENKS-FVTLSGLLNFIDGIW 345
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYC 378
CG E+I VFTTN+ ++DPAL+R GRMD HI LSYCTF FK LA NYLD++ H L+
Sbjct: 346 SACGQERIIVFTTNHLAKLDPALIRRGRMDMHIELSYCTFEAFKTLAKNYLDLDSHPLFS 405
Query: 379 HIEKLMEKVKVSPAEVAGELMKAKGSKT----SLEDFITYL 415
IE LM++ ++PA+VA LMK K +T SL D I L
Sbjct: 406 KIESLMKETNIAPADVAENLMK-KNRETDADGSLNDLIESL 445
>TAIR|locus:2095512 [details] [associations]
symbol:AT3G28580 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005524 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP000420 HSSP:Q9LCZ4 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 ProtClustDB:CLSN2685235
EMBL:AY072076 IPI:IPI00523143 RefSeq:NP_189499.1 UniGene:At.42770
ProteinModelPortal:Q9LJJ7 SMR:Q9LJJ7 STRING:Q9LJJ7
EnsemblPlants:AT3G28580.1 GeneID:822488 KEGG:ath:AT3G28580
TAIR:At3g28580 InParanoid:Q9LJJ7 OMA:PRSKTKD PhylomeDB:Q9LJJ7
ArrayExpress:Q9LJJ7 Genevestigator:Q9LJJ7 Uniprot:Q9LJJ7
Length = 500
Score = 464 (168.4 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
Identities = 100/311 (32%), Positives = 170/311 (54%)
Query: 2 GSAFSVVASVAILRSTFNEMIPDEVRGYIWSITRRFSTEITMIIKESHDGSTNRLFKAVV 61
GSA + + V + F + ++ +++ + RF I + E + G + +A +
Sbjct: 12 GSALATLMFVYTIFKQFFPLFGPQLEPFLYRLFGRFYPYIQITFHE-YSGEHFKRSEAYL 70
Query: 62 TYLDGHALSNSVLPKRLTVGKNENVRNFTYGLERNSEIVDVFQGVTMKWKFNSDINSTSH 121
+ +S K+L + ++ ++ EI D F+G+ + W+ + +
Sbjct: 71 GIQSYLSKDSSARAKKLKANTTKGSKSIVLSMDDKEEITDDFEGIRVWWQSKKEGATRQS 130
Query: 122 F-------ETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHTI-------R 167
F E R+Y L+FH+ E++ ++YL HV+ K + +NR + ++
Sbjct: 131 FSFYPEANEKRYYMLRFHRRDREVIIERYLEHVMREGKTIEQKNRERKLYSNTPGQSHGN 190
Query: 168 HDRWSSSGVNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGP 227
+ +WS V +HP TF TL M+ + KE + +DL F + K+YY+KIGK WKRGYLL+GP
Sbjct: 191 NSKWSH--VTFEHPATFDTLAMEENKKEEIKSDLIKFSKSKDYYKKIGKAWKRGYLLFGP 248
Query: 228 PGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKLQN 287
PGTGKS++IAAMAN++ YD+Y+L L+ V ++ L LL+ +SI+V+EDIDCS+ L
Sbjct: 249 PGTGKSTMIAAMANFLEYDVYDLELTTVKDNTHLRRLLIETSAKSIIVIEDIDCSLNLTG 308
Query: 288 RESQKGDEPAD 298
+ +K +E D
Sbjct: 309 QRKKKEEEEED 319
Score = 293 (108.2 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
Identities = 57/117 (48%), Positives = 84/117 (71%)
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQ 363
+VTL+GLLN IDGL CG E+I VFTTN+ D++DPAL+R GRMD+HI +SYC F FK
Sbjct: 342 KVTLSGLLNFIDGLWSACGGERIIVFTTNFVDKLDPALIRKGRMDKHIEMSYCCFEAFKV 401
Query: 364 LAANYLDINDHDLYCHIEKLME--KVKVSPAEVAGELM---KAKGSKTSLEDFITYL 415
LA NYLD+ + +++ I++L+E ++K++PA+V L+ + +G +T L+ I L
Sbjct: 402 LAKNYLDVEESEMFEEIKRLLEVEEIKMTPADVGENLLPKSEKEGGETCLKRLIEAL 458
>TAIR|locus:2095532 [details] [associations]
symbol:AT3G28600 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00518678 RefSeq:NP_189501.2 UniGene:At.42766
ProteinModelPortal:F4J0C0 SMR:F4J0C0 DNASU:822490
EnsemblPlants:AT3G28600.1 GeneID:822490 KEGG:ath:AT3G28600
OMA:TISHRVA ArrayExpress:F4J0C0 Uniprot:F4J0C0
Length = 477
Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
Identities = 161/398 (40%), Positives = 240/398 (60%)
Query: 37 FSTEITMIIKESHDGSTNRLFKAVVTYLDGHALSNSVLPKRLTVGKNENVRNFTYGLERN 96
FS + + + D N F A+ TYL A + K L + + + L+R+
Sbjct: 58 FSPYVEISFSQYEDYQFNHAFAAIETYLGAKATDKA---KHLRASQVKESKGLV--LKRD 112
Query: 97 -SEIVDVFQGVTMKWKFNSDINSTSHFETRWYELKFHKMHTELVKKKYLVHVLEMAKMFK 155
+++ D ++G T+ W+ +D ST + R ++L FH+ ++V Y+ +V E K +
Sbjct: 113 ETKVRDEYEGGTVWWEMETD--STGY---RTFKLTFHRRSRDIVTDSYIKYVFEEGKSIQ 167
Query: 156 DRNRIVRFHTIR-HDRWSSSG------VNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGK 208
+++ ++ T W +S ++ +HP +F TL MD KE +LNDL F GK
Sbjct: 168 AKSKQMKLFTNNPSSHWGTSKKSFWRYIDFEHPASFHTLAMDTKKKEEILNDLAAFSNGK 227
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHV 268
EYY+KIGK WKRGYLL+GPPGTGKS++IAAMAN++NY IY+L L+ + ++S L LL
Sbjct: 228 EYYKKIGKAWKRGYLLHGPPGTGKSTMIAAMANHLNYSIYDLELTAIRNNSELRKLLTAT 287
Query: 269 PNRSILVVEDIDCSIKLQN-RESQKG--DEPADSYRGPQ-----VTLAGLLNAIDGLLCC 320
++SI+V+EDIDCS+ L R+ +K D +G + VTL+GLLN IDG+
Sbjct: 288 SSKSIIVIEDIDCSLDLTGKRKKEKNLMTSREDGEQGTEEDKSFVTLSGLLNFIDGIWSA 347
Query: 321 CGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCHI 380
CG E+I +FTTN+ +++DPAL+R GRMD HI LSYC+F FK LA NYLD++ H L+ I
Sbjct: 348 CGQERIIIFTTNHFEKLDPALIRRGRMDMHIELSYCSFEAFKILAKNYLDLDTHPLFKKI 407
Query: 381 EKLMEKVKVSPAEVAGELMKAK---GSKTSLEDFITYL 415
E L+++ K++PA+VA LMK + SL+D I L
Sbjct: 408 ESLLKETKIAPADVAENLMKKNTEIDADGSLKDLIQAL 445
>TAIR|locus:2174502 [details] [associations]
symbol:AT5G57480 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0465 GO:GO:0017111
EMBL:AB011482 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2687417 IPI:IPI00541799 RefSeq:NP_200556.1
UniGene:At.49428 ProteinModelPortal:Q9FKM3 SMR:Q9FKM3
EnsemblPlants:AT5G57480.1 GeneID:835852 KEGG:ath:AT5G57480
TAIR:At5g57480 InParanoid:Q9FKM3 OMA:HNNSELR PhylomeDB:Q9FKM3
Genevestigator:Q9FKM3 Uniprot:Q9FKM3
Length = 520
Score = 484 (175.4 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 118/309 (38%), Positives = 165/309 (53%)
Query: 3 SAFSVVASVAILRSTFNEMIPDEVRGYIWSITRR----FSTEITMIIKESHDGSTNRLFK 58
S S++ +A +S + P E+R R FS+ I E +TN L+
Sbjct: 7 SLASLLGVLAFCQSLMQSIFPPELRFAFLKFFNRIFHVFSSYCYFDITEIDGVNTNELYN 66
Query: 59 AVVTYLDGHALSNSVLPKRLTVGKNENVRNFTYGLERNSEIVDVFQGVTMKWKFNSDINS 118
AV YL S S+ RL++ + N + T+GL N IVD F GVT+ W+
Sbjct: 67 AVQLYLSS---SVSIAGNRLSLTRAVNSSSITFGLSNNDSIVDTFNGVTVLWEHVVTQRQ 123
Query: 119 TSHF-------ETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHT-IRHDR 170
T F E R + L+ K L+ YL +++E A + +N+ +T R
Sbjct: 124 TQTFAWRPLPEEKRGFTLRIKKKDKTLILNSYLDYIMERANEIRRKNQDRLLYTNSRGGS 183
Query: 171 WSSSG-----VNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLY 225
S G V HP TF TL MD K+ +++DL F G+ +Y+K G+ WKRGYLLY
Sbjct: 184 LDSRGHPWESVPFKHPSTFETLAMDPRKKQQIMDDLKDFAEGQVFYQKTGRAWKRGYLLY 243
Query: 226 GPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKL 285
GPPGTGKSS+IAAMANY+ YDIY+L L+ V S+S L LL+ ++SI+V+EDIDCSI L
Sbjct: 244 GPPGTGKSSMIAAMANYLGYDIYDLELTEVHSNSELRKLLMKTSSKSIIVIEDIDCSINL 303
Query: 286 QNRESQKGD 294
NR+ +
Sbjct: 304 TNRKKNSSN 312
Score = 260 (96.6 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 55/121 (45%), Positives = 78/121 (64%)
Query: 290 SQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDR 349
S G + G +TL+GLLN DGL CCG E+I VFTTN+ +++DPALLR+GRMD
Sbjct: 330 SGSGGSGEEGGNGNTITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDM 389
Query: 350 HINLSYCTFSTFKQLAANYL-----DINDHDLYCHIEKLMEKVKVSPAEVAGELMKAKGS 404
HI +S+C F + K L NYL DIN D+ +E ++EK +++PA+V+ L+K +
Sbjct: 390 HIYMSFCNFPSLKILLKNYLGYGVEDING-DVLKEMEMVVEKAEMTPADVSEALIKNRRD 448
Query: 405 K 405
K
Sbjct: 449 K 449
>TAIR|locus:2178057 [details] [associations]
symbol:AT5G40000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00516295 RefSeq:NP_198816.1 UniGene:At.51146
ProteinModelPortal:F4KFX5 SMR:F4KFX5 EnsemblPlants:AT5G40000.1
GeneID:833997 KEGG:ath:AT5G40000 OMA:ISAMANY Uniprot:F4KFX5
Length = 470
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 162/400 (40%), Positives = 235/400 (58%)
Query: 34 TRRFSTEITMIIKESHDGSTNRLFKAVVTYLDGHALSNSVLPKRLTVGKNENVRNFTYGL 93
T FS + + ES + S N+ F A+ TYLD A + K L + + + L
Sbjct: 59 TNLFSPYVEIHFPESDEYSFNQAFSAIDTYLDSKATDKT---KHLRGSQVKESKGLV--L 113
Query: 94 ERN-SEIVDVFQGVTMKWKFNSDINSTSHFETRWYELKFHKMHTELVKKKYLVHVLEMAK 152
+RN +++ D ++G + W+ D + R+Y+L FH L+ Y+ +V+E K
Sbjct: 114 KRNEAKVRDEYKGANVWWERVVDNDGN-----RYYKLTFHNRARTLITNSYIKYVVEEGK 168
Query: 153 MFKDRNRIVRFHT--------IRHDRWSSSGVNLDHPMTFGTLVMDGDLKETVLNDLDCF 204
+N+ R T + W S + +HP +F TL MD KE ++NDL F
Sbjct: 169 SIIVKNKQTRLFTNNLSTQWVFGQNMWRS--IEFEHPASFQTLAMDPKKKEEIVNDLIAF 226
Query: 205 RRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL 264
GKEYY+KIGK WKRGYLLYGPPGTGKS++I+AMAN +NY+IY+L L+ V ++S L+ L
Sbjct: 227 SNGKEYYKKIGKAWKRGYLLYGPPGTGKSTMISAMANLLNYNIYDLELTAVKNNSELKKL 286
Query: 265 LLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQ------VTLAGLLNAIDGLL 318
L ++SI+V+EDIDCS + +K + Y G + VTL+GLLN IDG+
Sbjct: 287 LTATSSKSIIVIEDIDCSADFTSNRIKKESNSRERY-GKEDKDENSVTLSGLLNFIDGIW 345
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDIND---HD 375
CG E+I VFTTN+ +++DPAL+R GRMD HI LSYCT+ FK LA NYLD++ H
Sbjct: 346 SACGQERIVVFTTNHLEKLDPALIRRGRMDMHIELSYCTYEAFKILAKNYLDLDGDDAHP 405
Query: 376 LYCHIEKLMEKVKVSPAEVAGELMKAKGSKTSLEDFITYL 415
L+ I+ L+E+ K+SPA+VA LM A+ + ++ + L
Sbjct: 406 LFSEIKALLEETKISPADVAENLM-ARNQQIDVDKSLNLL 444
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 106/321 (33%), Positives = 167/321 (52%)
Query: 2 GSAFSVVASVAILRSTFNEMIPDE----VRGYIWS------ITRRFSTEITMIIK---ES 48
GS S +AS+ L +T ++ PD ++ ++ S +R S T + E
Sbjct: 9 GSIGSSMASLFFLWATIQQIFPDHLKITIKEFLLSSFQQLCFAQRVSDHFTNLFSPYVEI 68
Query: 49 HDGSTNRL-FKAVVTYLDGHALSNSV-LPKRLTVGKNENVRNFTYGLERN-SEIVDVFQG 105
H ++ F + +D + S + K L + + + L+RN +++ D ++G
Sbjct: 69 HFPESDEYSFNQAFSAIDTYLDSKATDKTKHLRGSQVKESKGLV--LKRNEAKVRDEYKG 126
Query: 106 VTMKWKFNSDINSTSHFETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHT 165
+ W+ D + R+Y+L FH L+ Y+ +V+E K +N+ R T
Sbjct: 127 ANVWWERVVDNDGN-----RYYKLTFHNRARTLITNSYIKYVVEEGKSIIVKNKQTRLFT 181
Query: 166 IR-HDRWSSS-----GVNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWK 219
+W + +HP +F TL MD KE ++NDL F GKEYY+KIGK WK
Sbjct: 182 NNLSTQWVFGQNMWRSIEFEHPASFQTLAMDPKKKEEIVNDLIAFSNGKEYYKKIGKAWK 241
Query: 220 RGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDI 279
RGYLLYGPPGTGKS++I+AMAN +NY+IY+L L+ V ++S L+ LL ++SI+V+EDI
Sbjct: 242 RGYLLYGPPGTGKSTMISAMANLLNYNIYDLELTAVKNNSELKKLLTATSSKSIIVIEDI 301
Query: 280 DCSIKLQNRESQKGDEPADSY 300
DCS + +K + Y
Sbjct: 302 DCSADFTSNRIKKESNSRERY 322
>TAIR|locus:2037186 [details] [associations]
symbol:AT1G43910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005783 EMBL:CP002684 GO:GO:0009506
GO:GO:0005524 GO:GO:0009737 GO:GO:0005794 HSSP:Q01853 GO:GO:0017111
EMBL:AC022314 UniGene:At.28764 UniGene:At.48277 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00548009 PIR:C96503 RefSeq:NP_175058.1
ProteinModelPortal:Q9LP11 SMR:Q9LP11 STRING:Q9LP11 PRIDE:Q9LP11
EnsemblPlants:AT1G43910.1 GeneID:840990 KEGG:ath:AT1G43910
InParanoid:Q9LP11 OMA:MWESTVF ProtClustDB:CLSN2679597
Genevestigator:Q9LP11 Uniprot:Q9LP11
Length = 475
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 158/434 (36%), Positives = 252/434 (58%)
Query: 3 SAFSVVASVAILRSTFNEMIPDEVRGYIWS-----ITRRFSTEITMIIKESHDGSTNRLF 57
++FS + + R+ NE++P +R YI + F ++ T +I++ + N+ F
Sbjct: 19 TSFSAITM--LFRTILNEIVPKRIREYIAMKAVDFFSSYFQSDFTFVIEQRWEFVENQTF 76
Query: 58 KAVVTYLDGHALSNSVLPKRLTVGKNENVRNFT----YGLERNSEIVDVFQGVTMKWKFN 113
+A YL S +L VG + N++N G+ N++I+D F+G+ ++W +
Sbjct: 77 RAAEVYLPTCLAGLST--GKLLVGSS-NLKNPAAEPKLGIPVNTKIIDNFEGIHLEWTLH 133
Query: 114 SDINSTSHF-ETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHTIRHDRWS 172
S + + + E R++ L K E + Y ++ + A+ ++ +T DR
Sbjct: 134 S-VETKKYLPEKRYFHLTCKKEFREKIMTDYFTYLAKSAEKIMSHRENLKIYTYNQDRSK 192
Query: 173 SSGVNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGK 232
+H TF TL ++ DLK+T+++DLD F +GK++++ +G+ WKRGYLLYGPPGTGK
Sbjct: 193 WESAIFEHHTTFETLAVEPDLKKTLIDDLDAFSKGKDFFKSVGRAWKRGYLLYGPPGTGK 252
Query: 233 SSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKL-QNRESQ 291
SS++AA+AN+M Y IY+L + V D L +L NRSIL++EDIDC + R+S+
Sbjct: 253 SSMVAAIANHMKYHIYDLQIQSVRDDGELREILTSTKNRSILLIEDIDCGADASRRRQSK 312
Query: 292 KGDEPADSYRG-PQ---------VTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPAL 341
K +E G PQ ++L+GLLN +DGL CG+EKI +FTTN+K+++DPAL
Sbjct: 313 KKEEDGGEDDGEPQKRKKKFEVGISLSGLLNFVDGLWSSCGEEKIIIFTTNHKEKLDPAL 372
Query: 342 LRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELMKA 401
LR GRMD HI + CT FK+L A YL ++H L+ IEKL+ +V +PAEV +LM +
Sbjct: 373 LRPGRMDVHILMDNCTPFVFKKLVALYLKTDEHVLFDPIEKLILEVSSTPAEVTQQLMAS 432
Query: 402 KGSKTSLEDFITYL 415
K + +L+ +L
Sbjct: 433 KNADIALKGLAEFL 446
>TAIR|locus:2098638 [details] [associations]
symbol:AT3G28520 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00524283 RefSeq:NP_189493.1 UniGene:At.53541
ProteinModelPortal:F4J0B1 SMR:F4J0B1 PRIDE:F4J0B1
EnsemblPlants:AT3G28520.1 GeneID:822482 KEGG:ath:AT3G28520
OMA:YLENESH ArrayExpress:F4J0B1 Uniprot:F4J0B1
Length = 478
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 161/405 (39%), Positives = 232/405 (57%)
Query: 20 EMIPDEVRGYIWSITRRFSTEITMIIKE-SHDG-STNRLFKAVVTYLDGHALSNSVLPKR 77
E + + ++ Y+ + RR S + + E + +G S +R + + YL + + + KR
Sbjct: 21 EYLENTIQKYLDKLFRRDSNFVYIRFPEYTGEGLSKSRAYDEIGNYLSSISTARA---KR 77
Query: 78 LTVGKNENVRNFTYGLERNSEIVDVFQGVTMKWKFNSDINSTSHF--ETRWYELKFHKMH 135
L ++EN ++ L+ + +V VFQGV + W H E R+ L F H
Sbjct: 78 LKAKESENSKSLVLCLDDDEAVVVVFQGVNVVWSSTVVDKEDKHNSKEGRYLTLTFENHH 137
Query: 136 TELVKKKYLVHVLEMAKMFKDRNRIVRFHTIRHDR-----WSS--SGVNLDHPMTFGTLV 188
+++ Y+ HVL K +NR + +T W S V +H +F TL
Sbjct: 138 RDIITNTYIDHVLREGKEIALKNRERKLYTNNDSSSYSSWWEGLWSNVPFNHHASFETLG 197
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
MD D KE + DL F +GK+YYRK+ K WKRGYLL+GPPGTGKS++I+A+AN++ YD+Y
Sbjct: 198 MDLDKKEEIKKDLIKFTKGKDYYRKVAKPWKRGYLLFGPPGTGKSTMISAIANFLEYDVY 257
Query: 249 NLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQ---- 304
+L L+ V ++ L+ L+L +SI+V+EDIDCS++L +K +E D +
Sbjct: 258 DLELTTVKDNAELKKLMLDTKGKSIVVIEDIDCSLELTEHRKKKKEEDEDKEEKKEAENL 317
Query: 305 ----------VTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLS 354
VTL+GLLNAIDGL C DEKI +FTTN+ D +DPAL+R GRMD HI +S
Sbjct: 318 KRVSGNNESNVTLSGLLNAIDGLWSACSDEKIIIFTTNFVDNLDPALIRRGRMDYHIEMS 377
Query: 355 YCTFSTFKQLAANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELM 399
YC F FK LA NYL+ HDLY I +L+E+V VSPA+VA LM
Sbjct: 378 YCRFEAFKVLAKNYLENESHDLYGEIGRLLEEVDVSPADVAENLM 422
>TAIR|locus:2095502 [details] [associations]
symbol:AT3G28570 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00542062 RefSeq:NP_189498.1 UniGene:At.53543
ProteinModelPortal:F4J0B7 SMR:F4J0B7 EnsemblPlants:AT3G28570.1
GeneID:822487 KEGG:ath:AT3G28570 OMA:IHAMELE Uniprot:F4J0B7
Length = 451
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 166/373 (44%), Positives = 228/373 (61%)
Query: 54 NRLFKAVVTYLDGHALSNSVLPKRLTVGKNENVRNFTYGLERNS-EIVDVFQGVTMKWKF 112
N F AV TYL G +++ V K L G N+ N + L+R+ +I + ++GV M W+
Sbjct: 73 NYAFAAVKTYL-GAKVNSEV--KNLK-G-NQVKENMSLDLKRDDVKIEEEYEGVKMWWEI 127
Query: 113 NSDINSTSHFETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHTIRHD-RW 171
+ + L FH+ + ++V YL +V+E K K R + V W
Sbjct: 128 FRCVKGK-----KICRLTFHRSNWDVVTGSYLRYVVEEGKSIKARKKKVMVLMNNPSLNW 182
Query: 172 SSS--GV----NLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLY 225
+S G+ +HP TF TL MD D K+ + DL FR GKEYY +IGK WKRGYLLY
Sbjct: 183 KTSMKGLWTCTEFEHPATFDTLAMDIDKKDEIFRDLVAFRDGKEYYDRIGKAWKRGYLLY 242
Query: 226 GPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKL 285
GPPGTGKS++IAAMAN M Y+IY+L L+ + ++ L+ LL+ N+SI+V+EDIDCS+ L
Sbjct: 243 GPPGTGKSTMIAAMANLMKYNIYDLELTSIGNNWELKKLLIATTNKSIIVIEDIDCSLDL 302
Query: 286 QN-RESQ--KGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALL 342
RE + KGD+ + + VTL+GLLN IDG+ CG E+I VFTTN+ ++D AL+
Sbjct: 303 TGEREVKDLKGDK--EGKKSNAVTLSGLLNFIDGIWSACGQERILVFTTNHVGKLDQALI 360
Query: 343 RAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELMKAK 402
R GRMD HI LSYCTF FK LA NYL+I+ H L+ IE L+++ K++PA+VA E M AK
Sbjct: 361 RRGRMDMHIELSYCTFGAFKILAKNYLNIDSHHLFGEIESLLKETKITPADVA-EHMMAK 419
Query: 403 GSKTSLEDFITYL 415
SL+ I L
Sbjct: 420 EVDGSLKGLIRAL 432
>TAIR|locus:2178067 [details] [associations]
symbol:AATP1 "AAA-ATPase 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0010154
"fruit development" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0010431 EMBL:AB010077 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00538441
RefSeq:NP_198817.1 UniGene:At.65609 ProteinModelPortal:Q9FLD5
SMR:Q9FLD5 PRIDE:Q9FLD5 EnsemblPlants:AT5G40010.1 GeneID:833998
KEGG:ath:AT5G40010 TAIR:At5g40010 InParanoid:Q9FLD5 OMA:HEEITDE
PhylomeDB:Q9FLD5 ProtClustDB:CLSN2685235 Genevestigator:Q9FLD5
Uniprot:Q9FLD5
Length = 514
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 150/350 (42%), Positives = 210/350 (60%)
Query: 56 LFKAVVTYLDGHALSNSVLPKRLTVGKNENVRNFTYGLERNSEIVDVFQGVTMKW---KF 112
++ A+ +YL + S + K+LT + ++ ++ + EI D FQGV + W K
Sbjct: 69 VYDAIQSYLSKDSSSRA---KKLTANTIKGNKSIILSMDDHEEITDEFQGVKVWWQSKKH 125
Query: 113 NSDINSTSHF----ETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHTIRH 168
S+ + S + E+R+Y LKFH+ E++ KKYL HV+ K + +NR + ++
Sbjct: 126 QSESRAISFYPKADESRFYMLKFHRRDREVITKKYLNHVISEGKTIEVKNRERKLYSNNP 185
Query: 169 DR-WSS------SGVNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRG 221
+ WS S V +HP TF TL M+ KE + NDL F K+YY+KIGK WKRG
Sbjct: 186 SQNWSGYKQTKWSHVTFEHPATFDTLAMEYKKKEEIKNDLIKFSNSKDYYKKIGKAWKRG 245
Query: 222 YLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDC 281
YLL+GPPGTGKS++IAAMAN + YD+Y+L L+ V ++ L LL+ +SI+V+EDIDC
Sbjct: 246 YLLFGPPGTGKSTMIAAMANLLEYDVYDLELTTVKDNTELRRLLIETSGKSIIVIEDIDC 305
Query: 282 SIKLQNRESQKGDEPADS----------------YRGPQVTLAGLLNAIDGLLCCCGDEK 325
S+ L + QK DE D +G +VTL+GLLN IDGL CG E+
Sbjct: 306 SLDLTGQRKQKKDEEEDEDETSPIEKQMKKDQGENKGSKVTLSGLLNFIDGLWSACGGER 365
Query: 326 ITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHD 375
I VFTTN+ D++DPAL+R GRMD+HI +SYC F FK LA NYLD + D
Sbjct: 366 IIVFTTNFIDKLDPALIRKGRMDKHIEMSYCGFEAFKVLANNYLDAKEED 415
Score = 290 (107.1 bits), Expect = 9.0e-23, P = 9.0e-23
Identities = 59/123 (47%), Positives = 86/123 (69%)
Query: 289 ESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMD 348
E Q + ++ +G +VTL+GLLN IDGL CG E+I VFTTN+ D++DPAL+R GRMD
Sbjct: 330 EKQMKKDQGEN-KGSKVTLSGLLNFIDGLWSACGGERIIVFTTNFIDKLDPALIRKGRMD 388
Query: 349 RHINLSYCTFSTFKQLAANYLDI---NDHDLYCHIEKLME--KVKVSPAEVAGELMKAKG 403
+HI +SYC F FK LA NYLD +D++L+ I++L+E ++K++PA+V L+K
Sbjct: 389 KHIEMSYCGFEAFKVLANNYLDAKEEDDNELFDEIKRLLEVEEIKMTPADVGENLLKKSE 448
Query: 404 SKT 406
+T
Sbjct: 449 VET 451
>TAIR|locus:505006520 [details] [associations]
symbol:AT4G25835 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 EMBL:AY075607 IPI:IPI00532146
RefSeq:NP_567730.1 UniGene:At.32228 ProteinModelPortal:Q8RY66
SMR:Q8RY66 PRIDE:Q8RY66 EnsemblPlants:AT4G25835.1 GeneID:828689
KEGG:ath:AT4G25835 TAIR:At4g25835 InParanoid:Q8RY66 OMA:IMEKANE
PhylomeDB:Q8RY66 ProtClustDB:CLSN2687417 Genevestigator:Q8RY66
Uniprot:Q8RY66
Length = 506
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 170/422 (40%), Positives = 233/422 (55%)
Query: 3 SAFSVVASVAILRSTFNEMIPDEVRGYIWSITRRF----STEITMIIKESHDGSTNRLFK 58
S S++ +A +S N + P E+R I + +F ST I E +TN L+
Sbjct: 7 SLASLLGVLAFCQSLMNSVFPPELRFAISKLFNKFFKLFSTFCYFDITEIDGVNTNELYN 66
Query: 59 AVVTYLDGHALSNSVLPKRLTVGKNENVRNFTYGLERNSEIVDVFQGVTMKWKFNSDINS 118
AV YL S S+ RL++ + N + T+GL N IVD F VT+ W+
Sbjct: 67 AVQLYLSS---SVSIAGNRLSLTRAVNSSSVTFGLSNNDSIVDTFNSVTVVWEHIVTQRQ 123
Query: 119 TSHF-------ETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHT-IRHDR 170
T F E R + L+ K L+ YL +++E A + N+ +T R
Sbjct: 124 TQTFAWRPMPEEKRGFTLRIKKKDKNLILDSYLDYIMEKANEIRRLNQDRLLYTNSRGGS 183
Query: 171 WSSSG-----VNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLY 225
S G V HP TF TL MD K+ ++ DL F + +Y + G+ WKRGYLLY
Sbjct: 184 LDSRGLPWESVPFKHPSTFDTLAMDPVKKQQIMEDLKDFAECQSFYERTGRAWKRGYLLY 243
Query: 226 GPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKL 285
GPPGTGKSS+IAAMANY+ YDIY+L L+ V S+S L LL+ ++SI+V+EDIDCSI L
Sbjct: 244 GPPGTGKSSMIAAMANYLRYDIYDLELTEVKSNSELRKLLMKTSSKSIIVIEDIDCSINL 303
Query: 286 QNRESQKG----DEPA---------DSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTN 332
NR ++ +EP D G +TL+GLLN DGL CCG E+I VFTTN
Sbjct: 304 TNRNKKQSTGSYNEPEMLTGSGLGDDLGDGNTITLSGLLNFTDGLWSCCGSERIFVFTTN 363
Query: 333 YKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCHIEKLMEKVKVSPA 392
+ +++DPALLR+GRMD HI++SYCTFS+ K L NYL + DL + K + +V V A
Sbjct: 364 HIEKLDPALLRSGRMDMHIHMSYCTFSSVKILLRNYLGFEEGDLNDVVLKELAEV-VDRA 422
Query: 393 EV 394
E+
Sbjct: 423 EI 424
Score = 268 (99.4 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 54/117 (46%), Positives = 80/117 (68%)
Query: 293 GDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHIN 352
GD+ D G +TL+GLLN DGL CCG E+I VFTTN+ +++DPALLR+GRMD HI+
Sbjct: 327 GDDLGD---GNTITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIH 383
Query: 353 LSYCTFSTFKQLAANYLDINDHDL----YCHIEKLMEKVKVSPAEVAGELMKAKGSK 405
+SYCTFS+ K L NYL + DL + +++++ +++PA+V+ L+K + K
Sbjct: 384 MSYCTFSSVKILLRNYLGFEEGDLNDVVLKELAEVVDRAEITPADVSEALIKNRRDK 440
>TAIR|locus:2175976 [details] [associations]
symbol:AT5G17750 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00522104 RefSeq:NP_197277.1 UniGene:At.54890
ProteinModelPortal:F4KID5 SMR:F4KID5 EnsemblPlants:AT5G17750.1
GeneID:831643 KEGG:ath:AT5G17750 OMA:YIAYVER Uniprot:F4KID5
Length = 392
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 150/337 (44%), Positives = 208/337 (61%)
Query: 69 LSNSVLP--KRLTVGKNENVRNFTYGLERNSEIVDVFQGVTMKWKFNSDINSTSHF---E 123
LS+ + P +L + ++ N +N L + + DV++G+ +KW++ N + E
Sbjct: 58 LSSKISPDASKLRMTRDPNNKNVNLHLSQGEVVSDVYKGIELKWRYLEGRNKKTTVVGEE 117
Query: 124 TR-----W--YELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHTIRHD--RWSSS 174
T W +EL F K H +LV K Y+ +V AK+ K+ RI++ H+ RW S
Sbjct: 118 TEEAIVNWQCFELSFDKKHKDLVVKSYIAYVERKAKVIKEERRIIKMHSYSSYTLRWQS- 176
Query: 175 GVNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSS 234
V +HP TF T+ M LK +V+ DLD F + K+YY+++GK WKR Y LYGPPGTGKSS
Sbjct: 177 -VKFEHPSTFHTMAMTPKLKSSVMEDLDRFIKRKDYYKRVGKAWKRSYFLYGPPGTGKSS 235
Query: 235 LIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGD 294
L+AAMANY+ +DIY+L L+ V D+ L LLL N SIL+VEDIDCS+ L R Q
Sbjct: 236 LVAAMANYLKFDIYDLQLANVQGDAQLRSLLLATNNSSILLVEDIDCSVDLPTR-LQPAT 294
Query: 295 EPADSYRGPQ-VTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
+ +G +TL+GLLN IDGL CGDE+I +FTTN K+ +DPALLR G MD HI L
Sbjct: 295 TTLGAPKGSTPLTLSGLLNCIDGLWSSCGDERIVIFTTNNKEVLDPALLRPGCMDMHIYL 354
Query: 354 SYCTFSTFKQLAANYL----DIND-HDLYCHIEKLME 385
+C+F FK LA+NYL D +D H LY I++L++
Sbjct: 355 GHCSFEGFKILASNYLGMPHDSDDPHRLYPDIKRLID 391
>TAIR|locus:2128916 [details] [associations]
symbol:AT4G30250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00517260 RefSeq:NP_194754.2 UniGene:At.65015
ProteinModelPortal:F4JPK8 SMR:F4JPK8 EnsemblPlants:AT4G30250.1
GeneID:829148 KEGG:ath:AT4G30250 Uniprot:F4JPK8
Length = 519
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 146/364 (40%), Positives = 210/364 (57%)
Query: 68 ALSNSVLPKRLTVGKNENVRNFTYGLERNSEIVDVFQGVTMKWKF---NSDINSTSHF-- 122
A+S+S RL++ + N + T+GL N I DVF GVT+ W+ + S S
Sbjct: 81 AVSSSNNNTRLSLTRVPNSSSVTFGLSNNDRITDVFNGVTILWEHVVVQRQVQSFSWRPM 140
Query: 123 --ETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHT--------IRHDRWS 172
E R + L+ +K LV YL +++ ++ + RN +T R W
Sbjct: 141 PEEKRGFTLQINKRDKALVLDSYLDYIVGKSEEIRRRNEERLLYTNSRGVSLDARSHPWD 200
Query: 173 SSGVNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGK 232
S V HP TF TL MD + K+ ++ DL F G+ +Y+K G+ WKRGYLLYGPPGTGK
Sbjct: 201 S--VRFKHPSTFDTLAMDPEKKKRIMEDLREFANGQGFYQKTGRAWKRGYLLYGPPGTGK 258
Query: 233 SSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQK 292
SSLIAAMANY+ YDIY+L L+ V ++S L LL+ ++SI+V+EDIDCSI L R K
Sbjct: 259 SSLIAAMANYLGYDIYDLELTEVQNNSELRKLLMKTSSKSIIVIEDIDCSISLTKRGKNK 318
Query: 293 GDEPADSYR------------GPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPA 340
+ Y G VTL+GLLN DGL CCG EKI VFTTN+ +++D A
Sbjct: 319 KKNGSYEYDPGLTNGSGLEEPGSSVTLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDSA 378
Query: 341 LLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYC----HIEKLMEKVKVSPAEVAG 396
L+R+GRMD H+++ +C F K L NYL + + D+ +E+ +E+ +++PA+V+
Sbjct: 379 LMRSGRMDMHVHMGFCKFPALKILLKNYLRLEEEDMDSVVLKEMEECVEEAEITPADVSE 438
Query: 397 ELMK 400
L++
Sbjct: 439 VLIR 442
Score = 150 (57.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 58/195 (29%), Positives = 93/195 (47%)
Query: 6 SVVASVAILRSTFNEMIPDEVR-GYIWSITR-R--FSTEITMIIKESHDGSTNRLFKAVV 61
S++ +A ++ + P E+R ++ +TR R FS+ I I E +TN L+ AV
Sbjct: 10 SLLGMLAFCQTIVQLVFPPELRLAFLHFLTRIRHVFSSHIYFDITEIDGVNTNELYNAVQ 69
Query: 62 TYLDGH-----ALSNSVLPKRLTVGKNENVRNFTYGLERNSEIVDVFQGVTMKWKF---N 113
YL A+S+S RL++ + N + T+GL N I DVF GVT+ W+
Sbjct: 70 LYLSSSVTVNDAVSSSNNNTRLSLTRVPNSSSVTFGLSNNDRITDVFNGVTILWEHVVVQ 129
Query: 114 SDINSTSHF----ETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHTIRHD 169
+ S S E R + L+ +K LV YL +++ ++ + RN +T
Sbjct: 130 RQVQSFSWRPMPEEKRGFTLQINKRDKALVLDSYLDYIVGKSEEIRRRNEERLLYT---- 185
Query: 170 RWSSSGVNLD---HP 181
+S GV+LD HP
Sbjct: 186 --NSRGVSLDARSHP 198
>TAIR|locus:2115954 [details] [associations]
symbol:AT4G05380 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AL161503 HOGENOM:HOG000237995 IPI:IPI00526918
PIR:F85067 RefSeq:NP_192447.1 UniGene:At.54165
ProteinModelPortal:Q9M0V7 SMR:Q9M0V7 STRING:Q9M0V7 PaxDb:Q9M0V7
PRIDE:Q9M0V7 EnsemblPlants:AT4G05380.1 GeneID:825886
KEGG:ath:AT4G05380 TAIR:At4g05380 InParanoid:Q9M0V7 OMA:DETEYGE
PhylomeDB:Q9M0V7 ProtClustDB:CLSN2916038 Genevestigator:Q9M0V7
Uniprot:Q9M0V7
Length = 248
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 113/234 (48%), Positives = 167/234 (71%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
M+ +LK T++ DLD F GK++++ +G+ WKRGYLLYGPPGTGKSSL+AA+AN+MNY IY
Sbjct: 1 MEPELKNTLIRDLDAFSNGKDFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIANFMNYSIY 60
Query: 249 NLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCS-----IKLQNR-ESQKGD-EPADSYR 301
+L + V D+ L +L NRSIL++ED+DCS + +N+ E++ G+ + +
Sbjct: 61 DLQIQSVKDDAMLRQILTSTENRSILLIEDLDCSGADTTCRKENKDETEYGENQNKKKKK 120
Query: 302 GPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTF 361
P+VTL+GLLN +DGL C +E+I +FTTN+K+++DPALLR GRMD HI + YCT F
Sbjct: 121 DPKVTLSGLLNFVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGRMDVHILMDYCTPIVF 180
Query: 362 KQLAANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELMKAKGSKTSLEDFITYL 415
K+LAA YL+I +H+L+ IEK+ +VK +PAE+ +LM +K +L+ + +L
Sbjct: 181 KKLAALYLEIEEHELFDPIEKMFLEVKATPAEITEKLMVSKDPDVTLKGLVEFL 234
>TAIR|locus:2039981 [details] [associations]
symbol:AT2G46620 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009693 "ethylene biosynthetic process" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 IPI:IPI00525526
RefSeq:NP_182185.2 UniGene:At.19721 ProteinModelPortal:F4IJ77
SMR:F4IJ77 EnsemblPlants:AT2G46620.1 GeneID:819274
KEGG:ath:AT2G46620 OMA:CDDLRAL InterPro:IPR025753 Pfam:PF14363
Uniprot:F4IJ77
Length = 491
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 144/389 (37%), Positives = 212/389 (54%)
Query: 45 IKESHDG-STNRLFKAVVTYLDG-HALSNSVLPKRLTVGKNENVRNFTYGLERNSEIVDV 102
+ E +D N L++ V YL+ ++ NS T GK N L+RN + D
Sbjct: 53 VPEFNDNVQENHLYQKVYMYLNSLSSIENSDFTNLFT-GKKSN--EIILRLDRNQVVGDE 109
Query: 103 FQGVTMKWKFNSDINSTSHFETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVR 162
F G + W IN R + LK K + YL H+ ++ + RN ++
Sbjct: 110 FLGARVCW-----INGEDEDGARNFVLKIRKADKRRILGSYLQHIHTVSDELEQRNTELK 164
Query: 163 -FHTI-----------RHDRWSSSGVNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEY 210
F + ++ RW S + DHP TF + M+ DLK V +DL+ F +GK+Y
Sbjct: 165 LFINVGIDDHLNKKKKKNGRWRS--IPFDHPCTFDNIAMETDLKNKVKSDLESFLKGKQY 222
Query: 211 YRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPN 270
Y ++G+VWKR YLLYGP GTGKSS +AAMAN+++YD+Y+++LS V DS L+ LLL
Sbjct: 223 YNRLGRVWKRSYLLYGPSGTGKSSFVAAMANFLDYDVYDIDLSKVVDDSDLKMLLLQTRG 282
Query: 271 RSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCC-GDEKITVF 329
+S++V+ED+D + S + V L+G+LN D +L C DE+I VF
Sbjct: 283 KSVIVIEDLDRHL---------------STKSTAVNLSGILNFTDSILSSCTADERIMVF 327
Query: 330 TTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCHIEKLMEK-VK 388
T K++IDPA+LR GR+D HI+ C F+ FK LA NYL + +H L+ +E + +
Sbjct: 328 TMTGKEQIDPAMLRPGRVDVHIHFPLCDFTAFKTLANNYLGVKEHKLFSQVEGIFQNGAS 387
Query: 389 VSPAEVAGELMKA-KGSKT-SLEDFITYL 415
+SPAE+ GELM A + S T +L+ I L
Sbjct: 388 LSPAEI-GELMIANRNSPTRALKHVINAL 415
>TAIR|locus:2086591 [details] [associations]
symbol:AT3G29800 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:CP002686
EMBL:AP000736 HOGENOM:HOG000237995 IPI:IPI00525495
RefSeq:NP_189629.1 UniGene:At.53586 ProteinModelPortal:Q9LJ50
SMR:Q9LJ50 IntAct:Q9LJ50 PRIDE:Q9LJ50 EnsemblPlants:AT3G29800.1
GeneID:822695 KEGG:ath:AT3G29800 TAIR:At3g29800 InParanoid:Q9LJ50
PhylomeDB:Q9LJ50 ArrayExpress:Q9LJ50 Genevestigator:Q9LJ50
Uniprot:Q9LJ50
Length = 440
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 117/322 (36%), Positives = 182/322 (56%)
Query: 98 EIVDVFQGVTMKWKFNSDINSTSHFETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDR 157
E D++QG +KW+ D N+ + + +EL+F + H +LV Y+ V AK K +
Sbjct: 78 EFDDIYQGAKLKWRIFVDKNNIGNIPKQCFELRFDEKHRDLVFDSYIPFVESKAKEIKSK 137
Query: 158 NRIVRFHTIRHDRWSSSGVNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKV 217
RI+ HT H + LDH +F T+VM DLK +++D+D F +++Y+++G+
Sbjct: 138 KRILEMHTYSHCCDTWETKILDHHSSFETIVMKEDLKRRLIDDIDLFISKEDFYKRVGRH 197
Query: 218 WKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVE 277
W R YLL+G PG GK+SL+AA+A Y+N+D+YN+ V T D L+ V + SIL+VE
Sbjct: 198 WMRYYLLHGLPGAGKTSLVAAIAKYLNFDVYNITQGVKT-DFDTRRLIRRVEDSSILLVE 256
Query: 278 DIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRI 337
DID S++ G +V L+ LL+++ G ++ +FTTN K+R
Sbjct: 257 DIDTSLE-----------------GSKVALSQLLSSLTWPWSN-GKARVVIFTTNNKERF 298
Query: 338 DPALLRAGRMDRHINLSYCTFSTFKQLAANYLDI---ND--HDLYCHIEKLMEKVKVSPA 392
D LL RM+ I + +C F FK LA+NYL I ND H LY I++L++ V+P
Sbjct: 299 DQTLLC--RMEMKIYMGHCCFEDFKTLASNYLGISHDNDAPHRLYPDIKRLIDGQAVTPG 356
Query: 393 EVAGELMKAKGSKTSLEDFITY 414
+V ELMK++ +L+ + Y
Sbjct: 357 QVVEELMKSQDVDVALQSLVRY 378
Score = 380 (138.8 bits), Expect = 7.3e-35, P = 7.3e-35
Identities = 78/199 (39%), Positives = 120/199 (60%)
Query: 88 NFTYGLERNSEIVDVFQGVTMKWKFNSDINSTSHFETRWYELKFHKMHTELVKKKYLVHV 147
N + ER E D++QG +KW+ D N+ + + +EL+F + H +LV Y+ V
Sbjct: 70 NLDFVEER--EFDDIYQGAKLKWRIFVDKNNIGNIPKQCFELRFDEKHRDLVFDSYIPFV 127
Query: 148 LEMAKMFKDRNRIVRFHTIRH--DRWSSSGVNLDHPMTFGTLVMDGDLKETVLNDLDCFR 205
AK K + RI+ HT H D W + LDH +F T+VM DLK +++D+D F
Sbjct: 128 ESKAKEIKSKKRILEMHTYSHCCDTWETK--ILDHHSSFETIVMKEDLKRRLIDDIDLFI 185
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLL 265
+++Y+++G+ W R YLL+G PG GK+SL+AA+A Y+N+D+YN+ V T D L+
Sbjct: 186 SKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVAAIAKYLNFDVYNITQGVKT-DFDTRRLI 244
Query: 266 LHVPNRSILVVEDIDCSIK 284
V + SIL+VEDID S++
Sbjct: 245 RRVEDSSILLVEDIDTSLE 263
>CGD|CAL0005742 [details] [associations]
symbol:orf19.458 species:5476 "Candida albicans" [GO:0008320
"protein transmembrane transporter activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0032979 "protein insertion into mitochondrial membrane from
inner side" evidence=IEA] [GO:0051131 "chaperone-mediated protein
complex assembly" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 CGD:CAL0005742 GO:GO:0005524
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
HOGENOM:HOG000198799 EMBL:AACQ01000078 EMBL:AACQ01000077
RefSeq:XP_715892.1 RefSeq:XP_715943.1 ProteinModelPortal:Q5A283
STRING:Q5A283 GeneID:3642454 GeneID:3642502 KEGG:cal:CaO19.458
KEGG:cal:CaO19.8089 Uniprot:Q5A283
Length = 444
Score = 362 (132.5 bits), Expect = 8.3e-33, P = 8.3e-33
Identities = 81/205 (39%), Positives = 129/205 (62%)
Query: 185 GTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMN 244
G++++D + E ++ND+ F E+Y K G ++RGYLLYGPPG+GK+S I A+A ++
Sbjct: 213 GSVILDEGIAENIVNDVKDFLTSGEWYHKRGIPYRRGYLLYGPPGSGKTSFIQALAGELD 272
Query: 245 YDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGP 303
Y+I LNLS +D L +L+ H+PNRSIL++ED+D + N+ Q D+ ++ G
Sbjct: 273 YNICILNLSENNLTDDRLNHLMNHIPNRSILLLEDVDAAF---NKREQTNDQGFNN--G- 326
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQ 363
VT +GLLNA+DG+ +E IT TTN+ +++DPALLR GR+D + + T K+
Sbjct: 327 -VTFSGLLNALDGV--ASAEECITFMTTNHPEKLDPALLRPGRVDYKVMIDNATEHQVKR 383
Query: 364 LAANYLDINDHDLYCHIEKLMEKVK 388
+ + + N+ +L C EK + K +
Sbjct: 384 MFLRFYE-NEEEL-C--EKFLAKYR 404
>WB|WBGene00010042 [details] [associations]
symbol:bcs-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 eggNOG:COG0465 GO:GO:0017111 EMBL:Z49967
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
PIR:T22632 RefSeq:NP_001022191.1 ProteinModelPortal:Q20755
SMR:Q20755 STRING:Q20755 PaxDb:Q20755 PRIDE:Q20755
EnsemblMetazoa:F54C9.6a.1 EnsemblMetazoa:F54C9.6a.2
EnsemblMetazoa:F54C9.6a.3 GeneID:174372 KEGG:cel:CELE_F54C9.6
UCSC:F54C9.6a.2 CTD:174372 WormBase:F54C9.6a InParanoid:Q20755
NextBio:883750 ArrayExpress:Q20755 Uniprot:Q20755
Length = 442
Score = 354 (129.7 bits), Expect = 6.6e-32, P = 6.6e-32
Identities = 84/231 (36%), Positives = 136/231 (58%)
Query: 186 TLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNY 245
++++DG + E ++ D F +Y G ++RGYL YGPPGTGKSS I+A+A++ Y
Sbjct: 210 SVILDGRICEELVEDFQEFISSATWYADRGVPYRRGYLFYGPPGTGKSSFISALASHFGY 269
Query: 246 DIYNLNLSVVT-SDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRG-P 303
+ L+LS T D L +LL P S++++EDID + +RE + PA Y+G
Sbjct: 270 SVCLLSLSERTLDDDRLNHLLNTAPPNSVVILEDIDAAFV--SREDPMSNHPA--YQGLS 325
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQ 363
+VT +GLLNA+DG+ C +E++T TTNY +R+DPAL+R GR+DR T +
Sbjct: 326 RVTFSGLLNALDGV--ACAEERLTFMTTNYVERLDPALIRPGRVDRKQYFGNATDGMLSK 383
Query: 364 LAAN-YLDINDHDLYCH-IEKLME-KVKVSPAEVAGE-LMKAKGSKTSLED 410
+ + Y +D L ++++ E K ++SPA + G LM + + +L++
Sbjct: 384 MFSRFYRQPSDSVLADEFVKRVSEHKTELSPAMIQGHFLMYKQDPRAALDN 434
>ASPGD|ASPL0000041452 [details] [associations]
symbol:AN3131 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001306 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EnsemblFungi:CADANIAT00009943 Uniprot:C8VII7
Length = 497
Score = 342 (125.4 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 75/176 (42%), Positives = 111/176 (63%)
Query: 183 TFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANY 242
T ++++D +KE ++ D+ F + +Y G ++RGYLLYGPPGTGKSS I A+A
Sbjct: 248 TLDSVILDKGVKERIVEDVKDFLATESWYHDRGIPYRRGYLLYGPPGTGKSSFIQAVAGE 307
Query: 243 MNYDIYNLNLSVV-TSDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYR 301
++YDI LNLS +D L LL VP R+++++ED+D + NR +Q DE D YR
Sbjct: 308 LDYDIAILNLSERGMTDDRLNRLLTIVPKRTLVLLEDVDAAFS--NRRTQT-DE--DGYR 362
Query: 302 GPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCT 357
G VT +GLLNA+DG+ +E+I TTN+ +R+D AL+R GR+D + + T
Sbjct: 363 GANVTFSGLLNALDGV--ASAEERIVFLTTNHVERLDEALVRPGRVDMTVRIGELT 416
>DICTYBASE|DDB_G0289135 [details] [associations]
symbol:bcs1lA "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0289135 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0005743 GenomeReviews:CM000154_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0051131 EMBL:AAFI02000130 RefSeq:XP_636375.1
EnsemblProtists:DDB0266725 GeneID:8626976 KEGG:ddi:DDB_G0289135
OMA:FITNESW InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 Uniprot:Q54HY8
Length = 421
Score = 324 (119.1 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 87/288 (30%), Positives = 154/288 (53%)
Query: 115 DINSTSHFETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRFHTIRHDRWSSS 174
D+ + + FE+ + +K + +L+ + L+ + +D + V + + W
Sbjct: 122 DMGAGAPFES--ISISTYKSNAQLINQ--LLQEAMTLSLNRDIGKTVIYINGGNGNWERF 177
Query: 175 GVNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSS 234
G N + ++++ DLK ++ D+ F + +YR G ++RGYLLYG PG GKSS
Sbjct: 178 G-NPRSIRSLSSVILADDLKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSS 236
Query: 235 LIAAMANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKG 293
LI A+A +N DI ++LS D + +LL + P +SIL++EDID + K +R++
Sbjct: 237 LINAIAGELNLDICIVSLSSKDIDDKQINHLLNNAPPKSILLIEDIDAAFK-SHRDNVDS 295
Query: 294 DEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
+ +S +T +GLLNA+DG+ G +I TTN + +D AL+R GR+D I +
Sbjct: 296 NNN-NSNNNNSLTYSGLLNALDGVASQEG--RILFMTTNKIELLDSALIREGRIDLKIKV 352
Query: 354 SYCTFSTFKQLAANYLDI-NDHDLYCHIEKLMEKVKVSPAEVAGELMK 400
S T S QL ++ ++ D+ L + + ++S +++ G L+K
Sbjct: 353 SNATKSQAAQLFTHFYNLPTDNQLAIRFSENLHDHQLSMSQIQGFLLK 400
>FB|FBgn0032195 [details] [associations]
symbol:CG4908 species:7227 "Drosophila melanogaster"
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW GeneTree:ENSGT00390000005415
EMBL:AY089691 RefSeq:NP_609358.1 RefSeq:NP_723532.1 UniGene:Dm.383
SMR:Q9VL22 STRING:Q9VL22 EnsemblMetazoa:FBtr0079949
EnsemblMetazoa:FBtr0079950 GeneID:34360 KEGG:dme:Dmel_CG4908
UCSC:CG4908-RA FlyBase:FBgn0032195 InParanoid:Q9VL22
OrthoDB:EOG40CFZ9 GenomeRNAi:34360 NextBio:788111 Uniprot:Q9VL22
Length = 431
Score = 322 (118.4 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 79/222 (35%), Positives = 123/222 (55%)
Query: 185 GTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMN 244
G++V+D + ++ D F + +Y + G ++RGYLLYGPPG GKSS I A+A +
Sbjct: 190 GSVVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGELE 249
Query: 245 YDIYNLNLSVV-TSDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRG- 302
Y + LNLS +D L +LL P +SI+++EDID + +RE+ + A + G
Sbjct: 250 YSVCLLNLSERGLTDDRLNHLLNVAPEQSIILLEDIDAAFV--SREATPQQKSA--FDGL 305
Query: 303 PQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFK 362
++T +GLLN +DG+ + +I TTNY DR+DPAL+R GR+D + YCT +
Sbjct: 306 NRITFSGLLNCLDGVGST--EARIVFMTTNYIDRLDPALVRPGRIDLKEYIGYCTQYQLE 363
Query: 363 QLAANYLDINDHDLYCHIEKLMEKV--KVSPAEVAGELMKAK 402
++ N+ +D K + SPA++ G MK K
Sbjct: 364 EMFKNFFASSDTTKAEEFGKRVNSFGRSASPAQIQGFFMKHK 405
>MGI|MGI:1914071 [details] [associations]
symbol:Bcs1l "BCS1-like (yeast)" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=ISO]
[GO:0033617 "mitochondrial respiratory chain complex IV assembly"
evidence=ISO] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1914071 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617
EMBL:AK012324 EMBL:AK078925 EMBL:AK079385 EMBL:BC019781
IPI:IPI00112986 RefSeq:NP_080060.1 UniGene:Mm.358700
ProteinModelPortal:Q9CZP5 SMR:Q9CZP5 STRING:Q9CZP5
PhosphoSite:Q9CZP5 PaxDb:Q9CZP5 PRIDE:Q9CZP5 DNASU:66821
Ensembl:ENSMUST00000027358 Ensembl:ENSMUST00000113732
Ensembl:ENSMUST00000113733 GeneID:66821 KEGG:mmu:66821
UCSC:uc007bmq.1 InParanoid:Q9CZP5 NextBio:322735 Bgee:Q9CZP5
CleanEx:MM_BCS1L Genevestigator:Q9CZP5
GermOnline:ENSMUSG00000026172 Uniprot:Q9CZP5
Length = 418
Score = 313 (115.2 bits), Expect = 2.3e-27, P = 2.3e-27
Identities = 91/309 (29%), Positives = 160/309 (51%)
Query: 103 FQGVTMKWKFNSDINSTS-HFETRWYELKFHKMHTELVKKKYLVHVLEMAKMF---KDRN 158
+QG ++ + N D+ T W + F + T+ +K ++LE A+ ++
Sbjct: 108 YQGKWIRVERNRDMQMVDLQTGTPWESVTFTALGTD---RKVFFNILEEARALALQQEEG 164
Query: 159 RIVRFHTIRHDRWSSSGV-NLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKV 217
+ V + + + W + G P+ ++V+ L + ++ D+ F ++Y G
Sbjct: 165 KTVMYTAVGSE-WRTFGYPRRRRPLD--SVVLQQGLADRIVKDIREFIDNPKWYIDRGIP 221
Query: 218 WKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVV 276
++RGYLLYGPPG GKSS I A+A + + I L+L+ + SD L +LL P +S++++
Sbjct: 222 YRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLL 281
Query: 277 EDIDCSIKLQNRESQKGDEPADSYRG-PQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKD 335
ED+D + +R+ + P Y+G ++T +GLLNA+DG+ + +I TTNY D
Sbjct: 282 EDVDAAFL--SRDLAV-ENPI-KYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNYID 335
Query: 336 RIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCHIEKLMEKV--KVSPAE 393
R+DPAL+R GR+D + YC+ Q+ + L + + + K ++SPA+
Sbjct: 336 RLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAENFAEHVLKATSEISPAQ 395
Query: 394 VAGELMKAK 402
V G M K
Sbjct: 396 VQGYFMLYK 404
>UNIPROTKB|E2RE50 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IEA] [GO:0033617 "mitochondrial
respiratory chain complex IV assembly" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 GO:GO:0034551 GO:GO:0033617
EMBL:AAEX03018156 RefSeq:XP_536070.1 Ensembl:ENSCAFT00000023625
GeneID:478911 KEGG:cfa:478911 NextBio:20854180 Uniprot:E2RE50
Length = 419
Score = 310 (114.2 bits), Expect = 4.9e-27, P = 4.9e-27
Identities = 86/287 (29%), Positives = 151/287 (52%)
Query: 124 TRWYELKFHKMHTELVKKKYLVHVLEMAK---MFKDRNRIVRFHTIRHDRWSSSGV-NLD 179
T W + F + T+ +K ++LE A+ + ++ + V + T W G
Sbjct: 130 TPWESVTFTALGTD---RKVFFNILEEARELALQQEEGKTVMY-TAMGSEWRPFGYPRRR 185
Query: 180 HPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAM 239
P+T ++V+ L + ++ D+ F ++Y G ++RGYLLYGPPG GKSS I A+
Sbjct: 186 RPLT--SVVLGQGLADRIVRDVREFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITAL 243
Query: 240 ANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
A + + I L+L+ + SD L +LL P +S++++ED+D + ++ ++ P
Sbjct: 244 AGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAEN---PV- 299
Query: 299 SYRG-PQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCT 357
Y+G ++T +GLLNA+DG+ + +I TTN+ DR+DPAL+R GR+D + YC+
Sbjct: 300 KYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDMKEYVGYCS 357
Query: 358 FSTFKQLAANYLDINDHDLY-CHIEKLME-KVKVSPAEVAGELMKAK 402
Q+ + L ++++ ++SPA+V G M K
Sbjct: 358 HWQLTQMFQRFYPGQAPSLAEAFAGRVLQVTTQISPAQVQGYFMLYK 404
>SGD|S000002783 [details] [associations]
symbol:BCS1 "Protein translocase and chaperone required for
Complex III assembly" species:4932 "Saccharomyces cerevisiae"
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0008320 "protein
transmembrane transporter activity" evidence=IMP] [GO:0032979
"protein insertion into mitochondrial membrane from inner side"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051131 "chaperone-mediated protein complex assembly"
evidence=IMP;IPI] Reactome:REACT_85873 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000002783
GO:GO:0016021 GO:GO:0005829 GO:GO:0005524 GO:GO:0005743
GO:GO:0005758 EMBL:BK006938 GO:GO:0016887 Reactome:REACT_118590
EMBL:U28373 eggNOG:COG0465 GO:GO:0051131 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
GO:GO:0034551 OrthoDB:EOG4XWK6J EMBL:S47190 PIR:S61170
RefSeq:NP_010663.1 ProteinModelPortal:P32839 SMR:P32839
IntAct:P32839 STRING:P32839 PaxDb:P32839 EnsemblFungi:YDR375C
GeneID:851981 KEGG:sce:YDR375C CYGD:YDR375c NextBio:970127
Genevestigator:P32839 GermOnline:YDR375C GO:GO:0008320
GO:GO:0032979 Uniprot:P32839
Length = 456
Score = 319 (117.4 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 81/226 (35%), Positives = 128/226 (56%)
Query: 136 TELVKKKYLVH-VLEMAK--MFKDRNRIVRFHTIRHDRWSSSGVNLDHPMTFGTLVMDGD 192
T L + K+L +L AK K +T W G M ++++D
Sbjct: 175 TTLYRDKHLFDDILNEAKDIALKTTEGKTVIYTSFGPEWRKFGQPKAKRM-LPSVILDSG 233
Query: 193 LKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNL 252
+KE +L+D+ F + ++Y G ++RGYLLYGPPG+GK+S I A+A ++Y+I LNL
Sbjct: 234 IKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNL 293
Query: 253 SVVT-SDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLL 311
S +D L +L+ ++P RSIL++EDID + N+ SQ G++ S VT +GLL
Sbjct: 294 SENNLTDDRLNHLMNNMPERSILLLEDIDAAF---NKRSQTGEQGFHS----SVTFSGLL 346
Query: 312 NAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCT 357
NA+DG+ +E IT TTN+ +++D A++R GR+D + + T
Sbjct: 347 NALDGVTS--SEETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNAT 390
>DICTYBASE|DDB_G0286765 [details] [associations]
symbol:DDB_G0286765 "BCS1-like protein" species:44689
"Dictyostelium discoideum" [GO:0034551 "mitochondrial respiratory
chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0286765 GO:GO:0005524 EMBL:AAFI02000089
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 RefSeq:XP_637666.1
ProteinModelPortal:Q54L95 EnsemblProtists:DDB0229898 GeneID:8625806
KEGG:ddi:DDB_G0286765 InParanoid:Q54L95 OMA:SISIMNM Uniprot:Q54L95
Length = 574
Score = 324 (119.1 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 78/232 (33%), Positives = 125/232 (53%)
Query: 186 TLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNY 245
++ +D ++ E V+NDL F GK++Y G ++RGYLLYGPPG+GK+S I +MA
Sbjct: 249 SVFLDENISEKVVNDLTNFIHGKKWYTDTGVPYRRGYLLYGPPGSGKTSFILSMAGNFGK 308
Query: 246 DIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQV 305
I +N+S D ++ ++ +ILV+EDID + S G++ +
Sbjct: 309 SISIMNMSKGIHDGNIHSIIQKCNKDTILVLEDIDAVFVKRKNNSAAGNDV--------L 360
Query: 306 TLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLA 365
T +GLLNAIDGL D +I + TTN+ +R+ PAL+R GR+D + Y + + +
Sbjct: 361 TFSGLLNAIDGL--ASSDGRILMMTTNHLERLSPALIRPGRIDLKVKFDYASNHQIELMF 418
Query: 366 ANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELMKAKGSKTSL----EDFIT 413
+ D H L I +E ++S A++ G + + S +L +DFIT
Sbjct: 419 KRFFDQKYHYLIDSINSKLENHQISTAQLQGWFIIHRNSPLNLLPTCDDFIT 470
>ZFIN|ZDB-GENE-040426-938 [details] [associations]
symbol:bcs1l "BCS1-like (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-040426-938
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465
GO:GO:0017111 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 EMBL:AY394959 EMBL:BC045990
IPI:IPI00495335 RefSeq:NP_957476.2 UniGene:Dr.80335
ProteinModelPortal:Q7ZV60 STRING:Q7ZV60 PRIDE:Q7ZV60
Ensembl:ENSDART00000022246 GeneID:394157 KEGG:dre:394157
InParanoid:Q7ZV60 NextBio:20815107 ArrayExpress:Q7ZV60 Bgee:Q7ZV60
Uniprot:Q7ZV60
Length = 420
Score = 307 (113.1 bits), Expect = 3.1e-26, P = 3.1e-26
Identities = 86/290 (29%), Positives = 150/290 (51%)
Query: 121 HFETRWYELKFHKMHTELVKKKYLVHVLEMAK---MFKDRNRIVRFHTIRHDRWSSSGV- 176
H T W + F + + ++ ++L+ A+ + ++ R V + T W G
Sbjct: 127 HTGTPWESVTFTALGRD---RQTFFNILQEARELALKQEEGRTVMY-TAMGAEWRPFGFP 182
Query: 177 NLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLI 236
P++ ++V++ + E +++D+ F ++Y G ++RGYLLYGPPG GKSS I
Sbjct: 183 RRRRPLS--SVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFI 240
Query: 237 AAMANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDE 295
A+A + Y I ++LS + SD L +LL P +SI+++ED+D + +RE +
Sbjct: 241 TALAGELGYSICLMSLSDRSLSDDRLNHLLSVAPQQSIILLEDVDAAFV--SRELLPTEN 298
Query: 296 PADSYRGP-QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLS 354
P +Y+G ++T +GLLNA+DG+ + +I TTN+ +R+DPAL+R GR+D +
Sbjct: 299 PL-AYQGMGRLTFSGLLNALDGV--ASSEARIVFMTTNFIERLDPALVRPGRVDLKQYVG 355
Query: 355 YCTFSTFKQLAANYLDINDHDLYCHIEK--LMEKVKVSPAEVAGELMKAK 402
+C+ Q+ + H + L +S A+V G M K
Sbjct: 356 HCSHWQLTQMFRRFYPQESAAEADHFSEQALAAHTDLSAAQVQGHFMLYK 405
>DICTYBASE|DDB_G0291910 [details] [associations]
symbol:bcs1lB "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0291910
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005743 GO:GO:0016887 EMBL:AAFI02000186 eggNOG:COG0465
GO:GO:0051131 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 RefSeq:XP_629907.1 STRING:Q54DY9
EnsemblProtists:DDB0266726 GeneID:8628408 KEGG:ddi:DDB_G0291910
KO:K08900 OMA:RDKSYQW Uniprot:Q54DY9
Length = 458
Score = 222 (83.2 bits), Expect = 4.8e-26, Sum P(2) = 4.8e-26
Identities = 59/167 (35%), Positives = 92/167 (55%)
Query: 149 EMAKMFKDRNRIVRFHTIRHDRWSSSGVNLDHPMT---FGTLVMDGDLKETVLNDLDCFR 205
EMA + K+ + + + ++ D W G HP ++++D E ++ D+ F
Sbjct: 174 EMA-LEKEEGKTLIYTSMGTD-WRRFG----HPRRKRPISSVILDKGKSELIIQDVKKFL 227
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVT-SDSSLEYL 264
++Y G ++RGYLLYGPPGTGKSS I A+A + I LNL+ + SD+SL L
Sbjct: 228 NNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSDTSLNQL 287
Query: 265 LLHVPNRSILVVEDIDCSIKLQNRE-SQKGDEPADSYRGPQVTLAGL 310
L P RSI+++EDID +I+ N + S K ++S P ++ GL
Sbjct: 288 LATAPQRSIILLEDIDSAIQTGNHDLSAK----SNSANAPSISSGGL 330
Score = 146 (56.5 bits), Expect = 4.8e-26, Sum P(2) = 4.8e-26
Identities = 37/114 (32%), Positives = 59/114 (51%)
Query: 296 PADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSY 355
P+ S G +T +GLLNA+DG+ G +I TTN+ +++D L+R GR+D I +
Sbjct: 339 PSVSSGGSALTFSGLLNALDGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIGL 396
Query: 356 CTFSTFKQLAANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELMKAKGSKTSLE 409
C+ +Q+ + D DL + +E K SPA++ M S S+E
Sbjct: 397 CSSYQMEQMFLKFYP-TDFDLAKQFVEKLENYKFSPAQLQAYFMTY--SNNSIE 447
>RGD|1359658 [details] [associations]
symbol:Bcs1l "BC1 (ubiquinol-cytochrome c reductase)
synthesis-like" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0007005
"mitochondrion organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly"
evidence=IEA;ISO] [GO:0033617 "mitochondrial respiratory chain
complex IV assembly" evidence=IEA;ISO] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1359658 GO:GO:0005739 GO:GO:0005524 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0
GO:GO:0034551 GO:GO:0033617 EMBL:CH474004 EMBL:BC083660
IPI:IPI00213929 RefSeq:NP_001007667.1 UniGene:Rn.15293
IntAct:Q5XIM0 STRING:Q5XIM0 Ensembl:ENSRNOT00000022632
GeneID:301514 KEGG:rno:301514 UCSC:RGD:1359658 InParanoid:Q5XIM0
NextBio:648873 Genevestigator:Q5XIM0 Uniprot:Q5XIM0
Length = 418
Score = 305 (112.4 bits), Expect = 6.9e-26, P = 6.9e-26
Identities = 89/309 (28%), Positives = 160/309 (51%)
Query: 103 FQGVTMKWKFNSDINSTS-HFETRWYELKFHKMHTELVKKKYLVHVLEMAKMF---KDRN 158
+QG ++ + N ++ T W + F + T+ +K ++LE A+ ++
Sbjct: 108 YQGKWIRVERNREMQMVDLQTGTPWESVTFTALGTD---RKVFFNILEEARALALQQEEG 164
Query: 159 RIVRFHTIRHDRWSSSGV-NLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKV 217
+ V + + + W + G P+ ++V+ L + ++ D+ F ++Y G
Sbjct: 165 KTVMYTAVGSE-WRTFGYPRRRRPLD--SVVLQQGLADRIVKDIREFIDNPKWYIDRGIP 221
Query: 218 WKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVV 276
++RGYLLYGPPG GKSS I A+A + + I L+L+ + SD L +LL P +S++++
Sbjct: 222 YRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLL 281
Query: 277 EDIDCSIKLQNRESQKGDEPADSYRG-PQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKD 335
ED+D + +R+ + P Y+G ++T +GLLNA+DG+ + +I TTN+ D
Sbjct: 282 EDVDAAFL--SRDLAV-ENPV-KYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHID 335
Query: 336 RIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCHIEKLMEKV--KVSPAE 393
R+DPAL+R GR+D + YC+ Q+ + L + + + K ++SPA+
Sbjct: 336 RLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAENFAEHVLKATSQISPAQ 395
Query: 394 VAGELMKAK 402
V G M K
Sbjct: 396 VQGYFMLYK 404
>POMBASE|SPAC644.07 [details] [associations]
symbol:SPAC644.07 "mitochondrial Rieske ISP assembly
ATPase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
[GO:0043623 "cellular protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC644.07 GO:GO:0016021 GO:GO:0005524 EMBL:CU329670
GO:GO:0005743 GO:GO:0016226 eggNOG:COG0465 GO:GO:0043623
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
KO:K08900 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:D89136 PIR:T42406
RefSeq:NP_593875.1 ProteinModelPortal:Q9P6Q3 STRING:Q9P6Q3
EnsemblFungi:SPAC644.07.1 GeneID:2543663 KEGG:spo:SPAC644.07
OrthoDB:EOG4XWK6J NextBio:20804669 GO:GO:0042623 Uniprot:Q9P6Q3
Length = 449
Score = 312 (114.9 bits), Expect = 7.7e-26, P = 7.7e-26
Identities = 74/250 (29%), Positives = 135/250 (54%)
Query: 165 TIRHDRWSSSGVNLDHPMT---FGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRG 221
T + W++ HP + ++V++ ++K+ + +D+ F R ++Y G ++RG
Sbjct: 185 TTIYTAWATEWKPFGHPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRG 244
Query: 222 YLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVV-TSDSSLEYLLLHVPNRSILVVEDID 280
YLLYGPPG+GK+S + A+A ++YDI LNL+ +D L +LL +VP ++++++ED+D
Sbjct: 245 YLLYGPPGSGKTSFLYALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLLEDVD 304
Query: 281 CSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPA 340
+ + + R + G VT +GLLNA+DG+ DE+I TTN+ +++DPA
Sbjct: 305 SAFQGRERSGEVGFHA-------NVTFSGLLNALDGVTS--SDERIIFMTTNHPEKLDPA 355
Query: 341 LLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELMK 400
L+R GR+D L T +++ + + ++ + ++ S A + G +
Sbjct: 356 LVRPGRVDVKAYLGNATPEQVREMFTRFYG-HSPEMADDLSDIVCPKNTSMASLQGLFVM 414
Query: 401 AKGSKTSLED 410
K S D
Sbjct: 415 NKSSPADAVD 424
>UNIPROTKB|F1P1Q6 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
GeneTree:ENSGT00390000005415 EMBL:AADN02016784 IPI:IPI00819859
PRIDE:F1P1Q6 Ensembl:ENSGALT00000038219 Uniprot:F1P1Q6
Length = 419
Score = 305 (112.4 bits), Expect = 8.6e-26, P = 8.6e-26
Identities = 89/290 (30%), Positives = 151/290 (52%)
Query: 124 TRWYELKFHKMHTELVKKKYLVHVLEMAK---MFKDRNRIVRFHTIRHDRWSSSGV-NLD 179
T W + F + T ++ ++L+ A+ + + R + + T W G
Sbjct: 130 TAWESVTFTALGTN---REIFFNILQEARELALQQQEGRTIMY-TAMGTEWRQFGFPRRR 185
Query: 180 HPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAM 239
P++ ++V++ + E ++ D+ F ++Y + G ++RGYLLYGPPG GKSS I A+
Sbjct: 186 RPLS--SVVLEKGVSERLVEDVKEFIDNPKWYIERGIPYRRGYLLYGPPGCGKSSFITAL 243
Query: 240 ANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
A + + I L+LS + SD L YLL P +SI+++ED+D + ++ ++ PA
Sbjct: 244 AGELQHSICLLSLSDRSLSDDRLNYLLSVAPQQSIILLEDVDAAFVSRDLAAEN---PA- 299
Query: 299 SYRGP-QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCT 357
Y+G ++T +GLLNA+DG+ + +I TTNY DR+DPAL+R GR+D + +C+
Sbjct: 300 MYQGMGRLTFSGLLNALDGVAST--EARIVFMTTNYVDRLDPALVRPGRVDLKQYVGHCS 357
Query: 358 FSTFKQLAANYLDINDHDLYCHIEKLMEKV-----KVSPAEVAGELMKAK 402
QLA + E+ E+ ++S A+V G M K
Sbjct: 358 RG---QLARMFQRFYPEQPPAAAERFAEQALAVSKQISAAQVQGHFMLYK 404
>UNIPROTKB|Q9Y276 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IMP] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IMP] [GO:0005750 "mitochondrial
respiratory chain complex III" evidence=TAS] Reactome:REACT_17015
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 EMBL:CH471063 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 HOGENOM:HOG000198799 HOVERGEN:HBG048759
OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617 EMBL:AF026849
EMBL:AF346835 EMBL:AF516670 EMBL:AF038195 EMBL:AK096210
EMBL:BX571752 EMBL:BC000416 EMBL:BC007500 IPI:IPI00003985
RefSeq:NP_001073335.1 RefSeq:NP_001244271.1 RefSeq:NP_001244272.1
RefSeq:NP_001244273.1 RefSeq:NP_004319.1 UniGene:Hs.471401
ProteinModelPortal:Q9Y276 SMR:Q9Y276 IntAct:Q9Y276
MINT:MINT-1433080 STRING:Q9Y276 PhosphoSite:Q9Y276 DMDM:46397351
PaxDb:Q9Y276 PeptideAtlas:Q9Y276 PRIDE:Q9Y276 DNASU:617
Ensembl:ENST00000359273 Ensembl:ENST00000392109
Ensembl:ENST00000392110 Ensembl:ENST00000392111
Ensembl:ENST00000412366 Ensembl:ENST00000431802
Ensembl:ENST00000439945 GeneID:617 KEGG:hsa:617 UCSC:uc002vip.3
GeneCards:GC02P219523 HGNC:HGNC:1020 HPA:HPA037700 HPA:HPA037701
MIM:124000 MIM:262000 MIM:603358 MIM:603647 neXtProt:NX_Q9Y276
Orphanet:123 Orphanet:53693 Orphanet:1460 Orphanet:255249
Orphanet:254902 PharmGKB:PA25327 InParanoid:Q9Y276 PhylomeDB:Q9Y276
GenomeRNAi:617 NextBio:2497 ArrayExpress:Q9Y276 Bgee:Q9Y276
CleanEx:HS_BCS1L Genevestigator:Q9Y276 GermOnline:ENSG00000074582
GO:GO:0005750 Uniprot:Q9Y276
Length = 419
Score = 305 (112.4 bits), Expect = 8.6e-26, P = 8.6e-26
Identities = 86/287 (29%), Positives = 151/287 (52%)
Query: 124 TRWYELKFHKMHTELVKKKYLVHVLEMAK---MFKDRNRIVRFHTIRHDRWSSSGV-NLD 179
T W + F + T+ +K ++LE A+ + ++ + V + + + W G
Sbjct: 130 TPWESVTFTALGTD---RKVFFNILEEARELALQQEEGKTVMYTAVGSE-WRPFGYPRRR 185
Query: 180 HPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAM 239
P+ ++V+ L + ++ D+ F ++Y G ++RGYLLYGPPG GKSS I A+
Sbjct: 186 RPLN--SVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITAL 243
Query: 240 ANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
A + + I L+L+ + SD L +LL P +S++++ED+D + +R+ + P
Sbjct: 244 AGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFL--SRDLAV-ENPV- 299
Query: 299 SYRG-PQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCT 357
Y+G ++T +GLLNA+DG+ + +I TTN+ DR+DPAL+R GR+D + YC+
Sbjct: 300 KYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCS 357
Query: 358 FSTFKQLAANYLDINDHDLYCHI-EKLMEKV-KVSPAEVAGELMKAK 402
Q+ + L + E ++ ++SPA+V G M K
Sbjct: 358 HWQLTQMFQRFYPGQAPSLAENFAEHVLRATNQISPAQVQGYFMLYK 404
>UNIPROTKB|G4MYI1 [details] [associations]
symbol:MGG_10383 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003713408.1 ProteinModelPortal:G4MYI1
EnsemblFungi:MGG_10383T0 GeneID:2681994 KEGG:mgr:MGG_10383
Uniprot:G4MYI1
Length = 494
Score = 312 (114.9 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 71/196 (36%), Positives = 115/196 (58%)
Query: 164 HTIRHDRWSSSGV-NLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGY 222
+ I+ W+ G+ P+ ++V + LKE ++ D+ F ++Y G ++R Y
Sbjct: 218 YNIQGMSWAQLGLPRRKRPLA--SVVFEKGLKEAIVEDVQDFLSRHQWYADRGIPYRRTY 275
Query: 223 LLYGPPGTGKSSLIAAMANYMNYDIYNLNL-SVVTSDSSLEYLLLHVPNRSILVVEDIDC 281
LL+GPPG+GKSS I A+A ++Y++ +NL +D L +L+ +P RSIL++ED+D
Sbjct: 276 LLHGPPGSGKSSFIHALAGELDYNLAIVNLVERGLTDDKLANMLMRLPPRSILLLEDVD- 334
Query: 282 SIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPAL 341
+ NR+ P D Y G VT +GLLN +DG+ G+++I TTNY +R+DPAL
Sbjct: 335 -VAFGNRQEMS---P-DGYSGATVTYSGLLNVLDGM--AAGEDRIAFLTTNYVERLDPAL 387
Query: 342 LRAGRMDRHINLSYCT 357
+R GR+D + + T
Sbjct: 388 IRPGRVDVKVRVGEAT 403
>UNIPROTKB|I3LFK0 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 Ensembl:ENSSSCT00000027544
Uniprot:I3LFK0
Length = 419
Score = 301 (111.0 bits), Expect = 4.7e-25, P = 4.7e-25
Identities = 84/287 (29%), Positives = 149/287 (51%)
Query: 124 TRWYELKFHKMHTELVKKKYLVHVLEMAK---MFKDRNRIVRFHTIRHDRWSSSGV-NLD 179
T W + F + T+ +K ++LE A+ + ++ + V + + + W G
Sbjct: 130 TPWESVTFTALGTD---RKIFFNILEEARELALQQEEGKTVMYTAVGSE-WRPFGYPRRR 185
Query: 180 HPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAM 239
P+ ++V++ L + ++ D+ F ++Y G ++RGYLLYGPPG GKSS I A+
Sbjct: 186 RPLN--SVVLEQGLADRIVRDIREFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITAL 243
Query: 240 ANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
A + + I L+L+ + SD L +LL P +S++++ED+D + ++ ++ P
Sbjct: 244 AGELQHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAEN---PV- 299
Query: 299 SYRG-PQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCT 357
Y+G ++T +GLLNA+DG+ + +I TTN+ DR+DPAL+R GR+D + +C+
Sbjct: 300 KYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGHCS 357
Query: 358 FSTFKQLAANYLDINDHDLYCHI--EKLMEKVKVSPAEVAGELMKAK 402
Q+ + L L ++SPA+V G M K
Sbjct: 358 RWQLTQMFQRFYPGQAPSLAESFADRALQATTQISPAQVQGYFMLYK 404
>UNIPROTKB|E1BWG5 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 EMBL:AADN02016784 IPI:IPI00579056
Ensembl:ENSGALT00000018571 Uniprot:E1BWG5
Length = 420
Score = 301 (111.0 bits), Expect = 5.2e-25, P = 5.2e-25
Identities = 90/291 (30%), Positives = 151/291 (51%)
Query: 124 TRWYELKFHKMHTELVKKKYLVHVLEMAK---MFKDRNRIVRFHTIRHDRWSSSGV-NLD 179
T W + F + T ++ ++L+ A+ + + R + + T W G
Sbjct: 130 TAWESVTFTALGTN---REIFFNILQEARELALQQQEGRTIMY-TAMGTEWRQFGFPRRR 185
Query: 180 HPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKV-WKRGYLLYGPPGTGKSSLIAA 238
P++ ++V++ + E ++ D+ F ++Y + GK +RGYLLYGPPG GKSS I A
Sbjct: 186 RPLS--SVVLEKGVSERLVEDVKEFIDNPKWYIERGKAPVRRGYLLYGPPGCGKSSFITA 243
Query: 239 MANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPA 297
+A + + I L+LS + SD L YLL P +SI+++ED+D + ++ ++ PA
Sbjct: 244 LAGELQHSICLLSLSDRSLSDDRLNYLLSVAPQQSIILLEDVDAAFVSRDLAAEN---PA 300
Query: 298 DSYRGP-QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYC 356
Y+G ++T +GLLNA+DG+ + +I TTNY DR+DPAL+R GR+D + +C
Sbjct: 301 -MYQGMGRLTFSGLLNALDGVAST--EARIVFMTTNYVDRLDPALVRPGRVDLKQYVGHC 357
Query: 357 TFSTFKQLAANYLDINDHDLYCHIEKLMEKV-----KVSPAEVAGELMKAK 402
+ QLA + E+ E+ ++S A+V G M K
Sbjct: 358 SRG---QLARMFQRFYPEQPPAAAERFAEQALAVSKQISAAQVQGHFMLYK 405
>GENEDB_PFALCIPARUM|PFF0155w [details] [associations]
symbol:PFF0155w "bcs1-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0006461
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:AL844505
RefSeq:XP_966022.1 ProteinModelPortal:C6KSN2
EnsemblProtists:PFF0155w:mRNA GeneID:3885965 KEGG:pfa:PFF0155w
EuPathDB:PlasmoDB:PF3D7_0603200 ProtClustDB:CLSZ2429496
Uniprot:C6KSN2
Length = 471
Score = 300 (110.7 bits), Expect = 6.2e-25, Sum P(2) = 6.2e-25
Identities = 79/289 (27%), Positives = 147/289 (50%)
Query: 133 KMHTELVKKKYLVHVLEMAKMF---KDRNRIVRFHTIRHDRWSSSGVNLDHPMTFGTLVM 189
K+ T + K +L AK++ K+ + + + + + W G N + ++++
Sbjct: 164 KLSTFIWSKYVFEKILNDAKVYIEKKEEGKTLVYKSFGPE-WRPFG-NPKNKRPINSVIL 221
Query: 190 DGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYN 249
+L E ++ND+ F ++Y G ++R YLL+GPPG GKSSLI A+A Y +++I
Sbjct: 222 PENLNEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKSSLITALAGYFDFNICT 281
Query: 250 LNLS-VVTSDSSLEYLLLHVPNRSILVVEDIDCS------IKLQNRESQKGDEPADSYRG 302
+N++ + +D +LL +P ++IL++EDID +K N + Q + + G
Sbjct: 282 ININDIYLTDDRFIHLLATIPPKTILILEDIDFIFINDPIMKYTNND-QNSSSNSSIFTG 340
Query: 303 PQ---------VTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
V+ +GLLNA+DG++ +E+I TTN +++ P L+R GR+D I +
Sbjct: 341 TNNHSTIKTLGVSYSGLLNALDGIVAT--EERIIFMTTNNIEKLPPTLIRPGRVDMKILI 398
Query: 354 SYCTFSTFKQLAANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELMKAK 402
Y +K++ + H+L K+ + +S AE+ + +K
Sbjct: 399 PYANIYQYKKMFLRFFP-EHHELSNKFAKIFQDFNLSMAEIQSFFLFSK 446
Score = 46 (21.3 bits), Expect = 6.2e-25, Sum P(2) = 6.2e-25
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 81 GKNENVRNFTYGLERNSEIVD-VFQGVTMKWKFNSDINSTS 120
G EN +N ++ NS + +F+ + FN+ + S
Sbjct: 12 GLGENEKNINLSIDENSGFFESIFKNIRKNEYFNAGVGIIS 52
>UNIPROTKB|C6KSN2 [details] [associations]
symbol:PFF0155w "Bcs1 protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0006461 GO:GO:0016887 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EMBL:AL844505 RefSeq:XP_966022.1
ProteinModelPortal:C6KSN2 EnsemblProtists:PFF0155w:mRNA
GeneID:3885965 KEGG:pfa:PFF0155w EuPathDB:PlasmoDB:PF3D7_0603200
ProtClustDB:CLSZ2429496 Uniprot:C6KSN2
Length = 471
Score = 300 (110.7 bits), Expect = 6.2e-25, Sum P(2) = 6.2e-25
Identities = 79/289 (27%), Positives = 147/289 (50%)
Query: 133 KMHTELVKKKYLVHVLEMAKMF---KDRNRIVRFHTIRHDRWSSSGVNLDHPMTFGTLVM 189
K+ T + K +L AK++ K+ + + + + + W G N + ++++
Sbjct: 164 KLSTFIWSKYVFEKILNDAKVYIEKKEEGKTLVYKSFGPE-WRPFG-NPKNKRPINSVIL 221
Query: 190 DGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYN 249
+L E ++ND+ F ++Y G ++R YLL+GPPG GKSSLI A+A Y +++I
Sbjct: 222 PENLNEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKSSLITALAGYFDFNICT 281
Query: 250 LNLS-VVTSDSSLEYLLLHVPNRSILVVEDIDCS------IKLQNRESQKGDEPADSYRG 302
+N++ + +D +LL +P ++IL++EDID +K N + Q + + G
Sbjct: 282 ININDIYLTDDRFIHLLATIPPKTILILEDIDFIFINDPIMKYTNND-QNSSSNSSIFTG 340
Query: 303 PQ---------VTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
V+ +GLLNA+DG++ +E+I TTN +++ P L+R GR+D I +
Sbjct: 341 TNNHSTIKTLGVSYSGLLNALDGIVAT--EERIIFMTTNNIEKLPPTLIRPGRVDMKILI 398
Query: 354 SYCTFSTFKQLAANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELMKAK 402
Y +K++ + H+L K+ + +S AE+ + +K
Sbjct: 399 PYANIYQYKKMFLRFFP-EHHELSNKFAKIFQDFNLSMAEIQSFFLFSK 446
Score = 46 (21.3 bits), Expect = 6.2e-25, Sum P(2) = 6.2e-25
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 81 GKNENVRNFTYGLERNSEIVD-VFQGVTMKWKFNSDINSTS 120
G EN +N ++ NS + +F+ + FN+ + S
Sbjct: 12 GLGENEKNINLSIDENSGFFESIFKNIRKNEYFNAGVGIIS 52
>UNIPROTKB|Q5E9H5 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9913
"Bos taurus" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
eggNOG:COG0465 GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW EMBL:BT020945 EMBL:BC103135 IPI:IPI00713658
RefSeq:NP_001015671.1 UniGene:Bt.5278 ProteinModelPortal:Q5E9H5
STRING:Q5E9H5 Ensembl:ENSBTAT00000004967 GeneID:539713
KEGG:bta:539713 CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 InParanoid:Q5E9H5
OrthoDB:EOG4TTGJ0 NextBio:20878172 GO:GO:0034551 GO:GO:0033617
Uniprot:Q5E9H5
Length = 419
Score = 300 (110.7 bits), Expect = 7.3e-25, P = 7.3e-25
Identities = 83/287 (28%), Positives = 154/287 (53%)
Query: 124 TRWYELKFHKMHTELVKKKYLVHVLEMAK---MFKDRNRIVRFHTIRHDRWSSSGV-NLD 179
T W + F + T+ +K ++LE A+ + ++ + V + + + W G
Sbjct: 130 TPWESVTFTALGTD---RKVFFNILEEARELALQQEEGKTVMYTAVGSE-WRPFGYPRRR 185
Query: 180 HPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAM 239
P+ ++V++ + E ++ D+ F ++Y G ++RGYLLYGPPG GKSS I A+
Sbjct: 186 RPLN--SVVLEQGVTERIVRDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITAL 243
Query: 240 ANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
A + + I L+L+ + SD L +LL P +S++++ED+D + ++ ++ P
Sbjct: 244 AGELQHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAEN---PI- 299
Query: 299 SYRG-PQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCT 357
Y+G ++T +GLLNA+DG+ + +I TTN+ DR+DPAL+R GR+D + +C+
Sbjct: 300 KYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHCS 357
Query: 358 FSTFKQLAANYLDINDHDLYCHI-EKLMEKV-KVSPAEVAGELMKAK 402
Q+ + L + +++++ ++SPA+V G M K
Sbjct: 358 RWQLTQMFQRFYPGQATSLAENFADRVLQATTQISPAQVQGYFMLYK 404
>ASPGD|ASPL0000063397 [details] [associations]
symbol:AN7549 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AACD01000129 EMBL:BN001304
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_680818.1 ProteinModelPortal:Q5AVY1
EnsemblFungi:CADANIAT00000655 GeneID:2869406 KEGG:ani:AN7549.2
HOGENOM:HOG000165936 OMA:RPLAFIR OrthoDB:EOG4BK8C9 Uniprot:Q5AVY1
Length = 650
Score = 204 (76.9 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 57/173 (32%), Positives = 89/173 (51%)
Query: 147 VLEMAKMF--KDRNRIV--RFHTI-RHDRWSSSGVNLDHPMTFGTLVMDGDLKETVLNDL 201
+LE + + KD+N V R H + WS P T+V+D K+ ++D+
Sbjct: 233 LLEAQRYYVAKDKNNTVIYRGHKSGSYTEWSRCMARA--PRALSTVVLDKAQKDAFIDDI 290
Query: 202 DCFR--RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDS 259
+ R + +Y G ++RGYLL+GPPGTGK+SL A A + ++Y LNLS + D
Sbjct: 291 KDYLHPRTRRWYNNRGIPYRRGYLLHGPPGTGKTSLCFAAAGLLGLELYLLNLSSKSLDE 350
Query: 260 S-LEYLLLHVPNRSILVVEDIDCSIKLQNRE--SQKGDEPADSYRGPQVTLAG 309
L L +P R I+++ED+DC+ Q R S D+ +S P++ G
Sbjct: 351 DELMALFTDLPTRCIVLLEDVDCAGMSQKRTPGSSSNDDNGNS-ASPELQEQG 402
Score = 146 (56.5 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 39/103 (37%), Positives = 58/103 (56%)
Query: 305 VTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQL 364
V+L+GLLN IDG+ C G +I V TTN+ +++DPAL+R GR+D I + T S K+L
Sbjct: 422 VSLSGLLNVIDGVAACEG--RILVMTTNHPEKLDPALVRPGRIDLSIAFGHSTTSDIKEL 479
Query: 365 AANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELMKAKGSKTS 407
+ + DL +VSPAE ++A+ +K S
Sbjct: 480 FSAIYSTLEGDL-----------RVSPAERLSPKLRARMAKRS 511
Score = 59 (25.8 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 29/139 (20%), Positives = 62/139 (44%)
Query: 335 DRIDPALLRAGRMDRHINLSYCTFSTFKQLAANY--LDINDHDLYCHIEKLMEKV---KV 389
+R+ P L RA RM + + S+ T ST + + ++ + + E+V +
Sbjct: 497 ERLSPKL-RA-RMAKRSSTSHSTNSTNANVVIHKETRKFSEEQIRLWAAEFAERVPAGEF 554
Query: 390 SPAEVAGELMKAKGS-KTSLEDFITYLXXXXX--XXXXXXTAPPLASNVDGNRPEPQENG 446
+PAE+ G L+ K + ++E+ ++ +A + VDG++ E +
Sbjct: 555 TPAEIQGYLLNHKTDPERAIEEATRWVGEVKEKKAKTKAKSASANTAKVDGDQEEDKREV 614
Query: 447 NNISKSGVQDQSSHTETEA 465
N + G + Q ++ + +A
Sbjct: 615 NGVKNEG-KTQLTNGDAQA 632
Score = 42 (19.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 235 LIAAMANYMNYDIYNL 250
LIAA A Y+ +YNL
Sbjct: 64 LIAATARYIYSQLYNL 79
>UNIPROTKB|G4MXF6 [details] [associations]
symbol:MGG_15496 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
RefSeq:XP_003713293.1 EnsemblFungi:MGG_15496T0 GeneID:12986165
KEGG:mgr:MGG_15496 Uniprot:G4MXF6
Length = 676
Score = 263 (97.6 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 74/235 (31%), Positives = 125/235 (53%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN 251
DL ++N LD R ++Y + G ++RGYLL+GPPGTGK+SL A+A+ ++Y L+
Sbjct: 265 DLIADIINYLDPHTR--DFYHQRGIPYRRGYLLHGPPGTGKTSLSLALASMFKLELYLLH 322
Query: 252 LSVVTSDSSLEYLLLHVPNRSILVVEDIDC-SIKLQN-----------RESQKGDEPADS 299
+ + +D LE + +P R I+++EDID I +N ++ + DE ++
Sbjct: 323 VPSLANDGELESMFDELPPRCIILLEDIDAVGIPRRNELAARMTGLDDKDDDEDDEDEEN 382
Query: 300 YRGP-QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTF 358
G + TL+GLLN +DG+ G +I T+N D++DPAL+R GR+DR I L
Sbjct: 383 GSGRGRSTLSGLLNVLDGVASQEG--RIVFMTSNLADKLDPALVRPGRIDRKIFLGNINQ 440
Query: 359 STFKQLAANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELMKA---KGSKTSLED 410
+ + + +D + + E + +E++G+ A G TSL++
Sbjct: 441 ESARLMFLRMYAESDDSQFADLGPAAE---MEMSELSGQTTPAIISPGPPTSLDE 492
>UNIPROTKB|G4MN83 [details] [associations]
symbol:MGG_02058 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:CM001231 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 RefSeq:XP_003708818.1
EnsemblFungi:MGG_02058T0 GeneID:2681213 KEGG:mgr:MGG_02058
Uniprot:G4MN83
Length = 566
Score = 179 (68.1 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 51/149 (34%), Positives = 81/149 (54%)
Query: 141 KKYLVHVLEMA-KMFKDRNRIVRFHTIR----HDR-WSSSGVNLDHPMTFGTLVMDGDLK 194
K++L H + K D+ I+R +++ HDR W P++ T+V+D + K
Sbjct: 222 KQFLAHARKHHHKDHGDKTLIMRPNSLPQRRFHDRAWREVAKRPVRPIS--TVVLDQEQK 279
Query: 195 ETVLNDLDCFRRGKE--YYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNL 252
VL+D++ + + K +Y G +RGYL +GPPGTGK+SL A+A +IY ++L
Sbjct: 280 TAVLSDMNEYLQPKTECWYSNRGIPLRRGYLFHGPPGTGKTSLSFALAGVFGLEIYVISL 339
Query: 253 -SVVTSDSSLEYLLLHVPNRSILVVEDID 280
SD L L +P R I+++EDID
Sbjct: 340 IEPQLSDEDLSTLFNGLPRRCIVLLEDID 368
Score = 95 (38.5 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 288 RESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRM 347
R + G D +G ++++GLLN IDG+ G +I + TTN + +D AL+R+GR+
Sbjct: 398 RALKVGRGHGDDQKG--ISMSGLLNVIDGVAAHEG--RIFIMTTNKPEILDEALIRSGRV 453
Query: 348 DRHI 351
D +
Sbjct: 454 DLQV 457
Score = 42 (19.8 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 388 KVSPAEVAGELMKAK 402
++SPAE+ G L+K K
Sbjct: 524 QMSPAEIQGFLLKRK 538
>UNIPROTKB|G4NGV5 [details] [associations]
symbol:MGG_04018 "Mitochondrial chaperone BCS1, variant"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:CM001236 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003719831.1 EnsemblFungi:MGG_04018T1 GeneID:2677451
KEGG:mgr:MGG_04018 Uniprot:G4NGV5
Length = 610
Score = 172 (65.6 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 45/129 (34%), Positives = 71/129 (55%)
Query: 155 KDRNRIVRFHTIRHDRWSSSGVNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGK--EYYR 212
+ + ++R H RH W+S PM T+V+D K VL+D++ + + + +Y
Sbjct: 257 RPNSSLIRRHG-RHS-WTSVANRPVRPMN--TVVLDQKQKTAVLSDMNEYLQPETPRWYA 312
Query: 213 KIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNL-SVVTSDSSLEYLLLHVPNR 271
G +RGYL +GPPGTGK+SL A+A DIY ++L S+ L L +P R
Sbjct: 313 NRGIPLRRGYLFHGPPGTGKTSLSFALAGVFGLDIYVVSLLEPQLSEEDLSNLFNCLPRR 372
Query: 272 SILVVEDID 280
++++EDID
Sbjct: 373 CVVLLEDID 381
Score = 104 (41.7 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 292 KGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
KG +D + ++L+GLLNAIDG+ G ++ + TTN + +D AL+R GR+D +
Sbjct: 430 KGGRGSDGEQ-KGISLSGLLNAIDGVASHEG--RVLIMTTNRPESLDDALIRPGRVDLQV 486
Query: 352 NLSYCT 357
S T
Sbjct: 487 AFSNAT 492
Score = 42 (19.8 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 388 KVSPAEVAGELMKA-KGSKTSLED 410
++SPAE+ G L+K K + +L D
Sbjct: 565 QLSPAEIQGFLLKRRKWPRKALRD 588
>UNIPROTKB|H7BZF6 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7BZF6 Ensembl:ENST00000436603 Uniprot:H7BZF6
Length = 121
Score = 199 (75.1 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 48/121 (39%), Positives = 76/121 (62%)
Query: 218 WKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVV 276
++RGYLLYGPPG GKSS I A+A + + I L+L+ + SD L +LL P +S++++
Sbjct: 4 YRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLL 63
Query: 277 EDIDCSIKLQNRESQKGDEPADSYRG-PQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKD 335
ED+D + +R+ + P Y+G ++T +GLLNA+DG+ + +I TTN+ D
Sbjct: 64 EDVDAAFL--SRDLAV-ENPV-KYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVD 117
Query: 336 R 336
R
Sbjct: 118 R 118
>TAIR|locus:2115914 [details] [associations]
symbol:AT4G05340 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004
PROSITE:PS00674 GO:GO:0005524 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016787 eggNOG:COG0465
EMBL:AL161503 HSSP:P28691 IPI:IPI00522068 PIR:B85067
RefSeq:NP_192443.1 UniGene:At.54163 ProteinModelPortal:Q9M0W1
SMR:Q9M0W1 EnsemblPlants:AT4G05340.1 GeneID:825882
KEGG:ath:AT4G05340 TAIR:At4g05340 InParanoid:Q9M0W1
PhylomeDB:Q9M0W1 ArrayExpress:Q9M0W1 Genevestigator:Q9M0W1
Uniprot:Q9M0W1
Length = 96
Score = 194 (73.4 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 38/69 (55%), Positives = 51/69 (73%)
Query: 303 PQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFK 362
PQV+L+GLL +DGL +E+I +FTTN+K+++DPA LR G+MD HI + YCT FK
Sbjct: 25 PQVSLSGLLYFVDGLWSNSVEERIIIFTTNHKEKLDPAFLRPGKMDVHILMDYCTPVVFK 84
Query: 363 QLAANYLDI 371
+L A YLDI
Sbjct: 85 KLDALYLDI 93
>TAIR|locus:2147937 [details] [associations]
symbol:AT5G11140 "AT5G11140" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AL360314
InterPro:IPR007942 Pfam:PF05278 EMBL:AY924835 IPI:IPI00537499
RefSeq:NP_196675.1 UniGene:At.54813 PRIDE:Q9LFP2
EnsemblPlants:AT5G11140.1 GeneID:830982 KEGG:ath:AT5G11140
TAIR:At5g11140 eggNOG:NOG330500 HOGENOM:HOG000153013 OMA:VLEATRY
PhylomeDB:Q9LFP2 ProtClustDB:CLSN2916349 Genevestigator:Q9LFP2
Uniprot:Q9LFP2
Length = 241
Score = 192 (72.6 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 41/117 (35%), Positives = 70/117 (59%)
Query: 461 TETEAADMGNVGGYSVKAEFANIIKAIFSKHGDIAANSCLQSKQCRSSLLEIVCRIIXXX 520
T +++ D+ +VG Y VKA ++ +++IF K+GDI +NS LQS R+ LE + ++
Sbjct: 49 TTSDSWDVVSVGEYKVKASLSSTLQSIFDKYGDITSNSKLQSLSTRTYHLETLAEVVIEL 108
Query: 521 XXXXXXXXXETELKSMLSELQDLESMRLEVGWLRKRLDEIVEAMRLFEL--IAVSEK 575
E+ +L+ + D+E+ ++ VGWLR L+E++EA R F+ +AV EK
Sbjct: 109 QSTPLRRLSESRATEILAIVDDIETAKIRVGWLRSVLEEVLEATRYFDRCEMAVMEK 165
>UNIPROTKB|H7C492 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 GO:GO:0005524
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7C492 Ensembl:ENST00000426649 Uniprot:H7C492
Length = 201
Score = 182 (69.1 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 52/171 (30%), Positives = 93/171 (54%)
Query: 236 IAAMANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGD 294
+ ++A + + I L+L+ + SD L +LL P +S++++ED+D + +R+ +
Sbjct: 22 VLSLAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFL--SRDLAV-E 78
Query: 295 EPADSYRG-PQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
P Y+G ++T +GLLNA+DG+ + +I TTN+ DR+DPAL+R GR+D +
Sbjct: 79 NPV-KYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYV 135
Query: 354 SYCTFSTFKQLAANYLDINDHDLYCHI-EKLMEKV-KVSPAEVAGELMKAK 402
YC+ Q+ + L + E ++ ++SPA+V G M K
Sbjct: 136 GYCSHWQLTQMFQRFYPGQAPSLAENFAEHVLRATNQISPAQVQGYFMLYK 186
>TAIR|locus:2039435 [details] [associations]
symbol:AT2G16900 "AT2G16900" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0006979 "response to oxidative stress"
evidence=RCA] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0052542 "defense
response by callose deposition" evidence=RCA] GO:GO:0005886
EMBL:CP002685 EMBL:AC005167 ProtClustDB:CLSN2685931
InterPro:IPR007942 Pfam:PF05278 IPI:IPI00517554 PIR:F84545
RefSeq:NP_565397.1 UniGene:At.12863 IntAct:Q9ZVX3 STRING:Q9ZVX3
PRIDE:Q9ZVX3 EnsemblPlants:AT2G16900.1 GeneID:816192
KEGG:ath:AT2G16900 TAIR:At2g16900 OMA:CKLESAS PhylomeDB:Q9ZVX3
ArrayExpress:Q9ZVX3 Genevestigator:Q9ZVX3 Uniprot:Q9ZVX3
Length = 382
Score = 184 (69.8 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 53/196 (27%), Positives = 93/196 (47%)
Query: 369 LDIN-DHDLYCHI-EKLMEKVKVSPAEVAGELMKAKGSKTSLEDFITYLXXXXXXXXXXX 426
+D+N +D + H EK V +SP +A + K + +
Sbjct: 112 IDLNGQNDSFNHKQEKPSRTVPLSPNSMA-DRGKPLSPRPQGHEHSGKNDTASEISLFNV 170
Query: 427 TAPPLASNVDGNRPEPQENGNNISKSGVQDQSSHTETEAADMGNVGGYSVKAEFANIIKA 486
+PP + D + + + NG + GV+ +++ +VG Y V + + I+++
Sbjct: 171 VSPPRSCANDDDDDDDENNGY---EEGVELDLISVMSDSCV--SVGKYRVNSSVSTILQS 225
Query: 487 IFSKHGDIAANSCLQSKQCRSSLLEIVCRIIXXXXXXXXXXXXETELKSMLSELQDLESM 546
I KHGDIAAN L+S RS LE +C ++ E ++K M++ L+DLES+
Sbjct: 226 IIDKHGDIAANCKLESASMRSRYLECLCSLMQELGSTPVGQLTELKVKEMVAVLKDLESV 285
Query: 547 RLEVGWLRKRLDEIVE 562
++VGW+R L+E +
Sbjct: 286 NIDVGWMRSVLEEFAQ 301
Score = 41 (19.5 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 115 DINSTSHFETRWYELKFHKMHTELVKK 141
D+N +H + R+ FH+ ++ ++K
Sbjct: 2 DVNRKAHPDCRYSSNPFHECASDCLEK 28
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 179 (68.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 73/225 (32%), Positives = 111/225 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
EYY ++G +G +LYGPPGTGK+ L A+AN + L VV S+ +YL
Sbjct: 207 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATF----LRVVGSELIQKYLGDGP 262
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L V SI+ +++ID +I + +S G E R Q T+ LLN +DG
Sbjct: 263 KLVRELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSGGE-----REIQRTMLELLNQLDG 316
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFK---QLAANYLDIND 373
GD K+ + TN + +DPAL+R GR+DR I T K Q+ + + + D
Sbjct: 317 F-DSRGDVKV-IMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLAD 374
Query: 374 HDLYCHIEKLMEKVKVSPAEV------AGEL-MKAKGSKTSLEDF 411
D+ E +M K +S A++ AG + ++ + K + EDF
Sbjct: 375 -DVTLD-ELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 417
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 179 (68.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 73/225 (32%), Positives = 111/225 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
EYY ++G +G +LYGPPGTGK+ L A+AN + L VV S+ +YL
Sbjct: 208 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATF----LRVVGSELIQKYLGDGP 263
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L V SI+ +++ID +I + +S G E R Q T+ LLN +DG
Sbjct: 264 KLVRELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSGGE-----REIQRTMLELLNQLDG 317
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFK---QLAANYLDIND 373
GD K+ + TN + +DPAL+R GR+DR I T K Q+ + + + D
Sbjct: 318 F-DSRGDVKV-IMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLAD 375
Query: 374 HDLYCHIEKLMEKVKVSPAEV------AGEL-MKAKGSKTSLEDF 411
D+ E +M K +S A++ AG + ++ + K + EDF
Sbjct: 376 -DVTLD-ELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 418
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 179 (68.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 73/225 (32%), Positives = 111/225 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
EYY ++G +G +LYGPPGTGK+ L A+AN + L VV S+ +YL
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATF----LRVVGSELIQKYLGDGP 264
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L V SI+ +++ID +I + +S G E R Q T+ LLN +DG
Sbjct: 265 KLVRELFRVAEEHGPSIVFIDEID-AIGTKRYDSNSGGE-----REIQRTMLELLNQLDG 318
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFK---QLAANYLDIND 373
GD K+ + TN + +DPAL+R GR+DR I T K Q+ + + + D
Sbjct: 319 F-DSRGDVKV-IMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLAD 376
Query: 374 HDLYCHIEKLMEKVKVSPAEV------AGEL-MKAKGSKTSLEDF 411
D+ E +M K +S A++ AG + ++ + K + EDF
Sbjct: 377 -DVTLD-ELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
>TAIR|locus:2131611 [details] [associations]
symbol:AT4G35110 "AT4G35110" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0080167 "response to karrikin"
evidence=IEP] [GO:0043090 "amino acid import" evidence=RCA]
EMBL:CP002687 GO:GO:0080167 EMBL:AL161586 IPI:IPI00846856
RefSeq:NP_001078494.1 UniGene:At.2102 STRING:A8MQE1 PRIDE:A8MQE1
EnsemblPlants:AT4G35110.3 GeneID:829663 KEGG:ath:AT4G35110
TAIR:At4g35110 eggNOG:NOG328928 HOGENOM:HOG000015108 OMA:FHECASA
PhylomeDB:A8MQE1 ProtClustDB:CLSN2685931 Genevestigator:A8MQE1
InterPro:IPR007942 Pfam:PF05278 Uniprot:A8MQE1
Length = 401
Score = 180 (68.4 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 47/137 (34%), Positives = 73/137 (53%)
Query: 428 APPLASNVDGNRPEPQENGNNISKSGVQDQSSHTETEAAD-MGNVGGYSVKAEFANIIKA 486
+P SN D + + EN N I GV+ E+ +D +VG Y V++ + I+ A
Sbjct: 192 SPGKESNDDFS-DDDDENNNEI---GVE---LDLESVMSDTFVSVGKYRVRSGSSTILSA 244
Query: 487 IFSKHGDIAANSCLQSKQCRSSLLEIVCRIIXXXXXXXXXXXXETELKSMLSELQDLESM 546
+ KHGDIA N L+S RS LE +C ++ + ++K ML+ L+DLES+
Sbjct: 245 VIEKHGDIAQNCKLESDSMRSRYLECLCSLMQELRSTPVGQLSKVKVKEMLAVLKDLESV 304
Query: 547 RLEVGWLRKRLDEIVEA 563
+EV WLR L+E ++
Sbjct: 305 NIEVAWLRSVLEEFAQS 321
Score = 40 (19.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 115 DINSTSHFETRWYELKFHKMHTELVKKKYLVHVLEMAKMFKDRNRIVRF 163
D N +H + + + FH+ + ++K HV + K K +R++ F
Sbjct: 17 DFNRKAHPDCVYADNPFHECASACLEKIAQGHVKKNTK--KQSSRLLSF 63
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 176 (67.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 72/225 (32%), Positives = 111/225 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
EYY ++G +G +LYGPPGTGK+ L A+AN + L VV S+ +YL
Sbjct: 136 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATF----LRVVGSELIQKYLGDGP 191
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L V SI+ +++ID +I + +S G E R Q T+ LLN +DG
Sbjct: 192 KLVRELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSGGE-----REIQRTMLELLNQLDG 245
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFK---QLAANYLDIND 373
GD K+ + TN + +DPAL+R GR+DR I T K Q+ + + + D
Sbjct: 246 F-DSRGDVKV-IMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLAD 303
Query: 374 HDLYCHIEKLMEKVKVSPAEV------AGEL-MKAKGSKTSLEDF 411
D+ + +M K +S A++ AG + ++ + K + EDF
Sbjct: 304 -DVTLD-DLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 346
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 176 (67.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 61/198 (30%), Positives = 91/198 (45%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLH 267
KE + K+G +G LLYGPPGTGK+ + A A N L + + L
Sbjct: 194 KERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKL- 252
Query: 268 VPNRSILVVEDIDCSIKLQNRES---QKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDE 324
V + L E C I + ++ ++ D R Q T+ LLN +DG DE
Sbjct: 253 VRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGF---SSDE 309
Query: 325 KITVFT-TNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCHIEKL 383
+I V TN D +DPAL+R+GR+DR I + T ++ A L I+ + H +
Sbjct: 310 RIKVIAATNRADILDPALMRSGRLDRKIEFPHPT----EEARARILQIHSRKMNVHPDVN 365
Query: 384 MEKVKVSPAEVAGELMKA 401
E++ S + G +KA
Sbjct: 366 FEELARSTDDFNGAQLKA 383
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 175 (66.7 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 55/153 (35%), Positives = 81/153 (52%)
Query: 211 YRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTS----DSS------ 260
Y+++G +G LLYGPPGTGK+ L AMA+ +N + + +S + +S+
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREM 222
Query: 261 LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCC 320
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 223 FNYAKEHQP--CIIFMDEIDA---IGGRRFSQGTS-AD--REIQRTLMELLNHLDGFEEL 274
Query: 321 CGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
G+ KI + TN D +DPAL+R GR+DR I +
Sbjct: 275 -GNVKI-IMATNRPDVLDPALVRPGRLDRKIEI 305
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 175 (66.7 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 55/153 (35%), Positives = 81/153 (52%)
Query: 211 YRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTS----DSS------ 260
Y+++G +G LLYGPPGTGK+ L AMA+ +N + + +S + +S+
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREM 222
Query: 261 LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCC 320
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 223 FNYAKEHQP--CIIFMDEIDA---IGGRRFSQGTS-AD--REIQRTLMELLNHLDGFEEL 274
Query: 321 CGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
G+ KI + TN D +DPAL+R GR+DR I +
Sbjct: 275 -GNVKI-IMATNRPDVLDPALVRPGRLDRKIEI 305
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 176 (67.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 72/225 (32%), Positives = 111/225 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
EYY ++G +G +LYGPPGTGK+ L A+AN + L VV S+ +YL
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATF----LRVVGSELIQKYLGDGP 264
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L V SI+ +++ID +I + +S G E R Q T+ LLN +DG
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSGGE-----REIQRTMLELLNQLDG 318
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFK---QLAANYLDIND 373
GD K+ + TN + +DPAL+R GR+DR I T K Q+ + + + D
Sbjct: 319 F-DSRGDVKV-IMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLAD 376
Query: 374 HDLYCHIEKLMEKVKVSPAEV------AGEL-MKAKGSKTSLEDF 411
D+ + +M K +S A++ AG + ++ + K + EDF
Sbjct: 377 -DVTLD-DLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 176 (67.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 72/225 (32%), Positives = 111/225 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
EYY ++G +G +LYGPPGTGK+ L A+AN + L VV S+ +YL
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATF----LRVVGSELIQKYLGDGP 264
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L V SI+ +++ID +I + +S G E R Q T+ LLN +DG
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSGGE-----REIQRTMLELLNQLDG 318
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFK---QLAANYLDIND 373
GD K+ + TN + +DPAL+R GR+DR I T K Q+ + + + D
Sbjct: 319 F-DSRGDVKV-IMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLAD 376
Query: 374 HDLYCHIEKLMEKVKVSPAEV------AGEL-MKAKGSKTSLEDF 411
D+ + +M K +S A++ AG + ++ + K + EDF
Sbjct: 377 -DVTLD-DLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 176 (67.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 72/225 (32%), Positives = 111/225 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
EYY ++G +G +LYGPPGTGK+ L A+AN + L VV S+ +YL
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATF----LRVVGSELIQKYLGDGP 264
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L V SI+ +++ID +I + +S G E R Q T+ LLN +DG
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSGGE-----REIQRTMLELLNQLDG 318
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFK---QLAANYLDIND 373
GD K+ + TN + +DPAL+R GR+DR I T K Q+ + + + D
Sbjct: 319 F-DSRGDVKV-IMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLAD 376
Query: 374 HDLYCHIEKLMEKVKVSPAEV------AGEL-MKAKGSKTSLEDF 411
D+ + +M K +S A++ AG + ++ + K + EDF
Sbjct: 377 -DVTLD-DLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 176 (67.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 72/225 (32%), Positives = 111/225 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
EYY ++G +G +LYGPPGTGK+ L A+AN + L VV S+ +YL
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATF----LRVVGSELIQKYLGDGP 264
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L V SI+ +++ID +I + +S G E R Q T+ LLN +DG
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSGGE-----REIQRTMLELLNQLDG 318
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFK---QLAANYLDIND 373
GD K+ + TN + +DPAL+R GR+DR I T K Q+ + + + D
Sbjct: 319 F-DSRGDVKV-IMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLAD 376
Query: 374 HDLYCHIEKLMEKVKVSPAEV------AGEL-MKAKGSKTSLEDF 411
D+ + +M K +S A++ AG + ++ + K + EDF
Sbjct: 377 -DVTLD-DLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 176 (67.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 72/225 (32%), Positives = 111/225 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
EYY ++G +G +LYGPPGTGK+ L A+AN + L VV S+ +YL
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATF----LRVVGSELIQKYLGDGP 264
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L V SI+ +++ID +I + +S G E R Q T+ LLN +DG
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSGGE-----REIQRTMLELLNQLDG 318
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFK---QLAANYLDIND 373
GD K+ + TN + +DPAL+R GR+DR I T K Q+ + + + D
Sbjct: 319 F-DSRGDVKV-IMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLAD 376
Query: 374 HDLYCHIEKLMEKVKVSPAEV------AGEL-MKAKGSKTSLEDF 411
D+ + +M K +S A++ AG + ++ + K + EDF
Sbjct: 377 -DVTLD-DLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 176 (67.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 72/225 (32%), Positives = 111/225 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
EYY ++G +G +LYGPPGTGK+ L A+AN + L VV S+ +YL
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATF----LRVVGSELIQKYLGDGP 264
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L V SI+ +++ID +I + +S G E R Q T+ LLN +DG
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSGGE-----REIQRTMLELLNQLDG 318
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFK---QLAANYLDIND 373
GD K+ + TN + +DPAL+R GR+DR I T K Q+ + + + D
Sbjct: 319 F-DSRGDVKV-IMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLAD 376
Query: 374 HDLYCHIEKLMEKVKVSPAEV------AGEL-MKAKGSKTSLEDF 411
D+ + +M K +S A++ AG + ++ + K + EDF
Sbjct: 377 -DVTLD-DLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 419
>TAIR|locus:2095467 [details] [associations]
symbol:AT3G28560 "AT3G28560" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] EMBL:CP002686
GenomeReviews:BA000014_GR eggNOG:COG0465 EMBL:AP000420
InterPro:IPR025753 Pfam:PF14363 EMBL:AY924779 EMBL:DQ132691
IPI:IPI00534445 RefSeq:NP_189497.1 UniGene:At.53542
UniGene:At.73270 EnsemblPlants:AT3G28560.1 GeneID:822486
KEGG:ath:AT3G28560 TAIR:At3g28560 PhylomeDB:Q9LJJ9
Genevestigator:Q9LJJ9 Uniprot:Q9LJJ9
Length = 257
Score = 168 (64.2 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 57/208 (27%), Positives = 94/208 (45%)
Query: 2 GSAFSVVASVAILRSTFNEMIPDEVRGYIWSITRRFSTEITMIIKE-SHDG-STNRLFKA 59
G S + S+ + +N++ + YI+ + S + + E S +G + F
Sbjct: 9 GFTGSTMTSLMFFWAMYNQV---HIEKYIYKLMGWVSNSVHIKFNEYSGEGLEKSEAFDT 65
Query: 60 VVTYLDGHALSNSVLPKRLTVGKNENVRNFTYGLERNSEIVDVFQGVTMKW----KFNSD 115
+ YL + ++ L RL +++ ++ L+ + + DVFQGV +KW + N +
Sbjct: 66 IHNYL---STKSTALGNRLKANESKKSKSLVLSLDDHETVEDVFQGVKVKWSSSVRENQN 122
Query: 116 INSTSH---F-ETRWYELKFHKMHTELVKKKYLVHVLEMAKMF--KDRNRIVRFHTIRHD 169
+ST+ F E R+ L FH H E++ YL HVL K K R R + + H+
Sbjct: 123 QSSTNRDKGFAERRYLTLSFHSRHREMITTTYLDHVLREGKEIGLKKRERKLYTNNSSHE 182
Query: 170 RWSS-------SGVNLDHPMTFGTLVMD 190
W S S V+ DHP T T MD
Sbjct: 183 -WISWRLGTNWSNVSFDHPATLETFAMD 209
>UNIPROTKB|C9J1S9 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 GO:GO:0005739
GO:GO:0005524 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
IPI:IPI00927724 ProteinModelPortal:C9J1S9 SMR:C9J1S9 STRING:C9J1S9
Ensembl:ENST00000443791 ArrayExpress:C9J1S9 Bgee:C9J1S9
Uniprot:C9J1S9
Length = 150
Score = 153 (58.9 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 43/147 (29%), Positives = 76/147 (51%)
Query: 124 TRWYELKFHKMHTELVKKKYLVHVLEMAK---MFKDRNRIVRFHTIRHDRWSSSGV-NLD 179
T W + F + T+ +K ++LE A+ + ++ + V + + + W G
Sbjct: 10 TPWESVTFTALGTD---RKVFFNILEEARELALQQEEGKTVMYTAVGSE-WRPFGYPRRR 65
Query: 180 HPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAM 239
P+ ++V+ L + ++ D+ F ++Y G ++RGYLLYGPPG GKSS I A+
Sbjct: 66 RPLN--SVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITAL 123
Query: 240 ANYMNYDIYNLNLSVVT-SDSSLEYLL 265
A + + I L+L+ + SD L +LL
Sbjct: 124 AGELEHSICLLSLTDSSLSDDRLNHLL 150
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 173 (66.0 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 56/158 (35%), Positives = 81/158 (51%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTS----DSS- 260
+ E ++++G +G LLYGPPGTGK+ L A+A+ M + + S + +S+
Sbjct: 158 KNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVSSAIVDKYIGESAR 217
Query: 261 -----LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAID 315
Y H P I+ +++ID + R +G AD R Q TL LLN +D
Sbjct: 218 LIREMFGYAKEHEP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQLD 269
Query: 316 GLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
G G KI + TN D +DPALLRAGR+DR I +
Sbjct: 270 GF-DYLGKTKI-IMATNRPDTLDPALLRAGRLDRKIEI 305
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 173 (66.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 61/204 (29%), Positives = 98/204 (48%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + K+G +G LLYGPPGTGK+ + A A N L + + D +
Sbjct: 193 KEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 252
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQ-KGDEPADSYRGPQVTLAGLLNAIDGLL 318
+LL + I+ +++ID +I + +S+ GD R Q T+ LLN +DG
Sbjct: 253 RDAFLLAKEKSPCIIFIDEID-AIGTKRFDSEVSGD------REVQRTMLELLNQLDGF- 304
Query: 319 CCCGDEKITVFT-TNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLY 377
D++I V TN D +DPAL+R+GR+DR I + T ++ L I+ +
Sbjct: 305 --SSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPT----EEARGRILQIHSRKMN 358
Query: 378 CHIEKLMEKVKVSPAEVAGELMKA 401
+ + E++ S + G +KA
Sbjct: 359 VNADVNFEELARSTDDFNGAQLKA 382
>ASPGD|ASPL0000007908 [details] [associations]
symbol:AN6397 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001301 eggNOG:COG0465 GO:GO:0017111
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
EMBL:AACD01000108 OrthoDB:EOG4BK8C9 RefSeq:XP_664001.1
ProteinModelPortal:Q5AZ83 EnsemblFungi:CADANIAT00006582
GeneID:2871293 KEGG:ani:AN6397.2 HOGENOM:HOG000201600 OMA:EEANAYS
Uniprot:Q5AZ83
Length = 518
Score = 174 (66.3 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 45/134 (33%), Positives = 71/134 (52%)
Query: 170 RWSSSGVNLDHPMTFGTLVMDGDLKETVLNDLDCFRRG--KEYYRKIGKVWKRGYLLYGP 227
RW+ + T+++D K+ VL+D+ + R +++Y G ++RGYL GP
Sbjct: 203 RWNR--ITTRPSRAISTVILDSCKKKAVLDDMREYLREDTRQWYANHGIPYRRGYLFSGP 260
Query: 228 PGTGKSSLIAAMANYMNYDIYNLNL-SVVTSDSSLEYLLLHVPNRSILVVEDIDCS---I 283
PGTGK+SL +A+A DIY L+L S+S L VP + ++++EDID + +
Sbjct: 261 PGTGKTSLSSALAGVFGLDIYVLSLLDPNISESHFLRLFSEVPTQCVVLLEDIDAAGMTL 320
Query: 284 KLQNRESQKGDEPA 297
K N E D A
Sbjct: 321 KRANEEPVTADTTA 334
Score = 127 (49.8 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 48/157 (30%), Positives = 75/157 (47%)
Query: 226 GPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCS--- 282
G T SS +A + Y + L+ ++ S+S L VP + ++++EDID +
Sbjct: 262 GTGKTSLSSALAGVFGLDIYVLSLLDPNI--SESHFLRLFSEVPTQCVVLLEDIDAAGMT 319
Query: 283 IKLQNRESQKGDEPA--DSYR------GP-------QVTLAGLLNAIDGLLCCCGDEKIT 327
+K N E D A D + P ++L+ LLNAIDG+ G +I
Sbjct: 320 LKRANEEPVTADTTASFDVMKKRARPGAPVPTSPPTPISLSALLNAIDGVSSQEG--RIL 377
Query: 328 VFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQL 364
+ TTN +DPAL+R GR+D HI + F++L
Sbjct: 378 IMTTNAPQDLDPALIRPGRVDMHIRFELPSRVEFREL 414
Score = 37 (18.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 10 SVAILRSTFNEMIPDEVRGYIWSITRRF 37
S IL S + + D++R Y+ TR++
Sbjct: 216 STVILDSCKKKAVLDDMREYLREDTRQW 243
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 172 (65.6 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 56/155 (36%), Positives = 81/155 (52%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
EYY ++G +G +LYGPPGTGK+ L A+AN + L VV S+ +YL
Sbjct: 208 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATF----LRVVGSELIQKYLGDGP 263
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L V SI+ +++ID ++ + +S G E R Q T+ LLN +DG
Sbjct: 264 KLVRELFRVAEEHAPSIVFIDEID-AVGTKRYDSNSGGE-----REIQRTMLELLNQLDG 317
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
GD K+ + TN + +DPAL+R GR+DR I
Sbjct: 318 F-DSRGDVKV-IMATNRIETLDPALIRPGRIDRKI 350
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 68/223 (30%), Positives = 104/223 (46%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN 251
++KE V L C E Y KIG G L+YGPPGTGK+ L+ A+AN
Sbjct: 149 EMKEAVELPLTC----PELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTF---- 200
Query: 252 LSVVTSDSSLEYL------------LLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADS 299
+ VV S+ +YL L + SI+ ++++D +I + ++Q G AD
Sbjct: 201 IGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVD-AIATKRFDAQTG---AD- 255
Query: 300 YRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFS 359
R Q L LLN +DG + K+ + TN D +DPALLR GR+DR I
Sbjct: 256 -REVQRILLELLNQMDGFDKST-NVKV-IMATNRADTLDPALLRPGRLDRKIEFPLPDRK 312
Query: 360 TFKQLAANYLDINDHDLYCHIEKLMEKV-KVSPAEVAGELMKA 401
+ + + + +IE + + K+S A++A +A
Sbjct: 313 QKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEA 355
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 68/223 (30%), Positives = 104/223 (46%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN 251
++KE V L C E Y KIG G L+YGPPGTGK+ L+ A+AN
Sbjct: 149 EMKEAVELPLTC----PELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTF---- 200
Query: 252 LSVVTSDSSLEYL------------LLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADS 299
+ VV S+ +YL L + SI+ ++++D +I + ++Q G AD
Sbjct: 201 IGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVD-AIATKRFDAQTG---AD- 255
Query: 300 YRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFS 359
R Q L LLN +DG + K+ + TN D +DPALLR GR+DR I
Sbjct: 256 -REVQRILLELLNQMDGFDKST-NVKV-IMATNRADTLDPALLRPGRLDRKIEFPLPDRK 312
Query: 360 TFKQLAANYLDINDHDLYCHIEKLMEKV-KVSPAEVAGELMKA 401
+ + + + +IE + + K+S A++A +A
Sbjct: 313 QKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEA 355
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 170 (64.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 69/204 (33%), Positives = 103/204 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y IG +G +LYGPPGTGK+ L A+AN + L VV S+ +YL
Sbjct: 217 ELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATF----LRVVGSELIQKYLGDGP 272
Query: 265 -LL---------HVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAI 314
L+ H P SI+ +++ID ++ + E+ G E R Q T+ LLN +
Sbjct: 273 KLVREMFKVAEEHAP--SIVFIDEID-AVGTKRYEATSGGE-----REIQRTMLELLNQL 324
Query: 315 DGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFK---QLAANYLDI 371
DG GD K+ + TN D +DPAL+R GR+DR I L T + Q+ + + +
Sbjct: 325 DGF-DSRGDVKV-IMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTM 382
Query: 372 N-DHDLYCHIEKLMEKVKVSPAEV 394
+ D DL E +M K ++S A++
Sbjct: 383 SPDVDLE---EFVMSKDELSGADI 403
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 170 (64.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 69/204 (33%), Positives = 103/204 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y IG +G +LYGPPGTGK+ L A+AN + L VV S+ +YL
Sbjct: 217 ELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATF----LRVVGSELIQKYLGDGP 272
Query: 265 -LL---------HVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAI 314
L+ H P SI+ +++ID ++ + E+ G E R Q T+ LLN +
Sbjct: 273 KLVREMFKVAEEHAP--SIVFIDEID-AVGTKRYEATSGGE-----REIQRTMLELLNQL 324
Query: 315 DGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFK---QLAANYLDI 371
DG GD K+ + TN D +DPAL+R GR+DR I L T + Q+ + + +
Sbjct: 325 DGF-DSRGDVKV-IMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTM 382
Query: 372 N-DHDLYCHIEKLMEKVKVSPAEV 394
+ D DL E +M K ++S A++
Sbjct: 383 SPDVDLE---EFVMSKDELSGADI 403
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 168 (64.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 61/204 (29%), Positives = 98/204 (48%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + KIG +G L++GPPGTGK+ L A A+ N L + + D +
Sbjct: 209 KEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMV 268
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQ-KGDEPADSYRGPQVTLAGLLNAIDGLL 318
+ L +I+ ++++D +I + +S+ GD R Q T+ LLN +DG
Sbjct: 269 RDAFNLAKEKAPAIIFIDELD-AIGTKRFDSELSGD------REVQRTMLELLNQLDGFS 321
Query: 319 CCCGDEKITVFT-TNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLY 377
D+ + V TN D +DPALLR+GR+DR I L + ++ A L I+ +
Sbjct: 322 T---DDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPN----EESRARILQIHSRKMN 374
Query: 378 CHIEKLMEKVKVSPAEVAGELMKA 401
H + E++ S + G +KA
Sbjct: 375 VHKDVNFEELARSTDDFNGAQLKA 398
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 168 (64.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 61/204 (29%), Positives = 98/204 (48%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + KIG +G L++GPPGTGK+ L A A+ N L + + D +
Sbjct: 209 KEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMV 268
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQ-KGDEPADSYRGPQVTLAGLLNAIDGLL 318
+ L +I+ ++++D +I + +S+ GD R Q T+ LLN +DG
Sbjct: 269 RDAFNLAKEKAPAIIFIDELD-AIGTKRFDSELSGD------REVQRTMLELLNQLDGFS 321
Query: 319 CCCGDEKITVFT-TNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLY 377
D+ + V TN D +DPALLR+GR+DR I L + ++ A L I+ +
Sbjct: 322 T---DDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPN----EESRARILQIHSRKMN 374
Query: 378 CHIEKLMEKVKVSPAEVAGELMKA 401
H + E++ S + G +KA
Sbjct: 375 VHKDVNFEELARSTDDFNGAQLKA 398
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 165 (63.1 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 63/201 (31%), Positives = 97/201 (48%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTS----DSS---- 260
E ++++G +G LL+GPPGTGK+ L A+A+ ++ + + S + +S+
Sbjct: 174 ELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIR 233
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 234 EMFNYARDHQP--CIVFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQLDGF- 284
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYC 378
G K+ + TN D +DPALLR GR+DR I + +Q L I+ + +
Sbjct: 285 DSLGKVKV-IMATNRPDTLDPALLRPGRLDRKIEIGLPN----EQSRLEILKIHSNKITK 339
Query: 379 HIEKLMEKV-KVSPAEVAGEL 398
H E E V K+S A +L
Sbjct: 340 HGEIDFEAVVKLSDGFSAADL 360
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 165 (63.1 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 63/201 (31%), Positives = 97/201 (48%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTS----DSS---- 260
E ++++G +G LL+GPPGTGK+ L A+A+ ++ + + S + +S+
Sbjct: 174 ELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIR 233
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 234 EMFNYARDHQP--CIVFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQLDGF- 284
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYC 378
G K+ + TN D +DPALLR GR+DR I + +Q L I+ + +
Sbjct: 285 DSLGKVKV-IMATNRPDTLDPALLRPGRLDRKIEIGLPN----EQSRLEILKIHSNKITK 339
Query: 379 HIEKLMEKV-KVSPAEVAGEL 398
H E E V K+S A +L
Sbjct: 340 HGEIDFEAVVKLSDGFSAADL 360
>TAIR|locus:2047122 [details] [associations]
symbol:pEARLI4 "AT2G20960" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006569 "tryptophan catabolic process"
evidence=RCA] [GO:0009684 "indoleacetic acid biosynthetic process"
evidence=RCA] EMBL:CP002685 EMBL:AC006234 EMBL:AC006264
InterPro:IPR007942 Pfam:PF05278 EMBL:AY059813 EMBL:BT000010
IPI:IPI00543282 PIR:D84595 RefSeq:NP_179692.1 UniGene:At.25090
STRING:Q9SKR5 PRIDE:Q9SKR5 EnsemblPlants:AT2G20960.1 GeneID:816630
KEGG:ath:AT2G20960 TAIR:At2g20960 InParanoid:Q9SKR5 OMA:PRTPIHE
PhylomeDB:Q9SKR5 ProtClustDB:CLSN2913136 Genevestigator:Q9SKR5
Uniprot:Q9SKR5
Length = 748
Score = 169 (64.5 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 36/108 (33%), Positives = 66/108 (61%)
Query: 470 NVGGYSVKAEFANIIKAIFSKHGDIAANSCLQSKQCRSSLLEIVCRIIXXXXXXXXXXXX 529
+VG Y V+A + ++ I KHGDIA+ S LQS RS L+++ ++
Sbjct: 565 SVGQYKVRASVSTTLQHILQKHGDIASGSKLQSLATRSYYLDMLASVVFELQTTPLKYLK 624
Query: 530 ETELKSMLSELQDLESMRLEVGWLRKRLDEIVEAMRLFE--LIAVSEK 575
E+ + M++ ++D+ES++++ GWL+ L+EIVEA++ ++ ++V EK
Sbjct: 625 ESRVVEMVAIVKDIESVKIKAGWLKPVLEEIVEAVKHYDEHKMSVVEK 672
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 165 (63.1 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 53/151 (35%), Positives = 78/151 (51%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLE------ 262
+ Y++IG RG LLYGPPGTGK+ L+ A+AN +N S E
Sbjct: 190 DLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVR 249
Query: 263 --YLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCC 320
+ + + +I+ +++ID +I + ++Q G AD R Q L LLN +DG
Sbjct: 250 DVFRMARENSPAIIFIDEID-AIATKRFDAQTG---AD--REVQRILLELLNQMDGFEQT 303
Query: 321 CGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ K+ + TN D +DPALLR GR+DR I
Sbjct: 304 -SNVKV-IMATNRADTLDPALLRPGRLDRKI 332
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 165 (63.1 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 52/153 (33%), Positives = 75/153 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLE------ 262
EYY ++G +G +LYG PGTGK+ L A+AN + S + S E
Sbjct: 207 EYYEEMGITAPKGVILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVR 266
Query: 263 --YLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCC 320
+ + SI+ +++ID + S +G++ Q TL LLN +DG
Sbjct: 267 QIFQMAKEQAPSIVFIDEIDAVGTKRFDTSSRGEQEV------QRTLLELLNQLDGFESR 320
Query: 321 CGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
GD KI + TN D +DPAL+R GR+DR I L
Sbjct: 321 -GDVKI-IMATNRIDSLDPALIRPGRIDRKIEL 351
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 165 (63.1 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 56/155 (36%), Positives = 80/155 (51%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
EYY ++G +G +LYG PGTGK+ L A+AN + L VV S+ +YL
Sbjct: 209 EYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATF----LRVVGSELIQKYLGDGP 264
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L V SI+ +++ID +I + +S G E R Q T+ LLN +DG
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSGGE-----REIQRTMLELLNQLDG 318
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
GD K+ + TN + +DPAL+R GR+DR I
Sbjct: 319 F-DSRGDVKV-IMATNRIETLDPALIRPGRIDRKI 351
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 165 (63.1 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 56/155 (36%), Positives = 80/155 (51%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
EYY ++G +G +LYG PGTGK+ L A+AN + L VV S+ +YL
Sbjct: 209 EYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATF----LRVVGSELIQKYLGDGP 264
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L V SI+ +++ID +I + +S G E R Q T+ LLN +DG
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSGGE-----REIQRTMLELLNQLDG 318
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
GD K+ + TN + +DPAL+R GR+DR I
Sbjct: 319 F-DSRGDVKV-IMATNRIETLDPALIRPGRIDRKI 351
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 164 (62.8 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 56/154 (36%), Positives = 77/154 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLE------ 262
+ Y +IG RG LLYGPPGTGK+ L+ A+AN +N S E
Sbjct: 179 DLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGSEFVQKYLGEGPRMVR 238
Query: 263 --YLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCC 320
+ L + +I+ +++ID +I + ++Q G AD R Q L LLN +DG
Sbjct: 239 DVFRLARENSPAIIFIDEID-AIATKRFDAQTG---AD--REVQRILLELLNQMDGF--- 289
Query: 321 CGDEKITV---FTTNYKDRIDPALLRAGRMDRHI 351
D+ TV TN D +DPALLR GR+DR I
Sbjct: 290 --DQTSTVKVIMATNRADTLDPALLRPGRLDRKI 321
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 164 (62.8 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 56/154 (36%), Positives = 77/154 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLE------ 262
+ Y +IG RG LLYGPPGTGK+ L+ A+AN +N S E
Sbjct: 179 DLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGSEFVQKYLGEGPRMVR 238
Query: 263 --YLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCC 320
+ L + +I+ +++ID +I + ++Q G AD R Q L LLN +DG
Sbjct: 239 DVFRLARENSPAIIFIDEID-AIATKRFDAQTG---AD--REVQRILLELLNQMDGF--- 289
Query: 321 CGDEKITV---FTTNYKDRIDPALLRAGRMDRHI 351
D+ TV TN D +DPALLR GR+DR I
Sbjct: 290 --DQTSTVKVIMATNRADTLDPALLRPGRLDRKI 321
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 164 (62.8 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 55/158 (34%), Positives = 82/158 (51%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYD-IYNLNLSVVTS---DSS- 260
+ E + ++G +G LLYGPPGTGK+ L A+A + + I++ ++V +S+
Sbjct: 193 KNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASAIVDKYIGESAR 252
Query: 261 -----LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAID 315
Y H P I+ ++++D + R +G AD R Q TL LLN +D
Sbjct: 253 LIREMFAYAKEHEP--CIIFMDEVDA---IGGRRFSEGTS-AD--REIQRTLMELLNQMD 304
Query: 316 GLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
G G KI + TN D +DPALLRAGR+DR I +
Sbjct: 305 GF-DTLGQTKI-IMATNRPDTLDPALLRAGRLDRKIEI 340
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 163 (62.4 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 68/212 (32%), Positives = 103/212 (48%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y++IG RG LLYGPPGTGK+ L A+AN+ + VV S+ +YL
Sbjct: 179 ELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAF----IRVVGSEFVQKYLGEGP 234
Query: 265 -------LLHVPNR-SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L N +I+ ++++D +I ++Q G AD R Q L LLN +DG
Sbjct: 235 RMVRDVFRLAKENAPAIIFIDEVD-AIATARFDAQTG---AD--REVQRILMELLNQMDG 288
Query: 317 LLCCCGDEKITV---FTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFK---QLAANYLD 370
D+ + V TN D +DPALLR GR+DR I + Q+ + ++
Sbjct: 289 F-----DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMN 343
Query: 371 INDH-DLYCHIEKLMEKVKVSPAEVAGELMKA 401
++D DL ++ + K+S AE+A +A
Sbjct: 344 LSDEVDLEDYVSR---PDKISAAEIAAICQEA 372
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 162 (62.1 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 53/155 (34%), Positives = 79/155 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTS----DSS---- 260
E + ++G +G LLYGPPGTGK+ L A+A+ ++ + + S + +S+
Sbjct: 165 ELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIR 224
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 225 EMFNYARDHQP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQMDGF- 275
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
G K+ + TN D +DPALLR GR+DR I +
Sbjct: 276 DSLGQVKM-IMATNRPDSLDPALLRPGRLDRKIEI 309
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 163 (62.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 59/202 (29%), Positives = 94/202 (46%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSLE-- 262
E ++K+G +G L+YGPPGTGK+ L A A N L + + D +
Sbjct: 235 ERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNATFLKLAGPQLVQMFIGDGAKLVR 294
Query: 263 --YLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCC 320
+ L SI+ ++++D ++ + +S+K + R Q T+ LLN +DG
Sbjct: 295 DCFALAKEKAPSIIFIDELD-AVGTKRFDSEKSGD-----REVQRTMLELLNQLDGF--- 345
Query: 321 CGDEKITVFT-TNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCH 379
D++I V TN D +DPALLR+GR+DR I ++ AN L I+ +
Sbjct: 346 ASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPN----EEARANILQIHSRKMTVE 401
Query: 380 IEKLMEKVKVSPAEVAGELMKA 401
++ S E G +KA
Sbjct: 402 DSVNWAELARSTDEFGGAQLKA 423
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 63/212 (29%), Positives = 105/212 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y +IG +G +LYG PGTGK+ L A+AN + L VV S+ +YL
Sbjct: 208 ELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATF----LRVVGSELIQKYLGDGP 263
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L V + SI+ +++ID ++ + +SQ G E R Q T+ LLN +DG
Sbjct: 264 KLVRELFRVADECAPSIVFIDEID-AVGTKRYDSQSGGE-----REIQRTMLELLNQLDG 317
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDL 376
D K+ + TN + +DPAL+R GR+DR I T +++ +I+ +
Sbjct: 318 FDART-DVKV-IMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKI----FEIHTAKM 371
Query: 377 YCHIEKLMEKVKVSPAEVAGELMKAKGSKTSL 408
+ +E+ +S +++G +KA +++ L
Sbjct: 372 NLSEDVNLEEFVMSKDDLSGADIKAICTESGL 403
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 161 (61.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 66/224 (29%), Positives = 105/224 (46%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G +LYGPPGTGK+ L A+A++
Sbjct: 149 LDKQIKE-IKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTECKFI 207
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + S + E ++ H P SI+ +++ID SI E G D
Sbjct: 208 RVSGSELVQKYIGEGSRMVRELFVMAREHAP--SIIFMDEID-SIGSSRVEGSSG---GD 261
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTF 358
S Q T+ LLN +DG D KI + TN D +DPALLR GR+DR I T
Sbjct: 262 SE--VQRTMLELLNQLDGFESS-KDIKI-IMATNRLDILDPALLRPGRIDRKIEFPAPTV 317
Query: 359 STFKQLAANYLDINDHDLYCHIEKLMEKVK-VSPAEVAGELMKA 401
+ + + + ++ K+ EK+ S A+V G +A
Sbjct: 318 AARTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEA 361
>TAIR|locus:2121169 [details] [associations]
symbol:AT4G38560 "AT4G38560" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR
UniGene:At.48962 UniGene:At.71025 InterPro:IPR007942 Pfam:PF05278
EMBL:AK226980 IPI:IPI00542074 RefSeq:NP_001078512.1
EnsemblPlants:AT4G38560.2 GeneID:830013 KEGG:ath:AT4G38560
TAIR:At4g38560 eggNOG:NOG328515 HOGENOM:HOG000120704 OMA:HETTVVE
PhylomeDB:Q0WV01 ProtClustDB:CLSN2685438 Genevestigator:Q0WV01
Uniprot:Q0WV01
Length = 523
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 34/99 (34%), Positives = 57/99 (57%)
Query: 470 NVGGYSVKAEFANIIKAIFSKHGDIAANSCLQSKQCRSSLLEIVCRIIXXXXXXXXXXXX 529
+VG Y V+A ++ ++ I KHGDIA+ S LQS + +S LE + ++
Sbjct: 340 SVGSYKVRASVSSTLQKILDKHGDIASGSKLQSLRTKSYSLETLAAVVLELQSTPLKKLK 399
Query: 530 ETELKSMLSELQDLESMRLEVGWLRKRLDEIVEAMRLFE 568
+ + MLS + D ES+++ GWLR+ L+EI+EA ++
Sbjct: 400 QARVLEMLSVVIDAESVKIRAGWLREILNEILEAAHHYD 438
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 159 (61.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 53/155 (34%), Positives = 83/155 (53%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNL-NLSVVTS---DSS---- 260
E ++++G + +G LLYGPPGTGK+ L A+A+ ++ + + + S+V +S+
Sbjct: 149 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 208
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 209 EMFNYARDHQP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQMDGF- 259
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
K+ + TN D +DPALLR GR+DR I++
Sbjct: 260 DTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHI 293
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 159 (61.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 53/158 (33%), Positives = 78/158 (49%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTS----DSS- 260
+ E + ++G +G LLYGPPGTGK+ L A+A + + + S + +S+
Sbjct: 153 KNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESAR 212
Query: 261 -----LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAID 315
Y H P ++ +++ID + R +G AD R Q TL LLN +D
Sbjct: 213 IIREMFGYAKEHEP--CVIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQMD 264
Query: 316 GLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
G G KI + TN D +DPALLR GR+DR I +
Sbjct: 265 GF-DYLGQTKI-IMATNRPDTLDPALLRPGRLDRKIEI 300
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 53/155 (34%), Positives = 83/155 (53%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNL-NLSVVTS---DSS---- 260
E ++++G + +G LLYGPPGTGK+ L A+A+ ++ + + + S+V +S+
Sbjct: 157 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 217 EMFNYARDHQP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQMDGF- 267
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
K+ + TN D +DPALLR GR+DR I++
Sbjct: 268 DTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHI 301
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 53/155 (34%), Positives = 83/155 (53%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNL-NLSVVTS---DSS---- 260
E ++++G + +G LLYGPPGTGK+ L A+A+ ++ + + + S+V +S+
Sbjct: 157 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 217 EMFNYARDHQP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQMDGF- 267
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
K+ + TN D +DPALLR GR+DR I++
Sbjct: 268 DTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHI 301
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 53/155 (34%), Positives = 83/155 (53%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNL-NLSVVTS---DSS---- 260
E ++++G + +G LLYGPPGTGK+ L A+A+ ++ + + + S+V +S+
Sbjct: 157 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 217 EMFNYARDHQP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQMDGF- 267
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
K+ + TN D +DPALLR GR+DR I++
Sbjct: 268 DTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHI 301
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 53/155 (34%), Positives = 83/155 (53%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNL-NLSVVTS---DSS---- 260
E ++++G + +G LLYGPPGTGK+ L A+A+ ++ + + + S+V +S+
Sbjct: 157 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 217 EMFNYARDHQP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQMDGF- 267
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
K+ + TN D +DPALLR GR+DR I++
Sbjct: 268 DTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHI 301
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 53/155 (34%), Positives = 83/155 (53%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNL-NLSVVTS---DSS---- 260
E ++++G + +G LLYGPPGTGK+ L A+A+ ++ + + + S+V +S+
Sbjct: 157 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 217 EMFNYARDHQP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQMDGF- 267
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
K+ + TN D +DPALLR GR+DR I++
Sbjct: 268 DTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHI 301
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 53/155 (34%), Positives = 83/155 (53%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNL-NLSVVTS---DSS---- 260
E ++++G + +G LLYGPPGTGK+ L A+A+ ++ + + + S+V +S+
Sbjct: 157 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 217 EMFNYARDHQP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQMDGF- 267
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
K+ + TN D +DPALLR GR+DR I++
Sbjct: 268 DTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHI 301
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 53/155 (34%), Positives = 83/155 (53%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNL-NLSVVTS---DSS---- 260
E ++++G + +G LLYGPPGTGK+ L A+A+ ++ + + + S+V +S+
Sbjct: 157 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 217 EMFNYARDHQP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQMDGF- 267
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
K+ + TN D +DPALLR GR+DR I++
Sbjct: 268 DTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHI 301
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 160 (61.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 56/163 (34%), Positives = 80/163 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHV 268
E Y IG +G +LYG PGTGK+ L A+AN + L VV S+ +YL
Sbjct: 212 ELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATF----LRVVGSELIQKYLG-DG 266
Query: 269 PN--RSIL-VVEDIDCSIKLQNRESQKGDEPADSYRGP----QVTLAGLLNAIDGLLCCC 321
P R + V +D+ SI + G + D++ G Q T+ LLN +DG
Sbjct: 267 PKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGF-DSR 325
Query: 322 GDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQL 364
GD K+ + TN + +DPALLR GR+DR I T +++
Sbjct: 326 GDVKV-ILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRI 367
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 53/155 (34%), Positives = 83/155 (53%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNL-NLSVVTS---DSS---- 260
E ++++G + +G LLYGPPGTGK+ L A+A+ ++ + + + S+V +S+
Sbjct: 163 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 222
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 223 EMFNYARDHQP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQMDGF- 273
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
K+ + TN D +DPALLR GR+DR I++
Sbjct: 274 DTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHI 307
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 159 (61.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 53/155 (34%), Positives = 83/155 (53%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNL-NLSVVTS---DSS---- 260
E ++++G + +G LLYGPPGTGK+ L A+A+ ++ + + + S+V +S+
Sbjct: 171 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 230
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 231 EMFNYARDHQP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQMDGF- 281
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
K+ + TN D +DPALLR GR+DR I++
Sbjct: 282 DTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHI 315
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 159 (61.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 53/155 (34%), Positives = 83/155 (53%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNL-NLSVVTS---DSS---- 260
E ++++G + +G LLYGPPGTGK+ L A+A+ ++ + + + S+V +S+
Sbjct: 171 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 230
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 231 EMFNYARDHQP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQMDGF- 281
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
K+ + TN D +DPALLR GR+DR I++
Sbjct: 282 DTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHI 315
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 159 (61.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 53/155 (34%), Positives = 83/155 (53%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNL-NLSVVTS---DSS---- 260
E ++++G + +G LLYGPPGTGK+ L A+A+ ++ + + + S+V +S+
Sbjct: 171 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 230
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 231 EMFNYARDHQP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQMDGF- 281
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
K+ + TN D +DPALLR GR+DR I++
Sbjct: 282 DTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHI 315
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 158 (60.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 52/155 (33%), Positives = 79/155 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTS----DSS---- 260
+ + ++G +G LLYGPPGTGK+ L A+A+ M+ + + S + +S+
Sbjct: 166 DIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIR 225
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 226 EMFAYARDHQP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQMDGF- 276
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
G K+ + TN D +DPALLR GR+DR + +
Sbjct: 277 DALGQVKM-IMATNRPDTLDPALLRPGRLDRKLEI 310
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 158 (60.7 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 55/153 (35%), Positives = 82/153 (53%)
Query: 211 YRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL------ 264
Y++IG RG LLYGPPGTGK+ L A+A++ + + VV S+ +YL
Sbjct: 176 YKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAF----IRVVGSEFVQKYLGEGPRL 231
Query: 265 ------LLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
L + +I+ +++ID +I + ++Q G AD R Q L LLN +DG
Sbjct: 232 VRDVFRLARENSPAIIFIDEID-AIATKRFDAQTG---AD--REVQRILMELLNQMDGFD 285
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ K+ + TN +D +DPALLR GR+DR I
Sbjct: 286 VSV-NVKV-IMATNRQDTLDPALLRPGRLDRKI 316
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 162 (62.1 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 57/184 (30%), Positives = 85/184 (46%)
Query: 179 DHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAA 238
D + F + + KE ++ + F + ++Y ++G RG +L GPPGTGK+ L A
Sbjct: 290 DIKIKFADVAGVDEAKEEIMEFVK-FLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKA 348
Query: 239 MANYMNYDIYN------LNLSVVTSDSSLEYLLLHVPNRS--ILVVEDIDCSIKLQNRES 290
A N + L + V S + L + I+ +++ID K + R
Sbjct: 349 TAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGG 408
Query: 291 QKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFT-TNYKDRIDPALLRAGRMDR 349
Q G ++ R + TL LL +DG E I VF TN D +DPALLR GR DR
Sbjct: 409 QFG---SNDER--ESTLNQLLVEMDGFT---SSEHIVVFAGTNRPDVLDPALLRPGRFDR 460
Query: 350 HINL 353
I +
Sbjct: 461 QITI 464
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 157 (60.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 57/160 (35%), Positives = 81/160 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
+ YR+IG RG LLYGPPGTGK+ L+ A+AN + + VV S+ +YL
Sbjct: 158 DLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANF----IRVVGSEFVQKYLGEGP 213
Query: 265 -----LLHVPNRS---ILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
+ + + I+ +++ID +I + ++Q G AD R Q L LL +DG
Sbjct: 214 RMVRDVFRMARENAPAIIFIDEID-AIATKRFDAQTG---AD--REVQRILIELLTQMDG 267
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL-SY 355
G + TN D +DPALLR GR+DR I SY
Sbjct: 268 F--DQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSY 305
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 158 (60.7 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 54/155 (34%), Positives = 80/155 (51%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
EYY ++G +G +LYG PGTGK+ L A+AN + L +V S+ +YL
Sbjct: 212 EYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATF----LRIVGSELIQKYLGDGP 267
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L V SI+ +++ID ++ + +S G E R Q T+ LLN +DG
Sbjct: 268 KMVRELFRVAEENAPSIVFIDEID-AVGTKRYDSNSGGE-----REIQRTMLELLNQLDG 321
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
GD K+ + TN + +DPAL+R GR+DR I
Sbjct: 322 F-DSRGDVKV-LMATNRIESLDPALIRPGRIDRKI 354
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 157 (60.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 67/223 (30%), Positives = 108/223 (48%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y ++G +G +LYG PGTGK+ L A+AN + L +V S+ +YL
Sbjct: 206 ELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATF----LRIVGSELIQKYLGDGP 261
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
+ V SI+ +++ID +I + +S G E R Q T+ LLN +DG
Sbjct: 262 RLCRQIFKVAGENAPSIVFIDEID-AIGTKRYDSNSGGE-----REIQRTMLELLNQLDG 315
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDL 376
GD K+ + TN + +DPAL+R GR+DR I ST K++ + +
Sbjct: 316 F-DDRGDVKV-IMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSE 373
Query: 377 YCHIEKLME-KVKVSPAEV------AGEL-MKAKGSKTSLEDF 411
++E L+ K +S A++ AG L ++ + + + EDF
Sbjct: 374 DVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDF 416
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 157 (60.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 47/150 (31%), Positives = 78/150 (52%)
Query: 211 YRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL----E 262
+RK+G +G L++GPPGTGK+ L A A N L + + D +
Sbjct: 211 FRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDA 270
Query: 263 YLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCG 322
+ L + +I+ ++++D +I + +S+K + R Q T+ LLN +DG
Sbjct: 271 FALAKEKSPAIIFIDELD-AIGTKRFDSEKAGD-----REVQRTMLELLNQLDGF---SS 321
Query: 323 DEKITVFT-TNYKDRIDPALLRAGRMDRHI 351
D+++ V TN D +DPALLR+GR+DR +
Sbjct: 322 DDRVKVIAATNRVDTLDPALLRSGRLDRKL 351
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 160 (61.4 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 58/205 (28%), Positives = 89/205 (43%)
Query: 178 LDHPMTFGTLVMDGDLKETVLNDL-DCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLI 236
++ P T VM + + L DL D R ++YYR+ V +G LL GPPGTGK+ L
Sbjct: 156 VERPNTTFADVMGAEEAKGELQDLVDFLRNPEKYYRR-NIVMPKGILLVGPPGTGKTLLA 214
Query: 237 AAMANYMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEP 296
++A +N S ++ + V ++ C + + +S G
Sbjct: 215 KSLAGEARVSFITINGSEF-EEAFVGVGAKRVRELFEAARKNSPCIVFIDEIDSVGGSRT 273
Query: 297 ADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFT-TNYKDRIDPALLRAGRMDRHINLSY 355
P L LL +DG G E + V TNY+D +D AL+R+GR DR I +
Sbjct: 274 KRVNYHPSEALNQLLVELDGF---DGREGVMVMAATNYQDSLDTALIRSGRFDRIIQVPL 330
Query: 356 CTFSTFKQLAANYLDINDHDLYCHI 380
K + +YL D + H+
Sbjct: 331 PDGKARKSIIDHYL--KDKPIASHV 353
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 156 (60.0 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 56/163 (34%), Positives = 79/163 (48%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYLLLHV 268
E Y IG +G +LYG PGTGK+ L A+AN + L VV S+ +YL
Sbjct: 212 ELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATF----LRVVGSELIQKYLG-DG 266
Query: 269 PN--RSIL-VVEDIDCSIKLQNRESQKGDEPADSYRGP----QVTLAGLLNAIDGLLCCC 321
P R + V +D+ SI + G + D+ G Q T+ LLN +DG
Sbjct: 267 PKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGF-DSR 325
Query: 322 GDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQL 364
GD K+ + TN + +DPALLR GR+DR I T +++
Sbjct: 326 GDVKV-ILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRI 367
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 155 (59.6 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 53/155 (34%), Positives = 79/155 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTS----DSS---- 260
E + ++G +G LLYGPPGTGK+ L A+A+ ++ + + S + +S+
Sbjct: 163 ELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIR 222
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 223 EMFNYAREHQP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQLDGF- 273
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
G K+ + TN D +DPALLR GR+DR I +
Sbjct: 274 DQLGKVKM-IMATNRPDVLDPALLRPGRLDRKIEI 307
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 155 (59.6 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 53/155 (34%), Positives = 79/155 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTS----DSS---- 260
E + ++G +G LLYGPPGTGK+ L A+A+ ++ + + S + +S+
Sbjct: 163 ELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIR 222
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 223 EMFNYAREHQP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQLDGF- 273
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
G K+ + TN D +DPALLR GR+DR I +
Sbjct: 274 DNLGKVKM-IMATNRPDVLDPALLRPGRLDRKIEI 307
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 155 (59.6 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 55/173 (31%), Positives = 88/173 (50%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G LLYGPPGTGK+ L A+A++ +
Sbjct: 150 LDKQIKE-IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 208
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + S + E ++ H P SI+ +++ID SI ES G ++
Sbjct: 209 RVSGSELVQKYIGEGSRMVRELFIMAREHAP--SIIFMDEID-SIGSSRGESGSGGGDSE 265
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
R T+ LLN +DG + K+ + TN D +DPALLR GR+DR I
Sbjct: 266 VQR----TMLELLNQLDGFEST-KNIKV-LMCTNRIDILDPALLRPGRIDRKI 312
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 155 (59.6 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 52/151 (34%), Positives = 74/151 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLE------ 262
+ Y +IG RG LLYGPPGTGK+ L+ A+AN +N S E
Sbjct: 196 DLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVR 255
Query: 263 --YLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCC 320
+ L SI+ ++++D SI + ++Q G + R Q L LL +DG
Sbjct: 256 DVFRLARENAPSIIFIDEVD-SIATKRFDAQTGSD-----REVQRILIELLTQMDGFDQS 309
Query: 321 CGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ K+ + TN D +DPALLR GR+DR I
Sbjct: 310 T-NVKV-IMATNRADTLDPALLRPGRLDRKI 338
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 154 (59.3 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 56/174 (32%), Positives = 87/174 (50%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G LLYGPPGTGK+ L A+A++ +
Sbjct: 166 LDQQIKE-IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 224
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + S + E ++ H P SI+ +++ID SI ES G+ ++
Sbjct: 225 RVSGSELVQKYIGEGSRMVRELFVMAREHAP--SIIFMDEID-SIGSARMESGSGNGDSE 281
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVF-TTNYKDRIDPALLRAGRMDRHI 351
R T+ LLN +DG KI V TN D +D ALLR GR+DR I
Sbjct: 282 VQR----TMLELLNQLDGFEA---SNKIKVLMATNRIDILDQALLRPGRIDRKI 328
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 154 (59.3 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 56/174 (32%), Positives = 87/174 (50%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G LLYGPPGTGK+ L A+A++ +
Sbjct: 166 LDQQIKE-IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 224
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + S + E ++ H P SI+ +++ID SI ES G+ ++
Sbjct: 225 RVSGSELVQKYIGEGSRMVRELFVMAREHAP--SIIFMDEID-SIGSARMESGSGNGDSE 281
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVF-TTNYKDRIDPALLRAGRMDRHI 351
R T+ LLN +DG KI V TN D +D ALLR GR+DR I
Sbjct: 282 VQR----TMLELLNQLDGFEA---SNKIKVLMATNRIDILDQALLRPGRIDRKI 328
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 153 (58.9 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 51/153 (33%), Positives = 79/153 (51%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLS-----VVTSDSSL-- 261
E + +G +G LLYGPPGTGK+ L A+A++ + ++ S + S +
Sbjct: 169 ELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVR 228
Query: 262 EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
E ++ H P SI+ +++ID SI +S G ++ R T+ LLN +DG
Sbjct: 229 ELFVMAREHAP--SIIFMDEID-SIGSSRSDSSGGSGDSEVQR----TMLELLNQLDGFE 281
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ K+ + TN D +DPALLR GR+DR I
Sbjct: 282 AT-KNIKV-IMATNRIDILDPALLRPGRIDRKI 312
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 152 (58.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 53/155 (34%), Positives = 79/155 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTS----DSS---- 260
E + ++G +G LLYGPPGTGK+ L A+A+ ++ + + S + +S+
Sbjct: 164 ELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIR 223
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P I+ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 224 EMFGYARDHQP--CIIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQLDGF- 274
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
G K+ + TN D +DPALLR GR+DR I +
Sbjct: 275 DELGKVKM-IMATNRPDVLDPALLRPGRLDRKIEI 308
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 56/160 (35%), Positives = 81/160 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
+ Y++IG RG LL+GPPG GK+ L A+A++ + VV S+ +YL
Sbjct: 176 QLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASF----IRVVGSEFVQKYLGEGP 231
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L + + SI+ +++ID +I + ++Q G AD R Q L LLN +DG
Sbjct: 232 RMVRDLFRLAKQNSPSIIFIDEID-AIATKRFDAQTG---AD--REVQRILLELLNQMDG 285
Query: 317 LLCCCGDEKITV---FTTNYKDRIDPALLRAGRMDRHINL 353
DE + TN D +DPALLR GR+DR I L
Sbjct: 286 F-----DETTNIKVIMATNRADTLDPALLRPGRLDRKIEL 320
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 61/206 (29%), Positives = 101/206 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y ++G +G +LYG PGTGK+ L A+AN + L VV S+ +YL
Sbjct: 215 ELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATF----LRVVGSELIQKYLGDGP 270
Query: 265 -----LLHVPNR---SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L + SI+ +++ID +I + ++Q G E R Q T+ LLN +DG
Sbjct: 271 RLVRQLFNAAEEHSPSIVFIDEID-AIGTKRYDAQSGAE-----REIQRTMLELLNQLDG 324
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDL 376
D K+ + T D +DPAL+R GR+DR I +T +++ + +
Sbjct: 325 FDTSQRDIKVIMATNRISD-LDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGE 383
Query: 377 YCHIEKLME-KVKVSPAEVAGELMKA 401
++E+L++ K +S AE+ + +A
Sbjct: 384 DVNLEELIQCKDDLSGAEIKAIVSEA 409
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 57/173 (32%), Positives = 87/173 (50%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G LLYGPPGTGK+ L A+A++
Sbjct: 153 LDKQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFI 211
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + S + E ++ H P SI+ +++ID SI ES G D
Sbjct: 212 RVSGSELVQKFIGEGSRMVRELFVMAREHAP--SIIFMDEID-SIGSSRIESGSG---GD 265
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
S Q T+ LLN +DG + K+ + TN D +DPALLR GR+DR I
Sbjct: 266 SE--VQRTMLELLNQLDGFEAT-KNIKV-IMATNRIDILDPALLRPGRIDRKI 314
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 59/204 (28%), Positives = 93/204 (45%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + IG +G L+YGPPGTGK+ L A A N L + + D +
Sbjct: 191 KERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAKLV 250
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQ-KGDEPADSYRGPQVTLAGLLNAIDGLL 318
+ L +I+ ++++D +I + +S+ GD R Q T+ LLN +DG
Sbjct: 251 RDAFALAKEKGPTIIFIDELD-AIGTKRFDSEVSGD------REVQRTMLELLNQLDGF- 302
Query: 319 CCCGDEKITVFT-TNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLY 377
D I V TN D +DPALLR+GR+DR I ++ A+ L I+ +
Sbjct: 303 --SSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPN----EEARAHILQIHSRKMN 356
Query: 378 CHIEKLMEKVKVSPAEVAGELMKA 401
+ +++ S + G +KA
Sbjct: 357 VSADVNFDELARSSEDFNGAQLKA 380
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 151 (58.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 52/158 (32%), Positives = 80/158 (50%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYD-IYNLNLSVVTS---DSS- 260
+ E ++++G +G LLYGPPGTGK+ L A+A + + I++ +V +S+
Sbjct: 202 KNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESAR 261
Query: 261 -----LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAID 315
Y H P I+ ++++D + R +G AD R Q TL LL +D
Sbjct: 262 IIREMFAYAKEHEP--CIIFMDEVDA---IGGRRFSEGTS-AD--REIQRTLMELLTQMD 313
Query: 316 GLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
G G KI + TN D +DPALLR GR+DR + +
Sbjct: 314 GF-DNLGQTKI-IMATNRPDTLDPALLRPGRLDRKVEI 349
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 52/155 (33%), Positives = 77/155 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTS----DSS---- 260
E + ++G +G LLYGPPGTGK+ L A+A+ + + + S + +S+
Sbjct: 161 ELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIR 220
Query: 261 --LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
Y H P ++ +++ID + R +G AD R Q TL LLN +DG
Sbjct: 221 EMFGYARDHQP--CVIFMDEIDA---IGGRRFSEGTS-AD--REIQRTLMELLNQMDGF- 271
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
KI + TN D +DPALLR GR+DR I +
Sbjct: 272 DTLSKVKI-IMATNRPDVLDPALLRPGRLDRKIEI 305
>TAIR|locus:2046992 [details] [associations]
symbol:AT2G20950 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=ISM] EMBL:CP002685 InterPro:IPR007942 Pfam:PF05278
IPI:IPI00548913 RefSeq:NP_973501.1 UniGene:At.39631 PRIDE:F4IFM0
EnsemblPlants:AT2G20950.4 GeneID:816629 KEGG:ath:AT2G20950
OMA:SERIPNS PhylomeDB:F4IFM0 Uniprot:F4IFM0
Length = 530
Score = 152 (58.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 30/98 (30%), Positives = 54/98 (55%)
Query: 470 NVGGYSVKAEFANIIKAIFSKHGDIAANSCLQSKQCRSSLLEIVCRIIXXXXXXXXXXXX 529
+V Y V+ A ++AI KHGDIAA+S LQS RS LE + +
Sbjct: 349 SVANYKVRMSIAATLEAIIDKHGDIAASSKLQSTSTRSFYLESLAAAVMELKSTALRDLT 408
Query: 530 ETELKSMLSELQDLESMRLEVGWLRKRLDEIVEAMRLF 567
+T + + + ++D++S++++V WL+ + E+ EA+ +
Sbjct: 409 KTRVAEIAAVVKDMDSVKIDVSWLKTAVTELAEAVEYY 446
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 55/157 (35%), Positives = 81/157 (51%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y ++G +G +LYG PGTGK+ L A+AN + L +V S+ +YL
Sbjct: 228 ELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATF----LRIVGSELIQKYLGDGP 283
Query: 265 -LL---------HVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAI 314
L+ H P SI+ +++ID +I + +S G E R Q T+ LLN +
Sbjct: 284 RLVRQIFQVAAEHAP--SIVFIDEID-AIGTKRYDSTSGGE-----REIQRTMLELLNQL 335
Query: 315 DGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
DG GD K+ + TN + +DPAL+R GR+DR I
Sbjct: 336 DGF-DDRGDVKV-IMATNKIETLDPALIRPGRIDRKI 370
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y ++G +G +LYG PGTGK+ L A+AN + L +V S+ +YL
Sbjct: 210 ELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATF----LRIVGSELIQKYLGDGP 265
Query: 265 -LL---------HVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAI 314
L H P SI+ +++ID +I + ES G E R Q T+ LLN +
Sbjct: 266 RLCRQIFQIAADHAP--SIVFIDEID-AIGTKRYESTSGGE-----REIQRTMLELLNQL 317
Query: 315 DGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
DG GD K+ + TN + +DPAL+R GR+DR I
Sbjct: 318 DGF-DDRGDIKV-IMATNKIESLDPALIRPGRIDRKI 352
>TAIR|locus:2121159 [details] [associations]
symbol:AT4G38550 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006612 "protein targeting
to membrane" evidence=RCA] [GO:0009627 "systemic acquired
resistance" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
[GO:0031347 "regulation of defense response" evidence=RCA]
EMBL:CP002687 InterPro:IPR007942 Pfam:PF05278 EMBL:AF360282
EMBL:BT000695 EMBL:BT001966 IPI:IPI00547260 RefSeq:NP_195567.2
UniGene:At.19022 UniGene:At.74802 IntAct:Q9C5F6 STRING:Q9C5F6
PRIDE:Q9C5F6 EnsemblPlants:AT4G38550.1 GeneID:830012
KEGG:ath:AT4G38550 TAIR:At4g38550 OMA:RSNHGKE PhylomeDB:Q9C5F6
ProtClustDB:CLSN2690367 Genevestigator:Q9C5F6 Uniprot:Q9C5F6
Length = 612
Score = 152 (58.6 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 35/117 (29%), Positives = 64/117 (54%)
Query: 451 KSGVQDQSSHTETEAADMGNVGGYSVKAEFANIIKAIFSKHGDIAANSCLQSKQCRSSLL 510
+SG +++S +EA +V Y V+ + ++AI KHGDIAA+S LQ+ RS L
Sbjct: 414 ESG-KEESQSMISEA--YVSVANYRVRQSVSETLQAIIDKHGDIAASSKLQAMATRSYYL 470
Query: 511 EIVCRIIXXXXXXXXXXXXETELKSMLSELQDLESMRLEVGWLRKRLDEIVEAMRLF 567
E + ++ +T + + + ++D+ES+++ V WL+ + E+ EA+ F
Sbjct: 471 ESLAAVVMELKKTVLRDLTKTRVAEIAAVVKDMESVKINVSWLKTAVTELAEAVEYF 527
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 146 (56.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 53/186 (28%), Positives = 85/186 (45%)
Query: 175 GVNLDHPMTFGTLVMDGDLKETVLNDLDCF---RRGKEYYRKIGKVWKRGYLLYGPPGTG 231
GVN D + TL + D + + ++ KE + +G +G L+YGPPGTG
Sbjct: 117 GVNKDSYLILETLPTEYDSRVKAMELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTG 176
Query: 232 KSSLIAAMANYMNYDIYNLN----LSVVTSDSSL----EYLLLHVPNRSILVVEDIDCSI 283
K+ L A A L + + D + + L SI+ ++++D +I
Sbjct: 177 KTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD-AI 235
Query: 284 KLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLR 343
+ +S+K + R Q T+ LLN +DG + + TN D +DPALLR
Sbjct: 236 GTKRFDSEKAGD-----REVQRTMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLR 288
Query: 344 AGRMDR 349
+GR+DR
Sbjct: 289 SGRLDR 294
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 151 (58.2 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 53/153 (34%), Positives = 75/153 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYN-----LNLSVVTSDSSLE- 262
E + K+G +G LLYGPPGTGK+ L A+A N L + +SL
Sbjct: 194 ELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVK 253
Query: 263 --YLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCC 320
+ L SI+ +++ID +I + ++ G + R Q TL LL +DG
Sbjct: 254 DIFKLAKEKAPSIIFIDEID-AIAAKRTDALTGGD-----REVQRTLMQLLAEMDGF-DA 306
Query: 321 CGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
GD KI + TN D +DPA+LR GR DR I +
Sbjct: 307 RGDVKI-IGATNRPDILDPAILRPGRFDRIIEV 338
Score = 41 (19.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 380 IEKLMEKVKVSPAEVA 395
+EK+MEK KV E A
Sbjct: 408 VEKIMEKKKVKVKEPA 423
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 158 (60.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 59/222 (26%), Positives = 105/222 (47%)
Query: 141 KKYLVHVLEMAKMFKDRNRIVRFHTIRHDRWSSSGVNLDHPMTFGTLVMDGDLKE-TVLN 199
K YL H L++A + R + ++ D + G + + G KE +L
Sbjct: 350 KVYLHHTLDLASEIQGRTFV---QGLQFDEGENVGCEISK--------LGGLSKEYAILR 398
Query: 200 DLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN-LSVVT-- 256
D+ K +G +G L++GPPGTGK+SL A + + +++N +++
Sbjct: 399 DIIDSSSIKNSLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQY 458
Query: 257 ---SDSSLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLL 311
S+ +L+ + N + ++ ++D+D +I +E G+E + Q +A LL
Sbjct: 459 LGESEKALDEVFRSASNATPAVVFIDDLD-AIAPARKEG--GEELS------QRMVATLL 509
Query: 312 NAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
N +DG+ D + + TN D I+PAL R GR+DR I +
Sbjct: 510 NLMDGISRT--DGVVVIAATNRPDSIEPALRRPGRLDREIEI 549
Score = 44 (20.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 443 QENGNNISKSGVQDQSSHT 461
Q NGN+ S+ ++ Q HT
Sbjct: 673 QNNGNSCSEQMLRKQGEHT 691
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 148 (57.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 55/155 (35%), Positives = 80/155 (51%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y++IG RG L+YGPPG GK+ L A+A++ + VV S+ +YL
Sbjct: 184 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASF----IRVVGSEFVQKYLGEGP 239
Query: 265 -------LLHVPNR-SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L N +I+ +++ID +I + ++Q G AD R Q L LLN +DG
Sbjct: 240 RMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQTG---AD--REVQRILLELLNQMDG 293
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ K+ + TN D +DPALLR GR+DR I
Sbjct: 294 FDQTT-NVKV-IMATNRADTLDPALLRPGRLDRKI 326
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 148 (57.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 56/158 (35%), Positives = 80/158 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y++IG RG L+YGPPG GK+ L A+A++ + VV S+ +YL
Sbjct: 188 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAF----IRVVGSEFVQKYLGEGP 243
Query: 265 -------LLHVPNR-SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L N +I+ +++ID +I + ++Q G AD R Q L LLN +DG
Sbjct: 244 RMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQTG---AD--REVQRILLELLNQMDG 297
Query: 317 LLCCCGDEKITV---FTTNYKDRIDPALLRAGRMDRHI 351
D+ + V TN D +DPALLR GR+DR I
Sbjct: 298 F-----DQNVNVKVIMATNRADTLDPALLRPGRLDRKI 330
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 147 (56.8 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 54/158 (34%), Positives = 80/158 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y++IG RG L+YGPPG GK+ L +A++M + VV S+ +YL
Sbjct: 138 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKTVAHHMIAAF----IHVVGSEFVHKYLGEGP 193
Query: 265 -----LLHVPNRS---ILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
+ H+ + I+ +++ID +I + ++Q G AD R Q L LLN +DG
Sbjct: 194 RIIWDVFHLDKENAPAIIFIDEID-AIATKRFDAQTG---AD--REVQRILLELLNQMDG 247
Query: 317 LLCCCGDEKITV---FTTNYKDRIDPALLRAGRMDRHI 351
D+ I+V TN KD +DP LLR G +D I
Sbjct: 248 F-----DQNISVKAIMATNRKDTLDPTLLRPGHLDHKI 280
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 148 (57.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 56/158 (35%), Positives = 80/158 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y++IG RG L+YGPPG GK+ L A+A++ + VV S+ +YL
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAF----IRVVGSEFVQKYLGEGP 244
Query: 265 -------LLHVPNR-SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L N +I+ +++ID +I + ++Q G AD R Q L LLN +DG
Sbjct: 245 RMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQTG---AD--REVQRILLELLNQMDG 298
Query: 317 LLCCCGDEKITV---FTTNYKDRIDPALLRAGRMDRHI 351
D+ + V TN D +DPALLR GR+DR I
Sbjct: 299 F-----DQNVNVKVIMATNRADTLDPALLRPGRLDRKI 331
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 148 (57.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 56/158 (35%), Positives = 80/158 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y++IG RG L+YGPPG GK+ L A+A++ + VV S+ +YL
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAF----IRVVGSEFVQKYLGEGP 244
Query: 265 -------LLHVPNR-SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L N +I+ +++ID +I + ++Q G AD R Q L LLN +DG
Sbjct: 245 RMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQTG---AD--REVQRILLELLNQMDG 298
Query: 317 LLCCCGDEKITV---FTTNYKDRIDPALLRAGRMDRHI 351
D+ + V TN D +DPALLR GR+DR I
Sbjct: 299 F-----DQNVNVKVIMATNRADTLDPALLRPGRLDRKI 331
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 148 (57.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 56/158 (35%), Positives = 80/158 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y++IG RG L+YGPPG GK+ L A+A++ + VV S+ +YL
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAF----IRVVGSEFVQKYLGEGP 244
Query: 265 -------LLHVPNR-SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L N +I+ +++ID +I + ++Q G AD R Q L LLN +DG
Sbjct: 245 RMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQTG---AD--REVQRILLELLNQMDG 298
Query: 317 LLCCCGDEKITV---FTTNYKDRIDPALLRAGRMDRHI 351
D+ + V TN D +DPALLR GR+DR I
Sbjct: 299 F-----DQNVNVKVIMATNRADTLDPALLRPGRLDRKI 331
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 148 (57.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 56/158 (35%), Positives = 80/158 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y++IG RG L+YGPPG GK+ L A+A++ + VV S+ +YL
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAF----IRVVGSEFVQKYLGEGP 244
Query: 265 -------LLHVPNR-SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L N +I+ +++ID +I + ++Q G AD R Q L LLN +DG
Sbjct: 245 RMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQTG---AD--REVQRILLELLNQMDG 298
Query: 317 LLCCCGDEKITV---FTTNYKDRIDPALLRAGRMDRHI 351
D+ + V TN D +DPALLR GR+DR I
Sbjct: 299 F-----DQNVNVKVIMATNRADTLDPALLRPGRLDRKI 331
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 148 (57.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 56/158 (35%), Positives = 80/158 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y++IG RG L+YGPPG GK+ L A+A++ + VV S+ +YL
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAF----IRVVGSEFVQKYLGEGP 244
Query: 265 -------LLHVPNR-SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L N +I+ +++ID +I + ++Q G AD R Q L LLN +DG
Sbjct: 245 RMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQTG---AD--REVQRILLELLNQMDG 298
Query: 317 LLCCCGDEKITV---FTTNYKDRIDPALLRAGRMDRHI 351
D+ + V TN D +DPALLR GR+DR I
Sbjct: 299 F-----DQNVNVKVIMATNRADTLDPALLRPGRLDRKI 331
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 148 (57.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 56/158 (35%), Positives = 80/158 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y++IG RG L+YGPPG GK+ L A+A++ + VV S+ +YL
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAF----IRVVGSEFVQKYLGEGP 244
Query: 265 -------LLHVPNR-SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L N +I+ +++ID +I + ++Q G AD R Q L LLN +DG
Sbjct: 245 RMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQTG---AD--REVQRILLELLNQMDG 298
Query: 317 LLCCCGDEKITV---FTTNYKDRIDPALLRAGRMDRHI 351
D+ + V TN D +DPALLR GR+DR I
Sbjct: 299 F-----DQNVNVKVIMATNRADTLDPALLRPGRLDRKI 331
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 163 (62.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 71/256 (27%), Positives = 114/256 (44%)
Query: 139 VKKKYLVHVLEMAKMFKDRNRIVRFHTIRHDRWSSSGVNLDHPMTFGTLVMDGDLKETVL 198
+K K+ H L + R R V+ T+ W+ G G + LKET+L
Sbjct: 904 IKAKHFQHALNICNPSSLRERQVQIPTVT---WNDIG---------GMNEVKEQLKETIL 951
Query: 199 NDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN-LSVVT- 256
L+ K Y K + +G LLYGPPG GK+ L A+AN + ++ ++T
Sbjct: 952 YPLEY----KHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTM 1007
Query: 257 ----SDSSLEYLL--LHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGL 310
S++++ L + I+ ++ID K R S ++ +D + +
Sbjct: 1008 WFGESEANVRDLFDKARAASPCIIFFDEIDSLAK--ERNSNTNNDASDR------VINQI 1059
Query: 311 LNAIDGLLCCCGDEKITVF---TTNYKDRIDPALLRAGRMDRHINLSY----CTFSTFKQ 363
L IDG+ +EK T+F TN D +D AL R GR+D+ I +S +S FK
Sbjct: 1060 LTEIDGI-----NEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKA 1114
Query: 364 LAANYL---DINDHDL 376
+ N D++ HD+
Sbjct: 1115 ILKNTPLNEDVDIHDM 1130
Score = 134 (52.2 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 45/153 (29%), Positives = 75/153 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LS--VVTSDSSLE 262
E + IG +G L++G PGTGK+S+ A+AN N Y +N +S + S+ L
Sbjct: 551 EIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLR 610
Query: 263 YLLLHVPNRS--ILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCC 320
+ ++ I+ +++ID + N+ S+ +E ++ LL +DGL
Sbjct: 611 KIFKKASEKTPCIIFIDEID---SIANKRSKSNNELEKR------VVSQLLTLMDGLKK- 660
Query: 321 CGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
+ + + TN + IDPAL R GR DR I +
Sbjct: 661 -NNNVLVLAATNRPNSIDPALRRFGRFDREIEI 692
Score = 40 (19.1 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 31/96 (32%), Positives = 39/96 (40%)
Query: 37 FSTEITMIIKESHDGSTNRLFKAVV----TYLDGHALSNSVLPKRLTVGKNE---NVRNF 89
F EI I + S N L K VV T +DG +N+VL T N +R F
Sbjct: 625 FIDEIDSIANK-RSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRF 683
Query: 90 TYGLERNSEI-VDVFQG-------VTMKWKFNSDIN 117
+R EI V QG T K K + D+N
Sbjct: 684 GR-FDREIEIPVPDEQGRYEILLTKTKKMKLDPDVN 718
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 163 (62.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 71/256 (27%), Positives = 114/256 (44%)
Query: 139 VKKKYLVHVLEMAKMFKDRNRIVRFHTIRHDRWSSSGVNLDHPMTFGTLVMDGDLKETVL 198
+K K+ H L + R R V+ T+ W+ G G + LKET+L
Sbjct: 904 IKAKHFQHALNICNPSSLRERQVQIPTVT---WNDIG---------GMNEVKEQLKETIL 951
Query: 199 NDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN-LSVVT- 256
L+ K Y K + +G LLYGPPG GK+ L A+AN + ++ ++T
Sbjct: 952 YPLEY----KHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTM 1007
Query: 257 ----SDSSLEYLL--LHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGL 310
S++++ L + I+ ++ID K R S ++ +D + +
Sbjct: 1008 WFGESEANVRDLFDKARAASPCIIFFDEIDSLAK--ERNSNTNNDASDR------VINQI 1059
Query: 311 LNAIDGLLCCCGDEKITVF---TTNYKDRIDPALLRAGRMDRHINLSY----CTFSTFKQ 363
L IDG+ +EK T+F TN D +D AL R GR+D+ I +S +S FK
Sbjct: 1060 LTEIDGI-----NEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKA 1114
Query: 364 LAANYL---DINDHDL 376
+ N D++ HD+
Sbjct: 1115 ILKNTPLNEDVDIHDM 1130
Score = 134 (52.2 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 45/153 (29%), Positives = 75/153 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LS--VVTSDSSLE 262
E + IG +G L++G PGTGK+S+ A+AN N Y +N +S + S+ L
Sbjct: 551 EIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLR 610
Query: 263 YLLLHVPNRS--ILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCC 320
+ ++ I+ +++ID + N+ S+ +E ++ LL +DGL
Sbjct: 611 KIFKKASEKTPCIIFIDEID---SIANKRSKSNNELEKR------VVSQLLTLMDGLKK- 660
Query: 321 CGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
+ + + TN + IDPAL R GR DR I +
Sbjct: 661 -NNNVLVLAATNRPNSIDPALRRFGRFDREIEI 692
Score = 40 (19.1 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 31/96 (32%), Positives = 39/96 (40%)
Query: 37 FSTEITMIIKESHDGSTNRLFKAVV----TYLDGHALSNSVLPKRLTVGKNE---NVRNF 89
F EI I + S N L K VV T +DG +N+VL T N +R F
Sbjct: 625 FIDEIDSIANK-RSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRF 683
Query: 90 TYGLERNSEI-VDVFQG-------VTMKWKFNSDIN 117
+R EI V QG T K K + D+N
Sbjct: 684 GR-FDREIEIPVPDEQGRYEILLTKTKKMKLDPDVN 718
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 151 (58.2 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 62/222 (27%), Positives = 98/222 (44%)
Query: 140 KKKYLVHVLEMAKMFKDRNRIVRFHTIRHDRWSSSGVNLDHPMTFGTLVMDGDLKETVLN 199
+KKYL+ + + + K N H + S V+ D G L D+KE +
Sbjct: 533 EKKYLIEIEDFRESIK--NNPASILKGEHLVENISNVSWDD---IGGL---DDIKEELRQ 584
Query: 200 DLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTS-- 257
++ KE + K G +G +LYGPPG K++L+ A+A+ +L+ + + S
Sbjct: 585 AIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSSKLSFLSLSGATIFSPY 644
Query: 258 --DSSLEYLLLHVPNR----SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLL 311
DS + R SIL ++ID + +N + A S L+ L
Sbjct: 645 LGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGDNAQSR-----VLSTFL 699
Query: 312 NAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
N +DG+ G I + TN D ID ALLR GR D+ + +
Sbjct: 700 NEMDGVEQLNG--VIVIGATNRLDMIDNALLRPGRFDKILEI 739
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 151 (58.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 53/170 (31%), Positives = 82/170 (48%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN 251
+ K+ V+ + F + E Y K+G RG +L GPPGTGK+ L A A Y+++
Sbjct: 380 EAKQEVMEFVK-FLQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYSVS 438
Query: 252 LS------VVTSDSSLEYLLLHVPNR--SILVVEDIDCSIKLQNRESQKGDEPADSYRGP 303
S V S + L SI+ V++ID K +++ + G A+ R
Sbjct: 439 GSEFVEMFVGVGASRVRDLFKTARENAPSIVFVDEIDAIGKQRSKGNATG---ANDER-- 493
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
+ TL LL +DG D + + TN D +D AL+R GR DRH+++
Sbjct: 494 ETTLNQLLVEMDGF--DTSDHVVVLAGTNRPDILDRALMRPGRFDRHVHI 541
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 151 (58.2 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 49/169 (28%), Positives = 82/169 (48%)
Query: 204 FRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLS------VVTS 257
F + E ++K+G RG +L GPPGTGK+ L A A ++++ S V
Sbjct: 420 FLKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATAGESGVPFFSVSGSEFVEMFVGVG 479
Query: 258 DSSLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAID 315
S + L + + I+ +++ID K ++ ++ G + R + TL +L +D
Sbjct: 480 PSRVRDLFANARKNTPCIIFIDEIDAIGKSRSAKNFSG---GNDER--ESTLNQILTEMD 534
Query: 316 GLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQL 364
G D+ + + TN D +D AL+R GR DRHI++ T KQ+
Sbjct: 535 GFNT--SDQVVVLAGTNRPDVLDKALMRPGRFDRHISIDRPTMDGRKQI 581
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 149 (57.5 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 55/173 (31%), Positives = 88/173 (50%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G LLYGPPGTGK+ L A+A++ +
Sbjct: 137 LDQQIKE-IKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCRFI 195
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + S + E ++ H P SI+ +++ID SI +R G ++
Sbjct: 196 RVSGSELVQKYIGEGSRMVRELFVMAREHAP--SIIFMDEID-SIG-SSRIDSAGSGDSE 251
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
R T+ LLN +DG + KI + TN D +DPALLR GR+DR I
Sbjct: 252 VQR----TMLELLNQLDGFEPT-KNIKI-IMATNRLDILDPALLRPGRIDRKI 298
Score = 39 (18.8 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 29 YIWSITRRFSTEITMIIKESHDGSTNRLFKAVVTYLDGHALSNSVLPKRLTVGKNENVRN 88
Y+ + + ST+ +++K +G K VV DG + +LTVGK + +
Sbjct: 55 YVGEVVKVMSTK-KVLVKVHPEG------KYVVDIADGVDIG------KLTVGKRVALLS 101
Query: 89 FTYGLER 95
+Y LE+
Sbjct: 102 DSYKLEK 108
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 150 (57.9 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 56/188 (29%), Positives = 83/188 (44%)
Query: 173 SSGVNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGK 232
S V TF + + KE ++ + F + Y+K+G +G +L GPPGTGK
Sbjct: 342 SKAVKATSTTTFKDVAGMDEAKEEIMEFVS-FLKDPSRYKKLGARIPKGAILSGPPGTGK 400
Query: 233 SSLIAAMANYMNYDIYNLNLS------VVTSDSSLEYLLLHVPNRS--ILVVEDIDCSIK 284
+ L A A + Y ++ S V S + L + I+ +++ID +
Sbjct: 401 TLLAKATAGEAGVNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTPCIVFIDEIDAVGR 460
Query: 285 LQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFT-TNYKDRIDPALLR 343
++R DE + TL LL +DG G + VF TN D +DPALLR
Sbjct: 461 ARSRGGFHNDEREN-------TLNQLLVEMDGFSSTSG---VVVFAGTNRSDVLDPALLR 510
Query: 344 AGRMDRHI 351
GR DR I
Sbjct: 511 PGRFDRQI 518
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 145 (56.1 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 52/153 (33%), Positives = 77/153 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN-----LSVVTSDSSL-- 261
E + +G +G +LYGPPGTGK+ L A+A++ + ++ + S +
Sbjct: 172 ELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVR 231
Query: 262 EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
E ++ H P SI+ +++ID SI E G DS Q T+ LLN +DG
Sbjct: 232 ELFVMAREHAP--SIIFMDEID-SIGSTRVEGSGG---GDSE--VQRTMLELLNQLDGFE 283
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ KI + TN D +DPALLR GR+DR I
Sbjct: 284 TS-KNIKI-IMATNRLDILDPALLRPGRIDRKI 314
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 145 (56.1 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 55/155 (35%), Positives = 79/155 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y++IG RG L+YGPPG GK+ L A+A + VV S+ +YL
Sbjct: 185 ELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASF----IRVVGSEFVQKYLGEGP 240
Query: 265 --------LLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L + SI+ +++ID +I + ++Q G AD R Q L LLN +DG
Sbjct: 241 RMVRDVFRLAKENSPSIIFIDEID-AIATKRFDAQTG---AD--REVQRILLELLNQMDG 294
Query: 317 LLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ K+ + TN +D +DPALLR GR+DR I
Sbjct: 295 FDQST-NVKV-IMATNRQDTLDPALLRPGRLDRKI 327
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 145 (56.1 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 51/172 (29%), Positives = 85/172 (49%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D ++E V + +R ++ + +G +G L+YGPPGTGK+ L A A N
Sbjct: 186 LDKQIEELVEAIVLPMKRADKF-KDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFL 244
Query: 249 NLNLS-----VVTSDSSL---EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSY 300
L + + L + L +I+ ++++D +I + +S+K +
Sbjct: 245 KLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELD-AIGTKRFDSEKSGD----- 298
Query: 301 RGPQVTLAGLLNAIDGLLCCCGDEKITVFT-TNYKDRIDPALLRAGRMDRHI 351
R Q T+ LLN +DG D+++ V TN D +DPALLR+GR+DR I
Sbjct: 299 REVQRTMLELLNQLDGF---SSDDRVKVLAATNRVDVLDPALLRSGRLDRKI 347
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 151 (58.2 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 56/173 (32%), Positives = 87/173 (50%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE V ++ + E + +G +G LLYGPPGTGK+ L A+A++ +
Sbjct: 184 LDQQVKE-VKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 242
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + S + E ++ H P SI+ +++ID SI Q E + GD
Sbjct: 243 RVSGSELVQKYIGEGSRMVRELFVMAREHAP--SIIFMDEID-SIGSQRIEGEHGDSEV- 298
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
Q T+ LLN +DG + K+ + TN D +D ALLR GR+DR I
Sbjct: 299 -----QRTMMELLNQLDGFEST-QNIKV-IMCTNRIDILDEALLRPGRIDRKI 344
Score = 37 (18.1 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 8/14 (57%), Positives = 8/14 (57%)
Query: 465 AADMGNVGGYSVKA 478
A DM N G VKA
Sbjct: 377 ATDMNNCSGAEVKA 390
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 151 (58.2 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 56/173 (32%), Positives = 87/173 (50%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE V ++ + E + +G +G LLYGPPGTGK+ L A+A++ +
Sbjct: 184 LDQQVKE-VKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 242
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + S + E ++ H P SI+ +++ID SI Q E + GD
Sbjct: 243 RVSGSELVQKYIGEGSRMVRELFVMAREHAP--SIIFMDEID-SIGSQRIEGEHGDSEV- 298
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
Q T+ LLN +DG + K+ + TN D +D ALLR GR+DR I
Sbjct: 299 -----QRTMMELLNQLDGFEST-QNIKV-IMCTNRIDILDEALLRPGRIDRKI 344
Score = 37 (18.1 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 8/14 (57%), Positives = 8/14 (57%)
Query: 465 AADMGNVGGYSVKA 478
A DM N G VKA
Sbjct: 377 ATDMNNCSGAEVKA 390
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 147 (56.8 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 55/168 (32%), Positives = 79/168 (47%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN 251
+LKE V D R K++ R GKV K G LL GPPGTGK+ L A+A + +++
Sbjct: 186 ELKEIV----DYLRDPKKFQRIGGKVPK-GVLLVGPPGTGKTLLARAVAGEADVTFLSIS 240
Query: 252 LS------VVTSDSSLEYLLLHVPNR--SILVVEDIDCSIKLQNRESQKGDEPADSYRGP 303
S V + L SI+ ++++D + + G + +
Sbjct: 241 ASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRSRGAGLGGGHDEREQ---- 296
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
TL LL+ +DG DE I + TN D +DPALLR GR DRH+
Sbjct: 297 --TLNQLLSEMDGF--DSHDEVIVMAATNRPDVLDPALLRPGRFDRHV 340
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 145 (56.1 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 55/201 (27%), Positives = 94/201 (46%)
Query: 211 YRKIGKVWKRGYLLYGPPGTGKSSLIAAMA-----NYMNYDIYNLNLSVVTSDSSL---E 262
++ +G +G L+YGPPGTGK+ L A A ++ L + + L
Sbjct: 226 FKNLGIKPPKGALMYGPPGTGKTLLARACAAQSGATFLKLAAPQLVQMFIGDGAKLVRDA 285
Query: 263 YLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCG 322
+ L +I+ ++++D +I + +S K + R Q T+ LLN +DG
Sbjct: 286 FALAKEKAPTIIFIDELD-AIGTKRFDSDKSGD-----REVQRTMLELLNQLDGF---GS 336
Query: 323 DEKITVFT-TNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCHIE 381
D+++ V TN D +DPALLR+GR+DR I + ++ + L I+ L+C
Sbjct: 337 DDRVKVLAATNRVDTLDPALLRSGRLDRKIEFPLPS----EEARESVLKIHARKLHCDNN 392
Query: 382 KL-MEKVKVSPAEVAGELMKA 401
+ ++ S E G +KA
Sbjct: 393 SVNWRELARSTDEFNGAQLKA 413
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 53/183 (28%), Positives = 85/183 (46%)
Query: 179 DHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAA 238
D ++F + + K+ ++ + F + Y K+G RG +L GPPGTGK+ L A
Sbjct: 282 DIKISFKNVAGCDEAKQEIMEFVH-FLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKA 340
Query: 239 MANYMNYDIYNLNLS------VVTSDSSLEYLLLHVPNR--SILVVEDIDCSIKLQNRES 290
A N +++ S V S + L + SI+ +++ID K + +
Sbjct: 341 TAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGG 400
Query: 291 QKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRH 350
G A+ R + TL LL +DG D+ + + TN D +D AL+R GR DRH
Sbjct: 401 ALGG--ANDER--EATLNQLLVEMDGFTT--SDQVVVLAGTNRPDVLDNALMRPGRFDRH 454
Query: 351 INL 353
I +
Sbjct: 455 IQI 457
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 147 (56.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 52/186 (27%), Positives = 90/186 (48%)
Query: 177 NLDHPMTFGTLV-MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSL 235
NL P+++ + +D ++ E++ + ++ + G RG LL+GPPGTGK+ L
Sbjct: 237 NLPEPLSYAAVGGLDKEI-ESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTML 295
Query: 236 IAAMANYMNYDIYNLNLSVVTSD--SSLEYLLLHVPNR------SILVVEDIDCSIKLQN 287
+ +AN N + +N + S E L + N SI+ +++ID SI N
Sbjct: 296 LRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEID-SIA-PN 353
Query: 288 RESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRM 347
R + E +S +A LL +DG+ G + + + TN + +DPAL R GR
Sbjct: 354 RANDDSGE-VESR-----VVATLLTLMDGM-GAAG-KVVVIAATNRPNSVDPALRRPGRF 405
Query: 348 DRHINL 353
D+ + +
Sbjct: 406 DQEVEI 411
Score = 125 (49.1 bits), Expect = 0.00031, P = 0.00031
Identities = 46/151 (30%), Positives = 66/151 (43%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNL------NLSVVTSDSSLE 262
E + ++G +G LLYGPPG K+ A+A + + N V S+ ++
Sbjct: 540 ETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIR 599
Query: 263 YLLLHVPNR--SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCC 320
+ + SI+ ++ID + D S L LLN IDG+
Sbjct: 600 EIFRKARSAAPSIIFFDEID---------ALSPDRDGSSTSAANHVLTSLLNEIDGVEEL 650
Query: 321 CGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
G + V TN D ID ALLR GR+DRHI
Sbjct: 651 KG--VVIVAATNRPDEIDAALLRPGRLDRHI 679
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 147 (56.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 54/167 (32%), Positives = 76/167 (45%)
Query: 190 DGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYN 249
D LKE V L R E Y +G V RG LL+GPPG GK+ L A+A ++ I
Sbjct: 265 DATLKE-VCKML-IHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILK 322
Query: 250 LNLSVVTSDSS--LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTL 307
+ + V S S E L + ++ V + C + + ++ S + +
Sbjct: 323 VAATEVVSGVSGESEQKLRELFEQA---VSNAPCVLFIDEIDAITPKREVASKDMERRIV 379
Query: 308 AGLLNAIDGLLCCCGDEKITVF-TTNYKDRIDPALLRAGRMDRHINL 353
A LL +D L ++ V TN D +DPAL RAGR DR I L
Sbjct: 380 AQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICL 426
Score = 126 (49.4 bits), Expect = 0.00027, P = 0.00027
Identities = 48/166 (28%), Positives = 78/166 (46%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYN-- 249
D++E + + R E +R +G + G LL GPPG GK+ L A+AN + +
Sbjct: 582 DIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVK 641
Query: 250 ----LNLSVVTSDSSLEYLLLHVPNRSILVV--EDIDCSIKLQNRESQKGDEPADSYRGP 303
LN+ V S+ ++ + + + V+ +++D L R S + E S R
Sbjct: 642 GPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDA---LCPRRSDR--ETGASVR-- 694
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDR 349
+ LL +DGL + + TN D IDPA+LR GR+D+
Sbjct: 695 --VVNQLLTEMDGLEA--RQQVFIMAATNRPDIIDPAILRPGRLDK 736
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 147 (56.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 54/167 (32%), Positives = 76/167 (45%)
Query: 190 DGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYN 249
D LKE V L R E Y +G V RG LL+GPPG GK+ L A+A ++ I
Sbjct: 265 DATLKE-VCKML-IHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILK 322
Query: 250 LNLSVVTSDSS--LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTL 307
+ + V S S E L + ++ V + C + + ++ S + +
Sbjct: 323 VAATEVVSGVSGESEQKLRELFEQA---VSNAPCVLFIDEIDAITPKREVASKDMERRIV 379
Query: 308 AGLLNAIDGLLCCCGDEKITVF-TTNYKDRIDPALLRAGRMDRHINL 353
A LL +D L ++ V TN D +DPAL RAGR DR I L
Sbjct: 380 AQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICL 426
Score = 126 (49.4 bits), Expect = 0.00027, P = 0.00027
Identities = 48/166 (28%), Positives = 78/166 (46%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYN-- 249
D++E + + R E +R +G + G LL GPPG GK+ L A+AN + +
Sbjct: 587 DIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVK 646
Query: 250 ----LNLSVVTSDSSLEYLLLHVPNRSILVV--EDIDCSIKLQNRESQKGDEPADSYRGP 303
LN+ V S+ ++ + + + V+ +++D L R S + E S R
Sbjct: 647 GPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDA---LCPRRSDR--ETGASVR-- 699
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDR 349
+ LL +DGL + + TN D IDPA+LR GR+D+
Sbjct: 700 --VVNQLLTEMDGLEA--RQQVFIMAATNRPDIIDPAILRPGRLDK 741
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 146 (56.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 58/186 (31%), Positives = 81/186 (43%)
Query: 179 DHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAA 238
D P T V D L ++ F + Y+ +G +G LLYGPPGTGK+ L A
Sbjct: 156 DMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARA 215
Query: 239 MANYMNYDIYNLNLS------VVTSDSSLEYLLLHVPNRS--ILVVEDIDCSIKLQNRES 290
+A + ++ S V S + L S I+ V++ID +
Sbjct: 216 VAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGR------ 269
Query: 291 QKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEK--ITVFTTNYKDRIDPALLRAGRMD 348
Q+G + + TL LL +DG GD I + TN D +DPALLR GR D
Sbjct: 270 QRGAGLGGGHDEREQTLNQLLVEMDGF----GDRAGVILIAATNRPDILDPALLRPGRFD 325
Query: 349 RHINLS 354
R I +S
Sbjct: 326 RQIPVS 331
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 54/173 (31%), Positives = 86/173 (49%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G LL+GPPGTGK+ L A+A++
Sbjct: 164 LDKQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFI 222
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + + + E ++ H P SI+ +++ID SI E G D
Sbjct: 223 RVSGSELVQKFIGEGARMVRELFVMAREHAP--SIIFMDEID-SIGSSRVEGSSG---GD 276
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
S Q T+ LLN +DG + K+ + TN D +DPALLR GR+DR I
Sbjct: 277 SE--VQRTMLELLNQLDGFEAT-KNIKV-IMATNRIDILDPALLRPGRIDRKI 325
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 142 (55.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 46/156 (29%), Positives = 77/156 (49%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
K+ + +G +G L+YGPPGTGK+ + A+A L + + D +
Sbjct: 200 KDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLV 259
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLC 319
+ L +I+ ++++D +I + +S+K + R Q T+ LLN +DG
Sbjct: 260 RDAFALAKEKAPAIIFIDELD-AIGTKRFDSEKAGD-----REVQRTMLELLNQLDGFQP 313
Query: 320 CCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSY 355
D+ + TN D +DPALLR+GR+DR I L +
Sbjct: 314 --NDDIKVIAATNRIDVLDPALLRSGRLDRKIELPH 347
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 142 (55.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 46/156 (29%), Positives = 77/156 (49%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
K+ + +G +G L+YGPPGTGK+ + A+A L + + D +
Sbjct: 200 KDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLV 259
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLC 319
+ L +I+ ++++D +I + +S+K + R Q T+ LLN +DG
Sbjct: 260 RDAFALAKEKAPAIIFIDELD-AIGTKRFDSEKAGD-----REVQRTMLELLNQLDGFQP 313
Query: 320 CCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSY 355
D+ + TN D +DPALLR+GR+DR I L +
Sbjct: 314 --NDDIKVIAATNRIDVLDPALLRSGRLDRKIELPH 347
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 146 (56.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 63/222 (28%), Positives = 99/222 (44%)
Query: 137 ELVKKKYLVHVLEMAKMFKDRNRIVRFHTIRHDRWSSSGVNLDHP-MTFGTLV-MDGDLK 194
E KKK + K F D + + ++ + S G L HP + F + D LK
Sbjct: 212 ESEKKKTKGKRAKRKKEFPDVDEEIESILLK-GKVKSKGPELYHPSVKFEDVGGNDETLK 270
Query: 195 ETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSV 254
E + + R E Y +G V RG+LL+GPPG GK+ L A+A + + + +
Sbjct: 271 E--ICKMLIHVRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAIAGELELPMLKVAATE 328
Query: 255 VTSDSS--LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLN 312
+ S S E L + ++++L + C + + ++ S + +A LL
Sbjct: 329 MVSGVSGESEQKLRELFDQAVL---NAPCVLFIDEIDAITPKREVASKDMERRIVAQLLT 385
Query: 313 AIDGLLCCCGDEKITVF-TTNYKDRIDPALLRAGRMDRHINL 353
+D L ++ V TN D +DPAL RAGR DR I L
Sbjct: 386 CLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICL 427
Score = 124 (48.7 bits), Expect = 0.00045, P = 0.00045
Identities = 46/153 (30%), Positives = 73/153 (47%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYN------LNLSVVTSDS 259
R E ++ +G G LL GPPG GK+ L A+AN + + LN+ V S+
Sbjct: 602 RNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESER 661
Query: 260 SLEYLLLHVPNRSILVV--EDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGL 317
++ + N + V+ +++D L R S + E S R + LL +DGL
Sbjct: 662 AVRQVFQRARNSAPCVIFFDEVDA---LCPRRSDR--ESGASVR----VVNQLLTEMDGL 712
Query: 318 LCCCGDEKITVFT-TNYKDRIDPALLRAGRMDR 349
+++ + TN D IDPA+LR GR+D+
Sbjct: 713 E---NRQQVFIMAATNRPDIIDPAILRPGRLDK 742
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 141 (54.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 47/152 (30%), Positives = 73/152 (48%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + +G +G L+YGPPGTGK+ L A A L + + D +
Sbjct: 155 KEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV 214
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLC 319
+ L SI+ ++++D +I + +S+K + R Q T+ LLN +DG
Sbjct: 215 RDAFALAKEKAPSIIFIDELD-AIGTKRFDSEKAGD-----REVQRTMLELLNQLDGFQP 268
Query: 320 CCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ + TN D +DPALLR+GR+DR I
Sbjct: 269 --NTQVKVIAATNRVDILDPALLRSGRLDRKI 298
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 141 (54.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 47/152 (30%), Positives = 73/152 (48%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + +G +G L+YGPPGTGK+ L A A L + + D +
Sbjct: 159 KEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV 218
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLC 319
+ L SI+ ++++D +I + +S+K + R Q T+ LLN +DG
Sbjct: 219 RDAFALAKEKAPSIIFIDELD-AIGTKRFDSEKAGD-----REVQRTMLELLNQLDGFQP 272
Query: 320 CCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ + TN D +DPALLR+GR+DR I
Sbjct: 273 --NTQVKVIAATNRVDILDPALLRSGRLDRKI 302
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 47/152 (30%), Positives = 73/152 (48%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + +G +G L+YGPPGTGK+ L A A L + + D +
Sbjct: 167 KEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV 226
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLC 319
+ L SI+ ++++D +I + +S+K + R Q T+ LLN +DG
Sbjct: 227 RDAFALAKEKAPSIIFIDELD-AIGTKRFDSEKAGD-----REVQRTMLELLNQLDGFQP 280
Query: 320 CCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ + TN D +DPALLR+GR+DR I
Sbjct: 281 --NTQVKVIAATNRVDILDPALLRSGRLDRKI 310
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 51/153 (33%), Positives = 76/153 (49%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLS-----VVTSDSSL-- 261
E + +G +G LLYGPPGTGK+ L A+A++ ++ S + S +
Sbjct: 167 ELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVR 226
Query: 262 EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
E ++ H P SI+ +++ID SI E+ GD Q T+ LLN +DG
Sbjct: 227 ELFVMAREHAP--SIIFMDEID-SIGSARLETGTGDSEV------QRTMLELLNQLDGFE 277
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ K+ + TN D +D ALLR GR+DR I
Sbjct: 278 AT-KNIKV-IMATNRIDVLDQALLRPGRIDRKI 308
>UNIPROTKB|G4MMM3 [details] [associations]
symbol:MGG_16395 "ATP-dependent Zn protease" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524
GO:GO:0006508 GO:GO:0008233 EMBL:CM001231 RefSeq:XP_003710407.1
ProteinModelPortal:G4MMM3 EnsemblFungi:MGG_16395T0 GeneID:12986318
KEGG:mgr:MGG_16395 Uniprot:G4MMM3
Length = 477
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 70/259 (27%), Positives = 111/259 (42%)
Query: 171 WSSSG--VNLDHPMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPP 228
W+ S N ++ +++D +K+ +++D F + + Y K+ WKRG + YGPP
Sbjct: 177 WNKSRELFNSIRKASWDNVILDPSMKQALIDDHMSFFKSRGQYEKLKVPWKRGIIYYGPP 236
Query: 229 GTGKSSLIAAMAN--YMNYD-IYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKL 285
G GK+ I A N Y D + L + + S E L + + + + C +
Sbjct: 237 GNGKTVSIKATMNMLYKLKDPVPTLYVRSLVSWMGPEAALSMIFSGARAMAP---CYLVF 293
Query: 286 QNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALL-RA 344
++ +S D SY LN +DGL D + +TN+ +R+DP + R
Sbjct: 294 EDLDSIVNDS-VRSY---------FLNEVDGLKN--NDGIFMIGSTNHLERLDPGISKRP 341
Query: 345 GRMDRHI---------NLSYCTFSTFKQLAANYLDINDHDLYCH-IEKLMEKVK---VSP 391
R DR ++YC F K LA N DI D C + +K +
Sbjct: 342 SRFDRKYLFPNPSRDQRVAYCHFWQGK-LADNK-DIEFPDSLCGAVADKTDKFSFAYIQE 399
Query: 392 AEVAGELMKAKGSKTSLED 410
A VA L A+ SK + ED
Sbjct: 400 AFVASLLAIARASKQADED 418
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 145 (56.1 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 61/216 (28%), Positives = 92/216 (42%)
Query: 190 DGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYN 249
D LKE V L R E Y+ +G V RG LL+GPPG GK+ L A+A ++ I
Sbjct: 270 DATLKE-VCKML-IHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILK 327
Query: 250 LNLSVVTSDSS--LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTL 307
+ + S S E L + +++ V + C + + ++ S + +
Sbjct: 328 VAAPEIVSGVSGESEQKLRELFDQA---VSNAPCIVFIDEIDAITPKREVASKDMERRIV 384
Query: 308 AGLLNAIDGLLCCCGDEKITVF-TTNYKDRIDPALLRAGRMDRHINLSY---CTFSTFKQ 363
A LL +D L ++ V TN D +DPAL RAGR DR + L Q
Sbjct: 385 AQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQ 444
Query: 364 LAANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELM 399
L + + +CH+ L +P V +LM
Sbjct: 445 TLCRKLRLPETFNFCHLAHL------TPGFVGADLM 474
Score = 124 (48.7 bits), Expect = 0.00045, P = 0.00045
Identities = 47/166 (28%), Positives = 78/166 (46%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYN-- 249
D+++ ++ + R + +R +G G LL GPPG GK+ L A+AN + +
Sbjct: 587 DIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVK 646
Query: 250 ----LNLSVVTSDSSLEYLLLHVPNRSILVV--EDIDCSIKLQNRESQKGDEPADSYRGP 303
LN+ V S+ ++ + N + V+ +++D L R S + E S R
Sbjct: 647 GPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDA---LCPRRSDR--ETGASVR-- 699
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDR 349
+ LL +DGL + + TN D IDPA+LR GR+D+
Sbjct: 700 --VVNQLLTEMDGLET--RQQVFILAATNRPDIIDPAILRPGRLDK 741
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 141 (54.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 47/152 (30%), Positives = 73/152 (48%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + +G +G L+YGPPGTGK+ L A A L + + D +
Sbjct: 209 KEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV 268
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLC 319
+ L SI+ ++++D +I + +S+K + R Q T+ LLN +DG
Sbjct: 269 RDAFALAKEKAPSIIFIDELD-AIGTKRFDSEKAGD-----REVQRTMLELLNQLDGFQP 322
Query: 320 CCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ + TN D +DPALLR+GR+DR I
Sbjct: 323 --NTQVKVIAATNRVDILDPALLRSGRLDRKI 352
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 141 (54.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 47/152 (30%), Positives = 73/152 (48%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + +G +G L+YGPPGTGK+ L A A L + + D +
Sbjct: 209 KEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV 268
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLC 319
+ L SI+ ++++D +I + +S+K + R Q T+ LLN +DG
Sbjct: 269 RDAFALAKEKAPSIIFIDELD-AIGTKRFDSEKAGD-----REVQRTMLELLNQLDGFQP 322
Query: 320 CCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ + TN D +DPALLR+GR+DR I
Sbjct: 323 --NTQVKVIAATNRVDILDPALLRSGRLDRKI 352
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 141 (54.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 47/152 (30%), Positives = 73/152 (48%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + +G +G L+YGPPGTGK+ L A A L + + D +
Sbjct: 209 KEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV 268
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLC 319
+ L SI+ ++++D +I + +S+K + R Q T+ LLN +DG
Sbjct: 269 RDAFALAKEKAPSIIFIDELD-AIGTKRFDSEKAGD-----REVQRTMLELLNQLDGFQP 322
Query: 320 CCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ + TN D +DPALLR+GR+DR I
Sbjct: 323 --NTQVKVIAATNRVDILDPALLRSGRLDRKI 352
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 141 (54.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 47/152 (30%), Positives = 73/152 (48%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + +G +G L+YGPPGTGK+ L A A L + + D +
Sbjct: 212 KEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV 271
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLC 319
+ L SI+ ++++D +I + +S+K + R Q T+ LLN +DG
Sbjct: 272 RDAFALAKEKAPSIIFIDELD-AIGTKRFDSEKAGD-----REVQRTMLELLNQLDGFQP 325
Query: 320 CCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ + TN D +DPALLR+GR+DR I
Sbjct: 326 --NTQVKVIAATNRVDILDPALLRSGRLDRKI 355
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 141 (54.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 47/152 (30%), Positives = 73/152 (48%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + +G +G L+YGPPGTGK+ L A A L + + D +
Sbjct: 212 KEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV 271
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLC 319
+ L SI+ ++++D +I + +S+K + R Q T+ LLN +DG
Sbjct: 272 RDAFALAKEKAPSIIFIDELD-AIGTKRFDSEKAGD-----REVQRTMLELLNQLDGFQP 325
Query: 320 CCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ + TN D +DPALLR+GR+DR I
Sbjct: 326 --NTQVKVIAATNRVDILDPALLRSGRLDRKI 355
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 47/152 (30%), Positives = 73/152 (48%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + +G +G L+YGPPGTGK+ L A A L + + D +
Sbjct: 216 KEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV 275
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLC 319
+ L SI+ ++++D +I + +S+K + R Q T+ LLN +DG
Sbjct: 276 RDAFALAKEKAPSIIFIDELD-AIGTKRFDSEKAGD-----REVQRTMLELLNQLDGFQP 329
Query: 320 CCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ + TN D +DPALLR+GR+DR I
Sbjct: 330 --NTQVKVIAATNRVDILDPALLRSGRLDRKI 359
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 48/167 (28%), Positives = 79/167 (47%)
Query: 211 YRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVV--TSDSSLEYL 264
+ K+G RG LL GPPG GK+ L A+A ++N + V+ S + L
Sbjct: 310 FTKLGAKLPRGALLTGPPGCGKTLLAKALAAESTVPFISMNGSEFVEVIGGLGASRIRGL 369
Query: 265 LLHVPNRS--ILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCG 322
+R+ I+ +++ID + ++ + G + TL LL +DG+ G
Sbjct: 370 FKEARSRAPCIIYIDEIDAIGRKRSEGAGAGGGFGGGSGEEEQTLNQLLVEMDGM--GSG 427
Query: 323 DEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYL 369
+ + + +TN D +D ALLR GR DRHI++ T K + Y+
Sbjct: 428 NGVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERKDMFELYM 474
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 47/152 (30%), Positives = 73/152 (48%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + +G +G L+YGPPGTGK+ L A A L + + D +
Sbjct: 226 KEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV 285
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLC 319
+ L SI+ ++++D +I + +S+K + R Q T+ LLN +DG
Sbjct: 286 RDAFALAKEKAPSIIFIDELD-AIGTKRFDSEKAGD-----REVQRTMLELLNQLDGFQP 339
Query: 320 CCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ + TN D +DPALLR+GR+DR I
Sbjct: 340 --NTQVKVIAATNRVDILDPALLRSGRLDRKI 369
>TAIR|locus:2085350 [details] [associations]
symbol:AT3G58330 "AT3G58330" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 EMBL:AL137081 InterPro:IPR007942
Pfam:PF05278 EMBL:DQ446776 IPI:IPI00541618 PIR:T45993
RefSeq:NP_191392.1 UniGene:At.65290 EnsemblPlants:AT3G58330.1
GeneID:825002 KEGG:ath:AT3G58330 TAIR:At3g58330 OMA:KNAYMDV
PhylomeDB:Q9M2I3 ProtClustDB:CLSN2684716 ArrayExpress:Q9M2I3
Genevestigator:Q9M2I3 Uniprot:Q9M2I3
Length = 173
Score = 124 (48.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 33/118 (27%), Positives = 57/118 (48%)
Query: 443 QENGNNISKSGVQDQS-SHTETEAADMGNVGGYSVKAEFANIIKAIFSKHGDIAANSCLQ 501
+EN + S D S S +E + V G+ V N++ + KH D+ +N L+
Sbjct: 3 KENSCEANDSDDGDFSPSQDSSEDEETVEVNGFHVLPSQENLVSQMLKKHPDLTSNFDLK 62
Query: 502 SKQCRSSLLEIVCRIIXXXXXXXXXXXXETELKSMLSELQDLESMRLEVGWLRKRLDE 559
++Q +++ ++++ I E +L S L DL L+VGWLR++LDE
Sbjct: 63 NQQLKNAYMDVLVDISETLSQSTKALSME-DLDKAESTLFDLTKAGLKVGWLRQKLDE 119
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 48/152 (31%), Positives = 74/152 (48%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + +G +G L+YGPPGTGK+ L A A L + + D +
Sbjct: 193 KEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV 252
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLC 319
+ L SI+ ++++D +I + +S+K + R Q T+ LLN +DG
Sbjct: 253 RDAFALAKEKAPSIIFIDELD-AIGTKRFDSEKAGD-----REVQRTMLELLNQLDGFQP 306
Query: 320 CCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
K+ + TN D +DPALLR+GR+DR I
Sbjct: 307 NM-QVKV-IAATNRVDILDPALLRSGRLDRKI 336
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 54/173 (31%), Positives = 86/173 (49%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G LLYGPPGTGK+ L A+A++ +
Sbjct: 154 LDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 212
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + + + E ++ H P SI+ +++ID SI E G D
Sbjct: 213 RVSGSELVQKFIGEGARMVRELFVMAREHAP--SIIFMDEID-SIGSSRLEGGSG---GD 266
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
S Q T+ LLN +DG + K+ + TN D +D ALLR GR+DR I
Sbjct: 267 SE--VQRTMLELLNQLDGFEAT-KNIKV-IMATNRIDILDSALLRPGRIDRKI 315
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 54/173 (31%), Positives = 86/173 (49%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G LLYGPPGTGK+ L A+A++ +
Sbjct: 154 LDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 212
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + + + E ++ H P SI+ +++ID SI E G D
Sbjct: 213 RVSGSELVQKFIGEGARMVRELFVMAREHAP--SIIFMDEID-SIGSSRLEGGSG---GD 266
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
S Q T+ LLN +DG + K+ + TN D +D ALLR GR+DR I
Sbjct: 267 SE--VQRTMLELLNQLDGFEAT-KNIKV-IMATNRIDILDSALLRPGRIDRKI 315
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 54/173 (31%), Positives = 86/173 (49%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G LLYGPPGTGK+ L A+A++ +
Sbjct: 154 LDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 212
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + + + E ++ H P SI+ +++ID SI E G D
Sbjct: 213 RVSGSELVQKFIGEGARMVRELFVMAREHAP--SIIFMDEID-SIGSSRLEGGSG---GD 266
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
S Q T+ LLN +DG + K+ + TN D +D ALLR GR+DR I
Sbjct: 267 SE--VQRTMLELLNQLDGFEAT-KNIKV-IMATNRIDILDSALLRPGRIDRKI 315
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 54/173 (31%), Positives = 86/173 (49%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G LLYGPPGTGK+ L A+A++ +
Sbjct: 154 LDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 212
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + + + E ++ H P SI+ +++ID SI E G D
Sbjct: 213 RVSGSELVQKFIGEGARMVRELFVMAREHAP--SIIFMDEID-SIGSSRLEGGSG---GD 266
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
S Q T+ LLN +DG + K+ + TN D +D ALLR GR+DR I
Sbjct: 267 SE--VQRTMLELLNQLDGFEAT-KNIKV-IMATNRIDILDSALLRPGRIDRKI 315
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 54/173 (31%), Positives = 86/173 (49%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G LLYGPPGTGK+ L A+A++ +
Sbjct: 154 LDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 212
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + + + E ++ H P SI+ +++ID SI E G D
Sbjct: 213 RVSGSELVQKFIGEGARMVRELFVMAREHAP--SIIFMDEID-SIGSSRLEGGSG---GD 266
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
S Q T+ LLN +DG + K+ + TN D +D ALLR GR+DR I
Sbjct: 267 SE--VQRTMLELLNQLDGFEAT-KNIKV-IMATNRIDILDSALLRPGRIDRKI 315
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 54/173 (31%), Positives = 86/173 (49%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G LLYGPPGTGK+ L A+A++ +
Sbjct: 154 LDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 212
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + + + E ++ H P SI+ +++ID SI E G D
Sbjct: 213 RVSGSELVQKFIGEGARMVRELFVMAREHAP--SIIFMDEID-SIGSSRLEGGSG---GD 266
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
S Q T+ LLN +DG + K+ + TN D +D ALLR GR+DR I
Sbjct: 267 SE--VQRTMLELLNQLDGFEAT-KNIKV-IMATNRIDILDSALLRPGRIDRKI 315
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 54/173 (31%), Positives = 86/173 (49%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G LLYGPPGTGK+ L A+A++ +
Sbjct: 154 LDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 212
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + + + E ++ H P SI+ +++ID SI E G D
Sbjct: 213 RVSGSELVQKFIGEGARMVRELFVMAREHAP--SIIFMDEID-SIGSSRLEGGSG---GD 266
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
S Q T+ LLN +DG + K+ + TN D +D ALLR GR+DR I
Sbjct: 267 SE--VQRTMLELLNQLDGFEAT-KNIKV-IMATNRIDILDSALLRPGRIDRKI 315
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 140 (54.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 54/173 (31%), Positives = 86/173 (49%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G LLYGPPGTGK+ L A+A++ +
Sbjct: 160 LDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 218
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + + + E ++ H P SI+ +++ID SI E G D
Sbjct: 219 RVSGSELVQKFIGEGARMVRELFVMAREHAP--SIIFMDEID-SIGSSRLEGGSG---GD 272
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
S Q T+ LLN +DG + K+ + TN D +D ALLR GR+DR I
Sbjct: 273 SE--VQRTMLELLNQLDGFEAT-KNIKV-IMATNRIDILDSALLRPGRIDRKI 321
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 140 (54.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 54/173 (31%), Positives = 86/173 (49%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G LLYGPPGTGK+ L A+A++ +
Sbjct: 162 LDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 220
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + + + E ++ H P SI+ +++ID SI E G D
Sbjct: 221 RVSGSELVQKFIGEGARMVRELFVMAREHAP--SIIFMDEID-SIGSSRLEGGSG---GD 274
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
S Q T+ LLN +DG + K+ + TN D +D ALLR GR+DR I
Sbjct: 275 SE--VQRTMLELLNQLDGFEAT-KNIKV-IMATNRIDILDSALLRPGRIDRKI 323
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 140 (54.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 54/173 (31%), Positives = 86/173 (49%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G LLYGPPGTGK+ L A+A++ +
Sbjct: 162 LDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 220
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + + + E ++ H P SI+ +++ID SI E G D
Sbjct: 221 RVSGSELVQKFIGEGARMVRELFVMAREHAP--SIIFMDEID-SIGSSRLEGGSG---GD 274
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
S Q T+ LLN +DG + K+ + TN D +D ALLR GR+DR I
Sbjct: 275 SE--VQRTMLELLNQLDGFEAT-KNIKV-IMATNRIDILDSALLRPGRIDRKI 323
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 140 (54.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 55/158 (34%), Positives = 79/158 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSSLEYL---- 264
E Y++IG RG L+YGPPG GK+ L A+A++ + VV S+ +YL
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAF----IRVVGSEFVQKYLGEGP 244
Query: 265 -------LLHVPNR-SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDG 316
L N +I+ +++ID +I + ++Q G AD R Q L LLN +DG
Sbjct: 245 RMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQTG---AD--REVQRILLELLNQMDG 298
Query: 317 LLCCCGDEKITV---FTTNYKDRIDPALLRAGRMDRHI 351
D+ + V TN D +DPALL GR+DR I
Sbjct: 299 F-----DQNVNVKVIMATNRADTLDPALLCPGRLDRKI 331
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 144 (55.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 52/186 (27%), Positives = 88/186 (47%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN 251
+ K+ V +D + + E Y+++G RG LL GPPG GK+ L A+A ++N
Sbjct: 348 EAKQEVKEFVD-YLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFLSMN 406
Query: 252 ----LSVV--TSDSSLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKGDEPADSYRGP 303
+ ++ + + L R+ I+ +++ID + ++ G S
Sbjct: 407 GSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTESMGQ--GSSGESE 464
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQ 363
Q TL LL +DG+ G + + +TN D +D ALLR GR DRHI + T + K+
Sbjct: 465 Q-TLNQLLVEMDGMATKEG--VLMLASTNRADILDKALLRPGRFDRHILIDLPTLAERKE 521
Query: 364 LAANYL 369
+ +L
Sbjct: 522 IFEKHL 527
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 140 (54.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 48/152 (31%), Positives = 74/152 (48%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + +G +G L+YGPPGTGK+ L A A L + + D +
Sbjct: 197 KEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV 256
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLC 319
+ L SI+ ++++D +I + +S+K + R Q T+ LLN +DG
Sbjct: 257 RDAFALAKEKAPSIIFIDELD-AIGTKRFDSEKAGD-----REVQRTMLELLNQLDGFQP 310
Query: 320 CCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
K+ + TN D +DPALLR+GR+DR I
Sbjct: 311 NM-QVKV-IAATNRVDILDPALLRSGRLDRKI 340
>TIGR_CMR|DET_1513 [details] [associations]
symbol:DET_1513 "ATPase, AAA family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0019538 "protein metabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0465 GO:GO:0017111 RefSeq:YP_182211.1
ProteinModelPortal:Q3Z6D8 STRING:Q3Z6D8 GeneID:3229236
KEGG:det:DET1513 PATRIC:21610046 HOGENOM:HOG000133135 OMA:REGMNSP
ProtClustDB:CLSK741621 BioCyc:DETH243164:GJNF-1514-MONOMER
Uniprot:Q3Z6D8
Length = 431
Score = 140 (54.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 54/179 (30%), Positives = 93/179 (51%)
Query: 183 TFGTLVMDGDLKETV-LNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMAN 241
++ +++++ +K+ + LN + F + ++ ++G KRG LL G PGTGK+ + A+ +
Sbjct: 172 SWDSIILEESVKDDIYLNSVQ-FLKQQDRLSRLGISKKRGLLLAGEPGTGKTIVCKALMS 230
Query: 242 ------YMNYDIYNLNLSVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDE 295
+ D Y L + + Y + + SI+ +ED+D K +R+ + G+E
Sbjct: 231 GAKDITCITTDCYQLREAWYVDEL---YEIARELSPSIVFIEDLDLIGK--SRD-EYGNE 284
Query: 296 PADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRA-GRMDRHINL 353
A P L+ LL A+DGL G +T+ TTN+ D +D AL+R R DR I L
Sbjct: 285 AAT----P---LSALLAALDGLETNLG--VVTIATTNFLDSLDNALIRRPSRFDRVITL 334
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 140 (54.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 54/173 (31%), Positives = 86/173 (49%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E + +G +G LLYGPPGTGK+ L A+A++
Sbjct: 180 LDTQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFI 238
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + + + E ++ H P SI+ +++ID SI E +G D
Sbjct: 239 RVSGSELVQKFIGEGARMVRELFVMAREHAP--SIIFMDEID-SIGSSRVEGSRG---GD 292
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
S Q T+ LLN +DG + K+ + TN D +D ALLR GR+DR I
Sbjct: 293 SE--VQRTMLELLNQLDGFEAT-KNIKV-IMATNRIDILDSALLRPGRIDRKI 341
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 144 (55.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 62/213 (29%), Positives = 95/213 (44%)
Query: 148 LEMAKMF-KDRNRIVRFHTIRHDRWSSSGVNLDHPMTFGTLVMDGDLKETVLNDLDCFRR 206
L+MA F K R+ R R + GV++ G + +L+E V F
Sbjct: 376 LQMAMQFMKSGARVRRASNKRLPEYLERGVDVKFTDVAGLGKIRLELEEIV----KFFTH 431
Query: 207 GKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLS------VVTSDSS 260
G E YR+ G G LL GPPG GK+ L A+A + ++++ S V S
Sbjct: 432 G-EMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASR 490
Query: 261 LEYLLLHVPNR--SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLL 318
+ L S++ ++++D + + G + D+ TL LL ++DG
Sbjct: 491 VRALYQEARENAPSVVFIDELDAVGRERGLIKGSGGQERDA------TLNQLLVSLDGFE 544
Query: 319 CCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
E IT+ +TN D +DPAL+R GR DR I
Sbjct: 545 G--RGEVITIASTNRPDILDPALVRPGRFDRKI 575
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 144 (55.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 61/236 (25%), Positives = 101/236 (42%)
Query: 181 PMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMA 240
P+ F + + K +L +D F + +E Y ++G +G LL GPPG+GK+ L A+A
Sbjct: 145 PIRFEEIAGIDESKLELLEVVD-FIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVA 203
Query: 241 NYMNYD-IYN-----LNLSVVTSDSSLEYLLLHVPN--RSILVVEDIDCSIKLQNRESQK 292
N IY + + V + L H + SI+ +++ID + + S
Sbjct: 204 TEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDA---IGGKRSS- 259
Query: 293 GDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHIN 352
G R TL LL +DG + + TN D +D ALLR GR DR +
Sbjct: 260 GSVNGAGQREHDQTLNQLLVEMDGFSNTV--HIMVIGATNRIDTLDSALLRPGRFDRIVY 317
Query: 353 LSYCTFSTFKQLAANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELMKAKGSKTSL 408
+ + K++ Y+ DL +E + + +++P +L T L
Sbjct: 318 VPLPDINGRKKILEIYIKKIKSDL--KLEDIEKIARLTPGFSGADLENVVNEATIL 371
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 144 (55.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 61/236 (25%), Positives = 101/236 (42%)
Query: 181 PMTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMA 240
P+ F + + K +L +D F + +E Y ++G +G LL GPPG+GK+ L A+A
Sbjct: 145 PIRFEEIAGIDESKLELLEVVD-FIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVA 203
Query: 241 NYMNYD-IYN-----LNLSVVTSDSSLEYLLLHVPN--RSILVVEDIDCSIKLQNRESQK 292
N IY + + V + L H + SI+ +++ID + + S
Sbjct: 204 TEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDA---IGGKRSS- 259
Query: 293 GDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHIN 352
G R TL LL +DG + + TN D +D ALLR GR DR +
Sbjct: 260 GSVNGAGQREHDQTLNQLLVEMDGFSNTV--HIMVIGATNRIDTLDSALLRPGRFDRIVY 317
Query: 353 LSYCTFSTFKQLAANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELMKAKGSKTSL 408
+ + K++ Y+ DL +E + + +++P +L T L
Sbjct: 318 VPLPDINGRKKILEIYIKKIKSDL--KLEDIEKIARLTPGFSGADLENVVNEATIL 371
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 140 (54.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 52/173 (30%), Positives = 86/173 (49%)
Query: 189 MDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIY 248
+D +KE + ++ + E++ +G +G LLYGPPGTGK+ L A+A++ +
Sbjct: 149 LDKQIKE-IKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 207
Query: 249 NLNLS-----VVTSDSSL--EYLLL---HVPNRSILVVEDIDCSIKLQNRESQKGDEPAD 298
++ S + + + E ++ H P SI+ +++ID SI + GD
Sbjct: 208 RVSGSELVQKFIGEGARMVRELFVMAREHAP--SIIFMDEID-SIGSRLEGGSGGDSEV- 263
Query: 299 SYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
Q T+ LLN +DG + K+ + TN D +D ALLR GR+DR I
Sbjct: 264 -----QRTMLELLNQLDGFEAT-KNIKV-IMATNRIDILDSALLRPGRIDRKI 309
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 139 (54.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 48/152 (31%), Positives = 74/152 (48%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + +G +G L+YGPPGTGK+ L A A L + + D +
Sbjct: 174 KEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV 233
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLC 319
+ L SI+ ++++D +I + +S+K + R Q T+ LLN +DG
Sbjct: 234 RDAFSLAKEKAPSIIFIDELD-AIGNKRFDSEKAGD-----REVQRTMLELLNQLDGFQP 287
Query: 320 CCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
K+ + TN D +DPALLR+GR+DR I
Sbjct: 288 TT-QVKV-IAATNRVDILDPALLRSGRLDRKI 317
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 141 (54.7 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 48/151 (31%), Positives = 69/151 (45%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSS--LEY 263
R E Y +G V RG LL+GPPG GK+ L A+A ++ I + + S S E
Sbjct: 179 RHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQ 238
Query: 264 LLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGD 323
L + ++ V + C I + ++ S + +A LL +D L
Sbjct: 239 KLRELFEQA---VSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAAT 295
Query: 324 EKITVF-TTNYKDRIDPALLRAGRMDRHINL 353
++ V TN D +DPAL RAGR DR I L
Sbjct: 296 ARVLVIGATNRPDSLDPALRRAGRFDREICL 326
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 141 (54.7 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 52/186 (27%), Positives = 86/186 (46%)
Query: 177 NLDHP-MTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSL 235
N+D P +TF + + K+ V ++ F + +E ++ +G +G LL GPPGTGK+ L
Sbjct: 150 NMDKPTITFANVAGVDEAKQEVGEVVE-FLKSREKFQALGARIPKGILLIGPPGTGKTLL 208
Query: 236 IAAMANYMNYDIYNLNLS------VVTSDSSLEYLLLHVPNRS--ILVVEDIDCSIKLQN 287
A+A ++++ S V S + L + I+ +++ID +
Sbjct: 209 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGR--- 265
Query: 288 RESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRM 347
Q+G + + TL +L +DG I + TN D +DPALLR GR
Sbjct: 266 ---QRGAGLGGGHDEREQTLNQILVEMDGF--DTDTSVIVIAATNRPDILDPALLRPGRF 320
Query: 348 DRHINL 353
DR + L
Sbjct: 321 DRRVVL 326
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 142 (55.0 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 52/170 (30%), Positives = 79/170 (46%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN 251
+ KE ++ + F + Y K+G RG +L GPPGTGK+ L A A Y ++
Sbjct: 355 EAKEEIMEFVS-FLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVS 413
Query: 252 LS------VVTSDSSLEYLLLHVPNR--SILVVEDIDCSIKLQNRESQKGDEPADSYRGP 303
S V + + L SI+ +++ID K + + + G A+ R
Sbjct: 414 GSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSG---ANDER-- 468
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
+ TL +L +DG D + + TN D +D ALLR GR DRHIN+
Sbjct: 469 ENTLNQMLVEMDGFTPA--DHVVVLAGTNRPDILDKALLRPGRFDRHINI 516
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 141 (54.7 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 48/151 (31%), Positives = 69/151 (45%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSS--LEY 263
R E Y +G V RG LL+GPPG GK+ L A+A ++ I + + S S E
Sbjct: 168 RHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQ 227
Query: 264 LLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGD 323
L + ++ V + C I + ++ S + +A LL +D L
Sbjct: 228 KLRELFEQA---VSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAAT 284
Query: 324 EKITVF-TTNYKDRIDPALLRAGRMDRHINL 353
++ V TN D +DPAL RAGR DR I L
Sbjct: 285 ARVLVIGATNRPDSLDPALRRAGRFDREICL 315
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 48/166 (28%), Positives = 78/166 (46%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYN-- 249
D++E + + R + ++ +G V G LL GPPG GK+ L A+AN + +
Sbjct: 471 DIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVK 530
Query: 250 ----LNLSVVTSDSSLEYLLLHVPNRSILVV--EDIDCSIKLQNRESQKGDEPADSYRGP 303
LN+ V S+ ++ + N + V+ +++D L R S + E S R
Sbjct: 531 GPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDA---LCPRRSDR--ETGASVR-- 583
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDR 349
+ LL +DGL + + TN D IDPA+LR GR+D+
Sbjct: 584 --VVNQLLTEMDGLEA--RQQVFIMAATNRPDIIDPAILRPGRLDK 625
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 141 (54.7 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 51/157 (32%), Positives = 78/157 (49%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSS- 260
R E Y+++G V RG+LL+GPPG GK+ L A+A + ++ +S V+ +S
Sbjct: 247 RHPEVYQRLGVVPPRGFLLHGPPGCGKTLLAQAVAGETALPLLKISAPELVSGVSGESEQ 306
Query: 261 -LEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGL 317
L L + + IL +++ID +I + + K E + +A LL +D L
Sbjct: 307 KLRELFEQAISSAPCILFIDEID-AITPKRETASKDME--------RRIVAQLLTCMDDL 357
Query: 318 LCCCGDEKITVF-TTNYKDRIDPALLRAGRMDRHINL 353
++ V TN D +DPAL RAGR DR I L
Sbjct: 358 NSMLEPAQVLVIGATNRPDSLDPALRRAGRFDREICL 394
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 141 (54.7 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 52/167 (31%), Positives = 77/167 (46%)
Query: 190 DGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYN 249
D LKE V L R E Y+ +G V RG LL+GPPG GK+ L A+A ++ I
Sbjct: 270 DATLKE-VCKML-IHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILK 327
Query: 250 LNLSVVTSDSS--LEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTL 307
+ + S S E L + +++ V + C + + ++ S + +
Sbjct: 328 VAAPEIVSGVSGESEQKLRDLFDQA---VSNAPCIVFIDEIDAITPKREVASKDMERRIV 384
Query: 308 AGLLNAIDGLLCCCGDEKITVF-TTNYKDRIDPALLRAGRMDRHINL 353
A LL +D L ++ V TN D +DPAL RAGR DR + L
Sbjct: 385 AQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVCL 431
Score = 133 (51.9 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 50/166 (30%), Positives = 78/166 (46%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYN-- 249
D++E + + R E +R +G V G LL GPPG GK+ L A+AN + +
Sbjct: 587 DIREELTMAILAPVRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVK 646
Query: 250 ----LNLSVVTSDSSLEYLLLHVPNRSILVV--EDIDCSIKLQNRESQKGDEPADSYRGP 303
LN+ V S+ ++ + N + V+ +++D L R S + E S R
Sbjct: 647 GPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDA---LCPRRSDR--ETGASVR-- 699
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDR 349
+ LL +DGL + + TN D IDPA+LR GR+D+
Sbjct: 700 --VVNQLLTEMDGLET--RQQVFILAATNRPDIIDPAILRPGRLDK 741
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 141 (54.7 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 48/151 (31%), Positives = 69/151 (45%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSS--LEY 263
R E Y +G V RG LL+GPPG GK+ L A+A ++ I + + S S E
Sbjct: 285 RHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQ 344
Query: 264 LLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGD 323
L + ++ V + C I + ++ S + +A LL +D L
Sbjct: 345 KLRELFEQA---VSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAAT 401
Query: 324 EKITVF-TTNYKDRIDPALLRAGRMDRHINL 353
++ V TN D +DPAL RAGR DR I L
Sbjct: 402 ARVLVIGATNRPDSLDPALRRAGRFDREICL 432
Score = 129 (50.5 bits), Expect = 0.00013, P = 0.00013
Identities = 48/166 (28%), Positives = 78/166 (46%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYN-- 249
D++E + + R + ++ +G V G LL GPPG GK+ L A+AN + +
Sbjct: 588 DIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVK 647
Query: 250 ----LNLSVVTSDSSLEYLLLHVPNRSILVV--EDIDCSIKLQNRESQKGDEPADSYRGP 303
LN+ V S+ ++ + N + V+ +++D L R S + E S R
Sbjct: 648 GPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDA---LCPRRSDR--ETGASVR-- 700
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDR 349
+ LL +DGL + + TN D IDPA+LR GR+D+
Sbjct: 701 --VVNQLLTEMDGLEA--RQQVFIMAATNRPDIIDPAILRPGRLDK 742
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 139 (54.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 48/156 (30%), Positives = 76/156 (48%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVT--SDS 259
R + ++ IG RG LLYGPPGTGK+ + A+AN + +N +S + S+S
Sbjct: 243 RHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESES 302
Query: 260 SLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGL 317
+L S I+ +++ID SI RE G+ + ++ LL +DG+
Sbjct: 303 NLRKAFEEAEKNSPAIIFIDEID-SIA-PKREKTNGEVE-------RRVVSQLLTLMDGM 353
Query: 318 LCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
+ + TN + IDPAL R GR DR +++
Sbjct: 354 KA--RSNVVVMAATNRPNSIDPALRRFGRFDREVDI 387
Score = 121 (47.7 bits), Expect = 0.00090, P = 0.00090
Identities = 49/165 (29%), Positives = 75/165 (45%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN 251
DL+E V +D E + K G RG L YGPPGTGK+ L A+AN + ++
Sbjct: 507 DLREQVQYPVD----HPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVK 562
Query: 252 ----LSVV--TSDSSLEYLL--LHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGP 303
LS+ S+S++ + I+ ++++D K R GD S R
Sbjct: 563 GPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKA--RGGSVGDAGGASDR-- 618
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMD 348
+ LL +DG+ + TN +++DPAL R GR+D
Sbjct: 619 --VVNQLLTEMDGMTS--KKNVFVIGATNRPEQLDPALCRPGRLD 659
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/178 (28%), Positives = 82/178 (46%)
Query: 182 MTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMAN 241
+TF + ++KE + ++ F + Y ++G +G LL+G PGTGK+ L A+A
Sbjct: 155 VTFADVAGIDEVKEELAEIVE-FLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAG 213
Query: 242 YMNYDIYNLNLS------VVTSDSSLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKG 293
++++ S V S + L + I+ +++ID + Q+G
Sbjct: 214 EAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGR------QRG 267
Query: 294 DEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ + TL LL +DG + I + TN D +DPALLR GR DRHI
Sbjct: 268 AGLGGGHDEREQTLNQLLVEMDGFNS--NEGIIIIAATNRPDILDPALLRPGRFDRHI 323
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/178 (28%), Positives = 82/178 (46%)
Query: 182 MTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMAN 241
+TF + ++KE + ++ F + Y ++G +G LL+G PGTGK+ L A+A
Sbjct: 155 VTFADVAGIDEVKEELAEIVE-FLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAG 213
Query: 242 YMNYDIYNLNLS------VVTSDSSLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKG 293
++++ S V S + L + I+ +++ID + Q+G
Sbjct: 214 EAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGR------QRG 267
Query: 294 DEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ + TL LL +DG + I + TN D +DPALLR GR DRHI
Sbjct: 268 AGLGGGHDEREQTLNQLLVEMDGFNS--NEGIIIIAATNRPDILDPALLRPGRFDRHI 323
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 60/216 (27%), Positives = 91/216 (42%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANY--MNYDIYN 249
+LK ++ + + ++ +G +G LLYGPPG K+ A+A +N+
Sbjct: 506 ELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVK 565
Query: 250 ----LNLSVVTSDSSLEYLL--LHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYR-G 302
N V S+ ++ + + SI+ ++ID GD DS
Sbjct: 566 GPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDAIA---------GDRDGDSSTTA 616
Query: 303 PQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLS---YCTFS 359
L LLN IDG+ G + V TN IDPALLR GR+DRHI ++ Y
Sbjct: 617 ASNVLTSLLNEIDGVEELKG--VVIVGATNKPTEIDPALLRPGRLDRHIYVAPPDYDARL 674
Query: 360 TFKQLAANYLDINDHDLYCHIEKLMEKVK-VSPAEV 394
Q + ++ D ++KL E S AEV
Sbjct: 675 QILQKCSRKFNLQSGDESVDLQKLAELTDGCSGAEV 710
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 57/186 (30%), Positives = 82/186 (44%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSS--LEYLLL 266
E Y G RG LLYGPPG GK+++ A+A + N++ V S S E L
Sbjct: 217 EIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAPSVVSGMSGESEKKLR 276
Query: 267 HVPNRSILVVEDIDCSIKLQNRES--QKGDEPADSYRGPQVTLAGLLNAIDGL-LCCCGD 323
+ + + C I + ++ K D A ++ +A LL +D L L G
Sbjct: 277 EIFEEAKQIAP---CLIFMDEIDAITPKRDGGAQREMEKRI-VAQLLTLMDELTLEKTGG 332
Query: 324 EKITVF-TTNYKDRIDPALLRAGRMDRHINLSYCT----FSTFKQLAANY-LDINDHDLY 377
+ + V TN D +D AL RAGR DR I L+ S K + N L+ +H Y
Sbjct: 333 KPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRISILKAMTKNIKLENGEHFNY 392
Query: 378 CHIEKL 383
+ KL
Sbjct: 393 RELSKL 398
Score = 122 (48.0 bits), Expect = 0.00071, P = 0.00071
Identities = 46/183 (25%), Positives = 82/183 (44%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYN------LNLSVVTSDSSLE 262
E Y K+G G L++GPPG GK+ L A+AN + + LN V S+ ++
Sbjct: 546 ELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVR 605
Query: 263 YLL--LHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCC 320
+ I+ +++D + R++ + S R + LL +DGL
Sbjct: 606 QVFQRARASTPCIIFFDELDALVP--RRDTSMSES---SSR----VVNTLLTELDGL--- 653
Query: 321 CGDEK--ITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYC 378
D K + TN D IDPA+LR GR+D+ + + T ++ + ++ L+
Sbjct: 654 -NDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHA 712
Query: 379 HIE 381
+++
Sbjct: 713 NVD 715
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 57/186 (30%), Positives = 82/186 (44%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSS--LEYLLL 266
E Y G RG LLYGPPG GK+++ A+A + N++ V S S E L
Sbjct: 217 EIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAPSVVSGMSGESEKKLR 276
Query: 267 HVPNRSILVVEDIDCSIKLQNRES--QKGDEPADSYRGPQVTLAGLLNAIDGL-LCCCGD 323
+ + + C I + ++ K D A ++ +A LL +D L L G
Sbjct: 277 EIFEEAKQIAP---CLIFMDEIDAITPKRDGGAQREMEKRI-VAQLLTLMDELTLEKTGG 332
Query: 324 EKITVF-TTNYKDRIDPALLRAGRMDRHINLSYCT----FSTFKQLAANY-LDINDHDLY 377
+ + V TN D +D AL RAGR DR I L+ S K + N L+ +H Y
Sbjct: 333 KPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRISILKAMTKNIKLENGEHFNY 392
Query: 378 CHIEKL 383
+ KL
Sbjct: 393 RELSKL 398
Score = 122 (48.0 bits), Expect = 0.00071, P = 0.00071
Identities = 46/183 (25%), Positives = 82/183 (44%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYN------LNLSVVTSDSSLE 262
E Y K+G G L++GPPG GK+ L A+AN + + LN V S+ ++
Sbjct: 546 ELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVR 605
Query: 263 YLL--LHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCC 320
+ I+ +++D + R++ + S R + LL +DGL
Sbjct: 606 QVFQRARASTPCIIFFDELDALVP--RRDTSMSES---SSR----VVNTLLTELDGL--- 653
Query: 321 CGDEK--ITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYC 378
D K + TN D IDPA+LR GR+D+ + + T ++ + ++ L+
Sbjct: 654 -NDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHA 712
Query: 379 HIE 381
+++
Sbjct: 713 NVD 715
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 138 (53.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 46/151 (30%), Positives = 69/151 (45%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVTSDSS--LEY 263
R E Y +G + RG LL+GPPG GK+ L A+A ++ I + + + S S E
Sbjct: 284 RHPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGESEQ 343
Query: 264 LLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGD 323
L + ++ V C + + ++ S + +A LL +D L
Sbjct: 344 KLRELFEQA---VSSAPCILFIDEIDAITPKREIASKDMERRIVAQLLTCMDDLNNVAAT 400
Query: 324 EKITVF-TTNYKDRIDPALLRAGRMDRHINL 353
++ V TN D +DPAL RAGR DR I L
Sbjct: 401 ARVLVIGATNRPDSLDPALRRAGRFDREICL 431
Score = 124 (48.7 bits), Expect = 0.00045, P = 0.00045
Identities = 46/149 (30%), Positives = 71/149 (47%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYN------LNLSVVTSDSSLE 262
+ +R +G V G LL GPPG GK+ L A+AN + + LN+ V S+ ++
Sbjct: 604 DQFRVLGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVR 663
Query: 263 YLLLHVPNRSILVV--EDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCC 320
+ N + V+ +++D L R S + E S R + LL +DGL
Sbjct: 664 QVFQRAKNSAPCVIFFDEVDA---LCPRRSAR--ETGASVR----VVNQLLTEMDGLET- 713
Query: 321 CGDEKITVFTTNYKDRIDPALLRAGRMDR 349
+ + TN D IDPA+LR GR+D+
Sbjct: 714 -RQQVFIMAATNRPDIIDPAILRPGRLDK 741
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 137 (53.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 47/156 (30%), Positives = 76/156 (48%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVT--SDS 259
R + ++ IG RG L+YGPPGTGK+ + A+AN + +N +S + S+S
Sbjct: 246 RHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESES 305
Query: 260 SLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGL 317
+L S I+ +++ID SI RE G+ + ++ LL +DG+
Sbjct: 306 NLRKAFEEAEKNSPAIIFIDEID-SIA-PKREKTNGEVE-------RRVVSQLLTLMDGM 356
Query: 318 LCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
+ + TN + IDPAL R GR DR +++
Sbjct: 357 KA--RSNVVVMAATNRPNSIDPALRRFGRFDREVDI 390
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 45/152 (29%), Positives = 72/152 (47%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE + +G +G L+YGPPGTGK+ L A A L + + D +
Sbjct: 204 KEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV 263
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLC 319
+ L SI+ ++++D + + +S+K + R Q T+ LLN +DG
Sbjct: 264 RDAFALAKEKAPSIIFIDELDAT-GTKRFDSEKAGD-----REVQRTMLELLNQLDGFQP 317
Query: 320 CCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
+ + TN D +DPALLR+GR+D+ I
Sbjct: 318 --NTQVKVIAATNRVDILDPALLRSGRLDQKI 347
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 72/261 (27%), Positives = 118/261 (45%)
Query: 144 LVHVLEMAKMFKDRNRIVRFHTIRHDRWSSSGVN---LDHP-MTFGTLVMDGDLKETVLN 199
L +L+ AK + R + R + R R +G+ L+ P +++ + + +LK +
Sbjct: 415 LCSLLKAAKFARGRTHLERVNDARK-RIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQ 473
Query: 200 DLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANY--MNY-DIYNLNL-SVV 255
+ ++ E + + G G LLYGPPG K+ + A+A+ MN+ + L S
Sbjct: 474 AVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIARALASEAKMNFLAVKGPELFSKW 533
Query: 256 TSDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAID 315
DS E + + +R+ V I ++ S +G E + +V LA LL +D
Sbjct: 534 VGDS--EKAIRDLFSRARQVAPTIVFFDEIDAVGSSRGSEKSSGV-SDRV-LAQLLTELD 589
Query: 316 GLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSY-CTFSTFKQLAANYLDINDH 374
GL I + TN D++D ALLR GR+DR I + C + L +
Sbjct: 590 GLEK--SSRVILLAATNRPDQLDSALLRPGRLDRAIYVGLPCEVTRRAILEMRTKKMKFD 647
Query: 375 DLYCHIEKLMEKVK-VSPAEV 394
D I+KL+EK S AE+
Sbjct: 648 DTVRTIDKLVEKTSGYSGAEL 668
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 51/183 (27%), Positives = 86/183 (46%)
Query: 182 MTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMAN 241
+TF + + KE ++ +D F + ++ + K+G +G LL G PGTGK+ L A+A
Sbjct: 155 VTFDDVAGIEEAKEELIEIVD-FLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAG 213
Query: 242 YMNYDIYNLNLS------VVTSDSSLEYLL----LHVPNRSILVVEDIDCSIKLQNRESQ 291
N ++++ S V S + + H P I+ V++ID + +
Sbjct: 214 EANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAP--CIIFVDEIDAVGRHRGIGLG 271
Query: 292 KGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
G++ + TL LL +DG + + + TN D +DPALLR GR DR +
Sbjct: 272 GGNDEREQ------TLNQLLVEMDGFES--NEGVVIIAATNRPDVLDPALLRPGRFDRQV 323
Query: 352 NLS 354
+S
Sbjct: 324 TIS 326
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 51/183 (27%), Positives = 86/183 (46%)
Query: 182 MTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMAN 241
+TF + + KE ++ +D F + ++ + K+G +G LL G PGTGK+ L A+A
Sbjct: 155 VTFDDVAGIEEAKEELIEIVD-FLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAG 213
Query: 242 YMNYDIYNLNLS------VVTSDSSLEYLL----LHVPNRSILVVEDIDCSIKLQNRESQ 291
N ++++ S V S + + H P I+ V++ID + +
Sbjct: 214 EANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAP--CIIFVDEIDAVGRHRGIGLG 271
Query: 292 KGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
G++ + TL LL +DG + + + TN D +DPALLR GR DR +
Sbjct: 272 GGNDEREQ------TLNQLLVEMDGFES--NEGVVIIAATNRPDVLDPALLRPGRFDRQV 323
Query: 352 NLS 354
+S
Sbjct: 324 TIS 326
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 55/199 (27%), Positives = 95/199 (47%)
Query: 168 HDRWSSSGVNLDHPMTFGTLVMDGDLKETVLNDLDCFR---RGKEYYRKIGKVWKRGYLL 224
+++ S N D P + T G L+ + D + E ++ + RG LL
Sbjct: 259 YNQGSEETQNFDGPPSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLL 318
Query: 225 YGPPGTGKSSLIAAMANYMNYDIYNLN-LSVV-----TSDSSLEYLL----LHVPNRSIL 274
YGPPGTGK+ ++ A+A N ++ ++ SVV ++S L + H P SI+
Sbjct: 319 YGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQP--SII 376
Query: 275 VVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYK 334
+++ID L + ++ E A+S +A LL +DG+ G + + + TN
Sbjct: 377 FIDEIDA---LAPKRTEDVSE-AESR-----AVATLLTLLDGM-ANAG-KVVVIAATNRP 425
Query: 335 DRIDPALLRAGRMDRHINL 353
+ ID AL R GR+++ I +
Sbjct: 426 NSIDEALRRPGRLEKEIEI 444
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 47/156 (30%), Positives = 76/156 (48%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVT--SDS 259
R + ++ IG RG L+YGPPGTGK+ + A+AN + +N +S + S+S
Sbjct: 245 RHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESES 304
Query: 260 SLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGL 317
+L S I+ +++ID SI RE G+ + ++ LL +DG+
Sbjct: 305 NLRKAFEEAEKNSPAIIFIDEID-SIA-PKREKTNGEVE-------RRVVSQLLTLMDGM 355
Query: 318 LCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
+ + TN + IDPAL R GR DR +++
Sbjct: 356 KA--RSNVVVMAATNRPNSIDPALRRFGRFDREVDV 389
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 45/150 (30%), Positives = 75/150 (50%)
Query: 209 EYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSLEYL 264
E + + G +G L +GPPGTGK+ L A+AN + + ++ LS+ +S E
Sbjct: 521 EKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGES--ESN 578
Query: 265 LLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDE 324
+ + +++ + +L + +G DS G +V + LL +DG+ +
Sbjct: 579 VRDIFDKARAAAPCVVFLDELDSIAKARGASAGDSGGGDRV-VNQLLTEMDGV-----NS 632
Query: 325 KITVFT---TNYKDRIDPALLRAGRMDRHI 351
K VF TN D+IDPAL+R GR+D+ I
Sbjct: 633 KKNVFVIGATNRPDQIDPALMRPGRLDQLI 662
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 134 (52.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 52/181 (28%), Positives = 83/181 (45%)
Query: 182 MTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMAN 241
+TF + + KE + ++ R K++ + GK+ K G LL GPPGTGK+ L A+A
Sbjct: 154 VTFHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPK-GCLLIGPPGTGKTLLAKAIAG 212
Query: 242 YMNYDIYNLNLS------VVTSDSSLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKG 293
++++ S V S + + + ++ +++ID R G
Sbjct: 213 EAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAV----GRHRGVG 268
Query: 294 DEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
+ R + TL LL +DG + I + TN D +DPALLR GR DR I +
Sbjct: 269 FGGGNDER--EQTLNQLLVEMDGFEA--NEGVIIIAATNRPDVLDPALLRPGRFDRQITI 324
Query: 354 S 354
S
Sbjct: 325 S 325
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 134 (52.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 52/178 (29%), Positives = 80/178 (44%)
Query: 183 TFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANY 242
TF + + KE V +D + R ++K+G G L+ GPPGTGK+ L A+A
Sbjct: 154 TFSDVAGCDEAKEDVKELVD-YLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGE 212
Query: 243 MNYDIYNLNLS------VVTSDSSLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKGD 294
+ ++ S V S + + S I+ +++ID + Q+G
Sbjct: 213 AKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGR------QRGA 266
Query: 295 EPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFT-TNYKDRIDPALLRAGRMDRHI 351
+ + TL +L +DG G+E I V TN D +DPALLR GR DR +
Sbjct: 267 GVGGGHDEREQTLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGRFDRQV 321
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 134 (52.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 52/178 (29%), Positives = 80/178 (44%)
Query: 183 TFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANY 242
TF + + KE V +D + R ++K+G G L+ GPPGTGK+ L A+A
Sbjct: 154 TFSDVAGCDEAKEDVKELVD-YLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGE 212
Query: 243 MNYDIYNLNLS------VVTSDSSLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKGD 294
+ ++ S V S + + S I+ +++ID + Q+G
Sbjct: 213 AKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGR------QRGA 266
Query: 295 EPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFT-TNYKDRIDPALLRAGRMDRHI 351
+ + TL +L +DG G+E I V TN D +DPALLR GR DR +
Sbjct: 267 GVGGGHDEREQTLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGRFDRQV 321
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 135 (52.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 54/190 (28%), Positives = 83/190 (43%)
Query: 204 FRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLS------VVTS 257
F + + Y +G +G LL GPPGTGK+ L A A +++ S V
Sbjct: 340 FLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVG 399
Query: 258 DSSLEYLLLHVPNR--SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAID 315
S + +L SI+ +++ID + + R G++ +S TL LL +D
Sbjct: 400 PSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGNDERES------TLNQLLVEMD 453
Query: 316 GLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLD-IN-D 373
G G + + TN D +D ALLR GR DR I + Q+ YL I D
Sbjct: 454 GFGTTAG--VVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKKIKLD 511
Query: 374 HDLYCHIEKL 383
H+ + ++L
Sbjct: 512 HEPSYYSQRL 521
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 47/156 (30%), Positives = 76/156 (48%)
Query: 208 KEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVTSDSSL-- 261
KE ++ +G +G +LYGPPGTGK+ L A A L + + D +
Sbjct: 202 KEKFKNLGIHPPKGVILYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLV 261
Query: 262 --EYLLLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLC 319
+ L +I+ ++++D +I + +S+K + R Q T+ LLN ++G
Sbjct: 262 RDAFALAKEKAPAIIFIDELD-AIGTKRFDSEKAGD-----REVQRTMLELLNQLNGF-S 314
Query: 320 CCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSY 355
D K+ + TN D I PALLR+GR+DR I +
Sbjct: 315 STADIKV-IAATNRVD-ILPALLRSGRLDRKIEFPH 348
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 134 (52.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 49/157 (31%), Positives = 77/157 (49%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVT--SDS 259
R + ++ IG +G LLYGPPG GK+ + A+AN + +N +S + S+S
Sbjct: 223 RHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANETGAFFFLINGPEIMSKLAGESES 282
Query: 260 SLEYLLLHVPNR--SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGL 317
+L SI+ +++ID SI RE +G+ + ++ LL +DGL
Sbjct: 283 NLRKAFEEAEKNAPSIIFIDEID-SIA-PKREKTQGEVE-------RRIVSQLLTLMDGL 333
Query: 318 LCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLS 354
I + TN + IDPAL R GR DR I+++
Sbjct: 334 KSRA--HVIVMGATNRPNSIDPALRRFGRFDREIDIT 368
Score = 132 (51.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 54/171 (31%), Positives = 84/171 (49%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN 251
+L+ETV ++ E +RK G +G L YGPPG GK+ L A+AN + ++
Sbjct: 486 ELRETVQYPVE----HPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 541
Query: 252 ----LSVVTSDSSLEYLLLHVPNRS----ILVVEDIDCSIKLQNRESQKGDEPADSYRGP 303
L++ +S L R +L +++D SI ++R S +GD G
Sbjct: 542 GPELLTMWFGESEANVRELFDKARQAAPCVLFFDELD-SIA-RSRGSSQGDAGG---AGD 596
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVF---TTNYKDRIDPALLRAGRMDRHI 351
+V + +L +DG+ + K VF TN D IDPA+LR GR+D+ I
Sbjct: 597 RV-INQILTEMDGM-----NAKKNVFIIGATNRPDIIDPAILRPGRLDQLI 641
Score = 39 (18.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 165 TIRHDRWSSSGVNLDHPMTFGTLVMDGDLKETVL 198
TI + S V DH T TL L+ETV+
Sbjct: 434 TISAEILESMSVTQDHFRTALTLSNPSALRETVV 467
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 133 (51.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 51/181 (28%), Positives = 82/181 (45%)
Query: 182 MTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMAN 241
+TFG V D + L ++ F + + Y +G +G LL GPPGTGK+ L A+A
Sbjct: 247 VTFGD-VAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 305
Query: 242 YMNYDIYN------LNLSVVTSDSSLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKG 293
++ + L V S + L +++ I+ +++ID R+ G
Sbjct: 306 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV----GRQRGAG 361
Query: 294 DEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFT-TNYKDRIDPALLRAGRMDRHIN 352
+ R + T+ LL +DG G+ + V TN D +D ALLR GR DR +
Sbjct: 362 MGGGNDER--EQTINQLLTEMDGF---SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 416
Query: 353 L 353
+
Sbjct: 417 V 417
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 133 (51.9 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 45/156 (28%), Positives = 76/156 (48%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVT--SDS 259
R + ++ IG +G L+YGPPGTGK+ + A+AN + +N +S + S+S
Sbjct: 236 RHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESES 295
Query: 260 SLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGL 317
+L S I+ +++ID SI R+ G+ + ++ LL +DG+
Sbjct: 296 NLRKAFEEAEKNSPSIIFIDEID-SIA-PKRDKTNGEVE-------RRVVSQLLTLMDGM 346
Query: 318 LCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
+ + TN + IDPAL R GR DR +++
Sbjct: 347 KA--RSNVVVIAATNRPNSIDPALRRFGRFDREVDI 380
Score = 130 (50.8 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 52/171 (30%), Positives = 84/171 (49%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN 251
+LKETV + + Y+K G +G L +GPPGTGK+ L A+A ++ + ++
Sbjct: 499 ELKETV--EYPVLH--PDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVK 554
Query: 252 ----LSVV--TSDSSLEYLL--LHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGP 303
LS+ S+S++ + +++ ++++D K R GD S R
Sbjct: 555 GPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKA--RGGSHGDAGGASDR-- 610
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVFT---TNYKDRIDPALLRAGRMDRHI 351
+ LL +DG+ + K VF TN D+IDPALLR GR+D+ I
Sbjct: 611 --VVNQLLTEMDGM-----NAKKNVFVIGATNRPDQIDPALLRPGRLDQLI 654
Score = 48 (22.0 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 21/100 (21%), Positives = 35/100 (35%)
Query: 384 MEKVKVSPAEVAGELMKAKGSKTSLEDFITYLXXXXXXXXXXXTAPPLASNVDGNRPEPQ 443
+ K+K +V E + K + ED + Y+ TA S+ + R E
Sbjct: 720 INKIKEEKEKVKTEDVDMKVDEVEEEDPVPYITRAHFEEAMK-TAKRSVSDAELRRYESY 778
Query: 444 ENGNNISKSGVQDQSSHTETEAADMGNVGGYSVKAEFANI 483
S+ + A D G+ G + A F N+
Sbjct: 779 AQQLQASRGQFSSFRFNENAGATDNGSAAGANSGAAFGNV 818
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 133 (51.9 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 45/156 (28%), Positives = 76/156 (48%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVT--SDS 259
R + ++ IG +G L+YGPPGTGK+ + A+AN + +N +S + S+S
Sbjct: 236 RHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESES 295
Query: 260 SLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGL 317
+L S I+ +++ID SI R+ G+ + ++ LL +DG+
Sbjct: 296 NLRKAFEEAEKNSPSIIFIDEID-SIA-PKRDKTNGEVE-------RRVVSQLLTLMDGM 346
Query: 318 LCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
+ + TN + IDPAL R GR DR +++
Sbjct: 347 KA--RSNVVVIAATNRPNSIDPALRRFGRFDREVDI 380
Score = 130 (50.8 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 52/171 (30%), Positives = 84/171 (49%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN 251
+LKETV + + Y+K G +G L +GPPGTGK+ L A+A ++ + ++
Sbjct: 499 ELKETV--EYPVLH--PDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVK 554
Query: 252 ----LSVV--TSDSSLEYLL--LHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGP 303
LS+ S+S++ + +++ ++++D K R GD S R
Sbjct: 555 GPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKA--RGGSHGDAGGASDR-- 610
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVFT---TNYKDRIDPALLRAGRMDRHI 351
+ LL +DG+ + K VF TN D+IDPALLR GR+D+ I
Sbjct: 611 --VVNQLLTEMDGM-----NAKKNVFVIGATNRPDQIDPALLRPGRLDQLI 654
Score = 48 (22.0 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 21/100 (21%), Positives = 35/100 (35%)
Query: 384 MEKVKVSPAEVAGELMKAKGSKTSLEDFITYLXXXXXXXXXXXTAPPLASNVDGNRPEPQ 443
+ K+K +V E + K + ED + Y+ TA S+ + R E
Sbjct: 720 INKIKEEKEKVKTEDVDMKVDEVEEEDPVPYITRAHFEEAMK-TAKRSVSDAELRRYESY 778
Query: 444 ENGNNISKSGVQDQSSHTETEAADMGNVGGYSVKAEFANI 483
S+ + A D G+ G + A F N+
Sbjct: 779 AQQLQASRGQFSSFRFNENAGATDNGSAAGANSGAAFGNV 818
>FB|FBgn0033564 [details] [associations]
symbol:Pex6 "Peroxin 6" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:AE013599
GO:GO:0005524 GO:GO:0007031 HSSP:Q01853 eggNOG:COG0464
GO:GO:0017111 KO:K13339 GeneTree:ENSGT00550000074953
UniGene:Dm.6792 EMBL:AY058375 RefSeq:NP_001027403.1
RefSeq:NP_001163114.1 SMR:Q9V5R2 EnsemblMetazoa:FBtr0100498
EnsemblMetazoa:FBtr0301705 GeneID:3772165 KEGG:dme:Dmel_CG11919
UCSC:CG11919-RA FlyBase:FBgn0033564 InParanoid:Q9V5R2 OMA:KANIFLY
OrthoDB:EOG4DR7T7 NextBio:852681 Uniprot:Q9V5R2
Length = 897
Score = 134 (52.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 54/165 (32%), Positives = 81/165 (49%)
Query: 214 IGKVWKR-GYLLYGPPGTGKSSLIAAMANYMNYDIYN------LNLSVVTSDSSLEYLLL 266
+GK +R G LLYGPPGTGK+ + A+A N + LN+ V S+ ++ +
Sbjct: 642 MGKNLRRSGILLYGPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVREVFS 701
Query: 267 HVPNRS--ILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDE 324
+ + +L ++++D S+ NR GD R ++ LL +DG+ GD
Sbjct: 702 RARSAAPCVLFLDELD-SLA-PNR-GVAGDSGGVMDR----VVSQLLAEMDGM--SDGDT 752
Query: 325 KITVF---TTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAA 366
+F TN D IDPALLR GR D+ + C ST + AA
Sbjct: 753 SKPIFILAATNRPDLIDPALLRPGRFDKLFYVGPC--STAEDKAA 795
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 49/156 (31%), Positives = 76/156 (48%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVT--SDS 259
R + ++ IG +G LLYGPPG+GK+ + A+AN + +N +S + S+S
Sbjct: 228 RHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESES 287
Query: 260 SLEYLLLHVPNR--SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGL 317
+L SI+ +++ID SI RE G+ + ++ LL +DGL
Sbjct: 288 NLRKAFEEAEKNAPSIIFIDEID-SIA-PKREKTNGEVE-------RRIVSQLLTLMDGL 338
Query: 318 LCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
I + TN + IDPAL R GR DR I++
Sbjct: 339 KSRA--HVIVMGATNRPNSIDPALRRFGRFDREIDI 372
Score = 121 (47.7 bits), Expect = 0.00088, P = 0.00088
Identities = 53/171 (30%), Positives = 78/171 (45%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN 251
+L+ETV ++ E + K G +G L YGPPG GK+ L A+AN + ++
Sbjct: 491 ELQETVQYPVE----HPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 546
Query: 252 ----LSVVTSDSSLEYLLLHVPNRS----ILVVEDIDCSIKLQNRESQKGDEPADSYRGP 303
L++ +S + R +L +++D SI Q GD + R
Sbjct: 547 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELD-SIATQRGGGSGGDGGGAADR-- 603
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVF---TTNYKDRIDPALLRAGRMDRHI 351
L LL +DG+ + K TVF TN D ID ALLR GR+D+ I
Sbjct: 604 --VLNQLLTEMDGM-----NAKKTVFIIGATNRPDIIDSALLRPGRLDQLI 647
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 49/156 (31%), Positives = 76/156 (48%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVT--SDS 259
R + ++ IG +G LLYGPPG+GK+ + A+AN + +N +S + S+S
Sbjct: 228 RHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESES 287
Query: 260 SLEYLLLHVPNR--SILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGL 317
+L SI+ +++ID SI RE G+ + ++ LL +DGL
Sbjct: 288 NLRKAFEEAEKNAPSIIFIDEID-SIA-PKREKTNGEVE-------RRIVSQLLTLMDGL 338
Query: 318 LCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
I + TN + IDPAL R GR DR I++
Sbjct: 339 KSRA--HVIVMGATNRPNSIDPALRRFGRFDREIDI 372
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 51/168 (30%), Positives = 78/168 (46%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN 251
+L+ETV ++ E + K G +G L YGPPG GK+ L A+AN + ++
Sbjct: 491 ELQETVQYPVE----HPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 546
Query: 252 ----LSVVTSDSSLEYL-LLHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVT 306
L++ +S + +S V D +L + +Q+G+ D+
Sbjct: 547 GPELLTMWFGESEANVREIFDKARQSAPCVLFFD---ELDSIATQRGNSAGDAGGAADRV 603
Query: 307 LAGLLNAIDGLLCCCGDEKITVF---TTNYKDRIDPALLRAGRMDRHI 351
L LL +DG+ + K TVF TN D ID ALLR GR+D+ I
Sbjct: 604 LNQLLTEMDGM-----NAKKTVFIIGATNRPDIIDSALLRPGRLDQLI 646
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 131 (51.2 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 51/178 (28%), Positives = 80/178 (44%)
Query: 183 TFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANY 242
TF + + KE V ++ R + + GK+ K G L+ GPPGTGK+ L A+A
Sbjct: 150 TFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPK-GVLMVGPPGTGKTLLAKAIAGE 208
Query: 243 MNYDIYNLNLS------VVTSDSSLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKGD 294
+ ++ S V S + + + I+ +++ID + Q+G
Sbjct: 209 AKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGR------QRGA 262
Query: 295 EPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITVFT-TNYKDRIDPALLRAGRMDRHI 351
+ + TL +L +DG G+E I V TN D +DPALLR GR DR +
Sbjct: 263 GLGGGHDEREQTLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGRFDRQV 317
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 131 (51.2 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 56/188 (29%), Positives = 86/188 (45%)
Query: 176 VNLDHP-MTFGTLVMDGDLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSS 234
VN + P + F + + KE V +D F + E Y K+G +G LL GPPGTGK+
Sbjct: 168 VNSEKPKVKFSDVAGVEEAKEEVKEIVD-FLKYPERYIKLGAKIPKGLLLVGPPGTGKTL 226
Query: 235 LIAAMANYMNYDIYNLNLS------VVTSDSSLEYLLLHVPNRS--ILVVEDIDCSIKLQ 286
L A+A + ++++ S V S + L + + I+ +++ID K +
Sbjct: 227 LAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDAIGKSR 286
Query: 287 NRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEK---ITVFTTNYKDRIDPALLR 343
G + R + TL LL +DG G E I + TN + +D ALLR
Sbjct: 287 AASGMMG---GNDER--EQTLNQLLAEMDGF----GTESSPVIVLAATNRPEVLDAALLR 337
Query: 344 AGRMDRHI 351
GR DR +
Sbjct: 338 PGRFDRQV 345
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 132 (51.5 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 53/185 (28%), Positives = 82/185 (44%)
Query: 194 KETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLS 253
KE ++ + F + Y K+G RG +L GPPGTGK+ L A A +++ S
Sbjct: 296 KEEIMEFVK-FLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGS 354
Query: 254 ------VVTSDSSLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKGDEPADSYRGPQV 305
V S + L + I+ V++ID K + G++ ++
Sbjct: 355 EFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNGRMGGNDEREN------ 408
Query: 306 TLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLA 365
TL LL +DG D + + TN D +D ALLR GR DRHI++ KQ+
Sbjct: 409 TLNQLLVEMDGFDTT--DHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIF 466
Query: 366 ANYLD 370
+L+
Sbjct: 467 KVHLN 471
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 132 (51.5 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 53/185 (28%), Positives = 82/185 (44%)
Query: 194 KETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLS 253
KE ++ + F + Y K+G RG +L GPPGTGK+ L A A +++ S
Sbjct: 296 KEEIMEFVK-FLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGS 354
Query: 254 ------VVTSDSSLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKGDEPADSYRGPQV 305
V S + L + I+ V++ID K + G++ ++
Sbjct: 355 EFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNGRMGGNDEREN------ 408
Query: 306 TLAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLA 365
TL LL +DG D + + TN D +D ALLR GR DRHI++ KQ+
Sbjct: 409 TLNQLLVEMDGFDTT--DHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIF 466
Query: 366 ANYLD 370
+L+
Sbjct: 467 KVHLN 471
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 132 (51.5 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 45/156 (28%), Positives = 76/156 (48%)
Query: 206 RGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN----LSVVT--SDS 259
R + ++ IG RG L+YGPPGTGK+ + A+AN + +N +S + S+S
Sbjct: 235 RHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESES 294
Query: 260 SLEYLLLHVPNRS--ILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGL 317
+L + I+ +++ID SI R+ G+ + ++ LL +DG+
Sbjct: 295 NLRKAFEEAEKNAPAIIFIDEID-SIA-PKRDKTNGEVE-------RRVVSQLLTLMDGM 345
Query: 318 LCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHINL 353
+ + TN + IDPAL R GR DR +++
Sbjct: 346 KA--RSNVVVIAATNRPNSIDPALRRFGRFDREVDI 379
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 52/171 (30%), Positives = 83/171 (48%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN 251
+LKETV + + Y K G +G L YGPPGTGK+ L A+A ++ + ++
Sbjct: 498 ELKETV--EYPVLH--PDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVK 553
Query: 252 ----LSVV--TSDSSLEYLL--LHVPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGP 303
LS+ S+S++ + +++ ++++D K R GD S R
Sbjct: 554 GPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKA--RGGSLGDAGGASDR-- 609
Query: 304 QVTLAGLLNAIDGLLCCCGDEKITVFT---TNYKDRIDPALLRAGRMDRHI 351
+ LL +DG+ + K VF TN D+IDPA+LR GR+D+ I
Sbjct: 610 --VVNQLLTEMDGM-----NAKKNVFVIGATNRPDQIDPAILRPGRLDQLI 653
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 131 (51.2 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 46/165 (27%), Positives = 75/165 (45%)
Query: 192 DLKETVLNDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLN 251
D + L ++ + R + + ++G +G LL GPPGTGK+ L A+A ++
Sbjct: 233 DEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSC- 291
Query: 252 LSVVTSDSSLEYLLLHVPNRSI--LVVEDIDCS---IKLQNRESQKGDEPADSYRGPQVT 306
S S E + + V R + L CS I + ++ G + ++T
Sbjct: 292 -----SGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRNPKDQQYMKMT 346
Query: 307 LAGLLNAIDGLLCCCGDEKITVFTTNYKDRIDPALLRAGRMDRHI 351
L +L +DG + I V TN+ + +D AL+R GR DRHI
Sbjct: 347 LNQMLVELDGFKQ--NEGIIVVAATNFPESLDKALVRPGRFDRHI 389
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 130 (50.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 48/148 (32%), Positives = 66/148 (44%)
Query: 212 RKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVT---SDSSLEYLLLHV 268
R +G W RG LLYGPPGTGK+SL+ A+ + + L+ V + S + L
Sbjct: 49 RTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAF 108
Query: 269 PNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAG-LLNAIDGLLCCCGDEKIT 327
S V D I + E D+ R V +A L +D ++
Sbjct: 109 AEASSHAVSDKPSVIFID--EIDVLCPRRDARREQDVRIASQLFTLMDSNKPSSSAPRVV 166
Query: 328 VF-TTNYKDRIDPALLRAGRMDRHINLS 354
V +TN D IDPAL RAGR D + +S
Sbjct: 167 VVASTNRVDAIDPALRRAGRFDALVEVS 194
>POMBASE|SPAC1834.11c [details] [associations]
symbol:sec18 "secretory pathway protein Sec18
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 PomBase:SPAC1834.11c Pfam:PF02359 GO:GO:0005524
GO:GO:0005737 GO:GO:0006886 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 eggNOG:COG0464 GO:GO:0006888 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042144 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 PIR:T50122 RefSeq:NP_594690.1
ProteinModelPortal:Q9P7Q4 STRING:Q9P7Q4 EnsemblFungi:SPAC1834.11c.1
GeneID:2542410 KEGG:spo:SPAC1834.11c OrthoDB:EOG4PVS6W
NextBio:20803469 Uniprot:Q9P7Q4
Length = 792
Score = 131 (51.2 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 66/212 (31%), Positives = 98/212 (46%)
Query: 213 KIGKVWKRGYLLYGPPGTGKSSL---IAAMANYMNYDIYN----LNLSVVTSDSSLEYLL 265
K+G +G LLYGPPGTGK+ + I M N I N LN V S+ ++ L
Sbjct: 298 KLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEENVRKLF 357
Query: 266 LHVPNRSILVVEDIDCSI----KLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCC 321
E+ I +L ++G D+ G QV + LL +DG+
Sbjct: 358 ADAEREYRDRGEESGLHIIIFDELDAICKKRGSSGGDTGVGDQV-VNQLLAKMDGVDQL- 415
Query: 322 GDEKITVFTTNYKDRIDPALLRAGRMDRHINLS----YCTFSTFK----QLAANYLDIND 373
+ + + TN KD ID ALLR GR++ H+ +S + K ++A+N + ND
Sbjct: 416 -NNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILEND 474
Query: 374 HDLYCHIEKLMEKVK-VSPAEVAGELMKAKGS 404
D+ E+L K S AE+AG L+K+ S
Sbjct: 475 VDM----EELASLTKNFSGAEIAG-LIKSASS 501
>GENEDB_PFALCIPARUM|MAL8P1.92 [details] [associations]
symbol:MAL8P1.92 "ATPase, putative"
species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AL844507 RefSeq:XP_001349382.2
ProteinModelPortal:Q8IAX9 EnsemblProtists:MAL8P1.92:mRNA
GeneID:2655443 KEGG:pfa:MAL8P1.92 EuPathDB:PlasmoDB:PF3D7_0814300
Uniprot:Q8IAX9
Length = 1200
Score = 133 (51.9 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 62/203 (30%), Positives = 97/203 (47%)
Query: 211 YRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYM--NYDIYN----LNLSVVTSDSSLEYL 264
Y+ +G G LLYGPPG GK+ L A++N M N+ LN V S+ + +
Sbjct: 702 YKHLGINKSMGILLYGPPGCGKTMLAKAISNEMKANFIAIKGPEILNKYVGESEKKVREI 761
Query: 265 LLH--VPNRSILVVEDIDCSIKLQNRESQKGDEPADSYRGPQVTLAGLLNAIDGLLCCCG 322
+ V ++ ++ID SI + NR + K +D + LL+ +DGL G
Sbjct: 762 FSYASVYKPCLIFFDEID-SICI-NRSNNKSVSASDR------VVNQLLSEMDGLSQREG 813
Query: 323 DEKITVFTTNYKDRIDPALLRAGRMDRHINLSYCTFS----TFKQLAANYLDINDHDLYC 378
+ TTN D ID ALLR+GR D+ I +S + K+L+ N + I+ + +
Sbjct: 814 --VYIIATTNRPDIIDKALLRSGRFDQLIYISLPKYQGRVDILKKLSKN-MPIDKNVRFE 870
Query: 379 HIEKLMEKVKVSPAEVAGELMKA 401
I KL S A++ G L ++
Sbjct: 871 EISKLTRGY--SGADLYGVLRES 891
WARNING: HSPs involving 103 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 600 577 0.00081 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 353
No. of states in DFA: 619 (66 KB)
Total size of DFA: 325 KB (2166 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 47.96u 0.11s 48.07t Elapsed: 00:00:02
Total cpu time: 47.99u 0.11s 48.10t Elapsed: 00:00:02
Start: Fri May 10 10:18:40 2013 End: Fri May 10 10:18:42 2013
WARNINGS ISSUED: 2